BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045814
(427 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYM2|PP393_ARATH Pentatricopeptide repeat-containing protein At5g18950
OS=Arabidopsis thaliana GN=At5g18950 PE=2 SV=2
Length = 483
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/441 (48%), Positives = 301/441 (68%), Gaps = 18/441 (4%)
Query: 1 MGRAPFSVLTILRQNPRNFQNPNTQLRNLSIETKE---------SQQLYTEIAKQVCKIT 51
M R +++ R R +NPNTQ+R+L++E+++ S YTE+AK V I
Sbjct: 1 MSRGQSYLISFFRNRTR--KNPNTQIRSLTVESRDCESKPDEQKSAVSYTEMAKTVSTIM 58
Query: 52 RTKPRWEQTLLSDIPSFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNV 111
R + RW+QTL+SD PSF+F DPLFF E LK QNNVL S+ FF+WL S+Y ++P VS N+
Sbjct: 59 RERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNI 118
Query: 112 LFDSLVEARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFG 171
LF +L++ +A K A FLD+TGF P P LE Y++CL E GL+EEA ++ LK+MG+
Sbjct: 119 LFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISS 178
Query: 172 SIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY-------LIQAFCNDGKVSEGYELLRQ 224
S+ T NS LLGC+K + D W+L+ +++ES + LI+A C+ G VSEGYELL+Q
Sbjct: 179 SVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQ 238
Query: 225 VLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRK 284
L+ GL P + KLIS FCE N+ +SE+LHTM+A N P + Y+++I GLC ++K
Sbjct: 239 GLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKK 298
Query: 285 RLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNS 344
+LEAY +F +LK++GY PD V+YTT+I G C+ GWLG ARK+WFEMI KG+ PNE+ YN
Sbjct: 299 QLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
Query: 345 MIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKG 404
MIHG+ + + + + EML GYG T ++ NT+I G C HG++DEA+ +F+ M++ G
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG 418
Query: 405 IFRDVITYNTLIQGYCKEGKI 425
+ + ITYN LI+G+CKE K+
Sbjct: 419 VTPNAITYNALIKGFCKENKV 439
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 110/292 (37%), Gaps = 45/292 (15%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSP-NPNSLELYIQCLCESGLIEEAFC 159
G S +V+CN + ++AR + S + + I+ LC+ G + E +
Sbjct: 175 GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYE 234
Query: 160 AFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFC 210
+ + G+ + + G +I + ++ H +I + +I+ C
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 211 NDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNF 270
+ K E Y + + + + G P+ + +I FCEK G +L M+ + P+ F
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 271 TYE-----------------------------------EVINGLCKSRKRLEAYRVFNDL 295
Y +I G C K EA+ +F ++
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNM 414
Query: 296 KERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIH 347
E G P+ + Y +I G CK + K++ E+ GL P+ Y +++
Sbjct: 415 SETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%)
Query: 90 IRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFK---VAMDFLDSTGFSPNPNSLELYIQ 146
+ W+ +G PD N + + LV+ + K ++ + G P+ ++ + I+
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 147 CLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG--- 203
LC + + A + G+ KT+ + + G I+ D ++ ++E G
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 204 ------YLIQAFCNDGKVSEGYELLRQVL-EDGLVPENTAFNKLISRFCEKKNFGRVSEL 256
++ FC +G+V + ++++ +DG P+ FN L++ C+ + E+
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 257 LHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCK 316
+ M+ PD +TY VI+GLCK + EA V + + R P+TV Y T+I LCK
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 317 MGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVT 376
+ +A ++ + KG+LP+ T+NS+I G C N A L +EM KG T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 377 YNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
YN LI LC G+ DEA ++ ++M G R VITYNTLI G+CK K
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 185/400 (46%), Gaps = 20/400 (5%)
Query: 43 IAKQVCKITRTKPRWEQTLLSDIPSFNF-NDPLFFREFLK---QQNNVLLSIRFFQWLHS 98
+ K +C+ + +P +L D+PS+ D F ++ ++ ++ ++R + +
Sbjct: 195 LIKALCRAHQLRPAI--LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM-V 251
Query: 99 HYGFSPDLVSCNVLFDSLVEARAFKVAMDFL----DSTGFSPNPNSLELYIQCLCESGLI 154
+G S VS NV+ + + A++F+ + GF P+ + + LC++G +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 155 EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYL 205
+ A + + G + T+NS + G K+ ++ +I L
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
I C + +V E EL R + G++P+ FN LI C +N EL M ++
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
PD FTY +I+ LC K EA + ++ G + Y T+I G CK +A +
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 326 MWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLC 385
++ EM G+ N TYN++I G C+ +E+A +L +M+ +G TYN+L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 386 LHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
G +A + + M G D++TY TLI G CK G++
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYI 145
++ F Q + + GF PD + N L + L +A K A++ +D G+ P+ + I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 146 QCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL 205
LC+ G ++EA ++ + T+N+ + K ++ + +L L G L
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 206 ---------IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSEL 256
IQ C EL ++ G P+ +N LI C K +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 257 LHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCK 316
L M A TY +I+G CK+ K EA +F++++ G ++V Y T+I GLCK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 317 MGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVT 376
+ DA ++ +MI +G P++YTYNS++ +CR ++++A + + M G VT
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 377 YNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
Y TLI+GLC GR + A L + KGI YN +IQG ++ K
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 13/336 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD+ + N + L + K A++ LD + SPN + I LC+ +EEA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQA 208
L G+ + T+NS + G + +L+ ++ G LI +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C+ GK+ E +L+Q+ G +N LI FC+ E+ M + +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+ TY +I+GLCKSR+ +A ++ + + G PD Y +++ C+ G + A +
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
M G P+ TY ++I G C+ +E A +L + + KG T YN +I GL
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 389 RTDEAYHLFEEM-AQKGIFRDVITYNTLIQGYCKEG 423
+T EA +LF EM Q D ++Y + +G C G
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 232 PENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRV 291
PE + +++ R +F + ++L M + T+ +I + + E V
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 292 FN-DLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYC 350
+ + E G PDT Y +++ L L +M G+ P+ T+N +I C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 351 RIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVI 410
R L A + ++M G T+ T++ G G D A + E+M + G +
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 411 TYNTLIQGYCKEGKI 425
+ N ++ G+CKEG++
Sbjct: 261 SVNVIVHGFCKEGRV 275
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 174/334 (52%), Gaps = 12/334 (3%)
Query: 104 PDLVSCNVLFDSL-VEARAFK--VAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
PDLV+ + L + L ++ R + V +D + GF P+ + + LC+SG A
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQAFCN 211
F K++E + S+ ++ + K D L++ D++ LI CN
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
DGK +G ++LR+++ ++P+ F+ LI F ++ EL + M+ R APD T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +I+G CK EA ++F+ + +G PD V Y+ +I+ CK + D +++ E+
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
KGL+PN TYN+++ G+C+ L AK L +EM+ +G + VTY L+ GLC +G +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+A +FE+M + + + YN +I G C K+
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 99 HYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIE 155
YGF PD V+ + + L ++ +A+D ++ + + I LC+ G +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 156 EAFCAFSKLKEMGVFGSIKTWNSALLGC---------IKIDRTDLVWKLYHDLIESGYLI 206
+A F++++ G+ + T++S + G K+ R + + D++ LI
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 207 QAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA 266
F +GK+ E EL +++ G+ P+ +N LI FC++ +++ MV++
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 267 PDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM 326
PD TY +IN CK+++ + R+F ++ +G +P+T+ Y T++ G C+ G L A+++
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 327 WFEMIHKGLLPNEYTY-----------------------------------NSMIHGYCR 351
+ EM+ +G+ P+ TY N +IHG C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 352 IDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVIT 411
+++A L + DKG VTYN +I GLC G EA LF +M + G D T
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 412 YNTLIQGY 419
YN LI+ +
Sbjct: 563 YNILIRAH 570
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 123/235 (52%), Gaps = 8/235 (3%)
Query: 193 WKLYH--DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNF 250
WKL + D I L+ FC +G+VSE L+ +++E P+ + LI+ C K
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK--- 188
Query: 251 GRVSE---LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMY 307
GRVSE L+ MV PD TY V+N LCKS A +F ++ER V Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 308 TTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLD 367
+ VI LCK G DA ++ EM KG+ + TY+S+I G C ++ ++ +EM+
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 368 KGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKE 422
+ VT++ LI G+ EA L+ EM +GI D ITYN+LI G+CKE
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 6/233 (2%)
Query: 197 HDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE- 255
HD+ +I +C K+ + +L + + G P+ F+ L++ FC + GRVSE
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE---GRVSEA 159
Query: 256 --LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHG 313
L+ MV + PD T +INGLC + EA + + + E G+ PD V Y V++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 314 LCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGET 373
LCK G A ++ +M + + + Y+ +I C+ + ++A L EM KG
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 374 TVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
VTY++LI GLC G+ D+ + EM + I DV+T++ LI + KEGK++
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 35/248 (14%)
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
D KV++ +L +++ +P FN+L S K + V M D +T
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMY------------------------ 307
+IN C+ +K L A+ V + GY PDT+ +
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 308 -----------TTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLE 356
+T+I+GLC G + +A + M+ G P+E TY +++ C+ N
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 357 EAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
A L ++M ++ + V Y+ +I LC G D+A LF EM KGI DV+TY++LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 417 QGYCKEGK 424
G C +GK
Sbjct: 288 GGLCNDGK 295
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 29/284 (10%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVA---MDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G +PD ++ N L D + A D + S G P+ + + I C++ +++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSE 217
F ++ G+ + T+N+ +LG FC GK++
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLG--------------------------FCQSGKLNA 438
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVIN 277
EL ++++ G+ P + L+ C+ + E+ M Y +I+
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 278 GLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLP 337
G+C + K +A+ +F L ++G PD V Y +I GLCK G L +A ++ +M G P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 338 NEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLI 381
+++TYN +I + L + L +EM G+ + T +I
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 42/106 (39%)
Query: 320 LGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNT 379
+ DA ++ MI LP +N + R + K M G T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+I C + A+ + + G D IT++TL+ G+C EG++
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRV 156
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 15/337 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSL--ELYIQCLCESGLIEEAF 158
GF+PD ++ L + L + A D P P + I G +++A
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---PKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 159 CAFSKL-KEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQA 208
S + G+ + T+NS + G K L ++ HD+ G L+
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
FC GK+ E Y +L ++ DGL P FN LIS FC++ E+ M + PD
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+T+ +I+GLC+ + A + D+ G V +TV Y T+I+ + G + +ARK+
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM+ +G +E TYNS+I G CR +++A+ L ++ML G+ + ++ N LI GLC G
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+EA +EM +G D++T+N+LI G C+ G+I
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 159/332 (47%), Gaps = 12/332 (3%)
Query: 98 SHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLI 154
+ YG PD+ + N L + +A++ L + G PN S + + C+ G I
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 155 EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YL 205
+EA+ +++ G+ + +N + K R +++ ++ G L
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
I C ++ LLR ++ +G+V +N LI+ F + +L++ MV +
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
D TY +I GLC++ + +A +F + G+ P + +I+GLC+ G + +A +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 326 MWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLC 385
EM+ +G P+ T+NS+I+G CR +E+ + +++ +G TVT+NTL++ LC
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 386 LHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQ 417
G +A L +E + G + T++ L+Q
Sbjct: 681 KGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 32/264 (12%)
Query: 194 KLYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRV 253
K+ L G +++AFC ++ LLR + + G VP + + LI +
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 254 SELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHG 313
+LL M PD T+ +VI GLCK + EA ++ N + RG+ PD + Y +++G
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 314 LCKMGWLGDARKMWFE-----------MIHK---------------------GLLPNEYT 341
LCK+G + A+ +++ +IH G++P+ T
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 342 YNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMA 401
YNS+I+GY + + A + +M +KG +Y L+ G C G+ DEAY++ EM+
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 402 QKGIFRDVITYNTLIQGYCKEGKI 425
G+ + + +N LI +CKE +I
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRI 475
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 155/360 (43%), Gaps = 27/360 (7%)
Query: 67 SFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAM 126
SF+ P + L+ NV S+ F W S G+ VL L FK
Sbjct: 72 SFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKT-- 129
Query: 127 DFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKI 186
+D L IQ + + G++ + S +++ G +L +
Sbjct: 130 --ID-----------RLLIQ-MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNV 175
Query: 187 DRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCE 246
+ +K Y+ ++E L+ C+ + Y++L + + P F ++ FC
Sbjct: 176 YSCEPTFKSYNVVLE--ILVSGNCHKVAANVFYDMLSRKIP----PTLFTFGVVMKAFCA 229
Query: 247 KKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVM 306
LL M P++ Y+ +I+ L K + EA ++ ++ G VPD
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289
Query: 307 YTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEML 366
+ VI GLCK + +A KM M+ +G P++ TY +++G C+I ++ AK L +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 367 DKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQK-GIFRDVITYNTLIQGYCKEGKI 425
V +NTLI G HGR D+A + +M GI DV TYN+LI GY KEG +
Sbjct: 350 KP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 12/296 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G P++ S +L D + A + L+ + G PN I C+ I EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
F ++ G + T+NS + G ++D L D+I G LI A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F G++ E +L+ +++ G + +N LI C + L M+ AP
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
N + +INGLC+S EA ++ RG PD V + ++I+GLC+ G + D M+
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
++ +G+ P+ T+N+++ C+ + +A L E ++ G+ T++ L+ +
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 12/274 (4%)
Query: 98 SHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLI 154
S G P+ V N L + + A++ + G P+ + I LCE I
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 155 EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------L 205
+ A + GV + T+N+ + ++ KL ++++ G L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
I+ C G+V + L ++L DG P N + N LI+ C E MV R
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
PD T+ +INGLC++ + + +F L+ G PDTV + T++ LCK G++ DA
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 326 MWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAK 359
+ E I G +PN T++ ++ + L+ +
Sbjct: 691 LLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 12/334 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P ++ N LF ++ + + +++ + ++S G + + +L + I C C + AF
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G +N+ L G R +L ++E G+ L+ C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+GKVS+ L+ +++E G P + +++ C+ ELL M RN D
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +I+GLCK A+ +FN+++ +G+ D + Y T+I G C G D K+ +MI
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
+ + PN T++ +I + + L EA +L KEM+ +G T+TYN+LI G C R +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
EA + + M KG D++T+N LI GYCK +I
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD V N L + L A++ +D G P +L + LC +G + +A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
++ E G + T+ L K +T L +L D ++ +I
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C DG + + L ++ G + +N LI FC + ++LL M+ R +P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
T+ +I+ K K EA ++ ++ +RG P+T+ Y ++I G CK L +A +M
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
MI KG P+ T+N +I+GYC+ + +++ L +EM +G TVTYNTL+ G C G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ + A LF+EM + + D+++Y L+ G C G++
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 167/339 (49%), Gaps = 12/339 (3%)
Query: 99 HYGFSPDLVSCNVLFDSLV---EARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIE 155
G P L++ N L + L + V +D + TGF PN + + +C+SG
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 156 EAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLI 206
A K++E + ++ + G K D + L++ D+I LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 207 QAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA 266
FCN G+ +G +LLR +++ + P F+ LI F ++ +LL M+ R A
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 267 PDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM 326
P+ TY +I+G CK + EA ++ + + +G PD + + +I+G CK + D ++
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 327 WFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCL 386
+ EM +G++ N TYN+++ G+C+ LE AK+L +EM+ + V+Y L+ GLC
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 387 HGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+G ++A +F ++ + + D+ Y +I G C K+
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 149/329 (45%), Gaps = 14/329 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEA----RAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
GF D+++ N L A K+ D + SPN + + I + G + E
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLRE 351
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQ 207
A ++ + G+ + T+NS + G K +R + ++ +I G LI
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
+C ++ +G EL R++ G++ +N L+ FC+ +L MV+R P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D +Y+ +++GLC + + +A +F +++ D +Y +IHG+C + DA ++
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+ KG+ + YN MI CR D+L +A L ++M ++G+ +TYN LI
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
A L EEM G DV T +I
Sbjct: 592 DDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 41/264 (15%)
Query: 196 YHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE 255
Y D + SG + K + +L R +++ +P FN+L S + K + V
Sbjct: 56 YRDKLSSGLV------GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLA 109
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLC 315
L M ++ A +T +IN C+ RK A+ + + GY PDTV++ T+++GLC
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 316 -------------KM----------------------GWLGDARKMWFEMIHKGLLPNEY 340
+M G + DA + M+ G PNE
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 341 TYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEM 400
TY +++ C+ A L ++M ++ V Y+ +I GLC G D A++LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 401 AQKGIFRDVITYNTLIQGYCKEGK 424
KG D+ITYNTLI G+C G+
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGR 313
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 105/279 (37%), Gaps = 51/279 (18%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G +P+ ++ N L D + + A+ +D S G P+ + + I C++ I++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLI----------------- 200
F ++ GV + T+N+ + G + + ++ KL+ +++
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 201 --ESGYL-------------------------IQAFCNDGKVSEGYELLRQVLEDGLVPE 233
++G L I CN KV + ++L + G+ +
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 234 NTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFN 293
A+N +IS C K + + L M APD TY +I A +
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 294 DLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIH 332
++K G+ D VI+ L G+ K + +M+
Sbjct: 603 EMKSSGFPADVSTVKMVINMLSS----GELDKSFLDMLS 637
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 180/379 (47%), Gaps = 50/379 (13%)
Query: 96 LHSHYGFSPDLVSCNVLFDSLVEAR-----AFKVAMDFLDSTGFSPNPNSLELYIQCLCE 150
L +GF P ++S N + D+ + ++ A V + L+S SPN + + I+ C
Sbjct: 159 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCF 217
Query: 151 SGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIE 201
+G I+ A F K++ G ++ T+N+ + G K+ + D +KL +LI
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 202 SGYLIQAFCNDGKVSE-----------GYEL------------------------LRQVL 226
+I C +G++ E GY L ++L
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 227 EDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRL 286
GL P + LI C+ N R E L M R P+ TY +++G +
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 287 EAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMI 346
EAYRV ++ + G+ P V Y +I+G C G + DA + +M KGL P+ +Y++++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 347 HGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIF 406
G+CR +++EA R+ +EM++KG T+TY++LI G C RT EA L+EEM + G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 407 RDVITYNTLIQGYCKEGKI 425
D TY LI YC EG +
Sbjct: 518 PDEFTYTALINAYCMEGDL 536
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 165/352 (46%), Gaps = 13/352 (3%)
Query: 85 NVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSL 141
N+ +++ F + + G P++V+ N L D + R L S G PN S
Sbjct: 220 NIDVALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 142 ELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIE 201
+ I LC G ++E +++ G T+N+ + G K ++ +++
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 202 SGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGR 252
G LI + C G ++ E L Q+ GL P + L+ F +K
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 253 VSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIH 312
+L M +P TY +ING C + K +A V D+KE+G PD V Y+TV+
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 313 GLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGE 372
G C+ + +A ++ EM+ KG+ P+ TY+S+I G+C +EA L++EML G
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 373 TTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
TY LI C+ G ++A L EM +KG+ DV+TY+ LI G K+ +
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 172/366 (46%), Gaps = 32/366 (8%)
Query: 92 FFQWLHSH-----YGFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLEL 143
F Q L H +G +P +++ L S+ +A AM+FLD G PN +
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 144 YIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLG-CIKIDRTDLVW--------K 194
+ + G + EA+ ++ + G S+ T+N+ + G C+ D +
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 195 LYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVS 254
L D++ ++ FC V E + R+++E G+ P+ ++ LI FCE++
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 255 ELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGL 314
+L M+ PD FTY +IN C +A ++ N++ E+G +PD V Y+ +I+GL
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 315 CKMGWLGDARKMWFEMIHKGLLPNEYTYN---------------SMIHGYCRIDNLEEAK 359
K +A+++ ++ ++ +P++ TY+ S+I G+C + EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 360 RLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGY 419
++ + ML K + YN +I G C G +AY L++EM + G +T L++
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Query: 420 CKEGKI 425
KEGK+
Sbjct: 686 HKEGKV 691
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 166/329 (50%), Gaps = 12/329 (3%)
Query: 101 GFSPDLVSCNVLFDSLV-EARAFKVA--MDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G P+L+S NV+ + L E R +V+ + ++ G+S + + I+ C+ G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
+++ G+ S+ T+ S + K + + + G L+
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F G ++E Y +LR++ ++G P +N LI+ C +L M + +PD
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+Y V++G C+S EA RV ++ E+G PDT+ Y+++I G C+ +A ++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM+ GL P+E+TY ++I+ YC +LE+A +LH EM++KG VTY+ LI GL
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQ 417
RT EA L ++ + +TY+TLI+
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 182/423 (43%), Gaps = 71/423 (16%)
Query: 67 SFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCN-VLFDSLVEARAFK-- 123
S NF LK QN+ L ++F W + H F+ + C + L + + +K
Sbjct: 43 SANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFT---LRCKCITLHILTKFKLYKTA 99
Query: 124 ------VAMDFLDSTGFSPNPNSL-ELYIQCLCESGLIEEAFCAFSKL------------ 164
VA LD S SL E Y C S + + ++S+L
Sbjct: 100 QILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHL 159
Query: 165 -KEMGVFGSIKTWNSALLGCIKIDRT-DLVWKLYHDLIES---------GYLIQAFCNDG 213
+ G + ++N+ L I+ R ++ +++ES LI+ FC G
Sbjct: 160 AQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAG 219
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
+ L ++ G +P +N LI +C+ + +LL +M + P+ +Y
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
VINGLC+ + E V ++ RGY D V Y T+I G CK G A M EM+
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 334 GLLPNEYTYNSMIHGYCRIDN-----------------------------------LEEA 358
GL P+ TY S+IH C+ N + EA
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 359 KRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQG 418
R+ +EM D G+ + VTYN LI G C+ G+ ++A + E+M +KG+ DV++Y+T++ G
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 419 YCK 421
+C+
Sbjct: 460 FCR 462
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLI-SRFCEKKNFGRVSELLHTMVAR 263
+++++ + + ++ G +P ++N ++ + K+N + M+
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 264 NRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDA 323
+P+ FTY +I G C + A +F+ ++ +G +P+ V Y T+I G CK+ + D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 324 RKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAG 383
K+ M KGL PN +YN +I+G CR ++E + EM +GY VTYNTLI G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 384 LCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
C G +A + EM + G+ VITY +LI CK G +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 162/336 (48%), Gaps = 12/336 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P +V + L ++ + + F + + F ++ G S N + + I CLC + A
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G SI T NS L G +R L ++E GY L+
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
K SE L+ +++ G P+ + +I+ C++ LL+ M D
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y VI+ LCK R +A +F ++ +G PD Y+++I LC G DA ++ +M+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
+ + PN T+NS+I + + L EA++L EM+ + VTYN+LI G C+H R D
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
EA +F M K DV+TYNTLI G+CK K+V+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 177/337 (52%), Gaps = 16/337 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELY---IQCLCESGLIEEA 157
G PDLV+ + + L + +A++ L+ + +Y I LC+ +++A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCI-KIDRTDLVWKLYHDLIES---------GYLIQ 207
F+++ G+ + T+ S+L+ C+ R +L D++E LI
Sbjct: 260 LNLFTEMDNKGIRPDVFTY-SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
AF +GK+ E +L ++++ + P +N LI+ FC ++ MV+++ P
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D TY +ING CK++K ++ +F D+ RG V +TV YTT+IHG + +A+ ++
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTV-TYNTLIAGLCL 386
+M+ G+ PN TYN+++ G C+ LE+A + E L K E + TYN + G+C
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 387 HGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
G+ ++ + LF ++ KG+ DVI YNT+I G+CK+G
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD V+ L L + A+ ++ G P+ + I LC+ G + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
+K+++ + + +++ + K D L+ ++ G LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN G+ S+ LL +LE + P FN LI F ++ +L M+ R+ P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +ING C + EA ++F + + +PD V Y T+I+G CK + D +++
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
+M +GL+ N TY ++IHG+ + + + A+ + K+M+ G +TYNTL+ GLC +G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ ++A +FE + + + D+ TYN + +G CK GK+
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 15/338 (4%)
Query: 101 GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G PD+ + + L L + A ++ D L+ +PN + I + G + E
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGKLIE 328
