Query 045821
Match_columns 352
No_of_seqs 190 out of 2431
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 09:51:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045821hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 2.1E-43 7.1E-48 313.7 31.7 255 68-329 24-294 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 1.9E-42 6.4E-47 306.6 34.1 252 68-327 15-281 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 1.3E-42 4.5E-47 308.2 32.4 254 68-332 11-282 (306)
4 2vpj_A Kelch-like protein 12; 100.0 1.2E-41 4E-46 301.3 32.5 258 67-332 13-288 (301)
5 4asc_A Kelch repeat and BTB do 100.0 7E-41 2.4E-45 298.3 29.6 249 68-328 4-283 (315)
6 2woz_A Kelch repeat and BTB do 100.0 3.2E-40 1.1E-44 294.5 27.3 249 68-328 15-293 (318)
7 2xn4_A Kelch-like protein 2; s 100.0 8.3E-40 2.8E-44 289.6 25.4 260 36-306 30-302 (302)
8 3ii7_A Kelch-like protein 7; p 100.0 2.2E-39 7.4E-44 287.5 24.1 257 36-302 24-293 (306)
9 4asc_A Kelch repeat and BTB do 100.0 1.9E-39 6.6E-44 289.0 22.4 264 37-311 14-305 (315)
10 1zgk_A Kelch-like ECH-associat 100.0 5.5E-39 1.9E-43 285.2 24.6 257 34-301 37-307 (308)
11 2woz_A Kelch repeat and BTB do 100.0 4.4E-39 1.5E-43 287.1 21.4 262 38-310 26-314 (318)
12 2uvk_A YJHT; unknown function, 100.0 1.1E-38 3.7E-43 289.1 24.1 258 68-332 19-352 (357)
13 2vpj_A Kelch-like protein 12; 100.0 1.9E-38 6.6E-43 280.6 24.0 257 35-302 30-299 (301)
14 2uvk_A YJHT; unknown function, 100.0 6.1E-35 2.1E-39 264.4 24.5 224 99-330 2-302 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.7E-34 5.7E-39 282.1 21.8 245 67-314 396-676 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.8E-31 6E-36 260.8 24.8 212 108-326 387-639 (695)
17 1k3i_A Galactose oxidase precu 100.0 1.2E-31 4.1E-36 261.4 17.9 276 38-329 168-504 (656)
18 1k3i_A Galactose oxidase precu 100.0 1.5E-29 5E-34 246.7 15.7 261 38-312 221-530 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.9 3.9E-07 1.3E-11 83.9 24.9 276 14-324 15-350 (445)
20 3v7d_B Cell division control p 98.9 3.1E-07 1.1E-11 84.9 23.4 40 15-54 12-51 (464)
21 1p22_A F-BOX/WD-repeat protein 98.8 5.5E-07 1.9E-11 82.7 19.7 277 15-324 8-367 (435)
22 3dsm_A Uncharacterized protein 98.6 5.8E-05 2E-09 66.6 25.7 231 71-325 4-256 (328)
23 1fs1_A SKP2 F-BOX, cyclin A/CD 98.5 4.2E-08 1.4E-12 61.6 2.4 44 14-57 5-48 (53)
24 3mbr_X Glutamine cyclotransfer 98.5 6.3E-05 2.1E-09 62.8 21.3 188 110-313 21-225 (243)
25 3dsm_A Uncharacterized protein 98.4 0.00018 6E-09 63.4 25.2 226 68-321 53-301 (328)
26 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.0015 5.2E-08 58.3 29.0 204 84-319 154-375 (376)
27 3nol_A Glutamine cyclotransfer 98.2 0.00018 6.3E-09 60.5 18.4 186 112-313 45-246 (262)
28 2e31_A FBS1, F-box only protei 98.2 5.4E-07 1.9E-11 77.2 2.9 48 15-62 48-96 (297)
29 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0022 7.6E-08 57.2 25.6 189 114-323 48-259 (376)
30 1q7f_A NHL, brain tumor CG1071 98.1 0.0033 1.1E-07 53.6 25.5 233 68-322 40-280 (286)
31 3vgz_A Uncharacterized protein 98.0 0.0048 1.6E-07 54.0 25.1 235 68-325 52-306 (353)
32 3mbr_X Glutamine cyclotransfer 98.0 0.0014 4.6E-08 54.7 19.8 162 159-332 22-189 (243)
33 2z2n_A Virginiamycin B lyase; 98.0 0.0054 1.8E-07 52.3 26.0 225 68-323 67-296 (299)
34 1l0q_A Surface layer protein; 98.0 0.00017 5.8E-09 64.7 15.5 220 69-324 2-235 (391)
35 2qc5_A Streptogramin B lactona 98.0 0.0056 1.9E-07 52.2 25.2 221 68-321 72-299 (300)
36 3nok_A Glutaminyl cyclase; bet 98.0 0.00074 2.5E-08 56.9 17.4 153 112-283 57-214 (268)
37 2z2n_A Virginiamycin B lyase; 97.9 0.0056 1.9E-07 52.2 23.2 223 68-321 25-254 (299)
38 2iwa_A Glutamine cyclotransfer 97.9 0.0021 7.2E-08 54.5 19.6 195 113-322 24-237 (266)
39 1rwi_B Serine/threonine-protei 97.9 0.0025 8.6E-08 53.7 19.8 225 68-324 34-266 (270)
40 1l0q_A Surface layer protein; 97.8 0.00094 3.2E-08 59.7 17.2 222 68-324 43-277 (391)
41 3nol_A Glutamine cyclotransfer 97.8 0.0015 5.3E-08 54.9 16.6 160 161-331 46-210 (262)
42 4ery_A WD repeat-containing pr 97.7 0.013 4.6E-07 50.3 22.5 190 119-324 76-270 (312)
43 1k8k_C P40, ARP2/3 complex 41 97.7 0.0042 1.4E-07 54.8 19.4 234 68-325 19-279 (372)
44 2qc5_A Streptogramin B lactona 97.7 0.019 6.6E-07 48.7 24.0 222 68-321 30-259 (300)
45 3jrp_A Fusion protein of prote 97.6 0.007 2.4E-07 53.4 19.0 234 68-326 22-292 (379)
46 3vgz_A Uncharacterized protein 97.6 0.022 7.6E-07 49.6 21.8 197 119-326 52-266 (353)
47 1ri6_A Putative isomerase YBHE 97.6 0.008 2.7E-07 52.2 18.6 239 68-327 49-315 (343)
48 2iwa_A Glutamine cyclotransfer 97.6 0.009 3.1E-07 50.6 18.0 156 161-327 24-186 (266)
49 3ow8_A WD repeat-containing pr 97.5 0.012 4.2E-07 51.2 19.1 186 120-324 92-281 (321)
50 1rwi_B Serine/threonine-protei 97.5 0.0096 3.3E-07 50.0 17.9 185 119-323 34-223 (270)
51 1gxr_A ESG1, transducin-like e 97.5 0.015 5.2E-07 50.2 19.6 187 119-324 108-298 (337)
52 1got_B GT-beta; complex (GTP-b 97.5 0.03 1E-06 49.0 21.4 190 119-324 108-303 (340)
53 3bws_A Protein LP49; two-domai 97.5 0.0075 2.6E-07 54.5 17.8 195 68-283 133-338 (433)
54 1gxr_A ESG1, transducin-like e 97.5 0.02 6.8E-07 49.4 19.9 181 119-320 152-335 (337)
55 3bws_A Protein LP49; two-domai 97.5 0.0082 2.8E-07 54.3 18.0 217 84-324 102-336 (433)
56 2hqs_A Protein TOLB; TOLB, PAL 97.5 0.019 6.4E-07 52.1 20.3 187 83-287 203-395 (415)
57 4ery_A WD repeat-containing pr 97.4 0.017 5.7E-07 49.8 18.7 188 119-323 34-224 (312)
58 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.044 1.5E-06 49.8 22.1 188 118-327 207-396 (445)
59 3odt_A Protein DOA1; ubiquitin 97.4 0.037 1.3E-06 47.1 20.5 148 167-331 154-305 (313)
60 3v9f_A Two-component system se 97.4 0.013 4.5E-07 57.8 19.6 214 84-324 428-658 (781)
61 3u4y_A Uncharacterized protein 97.4 0.029 9.8E-07 48.6 19.7 247 68-348 51-323 (331)
62 3scy_A Hypothetical bacterial 97.3 0.029 9.8E-07 49.4 19.7 237 68-321 61-336 (361)
63 4aez_A CDC20, WD repeat-contai 97.3 0.027 9.1E-07 50.6 19.7 193 116-325 182-383 (401)
64 4a2l_A BT_4663, two-component 97.3 0.035 1.2E-06 54.9 22.0 212 85-324 429-661 (795)
65 3jrp_A Fusion protein of prote 97.3 0.0074 2.5E-07 53.2 15.6 191 119-324 22-242 (379)
66 3u4y_A Uncharacterized protein 97.3 0.014 4.6E-07 50.7 17.0 232 68-326 9-256 (331)
67 2hqs_A Protein TOLB; TOLB, PAL 97.3 0.034 1.2E-06 50.4 20.2 222 83-323 159-388 (415)
68 1k8k_C P40, ARP2/3 complex 41 97.3 0.0026 9E-08 56.1 12.3 146 119-278 19-172 (372)
69 3scy_A Hypothetical bacterial 97.3 0.022 7.4E-07 50.2 18.2 239 69-321 13-290 (361)
70 2aq5_A Coronin-1A; WD40 repeat 97.3 0.023 7.8E-07 51.0 18.5 190 119-324 93-301 (402)
71 3nok_A Glutaminyl cyclase; bet 97.3 0.018 6.1E-07 48.5 16.0 145 68-239 64-213 (268)
72 3v9f_A Two-component system se 97.2 0.022 7.4E-07 56.3 19.4 172 136-324 427-613 (781)
73 3dwl_C Actin-related protein 2 97.2 0.0022 7.6E-08 56.9 11.2 235 68-326 22-285 (377)
74 3vl1_A 26S proteasome regulato 97.2 0.096 3.3E-06 46.8 22.2 184 119-323 150-366 (420)
75 3ow8_A WD repeat-containing pr 97.2 0.052 1.8E-06 47.1 19.6 147 119-282 133-282 (321)
76 1qhu_A Protein (hemopexin); be 97.2 0.017 5.7E-07 52.9 16.6 200 119-347 158-406 (460)
77 1q7f_A NHL, brain tumor CG1071 97.2 0.045 1.5E-06 46.3 18.8 187 119-322 40-238 (286)
78 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.051 1.8E-06 47.6 18.9 145 119-277 72-223 (345)
79 1got_B GT-beta; complex (GTP-b 97.1 0.057 1.9E-06 47.2 19.1 137 136-281 164-303 (340)
80 3jro_A Fusion protein of prote 97.1 0.01 3.4E-07 58.5 15.3 231 68-322 20-285 (753)
81 2pbi_B Guanine nucleotide-bind 97.1 0.048 1.7E-06 48.0 18.4 145 167-324 165-317 (354)
82 3hfq_A Uncharacterized protein 97.1 0.013 4.5E-07 51.3 14.6 227 81-323 16-272 (347)
83 1p22_A F-BOX/WD-repeat protein 97.1 0.079 2.7E-06 48.0 20.1 188 115-324 138-327 (435)
84 1r5m_A SIR4-interacting protei 97.1 0.069 2.4E-06 47.6 19.5 188 119-324 160-363 (425)
85 1vyh_C Platelet-activating fac 97.0 0.04 1.4E-06 49.7 17.6 187 119-324 161-371 (410)
86 3v7d_B Cell division control p 97.0 0.18 6.3E-06 45.8 24.8 177 118-314 278-454 (464)
87 2ojh_A Uncharacterized protein 97.0 0.079 2.7E-06 44.4 18.4 186 82-286 21-213 (297)
88 4aow_A Guanine nucleotide-bind 97.0 0.11 3.9E-06 44.7 19.8 188 119-324 97-288 (340)
89 2xbg_A YCF48-like protein; pho 97.0 0.15 5.3E-06 44.4 22.7 230 68-327 46-284 (327)
90 1jmx_B Amine dehydrogenase; ox 97.0 0.069 2.4E-06 46.3 18.1 147 68-239 10-178 (349)
91 1kb0_A Quinohemoprotein alcoho 97.0 0.24 8.3E-06 47.9 23.3 117 116-242 74-207 (677)
92 1nir_A Nitrite reductase; hemo 97.0 0.15 5.2E-06 47.9 21.3 274 19-322 95-402 (543)
93 4gqb_B Methylosome protein 50; 96.9 0.11 3.8E-06 45.6 19.3 183 119-322 138-331 (344)
94 3no2_A Uncharacterized protein 96.9 0.073 2.5E-06 45.2 17.5 182 119-324 4-197 (276)
95 3dwl_C Actin-related protein 2 96.9 0.003 1E-07 56.0 9.0 149 119-281 22-179 (377)
96 4a2l_A BT_4663, two-component 96.9 0.067 2.3E-06 52.8 19.5 213 85-325 379-617 (795)
97 3e5z_A Putative gluconolactona 96.9 0.16 5.4E-06 43.2 21.1 225 68-327 39-291 (296)
98 1r5m_A SIR4-interacting protei 96.9 0.049 1.7E-06 48.6 17.1 144 120-281 217-363 (425)
99 4aez_A CDC20, WD repeat-contai 96.9 0.22 7.6E-06 44.4 22.5 217 84-327 114-341 (401)
100 2vdu_B TRNA (guanine-N(7)-)-me 96.9 0.23 8E-06 45.1 21.5 178 119-312 160-373 (450)
101 1qks_A Cytochrome CD1 nitrite 96.9 0.1 3.5E-06 49.3 19.3 282 14-322 105-421 (567)
102 4g56_B MGC81050 protein; prote 96.9 0.025 8.7E-07 50.0 14.3 184 119-323 150-344 (357)
103 3fm0_A Protein CIAO1; WDR39,SG 96.8 0.013 4.3E-07 51.6 12.1 187 119-320 27-223 (345)
104 3k26_A Polycomb protein EED; W 96.8 0.18 6.3E-06 43.7 19.7 190 120-325 85-321 (366)
105 3no2_A Uncharacterized protein 96.8 0.19 6.4E-06 42.7 19.9 212 68-310 4-230 (276)
106 3hfq_A Uncharacterized protein 96.8 0.023 7.8E-07 49.7 13.6 181 136-322 18-218 (347)
107 3ott_A Two-component system se 96.8 0.22 7.4E-06 48.9 21.7 141 167-323 482-627 (758)
108 4g56_B MGC81050 protein; prote 96.8 0.055 1.9E-06 47.8 15.9 177 136-324 115-303 (357)
109 3jro_A Fusion protein of prote 96.8 0.013 4.6E-07 57.5 12.7 189 120-323 21-239 (753)
110 3k26_A Polycomb protein EED; W 96.7 0.14 4.6E-06 44.6 18.1 65 119-191 127-194 (366)
111 2pm9_A Protein WEB1, protein t 96.7 0.11 3.6E-06 46.4 17.5 149 120-281 178-339 (416)
112 2fp8_A Strictosidine synthase; 96.7 0.2 6.9E-06 43.3 18.7 195 113-323 83-314 (322)
113 1ri6_A Putative isomerase YBHE 96.7 0.27 9.2E-06 42.2 19.8 189 119-321 49-261 (343)
114 3g4e_A Regucalcin; six bladed 96.7 0.034 1.2E-06 47.7 13.2 190 119-325 24-232 (297)
115 1yiq_A Quinohemoprotein alcoho 96.6 0.53 1.8E-05 45.6 22.9 117 116-242 67-200 (689)
116 3mkq_A Coatomer beta'-subunit; 96.6 0.13 4.5E-06 50.5 19.0 186 119-324 66-261 (814)
117 2p4o_A Hypothetical protein; p 96.6 0.3 1E-05 41.9 20.0 218 68-311 42-277 (306)
118 3v65_B Low-density lipoprotein 96.6 0.38 1.3E-05 43.0 26.5 211 84-320 97-316 (386)
119 2ojh_A Uncharacterized protein 96.6 0.074 2.5E-06 44.6 14.8 191 84-287 63-266 (297)
120 3zwl_B Eukaryotic translation 96.6 0.21 7.1E-06 43.4 18.2 150 119-283 85-253 (369)
121 1vyh_C Platelet-activating fac 96.6 0.078 2.7E-06 47.8 15.7 146 119-283 119-269 (410)
122 2ynn_A Coatomer subunit beta'; 96.6 0.24 8.3E-06 42.3 18.2 185 119-325 66-262 (304)
123 3ei3_B DNA damage-binding prot 96.6 0.12 4E-06 45.7 16.6 175 136-325 96-285 (383)
124 3odt_A Protein DOA1; ubiquitin 96.6 0.29 1E-05 41.4 19.5 144 167-325 113-258 (313)
125 3e5z_A Putative gluconolactona 96.5 0.095 3.3E-06 44.6 15.3 187 120-322 40-246 (296)
126 2pbi_B Guanine nucleotide-bind 96.5 0.15 5.1E-06 44.8 16.6 137 135-281 175-317 (354)
127 3dm0_A Maltose-binding peripla 96.4 0.19 6.7E-06 48.6 18.5 187 119-325 441-635 (694)
128 2dg1_A DRP35, lactonase; beta 96.4 0.11 3.6E-06 45.0 15.2 190 119-321 55-262 (333)
129 1pjx_A Dfpase, DIISOPROPYLFLUO 96.4 0.15 5.2E-06 43.5 16.1 233 68-324 28-301 (314)
130 1npe_A Nidogen, entactin; glyc 96.4 0.33 1.1E-05 40.5 22.2 186 119-324 47-240 (267)
131 1pby_B Quinohemoprotein amine 96.4 0.29 1E-05 41.9 18.0 236 68-326 45-314 (337)
132 2hes_X YDR267CP; beta-propelle 96.4 0.21 7.2E-06 43.3 17.1 151 167-325 118-283 (330)
133 3ei3_B DNA damage-binding prot 96.4 0.15 5.1E-06 45.0 16.2 183 119-322 174-382 (383)
134 2pm9_A Protein WEB1, protein t 96.4 0.12 4E-06 46.1 15.5 189 120-324 126-339 (416)
135 3pe7_A Oligogalacturonate lyas 96.4 0.25 8.7E-06 43.5 17.6 243 68-324 46-331 (388)
136 1nir_A Nitrite reductase; hemo 96.3 0.36 1.2E-05 45.3 19.2 184 135-325 247-461 (543)
137 1sq9_A Antiviral protein SKI8; 96.3 0.41 1.4E-05 42.2 18.9 189 121-324 82-324 (397)
138 2aq5_A Coronin-1A; WD40 repeat 96.3 0.14 4.9E-06 45.6 15.9 191 121-324 145-344 (402)
139 1erj_A Transcriptional repress 96.3 0.42 1.4E-05 42.5 18.9 185 119-322 176-389 (393)
140 2ynn_A Coatomer subunit beta'; 96.3 0.36 1.2E-05 41.2 17.8 181 119-323 108-303 (304)
141 3mkq_A Coatomer beta'-subunit; 96.3 0.064 2.2E-06 52.7 14.5 176 136-324 35-219 (814)
142 4a11_B DNA excision repair pro 96.3 0.041 1.4E-06 48.8 12.1 147 119-281 111-278 (408)
143 1npe_A Nidogen, entactin; glyc 96.3 0.41 1.4E-05 40.0 22.7 190 68-283 47-242 (267)
144 1ijq_A LDL receptor, low-densi 96.3 0.5 1.7E-05 40.8 26.5 212 84-322 11-238 (316)
145 2ghs_A AGR_C_1268P; regucalcin 96.3 0.25 8.5E-06 42.9 16.5 144 119-278 60-209 (326)
146 2pm7_B Protein transport prote 96.2 0.47 1.6E-05 40.3 18.2 193 120-327 67-291 (297)
147 3i2n_A WD repeat-containing pr 96.2 0.44 1.5E-05 41.1 18.1 186 120-324 80-293 (357)
148 3hrp_A Uncharacterized protein 96.2 0.67 2.3E-05 41.7 21.6 230 68-320 141-408 (409)
149 3frx_A Guanine nucleotide-bind 96.2 0.33 1.1E-05 41.8 17.0 182 119-322 76-267 (319)
150 4gqb_B Methylosome protein 50; 96.2 0.08 2.7E-06 46.6 13.0 174 136-323 103-290 (344)
151 3l2o_B F-box only protein 4; s 96.2 0.00071 2.4E-08 57.5 -0.3 41 17-57 4-44 (312)
152 1kv9_A Type II quinohemoprotei 96.2 1 3.4E-05 43.5 23.6 118 115-242 62-195 (668)
153 2hes_X YDR267CP; beta-propelle 96.1 0.47 1.6E-05 41.0 17.8 190 119-322 118-328 (330)
154 1sq9_A Antiviral protein SKI8; 96.1 0.57 1.9E-05 41.3 18.6 191 118-324 24-269 (397)
155 2ad6_A Methanol dehydrogenase 96.1 0.98 3.4E-05 42.7 24.6 118 116-242 59-193 (571)
156 3zwl_B Eukaryotic translation 96.1 0.066 2.2E-06 46.7 12.0 191 119-325 43-252 (369)
157 2pm7_B Protein transport prote 96.1 0.15 5.2E-06 43.4 14.0 188 119-322 20-238 (297)
158 1qhu_A Protein (hemopexin); be 96.1 0.84 2.9E-05 41.7 22.1 136 167-322 158-331 (460)
159 3vl1_A 26S proteasome regulato 96.1 0.73 2.5E-05 40.9 26.0 147 167-322 258-419 (420)
160 4aow_A Guanine nucleotide-bind 96.1 0.6 2.1E-05 39.9 18.2 145 169-323 186-338 (340)
161 1pgu_A Actin interacting prote 96.0 0.77 2.6E-05 43.1 20.1 143 170-322 175-328 (615)
162 3v64_C Agrin; beta propeller, 96.0 0.7 2.4E-05 40.6 28.1 209 84-320 54-273 (349)
163 1pgu_A Actin interacting prote 96.0 0.35 1.2E-05 45.4 17.7 190 119-324 77-285 (615)
164 3g4e_A Regucalcin; six bladed 96.0 0.3 1E-05 41.6 15.7 213 68-312 24-262 (297)
165 1pjx_A Dfpase, DIISOPROPYLFLUO 96.0 0.3 1E-05 41.6 15.6 199 119-324 28-258 (314)
166 3c5m_A Oligogalacturonate lyas 96.0 0.61 2.1E-05 41.0 18.1 192 83-285 168-390 (396)
167 2xbg_A YCF48-like protein; pho 96.0 0.7 2.4E-05 40.1 26.1 204 93-319 107-319 (327)
168 3m0c_C LDL receptor, low-densi 96.0 1.4 4.7E-05 43.4 26.0 182 119-320 435-630 (791)
169 1pby_B Quinohemoprotein amine 96.0 0.23 8E-06 42.5 15.0 139 84-240 12-167 (337)
170 1erj_A Transcriptional repress 96.0 0.087 3E-06 47.1 12.5 145 119-280 134-288 (393)
171 3azo_A Aminopeptidase; POP fam 95.9 0.75 2.6E-05 44.0 19.4 181 135-324 160-371 (662)
172 1yfq_A Cell cycle arrest prote 95.9 0.43 1.5E-05 41.0 16.2 145 119-280 67-226 (342)
173 3p5b_L Low density lipoprotein 95.9 0.95 3.3E-05 40.6 25.7 214 84-321 93-319 (400)
174 3bg1_A Protein SEC13 homolog; 95.8 0.087 3E-06 45.5 11.5 189 119-322 24-247 (316)
175 3bg1_A Protein SEC13 homolog; 95.8 0.3 1E-05 42.0 14.9 190 120-327 71-299 (316)
176 3azo_A Aminopeptidase; POP fam 95.8 0.43 1.5E-05 45.7 17.4 192 82-286 160-376 (662)
177 2dg1_A DRP35, lactonase; beta 95.8 0.16 5.5E-06 43.9 13.1 147 167-322 55-213 (333)
178 3i2n_A WD repeat-containing pr 95.8 0.29 9.9E-06 42.3 14.9 187 121-324 32-245 (357)
179 2ast_B S-phase kinase-associat 95.7 0.0025 8.6E-08 56.0 1.2 43 13-55 4-46 (336)
180 1pex_A Collagenase-3, MMP-13; 95.7 0.62 2.1E-05 37.6 18.8 147 114-284 28-197 (207)
181 4e54_B DNA damage-binding prot 95.7 0.27 9.3E-06 44.4 14.9 146 119-281 176-329 (435)
182 1n7d_A LDL receptor, low-densi 95.7 0.44 1.5E-05 46.3 17.0 184 119-322 417-614 (699)
183 2ad6_A Methanol dehydrogenase 95.7 1.4 4.8E-05 41.6 23.2 202 68-281 62-337 (571)
184 3hxj_A Pyrrolo-quinoline quino 95.7 0.84 2.9E-05 39.0 18.6 172 118-321 106-283 (330)
185 2z3z_A Dipeptidyl aminopeptida 95.7 0.83 2.8E-05 44.0 18.9 190 82-281 234-437 (706)
186 4e54_B DNA damage-binding prot 95.7 0.17 5.8E-06 45.8 13.1 188 119-323 131-328 (435)
187 2z3z_A Dipeptidyl aminopeptida 95.6 1.7 5.7E-05 41.9 21.7 107 180-286 235-351 (706)
188 3fvz_A Peptidyl-glycine alpha- 95.6 0.98 3.3E-05 39.0 28.7 221 84-322 70-322 (329)
189 3hrp_A Uncharacterized protein 95.6 1.2 4.2E-05 40.0 19.5 187 119-322 141-354 (409)
190 1kb0_A Quinohemoprotein alcoho 95.6 1.8 6.1E-05 41.8 22.7 117 68-196 77-208 (677)
191 3f3f_A Nucleoporin SEH1; struc 95.6 0.92 3.2E-05 38.6 23.6 192 68-280 22-250 (351)
192 3sfz_A APAF-1, apoptotic pepti 95.6 0.11 3.7E-06 54.0 12.9 187 119-325 972-1161(1249)
193 3sfz_A APAF-1, apoptotic pepti 95.6 1 3.6E-05 46.6 20.3 188 119-323 668-872 (1249)
194 3lrv_A PRE-mRNA-splicing facto 95.5 1.1 3.7E-05 38.8 24.4 150 167-327 138-299 (343)
195 3iz6_a 40S ribosomal protein R 95.5 1.2 4.2E-05 39.2 19.9 147 169-324 171-331 (380)
196 2ecf_A Dipeptidyl peptidase IV 95.4 0.86 2.9E-05 44.2 18.2 104 181-286 264-375 (741)
197 3mmy_A MRNA export factor; mRN 95.4 0.49 1.7E-05 40.9 15.0 143 119-280 97-248 (368)
198 1jmx_B Amine dehydrogenase; ox 95.4 0.089 3.1E-06 45.5 10.1 147 167-324 10-177 (349)
199 3b7f_A Glycosyl hydrolase, BNR 95.4 1.4 4.7E-05 39.3 24.3 218 68-309 22-296 (394)
200 2vdu_B TRNA (guanine-N(7)-)-me 95.3 0.46 1.6E-05 43.1 15.0 148 121-283 116-275 (450)
201 2bkl_A Prolyl endopeptidase; m 95.3 2.2 7.4E-05 41.2 20.5 195 82-285 146-357 (695)
202 3c5m_A Oligogalacturonate lyas 95.3 0.56 1.9E-05 41.2 15.2 147 135-287 167-337 (396)
203 4a11_B DNA excision repair pro 95.3 0.095 3.2E-06 46.4 10.1 104 167-281 111-220 (408)
204 1w6s_A Methanol dehydrogenase 95.3 2 7E-05 40.7 22.9 119 115-242 58-199 (599)
205 3v65_B Low-density lipoprotein 95.2 1.5 5.3E-05 39.0 21.4 174 84-280 139-319 (386)
206 3ott_A Two-component system se 95.1 2.7 9.3E-05 41.0 23.0 178 119-324 73-262 (758)
207 3b7f_A Glycosyl hydrolase, BNR 95.1 1.5 5.1E-05 39.0 17.3 183 137-328 32-268 (394)
208 2hz6_A Endoplasmic reticulum t 95.1 0.026 8.9E-07 50.3 5.5 143 116-284 6-156 (369)
209 4gga_A P55CDC, cell division c 95.0 1.8 6.2E-05 38.6 22.2 218 84-324 126-355 (420)
210 1w6s_A Methanol dehydrogenase 94.9 2.6 9E-05 40.0 20.6 118 68-196 62-200 (599)
211 3pe7_A Oligogalacturonate lyas 94.9 0.83 2.8E-05 40.1 15.0 193 83-282 168-387 (388)
212 1itv_A MMP9; adaptive molecula 94.9 1.1 3.9E-05 35.6 14.9 147 162-324 11-176 (195)
213 2fp8_A Strictosidine synthase; 94.8 1.7 5.8E-05 37.3 17.6 198 68-280 91-314 (322)
214 2ecf_A Dipeptidyl peptidase IV 94.8 1.7 5.9E-05 42.0 18.2 56 136-196 129-188 (741)
215 1pex_A Collagenase-3, MMP-13; 94.7 1.3 4.6E-05 35.6 18.7 147 162-324 28-194 (207)
216 3f3f_A Nucleoporin SEH1; struc 94.7 0.93 3.2E-05 38.6 14.4 190 119-323 22-250 (351)
217 4h5i_A Guanine nucleotide-exch 94.6 2.1 7.3E-05 37.5 17.0 148 119-279 187-343 (365)
218 3fvz_A Peptidyl-glycine alpha- 94.5 2.1 7.2E-05 36.8 21.7 198 68-279 101-322 (329)
219 2xyi_A Probable histone-bindin 94.5 0.81 2.8E-05 41.2 14.0 141 170-322 196-353 (430)
220 3lrv_A PRE-mRNA-splicing facto 94.4 2.2 7.5E-05 36.8 19.8 151 119-284 138-299 (343)
221 3oyo_A Hemopexin fold protein 94.4 0.86 2.9E-05 37.3 12.5 139 118-278 12-197 (225)
222 3dr2_A Exported gluconolactona 94.4 2.1 7.3E-05 36.3 17.7 155 119-286 96-274 (305)
223 3v64_C Agrin; beta propeller, 94.3 2.5 8.5E-05 37.0 22.2 184 68-280 84-276 (349)
224 3c7x_A Matrix metalloproteinas 94.2 1 3.5E-05 35.9 12.4 143 162-324 10-177 (196)
225 1kv9_A Type II quinohemoprotei 94.2 4.2 0.00014 39.1 22.9 116 68-195 66-195 (668)
226 3iz6_a 40S ribosomal protein R 94.1 2.8 9.6E-05 36.8 18.9 146 119-280 217-376 (380)
227 3oyo_A Hemopexin fold protein 94.1 1.3 4.4E-05 36.2 13.0 147 167-328 13-208 (225)
228 2xyi_A Probable histone-bindin 94.0 2 6.7E-05 38.6 15.6 102 167-279 243-353 (430)