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQ 207
A F ++ + + +I T+NS + G DR D +++ D++ LI
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
FC KV +G EL R + GLV + LI F + + + MV+ P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
+ TY +++GLCK+ K +A VF L++ PD Y + G+CK G + D ++
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+ KG+ P+ YN+MI G+C+ EEA L +M + G + TYNTLI
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
G + L +EM D TY L+ +G++
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRL 605
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
K+ E +L ++++ P F+KL+S + K F V M + + +TY
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
+IN LC+ + A + + + GY P V ++++G C + +A + +M+
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G P+ T+ +++HG + + EA L + M+ KG VTY +I GLC G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCK 421
+L +M + I DV+ Y+T+I CK
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 47/106 (44%)
Query: 320 LGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNT 379
L +A ++ EM+ P+ ++ ++ ++ + ++M G TYN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+I LC + A + +M + G ++T N+L+ G+C +I
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 170/336 (50%), Gaps = 13/336 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P + + VL SL + A++ ++ TG PN ++ + I LC E+A
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKI----DRTDLV-----WKLYHDLIESGYLIQAFCN 211
++ E G+ ++ T+N+ + G K D D+V KL + LI+ +C
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
V + +L ++LE ++P+ +N LI C NF LL M R PD +T
Sbjct: 441 -SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +I+ LCKS++ EA +F+ L+++G P+ VMYT +I G CK G + +A M +M+
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
K LPN T+N++IHG C L+EA L ++M+ G T T LI L G D
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
AY F++M G D TY T IQ YC+EG++++
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 183 CIKIDRTDLVWKLYHDLIESGY--LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKL 240
C K+++ D ++L + LI Y L+ + G V E ++ ++LED + P +NK+
Sbjct: 166 CRKMNK-DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 241 ISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGY 300
++ +C+ N ++ + +V PD FTY +I G C+ + A++VFN++ +G
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284
Query: 301 VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKR 360
+ V YT +IHGLC + +A ++ +M P TY +I C + EA
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 361 LHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
L KEM + G TY LI LC + ++A L +M +KG+ +VITYN LI GYC
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 421 KEGKI 425
K G I
Sbjct: 405 KRGMI 409
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 188/426 (44%), Gaps = 46/426 (10%)
Query: 17 RNFQNPNTQLRNLSIETKESQQLYTEIAKQVCKITRTKPRWEQT--LLSDIPSFNFNDPL 74
R F + + LRNL E +S + + + +KP W ++ L S + + + P
Sbjct: 40 RQFCSVSPLLRNLPEEESDSMSVPHRLLSIL-----SKPNWHKSPSLKSMVSAIS---PS 91
Query: 75 FFREFLKQQNNVLLSIRFFQWL-------HSHYGFSPDLVSCNVLFDSLVEARAFKVAMD 127
+ ++ F W+ HS Y ++ L +L ++ FK+ +
Sbjct: 92 HVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLT---LLINNGYVGVVFKIRLL 148
Query: 128 FL---DSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCI 184
+ DS G + LY+ LC +E F +LK + G +N+ L
Sbjct: 149 MIKSCDSVGDA-------LYVLDLCRKMNKDERF----ELKYKLIIG---CYNTLLNSLA 194
Query: 185 KIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENT 235
+ D + ++Y +++E ++ +C G V E + + +++E GL P+
Sbjct: 195 RFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFF 254
Query: 236 AFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDL 295
+ LI +C++K+ ++ + M + + Y +I+GLC +R+ EA +F +
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 296 KERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNL 355
K+ P YT +I LC +A + EM G+ PN +TY +I C
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 356 EEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTL 415
E+A+ L +ML+KG +TYN LI G C G ++A + E M + + + TYN L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 416 IQGYCK 421
I+GYCK
Sbjct: 435 IKGYCK 440
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 150/329 (45%), Gaps = 13/329 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMD---FLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G P++++ N L + + + A+D ++S SPN + I+ C+S + +A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKA 446
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
+K+ E V + T+NS + G + D ++L + + G +I +
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C +V E +L + + G+ P + LI +C+ +L M+++N P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+ T+ +I+GLC K EA + + + G P T +IH L K G A +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
+M+ G P+ +TY + I YCR L +A+ + +M + G TY++LI G G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQ 417
+T+ A+ + + M G T+ +LI+
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 135/343 (39%), Gaps = 47/343 (13%)
Query: 104 PDLVSCNVLFDSLVEARAFKVA---MDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
PD+V+ N L D + F A + ++ G P+ + I LC+S +EEA
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYE 220
F L++ GV ++ + + LI +C GKV E +
Sbjct: 520 FDSLEQKGVNPNVVMYTA--------------------------LIDGYCKAGKVDEAHL 553
Query: 221 LLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLC 280
+L ++L +P + FN LI C + L MV P T +I+ L
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 281 KSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEY 340
K AY F + G PD YTT I C+ G L DA M +M G+ P+ +
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 341 TYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLI---------------AGLC 385
TY+S+I GY + A + K M D G + T+ +LI LC
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 386 LHGRT---DEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
D L E+M + + + +Y LI G C+ G +
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 176/473 (37%), Gaps = 84/473 (17%)
Query: 31 IETKESQQL------YTEIAKQVCKITRTKPR------WEQTLLSDIPSFNFNDPLFFRE 78
+E ES++L Y E+ K CK K E+ +L D+ ++N +
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNS-----LID 470
Query: 79 FLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDS---TGFS 135
+ N + R ++ G PD + + DSL +++ + A D DS G +
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 136 PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL 195
PN I C++G ++EA K+ + T+N+ + G + L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 196 YHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCE 246
+++ G LI DG Y +Q+L G P+ + I +C
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 247 KKNFGRVSELLHTMVARNRAPDNFTYEEVING---------------------------- 278
+ +++ M +PD FTY +I G
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Query: 279 ----------------------LCKSRKRLE---AYRVFNDLKERGYVPDTVMYTTVIHG 313
LC +E + + E P+ Y +I G
Sbjct: 710 FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 769
Query: 314 LCKMGWLGDARKMWFEMI-HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGE 372
+C++G L A K++ M ++G+ P+E +N+++ C++ EA ++ +M+ G+
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Query: 373 TTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ LI GL G + +F+ + Q G + D + + +I G K+G +
Sbjct: 830 QLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 48/340 (14%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G P + + +L L++ F A S+G P+ ++ +IQ C G + +A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSE 217
+K++E GV + T++S LI+ + + G+ +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSS--------------------------LIKGYGDLGQTNF 690
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKK------------------NFGRVSELLHT 259
+++L+++ + G P F LI E K F V ELL
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 260 MVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDL-KERGYVPDTVMYTTVIHGLCKMG 318
MV + P+ +YE++I G+C+ A +VF+ + + G P +++ ++ CK+
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 319 WLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYN 378
+A K+ +MI G LP + +I G + E + + +L GY E + +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 379 TLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQG 418
+I G+ G + Y LF M + G TY+ LI+G
Sbjct: 871 IIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 15/339 (4%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYI 145
+I FF ++ F V CN + V VA+ ++ N S + I
Sbjct: 90 AIDFFDYMVRSRPFYT-AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 146 QCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL 205
+C C+ + + F KL ++G + T+N+ L G DR L+ ++E+G+L
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
E L Q++E GL P FN LI+ C + + L++ MV +
Sbjct: 209 -----------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
D TY ++NG+CK A + + ++E PD V+Y+ +I LCK G DA+
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 326 MWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLC 385
++ EM+ KG+ PN +TYN MI G+C +A+RL ++M+++ +T+N LI+
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 386 LHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
G+ EA L +EM + IF D +TYN++I G+CK +
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 173/386 (44%), Gaps = 64/386 (16%)
Query: 101 GFSPDLVSCNVLF------DSLVEARA---FKVAMDFLDST---------GFSPNPNSLE 142
GF PD+V+ N L D + EA A + V FL++ G +P +
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 143 LYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH----- 197
I LC G + EA +K+ G+ + T+ + + G K+ T L
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 198 ----DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRV 253
D++ +I C DG S+ L ++LE G+ P +N +I FC +FGR
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC---SFGRW 347
Query: 254 SE---LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTV 310
S+ LL M+ R PD T+ +I+ K K EA ++ +++ R PDTV Y ++
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 311 IHGLCKMGWLGDARKMW-------------------------------FEMIHKGLLPNE 339
I+G CK DA+ M+ E+ +GL+ N
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 340 YTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEE 399
TYN++IHG+C +DNL A+ L +EM+ G T+T N L+ G C + + +EA LFE
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 400 MAQKGIFRDVITYNTLIQGYCKEGKI 425
+ I D + YN +I G CK K+
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKV 553
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 16/337 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFL---DSTGFSPNPNSLELYIQCLCESGLIEEA 157
G D+V+ + + + + K A++ L + T P+ I LC+ G +A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQA 208
FS++ E G+ ++ T+N + G R +L D+IE LI A
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
+GK+ E +L ++L + P+ +N +I FC+ F + M + PD
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
T+ +I+ C++++ E ++ ++ RG V +T Y T+IHG C++ L A+ ++
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EMI G+ P+ T N +++G+C + LEEA L + + TV YN +I G+C
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ DEA+ LF + G+ DV TYN +I G+C + I
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 151/330 (45%), Gaps = 13/330 (3%)
Query: 94 QWLHSHY---GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQ 146
Q+L S G +P++ + N + D + A ++ D ++ +P+ + I
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALIS 374
Query: 147 CLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH-----DLIE 201
+ G + EA ++ +F T+NS + G K +R D ++ D++
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT 434
Query: 202 SGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMV 261
+I +C +V EG +LLR++ GLV T +N LI FCE N +L M+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 262 ARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLG 321
+ PD T ++ G C++ K EA +F ++ DTV Y +IHG+CK +
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 322 DARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLI 381
+A ++ + G+ P+ TYN MI G+C + +A L +M D G+ TYNTLI
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 382 AGLCLHGRTDEAYHLFEEMAQKGIFRDVIT 411
G G D++ L EM G D T
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 310 VIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKG 369
VI +M A ++ +M + + N Y++N +I +C L + ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 370 YGETTVTYNTLIAGLCLHGRTDEA---------------YHLFEEMAQKGIFRDVITYNT 414
+ VT+NTL+ GLCL R EA LF++M + G+ VIT+NT
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 415 LIQGYCKEGKIV 426
LI G C EG+++
Sbjct: 232 LINGLCLEGRVL 243
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 30/195 (15%)
Query: 92 FFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSP---NPNSLELYIQCL 148
FQ + SH G PD ++CN+L E + A++ + S + + + I +
Sbjct: 489 LFQEMISH-GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 149 CESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQA 208
C+ ++EA+ F L GV ++T+N +I
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYN--------------------------VMISG 581
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
FC +S+ L ++ ++G P+N+ +N LI + + EL+ M + + D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
Query: 269 NFTYEEVINGLCKSR 283
FT + V + + R
Sbjct: 642 AFTIKMVADLITDGR 656
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 12/330 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P L+ + LF + + + + +D ++ G + N +L + I C C + AF A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G T+++ + G R +L ++E G+ L+ C
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+GKVS+ L+ +++E G P + ++ C+ ELL M R D
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +I+GLCK A+ +FN+++ +G+ D ++YTT+I G C G D K+ +MI
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
+ + P+ ++++I + + L EA+ LHKEM+ +G TVTY +LI G C + D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
+A H+ + M KG ++ T+N LI GYCK
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 158/336 (47%), Gaps = 12/336 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD V+ + L + L A++ +D G P +L + LC +G + +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
++ E G + T+ L K +T L +L D ++ +I
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C DG + + L ++ G + + LI FC + ++LL M+ R PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+ +I+ K K EA + ++ +RG PDTV YT++I G CK L A M
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
M+ KG PN T+N +I+GYC+ + +++ L ++M +G TVTYNTLI G C G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
+ + A LF+EM + + D+++Y L+ G C G+
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 168/339 (49%), Gaps = 12/339 (3%)
Query: 99 HYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIE 155
G P L++ N L + L A+ +D TGF PN + ++ +C+SG
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 156 EAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LI 206
A K++E + ++ + G K D + L++++ G+ LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 207 QAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA 266
+ FC G+ +G +LLR +++ + P+ AF+ LI F ++ EL M+ R +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 267 PDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM 326
PD TY +I+G CK + +A + + + +G P+ + +I+G CK + D ++
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 327 WFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCL 386
+ +M +G++ + TYN++I G+C + LE AK L +EM+ + V+Y L+ GLC
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 387 HGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+G ++A +FE++ + + D+ YN +I G C K+
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Score = 155 bits (391), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 178/359 (49%), Gaps = 21/359 (5%)
Query: 81 KQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFL---DSTGFSPN 137
K + VLL R + GF P+ V+ + + ++ +AM+ L + +
Sbjct: 192 KVSDAVLLIDRMVET-----GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 138 PNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH 197
+ I LC+ G ++ AF F++++ G I + + + G R D KL
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 198 DLIES---------GYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKK 248
D+I+ LI F +GK+ E EL +++++ G+ P+ + LI FC++
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 249 NFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYT 308
+ + +L MV++ P+ T+ +ING CK+ + +F + RG V DTV Y
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 309 TVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHK-EMLD 367
T+I G C++G L A++++ EM+ + + P+ +Y ++ G C DN E K L E ++
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC--DNGEPEKALEIFEKIE 484
Query: 368 KGYGETTV-TYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
K E + YN +I G+C + D+A+ LF + KG+ DV TYN +I G CK+G +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 9/293 (3%)
Query: 134 FSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVW 193
+P+ + I C + G + EA ++ + G+ T+ S + G K ++ D
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 194 KLYHDLIESG---------YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRF 244
+ ++ G LI +C + +G EL R++ G+V + +N LI F
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 245 CEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDT 304
CE EL MV+R PD +Y+ +++GLC + + +A +F +++ D
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 305 VMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKE 364
+Y +IHG+C + DA ++ + KG+ P+ TYN MI G C+ +L EA L ++
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 365 MLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQ 417
M + G+ TYN LI G ++ L EE+ + G D T ++
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 6/232 (2%)
Query: 196 YHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE 255
Y + + SG + D K + +L +++ P F++L S K + V +
Sbjct: 40 YRERLRSGIV------DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD 93
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLC 315
L M + A + +T +IN C+ RK A+ + + GY PDTV ++T+I+GLC
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 316 KMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTV 375
G + +A ++ M+ G P T N++++G C + +A L M++ G+ V
Sbjct: 154 LEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV 213
Query: 376 TYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
TY ++ +C G+T A L +M ++ I D + Y+ +I G CK+G + N
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 168/340 (49%), Gaps = 15/340 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G S DL +CN+L + ++ +A FL GF P+ + I C +EEA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
+++ EMG+ + + + + K + L+ D++ L+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN G+ + LLR + + + P+ FN LI F ++ F EL + M+ + AP+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +ING C EA ++F ++ +G PD V YT++I+G CK + DA K+++
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM KGL N TY ++I G+ ++ A+ + M+ +G TYN L+ LC +G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 389 RTDEAYHLFEEMAQK---GIFRDVITYNTLIQGYCKEGKI 425
+ +A +FE+M ++ G+ ++ TYN L+ G C GK+
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 20/367 (5%)
Query: 76 FREFLKQQNNVLLSIRFFQWLH--SHYGFS---PDLVSCNVLFDSLVEARAFKVAM---D 127
+RE L+ N L S++F + L +H S P ++ L + + + + F V + D
Sbjct: 40 YREILR---NGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD 96
Query: 128 FLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKID 187
L G S + + L + C C+S A K+ ++G I T+ S + G +
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 188 RTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFN 238
R + + + ++E G +I + C +G V+ L Q+ G+ P+ +
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 239 KLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKER 298
L++ C + LL M R PD T+ +I+ K K L+A ++N++
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 299 GYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEA 358
P+ YT++I+G C G + +AR+M++ M KG P+ Y S+I+G+C+ +++A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 359 KRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQG 418
++ EM KG T+TY TLI G G+ + A +F M +G+ ++ TYN L+
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 419 YCKEGKI 425
C GK+
Sbjct: 397 LCYNGKV 403
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 163/345 (47%), Gaps = 19/345 (5%)
Query: 88 LSIRFFQWLHSHY---GFSPDLVSCNVLFDSLVEARAF----KVAMDFLDSTGFSPNPNS 140
+++RFFQ LH + G S +S + L D RAF ++ + L S F+ +
Sbjct: 1 MAMRFFQ-LHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFN---EA 56
Query: 141 LELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLI 200
L+L+ + L + F+KL + V +K ++ + C + + + HDL
Sbjct: 57 LDLFTHMVESRPL--PSIIDFTKL--LNVIAKMKKFDVVINLCDHLQ----IMGVSHDLY 108
Query: 201 ESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTM 260
L+ FC + L ++++ G P+ F LI+ FC +++ M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 261 VARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWL 320
V PD Y +I+ LCK+ A +F+ ++ G PD VMYT++++GLC G
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 321 GDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTL 380
DA + M + + P+ T+N++I + + +A+ L+ EM+ TY +L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 381 IAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
I G C+ G DEA +F M KG F DV+ Y +LI G+CK K+
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 165/373 (44%), Gaps = 50/373 (13%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
GF PD+V+ L + + AM ++ G P+ I LC++G + A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDR---TDLVW------KLYHDLIESGYLIQA 208
F +++ G+ + + S + G R D + K+ D+I LI A
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F +GK + EL +++ + P + LI+ FC + ++ + M + PD
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMG---------- 318
Y +ING CK +K +A ++F ++ ++G +T+ YTT+I G ++G
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 319 ----------------------WLGDARK--MWFEMIHK----GLLPNEYTYNSMIHGYC 350
+ G +K M FE + K G+ PN +TYN ++HG C
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 351 RIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVI 410
LE+A + ++M + +TY +I G+C G+ A +LF + KG+ +V+
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 411 TYNTLIQGYCKEG 423
TY T+I G +EG
Sbjct: 497 TYTTMISGLFREG 509
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 10/242 (4%)
Query: 196 YHDLIESGYLIQAFCNDGKV----------SEGYELLRQVLEDGLVPENTAFNKLISRFC 245
+ L++ + ++AFCN ++ +E +L ++E +P F KL++
Sbjct: 24 FSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIA 83
Query: 246 EKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTV 305
+ K F V L + + D +T ++N C+S + A + + G+ PD V
Sbjct: 84 KMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIV 143
Query: 306 MYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEM 365
+T++I+G C + +A M +M+ G+ P+ Y ++I C+ ++ A L +M
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 366 LDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ G V Y +L+ GLC GR +A L M ++ I DVIT+N LI + KEGK
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 426 VN 427
++
Sbjct: 264 LD 265
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 15/281 (5%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEAFCA 160
PD+++ N L D+ V+ F A + + +PN + I C G ++EA
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
F ++ G F + + S + G K + D K+++++ + G LIQ F
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR---APD 268
GK + E+ ++ G+ P +N L+ C + + M R AP+
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+TY +++GLC + K +A VF D+++R + YT +I G+CK G + +A ++
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKG 369
+ KG+ PN TY +MI G R EA L ++M + G
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 160/334 (47%), Gaps = 12/334 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEAFCA 160
P ++ L + + + V + + G P + + + C+C S A C
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G + T+ S L G +R + L+ ++ G+ LI+ C
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+ ++ EL Q+ +G P +N L++ CE +G + LL M+ R P+ T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
+ +I+ K K +EA ++N + + PD Y ++I+GLC G L +AR+M++ M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
G PNE Y ++IHG+C+ +E+ ++ EM KG T+TY LI G CL GR D
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
A +F +M+ + D+ TYN L+ G C GK+
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 29/328 (8%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
GF PDLV+ L + + A+ D GF PN + I+CLC++ + A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSE 217
F+++ G ++ T+N+ L+ C G+ +
Sbjct: 208 VELFNQMGTNGSRPNVVTYNA--------------------------LVTGLCEIGRWGD 241
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVIN 277
LLR +++ + P F LI F + EL + M+ + PD FTY +IN
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 278 GLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLP 337
GLC EA ++F ++ G P+ V+YTT+IHG CK + D K+++EM KG++
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 338 NEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLF 397
N TY +I GYC + + A+ + +M + TYN L+ GLC +G+ ++A +F
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 398 EEMAQKGIFRDVITYNTLIQGYCKEGKI 425
E M ++ + +++TY +IQG CK GK+
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKV 449
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 132/282 (46%), Gaps = 12/282 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G P++V+ N L L E + A L PN + I + G + EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQA 208
++ + +M V+ + T+ S + G D ++++ + +G LI
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
FC +V +G ++ ++ + G+V + LI +C E+ + M +R PD
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +++GLC + K +A +F +++R + V YT +I G+CK+G + DA ++
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGY 370
+ KG+ PN TY +MI G+CR + EA L K+M + G+
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
+ ++ +L +++ +P F +L+S + + V L M P T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
V++ +C S + A + + G+ PD V +T++++G C + DA ++ +++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G PN TY ++I C+ +L A L +M G VTYN L+ GLC GR +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
L +M ++ I +VIT+ LI + K GK++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 12/191 (6%)
Query: 95 WLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCES 151
+L G P+ V L +++ + M + G N + + IQ C
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 152 GLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCI---KIDRTDLVWKLYH------DLIES 202
G + A F+++ I+T+N L G K+++ ++++ +++
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 203 GYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVA 262
+IQ C GKV + ++L + G+ P + +IS FC + L M
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 263 RNRAPDNFTYE 273
P+ Y+
Sbjct: 497 DGFLPNESVYK 507
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDS---TGFSPNPNSLELYIQCLCESGLIEEA 157
G+ P++V+ + L + ++ A+ +D TG+ PN + I L EA
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL----IESGYLI-----QA 208
++ G + T+ + G K TDL + L + + +E G LI
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C + + L +++ G+ P ++ LIS C + S LL M+ R PD
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FT+ +I+ K K +EA ++++++ +R P V Y+++I+G C L +A++M+
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
M+ K P+ TYN++I G+C+ +EE + +EM +G TVTYN LI GL G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
D A +F+EM G+ +++TYNTL+ G CK GK+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 172/336 (51%), Gaps = 14/336 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G PDLV+ V+ + L + +A + L+ P I LC+ +++A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCI-KIDRTDLVWKLYHDLIES---------GYLIQ 207
F +++ G+ ++ T+ S+L+ C+ R +L D+IE LI
Sbjct: 276 LNLFKEMETKGIRPNVVTY-SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
AF +GK+ E +L ++++ + P ++ LI+ FC ++ MV+++ P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D TY +I G CK ++ E VF ++ +RG V +TV Y +I GL + G A++++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
EM+ G+ PN TYN+++ G C+ LE+A + + + T TYN +I G+C
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
G+ ++ + LF ++ KG+ DV+ YNT+I G+C++G
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G+ P+ V+ N L L AM +D + G P+ + + + LC+ G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
F +K+++ + + +N+ + G K D L+ ++ G LI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN G+ S+ LL ++E + P+ F+ LI F ++ +L MV R+ P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +ING C + EA ++F + + PD V Y T+I G CK + + +++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +GL+ N TYN +I G + + + A+ + KEM+ G +TYNTL+ GLC +G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ ++A +FE + + + + TYN +I+G CK GK+
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 13/296 (4%)
Query: 144 YIQCLCESGL----IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL 199
Y + L +GL +++A F ++ + F SI ++ L K+++ D+V L +
Sbjct: 48 YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 107
Query: 200 IESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNF 250
G LI FC ++ +L ++++ G P + L++ +C K
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 251 GRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTV 310
L+ M P+ T+ +I+GL K EA + + + +G PD V Y V
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 311 IHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGY 370
++GLCK G A + +M L P YN++I G C+ ++++A L KEM KG
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 371 GETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
VTY++LI+ LC +GR +A L +M ++ I DV T++ LI + KEGK+V
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 15/338 (4%)
Query: 101 GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G P++V+ + L L + A ++ D ++ +P+ + I + G + E
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVE 344
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQ 207
A + ++ + + SI T++S + G DR D +++ D++ LI+
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
FC +V EG E+ R++ + GLV +N LI + + E+ MV+ P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
+ TY +++GLCK+ K +A VF L+ P Y +I G+CK G + D ++
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+ KG+ P+ YN+MI G+CR + EEA L KEM + G + YNTLI
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
G + + L +EM G D T L+ +G++
Sbjct: 585 GDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 621
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 165/372 (44%), Gaps = 27/372 (7%)
Query: 77 REFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFS- 135
R ++ + + L+ +FF+W + GF + S ++ L AR + A L S
Sbjct: 113 RVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK 172
Query: 136 -----------------PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNS 178
P + L + G++EEA FSK+K VF ++ N
Sbjct: 173 ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 179 ALLGCIKIDRTDLVWKLYHDLIESG---------YLIQAFCNDGKVSEGYELLRQVLEDG 229
L K+ +TD V + + D+I +G +I C +G V L ++ G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 230 LVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAY 289
LVP+ +N +I F + M PD TY +IN CK K
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 290 RVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGY 349
+ ++K G P+ V Y+T++ CK G + A K + +M GL+PNEYTY S+I
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 350 CRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDV 409
C+I NL +A RL EML G VTY LI GLC R EA LF +M G+ ++
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 410 ITYNTLIQGYCK 421
+YN LI G+ K
Sbjct: 473 ASYNALIHGFVK 484
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 171/371 (46%), Gaps = 15/371 (4%)
Query: 65 IPSFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVE-ARAFK 123
+P F D LF L + +I+ F + F P SCN L + +
Sbjct: 189 VPGFGVFDALF--SVLIDLGMLEEAIQCFSKMKRFRVF-PKTRSCNGLLHRFAKLGKTDD 245
Query: 124 VAMDFLDSTGFSPNPN--SLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALL 181
V F D G P + + I C+C+ G +E A F ++K G+ T+NS +
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 182 GCIKIDRTDLVWKLYH---------DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVP 232
G K+ R D + D+I LI FC GK+ G E R++ +GL P
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 233 ENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVF 292
+++ L+ FC++ + + M P+ +TY +I+ CK +A+R+
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 293 NDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRI 352
N++ + G + V YT +I GLC + +A +++ +M G++PN +YN++IHG+ +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 353 DNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITY 412
N++ A L E+ +G + Y T I GLC + + A + EM + GI + + Y
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 413 NTLIQGYCKEG 423
TL+ Y K G
Sbjct: 546 TTLMDAYFKSG 556
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 154/336 (45%), Gaps = 13/336 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
PD+++ N L + + + ++F + G PN S + C+ G++++A
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
+ ++ +G+ + T+ S + KI ++L +++++ G LI C+
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
++ E EL ++ G++P ++N LI F + KN R ELL+ + R PD
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y I GLC K A V N++KE G ++++YTT++ K G + + EM
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEML-DKGYGETTVTYNTLIAGLCLHGRT 390
+ T+ +I G C+ + +A + D G + +I GLC +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 391 DEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
+ A LFE+M QKG+ D Y +L+ G K+G ++
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 15/344 (4%)
Query: 91 RFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQC 147
RFF+ + G P + + N++ D + + + A + G P+ + I
Sbjct: 248 RFFKDMIGA-GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 148 LCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCI-KIDRTDLVWKLYHDLIESGY-- 204
+ G +++ C F ++K+M + T+N AL+ C K + + + Y ++ +G
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYN-ALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 205 -------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELL 257
L+ AFC +G + + + + GLVP + LI C+ N L
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 258 HTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKM 317
+ M+ + TY +I+GLC + + EA +F + G +P+ Y +IHG K
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 318 GWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTY 377
+ A ++ E+ +G+ P+ Y + I G C ++ +E AK + EM + G ++ Y
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 378 NTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
TL+ G E HL +EM + I V+T+ LI G CK
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%)
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
L + G + E + ++ + P+ + N L+ RF + V M+
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 257
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
P FTY +I+ +CK A +F ++K RG VPDTV Y ++I G K+G L D
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
+ EM P+ TYN++I+ +C+ L ++EM G V+Y+TL+
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
C G +A + +M + G+ + TY +LI CK G +
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 167/365 (45%), Gaps = 21/365 (5%)
Query: 75 FFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVE----ARAFKVAMDFLD 130
F +E + QQ +I+F+ + G P+ + L D+ + + AF++ + L
Sbjct: 377 FCKEGMMQQ-----AIKFYVDMR-RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML- 429
Query: 131 STGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTD 190
G N + I LC++ ++EA F K+ GV ++ ++N+ + G +K D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 191 LVWKLYH---------DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLI 241
+L + DL+ G I C+ K+ ++ ++ E G+ + + L+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 242 SRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLK-ERGY 300
+ + N LL M + T+ +I+GLCK++ +A FN + + G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 301 VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKR 360
+ ++T +I GLCK + A ++ +M+ KGL+P+ Y S++ G + N+ EA
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 361 LHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
L +M + G + Y +L+ GL + +A EEM +GI D + ++++ +
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 421 KEGKI 425
+ G I
Sbjct: 730 ELGCI 734
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 13/279 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G P+L S N L V+A+ A++ L+ G P+ +I LC IE A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQA 208
+++KE G+ + + + + K L ++ E LI
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 209 FCNDGKVSEGYELLRQVLED-GLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
C + VS+ + ++ D GL F +I C+ + L MV + P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D Y +++G K LEA + + + E G D + YT+++ GL L AR
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 706
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEML 366
EMI +G+ P+E S++ + + ++EA L ++
Sbjct: 707 EEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLM 745
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%)
Query: 301 VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKR 360
VP ++ + L +G L +A + + +M + P + N ++H + ++ ++ KR
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 361 LHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
K+M+ G T TYN +I +C G + A LFEEM +G+ D +TYN++I G+
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 421 KEGKI 425
K G++
Sbjct: 309 KVGRL 313
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 173/376 (46%), Gaps = 50/376 (13%)
Query: 99 HYGFSPDLVSCNVLFDSLVE-----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGL 153
+YG + SCNV L + A A V +F + G N S + I +C+ G
Sbjct: 203 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE-VGVCWNVASYNIVIHFVCQLGR 261
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY--------- 204
I+EA ++ G + ++++ + G + D VWKL + G
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE--------- 255
+I C K++E E +++ G++P+ + LI FC++ + S+
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 256 --------------------------LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAY 289
L H M + PD+ T+ E+ING CK+ +A+
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 290 RVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGY 349
RV N + + G P+ V YTT+I GLCK G L A ++ EM GL PN +TYNS+++G
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 350 CRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDV 409
C+ N+EEA +L E G TVTY TL+ C G D+A + +EM KG+ +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 410 ITYNTLIQGYCKEGKI 425
+T+N L+ G+C G +
Sbjct: 562 VTFNVLMNGFCLHGML 577
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 144/298 (48%), Gaps = 9/298 (3%)
Query: 133 GFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLV 192
G P+ I C+ G I A F ++ + + T+ + + G +I
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 193 WKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISR 243
KL+H++ G LI +C G + + + + +++ G P + LI
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 244 FCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPD 303
C++ + +ELLH M P+ FTY ++NGLCKS EA ++ + + G D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 304 TVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHK 363
TV YTT++ CK G + A+++ EM+ KGL P T+N +++G+C LE+ ++L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 364 EMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
ML KG T+N+L+ C+ A ++++M +G+ D TY L++G+CK
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 12/338 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G PD V L D + + A F + S +P+ + I C+ G + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQA 208
F ++ G+ T+ + G K +++++ +I++G LI
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C +G + ELL ++ + GL P +N +++ C+ N +L+ A D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +++ CKS + +A + ++ +G P V + +++G C G L D K+
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
M+ KG+ PN T+NS++ YC +NL+ A ++K+M +G G TY L+ G C
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
EA+ LF+EM KG V TY+ LI+G+ K K +
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 192/464 (41%), Gaps = 69/464 (14%)
Query: 3 RAPFSVLTILRQNPRNFQNP----NTQLRNLSIET------------KESQQLYTEIAKQ 46
+ PF+ L + R +F+N + Q R LS T K++ TE Q
Sbjct: 2 KKPFTGLLMKRGTLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQ 61
Query: 47 VCKITRTKPRWEQTLLSDIP-SFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPD 105
+ + + + R E S P F +K + + L + FF W S +
Sbjct: 62 ITNVIKLR-RAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSN 118
Query: 106 LVSCNVLFDSLVEARAFKVAMDFLDSTGFSP------------------------NPNSL 141
L S ++ V ++ KVA + S P +P
Sbjct: 119 LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVF 178
Query: 142 ELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIE 201
+++ Q L + GL+ EA F K+ G+ S+ + N L +L D +
Sbjct: 179 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLT------------RLSKDCYK 226
Query: 202 SGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMV 261
+ I F R+ E G+ ++N +I C+ LL M
Sbjct: 227 TATAIIVF-------------REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 262 ARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLG 321
+ PD +Y V+NG C+ + + +++ +K +G P++ +Y ++I LC++ L
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 322 DARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLI 381
+A + + EMI +G+LP+ Y ++I G+C+ ++ A + EM + +TY +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 382 AGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+G C G EA LF EM KG+ D +T+ LI GYCK G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 171/390 (43%), Gaps = 17/390 (4%)
Query: 34 KESQQLYTEIAKQVCKITRTKPRWEQTLLSDIPSFNFNDPLFFREFLK---QQNNVLLSI 90
K + +Y I +C+I + E+ I D + + + ++ ++ +
Sbjct: 313 KPNSYIYGSIIGLLCRICKL-AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 91 RFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQC 147
+FF +HS +PD+++ + + A G P+ + I
Sbjct: 372 KFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 148 LCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY--- 204
C++G +++AF + + + G ++ T+ + + G K D +L H++ + G
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 205 ------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLH 258
++ C G + E +L+ + GL + + L+ +C+ + E+L
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 259 TMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMG 318
M+ + P T+ ++NG C + ++ N + +G P+ + +++ C
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 319 WLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYN 378
L A ++ +M +G+ P+ TY +++ G+C+ N++EA L +EM KG+ + TY+
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 379 TLIAGLCLHGRTDEAYHLFEEMAQKGIFRD 408
LI G + EA +F++M ++G+ D
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 96 LHSHY---GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLC 149
+H+H G SP++V+ L D L + A + L G PN + + LC
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 150 ESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG------ 203
+SG IEEA + + G+ T+ + + K D ++ +++ G
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 204 ---YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTM 260
L+ FC G + +G +LL +L G+ P T FN L+ ++C + N + + M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 261 VARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWL 320
+R PD TYE ++ G CK+R EA+ +F ++K +G+ Y+ +I G K
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 321 GDARKMWFEMIHKGLLPNEYTYN 343
+AR+++ +M +GL ++ ++
Sbjct: 683 LEAREVFDQMRREGLAADKEIFD 705
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 13/345 (3%)
Query: 93 FQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLC 149
F L S GF+ + +CN L SLV ++A + +G N +L + + LC
Sbjct: 188 FTLLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALC 246
Query: 150 ESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY----- 204
+ G +E+ S+++E GV+ I T+N+ + + ++L + + G+
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 205 ----LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTM 260
+I C GK E+ ++L GL P++T + L+ C+K + ++ M
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 261 VARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWL 320
+R+ PD + +++ +S +A FN +KE G +PD V+YT +I G C+ G +
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 321 GDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTL 380
A + EM+ +G + TYN+++HG C+ L EA +L EM ++ + T L
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 381 IAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
I G C G A LF++M +K I DV+TYNTL+ G+ K G I
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 185/423 (43%), Gaps = 68/423 (16%)
Query: 72 DPLFFREFL-KQQNNVLLSIRFFQWLHSHY-GFSPDLVSCNVLFDSLVEARAFKVA---- 125
+PL E L + +N++ L RF L H+ F +S + + LV + A
Sbjct: 77 NPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCL 136
Query: 126 --------------MDFLDSTGFS---PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMG 168
++ LDST FS N + +L I+ ++ + EA AF+ L+ G
Sbjct: 137 LRMIRRSGVSRLEIVNSLDST-FSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 195
Query: 169 VFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGY 219
SI N+ + ++I +L W +Y ++ SG ++ A C DGK+ +
Sbjct: 196 FTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVG 255
Query: 220 ELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGL 279
L QV E G+ P+ +N LIS + K EL++ M + +P +TY VINGL
Sbjct: 256 TFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 280 CKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK------ 333
CK K A VF ++ G PD+ Y +++ CK G + + K++ +M +
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 334 -----------------------------GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKE 364
GL+P+ Y +I GYCR + A L E
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNE 435
Query: 365 MLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
ML +G VTYNT++ GLC EA LF EM ++ +F D T LI G+CK G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 425 IVN 427
+ N
Sbjct: 496 LQN 498
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 170/335 (50%), Gaps = 12/335 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G PD+V+ N L + + A + +++ GFSP + I LC+ G E A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 158 FCAFSKLKEMGVFGSIKTWNSALL-GCIKID--RTDLVWK------LYHDLIESGYLIQA 208
F+++ G+ T+ S L+ C K D T+ V+ + DL+ ++
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F G + + V E GL+P+N + LI +C K L + M+ + A D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +++GLCK + EA ++FN++ ER PD+ T +I G CK+G L +A +++
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
+M K + + TYN+++ G+ ++ +++ AK + +M+ K T ++Y+ L+ LC G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
EA+ +++EM K I V+ N++I+GYC+ G
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 599
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 161/335 (48%), Gaps = 14/335 (4%)
Query: 101 GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
GFSP + + N + + L + RA +V + L S G SP+ + + C+ G + E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVVE 358
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQ 207
FS ++ V + ++S + + D ++ + E+G LIQ
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
+C G +S L ++L+ G + +N ++ C++K G +L + M R P
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D++T +I+G CK A +F +KE+ D V Y T++ G K+G + A+++W
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+M+ K +LP +Y+ +++ C +L EA R+ EM+ K T + N++I G C
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKE 422
G + E+M +G D I+YNTLI G+ +E
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 180/403 (44%), Gaps = 25/403 (6%)
Query: 40 YTEIAKQVCK---ITRTKPRWEQTLLSDIPSFNFNDPLFFREFLKQ---QNNVLLSIRFF 93
Y + +CK R K + + L S + D +R L + + +V+ + + F
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSP----DSTTYRSLLMEACKKGDVVETEKVF 363
Query: 94 QWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDS---TGFSPNPNSLELYIQCLCE 150
+ S PDLV + + + A+ + +S G P+ + IQ C
Sbjct: 364 SDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 151 SGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY------ 204
G+I A +++ + G + T+N+ L G K KL++++ E
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 205 ---LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMV 261
LI C G + EL +++ E + + +N L+ F + + E+ MV
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 262 ARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLG 321
++ P +Y ++N LC EA+RV++++ + P ++ ++I G C+ G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 322 DARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDK--GYGETTVTYNT 379
D +MI +G +P+ +YN++I+G+ R +N+ +A L K+M ++ G TYN+
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKE 422
++ G C + EA + +M ++G+ D TY +I G+ +
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 133/284 (46%), Gaps = 14/284 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G + D+V+ N + L + + A + P+ +L + I C+ G ++ A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQA 208
F K+KE + + T+N+ L G K+ D +++ D++ L+ A
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C+ G ++E + + +++ + P N +I +C N L M++ PD
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKER--GYVPDTVMYTTVIHGLCKMGWLGDARKM 326
+Y +I G + +A+ + ++E G VPD Y +++HG C+ + +A +
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 327 WFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGY 370
+MI +G+ P+ TY MI+G+ DNL EA R+H EML +G+
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 31/240 (12%)
Query: 105 DLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCAF 161
D+V+ N L D + A + + S P P S + + LC G + EAF +
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 162 SKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYEL 221
++ + ++ NS +I+ +C G S+G
Sbjct: 574 DEMISKNIKPTVMICNS--------------------------MIKGYCRSGNASDGESF 607
Query: 222 LRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA--PDNFTYEEVINGL 279
L +++ +G VP+ ++N LI F ++N + L+ M PD FTY +++G
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 280 CKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNE 339
C+ + EA V + ERG PD YT +I+G L +A ++ EM+ +G P++
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 9/281 (3%)
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL---------YHDLIESGY 204
+ +A FS + + F SI +N L +K+ + D+V L +DL
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
+I FC +VS +L ++L+ G P+ L++ FC + L+ MV
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
PD Y +I+ LCK+++ +A+ F +++ +G P+ V YT +++GLC DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
++ +MI K + PN TY++++ + + + EAK L +EM+ VTY++LI GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
CLH R DEA +F+ M KG DV++YNTLI G+CK ++
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 170/335 (50%), Gaps = 12/335 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDS---TGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD V+ L + A+ +D G+ P+ + I LC++ + +A
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQA 208
F F +++ G+ ++ T+ + + G R +L D+I+ L+ A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F +GKV E EL +++ + P+ ++ LI+ C +++ MV++ D
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+Y +ING CK+++ + ++F ++ +RG V +TV Y T+I G + G + A++ +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
+M G+ P+ +TYN ++ G C LE+A + ++M + VTY T+I G+C G
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
+ +EA+ LF ++ KG+ D++TY T++ G C +G
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 162/334 (48%), Gaps = 12/334 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P +V N L ++V+ + + V + ++ G + + + I C C + A
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G T S + G + +R L ++E GY +I + C
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+V++ ++ +++ G+ P + L++ C + + LL M+ + P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +++ K+ K LEA +F ++ PD V Y+++I+GLC + +A +M+ M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
KG L + +YN++I+G+C+ +E+ +L +EM +G TVTYNTLI G G D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+A F +M GI D+ TYN L+ G C G++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 163/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G DL + N++ + +A+ L G+ P+ ++ + C + +A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
K+ E+G I +N+ + K R + + + ++ G L+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN + S+ LL +++ + P ++ L+ F + EL MV + PD
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +INGLC + EA ++F+ + +G + D V Y T+I+G CK + D K++
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +GL+ N TYN++I G+ + ++++A+ +M G TYN L+ GLC +G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
++A +FE+M ++ + D++TY T+I+G CK GK+
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 47/325 (14%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCES------ 151
G+ PD+V+ N + DSL + + A DF ++ G PN + + LC S
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 152 -----------------------------GLIEEAFCAFSKLKEMGVFGSIKTWNSALLG 182
G + EA F ++ M + I T++S + G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 183 CIKIDRTDLVWKLYH---------DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPE 233
DR D +++ D++ LI FC +V +G +L R++ + GLV
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 234 NTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFN 293
+N LI F + + + E M +PD +TY ++ GLC + + +A +F
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 294 DLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRID 353
D+++R D V YTTVI G+CK G + +A ++ + KGL P+ TY +M+ G C
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 354 NLEEAKRLHKEMLDKGYGETTVTYN 378
L E + L+ +M +G + T +
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%)
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
D K+++ +L +++ P FN+L+S + K + V L M D +T
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
+ VIN C + A + + + GY PD V ++++G C+ + DA + +M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
G P+ YN++I C+ + +A KE+ KG VTY L+ GLC R
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
+A L +M +K I +VITY+ L+ + K GK++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 58 EQTLLSDIPSFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLV 117
++ L+S+ ++N FF Q +V + FF + +G SPD+ + N+L L
Sbjct: 358 QRGLVSNTVTYNTLIQGFF-----QAGDVDKAQEFFSQMD-FFGISPDIWTYNILLGGLC 411
Query: 118 EARAFKVAMDFLDSTGFSPNPNSLELY---IQCLCESGLIEEAFCAFSKLKEMGVFGSIK 174
+ + A+ + + Y I+ +C++G +EEA+ F L G+ I
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 175 TWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFC--NDGKVSEGYELLRQVLEDGLVP 232
T+ + + G V LY + + G L++ C +DG ++ EL++++L G P
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEG-LMKNDCTLSDGDITLSAELIKKMLSCGYAP 530
Query: 233 ENTAFNKLISRFCEK 247
+ + S C+K
Sbjct: 531 --SLLKDIKSGVCKK 543
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 29/328 (8%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
GF P +V+ L + + F+ A+ +DS GF PN I LC++ + A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSE 217
F +++ G+ T+N+ LI N G+ ++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNT--------------------------LISGLSNSGRWTD 237
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVIN 277
LLR +++ + P F LI F ++ N L M+ R+ P+ FTY +IN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 278 GLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLP 337
G C +A +F+ + +G PD V Y T+I G CK + D K++ EM ++GL+
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 338 NEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLF 397
+ +TYN++IHGYC+ L A+++ M+D G VTYN L+ LC +G+ ++A +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 398 EEMAQKGIFRDVITYNTLIQGYCKEGKI 425
E++ + + D+ITYN +IQG C+ K+
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 144/280 (51%), Gaps = 9/280 (3%)
Query: 155 EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYL 205
++AF F ++ + SI + L K+++ D+V LYH DL L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
I FC ++S LL ++++ G P L++ FC+ F L+ +M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
P+ Y VINGLCK+R A VF ++++G D V Y T+I GL G DA +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 326 MWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLC 385
+ +M+ + + PN + ++I + + NL EA+ L+KEM+ + TYN+LI G C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 386 LHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+HG +A ++F+ M KG F DV+TYNTLI G+CK ++
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 136 PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL 195
PN + I C G + +A F + G F + T+N+ + G K R + KL
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 196 YHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCE 246
+ ++ G LI +C GK++ ++ ++++ G+ P+ +N L+ C
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 247 KKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVM 306
+ ++ + D TY +I GLC++ K EA+ +F L +G PD +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 307 YTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHK 363
Y T+I GLC+ G +A K+ M G +P+E Y+ + + + E K H+
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAAHE 523
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
K + + L ++L+ +P F ++++ + F V L H M + D +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
+I+ C+ + A + + + G+ P V ++++G C+ +A + M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G +PN YN++I+G C+ +L A + M KG VTYNTLI+GL GR +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
L +M ++ I +VI + LI + KEG ++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 287 EAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMI 346
+A+ +F ++ + +P V +T V+ + KM ++ +M + G+ + Y++ +I
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 347 HGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIF 406
H +CR L A L +M+ G+ + VT +L+ G C R EA L + M G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 407 RDVITYNTLIQGYCKEGKIVN 427
+V+ YNT+I G CK + N
Sbjct: 182 PNVVIYNTVINGLCKNRDLNN 202
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 179/383 (46%), Gaps = 47/383 (12%)
Query: 82 QQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDST--GFSPNPN 139
+++ L++ F L ++ G P +CN+L SLV A F+ + D G SP+
Sbjct: 216 KRDGCYLALDVFPVL-ANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVY 274
Query: 140 SLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL 199
I C+ G +EEA FSK++E GV ++ T+N+ + G R D + +
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 200 IESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNF 250
+E G L++ ++ + Y +L+++ + G P +N LI F E +
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394
Query: 251 GRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGY---------- 300
+ E+ MV++ + + TY +I G CK+ + A R+ ++ G+
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 454
Query: 301 -------------------------VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGL 335
P + TT+I GLCK G A ++WF+ ++KG
Sbjct: 455 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 514
Query: 336 LPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYH 395
+ + T N+++HG C L+EA R+ KE+L +G V+YNTLI+G C + DEA+
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574
Query: 396 LFEEMAQKGIFRDVITYNTLIQG 418
+EM ++G+ D TY+ LI G
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICG 597
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 165/375 (44%), Gaps = 51/375 (13%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD------------------------------ 130
GF P+++ N L DS +EA + A++ D
Sbjct: 373 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 432
Query: 131 --------STGFSPNPNSLELYIQCLCESGLIEEA--FCAFSKLKEMGVFGSIKTWNSAL 180
S GF+ N S I LC + + A F L+ M G + T + +
Sbjct: 433 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT--TLI 490
Query: 181 LGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLV 231
G K + +L+ + G+ L+ C GK+ E + + +++L G V
Sbjct: 491 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 550
Query: 232 PENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRV 291
+ ++N LIS C KK L MV R PDN+TY +I GL K EA +