229 1su3_A Interstitial collagenas 94.0 3.5 0.00012 37.5 17.6 145 114-285 267-438 (450)
230 3mmy_A MRNA export factor; mRN 94.0 0.91 3.1E-05 39.1 12.9 143 168-323 54-200 (368)
231 2p1m_B Transport inhibitor res 93.9 0.012 4E-07 56.0 0.5 37 15-51 3-40 (594)
232 3ba0_A Macrophage metalloelast 93.9 3.1 0.00011 36.7 18.1 144 114-284 185-355 (365)
233 2ghs_A AGR_C_1268P; regucalcin 93.9 2.9 9.8E-05 36.0 17.2 186 68-285 60-266 (326)
234 1yiq_A Quinohemoprotein alcoho 93.9 5 0.00017 38.8 23.1 116 68-195 70-200 (689)
235 2bkl_A Prolyl endopeptidase; m 93.8 3.9 0.00013 39.4 18.1 148 135-287 251-405 (695)
236 3dr2_A Exported gluconolactona 93.5 1.8 6E-05 36.8 13.7 185 120-322 57-267 (305)
237 1itv_A MMP9; adaptive molecula 93.5 2.3 7.9E-05 33.8 16.3 146 114-283 11-178 (195)
238 2cn3_A Xyloglucanase, beta-1,4 93.5 1.8 6E-05 42.3 15.1 162 145-321 555-732 (737)
239 3dm0_A Maltose-binding peripla 93.3 6 0.00021 37.9 19.8 104 169-283 532-636 (694)
240 3hxj_A Pyrrolo-quinoline quino 93.3 3.4 0.00012 35.0 20.6 208 68-321 107-322 (330)
241 1nr0_A Actin interacting prote 93.2 5.7 0.00019 37.5 20.2 105 170-284 162-275 (611)
242 3lp9_A LS-24; SEED albumin, pl 93.2 0.7 2.4E-05 37.9 10.0 101 166-280 71-202 (227)
243 2p4o_A Hypothetical protein; p 93.2 3.5 0.00012 35.0 21.4 183 119-321 42-241 (306)
244 1su3_A Interstitial collagenas 93.1 5.1 0.00017 36.5 16.3 148 162-325 267-435 (450)
245 1ijq_A LDL receptor, low-densi 93.0 4 0.00014 35.0 23.5 187 68-281 41-240 (316)
246 2xzm_R RACK1; ribosome, transl 92.9 4.1 0.00014 35.1 18.6 186 119-324 87-287 (343)
247 3o4h_A Acylamino-acid-releasin 92.7 1.1 3.9E-05 42.0 12.1 174 87-285 136-320 (582)
248 2xzm_R RACK1; ribosome, transl 92.5 4.7 0.00016 34.7 17.3 142 167-321 87-243 (343)
249 3m0c_C LDL receptor, low-densi 92.5 8.7 0.0003 37.8 22.8 146 118-280 481-633 (791)
250 3iuj_A Prolyl endopeptidase; h 92.4 8.2 0.00028 37.2 22.8 193 82-286 154-366 (693)
251 1qks_A Cytochrome CD1 nitrite 92.4 7.3 0.00025 36.6 20.2 192 120-323 256-478 (567)
252 3p5b_L Low density lipoprotein 92.4 5.8 0.0002 35.4 21.4 146 118-280 169-321 (400)
253 2xdw_A Prolyl endopeptidase; a 92.4 8.3 0.00028 37.2 20.4 146 135-287 258-424 (710)
254 3dw8_B Serine/threonine-protei 92.4 4.7 0.00016 35.8 15.5 108 169-285 240-379 (447)
255 1nr0_A Actin interacting prote 92.2 7.8 0.00027 36.6 20.6 151 119-285 201-361 (611)
256 1n7d_A LDL receptor, low-densi 92.2 2.7 9.3E-05 40.7 14.2 149 118-283 463-618 (699)
257 3o4h_A Acylamino-acid-releasin 92.0 2 6.9E-05 40.2 13.0 139 135-283 89-231 (582)
258 1jof_A Carboxy-CIS,CIS-muconat 92.0 2.5 8.6E-05 36.9 12.8 66 74-149 7-74 (365)
259 1yr2_A Prolyl oligopeptidase; 91.9 3.5 0.00012 40.1 14.8 146 135-287 293-449 (741)
260 3c7x_A Matrix metalloproteinas 91.9 4 0.00014 32.5 14.5 142 115-281 11-177 (196)
261 4ggc_A P55CDC, cell division c 91.7 5.2 0.00018 33.5 22.1 228 71-324 38-275 (318)
262 1k32_A Tricorn protease; prote 91.7 12 0.00043 37.8 20.3 191 69-286 214-416 (1045)
263 3frx_A Guanine nucleotide-bind 91.6 5.7 0.0002 33.8 17.9 185 119-322 118-317 (319)
264 1hxn_A Hemopexin, HPX; heme, b 91.4 5 0.00017 32.5 14.8 138 166-322 27-197 (219)
265 1gen_A Gelatinase A; hydrolase 91.3 5 0.00017 32.5 17.2 144 114-281 35-204 (218)
266 1flg_A Protein (quinoprotein e 91.2 10 0.00034 35.8 24.8 116 116-241 65-200 (582)
267 3vu4_A KMHSV2; beta-propeller 91.2 6.9 0.00024 33.9 19.2 183 119-324 70-273 (355)
268 2ece_A 462AA long hypothetical 91.1 8.6 0.0003 34.9 19.5 29 118-147 147-175 (462)
269 1yr2_A Prolyl oligopeptidase; 91.1 10 0.00035 36.8 17.2 164 68-244 279-449 (741)
270 2xdw_A Prolyl endopeptidase; a 91.1 11 0.00039 36.2 24.4 195 82-286 150-376 (710)
271 1flg_A Protein (quinoprotein e 91.0 6.5 0.00022 37.1 15.2 114 161-284 62-200 (582)
272 3lp9_A LS-24; SEED albumin, pl 91.0 1.6 5.5E-05 35.7 9.6 142 167-323 15-202 (227)
273 1yfq_A Cell cycle arrest prote 91.0 6.6 0.00023 33.3 15.0 144 167-322 22-179 (342)
274 4gga_A P55CDC, cell division c 91.0 4.4 0.00015 36.0 13.6 94 180-281 125-220 (420)
275 3ba0_A Macrophage metalloelast 90.7 8.3 0.00029 33.9 17.0 146 162-325 185-353 (365)
276 2ymu_A WD-40 repeat protein; u 90.7 10 0.00035 35.0 19.3 181 119-321 314-497 (577)
277 3gre_A Serine/threonine-protei 90.5 8.9 0.00031 34.0 15.8 148 119-281 181-361 (437)
278 3iuj_A Prolyl endopeptidase; h 90.5 13 0.00044 35.8 17.3 148 83-244 259-413 (693)
279 3sov_A LRP-6, low-density lipo 90.1 8.4 0.00029 33.1 24.8 184 119-323 46-239 (318)
280 4a0p_A LRP6, LRP-6, low-densit 89.7 14 0.00049 35.1 20.9 183 68-280 48-238 (628)
281 1hxn_A Hemopexin, HPX; heme, b 89.6 7.3 0.00025 31.5 14.1 136 118-279 27-197 (219)
282 2gop_A Trilobed protease; beta 89.2 9.6 0.00033 32.4 14.4 134 135-285 151-297 (347)
283 2oiz_A Aromatic amine dehydrog 89.0 11 0.00037 32.9 18.2 62 258-323 265-335 (361)
284 3tc9_A Hypothetical hydrolase; 88.8 3.5 0.00012 37.3 11.0 143 167-321 149-300 (430)
285 2hz6_A Endoplasmic reticulum t 88.8 0.25 8.5E-06 43.8 3.2 145 163-328 5-157 (369)
286 3ogk_B Coronatine-insensitive 88.6 0.084 2.9E-06 50.0 -0.0 33 19-51 14-47 (592)
287 1xfd_A DIP, dipeptidyl aminope 88.5 11 0.00039 36.0 15.1 100 181-281 229-347 (723)
288 1k32_A Tricorn protease; prote 88.4 4.7 0.00016 41.0 12.8 142 136-286 317-468 (1045)
289 2ymu_A WD-40 repeat protein; u 88.4 15 0.00053 33.8 18.8 181 119-321 273-456 (577)
290 1gen_A Gelatinase A; hydrolase 88.2 9 0.00031 30.9 16.4 148 161-324 34-204 (218)
291 4ggc_A P55CDC, cell division c 87.8 11 0.00037 31.4 13.6 136 180-324 45-183 (318)
292 1xfd_A DIP, dipeptidyl aminope 87.7 18 0.0006 34.6 15.9 108 84-196 38-150 (723)
293 4h5i_A Guanine nucleotide-exch 87.4 14 0.00047 32.1 23.0 196 135-340 156-360 (365)
294 3ju4_A Endo-N-acetylneuraminid 87.1 16 0.00055 32.5 14.1 116 152-267 278-406 (670)
295 3gre_A Serine/threonine-protei 87.0 16 0.00054 32.3 16.6 147 167-325 181-362 (437)
296 4hw6_A Hypothetical protein, I 87.0 12 0.00042 33.7 13.4 143 168-321 153-303 (433)
297 3tc9_A Hypothetical hydrolase; 86.6 18 0.0006 32.6 19.5 227 68-321 149-429 (430)
298 3sre_A PON1, serum paraoxonase 85.8 17 0.0006 31.7 16.4 158 68-236 60-252 (355)
299 2gop_A Trilobed protease; beta 85.2 13 0.00044 31.6 12.3 137 135-286 84-258 (347)
300 3dw8_B Serine/threonine-protei 85.1 19 0.00066 31.7 16.2 103 167-279 188-315 (447)
301 4a0p_A LRP6, LRP-6, low-densit 84.8 27 0.00094 33.2 27.4 211 84-321 16-236 (628)
302 3sov_A LRP-6, low-density lipo 84.2 19 0.00065 30.8 22.1 145 118-281 89-240 (318)
303 2cn3_A Xyloglucanase, beta-1,4 83.7 14 0.00049 35.8 13.0 145 168-328 538-693 (737)
304 2oaj_A Protein SNI1; WD40 repe 83.5 29 0.00099 34.6 15.4 104 168-283 69-186 (902)
305 3vu4_A KMHSV2; beta-propeller 83.3 21 0.00073 30.7 23.5 64 211-280 206-272 (355)
306 1ck7_A Protein (gelatinase A); 82.7 5.6 0.00019 37.8 9.1 145 113-281 447-617 (631)
307 1jof_A Carboxy-CIS,CIS-muconat 79.8 29 0.00099 29.9 19.1 147 136-285 167-347 (365)
308 2mad_H Methylamine dehydrogena 79.3 32 0.0011 30.1 25.9 116 68-192 32-159 (373)
309 2p9w_A MAL S 1 allergenic prot 75.4 39 0.0014 29.2 23.0 228 68-311 24-303 (334)
310 1ck7_A Protein (gelatinase A); 75.2 16 0.00056 34.7 9.8 123 206-344 448-590 (631)
311 2xe4_A Oligopeptidase B; hydro 73.5 69 0.0024 31.1 15.3 147 135-287 294-466 (751)
312 3sjl_D Methylamine dehydrogena 71.8 53 0.0018 29.0 19.2 116 68-192 44-172 (386)
313 3a0f_A Xyloglucanase; beta-pro 70.6 41 0.0014 32.8 11.9 150 168-329 557-724 (763)
314 2qe8_A Uncharacterized protein 69.6 52 0.0018 28.0 11.4 111 211-324 27-156 (343)
315 4hw6_A Hypothetical protein, I 68.7 65 0.0022 28.8 20.3 227 69-321 153-432 (433)
316 2be1_A Serine/threonine-protei 67.1 18 0.00061 31.4 7.6 108 168-285 11-138 (339)
317 2oaj_A Protein SNI1; WD40 repe 64.2 1.2E+02 0.004 30.2 15.4 145 167-324 28-184 (902)
318 3c75_H MADH, methylamine dehyd 64.1 81 0.0028 28.2 19.2 117 68-192 84-212 (426)
319 4hvt_A Ritya.17583.B, post-pro 61.7 1.2E+02 0.004 29.3 15.6 124 163-290 295-440 (711)
320 4hvt_A Ritya.17583.B, post-pro 59.5 1.3E+02 0.0044 29.0 13.5 151 83-244 269-437 (711)
321 3kya_A Putative phosphatase; s 58.6 1.1E+02 0.0038 28.0 20.4 239 68-325 151-478 (496)
322 3qqz_A Putative uncharacterize 57.7 79 0.0027 26.0 23.7 189 119-321 38-252 (255)
323 3f6k_A Sortilin; protein sorti 54.5 63 0.0022 31.1 9.5 104 180-286 65-176 (685)
324 3sjl_D Methylamine dehydrogena 51.0 1.3E+02 0.0044 26.5 20.7 65 258-325 291-366 (386)
325 3c75_H MADH, methylamine dehyd 51.0 1.4E+02 0.0047 26.7 15.2 113 119-240 84-213 (426)
326 3ei3_A DNA damage-binding prot 51.0 2.2E+02 0.0077 29.2 15.1 136 134-278 862-1000(1158)
327 2mad_H Methylamine dehydrogena 50.7 1.2E+02 0.0042 26.2 25.4 64 258-324 278-352 (373)
328 3sre_A PON1, serum paraoxonase 50.1 1.3E+02 0.0044 26.2 17.7 111 70-189 128-252 (355)
329 3s94_A LRP-6, low-density lipo 49.3 1.7E+02 0.006 27.5 26.1 185 119-322 360-551 (619)
330 2oit_A Nucleoporin 214KDA; NH2 47.6 66 0.0022 28.7 8.2 61 212-280 162-224 (434)
331 3s94_A LRP-6, low-density lipo 47.5 1.9E+02 0.0064 27.3 23.8 184 119-322 51-243 (619)
332 4a5s_A Dipeptidyl peptidase 4 47.0 2E+02 0.0068 27.5 16.7 54 228-281 229-296 (740)
333 3kya_A Putative phosphatase; s 46.6 1.5E+02 0.0051 27.1 10.4 106 168-278 152-277 (496)
334 3ei3_A DNA damage-binding prot 45.1 2.8E+02 0.0094 28.6 14.2 114 180-303 864-979 (1158)
335 3a0f_A Xyloglucanase; beta-pro 44.2 2.3E+02 0.0079 27.4 19.5 159 145-320 577-760 (763)
336 2ece_A 462AA long hypothetical 42.9 1.9E+02 0.0066 26.2 21.4 118 65-191 22-175 (462)
337 2be1_A Serine/threonine-protei 42.6 16 0.00054 31.8 3.1 26 258-283 55-80 (339)
338 2xe4_A Oligopeptidase B; hydro 42.2 2.4E+02 0.0083 27.1 19.1 140 136-277 247-398 (751)
339 2j04_A TAU60, YPL007P, hypothe 42.2 2.2E+02 0.0076 26.7 16.0 144 167-324 96-256 (588)
340 1fwx_A Nitrous oxide reductase 40.8 2.4E+02 0.0081 26.6 11.3 200 110-322 86-361 (595)
341 1sqj_A OXG-RCBH, oligoxylogluc 40.4 2.7E+02 0.0092 27.1 25.6 195 85-290 39-280 (789)
342 1fwx_A Nitrous oxide reductase 37.6 2.5E+02 0.0084 26.4 10.4 69 168-238 102-186 (595)
343 2kwv_A RAD30 homolog B, DNA po 37.6 22 0.00075 20.5 2.1 21 15-35 18-38 (48)
344 4gq1_A NUP37; propeller, trans 37.4 2E+02 0.0068 24.8 14.4 63 119-191 155-220 (393)
345 2w18_A PALB2, fancn, partner a 37.1 2.1E+02 0.0071 24.9 20.3 146 120-277 193-355 (356)
346 2oiz_A Aromatic amine dehydrog 36.2 49 0.0017 28.6 5.3 109 213-324 17-142 (361)
347 1z68_A Fibroblast activation p 35.4 2.7E+02 0.0092 26.3 10.9 148 135-283 277-447 (719)
348 4gq1_A NUP37; propeller, trans 35.0 1.5E+02 0.0052 25.5 8.5 104 169-282 102-221 (393)
349 2oit_A Nucleoporin 214KDA; NH2 34.3 2.4E+02 0.0083 24.8 14.7 66 120-195 162-229 (434)
350 3qqz_A Putative uncharacterize 30.9 2.2E+02 0.0075 23.3 17.5 149 167-323 38-205 (255)
351 1mda_H Methylamine dehydrogena 30.8 2.6E+02 0.009 24.2 13.3 237 68-327 31-308 (368)
352 3amr_A 3-phytase; beta-propell 29.8 2.8E+02 0.0094 24.1 13.5 93 135-235 98-209 (355)
353 2qe8_A Uncharacterized protein 29.2 2.5E+02 0.0087 23.5 17.9 117 119-242 27-161 (343)
354 4a5s_A Dipeptidyl peptidase 4 29.1 3.8E+02 0.013 25.5 19.9 128 180-312 228-383 (740)
355 2l9b_B MRNA 3'-END-processing 22.5 49 0.0017 19.6 1.8 20 20-40 6-25 (53)
356 2j04_B YDR362CP, TAU91; beta p 22.2 1.3E+02 0.0046 27.5 5.9 101 169-281 324-430 (524)
357 3a9g_A Putative uncharacterize 20.6 4E+02 0.014 22.7 10.9 108 167-279 39-178 (354)
358 3ju4_A Endo-N-acetylneuraminid 20.1 4.8E+02 0.016 23.4 12.8 119 103-221 277-407 (670)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.1e-43 Score=313.68 Aligned_cols=255 Identities=20% Similarity=0.318 Sum_probs=223.4
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCC---CCCCCCCeEEEEECC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCG---WSEDATSEVYCYDAS 144 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~~d~~ 144 (352)
++.||++||.+......++.||+ .+++|..++++| .+|.+++++.++++||++||.. ......+++++||+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~--~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNP--SNGTWLRLADLQ---VPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEET--TTTEEEECCCCS---SCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCCcceEEEEcC--CCCeEeECCCCC---cccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 88999999974444456899999 999999999888 6789999999999999999973 222457899999999
Q ss_pred CCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC---CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCC
Q 045821 145 MNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT---HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSAS 221 (352)
Q Consensus 145 t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~---~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~ 221 (352)
+++|+.++++|.+|..|+++.++++||++||.... +++++||+.+++|+.++++|.++..+++++++++||++||..
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCC
Confidence 99999999999999999999999999999997654 889999999999999999999999999999999999999988
Q ss_pred CCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC----CeEEEEeCCCCceEEccCCCCCcCCCCc
Q 045821 222 AATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG----TKLMMWQKESREWSPVGRLSTLLTRPPC 297 (352)
Q Consensus 222 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~----~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 297 (352)
......++++||+.+++|+.+++.+..+..+.++..+++||++||..+ +++++||+++++|++++.+|. .+..+
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--~r~~~ 256 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH--RRSAL 256 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSS--CCBSC
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCC--Cccce
Confidence 766677999999999999999876655555566788999999999764 589999999999999998876 57788
Q ss_pred eEEEeCCEEEEEcCCc------eEEEEEcCCcccccce
Q 045821 298 KLVAIGKTIFVIGKGC------SAVVIDVGNIGNIGGI 329 (352)
Q Consensus 298 ~~~~~~~~i~v~gG~~------~~~~~d~~~~~w~~~~ 329 (352)
+++.++++||++||.. ++++||+++++|.+..
T Consensus 257 ~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 257 GITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp EEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred EEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 8888999999999943 5778999999998753
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.9e-42 Score=306.64 Aligned_cols=252 Identities=19% Similarity=0.297 Sum_probs=221.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT 147 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~ 147 (352)
++.||++||.+.......+.||+ .+++|..++++| .+|..++++.++++||++||.+.. ...+++++||+.+++
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~--~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDF--KEERWHQVAELP---SRRCRAGMVYMAGLVFAVGGFNGS-LRVRTVDSYDPVKDQ 88 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEET--TTTEEEEECCCS---SCCBSCEEEEETTEEEEESCBCSS-SBCCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCCCCcEEEEcC--cCCcEeEcccCC---cccccceEEEECCEEEEEeCcCCC-ccccceEEECCCCCc
Confidence 78899999986544556899999 999999999888 678999999999999999998654 567899999999999
Q ss_pred eEecCCCCCcceeeeeEEECCEEEEEeCCCCC---CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCC
Q 045821 148 WTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT---HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAAT 224 (352)
Q Consensus 148 W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~---~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~ 224 (352)
|+.++++|.+|..|+++.++++||++||.... +++++||+.+++|+.++++|.++..+++++++++||++||.....
T Consensus 89 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVAS 168 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTT
T ss_pred eeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCC
Confidence 99999999999999999999999999997654 789999999999999999999998888999999999999986543
Q ss_pred C--ceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC----CeEEEEeCCCCceEEccCCCCCcCCCCce
Q 045821 225 S--HVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG----TKLMMWQKESREWSPVGRLSTLLTRPPCK 298 (352)
Q Consensus 225 ~--~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~----~~v~~yd~~~~~W~~~~~~~~~~~~~~~~ 298 (352)
. ..++++||+.+++|+.+++.+..+..+.++..+++||++||..+ +++++||+++++|++++.+|. .+..++
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~r~~~~ 246 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM--CRRNAG 246 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS--CCBSCE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC--ccccCe
Confidence 2 45899999999999999876655555566788999999999754 589999999999999998876 477788
Q ss_pred EEEeCCEEEEEcCCc------eEEEEEcCCccccc
Q 045821 299 LVAIGKTIFVIGKGC------SAVVIDVGNIGNIG 327 (352)
Q Consensus 299 ~~~~~~~i~v~gG~~------~~~~~d~~~~~w~~ 327 (352)
++.++++||++||.. ++++||+++++|..
T Consensus 247 ~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 247 VCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred EEEECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 889999999999954 47889999999976
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=308.18 Aligned_cols=254 Identities=18% Similarity=0.302 Sum_probs=224.3
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT 147 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~ 147 (352)
.+.||++||.+. ...++.||+ .+++|..++++| .+|.+++++.++++||++||.+ ....+++++||+.+++
T Consensus 11 ~~~l~~~GG~~~--~~~~~~~d~--~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 11 HDYRIALFGGSQ--PQSCRYFNP--KDYSWTDIRCPF---EKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDS 81 (306)
T ss_dssp CCEEEEEECCSS--TTSEEEEET--TTTEEEECCCCS---CCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTE
T ss_pred cceEEEEeCCCC--CceEEEecC--CCCCEecCCCCC---cccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCe
Confidence 578999999754 456889999 999999999988 6899999999999999999987 3678999999999999
Q ss_pred eEecCCCCCcceeeeeEEECCEEEEEeCCCCC----CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCC
Q 045821 148 WTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT----HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAA 223 (352)
Q Consensus 148 W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~----~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~ 223 (352)
|..++++|.+|..|+++.++++||++||.+.. +++++||+.+++|+.++++|.++..++++.++++||++||....
T Consensus 82 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 82 WYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGN 161 (306)
T ss_dssp EEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESC
T ss_pred EEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCC
Confidence 99999999999999999999999999998632 88999999999999999999999999999999999999998765
Q ss_pred CC----ceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC----CeEEEEeCCCCceEEccCCCCCcCCC
Q 045821 224 TS----HVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG----TKLMMWQKESREWSPVGRLSTLLTRP 295 (352)
Q Consensus 224 ~~----~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~----~~v~~yd~~~~~W~~~~~~~~~~~~~ 295 (352)
.. ..++++||+.+++|+.+++.+..+..+.++..+++||++||..+ +++++||+++++|+.++.+|. .+.
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~ 239 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW--KGV 239 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC--CBS
T ss_pred CCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC--Ccc
Confidence 54 66899999999999999876655555666788999999999754 579999999999999998886 577
Q ss_pred CceEEEeCCEEEEEcCCc------eEEEEEcCCcccccceEEe
Q 045821 296 PCKLVAIGKTIFVIGKGC------SAVVIDVGNIGNIGGIMVS 332 (352)
Q Consensus 296 ~~~~~~~~~~i~v~gG~~------~~~~~d~~~~~w~~~~~~~ 332 (352)
.++++.++++||++||.. ++++||+++++|.....++
T Consensus 240 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 240 TVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR 282 (306)
T ss_dssp CCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE
T ss_pred ceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc
Confidence 888889999999999953 5778999999999876664
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=301.34 Aligned_cols=258 Identities=18% Similarity=0.290 Sum_probs=224.8
Q ss_pred CCCEEEEEEe-cCCC-CceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECC
Q 045821 67 DETWIYAFCR-DNKL-ERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDAS 144 (352)
Q Consensus 67 ~~~~l~~~gg-~~~~-~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 144 (352)
.++.||++|| .+.. ....++.||+ .+++|..++++| .+|.+++++..+++||++||.... ...+++++||+.