Sbjct: 551 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 610
Query: 292 FNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCR 351
++D K G +PD Y+ +I G CK + ++ + EM+ K + PN YN +I YCR
Sbjct: 611 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 670
Query: 352 IDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVIT 411
L A L ++M KG + TY +LI G+ + R +EA LFEEM +G+ +V
Sbjct: 671 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 730
Query: 412 YNTLIQGYCKEGKIV 426
Y LI GY K G++V
Sbjct: 731 YTALIDGYGKLGQMV 745
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 152/317 (47%), Gaps = 10/317 (3%)
Query: 119 ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNS 178
++A ++ FL+ GF + + + LCE+G ++EAF ++ G ++N+
Sbjct: 500 SKALELWFQFLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 558
Query: 179 ALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDG 229
+ GC + D + ++++ G LI N KV E + +G
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 618
Query: 230 LVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAY 289
++P+ ++ +I C+ + E M+++N P+ Y +I C+S + A
Sbjct: 619 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 678
Query: 290 RVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGY 349
+ D+K +G P++ YT++I G+ + + +A+ ++ EM +GL PN + Y ++I GY
Sbjct: 679 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 738
Query: 350 CRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDV 409
++ + + + L +EM K +TY +I G G EA L EM +KGI D
Sbjct: 739 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Query: 410 ITYNTLIQGYCKEGKIV 426
ITY I GY K+G ++
Sbjct: 799 ITYKEFIYGYLKQGGVL 815
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 13/345 (3%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYI 145
+++ F + G +P++V+ N + D L + A F + G P + + +
Sbjct: 292 AVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 350
Query: 146 QCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIK-------IDRTDLVWKLYHD 198
+ L + I +A+ ++ + G ++ +N+ + I+ I+ DL+
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410
Query: 199 LIESGY--LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSEL 256
L S Y LI+ +C +G+ LL+++L G +F +I C F
Sbjct: 411 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 470
Query: 257 LHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCK 316
+ M+ RN +P +I+GLCK K +A ++ +G+V DT ++HGLC+
Sbjct: 471 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 530
Query: 317 MGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVT 376
G L +A ++ E++ +G + + +YN++I G C L+EA EM+ +G T
Sbjct: 531 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 377 YNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
Y+ LI GL + +EA +++ + G+ DV TY+ +I G CK
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 635
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 19/339 (5%)
Query: 92 FFQWLHSHYGFSPDLVSCNVLFDSLVEA----RAFKVAMDFLDSTGFSPNPNSLELYIQC 147
+FQ+L+ GF D + N L L EA AF++ + L G + S I
Sbjct: 506 WFQFLNK--GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL-GRGCVMDRVSYNTLISG 562
Query: 148 LCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL-- 205
C ++EAF ++ + G+ T++ + G +++ + + + D +G L
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 206 -------IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLH 258
I C + EG E +++ + P +N LI +C EL
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 259 TMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMG 318
M + +P++ TY +I G+ + EA +F +++ G P+ YT +I G K+G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 319 WLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYN 378
+ + EM K + PN+ TY MI GY R N+ EA RL EM +KG ++TY
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 802
Query: 379 TLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQ 417
I G G EA+ +E I +N LIQ
Sbjct: 803 EFIYGYLKQGGVLEAFKGSDEENYAAIIEG---WNKLIQ 838
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 202 SGYLIQAFCNDGKVSEGY---ELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLH 258
S LI+ +C K Y ++ + G+ P T N L++ F + E
Sbjct: 204 SDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 263
Query: 259 TMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMG 318
+V + +PD + + IN CK K EA ++F+ ++E G P+ V + TVI GL G
Sbjct: 264 -VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 322
Query: 319 WLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYN 378
+A +M+ +G+ P TY+ ++ G R + +A + KEM KG+ + YN
Sbjct: 323 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 382
Query: 379 TLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
LI G ++A + + M KG+ TYNTLI+GYCK G+ N
Sbjct: 383 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 431
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 161/330 (48%), Gaps = 12/330 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P +V N L ++ + F++ + + + G S + + ++I C C + A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
+K+ ++G I T +S L G R L ++E GY LI
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
K SE L+ Q+++ G P+ + +++ C++ + LL+ M A +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
+ +I+ LCK R A +F +++ +G P+ V Y ++I+ LC G DA ++ M+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
K + PN T+N++I + + L EA++LH+EM+ + T+TYN LI G C+H R D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
EA +F+ M K ++ TYNTLI G+CK
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 161/337 (47%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD + L L A+ +D G P+ + + LC+ G I+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
+K++ + ++ +N+ + K ++ L+ ++ G LI
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN G+ S+ LL +LE + P FN LI F ++ +L M+ R+ PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +ING C + EA ++F + + +P+ Y T+I+G CK + D +++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +GL+ N TY ++I G+ + + + A+ + K+M+ +TY+ L+ GLC +G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ D A +F+ + + + ++ YNT+I+G CK GK+
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 32/322 (9%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
++V N + DSL + R +VA+D +++ G PN + I CLC G +A
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYE 220
S + E + ++ T+N+ LI AF +GK+ E +
Sbjct: 316 LSNMLEKKINPNVVTFNA--------------------------LIDAFFKEGKLVEAEK 349
Query: 221 LLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLC 280
L ++++ + P+ +N LI+ FC ++ MV+++ P+ TY +ING C
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 281 KSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEY 340
K ++ + +F ++ +RG V +TV YTT+I G + G A+ ++ +M+ + +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 341 TYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEM 400
TY+ ++HG C L+ A + K + YNT+I G+C G+ EA+ LF +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 401 AQKGIFRDVITYNTLIQGYCKE 422
+ K DV+TYNT+I G C +
Sbjct: 530 SIKP---DVVTYNTMISGLCSK 548
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 9/282 (3%)
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL---------YHDLIESGY 204
+++A F + + F SI +N L K+++ +LV L HDL
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
I FC ++S +L ++++ G P+ + L++ +C K L+ MV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
PD FT+ +I+GL K EA + + + +RG PD V Y TV++GLCK G + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
+ +M + N +N++I C+ ++E A L EM KG VTYN+LI L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
C +GR +A L M +K I +V+T+N LI + KEGK+V
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
KV + +L +++ P FNKL+S + F V L M + D +TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
IN C+ + A V + + GY PD V +++++G C + DA + +M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G P+ +T+ ++IHG + EA L +M+ +G VTY T++ GLC G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCK 421
+L +M I +V+ +NT+I CK
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCK 270
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 181/365 (49%), Gaps = 29/365 (7%)
Query: 92 FFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNS--------LEL 143
FF+++ S GF + + VL L F A ++ NS +E+
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 144 YIQCLC------------ESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDL 191
+ +C + G I +A F ++ I+ + L +K++ T
Sbjct: 164 RVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGT 223
Query: 192 VWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLIS 242
+W Y +++++G+ L+ FC +G +S+ ++ ++ + L P +FN LI+
Sbjct: 224 IWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283
Query: 243 RFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVP 302
+C+ N L H M PD FTY +IN LCK K A+ +F+++ +RG +P
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 303 DTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLH 362
+ V++TT+IHG + G + ++ + +M+ KGL P+ YN++++G+C+ +L A+ +
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 363 KEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKE 422
M+ +G +TY TLI G C G + A + +EM Q GI D + ++ L+ G CKE
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 423 GKIVN 427
G++++
Sbjct: 464 GRVID 468
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 166/379 (43%), Gaps = 50/379 (13%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELY 144
+I+ F+ H F + C L D +++ + M+ LD+ GF N +
Sbjct: 189 AIQCFRLSRKHR-FDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDA-GFPLNVYVFNIL 246
Query: 145 IQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH------- 197
+ C+ G I +A F ++ + + ++ ++N+ + G K+ D ++L H
Sbjct: 247 MNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 198 --DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE 255
D+ LI A C + K+ + L ++ + GL+P + F LI + E
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHG-- 313
M+++ PD Y ++NG CK+ + A + + + RG PD + YTT+I G
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 314 ---------------------------------LCKMGWLGDARKMWFEMIHKGLLPNEY 340
+CK G + DA + EM+ G+ P++
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 341 TYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEM 400
TY M+ +C+ + + +L KEM G+ + VTYN L+ GLC G+ A L + M
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 401 AQKGIFRDVITYNTLIQGY 419
G+ D ITYNTL++G+
Sbjct: 547 LNIGVVPDDITYNTLLEGH 565
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 12/290 (4%)
Query: 136 PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL 195
P+ + I LC+ ++ A F ++ + G+ + + + + G + DL+ +
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 196 YHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCE 246
Y ++ G L+ FC +G + ++ ++ GL P+ + LI FC
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 247 KKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVM 306
+ E+ M D + ++ G+CK + ++A R ++ G PD V
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 307 YTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEML 366
YT ++ CK G K+ EM G +P+ TYN +++G C++ ++ A L ML
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 367 DKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
+ G +TYNTL+ G H + + Y E+ GI D+ +Y +++
Sbjct: 548 NIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIV 594
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 171/337 (50%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFL---DSTGFSPNPNSLELYIQCLCESGLIEEA 157
G PD+V+ N + + + + +A+D L + + + I LC G I+ A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDR--------TDLVWK-LYHDLIESGYLIQA 208
F +++ G+ S+ T+NS + G K + D+V + + ++I L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F +GK+ E EL ++++ G+ P +N L+ +C + + +L MV +PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
T+ +I G C ++ + +VF ++ +RG V + V Y+ ++ G C+ G + A +++
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM+ G+LP+ TY ++ G C LE+A + +++ V Y T+I G+C G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ ++A++LF + KG+ +V+TY +I G CK+G +
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 29/320 (9%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P LV + F ++ + F + +DF L+ G + N +L + I C C A+
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYE 220
K+ ++G T+N+ LI+ +GKVSE
Sbjct: 146 LGKVMKLGYEPDTTTFNT--------------------------LIKGLFLEGKVSEAVV 179
Query: 221 LLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLC 280
L+ +++E+G P+ +N +++ C + +LL M RN D FTY +I+ LC
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 281 KSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEY 340
+ A +F +++ +G V Y +++ GLCK G D + +M+ + ++PN
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 341 TYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEM 400
T+N ++ + + L+EA L+KEM+ +G +TYNTL+ G C+ R EA ++ + M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 401 AQKGIFRDVITYNTLIQGYC 420
+ D++T+ +LI+GYC
Sbjct: 360 VRNKCSPDIVTFTSLIKGYC 379
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
Query: 195 LYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLI-SRFCEKKNFGRV 253
+ H++ +I FC K Y +L +V++ G P+ T FN LI F E G+V
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE----GKV 174
Query: 254 SE---LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTV 310
SE L+ MV PD TY ++NG+C+S A + ++ER D Y+T+
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 311 IHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGY 370
I LC+ G + A ++ EM KG+ + TYNS++ G C+ + L K+M+ +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 371 GETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+T+N L+ G+ EA L++EM +GI ++ITYNTL+ GYC + ++
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 13/341 (3%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYI 145
+I F+ + + G +V+ N L L +A + L S PN + + +
Sbjct: 247 AISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 146 QCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRT-------DLVW--KLY 196
+ G ++EA + ++ G+ +I T+N+ + G +R DL+ K
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 197 HDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSEL 256
D++ LI+ +C +V +G ++ R + + GLV ++ L+ FC+ EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 257 LHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCK 316
MV+ PD TY +++GLC + K +A +F DL++ VMYTT+I G+CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 317 MGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVT 376
G + DA ++ + KG+ PN TY MI G C+ +L EA L ++M + G T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 377 YNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQ 417
YNTLI G + L EEM G D + +I
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%)
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
D K + L ++++ +P F++ S K F V + + A + +T
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
+IN C+ K AY V + + GY PDT + T+I GL G + +A + M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
G P+ TYNS+++G CR + A L ++M ++ TY+T+I LC G D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
A LF+EM KGI V+TYN+L++G CK GK
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 82 QQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSL 141
Q + L+ FQ + SH G PD+++ +L D L + + A++ + S +
Sbjct: 415 QSGKIKLAEELFQEMVSH-GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 142 ELY---IQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHD 198
+Y I+ +C+ G +E+A+ F L GV ++ T+
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT--------------------- 512
Query: 199 LIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLH 258
+I C G +SE LLR++ EDG P + +N LI + ++L+
Sbjct: 513 -----VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 259 TMVARNRAPDNFTYEEVINGL 279
M + + D + + VI+ L
Sbjct: 568 EMKSCGFSADASSIKMVIDML 588
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 322 DARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLI 381
DA ++ EMI LP+ ++ R K++ G T N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 382 AGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
C +T AY + ++ + G D T+NTLI+G EGK+
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 190/409 (46%), Gaps = 29/409 (7%)
Query: 30 SIETKESQQLYTEIAKQVCKITRTKPRWEQTLLSDIPSF-NFNDPLFFREFLKQQNNVLL 88
+ TK S E CK+ +++P +PS +F+ L + + N L
Sbjct: 40 TFSTKRSSMNLEEEIDLFCKMIQSRP---------LPSIVDFSKVL---SKIAKSKNYDL 87
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYI 145
I F + G DL S N++ + L F +A+ + G+ P+ ++ I
Sbjct: 88 VISLFHHMEV-CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 146 QCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH-------- 197
C+ + +A SK++EMG + +N+ + G KI + +L+
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 198 -DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSEL 256
D + L+ C G+ S+ L+R ++ +VP F +I F ++ F +L
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 257 LHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCK 316
M R PD FTY +INGLC + EA ++ + + +G +PD V Y T+I+G CK
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 317 MGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVT 376
+ + K++ EM +GL+ + TYN++I GY + + A+ + M + T
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRT 383
Query: 377 YNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
Y+ L+ GLC++ R ++A LFE M + I D+ TYN +I G CK G +
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 46/352 (13%)
Query: 100 YGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEE 156
+G+ PD+V+ + L + + A+D ++ GF P+ I C+ GL+ +
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL---------IQ 207
A F +++ GV T+NS + G R +L D++ + I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
F +GK SE +L ++ + P+ +N LI+ C ++L MV + P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVI---------------- 311
D TY +ING CKS++ E ++F ++ +RG V DT+ Y T+I
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 312 ----------------HGLCKMGWLGDARKMWFEMIHKGLLPNEYT-YNSMIHGYCRIDN 354
+GLC M W + + FE + K + + T YN +IHG C+I N
Sbjct: 373 SRMDSRPNIRTYSILLYGLC-MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 355 LEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIF 406
+E+A L + + KG V+Y T+I+G C + D++ L+ +M + G+
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 177/341 (51%), Gaps = 16/341 (4%)
Query: 99 HYGFSPDLVSCNVLFDSLVEARAFKVAMDFL---DSTGFSPNPNSLELYIQCLCESGLIE 155
YG P+ V+ + + + ++ +AM+ L + + + I LC+ G ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 156 EAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLI 206
AF F++++ G+ +I T+N + G R D KL D+I+ LI
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 207 QAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA 266
+F +GK+ E EL ++++ G+ P+ + LI FC++ + + ++++ MV++
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 267 PDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM 326
P+ T+ +ING CK+ + + +F + RG V DTV Y T+I G C++G L A+++
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 327 WFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHK-EMLDKGYGETTV-TYNTLIAGL 384
+ EM+ + + PN TY ++ G C DN E K L E ++K E + YN +I G+
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLC--DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
C + D+A+ LF + KG+ V TYN +I G CK+G +
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 12/336 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G+ P+ ++ + L + L A++ +D G P+ ++ + LC SG EA
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
K+ E G + T+ L K +T L +L D ++ +I
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C G + + L ++ G+ +N LI FC + ++LL M+ R P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
T+ +I+ K K EA + ++ RG PDT+ YT++I G CK L A +M
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
M+ KG PN T+N +I+GYC+ + +++ L ++M +G TVTYNTLI G C G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
+ + A LF+EM + + +++TY L+ G C G+
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 170/346 (49%), Gaps = 14/346 (4%)
Query: 92 FFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCL 148
F +HS P ++ + LF ++ + + + + + ++ G + N +L + I C
Sbjct: 76 FRDMIHSRP--LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCF 133
Query: 149 CESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLG-CIK------IDRTDLVWKLYH--DL 199
C + AF A K+ ++G + T+++ + G C++ ++ D + ++ H DL
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 200 IESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHT 259
I L+ C GK +E L+ +++E G P + +++ C+ ELL
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 260 MVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGW 319
M RN D Y +I+GLCK A+ +FN+++ +G + + Y +I G C G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 320 LGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNT 379
D K+ +MI + + PN T++ +I + + L EA+ LHKEM+ +G T+TY +
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
LI G C D+A + + M KG ++ T+N LI GYCK +I
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 164/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G PDL++ N L + L + AM +D G PN + + +C+SG A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL---------IESGYLIQA 208
K++E + ++ + G K D + L++++ I LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
FCN G+ +G +LLR +++ + P F+ LI F ++ EL M+ R APD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +I+G CK +A ++ + + +G P+ + +I+G CK + D +++
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
+M +G++ + TYN++I G+C + L AK L +EM+ + VTY L+ GLC +G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+++A +FE++ + + D+ YN +I G C K+
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 14/330 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEA----RAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G + ++++ N+L A K+ D + +PN + + I + G + E
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INPNVVTFSVLIDSFVKEGKLRE 351
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQ 207
A ++ G+ T+ S + G K + D ++ ++ G LI
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
+C ++ +G EL R++ G+V + +N LI FCE EL MV+R P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
+ TY+ +++GLC + + +A +F +++ D +Y +IHG+C + DA ++
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+ KG+ P TYN MI G C+ L EA+ L ++M + G+ TYN LI
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQ 417
G ++ L EE+ + G D T +I
Sbjct: 592 GDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 41/264 (15%)
Query: 196 YHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE 255
Y + + SG + D K + +L R ++ +P F++L S + K + V
Sbjct: 56 YRERLRSGLV------DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLA 109
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLC 315
L M + A + +T +IN C+ RK A+ + + GY P+T+ ++T+I+GLC
Sbjct: 110 LCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 169
Query: 316 KMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKG------ 369
G + +A ++ M+ G P+ T N++++G C EA L +M++ G
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 370 -YGET----------------------------TVTYNTLIAGLCLHGRTDEAYHLFEEM 400
YG V Y+ +I GLC HG D A++LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 401 AQKGIFRDVITYNTLIQGYCKEGK 424
KGI ++ITYN LI G+C G+
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGR 313
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 192/410 (46%), Gaps = 31/410 (7%)
Query: 40 YTEIAKQVCKITRTKPRWEQTL-----LSDIPS-FNFNDPLFFREFLKQQNNVLLSIRFF 93
+T + K +C RT + L L IP+ F++N + L +N ++
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYN---ILLKGLCDENRSQEALELL 181
Query: 94 QWLHSHYGFS--PDLVS----CNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELYIQC 147
+ G PD+VS N F +A+ + LD G P+ + I
Sbjct: 182 HMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR-GILPDVVTYNSIIAA 240
Query: 148 LCESGLIEEAFCAFSKLKEMGVFGSIKTWNSAL------------LGCIKIDRTDLVWKL 195
LC++ +++A + + + GV T+NS L +G +K R+D V
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP- 299
Query: 196 YHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE 255
D++ L+ C +G+ E ++ + + GL PE T + L+ + K +
Sbjct: 300 --DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLC 315
LL MV PD++ + +I K K +A VF+ ++++G P+ V Y VI LC
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 316 KMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTV 375
K G + DA + +MI +GL P YNS+IHG C + E A+ L EMLD+G T+
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 376 TYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+N++I C GR E+ LFE M + G+ +VITYNTLI GYC GK+
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 140/258 (54%), Gaps = 15/258 (5%)
Query: 183 CIKIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYEL-LRQVLEDGLVP 232
C + R DL + ++I+ G+ L++ C D + S+ ++ LR++ E G +P
Sbjct: 97 CCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 156
Query: 233 ENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA----PDNFTYEEVINGLCKSRKRLEA 288
++N L+ C++ ELLH M+A +R PD +Y VING K +A
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLH-MMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 289 YRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHG 348
Y ++++ +RG +PD V Y ++I LCK + A ++ M+ G++P+ TYNS++HG
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 349 YCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRD 408
YC +EA K+M G VTY+ L+ LC +GR EA +F+ M ++G+ +
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Query: 409 VITYNTLIQGYCKEGKIV 426
+ TY TL+QGY +G +V
Sbjct: 336 ITTYGTLLQGYATKGALV 353
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 164/368 (44%), Gaps = 47/368 (12%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G PD ++ N + + K A+ FL S G P+ + L + LC++G EA
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLG---------------------------------CI 184
F + + G+ I T+ + L G C
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 185 -----KIDRTDLVWK------LYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPE 233
K+D+ LV+ L + + G +I C G+V + Q++++GL P
Sbjct: 381 YAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 234 NTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFN 293
N +N LI C + R EL+ M+ R + + +I+ CK + +E+ ++F
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 294 DLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRID 353
+ G P+ + Y T+I+G C G + +A K+ M+ GL PN TY+++I+GYC+I
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 354 NLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYN 413
+E+A L KEM G +TYN ++ GL RT A L+ + + G ++ TYN
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 414 TLIQGYCK 421
++ G CK
Sbjct: 621 IILHGLCK 628
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 169/377 (44%), Gaps = 51/377 (13%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDF----LDSTGFSPNPNSLELYIQCLCESGLIEE 156
GF D ++ L L + AMD + G PN S + ++ LC+ +E
Sbjct: 117 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQE 176
Query: 157 AFCAFSKLKEMGVFGS---IKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL-------- 205
A + + GS + ++ + + G K +D + YH++++ G L
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 206 -IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
I A C + + E+L ++++G++P+ +N ++ +C L M +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVI------------H 312
PD TY +++ LCK+ + +EA ++F+ + +RG P+ Y T++ H
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 313 GL-----------------------CKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGY 349
GL K G + A ++ +M +GL PN TY ++I
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 350 CRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDV 409
C+ +E+A ++M+D+G + YN+LI GLC + + A L EM +GI +
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 410 ITYNTLIQGYCKEGKIV 426
I +N++I +CKEG+++
Sbjct: 477 IFFNSIIDSHCKEGRVI 493
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 153/339 (45%), Gaps = 18/339 (5%)
Query: 101 GFSPDLVSCNVLFD------SLVEARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLI 154
G P++ + L +LVE +D + G P+ + I + G +
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGL---LDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 155 EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------L 205
++A FSK+++ G+ + T+ + + K R + + +I+ G L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
I C K EL+ ++L+ G+ FN +I C++ +L MV
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
P+ TY +ING C + K EA ++ + + G P+TV Y+T+I+G CK+ + DA
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 326 MWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLC 385
++ EM G+ P+ TYN ++ G + AK L+ + + G TYN ++ GLC
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 386 LHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
+ TD+A +F+ + + + T+N +I K G+
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 135/337 (40%), Gaps = 44/337 (13%)
Query: 133 GFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLV 192
G +PN + I LC+SG +E+A F ++ + G+ +NS + G ++ +
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 193 WKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISR 243
+L ++++ G +I + C +G+V E +L ++ G+ P +N LI+
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLING 520
Query: 244 FCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPD 303
+C +LL MV+ P+ TY +ING CK + +A +F +++ G PD
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 304 TVMYTTVI-----------------------------------HGLCKMGWLGDARKMWF 328
+ Y ++ HGLCK DA +M+
Sbjct: 581 IITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
+ L T+N MI ++ +EAK L G TY + + G
Sbjct: 641 NLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+E LF M G D N +++ + G+I
Sbjct: 701 LLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 267 PDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM 326
PD TY +I C++ + + ++ ++G+ D + +T ++ GLC DA +
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 327 WF-EMIHKGLLPNEYTYNSMIHGYCRIDNLEEA-KRLHKEMLDKGYGE--TTVTYNTLIA 382
M G +PN ++YN ++ G C + +EA + LH D+G G V+Y T+I
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 383 GLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
G G +D+AY + EM +GI DV+TYN++I CK
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 337 PNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHL 396
P+ TY +I CR L+ ++ KG+ + + L+ GLC RT +A +
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 397 -FEEMAQKGIFRDVITYNTLIQGYCKEGK 424
M + G +V +YN L++G C E +
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENR 173
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 322 DARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETT---VTYN 378
DAR ++ E++ +G + Y N + R D+ A + M G E T TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 379 TLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
LI C GR D + + +KG D I + L++G C + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKR 137
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 160/337 (47%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD+V+ + L + + A+ +D + PN + I L EA
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVW---------KLYHDLIESGYLIQA 208
++ G + T+ + + G K DL K+ D++ +I A
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN V++ L ++ G+ P +N LI C + S LL M+ R P+
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
T+ +I+ K K +EA ++++++ +R PD Y+++I+G C L +A+ M+
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
MI K PN TYN++I G+C+ +EE L +EM +G TVTYNTLI GL G
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
D A +F++M G+ D+ITY+ L+ G CK GK+
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 163/336 (48%), Gaps = 12/336 (3%)
Query: 102 FSPDLVSCNVLFDSLV---EARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAF 158
+ P+ V+ N L L +A +D + + G P+ + + LC+ G I+ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 159 CAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAF 209
K+++ + + + + + + L+ ++ G LI+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 210 CNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDN 269
CN G+ S+ LL ++E + P F+ LI F ++ +L M+ R+ PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 270 FTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFE 329
FTY +ING C + EA +F + + P+ V Y T+I G CK + + +++ E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 330 MIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGR 389
M +GL+ N TYN++I G + + + A+++ K+M+ G +TY+ L+ GLC +G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 390 TDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
++A +FE + + + D+ TYN +I+G CK GK+
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 516
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 14/332 (4%)
Query: 105 DLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCAF 161
D+V + D+L + A++ +D+ G PN + I+CLC G +A
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 162 SKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCND 212
S + E + ++ T+++ + +K + KLY ++I+ LI FC
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 213 GKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTY 272
++ E + ++ P +N LI FC+ K EL M R + TY
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 273 EEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIH 332
+I GL ++ A ++F + G PD + Y+ ++ GLCK G L A + FE +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-VVFEYLQ 492
Query: 333 KGLL-PNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
K + P+ YTYN MI G C+ +E+ L + KG + Y T+I+G C G +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
EA LF EM + G + TYNTLI+ ++G
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 79/351 (22%)
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLV---------WKLYHDLIESGY 204
+++A F ++ + SI +N L K+++ DLV ++ +DL
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
LI FC ++ +L ++++ G P+ + L++ +C K L+ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWL---- 320
P+ T+ +I+GL K EA + + + RG PD Y TV++GLCK G +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 321 -------------------------------GDARKMWFEMIHKGLLPNEYTYNSMIHGY 349
DA ++ EM +KG+ PN TYNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 350 CR-----------------------------ID------NLEEAKRLHKEMLDKGYGETT 374
C ID L EA++L+ EM+ +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 375 VTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
TY++LI G C+H R DEA H+FE M K F +V+TYNTLI+G+CK ++
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 149/329 (45%), Gaps = 14/329 (4%)
Query: 101 GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G P++V+ N L L + A ++ D ++ +PN + I + G + E
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVE 343
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQ 207
A + ++ + + I T++S + G DR D ++ +I LI+
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
FC +V EG EL R++ + GLV +N LI + + ++ MV+ P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D TY +++GLCK K +A VF L++ PD Y +I G+CK G + D ++
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+ KG+ PN Y +MI G+CR EEA L +EM + G + TYNTLI
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
G + L +EM G D T + +I
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%)
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
D K+ + +L ++++ +P FNKL+S + F V L M + D ++
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +IN C+ + A V + + GY PD V +++++G C + +A + +M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
PN T+N++IHG + EA L M+ +G TY T++ GLC G D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
A L ++M + I DV+ Y T+I C
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALC 266
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 99/232 (42%), Gaps = 27/232 (11%)
Query: 136 PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL 195
PN + I+ C++ +EE F ++ + G+ G+ T+N+ + G + D+ K+
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 196 YHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCE 246
+ ++ G L+ C GK+ + + + + + P+ +N +I C+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 247 KKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVM 306
+L ++ + P+ Y +I+G C+ + EA +F ++KE G +P++
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 307 YTTVIHGLCK----------------MGWLGDAR--KMWFEMIHKGLLPNEY 340
Y T+I + G++GDA M M+H G L Y
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 165/360 (45%), Gaps = 40/360 (11%)
Query: 76 FREFLKQQNNVLLSIRF-------FQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF 128
+RE K + L SIRF F+ +HS P +V L + R ++ + F
Sbjct: 38 YRE--KLRTGFLHSIRFEDAFALFFEMVHSQP--LPSIVDFTRLLTATANLRRYETVIYF 93
Query: 129 ---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIK 185
++ G S + S + I C C + A K+ ++G SI T+
Sbjct: 94 SQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF--------- 144
Query: 186 IDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFC 245
G L+ FC ++ + + L+ +++ G P +N LI C
Sbjct: 145 -----------------GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 246 EKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTV 305
+ ELL+ M + D TY ++ GLC S + +A R+ D+ +R PD V
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 306 MYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEM 365
+T +I K G L +A++++ EMI + PN TYNS+I+G C L +AK+ M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 366 LDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
KG VTYNTLI+G C DE LF+ M+ +G D+ TYNTLI GYC+ GK+
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 152/336 (45%), Gaps = 14/336 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEAR----AFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G+ P +V+ L AF + + + S G+ PN I LC++G +
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS-GYEPNVVVYNTLIDGLCKNGELNI 194
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQ 207
A +++++ G+ + T+N+ L G R ++ D+++ LI
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
F G + E EL +++++ + P N +N +I+ C + M ++ P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
+ TY +I+G CK R E ++F + G+ D Y T+IHG C++G L A ++
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
M+ + + P+ T+ ++HG C +E A +M + V YN +I GLC
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
+ ++A+ LF + +G+ D TY +I G CK G
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 12/247 (4%)
Query: 102 FSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAF 158
+PD+V+ L D V+ A + + + PN + I LC G + +A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 159 CAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAF 209
F + G F ++ T+N+ + G K D KL+ + G+ LI +
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 210 CNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDN 269
C GK+ ++ ++ + P+ L+ C M +
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421
Query: 270 FTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFE 329
Y +I+GLCK+ K +A+ +F L G PD YT +I GLCK G +A ++
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Query: 330 MIHKGLL 336
M +G++
Sbjct: 482 MKEEGII 488
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMD---FLDSTGFSPNPNSLELYI 145
++ FQ + S GF+ D+ + N L + +VA+D ++ S +P+ + + +
Sbjct: 335 GMKLFQRM-SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 146 QCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY- 204
LC +G IE A F ++E + I +N + G K D+ + W+L+ L G
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 205 --------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTA 236
+I C +G E EL+R++ E+G++ + A
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 168/339 (49%), Gaps = 12/339 (3%)
Query: 98 SHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLI 154
+ +GFSP++V L D + + A D + G N + + I L ++G+
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK 249
Query: 155 EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------L 205
++ F + K++E GVF ++ T+N + K RT ++++ ++ E G L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
I C + K++E +++ Q+ DG+ P +N LI FC G+ L + +R
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
+P TY +++G C+ A ++ +++ERG P V YT +I + + A +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 326 MWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLC 385
+ M GL+P+ +TY+ +IHG+C + EA RL K M++K V YNT+I G C
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 386 LHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
G + A L +EM +K + +V +Y +I+ CKE K
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 159/331 (48%), Gaps = 12/331 (3%)
Query: 105 DLVSCNVLFDSLVEARAFKVAMDFL---DSTGFSPNPNSLELYIQCLCESGLIEEAFCAF 161
D+ S +L EA + + D L GFSPN I C+ G IE+A F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 162 SKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCND 212
++ ++G+ + +T+ + G K +++Y + E G ++ C D
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 213 GKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTY 272
G+ + +++ ++ E G+ +N LI C + ++++ M + P+ TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 273 EEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIH 332
+I+G C K +A + DLK RG P V Y ++ G C+ G A KM EM
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 333 KGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDE 392
+G+ P++ TY +I + R DN+E+A +L M + G TY+ LI G C+ G+ +E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 393 AYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
A LF+ M +K + + YNT+I GYCKEG
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 10/308 (3%)
Query: 107 VSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKE 166
V N LF + V+ + F++ + + G PN + + LC+ G ++AF F +++E
Sbjct: 238 VLINGLFKNGVKKQGFEM-YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 167 MGVFGSIKTWNSALLGC---IKIDRTD-LVWKLYHD-----LIESGYLIQAFCNDGKVSE 217
GV +I T+N+ + G +K++ + +V ++ D LI LI FC GK+ +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVIN 277
L R + GL P +N L+S FC K + ++++ M R P TY +I+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 278 GLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLP 337
+S +A ++ ++E G VPD Y+ +IHG C G + +A +++ M+ K P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 338 NEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLF 397
NE YN+MI GYC+ + A +L KEM +K +Y +I LC ++ EA L
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 398 EEMAQKGI 405
E+M GI
Sbjct: 537 EKMIDSGI 544
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%)
Query: 194 KLYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRV 253
K+ D+ G LI+ C G++ + ++LL ++ E G P + LI C+K +
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 254 SELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHG 313
+L M + TY +INGL K+ + + + ++ ++E G P+ Y V++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 314 LCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGET 373
LCK G DA +++ EM +G+ N TYN++I G CR L EA ++ +M G
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 374 TVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
+TYNTLI G C G+ +A L ++ +G+ ++TYN L+ G+C++G
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 127/286 (44%), Gaps = 12/286 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G P+L + N + + L + K A D G S N + I LC + EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
++K G+ ++ T+N+ + G + + L DL G L+
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
FC G S ++++++ E G+ P + LI F N + +L +M PD
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +I+G C + EA R+F + E+ P+ V+Y T+I G CK G A K+
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETT 374
EM K L PN +Y MI C+ +EA+RL ++M+D G +T
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 35/206 (16%)
Query: 254 SELLHTMVARNRAPDNF-TYEEVINGLCKSRKRLEAYRVFNDLKERGYVP---------- 302
S LLH + + F YE +IN +S+ + FN++ + G+VP
Sbjct: 78 SSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLT 137
Query: 303 ------------------------DTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPN 338
D + +I G C+ G + + + E+ G PN
Sbjct: 138 FVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPN 197
Query: 339 EYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFE 398
Y ++I G C+ +E+AK L EM G TY LI GL +G + + ++E
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYE 257
Query: 399 EMAQKGIFRDVITYNTLIQGYCKEGK 424
+M + G+F ++ TYN ++ CK+G+
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQLCKDGR 283
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 27/291 (9%)
Query: 40 YTEIAKQVCKITRTKPRW-------EQTLLSDIPSFNFNDPLFFREF-LKQQNNVLLSIR 91
Y + Q+CK RTK + E+ + +I ++N RE L + N V+ ++
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 92 FFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCL 148
G +P+L++ N L D A+ L S G SP+ + + +
Sbjct: 331 -------SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 149 CESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG----- 203
C G A +++E G+ S T+ + + D + +L + E G
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 204 ----YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHT 259
LI FC G+++E L + ++E P +N +I +C++ + R +LL
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 260 MVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTV 310
M + AP+ +Y +I LCK RK EA R+ + + G P T + + +
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 160/332 (48%), Gaps = 12/332 (3%)
Query: 102 FSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEAF 158
SPD+V+ N + SL ++ K AM+ LD P+ + + I+ C + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 159 CAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQAF 209
++++ G + T+N + G K R D K +D+ SG ++++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 210 CNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDN 269
C+ G+ + +LL +L G P FN LI+ C K GR ++L M P++
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 270 FTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFE 329
+Y +++G CK +K A + RG PD V Y T++ LCK G + DA ++ +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 330 MIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGR 389
+ KG P TYN++I G + +A +L EM K T+TY++L+ GL G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 390 TDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
DEA F E + GI + +T+N+++ G CK
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 174/347 (50%), Gaps = 19/347 (5%)
Query: 93 FQWLHS--HYGFSPDLVSCNVL---FDSLVEARAFKVAMDFLDSTGFSPNPNSLELYIQC 147
F++L + ++G PD++ C L F L + R ++ L+ +G P+ + + I
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181
Query: 148 LCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALL-----GCIK-----IDRTDLVWKLYH 197
C++G I A S L M V + T+N+ L G +K +DR L Y
Sbjct: 182 YCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM-LQRDCYP 237
Query: 198 DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELL 257
D+I LI+A C D V +LL ++ + G P+ +N L++ C++ + L
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 258 HTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKM 317
+ M + P+ T+ ++ +C + + ++A ++ D+ +G+ P V + +I+ LC+
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 318 GWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTY 377
G LG A + +M G PN +YN ++HG+C+ ++ A + M+ +G VTY
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 378 NTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
NT++ LC G+ ++A + +++ KG +ITYNT+I G K GK
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 12/332 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEAFCA 160
PD+++ +L ++ AM LD G +P+ + + + +C+ G ++EA
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
+ + G ++ T N L R KL D++ G+ LI C
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
G + ++L ++ + G P + ++N L+ FC++K R E L MV+R PD T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y ++ LCK K +A + N L +G P + Y TVI GL K G G A K+ EM
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
K L P+ TY+S++ G R ++EA + E G VT+N+++ GLC +TD
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
A M +G + +Y LI+G EG
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Score = 128 bits (322), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 156/323 (48%), Gaps = 20/323 (6%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G +PD+V+ NVL + + + A+ FL+ S+G PN + + ++ +C +G +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 158 FCAFSKLKEMGVFGSIKTWN--------SALLGCIKIDRTDLVWKLYH-----DLIESGY 204
+ + G S+ T+N LLG D++ K+ + +
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLG----RAIDILEKMPQHGCQPNSLSYNP 384
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
L+ FC + K+ E L +++ G P+ +N +++ C+ E+L+ + ++
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
+P TY VI+GL K+ K +A ++ ++++ + PDT+ Y++++ GL + G + +A
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
K + E G+ PN T+NS++ G C+ + A M+++G +Y LI GL
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 385 CLHGRTDEAYHLFEEMAQKGIFR 407
G EA L E+ KG+ +
Sbjct: 565 AYEGMAKEALELLNELCNKGLMK 587
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 200 IESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHT 259
+ES ++ G++ EG++ L ++ G VP+ LI FC + +++L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 260 MVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGW 319
+ PD TY +I+G CK+ + A V + + PD V Y T++ LC G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGK 219
Query: 320 LGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNT 379
L A ++ M+ + P+ TY +I CR + A +L EM D+G VTYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
L+ G+C GR DEA +M G +VIT+N +++ C G+
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 287 EAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMI 346
E ++ ++ G VPD + TT+I G C++G A K+ + G +P+ TYN MI
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 347 HGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIF 406
GYC+ + A + M VTYNT++ LC G+ +A + + M Q+ +
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 407 RDVITYNTLIQGYCKEGKI 425
DVITY LI+ C++ +
Sbjct: 237 PDVITYTILIEATCRDSGV 255
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 343 NSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQ 402
N+ + R LEE + + M+ G + TLI G C G+T +A + E +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 403 KGIFRDVITYNTLIQGYCKEGKIVN 427
G DVITYN +I GYCK G+I N
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINN 190
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 98 SHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLI 154
S G SP L++ N + D L +A A+ LD + P+ + + L G +
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 155 EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YL 205
+EA F + + MG+ + T+NS +LG K +TD +I G L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTA 236
I+ +G E ELL ++ GL+ +++A
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 180/336 (53%), Gaps = 14/336 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELY---IQCLCESGLIEEA 157
G P+LV+ V+ + L + +A + L+ + ++ +Y I LC+ ++A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCI-KIDRTDLVWKLYHDLIES---------GYLIQ 207
F++++ GV ++ T+ S+L+ C+ +R +L D+IE LI
Sbjct: 280 LNLFTEMENKGVRPNVITY-SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
AF +GK+ E +L ++++ + P+ ++ LI+ FC + M++++ P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
+ TY +ING CK+++ E +F ++ +RG V +TV YTT+IHG + +A+ ++
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+M+ G+ PN TYN+++ G C+ LE+A + + + T TYN +I G+C
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
G+ ++ + LF ++ KG+ DVI YNT+I G+C++G
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 166/337 (49%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLV---EARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD ++ L L +A +D + G PN + + + LC+ G I+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
F +K++ + ++ +++ + K D L+ ++ G LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN + S+ LL ++E + P FN LI F ++ +L M+ R+ PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +ING C + EA +F + + P+ V Y T+I+G CK + + +++
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +GL+ N TY ++IHG+ + + + A+ + K+M+ G +TYNTL+ GLC +G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ ++A +FE + + + + TYN +I+G CK GK+
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 155/360 (43%), Gaps = 64/360 (17%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P + N L ++ + + F + + + G S N + + I C C I A
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYE 220
K+ ++G SI T +S L+ +C+ ++S+
Sbjct: 143 LGKMMKLGYEPSIVTLSS--------------------------LLNGYCHGKRISDAVA 176
Query: 221 LLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLC 280
L+ Q++E G P+ F LI L+ MV R P+ TY V+NGLC
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 281 KS-----------------------------------RKRLEAYRVFNDLKERGYVPDTV 305
K R +A +F +++ +G P+ +
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 306 MYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEM 365
Y+++I LC DA ++ +MI + + PN T+N++I + + L EA++L+ EM
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 366 LDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ + TY++LI G C+H R DEA H+FE M K F +V+TYNTLI G+CK +I
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
K+ + L +++ +P FNKL+S + K F V L M + + +TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
+IN C+ + A + + + GY P V +++++G C + DA + +M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G P+ T+ ++IHG + EA L M+ +G VTY ++ GLC G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCK 421
++L +M I +V+ Y+T+I CK
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 102 FSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEAF 158
+P++V+ N L D+ V+ A D P+ + I C ++EA
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 159 CAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAF 209
F + F ++ T+N+ + G K R D +L+ ++ + G LI F
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 210 CNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDN 269
+ +Q++ DG+ P +N L+ C+ + + + P
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 270 FTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFE 329
+TY +I G+CK+ K + + +F L +G PD ++Y T+I G C+ G +A ++ +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 330 MIHKGLLPNEYT 341
M G LP+ T
Sbjct: 566 MREDGPLPDSGT 577
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 185/405 (45%), Gaps = 31/405 (7%)
Query: 35 ESQQLYTEIAKQVC--KITRTKPRWEQTLLSDIPSFNFNDPLFFREFLKQQNNVLLSIRF 92
E L T ++ ++C + + + + L S + S FND L F
Sbjct: 23 EKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTL---------------F 67
Query: 93 FQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLC 149
SH P +V + L ++ + ++ + L+ G S + S I C C
Sbjct: 68 CDMAESHP--LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC 125
Query: 150 ESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY----- 204
+ A K+ ++G SI T+ S + G ++R L ++ GY
Sbjct: 126 RCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVV 185
Query: 205 ----LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTM 260
+I + C G+V+ ++L+ + + G+ P+ +N LI+R +G + +L M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 261 VARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWL 320
+ +PD T+ +I+ K + LEA + +N++ +R P+ V Y ++I+GLC G L
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 321 GDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTL 380
+A+K+ ++ KG PN TYN++I+GYC+ +++ ++ M G T TYNTL
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Query: 381 IAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
G C G+ A + M G+ D+ T+N L+ G C GKI
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 148/328 (45%), Gaps = 29/328 (8%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
GF P +V+ L + F AM +D G+ PN I LCE G + A
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTA 203
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSE 217
+K+MG+ + T+NS L+ +L+H G
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNS------------LITRLFHS--------------GTWGV 237
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVIN 277
+L ++ G+ P+ F+ LI + ++ + + M+ R+ P+ TY +IN
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 278 GLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLP 337
GLC EA +V N L +G+ P+ V Y T+I+G CK + D K+ M G+
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 338 NEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLF 397
+ +TYN++ GYC+ A+++ M+ G T+N L+ GLC HG+ +A
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 398 EEMAQKGIFRDVITYNTLIQGYCKEGKI 425
E++ + +ITYN +I+G CK K+
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKV 445
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G PD+V+ N L L + + V+ L G SP+ + I + G + EA
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
++++ + V +I T+NS + G D K+ + L+ G+ LI
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
+C +V +G ++L + DG+ + +N L +C+ F ++L MV+ PD
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+T+ +++GLC K +A DL++ V + Y +I GLCK + DA ++
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEM 365
+ KG+ P+ TY +M+ G R EA L+++M
Sbjct: 454 SLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
K ++ L + E +P F++L+ + + V L + + D +++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
+I+ C+ + A + + G+ P V + ++++G C + +A + +++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G PN YN++I C + A + K M G VTYN+LI L G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
+ +M + GI DVIT++ LI Y KEG+++
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 12/334 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAM---DFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P + + L ++ + + + V + + + G N + + + C C + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G SI T+ S L G + DR ++ ++ GY +I C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+V +LL ++ +DG+ P+ +N LIS C + + ++ M R PD FT
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
+ +I+ K + EA + ++ R PD V Y+ +I+GLC L +A +M+ M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
KG P+ TY+ +I+GYC+ +E +L EM +G TVTY LI G C G+ +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
A +F M G+ ++ITYN L+ G C GKI
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 12/339 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G +L +CN+L + +A+ FL G P+ + + C + +A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
F ++ MG ++ +N+ + G K + D L + D++ LI
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C+ G+ S+ ++ + + + P+ FN LI ++ E M+ R+ PD
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +I GLC + EA +F + +G PD V Y+ +I+G CK + K++
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +G++ N TY +I GYCR L A+ + + M+ G +TYN L+ GLC +G
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
+ ++A + +M + G+ D++TYN +I+G CK G++ +
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 178/379 (46%), Gaps = 14/379 (3%)
Query: 57 WEQTLLSDIPSFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSL 116
WEQ + IP + F + + + L++ F + G P +V+ L +
Sbjct: 104 WEQMQMLGIPHNLCTCNILLNCFCRC-SQLSLALSFLGKM-IKLGHEPSIVTFGSLLNGF 161
Query: 117 VEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSI 173
A+ D G+ PN I LC+S ++ A +++++ G+ +
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 174 KTWNSALLGCIKI----DRTDLVW-----KLYHDLIESGYLIQAFCNDGKVSEGYELLRQ 224
T+NS + G D T +V ++Y D+ LI A +G+VSE E +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 225 VLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRK 284
++ L P+ ++ LI C E+ MV++ PD TY +ING CKS+K
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 285 RLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNS 344
++F ++ +RG V +TV YT +I G C+ G L A +++ M+ G+ PN TYN
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 345 MIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKG 404
++HG C +E+A + +M G VTYN +I G+C G +A+ ++ + +G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 405 IFRDVITYNTLIQGYCKEG 423
+ D+ TY T++ G K+G
Sbjct: 462 LMPDIWTYTTMMLGLYKKG 480
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 142/318 (44%), Gaps = 12/318 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFL---DSTGFSPNPNSLELYIQCLCESGLIEEA 157
G+ P++V N + D L +++ A+D L + G P+ + I LC SG +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
S + + ++ + T+N+ + C+K R + Y D++ LI
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C ++ E E+ ++ G P+ ++ LI+ +C+ K +L M R +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +I G C++ K A +F + G P+ + Y ++HGLC G + A +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