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~--~~~~W~~~~~~p---~~r~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~d~~ 86 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDP--KTQEWSFLPSIT---RKRRYVASVSLHDRIYVIGGYDGR-SRLSSVECLDYT 86 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEET--TTTEEEECCCCS---SCCBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcC--CCCeEEeCCCCC---hhhccccEEEECCEEEEEcCCCCC-ccCceEEEEECC
Confidence 4788999999 5422 2346899999 999999999887 678999999999999999998753 567899999999
Q ss_pred CCe---eEecCCCCCcceeeeeEEECCEEEEEeCCCCC---CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEc
Q 045821 145 MNT---WTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT---HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRC 218 (352)
Q Consensus 145 t~~---W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~---~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~G 218 (352)
+++ |+.++++|.+|..|+++.++++||++||.... +++++||+.+++|+.++++|.++..+++++++++||++|
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLG 166 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEEC
T ss_pred CCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEEC
Confidence 999 99999999999999999999999999998754 789999999999999999998888888999999999999
Q ss_pred cCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC----CeEEEEeCCCCceEEccCCCCCcCC
Q 045821 219 SASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG----TKLMMWQKESREWSPVGRLSTLLTR 294 (352)
Q Consensus 219 G~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~----~~v~~yd~~~~~W~~~~~~~~~~~~ 294 (352)
|.........+++||+.+++|+.+++.+..+..+.++..+++||++||..+ +++++||+++++|++++.+|. .+
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--~r 244 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTT--PR 244 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSS--CC
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCC--cc
Confidence 987666667999999999999999776555555566788999999999764 589999999999999998876 57
Q ss_pred CCceEEEeCCEEEEEcCCc------eEEEEEcCCcccccceEEe
Q 045821 295 PPCKLVAIGKTIFVIGKGC------SAVVIDVGNIGNIGGIMVS 332 (352)
Q Consensus 295 ~~~~~~~~~~~i~v~gG~~------~~~~~d~~~~~w~~~~~~~ 332 (352)
..++++.++++||++||.. .+++||+++++|.....++
T Consensus 245 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 245 CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp BSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE
T ss_pred cceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC
Confidence 7788888999999999953 4678999999998865554
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=298.32 Aligned_cols=249 Identities=16% Similarity=0.241 Sum_probs=212.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCC----C-CCCCCCeEEEEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCG----W-SEDATSEVYCYD 142 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~----~-~~~~~~~~~~~d 142 (352)
++.||++||. .++.||| .+++|.. +++|.+ .+|.+++++..+++||++||.. . .....+++++||
T Consensus 4 ~~~l~~~GG~------~~~~yd~--~~~~W~~-~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d 73 (315)
T 4asc_A 4 QDLIFMISEE------GAVAYDP--AANECYC-ASLSSQ-VPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFD 73 (315)
T ss_dssp EEEEEEEETT------EEEEEET--TTTEEEE-EECCCC-SCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEE
T ss_pred ceEEEEEcCC------ceEEECC--CCCeEec-CCCCCC-CCccceEEEEECCEEEEEcCcccCCCCCccccccceEEec
Confidence 4678999983 6889999 9999987 666532 5799999999999999999952 1 222345699999
Q ss_pred CCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCC----C--CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEE
Q 045821 143 ASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGD----T--HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYI 216 (352)
Q Consensus 143 ~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~----~--~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv 216 (352)
+.+++|+.++++|.+|..|+++.++++||++||... . +++++||+.+++|+.++++|.++..+++++++++||+
T Consensus 74 ~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 153 (315)
T 4asc_A 74 HLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYV 153 (315)
T ss_dssp TTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred CCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEE
Confidence 999999999999999999999999999999999642 2 8999999999999999999999999999999999999
Q ss_pred EccC-CCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC----CeEEEEeCCCCceEEccCCCCC
Q 045821 217 RCSA-SAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG----TKLMMWQKESREWSPVGRLSTL 291 (352)
Q Consensus 217 ~GG~-~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~----~~v~~yd~~~~~W~~~~~~~~~ 291 (352)
+||. .......++++||+.+++|+.+++.+..+..+.++..+++||++||..+ +++++||+++++|+.++.+|.
T Consensus 154 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~- 232 (315)
T 4asc_A 154 IGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ- 232 (315)
T ss_dssp ECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS-
T ss_pred EeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC-
Confidence 9998 4444456999999999999999876666656667788999999999765 479999999999999998876
Q ss_pred cCCCCceEEEeCCEEEEEcCCc---------------eEEEEEcCCcccccc
Q 045821 292 LTRPPCKLVAIGKTIFVIGKGC---------------SAVVIDVGNIGNIGG 328 (352)
Q Consensus 292 ~~~~~~~~~~~~~~i~v~gG~~---------------~~~~~d~~~~~w~~~ 328 (352)
.|..++++.++++||++||.. ++++||+++++|.+.
T Consensus 233 -~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 233 -ERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -CCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -cccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 577888889999999999963 356799999999764
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-40 Score=294.46 Aligned_cols=249 Identities=16% Similarity=0.283 Sum_probs=210.5
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCC-----CCCCCeEEEEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWS-----EDATSEVYCYD 142 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~~d 142 (352)
.+.||++||. ..+.||| .+++|... +++.+ .+|..++++..+++||++||.... ....+++++||
T Consensus 15 ~~~i~~~GG~------~~~~yd~--~~~~W~~~-~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d 84 (318)
T 2woz_A 15 KDLILLVNDT------AAVAYDP--MENECYLT-ALAEQ-IPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLD 84 (318)
T ss_dssp EEEEEEECSS------EEEEEET--TTTEEEEE-EECTT-SCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEE
T ss_pred cchhhhcccc------ceEEECC--CCCceecc-cCCcc-CCccceEEEEECCEEEEECCcccCccccCCCccccEEEEe
Confidence 6789999985 4789999 99999984 44422 578889999999999999995321 12234599999
Q ss_pred CCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCC--C---CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEE
Q 045821 143 ASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGD--T---HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIR 217 (352)
Q Consensus 143 ~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~--~---~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~ 217 (352)
+.+++|..++++|.+|..|+++.++++||++||... . +++++||+.+++|+.++++|.++..+++++++++||++
T Consensus 85 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 164 (318)
T 2woz_A 85 NVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCL 164 (318)
T ss_dssp TTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEE
T ss_pred CCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEE
Confidence 999999999999999999999999999999999752 2 88999999999999999999999999899999999999
Q ss_pred ccCCCC-CCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC----CeEEEEeCCCCceEEccCCCCCc
Q 045821 218 CSASAA-TSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG----TKLMMWQKESREWSPVGRLSTLL 292 (352)
Q Consensus 218 GG~~~~-~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~----~~v~~yd~~~~~W~~~~~~~~~~ 292 (352)
||.... ...+++++||+.+++|+.+++.+..+..+.+++.+++||++||..+ +++++||+++++|++++.+|.
T Consensus 165 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-- 242 (318)
T 2woz_A 165 GGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ-- 242 (318)
T ss_dssp CCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSS--
T ss_pred cCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCC--
Confidence 997533 3456899999999999999876655555666788999999999654 478999999999999998886
Q ss_pred CCCCceEEEeCCEEEEEcCC---------------ceEEEEEcCCcccccc
Q 045821 293 TRPPCKLVAIGKTIFVIGKG---------------CSAVVIDVGNIGNIGG 328 (352)
Q Consensus 293 ~~~~~~~~~~~~~i~v~gG~---------------~~~~~~d~~~~~w~~~ 328 (352)
.|..++++..+++||++||. .++++||+++++|.+.
T Consensus 243 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 243 ERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred cccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 57778889999999999995 2467899999999874
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.3e-40 Score=289.60 Aligned_cols=260 Identities=22% Similarity=0.369 Sum_probs=217.8
Q ss_pred ccchhhhhhhhhhcccccChhhHHHHhhCCCC--CCEEEEEEecCCCC-ceeEEEecCCCCCCCeeEeccCCCcccCCcc
Q 045821 36 RYHAVLKCVSSRWRGLLHSEEWCAYRRKHNLD--ETWIYAFCRDNKLE-RVCCYVLDPNSTRRSWKMIHELPARTLRRKG 112 (352)
Q Consensus 36 ~~~~~l~~v~k~W~~l~~s~~~~~~~~~~~~~--~~~l~~~gg~~~~~-~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~ 112 (352)
.+...+....+.|..+...| ..|..+++. ++.||++||.+... ...++.||+ .+++|+.++++| .+|..
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~--~~~~W~~~~~~p---~~r~~ 101 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELP---SRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDP--VKDQWTSVANMR---DRRST 101 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS---SCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEET--TTTEEEEECCCS---SCCBS
T ss_pred CcEEEEcCcCCcEeEcccCC---cccccceEEEECCEEEEEeCcCCCccccceEEECC--CCCceeeCCCCC---ccccc
Confidence 34556666778899885433 345555433 89999999975433 346889999 999999999988 68999
Q ss_pred eEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC-----CceEEEeC
Q 045821 113 MGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT-----HSWDVYDP 187 (352)
Q Consensus 113 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~-----~~v~~yd~ 187 (352)
|+++.++++||++||.+.. ...+++++||+.+++|+.++++|.+|..|+++.++++||++||.... +++++||+
T Consensus 102 ~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 180 (302)
T 2xn4_A 102 LGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNA 180 (302)
T ss_dssp CEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEET
T ss_pred eEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeC
Confidence 9999999999999998654 55789999999999999999999999999999999999999997542 78999999
Q ss_pred CCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecC
Q 045821 188 RTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQS 267 (352)
Q Consensus 188 ~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~ 267 (352)
.+++|+.++++|.++..+++++++++||++||.........+++||+.+++|+.++..+..+..+.++..+++||++||.
T Consensus 181 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 181 TTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGD 260 (302)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCc
Confidence 99999999999999988889999999999999876555668999999999999998766555555567889999999997
Q ss_pred CC----CeEEEEeCCCCceEEcc-CCCCCcCCCCceEEEeCCEE
Q 045821 268 SG----TKLMMWQKESREWSPVG-RLSTLLTRPPCKLVAIGKTI 306 (352)
Q Consensus 268 ~~----~~v~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~i 306 (352)
.+ +++++||+++++|+.++ .+|. .|..+++++++++|
T Consensus 261 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~--~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTDKWTVVSSCMST--GRSYAGVTVIDKRL 302 (302)
T ss_dssp CSSSBCCCEEEEETTTTEEEECSSCCSS--CCBSCEEEEEEC--
T ss_pred CCCcccccEEEEcCCCCeEEECCcccCc--ccccceEEEecccC
Confidence 64 57999999999999997 6765 57778888888765
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=287.46 Aligned_cols=257 Identities=18% Similarity=0.255 Sum_probs=216.8
Q ss_pred ccchhhhhhhhhhcccccChhhHHHHhhCCCC--CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcce
Q 045821 36 RYHAVLKCVSSRWRGLLHSEEWCAYRRKHNLD--ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGM 113 (352)
Q Consensus 36 ~~~~~l~~v~k~W~~l~~s~~~~~~~~~~~~~--~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~ 113 (352)
.+...+....++|..+...| ..|..+... ++.||++||.+......++.||+ .+++|..++++| .+|..+
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~--~~~~W~~~~~~p---~~r~~~ 95 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPF---EKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNV--VKDSWYSKLGPP---TPRDSL 95 (306)
T ss_dssp TSEEEEETTTTEEEECCCCS---CCCBSCEEEEETTEEEEECCBSSSBCCEEEEEET--TTTEEEEEECCS---SCCBSC
T ss_pred ceEEEecCCCCCEecCCCCC---cccceeEEEEECCEEEEEeCCCCCCcceEEEEeC--CCCeEEECCCCC---ccccce
Confidence 44566777788999885444 345555443 89999999986333456899999 999999999988 789999
Q ss_pred EEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC-------CceEEEe
Q 045821 114 GFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT-------HSWDVYD 186 (352)
Q Consensus 114 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~-------~~v~~yd 186 (352)
+++.++++||++||.+......+++++||+.+++|+.++++|.+|..|+++.++++||++||.... +++++||
T Consensus 96 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd 175 (306)
T 3ii7_A 96 AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYD 175 (306)
T ss_dssp EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEE
T ss_pred eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeC
Confidence 999999999999998744467899999999999999999999999999999999999999996432 7799999
Q ss_pred CCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEec
Q 045821 187 PRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQ 266 (352)
Q Consensus 187 ~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg 266 (352)
+.+++|+.+++++.++..++++.++++||++||.........+++||+.+++|+.++..+..+..+.++..+++||++||
T Consensus 176 ~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 176 PATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEEC
T ss_pred CCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeC
Confidence 99999999999999999999999999999999987655566899999999999999876655555666788999999999
Q ss_pred CCC----CeEEEEeCCCCceEEccCCCCCcCCCCceEEEe
Q 045821 267 SSG----TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI 302 (352)
Q Consensus 267 ~~~----~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 302 (352)
..+ +++++||+++++|+.++.+|. .+..++++.+
T Consensus 256 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~~~ 293 (306)
T 3ii7_A 256 FQGVGRLGHILEYNTETDKWVANSKVRA--FPVTSCLICV 293 (306)
T ss_dssp BCSSSBCCEEEEEETTTTEEEEEEEEEC--CSCTTCEEEE
T ss_pred cCCCeeeeeEEEEcCCCCeEEeCCCccc--ccceeEEEEE
Confidence 754 689999999999999998876 4555555544
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=289.00 Aligned_cols=264 Identities=17% Similarity=0.235 Sum_probs=217.2
Q ss_pred cchhhhhhhhhhcccccChhhHHHHhhCC--CCCCEEEEEEec-----CCCC--ceeEEEecCCCCCCCeeEeccCCCcc
Q 045821 37 YHAVLKCVSSRWRGLLHSEEWCAYRRKHN--LDETWIYAFCRD-----NKLE--RVCCYVLDPNSTRRSWKMIHELPART 107 (352)
Q Consensus 37 ~~~~l~~v~k~W~~l~~s~~~~~~~~~~~--~~~~~l~~~gg~-----~~~~--~~~~~~~d~~~~~~~w~~~~~~~~~~ 107 (352)
....+....++|.. ...|. +..|..++ ..++.||++||. .... ...++.||+ .+++|+.++++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p--- 86 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDH--LDSEWLGMPPLP--- 86 (315)
T ss_dssp EEEEEETTTTEEEE-EECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEET--TTTEEEECCCBS---
T ss_pred ceEEECCCCCeEec-CCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecC--CCCeEEECCCCC---
Confidence 34556667788975 22221 22344443 338999999995 1122 234889999 999999999988
Q ss_pred cCCcceEEEEECCEEEEEeCCC--CCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC----Cc
Q 045821 108 LRRKGMGFEVLGKNAYLLGGCG--WSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT----HS 181 (352)
Q Consensus 108 ~~~~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~----~~ 181 (352)
.+|..|+++.++++||++||.+ ......+++++||+.+++|+.++++|.+|..|+++.++++||++||.... ++
T Consensus 87 ~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 166 (315)
T 4asc_A 87 SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNK 166 (315)
T ss_dssp SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCC
T ss_pred cchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccce
Confidence 7899999999999999999964 22366889999999999999999999999999999999999999998432 89
Q ss_pred eEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEE
Q 045821 182 WDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDAL 261 (352)
Q Consensus 182 v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l 261 (352)
+++||+.+++|+.++++|.++..+++++++++||++||.........+++||+.+++|+.+++.+..+..+.++..+++|
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l 246 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTL 246 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEE
Confidence 99999999999999999999999999999999999999887666679999999999999998766566556667889999
Q ss_pred EEEecCCC-------------CeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcC
Q 045821 262 YVLDQSSG-------------TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGK 311 (352)
Q Consensus 262 ~~~gg~~~-------------~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG 311 (352)
|++||..+ +++++||+++++|+++. +. +|..+++++++++||++..
T Consensus 247 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~--~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 247 YAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL--RE--IAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE--SC--SSCCSSCEEEEEEECGGGS
T ss_pred EEECCccccCcCCccccccccCcEEEecCCCChhhhhc--cC--CcCccceEEeCCEEEEEEe
Confidence 99999632 47899999999999993 22 4777888889999999864
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5.5e-39 Score=285.17 Aligned_cols=257 Identities=21% Similarity=0.328 Sum_probs=216.2
Q ss_pred ccccchhhhhhhhhhcccccChhhHHHHhhCCCC--CCEEEEEEecC----CCC-ceeEEEecCCCCCCCeeEeccCCCc
Q 045821 34 PRRYHAVLKCVSSRWRGLLHSEEWCAYRRKHNLD--ETWIYAFCRDN----KLE-RVCCYVLDPNSTRRSWKMIHELPAR 106 (352)
Q Consensus 34 p~~~~~~l~~v~k~W~~l~~s~~~~~~~~~~~~~--~~~l~~~gg~~----~~~-~~~~~~~d~~~~~~~w~~~~~~~~~ 106 (352)
+..+...+....+.|..+...| ..|..+.+. ++.||++||.+ ... ...++.||+ .+++|+.++++|
T Consensus 37 ~~~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p-- 109 (308)
T 1zgk_A 37 SLSYLEAYNPSNGTWLRLADLQ---VPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNP--MTNQWSPCAPMS-- 109 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCS---SCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEET--TTTEEEECCCCS--
T ss_pred CcceEEEEcCCCCeEeECCCCC---cccccceEEEECCEEEEECCCcCCCCCCeecceEEEECC--CCCeEeECCCCC--
Confidence 3445677777889999984433 345555433 89999999972 211 245889999 999999999988
Q ss_pred ccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC---CceE
Q 045821 107 TLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT---HSWD 183 (352)
Q Consensus 107 ~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~---~~v~ 183 (352)
.+|..++++.++++||++||.... ...+++++||+.+++|+.++++|.+|..|+++.++++||++||.... ++++
T Consensus 110 -~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 187 (308)
T 1zgk_A 110 -VPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAE 187 (308)
T ss_dssp -SCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEE
T ss_pred -cCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEE
Confidence 689999999999999999997654 45789999999999999999999999999999999999999998754 8899
Q ss_pred EEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEE
Q 045821 184 VYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYV 263 (352)
Q Consensus 184 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~ 263 (352)
+||+.+++|+.++++|.++..+++++++++||++||........++++||+.+++|+.++..+..+....++..+++||+
T Consensus 188 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v 267 (308)
T 1zgk_A 188 CYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYV 267 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred EEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEE
Confidence 99999999999999999999898999999999999988666667999999999999999876655555566788999999
Q ss_pred EecCCC----CeEEEEeCCCCceEEccCCCCCcCCCCceEEE
Q 045821 264 LDQSSG----TKLMMWQKESREWSPVGRLSTLLTRPPCKLVA 301 (352)
Q Consensus 264 ~gg~~~----~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 301 (352)
+||..+ +++++||+++++|++++.+|. .|..+++++
T Consensus 268 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--~r~~~~~~~ 307 (308)
T 1zgk_A 268 LGGYDGHTFLDSVECYDPDTDTWSEVTRMTS--GRSGVGVAV 307 (308)
T ss_dssp ECCBCSSCBCCEEEEEETTTTEEEEEEECSS--CCBSCEEEE
T ss_pred EcCcCCCcccceEEEEcCCCCEEeecCCCCC--CcccceeEe
Confidence 999754 689999999999999999887 466666554
No 11
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-39 Score=287.09 Aligned_cols=262 Identities=16% Similarity=0.259 Sum_probs=214.3
Q ss_pred chhhhhhhhhhcccccChhhHHHHhhCC--CCCCEEEEEEecCC--CC-----ceeEEEecCCCCCCCeeEeccCCCccc
Q 045821 38 HAVLKCVSSRWRGLLHSEEWCAYRRKHN--LDETWIYAFCRDNK--LE-----RVCCYVLDPNSTRRSWKMIHELPARTL 108 (352)
Q Consensus 38 ~~~l~~v~k~W~~l~~s~~~~~~~~~~~--~~~~~l~~~gg~~~--~~-----~~~~~~~d~~~~~~~w~~~~~~~~~~~ 108 (352)
...+....++|... ..+ .+.+|..++ ..++.||++||... .. ...++.||+ .+++|.+++++| .
T Consensus 26 ~~~yd~~~~~W~~~-~~~-~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p---~ 98 (318)
T 2woz_A 26 AVAYDPMENECYLT-ALA-EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDN--VSSEWVGLPPLP---S 98 (318)
T ss_dssp EEEEETTTTEEEEE-EEC-TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEET--TTTEEEECSCBS---S
T ss_pred eEEECCCCCceecc-cCC-ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeC--CCCcEEECCCCC---c
Confidence 34566677889873 211 112333333 33899999999521 11 123889999 999999999888 6
Q ss_pred CCcceEEEEECCEEEEEeCCCC-CCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC----CceE
Q 045821 109 RRKGMGFEVLGKNAYLLGGCGW-SEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT----HSWD 183 (352)
Q Consensus 109 ~~~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~----~~v~ 183 (352)
+|..|+++.++++||++||... .....+++++||+.+++|+.++++|.+|..|+++.++++||++||.... ++++
T Consensus 99 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 178 (318)
T 2woz_A 99 ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVF 178 (318)
T ss_dssp CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEE
T ss_pred cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEE
Confidence 7999999999999999999753 2356789999999999999999999999999999999999999997432 8899
Q ss_pred EEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEE
Q 045821 184 VYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYV 263 (352)
Q Consensus 184 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~ 263 (352)
+||+.+++|+.++++|.++..+++++++++||++||.........+++||+.+++|+.++..+..+..+.++..+++||+
T Consensus 179 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v 258 (318)
T 2woz_A 179 IYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYA 258 (318)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEE
T ss_pred EEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEE
Confidence 99999999999999999998888999999999999987655567999999999999999876665555566788999999
Q ss_pred EecCCC-------------CeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc
Q 045821 264 LDQSSG-------------TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG 310 (352)
Q Consensus 264 ~gg~~~-------------~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g 310 (352)
+||... +++++||+++++|+++ +|. .+..++++.++++||++.
T Consensus 259 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~--~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 259 IGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKE--IRYASGASCLATRLNLFK 314 (318)
T ss_dssp ECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESC--CGGGTTCEEEEEEEEGGG
T ss_pred ECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--ccc--ccccccceeeCCEEEEEE
Confidence 999642 5799999999999999 443 466778888999999875
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.1e-38 Score=289.10 Aligned_cols=258 Identities=17% Similarity=0.245 Sum_probs=202.7
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCC-C---CCCCCCCeEEEEEC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGC-G---WSEDATSEVYCYDA 143 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~-~---~~~~~~~~~~~~d~ 143 (352)
++.||++||.+. ..++.||+...+++|..++++|. .+|.++++++++++||++||. + ......+++++||+
T Consensus 19 ~~~iyv~GG~~~---~~~~~~d~~~~~~~W~~~~~~p~--~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 19 NDTVYIGLGSAG---TAWYKLDTQAKDKKWTALAAFPG--GPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp TTEEEEECGGGT---TCEEEEETTSSSCCEEECCCCTT--CCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred CCEEEEEeCcCC---CeEEEEccccCCCCeeECCCCCC--CcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 899999999743 36889999222599999998873 368999999999999999997 2 22345789999999
Q ss_pred CCCeeEecCCCC-CcceeeeeEEECCEEEEEeCCCC-------------------------------------CCceEEE
Q 045821 144 SMNTWTDAAPMS-TARCYFPCGVLNQKIYCIGGLGD-------------------------------------THSWDVY 185 (352)
Q Consensus 144 ~t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~gG~~~-------------------------------------~~~v~~y 185 (352)
.+++|+.+++++ .+|..|+++.++++||++||... .+++++|
T Consensus 94 ~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 94 KTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp TTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred CCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 999999999998 89999999999999999999752 1689999
Q ss_pred eCCCCcEEEecCCCCcccc-eeEEEECCEEEEEccCCCCC-CceEEEEEeC--CCCceeecCCCCCC-CCCCc-EEEECC
Q 045821 186 DPRTNNWKLHTEPNIFTEI-EDSFVMDGKIYIRCSASAAT-SHVCALVYEP--STDSWLHADANMAS-GWRGP-AVVVDD 259 (352)
Q Consensus 186 d~~t~~W~~~~~~~~~~~~-~~~~~~~g~iyv~GG~~~~~-~~~~i~~yd~--~~~~W~~~~~~~~~-~~~~~-~~~~~~ 259 (352)
|+.+++|+.++++|.++.. +++++++++||++||..... ....+++||+ .+++|+.++..+.+ .+..+ ++..++
T Consensus 174 d~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 253 (357)
T 2uvk_A 174 DPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISND 253 (357)
T ss_dssp ETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETT
T ss_pred eCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECC
Confidence 9999999999988876655 77888999999999876432 2347888876 89999999764333 23333 678899
Q ss_pred EEEEEecCCC---------------------CeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCc-----
Q 045821 260 ALYVLDQSSG---------------------TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC----- 313 (352)
Q Consensus 260 ~l~~~gg~~~---------------------~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~----- 313 (352)
+||++||... .++++||+++++|++++.+|. .|..++++..+++|||+||.+
T Consensus 254 ~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~ 331 (357)
T 2uvk_A 254 SLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ--GRAYGVSLPWNNSLLIIGGETAGGKA 331 (357)
T ss_dssp EEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS--CCBSSEEEEETTEEEEEEEECGGGCE
T ss_pred EEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC--CcccceeEEeCCEEEEEeeeCCCCCE
Confidence 9999999531 368999999999999998887 466788888999999999953
Q ss_pred --eEEEEEcCCcccccceEEe
Q 045821 314 --SAVVIDVGNIGNIGGIMVS 332 (352)
Q Consensus 314 --~~~~~d~~~~~w~~~~~~~ 332 (352)
++++++.+.+.|.+....+
T Consensus 332 ~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 332 VTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEEEEEEC-CCSCEEEC---
T ss_pred eeeEEEEEEcCcEeEeeeccc
Confidence 3556899999998765543
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=280.63 Aligned_cols=257 Identities=21% Similarity=0.293 Sum_probs=216.7
Q ss_pred cccchhhhhhhhhhcccccChhhHHHHhhCCCC--CCEEEEEEecCCCC-ceeEEEecCCCCCCC---eeEeccCCCccc
Q 045821 35 RRYHAVLKCVSSRWRGLLHSEEWCAYRRKHNLD--ETWIYAFCRDNKLE-RVCCYVLDPNSTRRS---WKMIHELPARTL 108 (352)
Q Consensus 35 ~~~~~~l~~v~k~W~~l~~s~~~~~~~~~~~~~--~~~l~~~gg~~~~~-~~~~~~~d~~~~~~~---w~~~~~~~~~~~ 108 (352)
..+...+....+.|..+...|. .|..++.. ++.||++||.+... ...++.||+ .+++ |+.++++| .