+M G+ + TYN +I G C+ + +A ++ + +G TY T++ GL G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 389 RTDEAYHLFEEMAQKGIF 406
EA LF +M + GI
Sbjct: 481 LRREADALFRKMKEDGIL 498
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
K+ + +L +++ +P F++L+S + K + V L M + T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
++N C+ + A + + G+ P V + ++++G C+ + DA M+ +M+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G PN YN++I G C+ ++ A L M G G VTYN+LI+GLC GR +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ M ++ I+ DV T+N LI KEG++
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 12/248 (4%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEAFCA 160
PD+ + N L D+ V+ A +F + P+ + L I LC ++EA
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
F + G F + T++ + G K + + KL+ ++ + G LIQ +C
Sbjct: 314 FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
GK++ E+ R+++ G+ P +N L+ C+ + +L M D T
Sbjct: 374 AGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +I G+CK+ + +A+ ++ L +G +PD YTT++ GL K G +A ++ +M
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Query: 332 HKGLLPNE 339
G+LPNE
Sbjct: 494 EDGILPNE 501
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%)
Query: 262 ARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLG 321
+R + Y E++ + K ++ +F + + +P ++ ++ + KM
Sbjct: 39 SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 322 DARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLI 381
+W +M G+ N T N +++ +CR L A +M+ G+ + VT+ +L+
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 382 AGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
G C R +A ++F++M G +V+ YNT+I G CK ++ N
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDN 204
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 162/343 (47%), Gaps = 17/343 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G S +L + ++L + +A+ L G+ P+ +L + C I +A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
++ EMG T+N+ + G + +R L DL+ G ++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C G + LL+++ + + P +N +I C KN L M + P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +I LC + +A R+ +D+ ER P+ V ++ +I K G L +A K++
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EMI + + P+ +TY+S+I+G+C D L+EAK + + M+ K VTYNTLI G C
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGY-----CKEGKIV 426
R DE LF EM+Q+G+ + +TY TLI G+ C +IV
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 154/337 (45%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD+V+ N L + A+ + G+ P+ + I L EA
Sbjct: 146 GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL----IESGY-----LIQA 208
++ G + T+ + G K DL L + IE G +I A
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN V++ L ++ G+ P +N LI C + S LL M+ R P+
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
T+ +I+ K K +EA ++++++ +R PD Y+++I+G C L +A+ M+
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
MI K PN TYN++I G+C+ ++E L +EM +G TVTY TLI G
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
D A +F++M G+ D++TY+ L+ G C GK+
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 161/337 (47%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD + N L L A+ +D G P+ + + + LC+ G I+ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
K+++ + + +N+ + + L+ ++ G LI+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN G+ S+ LL ++E + P F+ LI F ++ +L M+ R+ PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +ING C + EA +F + + P+ V Y T+I G CK + + +++
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +GL+ N TY ++IHG+ + + A+ + K+M+ G +TY+ L+ GLC +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ + A +FE + + + D+ TYN +I+G CK GK+
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 167/370 (45%), Gaps = 47/370 (12%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFL---DSTGFSPNPNSLELYIQCLCESGLIEEA 157
G PDLV+ ++ + L + +A+ L + P I LC + +A
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQA 208
F+++ G+ ++ T+NS + R +L D+IE LI A
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F +GK+ E +L ++++ + P+ ++ LI+ FC + M++++ P+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +I G CK+++ E +F ++ +RG V +TV YTT+IHG + +A+ ++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 329 EMIHKGLLPNE-----------------------------------YTYNSMIHGYCRID 353
+M+ G+LP+ YTYN MI G C+
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 354 NLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYN 413
+E+ L + KG VTY T+++G C G +EA LF EM ++G D TYN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 414 TLIQGYCKEG 423
TLI+ + ++G
Sbjct: 576 TLIRAHLRDG 585
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 141/313 (45%), Gaps = 14/313 (4%)
Query: 101 GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G P++V+ N L L + A ++ D ++ +PN + I + G + E
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVE 344
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQ 207
A + ++ + + I T++S + G DR D ++ +I LI+
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
FC +V EG EL R++ + GLV + LI F + + + MV+ P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D TY +++GLC + K A VF L+ PD Y +I G+CK G + D ++
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+ KG+ PN TY +M+ G+CR EEA L +EM ++G + TYNTLI
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 388 GRTDEAYHLFEEM 400
G + L EM
Sbjct: 585 GDKAASAELIREM 597
Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%)
Query: 196 YHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE 255
+ ++E L+ A K L Q+ G+ ++ LI+ FC +
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLC 315
+L M+ PD T ++NG C + +A + + E GY PD+ + T+IHGL
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 316 KMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTV 375
+ +A + M+ KG P+ TY +++G C+ +++ A L K+M V
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 376 TYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
YNT+I LC + ++A +LF EM KGI +V+TYN+LI+ C G+
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%)
Query: 211 NDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNF 270
ND K+ + L +++ P F+KL+S + F V L M + + +
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 271 TYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEM 330
TY +IN C+ + A V + + GY PD V ++++G C + DA + +M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 331 IHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRT 390
+ G P+ +T+N++IHG R + EA L M+ KG VTY ++ GLC G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 391 DEAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
D A L ++M Q I V+ YNT+I C
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%)
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLC 315
L MV P + ++++ + K K + ++ G + Y+ +I+ C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 316 KMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTV 375
+ L A + +M+ G P+ T NS+++G+C + + +A L +M++ GY +
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 376 TYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
T+NTLI GL H R EA L + M KG D++TY ++ G CK G I
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 50/106 (47%)
Query: 320 LGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNT 379
L DA ++ +M+ P+ ++ ++ +++ + L ++M + G TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
LI C + A + +M + G D++T N+L+ G+C +I
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 162/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD + L L A+ +D G P+ + + LC+ G I+ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
K+++ + + +N+ + G K D L+ ++ G LI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN G+ S+ LL ++E + P F+ LI F ++ +L M+ R+ PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +ING C + EA +F + + P+ V Y+T+I G CK + + +++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +GL+ N TY ++IHG+ + + + A+ + K+M+ G +TYN L+ GLC +G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ +A +FE + + + D+ TYN +I+G CK GK+
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 159/331 (48%), Gaps = 12/331 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G S DL + ++ + +A+ L G+ P+ +L + C S I +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
++ EMG T+ + + G ++ L DL+ G ++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C G + LL+++ + + + +N +I C+ K+ L M + PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +I+ LC + +A R+ +D+ ER P+ V ++ +I K G L +A K++
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EMI + + P+ +TY+S+I+G+C D L+EAK + + M+ K VTY+TLI G C
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGY 419
R +E LF EM+Q+G+ + +TY TLI G+
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 143/282 (50%), Gaps = 9/282 (3%)
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL---------YHDLIESGY 204
+++A F + + F SI +N L K+++ +LV L HDL
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
I FC ++S +L ++++ G P+ + L++ +C K L+ MV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
PD FT+ +I+GL K EA + + + +RG PD V Y TV++GLCK G + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
+ +M + + YN++I G C+ ++++A L EM +KG TY++LI+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
C +GR +A L +M ++ I +V+T++ LI + KEGK+V
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 155/338 (45%), Gaps = 15/338 (4%)
Query: 101 GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G PD+ + + L L + A ++ D ++ +PN + I + G + E
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVE 346
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQ 207
A + ++ + + I T++S + G DR D ++ +I LI+
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
FC +V EG EL R++ + GLV + LI F + ++ + MV+ P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
+ TY +++GLCK+ K +A VF L+ PD Y +I G+CK G + D +++
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+ KG+ PN YN+MI G+CR + EEA L K+M + G + TYNTLI
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
G + + L +EM G D T L+ +G++
Sbjct: 587 GDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 623
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%)
Query: 214 KVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYE 273
KV + +L +++ P FNKL+S + F V L M + D +TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 274 EVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHK 333
IN C+ + A V + + GY PD V +++++G C + DA + +M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 334 GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
G P+ +T+ ++IHG + EA L +M+ +G VTY T++ GLC G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 394 YHLFEEMAQKGIFRDVITYNTLIQGYCK 421
L ++M + I DV+ YNT+I G CK
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCK 270
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 165/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLV---EARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD ++ L L +A +D + G PN + + + LC+ G I+ A
Sbjct: 110 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
F +K++ + + +N+ + K D L+ ++ G LI
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C+ G+ S+ +LL ++E + P FN LI F ++ F +L M+ R+ PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +ING C + +A ++F + + PD Y T+I G CK + D +++
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM H+GL+ + TY ++I G + + A+++ K+M+ G +TY+ L+ GLC +G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ ++A +F+ M + I D+ Y T+I+G CK GK+
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 170/335 (50%), Gaps = 14/335 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELY---IQCLCESGLIEEA 157
G P+LV+ V+ + L + +A + L+ + + ++ I LC+ +++A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCI-KIDRTDLVWKLYHDLIES---------GYLIQ 207
F +++ G+ ++ T+ S+L+ C+ R +L D+IE LI
Sbjct: 205 LNLFKEMETKGIRPNVVTY-SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
AF +GK E +L +++ + P+ +N LI+ FC + ++ MV+++ P
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D TY +I G CKS++ + +F ++ RG V DTV YTT+I GL G +A+K++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+M+ G+ P+ TY+ ++ G C LE+A + M Y T+I G+C
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKE 422
G+ D+ + LF ++ KG+ +V+TYNT+I G C +
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 161/371 (43%), Gaps = 47/371 (12%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P + N L ++ + + F + + + G S N + + I C C I A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G SI T +S L G R L ++E GY LI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
K SE L+ ++++ G P + +++ C++ + LL+ M A D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
+ +I+ LCK R +A +F +++ +G P+ V Y+++I LC G DA ++ +MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 332 HKGLLPNE-----------------------------------YTYNSMIHGYCRIDNLE 356
K + PN +TYNS+I+G+C D L+
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 357 EAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
+AK++ + M+ K TYNTLI G C R ++ LF EM+ +G+ D +TY TLI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 417 QGYCKEGKIVN 427
QG +G N
Sbjct: 368 QGLFHDGDCDN 378
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 148/343 (43%), Gaps = 47/343 (13%)
Query: 105 DLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESG--------- 152
D+V N + DSL + R A++ +++ G PN + I CLC G
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 153 --LIE--------------EAFCAFSKLKEM----------GVFGSIKTWNSALLGCIKI 186
+IE +AF K E + I T+NS + G
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 187 DRTDLVWKLYH---------DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAF 237
DR D +++ DL LI+ FC +V +G EL R++ GLV + +
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 238 NKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKE 297
LI + ++ MV+ PD TY +++GLC + K +A VF+ +++
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 298 RGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEE 357
D +YTT+I G+CK G + D ++ + KG+ PN TYN+MI G C L+E
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 358 AKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEM 400
A L K+M + G + TYNTLI G + L EM
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 92/191 (48%)
Query: 231 VPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYR 290
+P FNKL+S + K F V L M + + +TY +IN C+ + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 291 VFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYC 350
+ + + GY P V +++++G C + DA + +M+ G P+ T+ ++IHG
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 351 RIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVI 410
+ EA L M+ +G VTY ++ GLC G D A++L +M I DV+
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 411 TYNTLIQGYCK 421
+NT+I CK
Sbjct: 187 IFNTIIDSLCK 197
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%)
Query: 260 MVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGW 319
MV P F + ++++ + K +K + ++ G + Y +I+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 320 LGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNT 379
+ A + +M+ G P+ T +S+++GYC + +A L +M++ GY T+T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
LI GL LH + EA L + M Q+G +++TY ++ G CK G I
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 163/343 (47%), Gaps = 12/343 (3%)
Query: 95 WLHSHYGFSPDLVSCNVLFDSLVEARAFK---VAMDFLDSTGFSPNPNSLELYIQCLCES 151
W+ SPD +C + + LV R F V + S G P+ + + QC +
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 152 GLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL------ 205
GL + ++ +G+ ++ + +L + ++ + K++ + + G L
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 206 ---IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVA 262
I +C G V + Y L +++L L+P F L+ FC+ + L MV
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 263 RNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGD 322
P+ + Y +I+G CKS LEA + ++++ PD YT +I+GLC + +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 323 ARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIA 382
A +++ +M ++ + P+ TYNS+IHGYC+ N+E+A L EM G +T++TLI
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 383 GLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
G C A L+ EM KGI DV+TY LI + KE +
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 157/337 (46%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G PD+ VLF + + LD S G PN +YI LC +EEA
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQA 208
F +K+ GV ++ T+++ + G K + LY +++ + G L+
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
FC ++ L +++ G+ P +N LI C+ N LL M + N +PD
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +INGLC + EA R+F +K P + Y ++IHG CK + A +
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM G+ PN T++++I GYC + +++ A L+ EM KG VTY LI
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEA 493
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
EA L+ +M + GI + T+ L+ G+ KEG++
Sbjct: 494 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%)
Query: 232 PENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRV 291
P++ A +++ ++ F V M++R PD Y + K + ++
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 292 FNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCR 351
+++ G P+ +YT I LC+ + +A KM+ M G+LPN YTY++MI GYC+
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 352 IDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVIT 411
N+ +A L+KE+L V + TL+ G C A LF M + G+ ++
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 412 YNTLIQGYCKEGKIV 426
YN LI G+CK G ++
Sbjct: 342 YNCLIHGHCKSGNML 356
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 136/337 (40%), Gaps = 18/337 (5%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMD-FLDSTGFSPNPNSLELYI-QCL----CESGLIEEA 157
P++V L D +AR A F+ F +PN LY+ CL C+SG + EA
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN---LYVYNCLIHGHCKSGNMLEA 358
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL---------IESGYLIQA 208
S+++ + + + T+ + G D+ +L+ + LI
Sbjct: 359 VGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
+C + + + +L ++ G+ P F+ LI +C ++ L M + PD
Sbjct: 419 YCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY +I+ K EA R+++D+ E G P+ + ++ G K G L A +
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ 538
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
E + N + +I G C+ + A R +M G +Y +++ G
Sbjct: 539 ENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
R + L +M + GI +++ L + Y G +
Sbjct: 599 RITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYV 635
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 183/365 (50%), Gaps = 23/365 (6%)
Query: 80 LKQQNNVLLSIRFFQWLHS-HYGFSPDLVSCNVLFDSLV-EARAFKVAMDF--LDSTGFS 135
L NN + F + S +YG+ +SC L +L+ E R+ V + +
Sbjct: 161 LAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQ 220
Query: 136 PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKID------RT 189
PN + + I LC++G + +A +K G ++ ++N+ + G K+ +
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 190 DLVWK------LYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISR 243
D V K + +L LI F D + ++ +++L+ + P ++N LI+
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 244 FCEKKNFGRVSELLHT---MVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGY 300
C N G++SE + MV+ P+ TY +ING CK+ EA +F +K +G
Sbjct: 341 LC---NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 301 VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKR 360
VP T MY +I CK+G + D + EM +G++P+ TYN +I G CR N+E AK+
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 361 LHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
L ++ KG + VT++ L+ G C G + +A L +EM++ G+ +TYN +++GYC
Sbjct: 458 LFDQLTSKGLPDL-VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 421 KEGKI 425
KEG +
Sbjct: 517 KEGNL 521
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 193/416 (46%), Gaps = 47/416 (11%)
Query: 55 PRWEQTLLSD-----------IPSFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFS 103
PR++ +++D + + N FR+ + + + L +R++ WL + S
Sbjct: 39 PRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDIS 98
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELY--------IQCLCESGLIE 155
L L SL A+ + FLD GF N + +++ +C + +I
Sbjct: 99 VSLELTFKLLHSLANAKRYSKIRSFLD--GFVRNGSDHQVHSIFHAISMCDNVCVNSIIA 156
Query: 156 EAFC-----------AFSKLKEMGVFG---SIKTWNSALLGCIKIDRTDLVWKLYHDLIE 201
+ F K G +G S + ++ +K +R+ V +Y ++I
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 202 S---------GYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGR 252
+I A C GK+++ +++ + G P ++N LI +C+ G+
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 253 V---SELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTT 309
+ +L MV + +P+ T+ +I+G K + +VF ++ ++ P+ + Y +
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 310 VIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKG 369
+I+GLC G + +A M +M+ G+ PN TYN++I+G+C+ D L+EA + + +G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 370 YGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
TT YN LI C G+ D+ + L EEM ++GI DV TYN LI G C+ G I
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 139/326 (42%), Gaps = 33/326 (10%)
Query: 103 SPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAF 158
SP+L + N+L D + + KV + LD PN S I LC G I EA
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD-VKPNVISYNSLINGLCNGGKISEAI 351
Query: 159 CAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEG 218
K+ GV ++ T+N+ LI FC + + E
Sbjct: 352 SMRDKMVSAGVQPNLITYNA--------------------------LINGFCKNDMLKEA 385
Query: 219 YELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVING 278
++ V G VP +N LI +C+ L M PD TY +I G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 279 LCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPN 338
LC++ A ++F+ L +G +PD V + ++ G C+ G A + EM GL P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 339 EYTYNSMIHGYCRIDNLEEAKRLHKEM-LDKGYGETTVTYNTLIAGLCLHGRTDEAYHLF 397
TYN ++ GYC+ NL+ A + +M ++ +YN L+ G G+ ++A L
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 398 EEMAQKGIFRDVITYNTLIQGYCKEG 423
EM +KG+ + ITY + + +G
Sbjct: 565 NEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G P+L++ N L + + K A+D S G P + I C+ G I++
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY--------LIQAF 209
F +++ G+ + T+N + G + + KL+ L G L++ +
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGY 480
Query: 210 CNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDN 269
C G+ + LL+++ + GL P + +N ++ +C++ N + + M R N
Sbjct: 481 CRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 270 F-TYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+Y ++ G + K +A + N++ E+G VP+ + Y V + G++ D F
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600
Query: 329 EMIHK 333
+ K
Sbjct: 601 NVSTK 605
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 164/337 (48%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLV---EARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD ++ L L +A +D + G PN + + + LC+ G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
+K++ + + +N+ + K D L+ ++ G LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C+ G+ S+ +LL ++E + P FN LI F ++ F +L M+ R+ PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY ++NG C + +A ++F + + PD V Y T+I G CK + D +++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM H+GL+ + TY ++I G + + A+++ K+M+ G +TY+ L+ GLC +G
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ ++A +F+ M + I D+ Y T+I+G CK GK+
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 171/335 (51%), Gaps = 14/335 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELY---IQCLCESGLIEEA 157
G P+LV+ V+ + L + +A++ L+ + + ++ I LC+ +++A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCI-KIDRTDLVWKLYHDLIES---------GYLIQ 207
F +++ G+ ++ T+ S+L+ C+ R +L D+IE LI
Sbjct: 280 LNLFKEMETKGIRPNVVTY-SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
AF +GK E +L +++ + P+ +N L++ FC + ++ MV+++ P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D TY +I G CKS++ + +F ++ RG V DTV YTT+I GL G +A+K++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+M+ G+ P+ TY+ ++ G C LE+A + M Y T+I G+C
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKE 422
G+ D+ + LF ++ KG+ +V+TYNT+I G C +
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 47/371 (12%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELY---IQCLCESGLIEEAFCA 160
P +V N L ++ + + F V + + + L Y I C C I A
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
K+ ++G SI T +S L G R L ++E GY LI
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
K SE L+ ++++ G P + +++ C++ + LL+ M A D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDA-------- 323
+ +I+ LCK R +A +F +++ +G P+ V Y+++I LC G DA
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 324 ---------------------------RKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLE 356
K++ +MI + + P+ +TYNS+++G+C D L+
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 357 EAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
+AK++ + M+ K VTYNTLI G C R ++ LF EM+ +G+ D +TY TLI
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 417 QGYCKEGKIVN 427
QG +G N
Sbjct: 443 QGLFHDGDCDN 453
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 9/282 (3%)
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL---------YHDLIESGY 204
+++A F + + SI +N L K+ + D+V L H L
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
LI FC ++S LL ++++ G P + L++ +C K L+ MV
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
PD T+ +I+GL K EA + + + +RG P+ V Y V++GLCK G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
+ +M + + +N++I C+ ++++A L KEM KG VTY++LI+ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
C +GR +A L +M +K I +++T+N LI + KEGK V
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 47/343 (13%)
Query: 105 DLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCAF 161
D+V N + DSL + R A++ +++ G PN + I CLC G +A
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 162 SKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIE--------------SGY--- 204
S + E + ++ T+N+ + +K + KLY D+I+ +G+
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 205 ---------------------------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAF 237
LI+ FC +V +G EL R++ GLV + +
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 238 NKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKE 297
LI + ++ MV+ PD TY +++GLC + K +A VF+ +++
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 298 RGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEE 357
D +YTT+I G+CK G + D ++ + KG+ PN TYN+MI G C L+E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 358 AKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEM 400
A L K+M + G + TYNTLI G + L EM
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%)
Query: 211 NDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNF 270
+D K+ + L +++ +P FNKL+S + K F V L M +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 271 TYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEM 330
TY +IN C+ + A + + + GY P V +++++G C + DA + +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 331 IHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRT 390
+ G P+ T+ ++IHG + EA L M+ +G VTY ++ GLC G T
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 391 DEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
D A +L +M I DV+ +NT+I CK
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 126 MDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIK 185
MDF D P S + L +SG ++A + ++++ G+ + ++ + K
Sbjct: 102 MDFYDC---EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCK 158
Query: 186 IDRTDLVWKLYHDLIESG---------YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTA 236
R +L +++ G ++ F + +EGYEL ++L G+ +
Sbjct: 159 TSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLST 218
Query: 237 FNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLK 296
FNKL+ C+K + +LL ++ R P+ FTY I GLC+ + A R+ L
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 297 ERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLE 356
E+G PD + Y +I+GLCK +A +M+++GL P+ YTYN++I GYC+ ++
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 357 EAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
A+R+ + + G+ TY +LI GLC G T+ A LF E KGI +VI YNTLI
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 417 QGYCKEGKIV 426
+G +G I+
Sbjct: 399 KGLSNQGMIL 408
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 157/363 (43%), Gaps = 22/363 (6%)
Query: 85 NVLLSIRFFQWLHSHY------GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNP 138
+VL+ +F H Y G +PD+ S + S + A+ L++ S
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNN--MSSQG 176
Query: 139 NSLELYIQCLCESGLIEEAFCA-----FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVW 193
+ + C G EE F A F K+ GV + T+N L K
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 194 KLYHDLIESGYL---------IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRF 244
KL +I+ G L IQ C G++ ++ ++E G P+ +N LI
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 245 CEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDT 304
C+ F L MV PD++TY +I G CK A R+ D G+VPD
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 305 VMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKE 364
Y ++I GLC G A ++ E + KG+ PN YN++I G + EA +L E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 365 MLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
M +KG T+N L+ GLC G +A L + M KG F D+ T+N LI GY + K
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 425 IVN 427
+ N
Sbjct: 477 MEN 479
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 157/372 (42%), Gaps = 47/372 (12%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G S L + N L L + K LD G PN + L+IQ LC+ G ++ A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
L E G + T+N+ + G K + ++ G LI
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
+C G V ++ + +G VP+ + LI C + R L + + + P+
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
Y +I GL LEA ++ N++ E+G +P+ + +++GLCKMG + DA +
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 329 EMIHKGLLPNEYTYNSMIHGY-----------------------------------CRID 353
MI KG P+ +T+N +IHGY C+