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~---~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~--~~~~~~~W~~~~~~p---~ 101 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITR---KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDY--TADEDGVWYSVAPMN---V 101 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEET--TCCTTCCCEEECCCS---S
T ss_pred eeEEEEEcCCCCeEEeCCCCCh---hhccccEEEECCEEEEEcCCCCCccCceEEEEEC--CCCCCCeeEECCCCC---C
Confidence 3445667777889998864443 45445433 89999999975333 346899999 9999 99999988 6
Q ss_pred CCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC---CceEEE
Q 045821 109 RRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT---HSWDVY 185 (352)
Q Consensus 109 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~---~~v~~y 185 (352)
+|..++++.++++||++||.... ...+++++||+.+++|+.++++|.+|..|+++.++++||++||.+.. +++++|
T Consensus 102 ~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 102 RRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp CCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred CccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEE
Confidence 89999999999999999998764 45789999999999999999999999999999999999999998754 899999
Q ss_pred eCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEe
Q 045821 186 DPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLD 265 (352)
Q Consensus 186 d~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~g 265 (352)
|+.+++|+.++++|.++..++++.++++||++||.........+++||+.+++|+.++..+..+..+.++..+++||++|
T Consensus 181 d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 260 (301)
T 2vpj_A 181 DPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIA 260 (301)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred eCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEc
Confidence 99999999999999999888999999999999998866656799999999999999987665555556678899999999
Q ss_pred cCCC----CeEEEEeCCCCceEEccCCCCCcCCCCceEEEe
Q 045821 266 QSSG----TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI 302 (352)
Q Consensus 266 g~~~----~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 302 (352)
|..+ +++++||+++++|+.++.+|. .|..++++.+
T Consensus 261 G~~~~~~~~~v~~yd~~~~~W~~~~~~~~--~r~~~~~~~~ 299 (301)
T 2vpj_A 261 GYDGNSLLSSIECYDPIIDSWEVVTSMGT--QRCDAGVCVL 299 (301)
T ss_dssp CBCSSSBEEEEEEEETTTTEEEEEEEEEE--EEESCEEEEE
T ss_pred CcCCCcccccEEEEcCCCCeEEEcCCCCc--ccccceEEEe
Confidence 9765 579999999999999998886 4666665554
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=6.1e-35 Score=264.41 Aligned_cols=224 Identities=17% Similarity=0.212 Sum_probs=182.1
Q ss_pred EeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECC--CCeeEecCCCC-CcceeeeeEEECCEEEEEeC
Q 045821 99 MIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDAS--MNTWTDAAPMS-TARCYFPCGVLNQKIYCIGG 175 (352)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~--t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~gG 175 (352)
.++++| .+|.+++++.++++||++||... +++++||+. +++|+.++++| .+|..|++++++++|||+||
T Consensus 2 ~l~~lP---~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG 73 (357)
T 2uvk_A 2 VLPETP---VPFKSGTGAIDNDTVYIGLGSAG-----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGG 73 (357)
T ss_dssp CSCCCS---SCCCSCEEEEETTEEEEECGGGT-----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECC
T ss_pred CCCCCC---ccccceEEEEECCEEEEEeCcCC-----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcC
Confidence 356676 67888888889999999999653 479999998 48999999999 89999999999999999999
Q ss_pred C-C---CC----CceEEEeCCCCcEEEecCCC-CcccceeEEEECCEEEEEccCCCCC----------------------
Q 045821 176 L-G---DT----HSWDVYDPRTNNWKLHTEPN-IFTEIEDSFVMDGKIYIRCSASAAT---------------------- 224 (352)
Q Consensus 176 ~-~---~~----~~v~~yd~~t~~W~~~~~~~-~~~~~~~~~~~~g~iyv~GG~~~~~---------------------- 224 (352)
. . .. +++++||+.+++|+++++++ .++..+++++++++||++||.....
T Consensus 74 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
T 2uvk_A 74 IGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153 (357)
T ss_dssp EEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhh
Confidence 8 2 11 89999999999999999887 6777777888999999999876421
Q ss_pred ------------CceEEEEEeCCCCceeecCCCCCCCCC-CcEEEECCEEEEEecCCC-----CeEEEEeC--CCCceEE
Q 045821 225 ------------SHVCALVYEPSTDSWLHADANMASGWR-GPAVVVDDALYVLDQSSG-----TKLMMWQK--ESREWSP 284 (352)
Q Consensus 225 ------------~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~l~~~gg~~~-----~~v~~yd~--~~~~W~~ 284 (352)
..+.+++||+.+++|+.+++.+..++. +.+++.+++||++||..+ .++++||+ ++++|++
T Consensus 154 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~ 233 (357)
T 2uvk_A 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNK 233 (357)
T ss_dssp HHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEE
T ss_pred hhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEe
Confidence 246899999999999999765555555 556788999999999632 57889976 8999999
Q ss_pred ccCCCCCcCCCCceEEEeCCEEEEEcCCc-----------------------eEEEEEcCCcccccceE
Q 045821 285 VGRLSTLLTRPPCKLVAIGKTIFVIGKGC-----------------------SAVVIDVGNIGNIGGIM 330 (352)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~i~v~gG~~-----------------------~~~~~d~~~~~w~~~~~ 330 (352)
++.++.+..+..++++..+++|||+||.. .+++||+++++|.+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 234 LAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp CCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred cCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 99887655566777899999999999942 46789999999987543
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.7e-34 Score=282.12 Aligned_cols=245 Identities=15% Similarity=0.184 Sum_probs=196.2
Q ss_pred CCCEEEEEEecCCCCceeEEEecCCCCCCCeeEec-cCC--CcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEE
Q 045821 67 DETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIH-ELP--ARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCY 141 (352)
Q Consensus 67 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~-~~~--~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 141 (352)
.++.||++||.+......++.||+ .+++|..++ ++| ..+.+|.+|+++++ +++||++||.+......+++++|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~--~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSI--HYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEE--CSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEEC--CCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 488999999975533456899999 999999998 632 12278999999999 99999999987764578899999
Q ss_pred ECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC---CCCcccceeEEEEC---CEE
Q 045821 142 DASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE---PNIFTEIEDSFVMD---GKI 214 (352)
Q Consensus 142 d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~---~~~~~~~~~~~~~~---g~i 214 (352)
|+.+++|+.++++|.+|..|+++.+ +++|||+||.....++++||+.+++|+.+++ +|.++..+++++++ ++|
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 9999999999999999999999997 9999999998654589999999999999986 67777777777776 899
Q ss_pred EEEccCCCC--CCceEEEEEeCCCCc------eeecCCCC-CCCCCCcEEEEC-CEEEEEecCCC-------CeEEEEeC
Q 045821 215 YIRCSASAA--TSHVCALVYEPSTDS------WLHADANM-ASGWRGPAVVVD-DALYVLDQSSG-------TKLMMWQK 277 (352)
Q Consensus 215 yv~GG~~~~--~~~~~i~~yd~~~~~------W~~~~~~~-~~~~~~~~~~~~-~~l~~~gg~~~-------~~v~~yd~ 277 (352)
|++||.... ...+++++||+.+++ |+.+...+ ..+..+.+++.+ ++||++||..+ +++++||+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 999998543 345699999999999 88886533 334444456777 99999999642 57999999
Q ss_pred CCCceEEccCCCCC------cCCCCceEEEeCC-EEEEEcCCce
Q 045821 278 ESREWSPVGRLSTL------LTRPPCKLVAIGK-TIFVIGKGCS 314 (352)
Q Consensus 278 ~~~~W~~~~~~~~~------~~~~~~~~~~~~~-~i~v~gG~~~ 314 (352)
.+++|+.+. +|.. ..+.+++++.+++ +|||+||...
T Consensus 634 ~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~ 676 (695)
T 2zwa_A 634 LSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGAT 676 (695)
T ss_dssp TTTEEEECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEEE
T ss_pred CCCeEEEee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCcc
Confidence 999999654 3221 1345566666665 9999999643
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.8e-31 Score=260.77 Aligned_cols=212 Identities=14% Similarity=0.206 Sum_probs=178.7
Q ss_pred cCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecC-C-----CCCcceeeeeEEE--CCEEEEEeCCCCC
Q 045821 108 LRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAA-P-----MSTARCYFPCGVL--NQKIYCIGGLGDT 179 (352)
Q Consensus 108 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~-~-----~~~~r~~~~~~~~--~~~iyv~gG~~~~ 179 (352)
..|.+++ +++++.||++||... ...+++++||+.+++|..++ + +|.+|..|+++.+ +++||++||....
T Consensus 387 ~rr~g~~-~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~ 463 (695)
T 2zwa_A 387 NRKFGDV-DVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP 463 (695)
T ss_dssp CCBSCEE-EECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST
T ss_pred CCceeEE-EEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC
Confidence 4565554 448999999999866 56789999999999999988 5 7889999999999 9999999998653
Q ss_pred ----CceEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCceeecCC---CCCCCCC
Q 045821 180 ----HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSWLHADA---NMASGWR 251 (352)
Q Consensus 180 ----~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~---~~~~~~~ 251 (352)
+++++||+.+++|+.++++|.++..++++++ +++||++||..... ++++||+.+++|+.++. .+..+..
T Consensus 464 ~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~ 540 (695)
T 2zwa_A 464 HQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLV 540 (695)
T ss_dssp TCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCB
T ss_pred CCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccc
Confidence 8899999999999999999999999988886 99999999987544 89999999999999975 3334444
Q ss_pred CcEEEEC---CEEEEEecCCC------CeEEEEeCCCCc------eEEccCCCCCcCCCCceEEEeC-CEEEEEcCC---
Q 045821 252 GPAVVVD---DALYVLDQSSG------TKLMMWQKESRE------WSPVGRLSTLLTRPPCKLVAIG-KTIFVIGKG--- 312 (352)
Q Consensus 252 ~~~~~~~---~~l~~~gg~~~------~~v~~yd~~~~~------W~~~~~~~~~~~~~~~~~~~~~-~~i~v~gG~--- 312 (352)
+.+++++ ++||++||... +++++||+.+++ |+.+..+|. ..|..++++.++ ++|||+||.
T Consensus 541 ~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~-~~R~~~~~~~~~~~~iyv~GG~~~~ 619 (695)
T 2zwa_A 541 SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL-FQRYGSQIKYITPRKLLIVGGTSPS 619 (695)
T ss_dssp SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG-GCCBSCEEEEEETTEEEEECCBCSS
T ss_pred eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC-CCcccceEEEeCCCEEEEECCccCC
Confidence 4445655 89999999732 589999999999 899887643 367788888888 999999994
Q ss_pred ------ceEEEEEcCCcccc
Q 045821 313 ------CSAVVIDVGNIGNI 326 (352)
Q Consensus 313 ------~~~~~~d~~~~~w~ 326 (352)
..+++||+++++|.
T Consensus 620 ~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 620 GLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CCCCTTTSEEEEETTTTEEE
T ss_pred CCCCCCCeEEEEECCCCeEE
Confidence 35788999999998
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=1.2e-31 Score=261.44 Aligned_cols=276 Identities=13% Similarity=0.151 Sum_probs=203.9
Q ss_pred chhhhhhhhhhcccccChhhHHHHhhCCCC--CCEEEEEEecCCC-------CceeEEEecCCCCCCCeeEeccCCCccc
Q 045821 38 HAVLKCVSSRWRGLLHSEEWCAYRRKHNLD--ETWIYAFCRDNKL-------ERVCCYVLDPNSTRRSWKMIHELPARTL 108 (352)
Q Consensus 38 ~~~l~~v~k~W~~l~~s~~~~~~~~~~~~~--~~~l~~~gg~~~~-------~~~~~~~~d~~~~~~~w~~~~~~~~~~~ 108 (352)
...+.....+|..+...|. .....+.. ++.||++||.+.. .....+.||+ .+++|..++.++ .
T Consensus 168 ~~~~dp~~~~W~~~~~~P~---~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~--~t~~w~~~~~~~---~ 239 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI---VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDP--STGIVSDRTVTV---T 239 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS---CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECT--TTCCBCCCEEEE---C
T ss_pred cccCCCCCCeeeeeccCCC---CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeC--CCCcEEeCcccC---C
Confidence 3344455678988766554 11222222 8899999996432 1236789999 999999998887 3
Q ss_pred CCcce--EEEE-ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCC-CCC---C
Q 045821 109 RRKGM--GFEV-LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGL-GDT---H 180 (352)
Q Consensus 109 ~~~~~--~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~-~~~---~ 180 (352)
++..+ +++. .+++||++||... .++++||+.+++|..+++|+.+|..|+++.+ +++||++||. +.. +
T Consensus 240 ~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 240 KHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp SCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCC
T ss_pred CCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccc
Confidence 34333 3443 5899999999754 3799999999999999999999999999999 9999999994 322 8
Q ss_pred ceEEEeCCCCcEEEec-----CCCCcccceeEEEECCEEEEEccCCCCC----CceEEEEEeCCCCceeecCCCCC----
Q 045821 181 SWDVYDPRTNNWKLHT-----EPNIFTEIEDSFVMDGKIYIRCSASAAT----SHVCALVYEPSTDSWLHADANMA---- 247 (352)
Q Consensus 181 ~v~~yd~~t~~W~~~~-----~~~~~~~~~~~~~~~g~iyv~GG~~~~~----~~~~i~~yd~~~~~W~~~~~~~~---- 247 (352)
++++||+.+++|+.++ +++..+ ...++..++++|++||.++.. ....++.||+.+++|........
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~-~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTAD-KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCC-TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred cceEeCCCCCcceeCCCcccccccccc-ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 8999999999999984 333332 234556799999999876432 24489999999999875422111
Q ss_pred ---CCCCCcEEE---ECCEEEEEecCCC-------C---eEEEEeCCCCceEEcc--CCCCCcCCCCceEEEe-CCEEEE
Q 045821 248 ---SGWRGPAVV---VDDALYVLDQSSG-------T---KLMMWQKESREWSPVG--RLSTLLTRPPCKLVAI-GKTIFV 308 (352)
Q Consensus 248 ---~~~~~~~~~---~~~~l~~~gg~~~-------~---~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~-~~~i~v 308 (352)
.+..+.+++ .+++||++||... + .+++||+++++|.++. .+|. .|..++++.+ +++||+
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~--~R~~~~~~~l~~g~i~v 471 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF--ARTFHTSVVLPDGSTFI 471 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS--CCBSCEEEECTTSCEEE
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC--CcccCCeEECCCCCEEE
Confidence 123344443 4899999999532 2 6899999999999986 6765 5666776666 999999
Q ss_pred EcCC------------ceEEEEEcCCcccccce
Q 045821 309 IGKG------------CSAVVIDVGNIGNIGGI 329 (352)
Q Consensus 309 ~gG~------------~~~~~~d~~~~~w~~~~ 329 (352)
+||. ...++||+++++|....
T Consensus 472 ~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 472 TGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp ECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred ECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 9994 24678999999997643
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=1.5e-29 Score=246.74 Aligned_cols=261 Identities=13% Similarity=0.063 Sum_probs=192.1
Q ss_pred chhhhhhhhhhcccccChhhHHHHhhCC-----CCCCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcc
Q 045821 38 HAVLKCVSSRWRGLLHSEEWCAYRRKHN-----LDETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKG 112 (352)
Q Consensus 38 ~~~l~~v~k~W~~l~~s~~~~~~~~~~~-----~~~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~ 112 (352)
...+....+.|+.+...+ ..|..++ ..++.||++||.+.. .+++||+ .+++|.++++|+ .+|.+
T Consensus 221 ~~~yd~~t~~w~~~~~~~---~~~~~~~~~~~~~~~g~lyv~GG~~~~---~v~~yd~--~t~~W~~~~~~~---~~R~~ 289 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTV---TKHDMFCPGISMDGNGQIVVTGGNDAK---KTSLYDS--SSDSWIPGPDMQ---VARGY 289 (656)
T ss_dssp EEEECTTTCCBCCCEEEE---CSCCCSSCEEEECTTSCEEEECSSSTT---CEEEEEG--GGTEEEECCCCS---SCCSS
T ss_pred EEEEeCCCCcEEeCcccC---CCCCCccccccCCCCCCEEEeCCCCCC---ceEEecC--cCCceeECCCCC---ccccc
Confidence 344556677888874333 2333333 238999999997432 6888999 999999999988 68999
Q ss_pred eEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecC-----CCCCcceeeeeEEECCEEEEEeCCCCC-------
Q 045821 113 MGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAA-----PMSTARCYFPCGVLNQKIYCIGGLGDT------- 179 (352)
Q Consensus 113 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~-----~~~~~r~~~~~~~~~~~iyv~gG~~~~------- 179 (352)
++++.+ +++||++||........+++++||+.+++|+.++ +++.++. ++++..++++|++||.+..
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~ 368 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPS 368 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSS
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCc
Confidence 999999 9999999995443356789999999999999984 4444443 3455578999999987532
Q ss_pred CceEEEeCCCCcEEEecCCCC-------cccceeEEE---ECCEEEEEccCCCC---CCce---EEEEEeCCCCceeecC
Q 045821 180 HSWDVYDPRTNNWKLHTEPNI-------FTEIEDSFV---MDGKIYIRCSASAA---TSHV---CALVYEPSTDSWLHAD 243 (352)
Q Consensus 180 ~~v~~yd~~t~~W~~~~~~~~-------~~~~~~~~~---~~g~iyv~GG~~~~---~~~~---~i~~yd~~~~~W~~~~ 243 (352)
..++.||+.++.|........ .+..+.++. .+++||++||.... .... .+++||+.+++|..+.
T Consensus 369 ~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 369 TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred cceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 789999999999875432211 122333332 48999999996431 1222 7889999999999886
Q ss_pred --CCCCCCCCCcEEEE-CCEEEEEecCCC----------CeEEEEeCCCCceEEccCCCCCcCCCCceEEEe--CCEEEE
Q 045821 244 --ANMASGWRGPAVVV-DDALYVLDQSSG----------TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI--GKTIFV 308 (352)
Q Consensus 244 --~~~~~~~~~~~~~~-~~~l~~~gg~~~----------~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v 308 (352)
..+..+..+.++++ +++||++||... .++++||+++++|+.++.++. .|..++++.+ +++||+
T Consensus 449 ~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~--~R~~hs~a~ll~dg~v~v 526 (656)
T 1k3i_A 449 SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI--VRVYHSISLLLPDGRVFN 526 (656)
T ss_dssp TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS--CCCTTEEEEECTTSCEEE
T ss_pred cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC--ccccccHhhcCCCcEEEe
Confidence 43333334444566 999999999541 579999999999999998876 4666666666 999999
Q ss_pred EcCC
Q 045821 309 IGKG 312 (352)
Q Consensus 309 ~gG~ 312 (352)
+||.
T Consensus 527 ~GG~ 530 (656)
T 1k3i_A 527 GGGG 530 (656)
T ss_dssp EECC
T ss_pred cCCC
Confidence 9995
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.94 E-value=3.9e-07 Score=83.94 Aligned_cols=276 Identities=16% Similarity=0.129 Sum_probs=144.0
Q ss_pred CCCccCCCcHHHHHHhhccCccccchhhhhhhhhhcccccChhhHHHHh-------------------------------
Q 045821 14 VVPLISGLPDDIALFCLARVPRRYHAVLKCVSSRWRGLLHSEEWCAYRR------------------------------- 62 (352)
Q Consensus 14 ~~~~~~~lp~dl~~~il~r~p~~~~~~l~~v~k~W~~l~~s~~~~~~~~------------------------------- 62 (352)
....+..||+|++..||++|+..++.++..|||+|+.++.++.+-+...
T Consensus 15 ~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~ 94 (445)
T 2ovr_B 15 QRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYI 94 (445)
T ss_dssp CCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHH
T ss_pred cCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHh
Confidence 4556889999999999999999999999999999987765542211000
Q ss_pred ------------hC-------CCC---------CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceE
Q 045821 63 ------------KH-------NLD---------ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMG 114 (352)
Q Consensus 63 ------------~~-------~~~---------~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~ 114 (352)
.. +.. ++..++.|+. .+ .+.++|. .+..- +..+.. ......
T Consensus 95 ~~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~--dg--~i~vwd~--~~~~~--~~~~~~---h~~~v~ 163 (445)
T 2ovr_B 95 RQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSD--DN--TLKVWSA--VTGKC--LRTLVG---HTGGVW 163 (445)
T ss_dssp HHHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEET--TS--CEEEEET--TTCCE--EEECCC---CSSCEE
T ss_pred hhhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEEC--CC--cEEEEEC--CCCcE--EEEEcC---CCCCEE
Confidence 00 000 1112222221 12 2334465 44432 222221 111122
Q ss_pred EEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEE
Q 045821 115 FEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKL 194 (352)
Q Consensus 115 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~ 194 (352)
.....+.+++.|+.+ ..+.+||..+++-...-.... ..-....+++..++.|+.+ ..+.+||..+.+-..
T Consensus 164 ~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~~~l~s~s~d--g~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 164 SSQMRDNIIISGSTD------RTLKVWNAETGECIHTLYGHT--STVRCMHLHEKRVVSGSRD--ATLRVWDIETGQCLH 233 (445)
T ss_dssp EEEEETTEEEEEETT------SCEEEEETTTTEEEEEECCCS--SCEEEEEEETTEEEEEETT--SEEEEEESSSCCEEE
T ss_pred EEEecCCEEEEEeCC------CeEEEEECCcCcEEEEECCCC--CcEEEEEecCCEEEEEeCC--CEEEEEECCCCcEEE
Confidence 233334555666543 458889998876332211111 1112222344455666655 678999998775332
Q ss_pred ecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEE
Q 045821 195 HTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMM 274 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~ 274 (352)
.- ........++..++..++.|+.++ .+..||..+.+-...-. .+......+..++..++.|+.++ .+.+
T Consensus 234 ~~--~~~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~d~-~i~i 303 (445)
T 2ovr_B 234 VL--MGHVAAVRCVQYDGRRVVSGAYDF-----MVKVWDPETETCLHTLQ--GHTNRVYSLQFDGIHVVSGSLDT-SIRV 303 (445)
T ss_dssp EE--ECCSSCEEEEEECSSCEEEEETTS-----CEEEEEGGGTEEEEEEC--CCSSCEEEEEECSSEEEEEETTS-CEEE
T ss_pred EE--cCCcccEEEEEECCCEEEEEcCCC-----EEEEEECCCCcEeEEec--CCCCceEEEEECCCEEEEEeCCC-eEEE
Confidence 21 111112223444777777766553 47778876654322111 11111123445777777777766 8999
Q ss_pred EeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 275 WQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 275 yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
||..+++-... +... .....++...++ .++.|+.+ .+.+||+.+..
T Consensus 304 ~d~~~~~~~~~--~~~~-~~~v~~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 350 (445)
T 2ovr_B 304 WDVETGNCIHT--LTGH-QSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQ 350 (445)
T ss_dssp EETTTCCEEEE--ECCC-CSCEEEEEEETT-EEEEEETTSCEEEEETTTCC
T ss_pred EECCCCCEEEE--EcCC-cccEEEEEEeCC-EEEEEeCCCeEEEEECCCCc
Confidence 99987654322 1110 111223333344 44555444 56689987643
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.92 E-value=3.1e-07 Score=84.94 Aligned_cols=40 Identities=23% Similarity=0.268 Sum_probs=36.7
Q ss_pred CCccCCCcHHHHHHhhccCccccchhhhhhhhhhcccccC
Q 045821 15 VPLISGLPDDIALFCLARVPRRYHAVLKCVSSRWRGLLHS 54 (352)
Q Consensus 15 ~~~~~~lp~dl~~~il~r~p~~~~~~l~~v~k~W~~l~~s 54 (352)
...+..||+|++.+||+.|+.+++.++..|||+|+.++.+
T Consensus 12 ~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 12 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred cCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 4467789999999999999999999999999999998876
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.78 E-value=5.5e-07 Score=82.74 Aligned_cols=277 Identities=14% Similarity=0.051 Sum_probs=146.0
Q ss_pred CCccCCCcHH----HHHHhhccCccccchhhhhhhhhhcccccChhhHH-------------------------------
Q 045821 15 VPLISGLPDD----IALFCLARVPRRYHAVLKCVSSRWRGLLHSEEWCA------------------------------- 59 (352)
Q Consensus 15 ~~~~~~lp~d----l~~~il~r~p~~~~~~l~~v~k~W~~l~~s~~~~~------------------------------- 59 (352)
...+..||+| ++..||+.|+..++.++..|||+|+.++.++.+=+
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 87 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 87 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC----
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCC
Confidence 3466789999 99999999999999999999999987654332100
Q ss_pred ------------------------HHh--hCC-----------CC---------CCEEEEEEecCCCCceeEEEecCCCC
Q 045821 60 ------------------------YRR--KHN-----------LD---------ETWIYAFCRDNKLERVCCYVLDPNST 93 (352)
Q Consensus 60 ------------------------~~~--~~~-----------~~---------~~~l~~~gg~~~~~~~~~~~~d~~~~ 93 (352)
... ..+ .. ++..++.|+. .+ .+.++|. .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~--dg--~i~iwd~--~ 161 (435)
T 1p22_A 88 PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLR--DN--TIKIWDK--N 161 (435)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEES--SS--CEEEEES--S
T ss_pred CCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeC--CC--eEEEEeC--C
Confidence 000 000 00 1223333332 12 2444566 5
Q ss_pred CCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEE
Q 045821 94 RRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCI 173 (352)
Q Consensus 94 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~ 173 (352)
+..-... +. ...........++.+++.|+.+ ..+.+||..+++-...- ......-....+++..++.
T Consensus 162 ~~~~~~~--~~---~h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~--~~h~~~v~~l~~~~~~l~s 228 (435)
T 1p22_A 162 TLECKRI--LT---GHTGSVLCLQYDERVIITGSSD------STVRVWDVNTGEMLNTL--IHHCEAVLHLRFNNGMMVT 228 (435)
T ss_dssp SCCEEEE--EC---CCSSCEEEEECCSSEEEEEETT------SCEEEEESSSCCEEEEE--CCCCSCEEEEECCTTEEEE
T ss_pred CCeEEEE--Ec---CCCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCcEEEEE--cCCCCcEEEEEEcCCEEEE
Confidence 5443222 21 1112223344467777777643 45888998877532211 1111112222334556666
Q ss_pred eCCCCCCceEEEeCCCCcEEEe-cCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCC
Q 045821 174 GGLGDTHSWDVYDPRTNNWKLH-TEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRG 252 (352)
Q Consensus 174 gG~~~~~~v~~yd~~t~~W~~~-~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~ 252 (352)
|+.+ ..+.+||..+..-... ...........++..+++..+.|+.++ .+..||..+.+-...-. ......
T Consensus 229 ~s~d--g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~--~~~~~v 299 (435)
T 1p22_A 229 CSKD--RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR-----TIKVWNTSTCEFVRTLN--GHKRGI 299 (435)
T ss_dssp EETT--SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS-----EEEEEETTTCCEEEEEE--CCSSCE
T ss_pred eeCC--CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEECCcCcEEEEEc--CCCCcE
Confidence 6655 6788999887642211 111111112223344666666665542 58888987765432211 111111
Q ss_pred cEEEECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCce-EEEEEcCCcc
Q 045821 253 PAVVVDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCS-AVVIDVGNIG 324 (352)
Q Consensus 253 ~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~-~~~~d~~~~~ 324 (352)
..+..++.+++.|+.++ .+.+||..+++-... +.. ......++ ..+++.++.|+.+. +.+||+....
T Consensus 300 ~~~~~~~~~l~~g~~dg-~i~iwd~~~~~~~~~--~~~-h~~~v~~~-~~~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 300 ACLQYRDRLVVSGSSDN-TIRLWDIECGACLRV--LEG-HEELVRCI-RFDNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EEEEEETTEEEEEETTS-CEEEEETTTCCEEEE--ECC-CSSCEEEE-ECCSSEEEEEETTSCEEEEEHHHHT
T ss_pred EEEEeCCCEEEEEeCCC-eEEEEECCCCCEEEE--EeC-CcCcEEEE-EecCCEEEEEeCCCcEEEEECCCCC
Confidence 23445677777777666 899999987653322 111 01111223 33666666666554 6689976543
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.57 E-value=5.8e-05 Score=66.55 Aligned_cols=231 Identities=10% Similarity=0.049 Sum_probs=136.1
Q ss_pred EEEEEecC-CCCceeEEEecCCCCCCCeeEeccC--CCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe
Q 045821 71 IYAFCRDN-KLERVCCYVLDPNSTRRSWKMIHEL--PARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT 147 (352)
Q Consensus 71 l~~~gg~~-~~~~~~~~~~d~~~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~ 147 (352)
+|++...+ ..+.-.+.++|+ .++++...-.. ...........++..++++|+... ....+.++|+.+.+
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~--~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~------~~~~v~viD~~t~~ 75 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDP--ATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN------NSHVIFAIDINTFK 75 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEET--TTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG------GGTEEEEEETTTCC
T ss_pred EEEEecCCCCCCCceEEEEEC--CCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc------CCCEEEEEECcccE
Confidence 66664332 222345667799 88876542110 000122333556667999999864 24679999999887
Q ss_pred e-EecCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEE-EecCCCCc----ccceeEEEECCEEEEEccC
Q 045821 148 W-TDAAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWK-LHTEPNIF----TEIEDSFVMDGKIYIRCSA 220 (352)
Q Consensus 148 W-~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~-~~~~~~~~----~~~~~~~~~~g~iyv~GG~ 220 (352)
- ..++....|+ .++. -++++|+....+ ..+.++|+.+.+-. .++ .... ..-...+..++++|+..-.
T Consensus 76 ~~~~i~~~~~p~---~i~~~~~g~lyv~~~~~--~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~~~~~lyv~~~~ 149 (328)
T 3dsm_A 76 EVGRITGFTSPR---YIHFLSDEKAYVTQIWD--YRIFIINPKTYEITGYIE-CPDMDMESGSTEQMVQYGKYVYVNCWS 149 (328)
T ss_dssp EEEEEECCSSEE---EEEEEETTEEEEEEBSC--SEEEEEETTTTEEEEEEE-CTTCCTTTCBCCCEEEETTEEEEEECT
T ss_pred EEEEcCCCCCCc---EEEEeCCCeEEEEECCC--CeEEEEECCCCeEEEEEE-cCCccccCCCcceEEEECCEEEEEcCC
Confidence 5 4454333332 2333 578999988543 78999999998754 233 1110 0222344478999998421
Q ss_pred CCCCCceEEEEEeCCCCceee-cCCCCCCCCCCcEEEECCEEEEEecCC---------CCeEEEEeCCCCceEEccCCCC
Q 045821 221 SAATSHVCALVYEPSTDSWLH-ADANMASGWRGPAVVVDDALYVLDQSS---------GTKLMMWQKESREWSPVGRLST 290 (352)
Q Consensus 221 ~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~l~~~gg~~---------~~~v~~yd~~~~~W~~~~~~~~ 290 (352)
....+.++|+.+++... ++.. . .-....+.-+|++|+..... ...++++|+++++....-.++.
T Consensus 150 ----~~~~v~viD~~t~~~~~~i~~g-~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~ 223 (328)
T 3dsm_A 150 ----YQNRILKIDTETDKVVDELTIG-I-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL 223 (328)
T ss_dssp ----TCCEEEEEETTTTEEEEEEECS-S-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT
T ss_pred ----CCCEEEEEECCCCeEEEEEEcC-C-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC
Confidence 12369999999887643 2221 1 11223344578988875432 1489999999887653323332
Q ss_pred CcCCCCceEEEe--CCEEEEEcCCceEEEEEcCCccc
Q 045821 291 LLTRPPCKLVAI--GKTIFVIGKGCSAVVIDVGNIGN 325 (352)
Q Consensus 291 ~~~~~~~~~~~~--~~~i~v~gG~~~~~~~d~~~~~w 325 (352)
. .....++.- ++.+|+..+ .++++|+++...
T Consensus 224 g--~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 224 G--DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp T--CCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred C--CCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 1 122344443 677888876 788899987654
No 23
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.50 E-value=4.2e-08 Score=61.60 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=37.6
Q ss_pred CCCccCCCcHHHHHHhhccCccccchhhhhhhhhhcccccChhh
Q 045821 14 VVPLISGLPDDIALFCLARVPRRYHAVLKCVSSRWRGLLHSEEW 57 (352)
Q Consensus 14 ~~~~~~~lp~dl~~~il~r~p~~~~~~l~~v~k~W~~l~~s~~~ 57 (352)
+...+..||+|++.+|++++|..++.+++.|||+|+.++.++.+
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 45578899999999999999999999999999999999887754
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.46 E-value=6.3e-05 Score=62.77 Aligned_cols=188 Identities=14% Similarity=-0.024 Sum_probs=117.4
Q ss_pred CcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCC
Q 045821 110 RKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRT 189 (352)
Q Consensus 110 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t 189 (352)
..-+++...++.+|.-.|..+ .+.+.++|+.+++-..--+++......+.+..++++|+....+ +.+++||+.|
T Consensus 21 ~ftqGL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~--~~v~v~D~~t 94 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN--HEGFVYDLAT 94 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--SEEEEEETTT
T ss_pred cccccEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC--CEEEEEECCc
Confidence 344577778999999988644 4789999999998654444555445567777899999997654 7899999988
Q ss_pred CcEE-EecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee-ecCCC---CCCCCCCcEEEECCEEEEE
Q 045821 190 NNWK-LHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL-HADAN---MASGWRGPAVVVDDALYVL 264 (352)
Q Consensus 190 ~~W~-~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~-~~~~~---~~~~~~~~~~~~~~~l~~~ 264 (352)
-+-. +++ .....-+.+.-+++||+.-| ...+..+|+.+.+-. .+... .+...-.-....+++||+-
T Consensus 95 l~~~~ti~---~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 95 LTPRARFR---YPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TEEEEEEE---CSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcEEEEEe---CCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 6532 233 22233344545668888854 236999999987643 22221 1111111123458999844
Q ss_pred ecCCCCeEEEEeCCCCceE---EccCCCCCcCC-------CCceEEE--eCCEEEEEcCCc
Q 045821 265 DQSSGTKLMMWQKESREWS---PVGRLSTLLTR-------PPCKLVA--IGKTIFVIGKGC 313 (352)
Q Consensus 265 gg~~~~~v~~yd~~~~~W~---~~~~~~~~~~~-------~~~~~~~--~~~~i~v~gG~~ 313 (352)
- ...+.|.+.|+.+++-. .++.+.+...+ ..-+++. -++.+||-|-..
T Consensus 166 v-w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 166 V-WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp E-TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred E-CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 4 33459999999998743 44433221111 1123333 257899999654
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.44 E-value=0.00018 Score=63.39 Aligned_cols=226 Identities=9% Similarity=-0.034 Sum_probs=128.1
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCe-eEeccCCCcccCCcceEEEE-ECCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSW-KMIHELPARTLRRKGMGFEV-LGKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w-~~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++++|+... ..-.+.++|+ .+.+. ..++... ....++. .++++|+.... ...+.++|+.+
T Consensus 53 ~~~lyv~~~----~~~~v~viD~--~t~~~~~~i~~~~------~p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t 114 (328)
T 3dsm_A 53 DGIGWIVVN----NSHVIFAIDI--NTFKEVGRITGFT------SPRYIHFLSDEKAYVTQIW------DYRIFIINPKT 114 (328)
T ss_dssp TTEEEEEEG----GGTEEEEEET--TTCCEEEEEECCS------SEEEEEEEETTEEEEEEBS------CSEEEEEETTT
T ss_pred CCEEEEEEc----CCCEEEEEEC--cccEEEEEcCCCC------CCcEEEEeCCCeEEEEECC------CCeEEEEECCC
Confidence 677888753 2335677799 87765 3443222 1223444 67899998632 46799999999
Q ss_pred CeeEe-cCCCC---CcceeeeeEEECCEEEEEeC-CCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccC
Q 045821 146 NTWTD-AAPMS---TARCYFPCGVLNQKIYCIGG-LGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSA 220 (352)
Q Consensus 146 ~~W~~-~~~~~---~~r~~~~~~~~~~~iyv~gG-~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~ 220 (352)
++-.. ++.-. .......++..++++|+... .+ ..+.++|+.+++....-+..... ...++.-+|++|+....
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~--~~v~viD~~t~~~~~~i~~g~~p-~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQ--NRILKIDTETDKVVDELTIGIQP-TSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTC--CEEEEEETTTTEEEEEEECSSCB-CCCEECTTSEEEEEBCC
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCC--CEEEEEECCCCeEEEEEEcCCCc-cceEEcCCCCEEEEECC
Confidence 87542 22111 00022334446889999853 22 78999999998754322121111 11223346899988532
Q ss_pred CCCCC-----ceEEEEEeCCCCceee-cCCCCCCCCCCcEEEE---CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCC
Q 045821 221 SAATS-----HVCALVYEPSTDSWLH-ADANMASGWRGPAVVV---DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTL 291 (352)
Q Consensus 221 ~~~~~-----~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~---~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~ 291 (352)
..... ...+.++|+.+.+... +..+.. .....+.+ ++.||+..+ .++++|+++++.......+..
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g--~~p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~~~~ 265 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG--DWPSEVQLNGTRDTLYWINN----DIWRMPVEADRVPVRPFLEFR 265 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT--CCCEEEEECTTSCEEEEESS----SEEEEETTCSSCCSSCSBCCC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCC--CCceeEEEecCCCEEEEEcc----EEEEEECCCCceeeeeeecCC
Confidence 21111 2579999999887653 221111 11122322 456777655 799999998776322212210
Q ss_pred cCCCCceEEE--eCCEEEEEc-----CCceEEEEEcC
Q 045821 292 LTRPPCKLVA--IGKTIFVIG-----KGCSAVVIDVG 321 (352)
Q Consensus 292 ~~~~~~~~~~--~~~~i~v~g-----G~~~~~~~d~~ 321 (352)
.....+++. .++.||+.. +...+.+||++
T Consensus 266 -~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 266 -DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred -CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 122234444 378899986 33457789987
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.33 E-value=0.0015 Score=58.28 Aligned_cols=204 Identities=16% Similarity=0.173 Sum_probs=115.8
Q ss_pred eEEEecCCCCCCC--eeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCcc-
Q 045821 84 CCYVLDPNSTRRS--WKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTAR- 158 (352)
Q Consensus 84 ~~~~~d~~~~~~~--w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~r- 158 (352)
.++.||+ .+++ |..-...+.. ..+.....+..++.+|+. . ....+..+|+.+++ |+.-...+...
T Consensus 154 ~l~~~d~--~tG~~~W~~~~~~~~~-~~~~~~~~~~~~~~v~~g-~------~~g~l~~~d~~tG~~~w~~~~~~~~~~~ 223 (376)
T 3q7m_A 154 QLQALNE--ADGAVKWTVNLDMPSL-SLRGESAPTTAFGAAVVG-G------DNGRVSAVLMEQGQMIWQQRISQATGST 223 (376)
T ss_dssp EEEEEET--TTCCEEEEEECCC------CCCCCCEEETTEEEEC-C------TTTEEEEEETTTCCEEEEEECCC-----
T ss_pred eEEEEEC--CCCcEEEEEeCCCCce-eecCCCCcEEECCEEEEE-c------CCCEEEEEECCCCcEEEEEecccCCCCc
Confidence 4667787 5554 7654432210 111122334457777763 2 13468999998775 76543222111
Q ss_pred -------eeeeeEEECCEEEEEeCCCCCCceEEEeCCCC--cEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEE
Q 045821 159 -------CYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTN--NWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCA 229 (352)
Q Consensus 159 -------~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i 229 (352)
.....+..++.+|+.+.. ..+..+|+.++ .|+.-. . .....+..++.||+.... ..+
T Consensus 224 ~~~~~~~~~~~p~~~~~~v~~~~~~---g~l~~~d~~tG~~~w~~~~--~---~~~~~~~~~~~l~~~~~~------g~l 289 (376)
T 3q7m_A 224 EIDRLSDVDTTPVVVNGVVFALAYN---GNLTALDLRSGQIMWKREL--G---SVNDFIVDGNRIYLVDQN------DRV 289 (376)
T ss_dssp ------CCCCCCEEETTEEEEECTT---SCEEEEETTTCCEEEEECC--C---CEEEEEEETTEEEEEETT------CCE
T ss_pred ccccccccCCCcEEECCEEEEEecC---cEEEEEECCCCcEEeeccC--C---CCCCceEECCEEEEEcCC------CeE
Confidence 223445568899887532 57899999877 476532 1 122345668999997432 248
Q ss_pred EEEeCCCCc--eeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCc--eEEccCCCCCcCCCCceEEEeCCE
Q 045821 230 LVYEPSTDS--WLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESRE--WSPVGRLSTLLTRPPCKLVAIGKT 305 (352)
Q Consensus 230 ~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~ 305 (352)
.++|+.+++ |+.-.. ........+..++.||+... .+ .++.+|+++++ |+.- ++. .......+..++.
T Consensus 290 ~~~d~~tG~~~w~~~~~--~~~~~~~~~~~~~~l~v~~~-~g-~l~~~d~~tG~~~~~~~--~~~--~~~~~~~~~~~~~ 361 (376)
T 3q7m_A 290 MALTIDGGVTLWTQSDL--LHRLLTSPVLYNGNLVVGDS-EG-YLHWINVEDGRFVAQQK--VDS--SGFQTEPVAADGK 361 (376)
T ss_dssp EEEETTTCCEEEEECTT--TTSCCCCCEEETTEEEEECT-TS-EEEEEETTTCCEEEEEE--CCT--TCBCSCCEEETTE
T ss_pred EEEECCCCcEEEeeccc--CCCcccCCEEECCEEEEEeC-CC-eEEEEECCCCcEEEEEe--cCC--CcceeCCEEECCE
Confidence 899987765 765321 11222233556888887643 33 79999998876 5432 211 1112334556899
Q ss_pred EEEEcCCceEEEEE
Q 045821 306 IFVIGKGCSAVVID 319 (352)
Q Consensus 306 i~v~gG~~~~~~~d 319 (352)
||+......++.||
T Consensus 362 l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 362 LLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEBTTSCEEEEE
T ss_pred EEEEeCCCEEEEEe
Confidence 99887555566665
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.20 E-value=0.00018 Score=60.50 Aligned_cols=186 Identities=11% Similarity=-0.049 Sum_probs=112.8
Q ss_pred ceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCc
Q 045821 112 GMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 112 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
..++...++.+|+..|..+ .+.+.++|+.+++-..--+++...+..+++..+++||+....+ +.+.+||+.|.+
T Consensus 45 tqGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~--~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN--GLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--SEEEEEETTTCC
T ss_pred cceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC--CEEEEEECccCc
Confidence 3556666899999988543 3678999999998544334443334455777899999997654 789999999876
Q ss_pred EE-EecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee-ecCCCC-CCCCCC--cEEEECCEEEEEec
Q 045821 192 WK-LHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL-HADANM-ASGWRG--PAVVVDDALYVLDQ 266 (352)
Q Consensus 192 W~-~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~-~~~~~~-~~~~~~--~~~~~~~~l~~~gg 266 (352)
-. +++ ......+.+.-+++||+.-| ...++.+|+.+.+-. .++... ...... -....+|+||+--
T Consensus 119 ~~~ti~---~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~- 188 (262)
T 3nol_A 119 QVRSFN---YDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV- 188 (262)
T ss_dssp EEEEEE---CSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred EEEEEE---CCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE-
Confidence 33 333 22233344444567888743 246999999986643 332211 111111 1234589988543
Q ss_pred CCCCeEEEEeCCCCceE---EccCCCCCc------CCCCceEEE--eCCEEEEEcCCc
Q 045821 267 SSGTKLMMWQKESREWS---PVGRLSTLL------TRPPCKLVA--IGKTIFVIGKGC 313 (352)
Q Consensus 267 ~~~~~v~~yd~~~~~W~---~~~~~~~~~------~~~~~~~~~--~~~~i~v~gG~~ 313 (352)
...+.|.+.|+++++-. .++.+.+.. ....-+++. -.+.+||.|...
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 44459999999998754 333232110 011123333 357899999665
No 28
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.20 E-value=5.4e-07 Score=77.21 Aligned_cols=48 Identities=23% Similarity=0.408 Sum_probs=42.9
Q ss_pred CCccCCCcHHHHHHhhccCccccch-hhhhhhhhhcccccChhhHHHHh
Q 045821 15 VPLISGLPDDIALFCLARVPRRYHA-VLKCVSSRWRGLLHSEEWCAYRR 62 (352)
Q Consensus 15 ~~~~~~lp~dl~~~il~r~p~~~~~-~l~~v~k~W~~l~~s~~~~~~~~ 62 (352)
+..+..||+|++++||++||.+++. ++++|||+|+.|+.++.|-+.+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~ 96 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKC 96 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHH
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHh
Confidence 4567899999999999999999999 99999999999999998755443
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.13 E-value=0.0022 Score=57.19 Aligned_cols=189 Identities=12% Similarity=0.106 Sum_probs=109.5
Q ss_pred EEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCC-------CcceeeeeEEECCEEEEEeCCCCCCceEE
Q 045821 114 GFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMS-------TARCYFPCGVLNQKIYCIGGLGDTHSWDV 184 (352)
Q Consensus 114 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~-------~~r~~~~~~~~~~~iyv~gG~~~~~~v~~ 184 (352)
+.++.++.||+... ...+++||..+++ |+.-.... ........+..++.+|+.... ..+.+
T Consensus 48 ~p~v~~~~v~~~~~-------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~---g~l~a 117 (376)
T 3q7m_A 48 HPALADNVVYAADR-------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK---AQVYA 117 (376)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT---SEEEE
T ss_pred ccEEECCEEEEEcC-------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC---CEEEE
Confidence 44667899998743 3478999998775 76543211 122334455668899986542 57899
Q ss_pred EeCCCCc--EEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc--eeecCCCCCC--CCCCcEEEEC
Q 045821 185 YDPRTNN--WKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHADANMAS--GWRGPAVVVD 258 (352)
Q Consensus 185 yd~~t~~--W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~--~~~~~~~~~~ 258 (352)
+|..+++ |+.-... ......+..++.+|+... . ..++.||..+++ |+.-...... ......+..+
T Consensus 118 ~d~~tG~~~W~~~~~~---~~~~~p~~~~~~v~v~~~-~-----g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~ 188 (376)
T 3q7m_A 118 LNTSDGTVAWQTKVAG---EALSRPVVSDGLVLIHTS-N-----GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAF 188 (376)
T ss_dssp EETTTCCEEEEEECSS---CCCSCCEEETTEEEEECT-T-----SEEEEEETTTCCEEEEEECCC-----CCCCCCEEET
T ss_pred EECCCCCEEEEEeCCC---ceEcCCEEECCEEEEEcC-C-----CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEEC
Confidence 9998774 7653321 112233556888888632 1 268999987765 8765332211 1112234557
Q ss_pred CEEEEEecCCCCeEEEEeCCCCc--eEEccCCCCCc------CCCCceEEEeCCEEEEEcCCceEEEEEcCCc
Q 045821 259 DALYVLDQSSGTKLMMWQKESRE--WSPVGRLSTLL------TRPPCKLVAIGKTIFVIGKGCSAVVIDVGNI 323 (352)
Q Consensus 259 ~~l~~~gg~~~~~v~~yd~~~~~--W~~~~~~~~~~------~~~~~~~~~~~~~i~v~gG~~~~~~~d~~~~ 323 (352)
+.+|+ |...+ .++.||+.+++ |+.-...+... .......+..++.||+.+.......+|+++.
T Consensus 189 ~~v~~-g~~~g-~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 189 GAAVV-GGDNG-RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp TEEEE-CCTTT-EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTC
T ss_pred CEEEE-EcCCC-EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCC
Confidence 77665 33333 89999997654 76543222100 0112334456788888765556777887543
No 30
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.11 E-value=0.0033 Score=53.58 Aligned_cols=233 Identities=9% Similarity=-0.006 Sum_probs=120.6
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCccc-CCcceEEEE--ECCEEEEEeCCCCCCCCCCeEEEEECC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTL-RRKGMGFEV--LGKNAYLLGGCGWSEDATSEVYCYDAS 144 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~-~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~ 144 (352)
++.+|+.... .-.+.+||+ .......+........ ...-..++. -++.+|+.+.. ....+.+||+.
T Consensus 40 ~g~l~v~~~~----~~~i~~~d~--~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~ 108 (286)
T 1q7f_A 40 QNDIIVADTN----NHRIQIFDK--EGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQY 108 (286)
T ss_dssp TCCEEEEEGG----GTEEEEECT--TSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTT
T ss_pred CCCEEEEECC----CCEEEEECC--CCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCC
Confidence 5667776432 234667788 6444444432110001 112233444 26789988631 13568889965
Q ss_pred CCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-ECCEEEEEccCCC
Q 045821 145 MNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDGKIYIRCSASA 222 (352)
Q Consensus 145 t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g~iyv~GG~~~ 222 (352)
...-..+..... .....++.. ++++|+..... ..+.+||+.......+........-...+. -+|++|+.....
T Consensus 109 g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~- 184 (286)
T 1q7f_A 109 GQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKV--MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA- 184 (286)
T ss_dssp SCEEEEECTTTC-SCEEEEEECTTSCEEEEETTT--TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG-
T ss_pred CcEEEEecCccC-CCceEEEEeCCCCEEEEECCC--CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC-
Confidence 544444432111 111233332 57888876533 678999987665444432111111122222 268999985322
Q ss_pred CCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE
Q 045821 223 ATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV 300 (352)
Q Consensus 223 ~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 300 (352)
..+.+||+.......+.... .......+. -++.||+.+...+..|.+||++.+.-..+..-.. .....+++
T Consensus 185 ----~~i~~~~~~g~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~ 257 (286)
T 1q7f_A 185 ----HCVKVFNYEGQYLRQIGGEG-ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK--HAQCFDVA 257 (286)
T ss_dssp ----TEEEEEETTCCEEEEESCTT-TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC--CSCEEEEE
T ss_pred ----CEEEEEcCCCCEEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC--CCcceeEE
Confidence 36889998665444443211 001112233 3678888765443389999987665444432111 11112333
Q ss_pred E-eCCEEEEEcCCceEEEEEcCC
Q 045821 301 A-IGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 301 ~-~~~~i~v~gG~~~~~~~d~~~ 322 (352)
. .++++|+......+.+|+...
T Consensus 258 ~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 258 LMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EETTTEEEEEETTTEEEEEECSC
T ss_pred ECCCCcEEEECCCCeEEEEEccc
Confidence 3 477899887655677787654
No 31
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.02 E-value=0.0048 Score=54.00 Aligned_cols=235 Identities=9% Similarity=-0.007 Sum_probs=119.4
Q ss_pred CCEEEEEEecCC--CCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECC
Q 045821 68 ETWIYAFCRDNK--LERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDAS 144 (352)
Q Consensus 68 ~~~l~~~gg~~~--~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~ 144 (352)
++.+|+...... .....++.+|+ .+......-+... ......... ++.+|+.+.. ...++++|+.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~--~~~~~~~~~~~~~----~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~ 119 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDP--VTLEVTQAIHNDL----KPFGATINNTTQTLWFGNTV------NSAVTAIDAK 119 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECT--TTCCEEEEEEESS----CCCSEEEETTTTEEEEEETT------TTEEEEEETT
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcC--CCCeEEEEEecCC----CcceEEECCCCCEEEEEecC------CCEEEEEeCC
Confidence 567877653211 12446788898 7766543333221 111222222 3458877642 3578999999
Q ss_pred CCeeEecCCCCC--------cceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECC-E
Q 045821 145 MNTWTDAAPMST--------ARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDG-K 213 (352)
Q Consensus 145 t~~W~~~~~~~~--------~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g-~ 213 (352)
+++-...-..+. +.....++.. ++.+|+.+.... ..+.+||+.+.+-...-+.........+..-+| .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-ceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 886422211111 1112223332 356887763221 679999998876433222111111222333344 5
Q ss_pred EEEEccCCCCCCceEEEEEeCCCCceee-cCCCCCCCCCC---cEEEEC-CEEEEEecCCCCeEEEEeCCCCceEEccCC
Q 045821 214 IYIRCSASAATSHVCALVYEPSTDSWLH-ADANMASGWRG---PAVVVD-DALYVLDQSSGTKLMMWQKESREWSPVGRL 288 (352)
Q Consensus 214 iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~---~~~~~~-~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~ 288 (352)
+|+... . ..+..+|..+.+-.. +.......... .++.-+ +.+|+.+... ..+.+||+.+++....-..
T Consensus 199 l~~~~~-~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 199 LYTTNA-D-----GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA-AEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EEEECT-T-----SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS-SEEEEEETTTCCEEEEEEC
T ss_pred EEEEcC-C-----CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC-CEEEEEECCCCcEEEEEEc
Confidence 676632 2 367889988775432 22111111111 122324 4566665433 4899999988775443333
Q ss_pred CCCcCCCCceEEEeCCEEEEEcC-CceEEEEEcCCccc
Q 045821 289 STLLTRPPCKLVAIGKTIFVIGK-GCSAVVIDVGNIGN 325 (352)
Q Consensus 289 ~~~~~~~~~~~~~~~~~i~v~gG-~~~~~~~d~~~~~w 325 (352)
+.. ...++...++.+|+.+. ...+.++|+++...
T Consensus 272 ~~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 272 PES---LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp SSC---CCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCC---ceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 321 22223233556888774 45677899876553
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.01 E-value=0.0014 Score=54.69 Aligned_cols=162 Identities=12% Similarity=-0.045 Sum_probs=106.0
Q ss_pred eeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc
Q 045821 159 CYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS 238 (352)
Q Consensus 159 ~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~ 238 (352)
+.+.+...++.+|+..|....+.+.++|+.|++=..--+++......+.+..+++||++.... ..+++||+.+.+
T Consensus 22 ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~~v~v~D~~tl~ 96 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----HEGFVYDLATLT 96 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTTE
T ss_pred ccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----CEEEEEECCcCc
Confidence 445677778999999997666889999999997655444555555566778899999995332 479999998766
Q ss_pred ee-ecCCCCCCCCCCcEEEE-CCEEEEEecCCCCeEEEEeCCCCceE-Ecc--CCCCCcCCCCceEEEeCCEEEEEc-CC
Q 045821 239 WL-HADANMASGWRGPAVVV-DDALYVLDQSSGTKLMMWQKESREWS-PVG--RLSTLLTRPPCKLVAIGKTIFVIG-KG 312 (352)
Q Consensus 239 W~-~~~~~~~~~~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~~~~W~-~~~--~~~~~~~~~~~~~~~~~~~i~v~g-G~ 312 (352)
-. .++.. ..+.+++. ++.||+..| + +.++.+|+++.+-. .+. .-+.. ....-.+...+++||+-- ..
T Consensus 97 ~~~ti~~~----~~Gwglt~dg~~L~vSdg-s-~~l~~iDp~t~~~~~~I~V~~~g~~-~~~lNeLe~~~G~lyanvw~s 169 (243)
T 3mbr_X 97 PRARFRYP----GEGWALTSDDSHLYMSDG-T-AVIRKLDPDTLQQVGSIKVTAGGRP-LDNLNELEWVNGELLANVWLT 169 (243)
T ss_dssp EEEEEECS----SCCCEEEECSSCEEEECS-S-SEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEETTEEEEEETTT
T ss_pred EEEEEeCC----CCceEEeeCCCEEEEECC-C-CeEEEEeCCCCeEEEEEEEccCCcc-cccceeeEEeCCEEEEEECCC
Confidence 43 33332 13344444 556888776 3 38999999986543 222 11111 111123444589999754 56
Q ss_pred ceEEEEEcCCcccccceEEe
Q 045821 313 CSAVVIDVGNIGNIGGIMVS 332 (352)
Q Consensus 313 ~~~~~~d~~~~~w~~~~~~~ 332 (352)
+.+.++|+++..-.+...+.
T Consensus 170 ~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TEEEEECTTTCBEEEEEECG
T ss_pred CeEEEEECCCCCEEEEEECC
Confidence 67888999987755544444
No 33
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.00 E-value=0.0054 Score=52.26 Aligned_cols=225 Identities=6% Similarity=-0.072 Sum_probs=118.7
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.+|+.... .-.++.||+ . +....+. ++. ....-..++.. ++.+|+.... ...+.++|+ ++
T Consensus 67 ~g~l~v~~~~----~~~i~~~~~--~-g~~~~~~-~~~--~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g 129 (299)
T 2z2n_A 67 DGEVWFTENA----ANKIGRITK--K-GIIKEYT-LPN--PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DG 129 (299)
T ss_dssp TSCEEEEETT----TTEEEEECT--T-SCEEEEE-CSS--TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TC
T ss_pred CCCEEEeCCC----CCeEEEECC--C-CcEEEEe-CCC--cCCCceeeEECCCCCEEEEecC------CceEEEECC-CC
Confidence 5667776321 224677788 5 4554443 221 11122333333 5778887532 356888998 66
Q ss_pred eeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-ECCEEEEEccCCCCC
Q 045821 147 TWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDGKIYIRCSASAAT 224 (352)
Q Consensus 147 ~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g~iyv~GG~~~~~ 224 (352)
+...+...........++.. ++++|+..... ..+.+||+ +++...+............+. -+|+||+.....