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 354 NLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYN 413
E+ +K M++KG T+N L+ LC + + DEA L EEM K + D +T+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 414 TLIQGYCKEGKI 425
TLI G+CK G +
Sbjct: 571 TLIDGFCKNGDL 582
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 9/303 (2%)
Query: 131 STGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTD 190
++G S ++ ++ LC+ G ++E K+ + GV ++ T+N + G + D
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 191 LVWKLYHDLIESG---------YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLI 241
++ LIE G LI C + K E L +++ +GL P++ +N LI
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 242 SRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYV 301
+ +C+ ++ V PD FTY +I+GLC + A +FN+ +G
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 302 PDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRL 361
P+ ++Y T+I GL G + +A ++ EM KGL+P T+N +++G C++ + +A L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 362 HKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
K M+ KGY T+N LI G + + A + + M G+ DV TYN+L+ G CK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 422 EGK 424
K
Sbjct: 509 TSK 511
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 164/365 (44%), Gaps = 17/365 (4%)
Query: 68 FNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMD 127
F +N F + L Q+ + ++R L G PD+++ N L L + F+ A
Sbjct: 252 FTYN---LFIQGLCQRGELDGAVRMVGCLIEQ-GPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 128 FLD---STGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCI 184
+L + G P+ + I C+ G+++ A G T+ S + G
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 185 KIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENT 235
T+ L+++ + G LI+ N G + E +L ++ E GL+PE
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 236 AFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDL 295
FN L++ C+ L+ M+++ PD FT+ +I+G K A + + +
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 296 KERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNL 355
+ G PD Y ++++GLCK D + + M+ KG PN +T+N ++ CR L
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 356 EEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQK-GIFRDVITYNT 414
+EA L +EM +K VT+ TLI G C +G D AY LF +M + + TYN
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 415 LIQGY 419
+I +
Sbjct: 608 IIHAF 612
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 152/338 (44%), Gaps = 13/338 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
GF PD + L D L A+ + G PN I+ L G+I EA
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
+++ E G+ ++T+N + G K+ L +I GY LI
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
+ K+ E+L +L++G+ P+ +N L++ C+ F V E TMV + AP+
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FT+ ++ LC+ RK EA + ++K + PD V + T+I G CK G L A ++
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 329 EMIHK-GLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
+M + + TYN +IH + N+ A++L +EM+D+ G TY ++ G C
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
G + Y EM + G + T +I C E ++
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 126/265 (47%), Gaps = 10/265 (3%)
Query: 162 SKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL--IQAFCNDGKVSEGY 219
S ++++G +G + L+ D+ + + ++E Y+ ++ + GKV E
Sbjct: 45 SVIEKLGYYGKFEAMEEVLV--------DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAV 96
Query: 220 ELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGL 279
+ ++ P ++N ++S + F + ++ M R PD +++ +
Sbjct: 97 NVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSF 156
Query: 280 CKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNE 339
CK+ + A R+ N++ +G + V Y TV+ G + + + +++ +M+ G+
Sbjct: 157 CKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCL 216
Query: 340 YTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEE 399
T+N ++ C+ +++E ++L +++ +G TYN I GLC G D A +
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 400 MAQKGIFRDVITYNTLIQGYCKEGK 424
+ ++G DVITYN LI G CK K
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSK 301
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 4/180 (2%)
Query: 250 FGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKR----LEAYRVFNDLKERGYVPDTV 305
+G+ + +V N E V G K+ R EA VF + P
Sbjct: 53 YGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVF 112
Query: 306 MYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEM 365
Y ++ L G+ A K++ M +G+ P+ Y++ + +C+ A RL M
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 366 LDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+G V Y T++ G E Y LF +M G+ + T+N L++ CK+G +
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 12/337 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD+V+ N L + A+ +D G+ P+ + I L EA
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL----IESGYLI-----QA 208
++ + G + T+ + + G K TDL L + + IE+ +I +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C + L ++ G+ P ++ LIS C + S LL M+ R P+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
T+ +I+ K K ++A +++ ++ +R P+ Y+++I+G C + LG+A++M
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
MI K LPN TYN++I+G+C+ +++ L +EM +G TVTY TLI G
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
D A +F++M G+ +++TYN L+ G CK GK+
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 12/336 (3%)
Query: 101 GFSPDLVSCNVLFDSLV---EARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD V+ L L +A +D + G P+ + + LC+ G + A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
+K++ + ++ +++ + K D L+ ++ G LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
CN G+ S+ LL ++E + P F+ LI F +K + +L M+ R+ P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +ING C + EA ++ + + +P+ V Y T+I+G CK + +++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM +GL+ N TY ++IHG+ + + + A+ + K+M+ G +TYN L+ GLC +G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
+ +A +FE + + + D+ TYN +I+G CK GK
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 9/282 (3%)
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWK---------LYHDLIESGY 204
+++A F + + F SI ++ L K+++ DLV + H+L
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
LI FC ++S LL ++++ G P+ N L++ FC L+ MV
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
PD T+ +I+GL K EA + + + +RG PD V Y V++GLCK G A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
+ +M + N Y+++I C+ + ++A L EM +KG +TY++LI+ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
C +GR +A L +M ++ I +++T++ LI + K+GK+V
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 171/349 (48%), Gaps = 15/349 (4%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFL----DSTGFSPNPNSLELY 144
S+R F + +G + S N L + L++ + F + +S G +PN + L
Sbjct: 139 SMRIFLRI-PDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197
Query: 145 IQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY 204
++ LC+ IE A+ ++ MG+ ++ T+ + L G + + ++ ++++ G+
Sbjct: 198 VKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGW 257
Query: 205 ---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSE 255
L+ +C G+ SE ++ + ++ + P + +I C++K G
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 256 LLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLC 315
+ M+ R+ PD+ +VI+ LC+ K EA ++ + + +PD + +T+IH LC
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 316 KMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTV 375
K G + +ARK+ F+ KG +P+ TYN++I G C L EA RL +M ++
Sbjct: 378 KEGRVTEARKL-FDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 376 TYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
TYN LI GL +G E + EEM + G F + T+ L +G K GK
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 17/370 (4%)
Query: 73 PLFFREFLKQQNNVLLSIRFFQWL-HSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDS 131
P + QQ N+ L+++ F + SH GF+ + + + + L ARAF +
Sbjct: 49 PKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMAD 108
Query: 132 --TGFSPNPNSLELYIQCLCESGLI---EEAFCAFSKLKEMGVFGSIKTWNSALLGCIKI 186
+ P L+I L GL E + F ++ + GV S+++ N+ L I+
Sbjct: 109 LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 168
Query: 187 DRTDLVWKLYHDLIES----------GYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTA 236
R DLV ++ + ES L++A C + Y++L ++ GLVP
Sbjct: 169 QRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 237 FNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLK 296
+ ++ + + + +L M+ R PD TY +++G CK + EA V +D++
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 297 ERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLE 356
+ P+ V Y +I LCK G+AR M+ EM+ + +P+ +I C ++
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 357 EAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
EA L ++ML +TLI LC GR EA LF+E +KG ++TYNTLI
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLI 407
Query: 417 QGYCKEGKIV 426
G C++G++
Sbjct: 408 AGMCEKGELT 417
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 20/339 (5%)
Query: 85 NVLLSIRFFQWLHS-------HYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGF 134
NVL+ + F +H+ +G +P++ +CN+L +L + + A LD S G
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 135 SPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWK 194
PN + + G +E A ++ + G + T+ + G K+ R
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 195 LYHDL---------IESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFC 245
+ D+ + G +I+A C + K E + ++LE +P+++ K+I C
Sbjct: 283 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC 342
Query: 246 EKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTV 305
E L M+ N PDN +I+ LCK + EA ++F++ E+G +P +
Sbjct: 343 EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLL 401
Query: 306 MYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEM 365
Y T+I G+C+ G L +A ++W +M + PN +TYN +I G + N++E R+ +EM
Sbjct: 402 TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Query: 366 LDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKG 404
L+ G T+ L GL G+ ++A + G
Sbjct: 462 LEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 102/251 (40%), Gaps = 13/251 (5%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVA---MDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G+ PD + VL D + F A MD ++ PN + + I+ LC+ EA
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIES---------GYLIQA 208
F ++ E + + + D L+ ++++ LI
Sbjct: 316 RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 375
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
C +G+V+E +L + E G +P +N LI+ CEK L M R P+
Sbjct: 376 LCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
FTY +I GL K+ E RV ++ E G P+ + + GL K+G DA K+
Sbjct: 435 AFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
Query: 329 EMIHKGLLPNE 339
+ G + E
Sbjct: 495 MAVMNGKVDKE 505
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 11/301 (3%)
Query: 131 STGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTD 190
++G PN I+ ++ +A ++KE G+ I +NS ++G K R D
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 191 LVWKLYHDLIESGYLIQAFCNDGKVSEGY----------ELLRQVLEDGLVPENTAFNKL 240
+++E+G AF +S GY + ++++ E G++P L
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFIS-GYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 241 ISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGY 300
I+ +C+K +MV + D TY ++NGL K+ K +A +F +++ +G
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 301 VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKR 360
PD Y +I+G K+G + A ++ EM+ +GL PN YN ++ G+CR +E+AK
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 361 LHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
L EM KG VTY T+I G C G EA+ LF+EM KG+ D Y TL+ G C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 421 K 421
+
Sbjct: 744 R 744
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 160/373 (42%), Gaps = 50/373 (13%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G P+ + +EA F A ++ G PN I C+ G + EA
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQA 208
A+ + + G+ G KT+ + G K D+ D +++ D+ G LI
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
F G + + + +++E+GL P +N L+ FC + ELL M + P+
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM-- 326
TY +I+G CKS EA+R+F+++K +G VPD+ +YTT++ G C++ + A +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 327 ------------------WFEMIHKGLL------------------PNEYTYNSMIHGYC 350
W K L PN+ TYN MI C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 351 RIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVI 410
+ NLE AK L +M + T +TY +L+ G GR E + +F+E GI D I
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 411 TYNTLIQGYCKEG 423
Y+ +I + KEG
Sbjct: 877 MYSVIINAFLKEG 889
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 186/437 (42%), Gaps = 54/437 (12%)
Query: 40 YTEIAKQVCKITRTKPRWEQTLLSDIPSF-----NFNDPLFFREFLKQQNNVLLSIRFFQ 94
Y + +CKI R + ++LL ++ S N L LK +N +
Sbjct: 280 YDVLIDGLCKIKRLED--AKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 95 WLHSHYGFSPDLVSCN--VLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESG 152
+ P + C V+ V +A K D + ++G P + I+ C
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKA-KALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 153 LIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG--------- 203
+ + + ++K+ + S T+ + + G D + + ++I SG
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 204 YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVAR 263
LI+ F + + + +L+++ E G+ P+ +N LI + K L MV
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 264 NRAPDNFTYEEVINGL-----------------------------------CKSRKRLEA 288
P+ FTY I+G CK K +EA
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 289 YRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHG 348
+ + ++G + D YT +++GL K + DA +++ EM KG+ P+ ++Y +I+G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 349 YCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRD 408
+ ++ N+++A + EM+++G + YN L+ G C G ++A L +EM+ KG+ +
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 409 VITYNTLIQGYCKEGKI 425
+TY T+I GYCK G +
Sbjct: 697 AVTYCTIIDGYCKSGDL 713
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 9/303 (2%)
Query: 133 GFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLV 192
G P + ++ I LC+ +E+A ++ +GV T++ + G +K D
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 193 WKLYHDLIESGYLIQAFCND---------GKVSEGYELLRQVLEDGLVPENTAFNKLISR 243
L H+++ G I+ + D G + + L ++ GL+P+ A+ LI
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 244 FCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPD 303
+C +KN + ELL M RN +TY V+ G+C S AY + ++ G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 304 TVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHK 363
V+YTT+I + GDA ++ EM +G+ P+ + YNS+I G + ++EA+
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 364 EMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEG 423
EM++ G TY I+G A +EM + G+ + + LI YCK+G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 424 KIV 426
K++
Sbjct: 572 KVI 574
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 13/336 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G P++V L + ++ F AM L G +P+ I L ++ ++EA
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL---------IQA 208
++ E G+ + T+ + + G I+ K ++ E G L I
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
+C GKV E R +++ G++ + + L++ + E+ M + APD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
F+Y +ING K +A +F+++ E G P+ ++Y ++ G C+ G + A+++
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM KGL PN TY ++I GYC+ +L EA RL EM KG + Y TL+ G C
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
+ A +F +KG +N LI K GK
Sbjct: 747 DVERAITIFGT-NKKGCASSTAPFNALINWVFKFGK 781
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 30/303 (9%)
Query: 152 GLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY------- 204
G IEEA FS + + + L ++ +R DL W +Y ++E
Sbjct: 165 GYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224
Query: 205 --LIQAFCNDGKVSEGYELL---------------------RQVLEDGLVPENTAFNKLI 241
LI A C G V G ++L ++ GLVP ++ LI
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLI 284
Query: 242 SRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYV 301
C+ K LL M + + DN TY +I+GL K R A + +++ G
Sbjct: 285 DGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344
Query: 302 PDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRL 361
MY I + K G + A+ ++ MI GL+P Y S+I GYCR N+ + L
Sbjct: 345 IKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 362 HKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
EM + + TY T++ G+C G D AY++ +EM G +V+ Y TLI+ + +
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 422 EGK 424
+
Sbjct: 465 NSR 467
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 20/306 (6%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G +P+++ N+L + + A + LD G PN + I C+SG + EA
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLY--------HDLIESGYLIQAF 209
F F ++K G+ + + + GC +++ + ++ LI
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWV 776
Query: 210 CNDGKVSEGYELLRQVLEDGL----VPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
GK E+L ++++ P + +N +I C++ N EL H M N
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 266 APDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARK 325
P TY ++NG K +R E + VF++ G PD +MY+ +I+ K G A
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 326 MWFEMIHKGLLPNE-----YTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTL 380
+ +M K + + T +++ G+ ++ +E A+++ + M+ Y + T L
Sbjct: 897 LVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956
Query: 381 IAGLCL 386
I C+
Sbjct: 957 INESCI 962
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 122/301 (40%), Gaps = 32/301 (10%)
Query: 148 LCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIK--IDRTDLVWKLYHDLIESGYL 205
LC G E+A ++ E + + W S+++ C + + ++D D + G L
Sbjct: 107 LCNFGSFEKALSVVERMIERN-WPVAEVW-SSIVRCSQEFVGKSD-------DGVLFGIL 157
Query: 206 IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNR 265
+ G + E + + LVP + L+ ++ MV RN
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 266 APDNFTYEEVINGLC-------------KSRKRLEAYRVFND----LKE----RGYVPDT 304
D TY +I C K+ K + D LKE +G VP
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 305 VMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKE 364
Y +I GLCK+ L DA+ + EM G+ + +TY+ +I G + N + AK L E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 365 MLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
M+ G Y+ I + G ++A LF+ M G+ Y +LI+GYC+E
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 425 I 425
+
Sbjct: 398 V 398
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 136 PNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL 195
PN + + I LC+ G +E A F +++ + ++ T+ S L G K+ R ++ +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 196 YHDLIESG---------YLIQAFCNDGKVSEGYELLRQV-----LEDGLVPENTAFNKLI 241
+ + I +G +I AF +G ++ L+ Q+ ++DG + L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 242 SRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLC-KSRKRLEAYRV 291
S F + +++ MV PD+ T E+IN C S +R+EA V
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 168/388 (43%), Gaps = 51/388 (13%)
Query: 89 SIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD-------STGFSPNPNSL 141
++ F + + + S N + + ++ + ++F D + SPN S
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190
Query: 142 ELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIE 201
L I+ LC+ ++ A F + E T+ + + G K +R D L ++
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 202 SG---------YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGR 252
G LI C G ++ +L+ + G VP +N LI C K +
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 253 VSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGY------------ 300
LL MV+ P++ TY +INGL K R+ +A R+ + ++ERGY
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 301 -----------------------VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLP 337
P+ V+Y+ ++ GLC+ G +A+++ MI G LP
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 338 NEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLF 397
N YTY+S++ G+ + EEA ++ KEM G Y+ LI GLC GR EA ++
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 398 EEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+M GI D + Y+++I+G C G +
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 150/331 (45%), Gaps = 15/331 (4%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
G SP V NVL D L + +D+ G PN + I LC G +++A
Sbjct: 252 GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQA 208
++ + T+ + + G +K R +L + E GY LI
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
+GK E L R++ E G P ++ L+ C + E+L+ M+A P+
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
+TY ++ G K+ EA +V+ ++ + G + Y+ +I GLC +G + +A +W
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEML---DKGYGETTVTYNTLIAGLC 385
+M+ G+ P+ Y+S+I G C I +++ A +L+ EML + VTYN L+ GLC
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 386 LHGRTDEAYHLFEEMAQKGIFRDVITYNTLI 416
+ A L M +G DVIT NT +
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 120/299 (40%), Gaps = 29/299 (9%)
Query: 110 NVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKE 166
+VL L + + AM + G PN + + LC G EA +++
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 167 MGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQAFCNDGKVSE 217
G + T++S + G K + +++ ++ ++G LI C G+V E
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA---PDNFTYEE 274
+ ++L G+ P+ A++ +I C + +L H M+ + PD TY
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 275 VINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKG 334
+++GLC + A + N + +RG PD + T ++ L + D + + E +
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Query: 335 LLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEA 393
LL + + G C I + ML K T T+ ++ +C + + A
Sbjct: 606 LLKRQR-----VSGACTIVEV---------MLGKYLAPKTSTWAMIVREICKPKKINAA 650
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 160/335 (47%), Gaps = 12/335 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVA---MDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
PD+ + N+L + L +F+ + M ++ +G++P + + C+ G + A
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDL---------IESGYLIQAFCN 211
+K GV + T+N + + +R + L D+ + LI F N
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+GKV +LL ++L GL P + FN LI + NF ++ + M A+ P +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +++GLCK+ + A + +K G + YT +I GLCK G+L +A + EM
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
G+ P+ TY+++I+G+C++ + AK + + G + Y+TLI C G
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
EA ++E M +G RD T+N L+ CK GK+
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 13/357 (3%)
Query: 82 QQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNP 138
+ VL++ + + S +G SP+ V+ N L D + FK A+ +++ G +P+
Sbjct: 310 NEGKVLIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368
Query: 139 NSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHD 198
S + + LC++ + A + ++K GV T+ + G K D L ++
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 199 LIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKN 249
+ + G LI FC G+ E++ ++ GL P ++ LI C
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488
Query: 250 FGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTT 309
+ M+ D+FT+ ++ LCK+ K EA + G +P+TV +
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 310 VIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKG 369
+I+G G A ++ EM G P +TY S++ G C+ +L EA++ K +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 370 YGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
TV YNTL+ +C G +A LF EM Q+ I D TY +LI G C++GK V
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 167/369 (45%), Gaps = 36/369 (9%)
Query: 88 LSIRFFQWLHSHYGFSPDLVSCNVLFDS--LVEARAFKVAMDFLDSTGF----------- 134
L+++F +W+ G D + V + LV AR + A L
Sbjct: 52 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 111
Query: 135 --------SPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFG---SIKTWNSALLGC 183
+ NP+ ++ I+ G+I+++ F + MG++G S+ T N+ L
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIF---RLMGLYGFNPSVYTCNAILGSV 168
Query: 184 IKIDRTDLVW---------KLYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPEN 234
+K VW K+ D+ LI C +G + L++++ + G P
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228
Query: 235 TAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFND 294
+N ++ +C+K F ELL M ++ D TY +I+ LC+S + + Y + D
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 295 LKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDN 354
+++R P+ V Y T+I+G G + A ++ EM+ GL PN T+N++I G+ N
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 355 LEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNT 414
+EA ++ M KG + V+Y L+ GLC + D A + M + G+ ITY
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 415 LIQGYCKEG 423
+I G CK G
Sbjct: 409 MIDGLCKNG 417
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 12/339 (3%)
Query: 92 FFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTG---FSPNPNSLELYIQCL 148
+F+ + G +PD+V+ N + D + D L G PN + + +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 149 CESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---- 204
+ + +F + + G+ T +S +LG + + ++ K+ I G
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824
Query: 205 -----LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHT 259
LI C +G+++ ++L++ + G+ + + ++S F +LH
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 884
Query: 260 MVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGW 319
M + +P++ Y +INGLC+ A+ V ++ P V + ++ L K G
Sbjct: 885 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 944
Query: 320 LGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNT 379
+A + M+ L+P ++ +++H C+ N+ EA L M + G V+YN
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 380 LIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQG 418
LI GLC G A+ L+EEM G + TY LI+G
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 158/359 (44%), Gaps = 12/359 (3%)
Query: 80 LKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSP 136
L ++ +++I F + + P+ V D + +A +K + F +D+ G +P
Sbjct: 658 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717
Query: 137 NPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLY 196
+ + I G IE+ ++ ++ T+N L G K + LY
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 197 HDLIESGYL---------IQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEK 247
+I +G L + C + G ++L+ + G+ + FN LIS+ C
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 248 KNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMY 307
+L+ M + + D T + +++ L ++ + E+ V +++ ++G P++ Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 308 TTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLD 367
+I+GLC++G + A + EMI + P ++M+ + +EA L + ML
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 368 KGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
T ++ TL+ C +G EA L M+ G+ D+++YN LI G C +G +
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%)
Query: 267 PDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM 326
P +T ++ + KS + + + ++ +R PD + +I+ LC G + +
Sbjct: 156 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 215
Query: 327 WFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCL 386
+M G P TYN+++H YC+ + A L M KG TYN LI LC
Sbjct: 216 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 387 HGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
R + Y L +M ++ I + +TYNTLI G+ EGK++
Sbjct: 276 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 136/338 (40%), Gaps = 13/338 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTGFSPNPNSLELY---IQCLCESGLIEEA 157
G P + L L + + A FL S P +Y + +C+SG + +A
Sbjct: 573 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 632
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL----------IQ 207
F ++ + + T+ S + G + +T + + G + +
Sbjct: 633 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 692
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
G+ G Q+ G P+ N +I + + ++LL M +N P
Sbjct: 693 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 752
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
+ TY +++G K + ++ ++ + G +PD + +++ G+C+ L K+
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
I +G+ + YT+N +I C + A L K M G T + +++ L +
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
R E+ + EM+++GI + Y LI G C+ G I
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 910
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 163/365 (44%), Gaps = 32/365 (8%)
Query: 66 PSFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVA 125
P P ++ + Q++ LL+ F + F S +L L R F +
Sbjct: 44 PKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLI 103
Query: 126 MDFLDSTGFSPNPNSLELY---IQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLG 182
D L S P + E++ I+ E+ L E+ F K+ E K N L
Sbjct: 104 DDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL-- 161
Query: 183 CIKIDRTDLVWKLYHDLIES--GYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKL 240
D++ S GYL +AF EL + G++P ++N L
Sbjct: 162 ---------------DVLVSHRGYLQKAF----------ELFKSSRLHGVMPNTRSYNLL 196
Query: 241 ISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGY 300
+ FC + +L M+ R+ PD +Y+ +I G C+ + A + +D+ +G+
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF 256
Query: 301 VPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKR 360
VPD + YTT+++ LC+ L +A K+ M KG P+ YN+MI G+CR D +A++
Sbjct: 257 VPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARK 316
Query: 361 LHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYC 420
+ +ML G +V+Y TLI GLC G DE EEM KG N L++G+C
Sbjct: 317 VLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 376
Query: 421 KEGKI 425
GK+
Sbjct: 377 SFGKV 381
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 10/286 (3%)
Query: 134 FSPNPNSLELYIQCLCE-SGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLV 192
F+P P L + L G +++AF F + GV + +++N + D +