T Consensus 130 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--- 203 (299)
T 2z2n_A 130 KIREYELPNKGSYPSFITLGSDNALWFTENQN--NAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIG--- 203 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTT--TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT---
T ss_pred CEEEecCCCCCCCCceEEEcCCCCEEEEeCCC--CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCC---
Confidence 55543221111122233333 57888865322 57899999 777766532211111112222 257898874221
Q ss_pred CceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEe
Q 045821 225 SHVCALVYEPSTDSWLHADANMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI 302 (352)
Q Consensus 225 ~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 302 (352)
..+.+||+ +++...+..+. .......+.. ++.||+..... ..+.+||+ +++..... ++.. .....+++..
T Consensus 204 --~~i~~~~~-~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~d~-~g~~~~~~-~~~~-~~~~~~i~~~ 275 (299)
T 2z2n_A 204 --NKIGRITT-SGEITEFKIPT-PNARPHAITAGAGIDLWFTEWGA-NKIGRLTS-NNIIEEYP-IQIK-SAEPHGICFD 275 (299)
T ss_dssp --TEEEEECT-TCCEEEEECSS-TTCCEEEEEECSTTCEEEEETTT-TEEEEEET-TTEEEEEE-CSSS-SCCEEEEEEC
T ss_pred --ceEEEECC-CCcEEEEECCC-CCCCceeEEECCCCCEEEeccCC-ceEEEECC-CCceEEEe-CCCC-CCccceEEec
Confidence 26889999 77776543211 1111112333 56788765333 38999999 45555443 1211 1122334446
Q ss_pred CCEEEEEcCCceEEEEEcCCc
Q 045821 303 GKTIFVIGKGCSAVVIDVGNI 323 (352)
Q Consensus 303 ~~~i~v~gG~~~~~~~d~~~~ 323 (352)
++.||+.........||+++.
T Consensus 276 ~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 276 GETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp SSCEEEEETTTEEEEEEEC--
T ss_pred CCCEEEEecCCcEEEEEcCcc
Confidence 778888865567778888764
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.00 E-value=0.00017 Score=64.65 Aligned_cols=220 Identities=15% Similarity=0.174 Sum_probs=113.3
Q ss_pred CEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-C-CEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 69 TWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-G-KNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 69 ~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
+++|+.++. .-.+.++|. .++.....-.... .-.+++.. + ..+|+.++. ...+.+||..++
T Consensus 2 ~~l~vs~~~----d~~v~v~d~--~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~ 64 (391)
T 1l0q_A 2 TFAYIANSE----SDNISVIDV--TSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAH------SNDVSIIDTATN 64 (391)
T ss_dssp EEEEEEETT----TTEEEEEET--TTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGG------GTEEEEEETTTT
T ss_pred CEEEEEcCC----CCEEEEEEC--CCCeEEEEeecCC-----CcceEEECCCCCEEEEECCC------CCeEEEEECCCC
Confidence 456766653 124556687 6665433322221 11223332 3 357777643 357899999888
Q ss_pred eeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CC-EEEEEccCCC
Q 045821 147 TWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DG-KIYIRCSASA 222 (352)
Q Consensus 147 ~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g-~iyv~GG~~~ 222 (352)
+....-.... .-..++.. +..+|+.+..+ ..+.+||..+++-...-... ......+.. ++ .+|+.++..
T Consensus 65 ~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~- 137 (391)
T 1l0q_A 65 NVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD- 137 (391)
T ss_dssp EEEEEEECSS--SEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT-
T ss_pred eEEEEEECCC--CccceEECCCCCEEEEEECCC--CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC-
Confidence 7543322222 11222222 34577766543 67999999988654332211 111222222 44 577775433
Q ss_pred CCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECC-EEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceE
Q 045821 223 ATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDD-ALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKL 299 (352)
Q Consensus 223 ~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~-~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 299 (352)
..+..||..+.+....-... .....+. -++ .||+.++..+ .+.+||+.+++....-.... ...++
T Consensus 138 ----~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~~~----~~~~~ 205 (391)
T 1l0q_A 138 ----KTVSVINTVTKAVINTVSVG---RSPKGIAVTPDGTKVYVANFDSM-SISVIDTVTNSVIDTVKVEA----APSGI 205 (391)
T ss_dssp ----TEEEEEETTTTEEEEEEECC---SSEEEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEECSS----EEEEE
T ss_pred ----CEEEEEECCCCcEEEEEecC---CCcceEEECCCCCEEEEEeCCCC-EEEEEECCCCeEEEEEecCC----Cccce
Confidence 26889999887654432111 1111222 234 5666665544 89999998876543322211 11122
Q ss_pred EE--eCCEEEEEc---CCceEEEEEcCCcc
Q 045821 300 VA--IGKTIFVIG---KGCSAVVIDVGNIG 324 (352)
Q Consensus 300 ~~--~~~~i~v~g---G~~~~~~~d~~~~~ 324 (352)
+. .+..|++.+ +...+.+||+++..
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 21 244566665 34567788887643
No 35
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.99 E-value=0.0056 Score=52.16 Aligned_cols=221 Identities=8% Similarity=-0.044 Sum_probs=116.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.+|+... ..-.++.||+ . +.+..+.... ....-+.++.- ++.+|+.... ...+.+||+. +
T Consensus 72 ~g~l~v~~~----~~~~v~~~d~--~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g 134 (300)
T 2qc5_A 72 LGDIWFTEN----GANKIGKLSK--K-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-G 134 (300)
T ss_dssp TSCEEEEET----TTTEEEEECT--T-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-S
T ss_pred CCCEEEEec----CCCeEEEECC--C-CCeEEecCCC---CCCCCccceECCCCCEEEEccC------CCeEEEECCC-C
Confidence 566777632 1235677898 6 6665443211 11122333333 5778887531 3468889987 5
Q ss_pred eeEecCCCCCc-ceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCCC
Q 045821 147 TWTDAAPMSTA-RCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASAA 223 (352)
Q Consensus 147 ~W~~~~~~~~~-r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~~ 223 (352)
+..... ++.. ......+.- ++++|+..... ..+.+||+ +++...+..+.........+.. +|+||+.....
T Consensus 135 ~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~--~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-- 208 (300)
T 2qc5_A 135 TIYEYD-LPNKGSYPAFITLGSDNALWFTENQN--NSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMG-- 208 (300)
T ss_dssp CEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT--TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT--
T ss_pred CEEEcc-CCCCCCCceeEEECCCCCEEEEecCC--CeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCC--
Confidence 554332 1211 122233332 56788876322 57899999 6777665421111111222222 67899874221
Q ss_pred CCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE
Q 045821 224 TSHVCALVYEPSTDSWLHADANMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA 301 (352)
Q Consensus 224 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 301 (352)
..+.+||+ +++......+. .......+.. ++.||+..... ..+.+||+ +++..... ++.. .....+++.
T Consensus 209 ---~~i~~~~~-~g~~~~~~~~~-~~~~~~~i~~d~~g~l~v~~~~~-~~i~~~~~-~g~~~~~~-~~~~-~~~~~~i~~ 279 (300)
T 2qc5_A 209 ---NKIGRITT-TGEISEYDIPT-PNARPHAITAGKNSEIWFTEWGA-NQIGRITN-DNTIQEYQ-LQTE-NAEPHGITF 279 (300)
T ss_dssp ---TEEEEECT-TCCEEEEECSS-TTCCEEEEEECSTTCEEEEETTT-TEEEEECT-TSCEEEEE-CCST-TCCCCCEEE
T ss_pred ---CEEEEEcC-CCcEEEEECCC-CCCCceEEEECCCCCEEEeccCC-CeEEEECC-CCcEEEEE-CCcc-CCccceeEe
Confidence 25889998 66665543211 1111122333 56788776333 38999999 45665443 2211 112233443
Q ss_pred -eCCEEEEEcCCceEEEEEcC
Q 045821 302 -IGKTIFVIGKGCSAVVIDVG 321 (352)
Q Consensus 302 -~~~~i~v~gG~~~~~~~d~~ 321 (352)
-++.||+.+.. .+..||++
T Consensus 280 ~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 280 GKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp CTTSCEEEECSS-EEEEEEEC
T ss_pred CCCCCEEEEccC-ceEEeCCC
Confidence 36788887763 67778875
No 36
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.96 E-value=0.00074 Score=56.88 Aligned_cols=153 Identities=6% Similarity=-0.088 Sum_probs=98.5
Q ss_pred ceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCc
Q 045821 112 GMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 112 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
..++...++.+|+..|..+ .+.++|+.+++-..-- ++...+..+++..+++||+....+ +.+++||+.|.+
T Consensus 57 tqGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~--~~v~V~D~~Tl~ 127 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE--GLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS--CEEEEEETTTTE
T ss_pred cceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC--CEEEEEECCcCc
Confidence 3567777899999988543 3889999998743222 443334455777789999997654 789999999875
Q ss_pred EE-EecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee-ecCCCC-CCCCCC--cEEEECCEEEEEec
Q 045821 192 WK-LHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL-HADANM-ASGWRG--PAVVVDDALYVLDQ 266 (352)
Q Consensus 192 W~-~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~-~~~~~~-~~~~~~--~~~~~~~~l~~~gg 266 (352)
-. +++ ......+.+.-+++||+.-| ...+..+|+.+.+-. .+.... ...... -....+|+||+ +-
T Consensus 128 ~~~ti~---~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lya-nv 197 (268)
T 3nok_A 128 RERTTR---YSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYA-NI 197 (268)
T ss_dssp EEEEEE---CSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE-EE
T ss_pred EEEEEe---CCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEE-EE
Confidence 32 333 22333455666778999854 237999999887643 232211 111111 12345889884 43
Q ss_pred CCCCeEEEEeCCCCceE
Q 045821 267 SSGTKLMMWQKESREWS 283 (352)
Q Consensus 267 ~~~~~v~~yd~~~~~W~ 283 (352)
...+.|.+.|+++++-.
T Consensus 198 w~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 198 WHSSDVLEIDPATGTVV 214 (268)
T ss_dssp TTCSEEEEECTTTCBEE
T ss_pred CCCCeEEEEeCCCCcEE
Confidence 44459999999998743
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.92 E-value=0.0056 Score=52.16 Aligned_cols=223 Identities=9% Similarity=0.000 Sum_probs=118.5
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEE-ECCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEV-LGKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.+|+... ..-.+..||+ . +.+..+.... ....-+.++. -++.+|+.... ...+++||+. +
T Consensus 25 ~g~l~v~~~----~~~~v~~~d~--~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g 87 (299)
T 2z2n_A 25 KGKVWITQH----KANMISCINL--D-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA------ANKIGRITKK-G 87 (299)
T ss_dssp TSCEEEEET----TTTEEEEECT--T-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-S
T ss_pred CCCEEEEec----CCCcEEEEcC--C-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC------CCeEEEECCC-C
Confidence 566776532 1235677898 6 6666554221 1111223333 25678887532 2468889886 4
Q ss_pred eeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCCCC
Q 045821 147 TWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASAAT 224 (352)
Q Consensus 147 ~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~~~ 224 (352)
+...+...........++.. ++++|+..... ..+.+||+ +++...+............+.. +|++|+....
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---- 160 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNG--NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ---- 160 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTT--TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT----
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecCC--ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC----
Confidence 44443311111222333333 57888876432 57899999 6666655422111112222322 6789987421
Q ss_pred CceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE-
Q 045821 225 SHVCALVYEPSTDSWLHADANMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA- 301 (352)
Q Consensus 225 ~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~- 301 (352)
...+.+||+ +++...+..+.. ......+.. ++.||+.....+ .+.+||+ +++..... ++.. .....+++.
T Consensus 161 -~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~-~i~~~~~-~g~~~~~~-~~~~-~~~~~~i~~~ 233 (299)
T 2z2n_A 161 -NNAIGRITE-SGDITEFKIPTP-ASGPVGITKGNDDALWFVEIIGN-KIGRITT-SGEITEFK-IPTP-NARPHAITAG 233 (299)
T ss_dssp -TTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTTT-EEEEECT-TCCEEEEE-CSST-TCCEEEEEEC
T ss_pred -CCEEEEEcC-CCcEEEeeCCCC-CCcceeEEECCCCCEEEEccCCc-eEEEECC-CCcEEEEE-CCCC-CCCceeEEEC
Confidence 126889999 777765422111 111112332 567887764333 8999999 77776542 2211 112223333
Q ss_pred eCCEEEEEc-CCceEEEEEcC
Q 045821 302 IGKTIFVIG-KGCSAVVIDVG 321 (352)
Q Consensus 302 ~~~~i~v~g-G~~~~~~~d~~ 321 (352)
-++.||+.. +...+..||+.
T Consensus 234 ~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 234 AGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp STTCEEEEETTTTEEEEEETT
T ss_pred CCCCEEEeccCCceEEEECCC
Confidence 356788876 44567789983
No 38
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.91 E-value=0.0021 Score=54.49 Aligned_cols=195 Identities=14% Similarity=0.010 Sum_probs=113.0
Q ss_pred eEEEEEC-CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCc
Q 045821 113 MGFEVLG-KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 113 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
+.+...+ +.+|+..|..+ .+.+.++|+.+++-...-+++........+..++++|+....+ +.+.+||+.|.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~--~~v~viD~~t~~ 97 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK--NIGFIYDRRTLS 97 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC--SEEEEEETTTTE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC--CEEEEEECCCCc
Confidence 4556555 79999877422 4789999999997543322333233445666788999997644 789999999764
Q ss_pred E-EEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee-ecCCCC-CCCC--CCcEEEECCEEEEEec
Q 045821 192 W-KLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL-HADANM-ASGW--RGPAVVVDDALYVLDQ 266 (352)
Q Consensus 192 W-~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~-~~~~~~-~~~~--~~~~~~~~~~l~~~gg 266 (352)
= ..++. + .....+.+.-++++|+..| ...+..+|+.+.+-. .++... .... -......+++||+-..
T Consensus 98 v~~~i~~-g-~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~ 169 (266)
T 2iwa_A 98 NIKNFTH-Q-MKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIW 169 (266)
T ss_dssp EEEEEEC-C-SSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred EEEEEEC-C-CCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecC
Confidence 2 22331 2 1222333334567888743 247999999886543 332211 1111 1112334889886654
Q ss_pred CCCCeEEEEeCCCCceE---EccCCCC-------CcCCCCceEEEe--CCEEEEEcCCc-eEEEEEcCC
Q 045821 267 SSGTKLMMWQKESREWS---PVGRLST-------LLTRPPCKLVAI--GKTIFVIGKGC-SAVVIDVGN 322 (352)
Q Consensus 267 ~~~~~v~~yd~~~~~W~---~~~~~~~-------~~~~~~~~~~~~--~~~i~v~gG~~-~~~~~d~~~ 322 (352)
.. +.|.+.|+.+++-. .++.+.. .......+++.. ++++||-|+.. ++++.|...
T Consensus 170 ~~-~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 170 QT-DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TS-SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CC-CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 43 49999999987633 3321100 000111344433 56899998765 455666654
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.87 E-value=0.0025 Score=53.68 Aligned_cols=225 Identities=11% Similarity=0.024 Sum_probs=114.4
Q ss_pred CCEEEE-EEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYA-FCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~-~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.+|+ ... ..-.+..||+ .+.....+.... . ..-..++.. ++.+|+... ...+.+||+.+
T Consensus 34 ~g~l~v~~~~----~~~~i~~~~~--~~~~~~~~~~~~---~-~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~ 96 (270)
T 1rwi_B 34 AGNVYVTSEG----MYGRVVKLAT--GSTGTTVLPFNG---L-YQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGS 96 (270)
T ss_dssp TCCEEEEECS----SSCEEEEECC-------EECCCCS---C-CSCCCEEECTTCCEEEEET-------TTEEEEECTTC
T ss_pred CCCEEEEccC----CCCcEEEecC--CCcccceEeeCC---c-CCcceeEECCCCCEEEEcC-------CCEEEEEeCCC
Confidence 556887 422 2235666787 665544432211 1 111223333 567888754 24688999887
Q ss_pred CeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCCC
Q 045821 146 NTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASAA 223 (352)
Q Consensus 146 ~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~~ 223 (352)
+....+..... .....++.. ++++|+..... ..+.+||..+........ .....-...+.. +|++|+.....
T Consensus 97 ~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~--~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~-- 170 (270)
T 1rwi_B 97 NNQTVLPFDGL-NYPEGLAVDTQGAVYVADRGN--NRVVKLAAGSKTQTVLPF-TGLNDPDGVAVDNSGNVYVTDTDN-- 170 (270)
T ss_dssp SCCEECCCCSC-SSEEEEEECTTCCEEEEEGGG--TEEEEECTTCCSCEECCC-CSCCSCCCEEECTTCCEEEEEGGG--
T ss_pred ceEeeeecCCc-CCCcceEECCCCCEEEEECCC--CEEEEEECCCceeEeecc-ccCCCceeEEEeCCCCEEEEECCC--
Confidence 76544432111 112233333 57888875432 568888877665443321 111111223332 68899874322
Q ss_pred CCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE
Q 045821 224 TSHVCALVYEPSTDSWLHADANMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA 301 (352)
Q Consensus 224 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 301 (352)
..+.+||+.+..-...... .......+.+ ++.||+.....+ .+.+||+.+..-....... .....+++.
T Consensus 171 ---~~i~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l~v~~~~~~-~v~~~~~~~~~~~~~~~~~---~~~p~~i~~ 241 (270)
T 1rwi_B 171 ---NRVVKLEAESNNQVVLPFT--DITAPWGIAVDEAGTVYVTEHNTN-QVVKLLAGSTTSTVLPFTG---LNTPLAVAV 241 (270)
T ss_dssp ---TEEEEECTTTCCEEECCCS--SCCSEEEEEECTTCCEEEEETTTS-CEEEECTTCSCCEECCCCS---CSCEEEEEE
T ss_pred ---CEEEEEecCCCceEeeccc--CCCCceEEEECCCCCEEEEECCCC-cEEEEcCCCCcceeeccCC---CCCceeEEE
Confidence 2688999877654433211 1111122333 567887764433 8999999876543322110 112233433
Q ss_pred -eCCEEEEEcC-CceEEEEEcCCcc
Q 045821 302 -IGKTIFVIGK-GCSAVVIDVGNIG 324 (352)
Q Consensus 302 -~~~~i~v~gG-~~~~~~~d~~~~~ 324 (352)
.++.||+... ...+.+|+.....
T Consensus 242 ~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 242 DSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCCCEEEEECCCCEEEEEcCCCcc
Confidence 3567888754 4466678876543
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.82 E-value=0.00094 Score=59.71 Aligned_cols=222 Identities=16% Similarity=0.139 Sum_probs=113.2
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
+..||+.++.+ -.+.++|. .++......... . .-..++.. +..+|+.+.. ...+.+||+.+
T Consensus 43 g~~l~~~~~~d----~~i~v~d~--~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~ 105 (391)
T 1l0q_A 43 GTKVYVANAHS----NDVSIIDT--ATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTS 105 (391)
T ss_dssp SSEEEEEEGGG----TEEEEEET--TTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTT
T ss_pred CCEEEEECCCC----CeEEEEEC--CCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEEEEECCC
Confidence 45677766431 24566788 766554433332 1 11222332 3456666532 35789999998
Q ss_pred CeeEecCCCCCcceeeeeEEE-C-CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CC-EEEEEccCC
Q 045821 146 NTWTDAAPMSTARCYFPCGVL-N-QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DG-KIYIRCSAS 221 (352)
Q Consensus 146 ~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g-~iyv~GG~~ 221 (352)
++....-.... ....++.. + ..+|+.++.+ ..+.+||..+.+....-..... ....+.. ++ .||+.++..
T Consensus 106 ~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 106 NTVAGTVKTGK--SPLGLALSPDGKKLYVTNNGD--KTVSVINTVTKAVINTVSVGRS--PKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp TEEEEEEECSS--SEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECCSS--EEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEeCCC--CcceEEECCCCCEEEEEeCCC--CEEEEEECCCCcEEEEEecCCC--cceEEECCCCCEEEEEeCCC
Confidence 87543322211 11223322 3 3577777644 6899999998875543222111 1222222 44 677775433
Q ss_pred CCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECCE-EEEEecC-CCCeEEEEeCCCCceEEccCCCCCcCCCCc
Q 045821 222 AATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDDA-LYVLDQS-SGTKLMMWQKESREWSPVGRLSTLLTRPPC 297 (352)
Q Consensus 222 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~-l~~~gg~-~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 297 (352)
..+..||..+++....-.. ......+. -+++ |++.+.. ....+.+||+.+.+-...-.... ...
T Consensus 180 -----~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~ 247 (391)
T 1l0q_A 180 -----MSISVIDTVTNSVIDTVKV---EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP----DPA 247 (391)
T ss_dssp -----TEEEEEETTTTEEEEEEEC---SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS----SEE
T ss_pred -----CEEEEEECCCCeEEEEEec---CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC----Ccc
Confidence 2588899987765433211 11111122 2454 5544421 22489999998765432211111 112
Q ss_pred eEEE--eCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 298 KLVA--IGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 298 ~~~~--~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
++.. .+..||+.++.+ .+.+||+++..
T Consensus 248 ~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 248 GIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 2222 244677775544 56689988654
No 41
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.80 E-value=0.0015 Score=54.88 Aligned_cols=160 Identities=16% Similarity=-0.045 Sum_probs=99.8
Q ss_pred eeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee
Q 045821 161 FPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL 240 (352)
Q Consensus 161 ~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~ 240 (352)
......++.+|+..|....+.+.++|+.|++=..--+++......+.+..+++||++.... ..+++||+.+.+-.
T Consensus 46 qGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTCCEE
T ss_pred ceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEECccCcEE
Confidence 4555568999999996655789999999997544434554444556777899999995322 47999999887653
Q ss_pred -ecCCCCCCCCCCcEEEE-CCEEEEEecCCCCeEEEEeCCCCceE-EccCCCCCcC-CCCceEEEeCCEEEEEc-CCceE
Q 045821 241 -HADANMASGWRGPAVVV-DDALYVLDQSSGTKLMMWQKESREWS-PVGRLSTLLT-RPPCKLVAIGKTIFVIG-KGCSA 315 (352)
Q Consensus 241 -~~~~~~~~~~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~~~~W~-~~~~~~~~~~-~~~~~~~~~~~~i~v~g-G~~~~ 315 (352)
+++... .+.+++. ++.||+..| . +.++.+|+++.+-. .+.-.....+ ...-.+...+++||+-- ..+.+
T Consensus 121 ~ti~~~~----eG~glt~dg~~L~~SdG-s-~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I 194 (262)
T 3nol_A 121 RSFNYDG----EGWGLTHNDQYLIMSDG-T-PVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKI 194 (262)
T ss_dssp EEEECSS----CCCCEEECSSCEEECCS-S-SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEE
T ss_pred EEEECCC----CceEEecCCCEEEEECC-C-CeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeE
Confidence 343321 3334444 456777766 3 38999999986533 2221111001 11112334588999754 45567
Q ss_pred EEEEcCCcccccceEE
Q 045821 316 VVIDVGNIGNIGGIMV 331 (352)
Q Consensus 316 ~~~d~~~~~w~~~~~~ 331 (352)
.++|+++..-.+...+
T Consensus 195 ~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 195 VRIDPETGKVTGIIDL 210 (262)
T ss_dssp EEECTTTCBEEEEEEC
T ss_pred EEEECCCCcEEEEEEC
Confidence 7899988764443333
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.73 E-value=0.013 Score=50.34 Aligned_cols=190 Identities=10% Similarity=0.080 Sum_probs=96.2
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++..++.|+. ...+.+||..+++-.. +... .... ..+.. -++..++.|+.+ ..+.+||..+.+-...-
T Consensus 76 ~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~~-~~~v-~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 76 DSNLLVSASD------DKTLKIWDVSSGKCLKTLKGH-SNYV-FCCNFNPQSNLIVSGSFD--ESVRIWDVKTGKCLKTL 145 (312)
T ss_dssp TSSEEEEEET------TSEEEEEETTTCCEEEEEECC-SSCE-EEEEECSSSSEEEEEETT--SCEEEEETTTCCEEEEE
T ss_pred CCCEEEEECC------CCEEEEEECCCCcEEEEEcCC-CCCE-EEEEEcCCCCEEEEEeCC--CcEEEEECCCCEEEEEe
Confidence 4556666654 3468888988765322 1111 1111 11111 145666667655 67899999887643221
Q ss_pred CCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEEECCEEEEEecCCCCeEEEE
Q 045821 197 EPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVVVDDALYVLDQSSGTKLMMW 275 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~y 275 (352)
.............-++++++.|+.++ .+..||..+.+-... ...............+++.++.++.++ .+.+|
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~iw 219 (312)
T 4ery_A 146 PAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLW 219 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT-EEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC-eEEEE
Confidence 11111111111222667777766553 478889877654322 111111111111223566677777665 89999
Q ss_pred eCCCCceEEccCCCCCcCCC-CceEEEeCCEEEEEcCCce-EEEEEcCCcc
Q 045821 276 QKESREWSPVGRLSTLLTRP-PCKLVAIGKTIFVIGKGCS-AVVIDVGNIG 324 (352)
Q Consensus 276 d~~~~~W~~~~~~~~~~~~~-~~~~~~~~~~i~v~gG~~~-~~~~d~~~~~ 324 (352)
|..+..-...-......... .......++.+++.|+.+. +.++|+++..
T Consensus 220 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 220 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp ETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred ECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 99876543221111110111 1122234567777777664 6689987654
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.71 E-value=0.0042 Score=54.76 Aligned_cols=234 Identities=11% Similarity=0.115 Sum_probs=112.6
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.++++|+. .+ .+.+||. .+..+..+..+.. ....-.++... ++..++.|+.+ ..+.+||..++
T Consensus 19 ~~~~l~~~~~--d~--~v~i~~~--~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~ 84 (372)
T 1k8k_C 19 DRTQIAICPN--NH--EVHIYEK--SGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGR 84 (372)
T ss_dssp TSSEEEEECS--SS--EEEEEEE--ETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETT
T ss_pred CCCEEEEEeC--CC--EEEEEeC--CCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCC
Confidence 4455666653 12 4555577 6666555544431 11111222222 45566666532 45888898888
Q ss_pred eeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc-EEEecCCCCccc--ceeEEE-ECCEEEEEccC
Q 045821 147 TWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN-WKLHTEPNIFTE--IEDSFV-MDGKIYIRCSA 220 (352)
Q Consensus 147 ~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~-W~~~~~~~~~~~--~~~~~~-~~g~iyv~GG~ 220 (352)
++.....+...........+ ++..++.|+.+ ..+.+||..+.. |.........+. ...... -++++++.|+.
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGS--RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETT--SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCC--CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 76544322211111112222 45666666654 567777777654 333221111111 112222 26677777655
Q ss_pred CCCCCceEEEEEeCCCC---------ceee-------cCCCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCce
Q 045821 221 SAATSHVCALVYEPSTD---------SWLH-------ADANMASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREW 282 (352)
Q Consensus 221 ~~~~~~~~i~~yd~~~~---------~W~~-------~~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W 282 (352)
++ .+..||.... .|.. +............+. .++..++.++.++ .+.+||..+.+-
T Consensus 163 dg-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~ 236 (372)
T 1k8k_C 163 DF-----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-TVCLADADKKMA 236 (372)
T ss_dssp TS-----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT-EEEEEEGGGTTE
T ss_pred CC-----CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC-EEEEEECCCCce
Confidence 42 4677775321 1111 100001111111222 2566677777665 899999987653
Q ss_pred EEccCCCCCcCCCCceEEEeCCEEEEEcCCceEEEEEcCC--ccc
Q 045821 283 SPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCSAVVIDVGN--IGN 325 (352)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~d~~~--~~w 325 (352)
...-.... ..........++++++.|....+.+||... ..|
T Consensus 237 ~~~~~~~~--~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~ 279 (372)
T 1k8k_C 237 VATLASET--LPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKL 279 (372)
T ss_dssp EEEEECSS--CCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEE
T ss_pred eEEEccCC--CCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceE
Confidence 32211111 011112223477877777555677899877 555
No 44
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.68 E-value=0.019 Score=48.71 Aligned_cols=222 Identities=11% Similarity=-0.001 Sum_probs=118.2
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.||+... ..-.+..||+ . +....+.. +. ....-..++.- ++.+|+... ....+.+||+. +
T Consensus 30 ~g~l~v~~~----~~~~v~~~~~--~-~~~~~~~~-~~--~~~~~~~i~~~~~g~l~v~~~------~~~~v~~~d~~-g 92 (300)
T 2qc5_A 30 DGKVWFTQH----KANKISSLDQ--S-GRIKEFEV-PT--PDAKVMCLIVSSLGDIWFTEN------GANKIGKLSKK-G 92 (300)
T ss_dssp TSCEEEEET----TTTEEEEECT--T-SCEEEEEC-SS--TTCCEEEEEECTTSCEEEEET------TTTEEEEECTT-S
T ss_pred CCCEEEEcC----CCCeEEEECC--C-CceEEEEC-CC--CCCcceeEEECCCCCEEEEec------CCCeEEEECCC-C
Confidence 567887632 1235677898 6 66665432 21 11112233332 567888753 13568899988 6
Q ss_pred eeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEccCCCC
Q 045821 147 TWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAA 223 (352)
Q Consensus 147 ~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~ 223 (352)
+...+...........++.. ++++|+..... ..+.+||+. ++..... .+.......... -+|+||+.....
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~-- 166 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG--DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQN-- 166 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTT--TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT--
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCC--CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecCC--
Confidence 66544321111222333333 57888876432 578899998 6665443 221112222222 367898874221
Q ss_pred CCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE
Q 045821 224 TSHVCALVYEPSTDSWLHADANMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA 301 (352)
Q Consensus 224 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 301 (352)
..+.+||+ +++...+..+.. ......+.. ++.||+.....+ .+.+||+ ++++.... ++.. .....+++.
T Consensus 167 ---~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~-~i~~~~~-~g~~~~~~-~~~~-~~~~~~i~~ 237 (300)
T 2qc5_A 167 ---NSIGRITN-TGKLEEYPLPTN-AAAPVGITSGNDGALWFVEIMGN-KIGRITT-TGEISEYD-IPTP-NARPHAITA 237 (300)
T ss_dssp ---TEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTTT-EEEEECT-TCCEEEEE-CSST-TCCEEEEEE
T ss_pred ---CeEEEECC-CCcEEEeeCCCC-CCCcceEEECCCCCEEEEccCCC-EEEEEcC-CCcEEEEE-CCCC-CCCceEEEE
Confidence 25889998 666665432111 111122333 577887654333 7999999 56665543 2211 112223333
Q ss_pred -eCCEEEEEcC-CceEEEEEcC
Q 045821 302 -IGKTIFVIGK-GCSAVVIDVG 321 (352)
Q Consensus 302 -~~~~i~v~gG-~~~~~~~d~~ 321 (352)
-++.||+... ...+..||+.
T Consensus 238 d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 238 GKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT
T ss_pred CCCCCEEEeccCCCeEEEECCC
Confidence 2567888763 3567788873
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.007 Score=53.35 Aligned_cols=234 Identities=6% Similarity=0.043 Sum_probs=111.1
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--C--CEEEEEeCCCCCCCCCCeEEEEEC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--G--KNAYLLGGCGWSEDATSEVYCYDA 143 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~ 143 (352)
++..++.|+. .+...+| |. ....+..+..+.. .........+ . +.+++.|+.+ ..+.+||.
T Consensus 22 ~~~~l~~~~~--dg~i~iw--~~--~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSS--DKTIKIF--EV--EGETHKLIDTLTG---HEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKE 86 (379)
T ss_dssp SSSEEEEEET--TSCEEEE--EE--ETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEE
T ss_pred CCCEEEEEEC--CCcEEEE--ec--CCCcceeeeEecC---CCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEc
Confidence 4445556653 2334444 55 4445555444431 1122222333 2 5566666543 45888999
Q ss_pred CCCeeEecCCCCCcceeeeeEEE--C--CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcc-cceeEEEE--------
Q 045821 144 SMNTWTDAAPMSTARCYFPCGVL--N--QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFT-EIEDSFVM-------- 210 (352)
Q Consensus 144 ~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~-~~~~~~~~-------- 210 (352)
.+++|..+..+.........+.+ + +..++.|+.+ ..+.+||..+..-.....+.... ........
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC--CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 99887665544322222222222 3 5566666655 67888998876321110010111 11112221
Q ss_pred ------CCEEEEEccCCCCCCceEEEEEeCCCC--ceeecCCCCCCCCCCcEEE--EC---CEEEEEecCCCCeEEEEeC
Q 045821 211 ------DGKIYIRCSASAATSHVCALVYEPSTD--SWLHADANMASGWRGPAVV--VD---DALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 211 ------~g~iyv~GG~~~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~--~~---~~l~~~gg~~~~~v~~yd~ 277 (352)
++.+++.|+.++ .+..||..+. .+..+.....+...-..+. -+ +.+++.++.++ .+.+||.
T Consensus 165 ~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-~i~iwd~ 238 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-TCIIWTQ 238 (379)
T ss_dssp -----CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-CEEEEEE
T ss_pred cccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-EEEEEeC
Confidence 467777765543 3666666443 3443322111111111222 24 78888888766 8899998
Q ss_pred CCCce----EEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcCC-cccc
Q 045821 278 ESREW----SPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVGN-IGNI 326 (352)
Q Consensus 278 ~~~~W----~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~~-~~w~ 326 (352)
.+... ........ .....++. ..+++.++.++.+ .+.+||+.. ..|.
T Consensus 239 ~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~ 292 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKF--PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWE 292 (379)
T ss_dssp SSTTSCCEEEESSSSCC--SSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEE
T ss_pred CCCCccceeeeeccccC--CCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccc
Confidence 87631 11111111 11111222 2355555555444 466888773 3444
No 46
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.56 E-value=0.022 Score=49.63 Aligned_cols=197 Identities=14% Similarity=0.080 Sum_probs=100.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-C-CEEEEEeCCCCCCceEEEeCCCCcEE-Ee
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-N-QKIYCIGGLGDTHSWDVYDPRTNNWK-LH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~gG~~~~~~v~~yd~~t~~W~-~~ 195 (352)
++.+|+.............++++|+.+.+....-+.. ......+.. + +.+|+.++.+ ..+.+||+.+.+-. .+
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~ 127 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNTVN--SAVTAIDAKTGEVKGRL 127 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEETTT--TEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEecCC--CEEEEEeCCCCeeEEEE
Confidence 3567776532111112467899999887643221111 112233333 3 4588877644 68999999987642 23
Q ss_pred cCCCCcc-------c-ceeEEEE-C-CEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECC-EEEEE
Q 045821 196 TEPNIFT-------E-IEDSFVM-D-GKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDD-ALYVL 264 (352)
Q Consensus 196 ~~~~~~~-------~-~~~~~~~-~-g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~~~ 264 (352)
+ ..... . ....+.. + +.+|+.+... ...++.+|+.+.+-...-..........++.-++ .+|+.
T Consensus 128 ~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 128 V-LDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp E-SCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEE
T ss_pred e-cCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEE
Confidence 2 11111 0 1122222 4 4677774221 1358899998765433211111112233444455 45555
Q ss_pred ecCCCCeEEEEeCCCCceEEccCCCCC-cCCCCceEEE--eCCEEEEEcCC-ceEEEEEcCCcccc
Q 045821 265 DQSSGTKLMMWQKESREWSPVGRLSTL-LTRPPCKLVA--IGKTIFVIGKG-CSAVVIDVGNIGNI 326 (352)
Q Consensus 265 gg~~~~~v~~yd~~~~~W~~~~~~~~~-~~~~~~~~~~--~~~~i~v~gG~-~~~~~~d~~~~~w~ 326 (352)
.. .+ .+.+||+.+++-...-..+.. ......+++. -++.+|+.+.. ..+.+||+++....
T Consensus 203 ~~-~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 203 NA-DG-ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp CT-TS-EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cC-CC-eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 43 33 899999988765433222111 0111112222 35668877644 56778999776543
No 47
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.55 E-value=0.008 Score=52.20 Aligned_cols=239 Identities=10% Similarity=0.011 Sum_probs=110.4
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CC-EEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GK-NAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
+..||+.+.. .+....|.+++ .++.+..+...+.. ... ..++.. ++ .+|+.+.. ...+.+||...
T Consensus 49 g~~l~~~~~~--~~~v~~~~~~~--~~~~~~~~~~~~~~--~~~-~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~ 115 (343)
T 1ri6_A 49 KRYLYVGVRP--EFRVLAYRIAP--DDGALTFAAESALP--GSL-THISTDHQGQFVFVGSYN------AGNVSVTRLED 115 (343)
T ss_dssp SSEEEEEETT--TTEEEEEEECT--TTCCEEEEEEEECS--SCC-SEEEECTTSSEEEEEETT------TTEEEEEEEET
T ss_pred CCEEEEeecC--CCeEEEEEecC--CCCceeeccccccC--CCC-cEEEEcCCCCEEEEEecC------CCeEEEEECCC
Confidence 4556655332 24555665665 67777766544321 111 222222 33 46665431 24578888732
Q ss_pred Ce-eEecCCCCCcceeeeeEEE-C-CEEEEEeCCCCCCceEEEeCCC-CcEEEec--C--CCCcccceeEEE-ECC-EEE
Q 045821 146 NT-WTDAAPMSTARCYFPCGVL-N-QKIYCIGGLGDTHSWDVYDPRT-NNWKLHT--E--PNIFTEIEDSFV-MDG-KIY 215 (352)
Q Consensus 146 ~~-W~~~~~~~~~r~~~~~~~~-~-~~iyv~gG~~~~~~v~~yd~~t-~~W~~~~--~--~~~~~~~~~~~~-~~g-~iy 215 (352)
+. ...+...........++.. + ..+|+.+..+ ..+.+||..+ .+...+. . .+.......++. -++ .+|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 116 GLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ--DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp TEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG--TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CccccccccccCCCCceEEEECCCCCEEEEecCCC--CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 22 2222212211112223332 3 3677765332 6788999987 6665322 1 111111112222 245 477
Q ss_pred EEccCCCCCCceEEEEEeC--CCCceeec---CCCCCC---CCCCcEEEE--CC-EEEEEecCCCCeEEEEeCC--CCce
Q 045821 216 IRCSASAATSHVCALVYEP--STDSWLHA---DANMAS---GWRGPAVVV--DD-ALYVLDQSSGTKLMMWQKE--SREW 282 (352)
Q Consensus 216 v~GG~~~~~~~~~i~~yd~--~~~~W~~~---~~~~~~---~~~~~~~~~--~~-~l~~~gg~~~~~v~~yd~~--~~~W 282 (352)
+.+... ..+..||. .+.++..+ ...+.. ......+.+ ++ .||+.+...+ .+.+||.. ++++
T Consensus 194 ~~~~~~-----~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~-~i~v~d~~~~~~~~ 267 (343)
T 1ri6_A 194 CVNELN-----SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS-LITVFSVSEDGSVL 267 (343)
T ss_dssp EEETTT-----TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT-EEEEEEECTTSCCE
T ss_pred EEeCCC-----CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCC-EEEEEEEcCCCCce
Confidence 764222 25777777 34444322 111111 111112322 34 5665554333 89999887 5667
Q ss_pred EEccCCCCCcCCCCceEEEeCCEEEEEcC-CceEEEE--EcCCccccc
Q 045821 283 SPVGRLSTLLTRPPCKLVAIGKTIFVIGK-GCSAVVI--DVGNIGNIG 327 (352)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~i~v~gG-~~~~~~~--d~~~~~w~~ 327 (352)
..+..++....-...++..-+..||+.++ ...+.+| |.++..+..
T Consensus 268 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 315 (343)
T 1ri6_A 268 SKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHE 315 (343)
T ss_dssp EEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEE
T ss_pred EEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeE
Confidence 76654443211111222222445777664 3456677 554555544
No 48
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.55 E-value=0.009 Score=50.61 Aligned_cols=156 Identities=12% Similarity=-0.033 Sum_probs=94.6
Q ss_pred eeeEEEC-CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCce
Q 045821 161 FPCGVLN-QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSW 239 (352)
Q Consensus 161 ~~~~~~~-~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W 239 (352)
+.++..+ +.+|+..|....+.+.++|+.|++=...-+++........+..+++||+..-. ...+.+||+.+.+=
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t~~v 98 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTTTEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCCCcE
Confidence 4555554 89999988544488999999998754432333333444556678899999522 24799999987643
Q ss_pred -eecCCCCCCCCCCcEEEE-CCEEEEEecCCCCeEEEEeCCCCceE-Ecc--CCCCCcCCCCceEEEeCCEEEEEc-CCc
Q 045821 240 -LHADANMASGWRGPAVVV-DDALYVLDQSSGTKLMMWQKESREWS-PVG--RLSTLLTRPPCKLVAIGKTIFVIG-KGC 313 (352)
Q Consensus 240 -~~~~~~~~~~~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~~~~W~-~~~--~~~~~~~~~~~~~~~~~~~i~v~g-G~~ 313 (352)
..++.. .-.+..+.. ++.+|+..| .+.++.+|+++.+-. .+. .-+.+ ......+...+++||+-. ..+
T Consensus 99 ~~~i~~g---~~~g~glt~Dg~~l~vs~g--s~~l~viD~~t~~v~~~I~Vg~~~~p-~~~~nele~~dg~lyvn~~~~~ 172 (266)
T 2iwa_A 99 IKNFTHQ---MKDGWGLATDGKILYGSDG--TSILYEIDPHTFKLIKKHNVKYNGHR-VIRLNELEYINGEVWANIWQTD 172 (266)
T ss_dssp EEEEECC---SSSCCEEEECSSSEEEECS--SSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEETTEEEEEETTSS
T ss_pred EEEEECC---CCCeEEEEECCCEEEEECC--CCeEEEEECCCCcEEEEEEECCCCcc-cccceeEEEECCEEEEecCCCC
Confidence 233322 112344444 456787664 349999999886532 222 11111 111223344488999765 455
Q ss_pred eEEEEEcCCccccc
Q 045821 314 SAVVIDVGNIGNIG 327 (352)
Q Consensus 314 ~~~~~d~~~~~w~~ 327 (352)
.+.++|+++..-.+
T Consensus 173 ~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 173 CIARISAKDGTLLG 186 (266)
T ss_dssp EEEEEETTTCCEEE
T ss_pred eEEEEECCCCcEEE
Confidence 67789998866433
No 49
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.51 E-value=0.012 Score=51.18 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=94.2
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeE-ecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWT-DAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~-~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
+.+++.|+. ...+.+||..+++-. .+...+.. ...++.. +++.++.|+.+ ..+.+||..+..-...-.
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~g~~d--g~v~i~~~~~~~~~~~~~ 161 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVD--AWTLAFSPDSQYLATGTHV--GKVNIFGVESGKKEYSLD 161 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTEEEEEEECCTTC--CCCEEECTTSSEEEEECTT--SEEEEEETTTCSEEEEEE
T ss_pred CCEEEEEeC------CCcEEEEECCCCCEEEEEeCCCcc--EEEEEECCCCCEEEEEcCC--CcEEEEEcCCCceeEEec
Confidence 345555543 346788898877532 22211111 1112222 56666777655 678889988775332211
Q ss_pred CCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeC
Q 045821 198 PNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 198 ~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~ 277 (352)
.........+..-+++.++.|+.++ .+..||..+.+-...-..............++++++.|+.++ .+.+||.
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg-~i~iwd~ 235 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG-YIKIYDV 235 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTS-CEEEEET
T ss_pred CCCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCC-eEEEEEC
Confidence 1111111112223677777766553 478889877654322111111111112233677777887766 8999999
Q ss_pred CCCceEEccCCCCCcCCCCceEEE-eCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 278 ESREWSPVGRLSTLLTRPPCKLVA-IGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
.+...... +... .....++.. .+++.++.|+.+ .+.++|+.+..
T Consensus 236 ~~~~~~~~--~~~h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 236 QHANLAGT--LSGH-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp TTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCcceeEE--EcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 87654322 1110 011112222 255556666555 46689987644
No 50
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.50 E-value=0.0096 Score=49.98 Aligned_cols=185 Identities=14% Similarity=0.056 Sum_probs=96.2
Q ss_pred CCEEEE-EeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYL-LGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv-~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+|+ ... ....+.+||+.+.....+..... .....++.. ++++|+... . ..+.+||+.+.....+.
T Consensus 34 ~g~l~v~~~~------~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-~--~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 34 AGNVYVTSEG------MYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-N--NRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp TCCEEEEECS------SSCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-T--TEEEEECTTCSCCEECC
T ss_pred CCCEEEEccC------CCCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-C--CEEEEEeCCCceEeeee
Confidence 567888 432 23568888887766544432111 112233333 567888875 2 67899999887655443
Q ss_pred CCCCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEE
Q 045821 197 EPNIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMW 275 (352)
Q Consensus 197 ~~~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~y 275 (352)
.. ....-...+.. +|++|+..... ..+.++|..+.............-.+.++.-+++||+.....+ .+.+|
T Consensus 104 ~~-~~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~-~i~~~ 176 (270)
T 1rwi_B 104 FD-GLNYPEGLAVDTQGAVYVADRGN-----NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNN-RVVKL 176 (270)
T ss_dssp CC-SCSSEEEEEECTTCCEEEEEGGG-----TEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGT-EEEEE
T ss_pred cC-CcCCCcceEECCCCCEEEEECCC-----CEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCC-EEEEE
Confidence 21 11111222222 67899974322 2588888766554433211111111122223578888765433 89999
Q ss_pred eCCCCceEEccCCCCCcCCCCceEEEe-CCEEEEEcC-CceEEEEEcCCc
Q 045821 276 QKESREWSPVGRLSTLLTRPPCKLVAI-GKTIFVIGK-GCSAVVIDVGNI 323 (352)
Q Consensus 276 d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG-~~~~~~~d~~~~ 323 (352)
|+.+..-....... .....+++.. ++.||+... ...+..||+...
T Consensus 177 ~~~~~~~~~~~~~~---~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 177 EAESNNQVVLPFTD---ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CTTTCCEEECCCSS---CCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred ecCCCceEeecccC---CCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 99876644332111 1112334433 458888764 445778887653
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.49 E-value=0.015 Score=50.18 Aligned_cols=187 Identities=9% Similarity=-0.029 Sum_probs=94.4
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceee-eeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYF-PCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~-~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++..++.|+. ...+.+||..+++......+....... .++.. ++..++.++.+ ..+.+||..+.+....-
T Consensus 108 ~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 108 DGCTLIVGGE------ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD--GNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp TSSEEEEEES------SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEcC------CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC--CcEEEEeCCCCceeeee
Confidence 4555555543 356889999887644333222111111 12222 55666666654 67899999887643322
Q ss_pred CCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEe
Q 045821 197 EPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQ 276 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd 276 (352)
.............-+++.++.++.++ .+..||..+.+-...-. ............+++.+++++.++ .+.+||
T Consensus 180 ~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~-~i~~~~ 252 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGTKLWTGGLDN-----TVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESS-NVEVLH 252 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTS-CEEEEE
T ss_pred ecccCceEEEEECCCCCEEEEEecCC-----cEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCC-cEEEEE
Confidence 11111111111222666666665442 58888987765332211 111111111223667777777655 899999
Q ss_pred CCCCceEEccCCCCCcCCCCceEEE-eCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 277 KESREWSPVGRLSTLLTRPPCKLVA-IGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 277 ~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
..+..-..+..... ...++.. .++++++.++.+ .+.+||.+...
T Consensus 253 ~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 253 VNKPDKYQLHLHES----CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp TTSSCEEEECCCSS----CEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCeEEEcCCcc----ceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 98876444322211 1112222 245555555544 46689987654
No 52
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.48 E-value=0.03 Score=49.03 Aligned_cols=190 Identities=8% Similarity=0.028 Sum_probs=91.3
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCC--CcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMS--TARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKL 194 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~--~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~ 194 (352)
++..++.||.+ ..+.+||..+.. ......+. ..........-++.+ +.|+.+ ..+.+||..+.+-..
T Consensus 108 ~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l-~s~s~d--~~i~~wd~~~~~~~~ 178 (340)
T 1got_B 108 SGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQI-VTSSGD--TTCALWDIETGQQTT 178 (340)
T ss_dssp TSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEE-EEEETT--SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcE-EEEECC--CcEEEEECCCCcEEE
Confidence 45566666643 457788877643 11111111 111111111225554 444444 678999998876433
Q ss_pred ecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEE
Q 045821 195 HTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMM 274 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~ 274 (352)
.-..........+..-++++++.|+.++ .+..||..+..-...-...........+..++..++.|+.++ .+.+
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~-~v~i 252 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA-TCRL 252 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEE
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC-cEEE
Confidence 2111111111111222677778776553 477888876643322110110000111223677777887766 8999
Q ss_pred EeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 275 WQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 275 yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
||..+++-...-..+.. .....++. ..++++++.|+.+ .+.+||..+..
T Consensus 253 wd~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 253 FDLRADQELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp EETTTTEEEEEECCTTC-CSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EECCCCcEEEEEccCCc-ccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 99987653222111110 01111222 2356677777655 46689976543
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.46 E-value=0.0075 Score=54.54 Aligned_cols=195 Identities=12% Similarity=0.063 Sum_probs=97.9
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.+++.++.+ -.+.++|. .++......................+ ++.+++.++. ...+.+||..+
T Consensus 133 ~~~~~~~~~~~----~~i~~~d~--~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~ 200 (433)
T 3bws_A 133 NTRLAIPLLED----EGMDVLDI--NSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKT 200 (433)
T ss_dssp SSEEEEEBTTS----SSEEEEET--TTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTT
T ss_pred CCeEEEEeCCC----CeEEEEEC--CCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCC
Confidence 56677665431 23566688 77765543322110011111222233 6778877753 35688999987
Q ss_pred CeeE-ecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-ECC-EEEEEccC
Q 045821 146 NTWT-DAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDG-KIYIRCSA 220 (352)
Q Consensus 146 ~~W~-~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g-~iyv~GG~ 220 (352)
++.. .+..... .-..++.. +..+|+.++.+ ..+.+||+.+.+....-.. ......++. -++ .|++. +.
T Consensus 201 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~-~~ 273 (433)
T 3bws_A 201 LAYKATVDLTGK--WSKILLYDPIRDLVYCSNWIS--EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIA-QF 273 (433)
T ss_dssp CCEEEEEECSSS--SEEEEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEE-EE
T ss_pred ceEEEEEcCCCC--CeeEEEEcCCCCEEEEEecCC--CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEE-EC
Confidence 6533 2221111 11122222 34677776544 6799999998865443222 111122222 255 45544 33
Q ss_pred CCCC---CceEEEEEeCCCCceeecCCCCCCCCCCcEEEECC-EEEEEecCCCCeEEEEeCCCCceE
Q 045821 221 SAAT---SHVCALVYEPSTDSWLHADANMASGWRGPAVVVDD-ALYVLDQSSGTKLMMWQKESREWS 283 (352)
Q Consensus 221 ~~~~---~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~~~gg~~~~~v~~yd~~~~~W~ 283 (352)
.... ....+..||+.+.+-........ .....+..-++ .+|+.++..+ .+.+||..+++-.
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~-~v~v~d~~~~~~~ 338 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPG-NKRHIVSGNTENKIYVSDMCCS-KIEVYDLKEKKVQ 338 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEE-CEEEEEECSSTTEEEEEETTTT-EEEEEETTTTEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCC-CcceEEECCCCCEEEEEecCCC-EEEEEECCCCcEE
Confidence 2111 12378899988775433311000 00111122234 6777766555 8999999876543
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.46 E-value=0.02 Score=49.41 Aligned_cols=181 Identities=12% Similarity=0.056 Sum_probs=90.4
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.|+.+ ..+.+||..+++....-....... .+++.. ++..++.++.+ ..+.+||..+.+-...-.
T Consensus 152 ~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d--g~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 152 DSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHTDGA-SCIDISNDGTKLWTGGLD--NTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEETT--SEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEeCC------CcEEEEeCCCCceeeeeecccCce-EEEEECCCCCEEEEEecC--CcEEEEECCCCceEeeec
Confidence 45556666532 458889998876433211111111 112222 55566666654 678999998875333221
Q ss_pred CCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeC
Q 045821 198 PNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 198 ~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~ 277 (352)
... ........-+++++++|+..+ .+..||..+..-..+... ...........++++++.++.++ .+.+||.
T Consensus 223 ~~~-~v~~~~~s~~~~~l~~~~~~~-----~i~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg-~i~~~~~ 294 (337)
T 1gxr_A 223 FTS-QIFSLGYCPTGEWLAVGMESS-----NVEVLHVNKPDKYQLHLH-ESCVLSLKFAYCGKWFVSTGKDN-LLNAWRT 294 (337)
T ss_dssp CSS-CEEEEEECTTSSEEEEEETTS-----CEEEEETTSSCEEEECCC-SSCEEEEEECTTSSEEEEEETTS-EEEEEET
T ss_pred CCC-ceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCCeEEEcCC-ccceeEEEECCCCCEEEEecCCC-cEEEEEC
Confidence 111 111112223667777765442 478888877654333211 11101111223567777777665 8999999
Q ss_pred CCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEc
Q 045821 278 ESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDV 320 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~ 320 (352)
.+++-....... ....++. ..+++.++.|+.+ .+.+||+
T Consensus 295 ~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 295 PYGASIFQSKES----SSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTCCEEEEEECS----SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEecCC----CcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 887654322111 1111222 2345555555544 3556664
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.46 E-value=0.0082 Score=54.30 Aligned_cols=217 Identities=10% Similarity=0.030 Sum_probs=112.4
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCC---Ccce
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMS---TARC 159 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~---~~r~ 159 (352)
.++.+|+ .+..+..+..++.. ....+++.. ++.+++.++.+ ..+.+||+.+++........ ....
T Consensus 102 ~l~~~d~--~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDK--EGITHRFISRFKTG---FQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCB--TTCSEEEEEEEECS---SCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCC
T ss_pred EEEEECC--CCCcceEEEEEcCC---CCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCC
Confidence 6777888 77777666554321 111122222 67788776532 45899999988765433221 1111
Q ss_pred eeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-C-CEEEEEccCCCCCCceEEEEEeCC
Q 045821 160 YFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-D-GKIYIRCSASAATSHVCALVYEPS 235 (352)
Q Consensus 160 ~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~-g~iyv~GG~~~~~~~~~i~~yd~~ 235 (352)
....+.+ ++.+++.++.+ ..+.+||..+.+....-.... ......+.. + ..+|+.++.. ..+..||+.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d--~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~ 242 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA--NAVHVFDLKTLAYKATVDLTG-KWSKILLYDPIRDLVYCSNWIS-----EDISVIDRK 242 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG--TEEEEEETTTCCEEEEEECSS-SSEEEEEEETTTTEEEEEETTT-----TEEEEEETT
T ss_pred ceeEEEEcCCCEEEEEECCC--CEEEEEECCCceEEEEEcCCC-CCeeEEEEcCCCCEEEEEecCC-----CcEEEEECC
Confidence 1122223 67888888754 678999998865432211111 111122222 3 4577775333 268899998
Q ss_pred CCceeecCCCCCCCCCCcEEE--ECCEEEEEecC-------CCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEE
Q 045821 236 TDSWLHADANMASGWRGPAVV--VDDALYVLDQS-------SGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTI 306 (352)
Q Consensus 236 ~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gg~-------~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 306 (352)
+.+....-... .....+. .+++.+++++. ....+.+||+.+++-...-..+. .....++...++.+
T Consensus 243 ~~~~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l 317 (433)
T 3bws_A 243 TKLEIRKTDKI---GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKI 317 (433)
T ss_dssp TTEEEEECCCC---SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEE
T ss_pred CCcEEEEecCC---CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEE
Confidence 77654332111 1111222 24544444442 12378999998876443321111 00111121224468
Q ss_pred EEEcCCc-eEEEEEcCCcc
Q 045821 307 FVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 307 ~v~gG~~-~~~~~d~~~~~ 324 (352)
|+.++.+ .+.+||+++..