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 193 WKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISR 243
++L+ ++E LIQ FC G+V+ ELL +L G VP+ ++ L++
Sbjct: 210 YQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNS 269
Query: 244 FCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPD 303
C K +LL M + PD Y +I G C+ + ++A +V +D+ G P+
Sbjct: 270 LCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPN 329
Query: 304 TVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHK 363
+V Y T+I GLC G + +K EMI KG P+ N ++ G+C +EEA + +
Sbjct: 330 SVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVE 389
Query: 364 EMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDV 409
++ G + T+ +I +C +++ E+ ++ I D
Sbjct: 390 VVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 435
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 237 FNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLE-AYRVFNDL 295
F LI + E K +V + M+ N P +++ L R L+ A+ +F
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 296 KERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNL 355
+ G +P+T Y ++ C L A +++ +M+ + ++P+ +Y +I G+CR +
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 356 EEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTL 415
A L +ML+KG+ ++Y TL+ LC + EAY L M KG D++ YNT+
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 416 IQGYCKEGKIVN 427
I G+C+E + ++
Sbjct: 302 ILGFCREDRAMD 313
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 162/337 (48%), Gaps = 14/337 (4%)
Query: 102 FSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEAF 158
PD+V+ L L + + F++ ++ +D FSP+ ++ ++ L + G IEEA
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 159 CAFSKLKEMGVFGSIKTWNSALLGCIK----------IDRTDLVWKLYHDLIESGYLIQA 208
++ + GV ++ +N+ + K DR + +D+ S LI
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS-ILIDM 411
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPD 268
FC GK+ L ++++ GL +N LI+ C+ + + M+ + P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 269 NFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWF 328
TY ++ G C K +A R+++++ +G P +TT++ GL + G + DA K++
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 329 EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHG 388
EM + PN TYN MI GYC ++ +A KEM +KG T +Y LI GLCL G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 389 RTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ EA + + + + I Y L+ G+C+EGK+
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 51/374 (13%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDSTG---FSPNPNSLELYIQCLCESGLIEEA 157
G +P + + L L A + A+ + PN + + I+ CE G + +A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLG-CIKIDRTDLVWKLYHDLIESGY----------LI 206
F ++ E G+ ++ + G C+ ++ K++ D + G L+
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE--AKVFVDGLHKGNCELNEICYTGLL 619
Query: 207 QAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRA 266
FC +GK+ E + +++++ G+ + + LI + K+ LL M R
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 267 PDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKM 326
PD+ Y +I+ K+ EA+ +++ + G VP+ V YT VI+GLCK G++ +A +
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 327 WFEM-----------------------------------IHKGLLPNEYTYNSMIHGYCR 351
+M I KGLL N TYN +I G+CR
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCR 799
Query: 352 IDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVIT 411
+EEA L M+ G +TY T+I LC +A L+ M +KGI D +
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Query: 412 YNTLIQGYCKEGKI 425
YNTLI G C G++
Sbjct: 860 YNTLIHGCCVAGEM 873
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 190/454 (41%), Gaps = 33/454 (7%)
Query: 3 RAPFSVLTILRQNPRN-FQNPNTQLRNLSIETKESQQLYTEIAKQVCKITRTKPRWEQTL 61
+ P ++ +I + RN F+N ++ + + E + ++ + V +I R K WE L
Sbjct: 2 KLPCTIRSITSSHFRNSFRNVSSVIDSAQEECRIAED--KQFVDAVKRIVRGKRSWEIAL 59
Query: 62 LSDIPSFNFNDPLFFREFLKQQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARA 121
S++ S + ++ L +RFF +L H GF S +L +LV+A
Sbjct: 60 SSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANL 119
Query: 122 FKVAMDFLDSTGFSPNPNS--------------------LELYIQCLCESGLIEEAFCAF 161
F A L + S +L IQ S + + F
Sbjct: 120 FWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVF 179
Query: 162 SKL-KEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
+ ++ + ++T ++ L G +K L +L++D++ G +I++ C
Sbjct: 180 KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCE 239
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+S E++ + G +N LI C+K+ + + ++ PD T
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y ++ GLCK ++ + +++ + P ++++ GL K G + +A + ++
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
G+ PN + YN++I C+ EA+ L M G VTY+ LI C G+ D
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
A EM G+ V YN+LI G+CK G I
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 158/372 (42%), Gaps = 49/372 (13%)
Query: 100 YGFSPDLVSCNVLFDSLVEARAFKVA---MDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
+G SP+L N L DSL + R F A D + G PN + + I C G ++
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 157 AFCAFSKLKEMGV----------------FGSIK-------------------TWNSALL 181
A ++ + G+ FG I T+ S +
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 182 GCIKIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVP 232
G + + +LYH++ G L+ G + + +L ++ E + P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 233 ENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVF 292
+N +I +CE+ + + E L M + PD ++Y +I+GLC + + EA +VF
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVF 599
Query: 293 NDLKERGYVP-DTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCR 351
D +G + + YT ++HG C+ G L +A + EM+ +G+ + Y +I G +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 352 IDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVIT 411
+ + L KEM D+G V Y ++I G EA+ +++ M +G + +T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 412 YNTLIQGYCKEG 423
Y +I G CK G
Sbjct: 720 YTAVINGLCKAG 731
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 30/326 (9%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P +V + L ++ + F + + + + G S N + ++I C + A
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYE 220
K+ ++G SI T NS L+ FC+ ++SE
Sbjct: 133 LGKMMKLGYGPSIVTLNS--------------------------LLNGFCHGNRISEAVA 166
Query: 221 LLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLC 280
L+ Q++E G P+ F L+ + L+ MV + PD TY VINGLC
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 281 KSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEY 340
K + A + N +++ D V+Y T+I GLCK + DA ++ +M KG+ P+ +
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 341 TYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEM 400
TYN +I C +A RL +ML+K V +N LI G+ EA L++EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 401 AQ-KGIFRDVITYNTLIQGYCKEGKI 425
+ K F DV+ YNTLI+G+CK ++
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRV 372
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 14/334 (4%)
Query: 105 DLVSCNVLFDSLVEARAFKVAMDF---LDSTGFSPNPNSLELYIQCLCESGLIEEAFCAF 161
D+V N + D L + + A D +++ G P+ + I CLC G +A
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 162 SKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY----------LIQAFCN 211
S + E + + +N+ + +K + KLY ++++S + LI+ FC
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+V EG E+ R++ + GLV + LI F + ++ + MV+ PD T
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +++GLC + A VF +++R D V YTT+I LCK G + D ++ +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
KG+ PN TY +M+ G+CR EEA L EM + G + TYNTLI G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ L +EM G D T+ L+ +G++
Sbjct: 549 ASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRL 581
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 9/282 (3%)
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKL---------YHDLIESGY 204
+++A F + + F SI ++ L K+++ DLV L H+L
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
I FC ++S +L ++++ G P N L++ FC L+ MV
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
PD T+ +++GL + K EA + + +G PD V Y VI+GLCK G A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
+ +M + + YN++I G C+ ++++A L +M KG TYN LI+ L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIV 426
C +GR +A L +M +K I D++ +N LI + KEGK+V
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%)
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
D K+ + L +++ P F+KL+S + F V L M + + +T
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y IN C+ + A + + + GY P V ++++G C + +A + +M+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
G P+ T+ +++HG + + EA L + M+ KG VTY +I GLC G D
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
A +L +M + I DV+ YNT+I G CK
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 29/186 (15%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAM---DFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G PD+++ N+L D L + A+ +++ + + I+ LC++G +E+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSE 217
+ F L GV ++ T+ + + G FC G E
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSG--------------------------FCRKGLKEE 514
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVIN 277
L ++ EDG +P + +N LI + +EL+ M + A D T+ V N
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Query: 278 GLCKSR 283
L R
Sbjct: 575 MLHDGR 580
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 151/315 (47%), Gaps = 11/315 (3%)
Query: 121 AFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSAL 180
A + MD + + G +P+ ++ ++ E GLIE A F ++ GV ++ +
Sbjct: 166 AVGMVMD-MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMV 224
Query: 181 LGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCNDGKVSEGYELLRQVLEDGLV 231
+GC + + + +I+ G+ ++ A C +G V+ R++++ G
Sbjct: 225 IGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFK 284
Query: 232 PENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRV 291
P F LI C+K + + E+L MV P+ +T+ +I+GLCK +A+R+
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 292 FNDL-KERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYC 350
F L + Y P+ YT++I G CK L A ++ M +GL PN TY ++I+G+C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 351 RIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVI 410
+ + A L M D+G+ TYN I LC R EAY L + G+ D +
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 411 TYNTLIQGYCKEGKI 425
TY LIQ CK+ I
Sbjct: 465 TYTILIQEQCKQNDI 479
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 156/348 (44%), Gaps = 17/348 (4%)
Query: 94 QWLHS--HYGFSPDLVSCNVLFDSLVEA----RAFKVAMDFLDSTGFSPNPNSLELYIQC 147
+WL GF PD +C ++ +L E RA +D GF PN + I
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID-LGFKPNLINFTSLIDG 296
Query: 148 LCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY--- 204
LC+ G I++AF ++ G ++ T + + G K T+ ++L+ L+ S
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356
Query: 205 -------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELL 257
+I +C + K++ L ++ E GL P + LI+ C+ +FGR EL+
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Query: 258 HTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKM 317
+ M P+ +TY I+ LCK + EAY + N G D V YT +I CK
Sbjct: 417 NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 476
Query: 318 GWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTY 377
+ A + M G + N +I +CR ++E++RL + ++ G T TY
Sbjct: 477 NDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY 536
Query: 378 NTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
++I+ C G D A F M + G D TY +LI G CK+ +
Sbjct: 537 TSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 152/340 (44%), Gaps = 13/340 (3%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDS---TGFSPNPNSLELYIQCLCESGLIEEA 157
GF P+L++ L D L + + K A + L+ G+ PN + I LC+ G E+A
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 341
Query: 158 FCAFSKLKEMGVFG-SIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQ 207
F F KL + ++ T+ S + G K D+ + L+ + E G LI
Sbjct: 342 FRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
C G YEL+ + ++G +P +N I C+K ELL+ +
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D TY +I CK +A F + + G+ D + +I C+ + ++ +++
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
++ GL+P + TY SMI YC+ +++ A + M G + TY +LI+GLC
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
DEA L+E M +G+ +T TL YCK N
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSAN 621
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 153/338 (45%), Gaps = 16/338 (4%)
Query: 101 GFSPDLVSCNVLFDSLVE----ARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEE 156
G+ P++ + L D L + +AF++ + + S + PN ++ I C+ +
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 157 AFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYL---------IQ 207
A FS++KE G+F ++ T+ + + G K ++L + + + G++ I
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 208 AFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAP 267
+ C + E YELL + GL + + LI C++ + + M
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 268 DNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMW 327
D +I C+ +K E+ R+F + G +P YT++I CK G + A K +
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Query: 328 FEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLH 387
M G +P+ +TY S+I G C+ ++EA +L++ M+D+G VT TL C
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Query: 388 GRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ A L E + +K R T TL++ C E K+
Sbjct: 617 NDSANAMILLEPLDKKLWIR---TVRTLVRKLCSEKKV 651
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 116/224 (51%), Gaps = 5/224 (2%)
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
+++ F G+++E ++ + GL P + N ++ E + M R
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
PD+ +Y+ ++ G + K EA R + +RG++PD T ++ LC+ G + R
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN--R 270
Query: 325 KMWF--EMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIA 382
+W+ +MI G PN + S+I G C+ ++++A + +EM+ G+ T+ LI
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 383 GLCLHGRTDEAYHLFEEMAQKGIFR-DVITYNTLIQGYCKEGKI 425
GLC G T++A+ LF ++ + ++ +V TY ++I GYCKE K+
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKL 374
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 158/327 (48%), Gaps = 12/327 (3%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEAFCA 160
P +++ +L ++ + A+ +D S G P+ + I+ +C+ G+++ AF
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 161 FSKLKEMGVFGSIKTWN---SALLGCIKIDRTD-LVWKLYHD-----LIESGYLIQAFCN 211
L+ G + ++N ALL K + + L+ K++ + ++ LI C
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
DGK+ E LL+ + E GL P+ +++ LI+ FC + E L TM++ PD
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y V+ LCK+ K +A +F L E G P++ Y T+ L G A M EM+
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
G+ P+E TYNSMI CR ++EA L +M + + VTYN ++ G C R +
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQG 418
+A ++ E M G + TY LI+G
Sbjct: 526 DAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 150/336 (44%), Gaps = 12/336 (3%)
Query: 102 FSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEAF 158
FSPD V+ N++ SL +A+ L+ S P + + I+ G ++EA
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 159 CAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH---------DLIESGYLIQAF 209
++ G+ + T+N+ + G K D +++ D+I L++A
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 210 CNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDN 269
N GK EG +L+ ++ + P ++ LI+ C LL M + PD
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 270 FTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFE 329
++Y+ +I C+ + A + G +PD V Y TV+ LCK G A +++ +
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 330 MIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGR 389
+ G PN +YN+M + A + EM+ G +TYN++I+ LC G
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 390 TDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
DEA+ L +M V+TYN ++ G+CK +I
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 33/363 (9%)
Query: 67 SFNFNDPLFFREFLK--QQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKV 124
S F D + F + + N + S+ + + G++PD++ C L R
Sbjct: 84 SLGFRDTQMLKIFHRSCRSGNYIESLHLLETM-VRKGYNPDVILCTKLIKGFFTLRNIPK 142
Query: 125 A---MDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALL 181
A M+ L+ G P+ + I C+ I++A +++ T+N
Sbjct: 143 AVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN---- 197
Query: 182 GCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLI 241
+I + C+ GK+ ++L Q+L D P + LI
Sbjct: 198 ----------------------IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 242 SRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYV 301
+ +L+ M++R PD FTY +I G+CK A+ + +L+ +G
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Query: 302 PDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRL 361
PD + Y ++ L G + K+ +M + PN TY+ +I CR +EEA L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 362 HKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCK 421
K M +KG +Y+ LIA C GR D A E M G D++ YNT++ CK
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 422 EGK 424
GK
Sbjct: 416 NGK 418
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 14/353 (3%)
Query: 85 NVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSL 141
N+ ++R + L +G PD+ + N L + + A LD S FSP+ +
Sbjct: 139 NIPKAVRVMEILE-KFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 142 ELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIE 201
+ I LC G ++ A ++L ++ T+ + + D KL +++
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 202 SGY---------LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGR 252
G +I+ C +G V +E++R + G P+ ++N L+ + +
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 253 VSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIH 312
+L+ M + P+ TY +I LC+ K EA + +KE+G PD Y +I
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 313 GLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGE 372
C+ G L A + MI G LP+ YN+++ C+ ++A + ++ + G
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 373 TTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ +YNT+ + L G A H+ EM GI D ITYN++I C+EG +
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 98/203 (48%), Gaps = 1/203 (0%)
Query: 223 RQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVINGLCKS 282
RQ L +T K+ R C N+ LL TMV + PD ++I G
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 283 RKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTY 342
R +A RV L++ G PD Y +I+G CKM + DA ++ M K P+ TY
Sbjct: 138 RNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 343 NSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQ 402
N MI C L+ A ++ ++L T +TY LI L G DEA L +EM
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 403 KGIFRDVITYNTLIQGYCKEGKI 425
+G+ D+ TYNT+I+G CKEG +
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMV 279
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 37/271 (13%)
Query: 191 LVWKLYH-DLIESGYLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKN 249
+V K Y+ D+I LI+ F + + ++ ++LE P+ A+N LI+ FC+
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNR 173
Query: 250 FGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTT 309
+ +L M +++ +PD TY +I LC K A +V N L P + YT
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 310 VIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCR----------IDNL---- 355
+I G + +A K+ EM+ +GL P+ +TYN++I G C+ + NL
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 356 ---------------------EEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAY 394
EE ++L +M + VTY+ LI LC G+ +EA
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 395 HLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+L + M +KG+ D +Y+ LI +C+EG++
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 29/305 (9%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVA---MDFLDSTGFSPNPNSLELYIQCLCESGLIEEA 157
G PD++S N+L +L+ ++ M + S PN + + I LC G IEEA
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGYLIQAFCNDGKVSE 217
+KE G+ +++ LI AFC +G++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDP--------------------------LIAAFCREGRLDV 386
Query: 218 GYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFTYEEVIN 277
E L ++ DG +P+ +N +++ C+ + E+ + +P++ +Y + +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 278 GLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLP 337
L S ++ A + ++ G PD + Y ++I LC+ G + +A ++ +M P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 338 NEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLF 397
+ TYN ++ G+C+ +E+A + + M+ G TY LI G+ G EA L
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 398 EEMAQ 402
++ +
Sbjct: 567 NDLVR 571
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 155/331 (46%), Gaps = 26/331 (7%)
Query: 120 RAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSA 179
+AF V + + GF P+ ++ + LC + +E AF F ++K G+ + T+
Sbjct: 466 KAFSVIREMI-GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 180 LLGCIKIDRTDLVWKLYHDLIESG---------YLIQAFCNDGKVSEGYELLRQVLEDGL 230
+ K + K ++++ E G LI A+ KVS EL +L +G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 231 VPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDN----------------FTYEE 274
+P ++ LI C+ + ++ M PD TY
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 275 VINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMIHKG 334
+++G CKS + EA ++ + + G P+ ++Y +I GLCK+G L +A+++ EM G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 335 LLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTDEAY 394
YTY+S+I Y ++ + A ++ +ML+ V Y +I GLC G+TDEAY
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 395 HLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
L + M +KG +V+TY +I G+ GKI
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 163/379 (43%), Gaps = 70/379 (18%)
Query: 115 SLVEARAFKVAMDFLDSTGFSPNPNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIK 174
SL + ++ A+ +++ F P+ I LCE+ L EEA ++++ ++
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 175 TWNSALLGCI---KIDRTDLVWKLYHDLIESGY--------LIQAFCNDGKVSEGYELLR 223
T+++ L GC+ ++ R V + ++E Y L+ A+C G S Y+LL+
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMM--MMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 224 QVLEDGLVPENTAFNKLISRFCEKKN---------------------------------- 249
++++ G +P +N LI C K+
Sbjct: 397 KMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 250 -------FGRVSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVP 302
+ + ++ M+ + PD TY +V+N LC + K A+ +F ++K G V
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 303 DTVMYTTVIHGLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLH 362
D YT ++ CK G + ARK + EM G PN TY ++IH Y + + A L
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 363 KEMLDKGYGETTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRD-------------- 408
+ ML +G VTY+ LI G C G+ ++A +FE M D
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 409 --VITYNTLIQGYCKEGKI 425
V+TY L+ G+CK ++
Sbjct: 637 PNVVTYGALLDGFCKSHRV 655
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 153/353 (43%), Gaps = 28/353 (7%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEA 157
GF PD + + + + L A ++A + G + + + + C++GLIE+A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG---------YLIQA 208
F++++E+G ++ T+ + + +K + +L+ ++ G LI
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 209 FCNDGKVSEGYELLRQVLEDGLVPEN----------------TAFNKLISRFCEKKNFGR 252
C G+V + ++ ++ VP+ + L+ FC+
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 253 VSELLHTMVARNRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIH 312
+LL M P+ Y+ +I+GLCK K EA V ++ E G+ Y+++I
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 313 GLCKMGWLGDARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGE 372
K+ A K+ +M+ PN Y MI G C++ +EA +L + M +KG
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 373 TTVTYNTLIAGLCLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
VTY +I G + G+ + L E M KG+ + +TY LI CK G +
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 25/331 (7%)
Query: 101 GFSPDLVSCNVLFDSLVEARAFKVAMDFLD---STGFSPNPNSLELYIQCLCESGLIEEA 157
G +P++V+ L + ++A+ A + + S G PN + I C++G +E+A
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 158 FCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHD------LIESGYLIQAFCN 211
F ++ G + D+ +K Y D ++ G L+ FC
Sbjct: 608 CQIFERM----------------CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
+V E +LL + +G P ++ LI C+ E+ M +T
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +I+ K +++ A +V + + E P+ V+YT +I GLCK+G +A K+ M
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGLCLHGRTD 391
KG PN TY +MI G+ I +E L + M KG VTY LI C +G D
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 392 EAYHLFEEMAQKGIFRDVITYNTLIQGYCKE 422
A++L EEM Q Y +I+G+ KE
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 16/336 (4%)
Query: 104 PDLVSCNVLFDSLVEARAFKVAMDFLDST---GFSPNPNSLELYIQCLCESGLIEEAFCA 160
P++V+ L D ++ + A LD+ G PN + I LC+ G ++EA
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 161 FSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY---------LIQAFCN 211
+++ E G ++ T++S + K+ R DL K+ ++E+ +I C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 212 DGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARNRAPDNFT 271
GK E Y+L++ + E G P + +I F ELL M ++ AP+ T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 272 YEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDARKMWFEMI 331
Y +I+ CK+ A+ + ++K+ + T Y VI G K ++ + E+
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 874
Query: 332 HKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEM--LDKGYGETTVTYNTLIAGLCLHGR 389
P Y +I + LE A RL +E+ + + TYN+LI LCL +
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 390 TDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKI 425
+ A+ LF EM +KG+ ++ ++ +LI+G + KI
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 138/347 (39%), Gaps = 44/347 (12%)
Query: 90 IRFFQWLHSHYGFSPDLVSCNVLFDSLVEARAFKVAMDFL------DSTGFSPNPNSLEL 143
I FF W G+ N L D +V KV +FL D F N L
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVL-- 206
Query: 144 YIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESG 203
++ C +G A +LK+ S T+N + +K DR D ++ ++
Sbjct: 207 -VRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS--- 262
Query: 204 YLIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVAR 263
L + DG A++ C+ G+ E L +
Sbjct: 263 ------------------LANLRMDGFTLRCFAYS-----LCK---VGKWREALTLVETE 296
Query: 264 NRAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDA 323
N PD Y ++I+GLC++ EA N ++ +P+ V Y+T++ G LG
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 324 RKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAG 383
+++ M+ +G P+ +NS++H YC + A +L K+M+ G+ V YN LI
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 384 LCLHGRT------DEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGK 424
+C + D A + EM G+ + I ++ + C GK
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 3/223 (1%)
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
L++ C +G S E L ++ + P + +N LI F + S + M N
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVMYTTVIHGLCKMGWLGDAR 324
D FT LCK K EA + ++ +VPDTV YT +I GLC+ +A
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 325 KMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEAKRLHKEMLDKGYGETTVTYNTLIAGL 384
M LPN TY++++ G L KR+ M+ +G + +N+L+
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 385 CLHGRTDEAYHLFEEMAQKGIFRDVITYNTLIQGYCKEGKIVN 427
C G AY L ++M + G + YN LI C + +N
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 117/276 (42%), Gaps = 18/276 (6%)
Query: 98 SHYGFSPDLVSCNVLFDSLVEAR----AFKVAMDFLDSTGFSPNPNSLELYIQCLCESGL 153
S +GF L + + L D + + A KV L+++ +PN I LC+ G
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC-APNVVIYTEMIDGLCKVGK 759
Query: 154 IEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYHDLIESGY--------- 204
+EA+ ++E G ++ T+ + + G I + + +L + G
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 205 LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKKNFGRVSELLHTMVARN 264
LI C +G + + LL ++ + + K+I F K F LL + +
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDD 877
Query: 265 RAPDNFTYEEVINGLCKSRKRLEAYRVFNDLK--ERGYVPDTVMYTTVIHGLCKMGWLGD 322
AP Y +I+ L K+++ A R+ ++ V + Y ++I LC +
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937
Query: 323 ARKMWFEMIHKGLLPNEYTYNSMIHGYCRIDNLEEA 358
A +++ EM KG++P ++ S+I G R + EA
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 133/317 (41%), Gaps = 24/317 (7%)
Query: 26 LRNLSIETKESQQL-YTEIAKQVCKITRTKPRWE-QTLLSD--IPSFNFNDPLFFREFLK 81
L +S+E E Q+ Y + +CK+ + E +T +S+ P+ + + K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 82 QQNNVLLSIRFFQWLHSHYGFSPDLVSCNVLFDSLVEA----RAFKVAMDFLDSTGFSPN 137
+ L S + L + +P++V + D L + A+K+ M ++ G PN
Sbjct: 722 VKRQDLASKVLSKMLEN--SCAPNVVIYTEMIDGLCKVGKTDEAYKL-MQMMEEKGCQPN 778
Query: 138 PNSLELYIQCLCESGLIEEAFCAFSKLKEMGVFGSIKTWNSALLGCIKIDRTDLVWKLYH 197
+ I G IE ++ GV + T+ + C K D+ L
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 198 DLIE-------SGY--LIQAFCNDGKVSEGYELLRQVLEDGLVPENTAFNKLISRFCEKK 248
++ + +GY +I+ F + + E LL ++ +D P + + LI + +
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQ 896
Query: 249 NFGRVSELLHTMVARNRAPDNF--TYEEVINGLCKSRKRLEAYRVFNDLKERGYVPDTVM 306
LL + + ++ TY +I LC + K A+++F+++ ++G +P+
Sbjct: 897 RLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQS 956
Query: 307 YTTVIHGLCKMGWLGDA 323
+ ++I GL + + +A
Sbjct: 957 FCSLIKGLFRNSKISEA 973
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,637,763
Number of Sequences: 539616
Number of extensions: 6866879
Number of successful extensions: 23700
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 15803
Number of HSP's gapped (non-prelim): 2922
length of query: 427
length of database: 191,569,459
effective HSP length: 120
effective length of query: 307
effective length of database: 126,815,539
effective search space: 38932370473
effective search space used: 38932370473
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)