T Consensus 318 ~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEEETTTTEEEEEETTTTE
T ss_pred EEEecCCCEEEEEECCCCc
Confidence 8875444 56689987543
No 56
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.45 E-value=0.019 Score=52.07 Aligned_cols=187 Identities=7% Similarity=-0.008 Sum_probs=99.6
Q ss_pred eeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCE-EEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCccee
Q 045821 83 VCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKN-AYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCY 160 (352)
Q Consensus 83 ~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~ 160 (352)
..++++|. .++....+...+. ...+.+.. +++ |++.+..++ ...++.+|..+++...+...... .
T Consensus 203 ~~i~~~d~--~tg~~~~l~~~~~-----~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~~--~ 269 (415)
T 2hqs_A 203 SALVIQTL--ANGAVRQVASFPR-----HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRSN--N 269 (415)
T ss_dssp CEEEEEET--TTCCEEEEECCSS-----CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSSC--E
T ss_pred cEEEEEEC--CCCcEEEeecCCC-----cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCCc--c
Confidence 45677788 7777665554331 11122222 444 554544322 36799999998887666543321 1
Q ss_pred eeeEEE-CCE-EEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc
Q 045821 161 FPCGVL-NQK-IYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS 238 (352)
Q Consensus 161 ~~~~~~-~~~-iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~ 238 (352)
...+.. +++ |++.+..+....++.+|..+..-+.+... .......+..-+|+..++++... ....++.+|..+.+
T Consensus 270 ~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~spdG~~l~~~~~~~--g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE-GSQNQDADVSSDGKFMVMVSSNG--GQQHIAKQDLATGG 346 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS-SSEEEEEEECTTSSEEEEEEECS--SCEEEEEEETTTCC
T ss_pred cceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC-CCcccCeEECCCCCEEEEEECcC--CceEEEEEECCCCC
Confidence 112222 454 44444322225788999988775554321 11111112223666555544331 23478999999988
Q ss_pred eeecCCCCCCCCCCcEEEECCEEEEEecCCC--CeEEEEeCCCCceEEccC
Q 045821 239 WLHADANMASGWRGPAVVVDDALYVLDQSSG--TKLMMWQKESREWSPVGR 287 (352)
Q Consensus 239 W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~--~~v~~yd~~~~~W~~~~~ 287 (352)
...+.... .....+..-+++.+++++..+ ..++++|..++....+..
T Consensus 347 ~~~l~~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 347 VQVLSSTF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEECCCSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred EEEecCCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 87764421 111122333666555555433 378999998877766643
No 57
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.42 E-value=0.017 Score=49.75 Aligned_cols=188 Identities=7% Similarity=0.003 Sum_probs=91.0
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.|+.+ ..+.+||..+++....-....... ..++.. +++.++.|+.+ ..+.+||..+.+-...-.
T Consensus 34 ~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~~~d--~~i~vwd~~~~~~~~~~~ 104 (312)
T 4ery_A 34 NGEWLASSSAD------KLIKIWGAYDGKFEKTISGHKLGI-SDVAWSSDSNLLVSASDD--KTLKIWDVSSGKCLKTLK 104 (312)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCE-EEEEECTTSSEEEEEETT--SEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEeeCC------CeEEEEeCCCcccchhhccCCCce-EEEEEcCCCCEEEEECCC--CEEEEEECCCCcEEEEEc
Confidence 34455555533 346778887766543221111111 112222 56666777655 678999998876432211
Q ss_pred CCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeC
Q 045821 198 PNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 198 ~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~ 277 (352)
............-++.+++.|+.++ .+..||..+.+-...-..............++++++.|+.++ .+.+||.
T Consensus 105 ~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~wd~ 178 (312)
T 4ery_A 105 GHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIWDT 178 (312)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEET
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-cEEEEEC
Confidence 1111111111222566777766553 478888877654322111111100111223667777787766 8999999
Q ss_pred CCCceEEccCCCCCcCCCCceE-EEeCCEEEEEcCCc-eEEEEEcCCc
Q 045821 278 ESREWSPVGRLSTLLTRPPCKL-VAIGKTIFVIGKGC-SAVVIDVGNI 323 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~~~~~~~~-~~~~~~i~v~gG~~-~~~~~d~~~~ 323 (352)
.+++....-.... ......+ ...+++.++.|+.+ .+.+||..+.
T Consensus 179 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 179 ASGQCLKTLIDDD--NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp TTCCEEEEECCSS--CCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred CCCceeeEEeccC--CCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 8766432211111 0111111 12244555555444 4557887654
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.39 E-value=0.044 Score=49.81 Aligned_cols=188 Identities=13% Similarity=0.125 Sum_probs=99.4
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
.++..++.|+. ...+.+||..+++-.. +..... ......+++..++.|+.+ ..+.+||..+.+-...
T Consensus 207 ~~~~~l~s~s~------dg~i~~wd~~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~- 274 (445)
T 2ovr_B 207 LHEKRVVSGSR------DATLRVWDIETGQCLHVLMGHVA---AVRCVQYDGRRVVSGAYD--FMVKVWDPETETCLHT- 274 (445)
T ss_dssp EETTEEEEEET------TSEEEEEESSSCCEEEEEECCSS---CEEEEEECSSCEEEEETT--SCEEEEEGGGTEEEEE-
T ss_pred ecCCEEEEEeC------CCEEEEEECCCCcEEEEEcCCcc---cEEEEEECCCEEEEEcCC--CEEEEEECCCCcEeEE-
Confidence 34444555553 3568889988765322 211111 112233377777777765 6788999887653222
Q ss_pred CCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEe
Q 045821 197 EPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQ 276 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd 276 (352)
+........++.+++..++.|+.++ .+..||..+.+-...-. ........+..++..++.|+.++ .+.+||
T Consensus 275 -~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg-~i~vwd 345 (445)
T 2ovr_B 275 -LQGHTNRVYSLQFDGIHVVSGSLDT-----SIRVWDVETGNCIHTLT--GHQSLTSGMELKDNILVSGNADS-TVKIWD 345 (445)
T ss_dssp -ECCCSSCEEEEEECSSEEEEEETTS-----CEEEEETTTCCEEEEEC--CCCSCEEEEEEETTEEEEEETTS-CEEEEE
T ss_pred -ecCCCCceEEEEECCCEEEEEeCCC-----eEEEEECCCCCEEEEEc--CCcccEEEEEEeCCEEEEEeCCC-eEEEEE
Confidence 2211222233444777777766553 48888987765332211 11111123344566677777666 899999
Q ss_pred CCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCc-eEEEEEcCCccccc
Q 045821 277 KESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC-SAVVIDVGNIGNIG 327 (352)
Q Consensus 277 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~-~~~~~d~~~~~w~~ 327 (352)
..+++-...-..+........++ ..++..++.|+.+ .+.+||+++....+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNKHQSAVTCL-QFNKNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp TTTCCEEEEECSTTSCSSCEEEE-EECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCcEEEEEccCCCCCCCEEEE-EECCCEEEEEeCCCeEEEEECCCCceee
Confidence 98765432211111111111223 3456666666655 46689988765433
No 59
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.037 Score=47.12 Aligned_cols=148 Identities=11% Similarity=0.057 Sum_probs=73.9
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceee-cCCC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADAN 245 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~ 245 (352)
++..++.++.+ ..+.+||..+. -..+...........+..-+++ ++.|+.++ .+..||..+.+-.. +..
T Consensus 154 ~~~~l~~~~~d--~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~~~~~~~~- 223 (313)
T 3odt_A 154 SENKFLTASAD--KTIKLWQNDKV-IKTFSGIHNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGDVLRTYEG- 223 (313)
T ss_dssp TTTEEEEEETT--SCEEEEETTEE-EEEECSSCSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCCEEEEEEC-
T ss_pred CCCEEEEEECC--CCEEEEecCce-EEEEeccCcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchhhhhhhhc-
Confidence 55566666655 67888883322 2222211222222233444777 55555442 58888887654322 211
Q ss_pred CCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCceEEEEEcCC
Q 045821 246 MASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 246 ~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~d~~~ 322 (352)
.. .....+. .++. ++.|+.++ .+.+||..+.+....-..+. ....++. ..++++++.+....+.+||+++
T Consensus 224 ~~--~~i~~~~~~~~~~-l~~~~~dg-~v~iwd~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 224 HE--SFVYCIKLLPNGD-IVSCGEDR-TVRIWSKENGSLKQVITLPA---ISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp CS--SCEEEEEECTTSC-EEEEETTS-EEEEECTTTCCEEEEEECSS---SCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred CC--ceEEEEEEecCCC-EEEEecCC-EEEEEECCCCceeEEEeccC---ceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 11 1111122 2454 55566555 89999998876544322221 1112222 2355655434344577899999
Q ss_pred cccccceEE
Q 045821 323 IGNIGGIMV 331 (352)
Q Consensus 323 ~~w~~~~~~ 331 (352)
..+.....+
T Consensus 297 ~~~~~~~~~ 305 (313)
T 3odt_A 297 SRWASEDEI 305 (313)
T ss_dssp GGCCC----
T ss_pred Cceeehhhh
Confidence 887664443
No 60
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.38 E-value=0.013 Score=57.84 Aligned_cols=214 Identities=6% Similarity=-0.032 Sum_probs=117.3
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCC---Cc-c
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMS---TA-R 158 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~---~~-r 158 (352)
-++.||+ .++.++.+..... ....-.++..- ++.|++... ..+++||+.+++|....... .+ .
T Consensus 428 Gl~~~~~--~~~~~~~~~~~~~--~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 495 (781)
T 3v9f_A 428 NISYYNT--RLKKFQIIELEKN--ELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLEN 495 (781)
T ss_dssp EEEEECS--SSCEEEECCSTTT--CCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCS
T ss_pred CEEEEcC--CCCcEEEeccCCC--CCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccc
Confidence 3566787 7777776653210 11111222222 467776431 45899999998887654322 11 1
Q ss_pred eeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccc--eeEEE-ECCEEEEEccCCCCCCceEE-EEEe
Q 045821 159 CYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEI--EDSFV-MDGKIYIRCSASAATSHVCA-LVYE 233 (352)
Q Consensus 159 ~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~--~~~~~-~~g~iyv~GG~~~~~~~~~i-~~yd 233 (352)
.-.+++.- ++.|++.... ..+.+||+.+++++........... .+.+. .+|+|++... . .+ .+||
T Consensus 496 ~i~~i~~d~~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~------Glv~~~d 565 (781)
T 3v9f_A 496 FVRSIAQDSEGRFWIGTFG---GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-E------GLVCFPS 565 (781)
T ss_dssp CEEEEEECTTCCEEEEESS---SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-T------EEEEESC
T ss_pred eeEEEEEcCCCCEEEEEcC---CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-C------CceEEEC
Confidence 11122222 4677775421 3588999999998887532111111 11222 2678888632 2 36 8999
Q ss_pred CCCCceeecCCC--CCCCCCCcEEE-ECCEEEEEecCCCCeEEEEeCCCCceEEcc---CCCCCcCCCCceEEEe-CCEE
Q 045821 234 PSTDSWLHADAN--MASGWRGPAVV-VDDALYVLDQSSGTKLMMWQKESREWSPVG---RLSTLLTRPPCKLVAI-GKTI 306 (352)
Q Consensus 234 ~~~~~W~~~~~~--~~~~~~~~~~~-~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~---~~~~~~~~~~~~~~~~-~~~i 306 (352)
+.++++...... .+.......+. .+|.|++.+. . .+.+||++++++.... .++...... .+++.. ++.|
T Consensus 566 ~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~-~--Gl~~~~~~~~~~~~~~~~dGl~~~~f~~-~~~~~~~~G~l 641 (781)
T 3v9f_A 566 ARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN-T--GISCYITSKKCFYTYDHSNNIPQGSFIS-GCVTKDHNGLI 641 (781)
T ss_dssp TTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS-S--CEEEEETTTTEEEEECGGGTCCSSCEEE-EEEEECTTSCE
T ss_pred CCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC-C--ceEEEECCCCceEEecccCCcccccccc-CceEECCCCEE
Confidence 999888766431 11111122222 2567776643 3 5999999999987764 233211111 133333 4554
Q ss_pred EEEcCCceEEEEEcCCcc
Q 045821 307 FVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 307 ~v~gG~~~~~~~d~~~~~ 324 (352)
.||+......||++...
T Consensus 642 -~~g~~~Gl~~f~p~~~~ 658 (781)
T 3v9f_A 642 -YFGSINGLCFFNPDIAI 658 (781)
T ss_dssp -EEEETTEEEEECSCCGG
T ss_pred -EEECCCceEEEChhhcc
Confidence 45777788889987643
No 61
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.36 E-value=0.029 Score=48.55 Aligned_cols=247 Identities=13% Similarity=0.040 Sum_probs=119.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCe--eEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEEC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSW--KMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDA 143 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w--~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~ 143 (352)
+..+|+.+.. ...++.+|+ .+... ..+.... .+. ++++.. +..+| .+... .....+.+||.
T Consensus 51 g~~l~~~~~~----~~~i~~~d~--~~~~~~~~~~~~~~---~~~--~~~~~s~dg~~l~-~~~~~---~~~~~i~v~d~ 115 (331)
T 3u4y_A 51 CSNVVVTSDF----CQTLVQIET--QLEPPKVVAIQEGQ---SSM--ADVDITPDDQFAV-TVTGL---NHPFNMQSYSF 115 (331)
T ss_dssp SCEEEEEEST----TCEEEEEEC--SSSSCEEEEEEECS---SCC--CCEEECTTSSEEE-ECCCS---SSSCEEEEEET
T ss_pred CCEEEEEeCC----CCeEEEEEC--CCCceeEEecccCC---CCc--cceEECCCCCEEE-EecCC---CCcccEEEEEC
Confidence 4557766542 226777888 77664 2222221 111 212222 34566 33211 11238999999
Q ss_pred CCCeeEecCCCCCcceeeeeEEE-CC-EEEEEeCCCCCCc-eEEEeCCCCc-EEEe--cCCCCcccceeEEE-ECCE-EE
Q 045821 144 SMNTWTDAAPMSTARCYFPCGVL-NQ-KIYCIGGLGDTHS-WDVYDPRTNN-WKLH--TEPNIFTEIEDSFV-MDGK-IY 215 (352)
Q Consensus 144 ~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~-v~~yd~~t~~-W~~~--~~~~~~~~~~~~~~-~~g~-iy 215 (352)
.+++....-.. ....+.++.. ++ .+|+.+... .. +.+|+...+. -... ...+........+. -+|+ +|
T Consensus 116 ~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 116 LKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS--ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAF 191 (331)
T ss_dssp TTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT--TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEE
T ss_pred CCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC--CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEE
Confidence 98875433211 1112333333 44 577776543 44 7777765432 1111 00111111112222 2554 78
Q ss_pred EEccCCCCCCceEEEEEeCCCCce----eecCCCCCCCCCCcEEEECCE-EEEEecCCCCeEEEEeCCCCceEEccCCCC
Q 045821 216 IRCSASAATSHVCALVYEPSTDSW----LHADANMASGWRGPAVVVDDA-LYVLDQSSGTKLMMWQKESREWSPVGRLST 290 (352)
Q Consensus 216 v~GG~~~~~~~~~i~~yd~~~~~W----~~~~~~~~~~~~~~~~~~~~~-l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~ 290 (352)
+.+... ..+..||+.+.+. ..++.. ..-...++.-+++ ||+..... ..+.+||+++++...+...+.
T Consensus 192 v~~~~~-----~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~-~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 192 VANLIG-----NSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTEST-VDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp EEETTT-----TEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECSSE-EEEEEEETTTTEEEEEEEEEC
T ss_pred EEeCCC-----CeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEcCC-CEEEEEECCCCceeeeccccc
Confidence 875322 3688899887664 222211 1111222333555 66554432 379999999988755543222
Q ss_pred Cc---CCCC-----ceEEEeCCEEEEEcCCc-eEEEEEcCCcccccceEEeccCCCCCCCCcceeeE
Q 045821 291 LL---TRPP-----CKLVAIGKTIFVIGKGC-SAVVIDVGNIGNIGGIMVSSSIPKLNDNDDIISCK 348 (352)
Q Consensus 291 ~~---~~~~-----~~~~~~~~~i~v~gG~~-~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 348 (352)
.. .... .++..-+..||+.+... .+.+||+.... ...+.++..+..++.|+
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~-------~~~~~~~~~~g~~~~~~ 323 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV-------VGYVAGIEANGGIAICH 323 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE-------EEECTTCCCBSCEEECC
T ss_pred ccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc-------ccceecccccCCeEEEC
Confidence 10 0111 12223345677776544 57789987633 12244555566666654
No 62
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.35 E-value=0.029 Score=49.41 Aligned_cols=237 Identities=9% Similarity=0.085 Sum_probs=108.2
Q ss_pred CCEEEEEEecC-CCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDN-KLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~-~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
+..||+....+ ..+....|.+|+ .++....+...+. .......++.-++.+|+... ....+.+|+..++
T Consensus 61 g~~l~~~~~~~~~~~~v~~~~~~~--~~g~~~~~~~~~~--~~~~p~~~~~dg~~l~~~~~------~~~~v~~~~~~~~ 130 (361)
T 3scy_A 61 GKFVYSVNEFSKDQAAVSAFAFDK--EKGTLHLLNTQKT--MGADPCYLTTNGKNIVTANY------SGGSITVFPIGQD 130 (361)
T ss_dssp SSEEEEEECCSSTTCEEEEEEEET--TTTEEEEEEEEEC--SSSCEEEEEECSSEEEEEET------TTTEEEEEEBCTT
T ss_pred CCEEEEEEccCCCCCcEEEEEEeC--CCCcEEEeeEecc--CCCCcEEEEECCCEEEEEEC------CCCEEEEEEeCCC
Confidence 45677665431 234566777787 7777776655431 11112223333445666542 2356788887643
Q ss_pred e-eEecCC-------CCCc-c----eeeeeEEE-CC-EEEEEeCCCCCCceEEEeCCCCc-------EEEe-----cCCC
Q 045821 147 T-WTDAAP-------MSTA-R----CYFPCGVL-NQ-KIYCIGGLGDTHSWDVYDPRTNN-------WKLH-----TEPN 199 (352)
Q Consensus 147 ~-W~~~~~-------~~~~-r----~~~~~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~~-------W~~~-----~~~~ 199 (352)
. ...+.. -+.+ | ..+.++.. ++ .+|+.+... ..+.+|+..... .... ...+
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 208 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT--DQIHKFNINPNANADNKEKFLTKGTPEAFKVA 208 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTTCCTTTCCCCEEEEEEEEEECC
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC--CEEEEEEEcCCCCcccccceeecccccceecC
Confidence 2 111110 0110 0 11223332 45 577765322 567777665443 2111 0111
Q ss_pred CcccceeEEE-ECC-EEEEEccCCCCCCceEEEEEeCCCCceeecCC---CCCCCCCCcEEE--ECCE-EEEEecCCCCe
Q 045821 200 IFTEIEDSFV-MDG-KIYIRCSASAATSHVCALVYEPSTDSWLHADA---NMASGWRGPAVV--VDDA-LYVLDQSSGTK 271 (352)
Q Consensus 200 ~~~~~~~~~~-~~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~---~~~~~~~~~~~~--~~~~-l~~~gg~~~~~ 271 (352)
......+.+. -+| .+|+.+... ..+..||..+++...+.. ..........+. -+++ ||+.+......
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIG-----GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTT-----CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCC-----CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 1111112222 355 477764222 257777777776654422 111111111222 3555 55544331337
Q ss_pred EEEEeC--CCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-CCceEEEEEcC
Q 045821 272 LMMWQK--ESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG-KGCSAVVIDVG 321 (352)
Q Consensus 272 v~~yd~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g-G~~~~~~~d~~ 321 (352)
+.+|+. .++++..+...+....-...++..-+..||+.+ ....+.+|++.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 777766 467777666544311111122222234577766 34456675554
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.34 E-value=0.027 Score=50.56 Aligned_cols=193 Identities=9% Similarity=0.054 Sum_probs=94.2
Q ss_pred EEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcE
Q 045821 116 EVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNW 192 (352)
Q Consensus 116 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W 192 (352)
...++.+++.|+. ...+.+||..+.. -..+.....+ -.+++.. ++..++.|+.+ ..+.+||..+..-
T Consensus 182 ~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~ 251 (401)
T 4aez_A 182 LSWNRHVLSSGSR------SGAIHHHDVRIANHQIGTLQGHSSE--VCGLAWRSDGLQLASGGND--NVVQIWDARSSIP 251 (401)
T ss_dssp EEEETTEEEEEET------TSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTTSSEEEEEETT--SCEEEEETTCSSE
T ss_pred EEECCCEEEEEcC------CCCEEEEecccCcceeeEEcCCCCC--eeEEEEcCCCCEEEEEeCC--CeEEEccCCCCCc
Confidence 3335556666653 3567888887432 1122111111 1111222 56677777765 6789999987653
Q ss_pred EEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECCE-EEEEecC
Q 045821 193 KLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDDA-LYVLDQS 267 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~-l~~~gg~ 267 (352)
...-... .......... +..+++.|+.. ....+..||..+.+-...-. .......+. -+++ ++..+|.
T Consensus 252 ~~~~~~~-~~~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 252 KFTKTNH-NAAVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVNTVD---AGSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp EEEECCC-SSCCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECT
T ss_pred cEEecCC-cceEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEEEEe---CCCcEEEEEECCCCCeEEEEeec
Confidence 3221111 1111122222 34677775421 11258888887765432211 011111122 2444 4444454
Q ss_pred CCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCce-EEEEEcCCccc
Q 045821 268 SGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCS-AVVIDVGNIGN 325 (352)
Q Consensus 268 ~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~-~~~~d~~~~~w 325 (352)
....+.+||..+.....+..++.............+++.++.|+.+. +.+||+....-
T Consensus 325 ~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 325 PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 44499999998887776654332111212222233566666666554 55899876553
No 64
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.33 E-value=0.035 Score=54.85 Aligned_cols=212 Identities=7% Similarity=0.049 Sum_probs=115.6
Q ss_pred EEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCC----Ccce
Q 045821 85 CYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMS----TARC 159 (352)
Q Consensus 85 ~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~----~~r~ 159 (352)
++.||+ .++.+..+...........-.++..- ++.|++... ..+++||+.+++|..+.... .+..
T Consensus 429 l~~~d~--~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 429 LSILHR--NSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp EEEEET--TTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred eeEEeC--CCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEccccccccccCCc
Confidence 566777 77777666532110011111222222 456766432 34799999999998775331 1111
Q ss_pred e-eeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC---CCCccc-ceeEEE--ECCEEEEEccCCCCCCceEEEE
Q 045821 160 Y-FPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE---PNIFTE-IEDSFV--MDGKIYIRCSASAATSHVCALV 231 (352)
Q Consensus 160 ~-~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~---~~~~~~-~~~~~~--~~g~iyv~GG~~~~~~~~~i~~ 231 (352)
. .+...- ++.+++... ..+.+||+.++.+ .... ...... ...+.. .+|+|++... . .+.+
T Consensus 499 ~i~~i~~d~~g~lWigt~----~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~------Gl~~ 566 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE----EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E------GFYC 566 (795)
T ss_dssp CEEEEEECTTCCEEEEES----SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S------CEEE
T ss_pred eEEEEEECCCCCEEEEeC----CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C------Ccee
Confidence 1 122222 567887654 4588999999888 4431 111111 111222 2678888532 1 3889
Q ss_pred EeCCCCceeecCCC--CCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEcc---CCCCCcCCCCceEEEe-C
Q 045821 232 YEPSTDSWLHADAN--MASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPVG---RLSTLLTRPPCKLVAI-G 303 (352)
Q Consensus 232 yd~~~~~W~~~~~~--~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~---~~~~~~~~~~~~~~~~-~ 303 (352)
||+.++++...... .+... ..++.. +|.|++.+.. .+.+||++++++.... .++..... ..+++.. +
T Consensus 567 ~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~~---Gl~~~~~~~~~~~~~~~~dGl~~~~f~-~~~~~~~~~ 641 (795)
T 4a2l_A 567 FNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTNR---GISCFNPETEKFRNFTESDGLQSNQFN-TASYCRTSV 641 (795)
T ss_dssp EETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEETT---EEEEEETTTTEEEEECGGGTCSCSCEE-EEEEEECTT
T ss_pred ECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcCC---ceEEEcCCCCcEEEcCCcCCCccccCc-cCceeECCC
Confidence 99999988876431 11111 112222 5677776632 7999999999988664 23321111 1233333 4
Q ss_pred CEEEEEcCCceEEEEEcCCcc
Q 045821 304 KTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 304 ~~i~v~gG~~~~~~~d~~~~~ 324 (352)
+.|| +|+......|+++...
T Consensus 642 G~l~-~g~~~Gl~~~~p~~~~ 661 (795)
T 4a2l_A 642 GQMY-FGGINGITTFRPELLL 661 (795)
T ss_dssp SCEE-EEETTEEEEECGGGCC
T ss_pred CeEE-EecCCceEEEcHHHcc
Confidence 5544 5667788889987644
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.0074 Score=53.17 Aligned_cols=191 Identities=7% Similarity=-0.007 Sum_probs=98.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--C--CEEEEEeCCCCCCceEEEeCCCCcEEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--N--QKIYCIGGLGDTHSWDVYDPRTNNWKL 194 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~gG~~~~~~v~~yd~~t~~W~~ 194 (352)
++..++.|+.+ ..+.+||....++..+..+......-....+ + +.+++.|+.+ ..+.+||..+++|..
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~ 93 (379)
T 3jrp_A 22 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--GKVLIWKEENGRWSQ 93 (379)
T ss_dssp SSSEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--SCEEEEEEETTEEEE
T ss_pred CCCEEEEEECC------CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC--CEEEEEEcCCCceeE
Confidence 34555556532 3477788776666554433321111122222 2 5666667655 678999999998776
Q ss_pred ecCCCCcccceeEEEE--C--CEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE-------------
Q 045821 195 HTEPNIFTEIEDSFVM--D--GKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV------------- 257 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~--~--g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~------------- 257 (352)
+............+.+ + +.+++.|+.++ .+..||..+..-...............+..
T Consensus 94 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 94 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred eeeecCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 6543322222222222 3 56667665543 577888766532111000000100111111
Q ss_pred --CCEEEEEecCCCCeEEEEeCCCCc--eEEccCCCCCcCCCCceEEE-eC---CEEEEEcCCce-EEEEEcCCcc
Q 045821 258 --DDALYVLDQSSGTKLMMWQKESRE--WSPVGRLSTLLTRPPCKLVA-IG---KTIFVIGKGCS-AVVIDVGNIG 324 (352)
Q Consensus 258 --~~~l~~~gg~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~-~~---~~i~v~gG~~~-~~~~d~~~~~ 324 (352)
++.+++.|+.++ .+.+||..++. +..+..+... .....++.. .+ +.+++.|+.+. +.+||+....
T Consensus 169 ~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 169 TKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp -CTTCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCCCEEEEEeCCC-eEEEEEecCCCcceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 467777887766 88999886543 5444333221 111122222 23 67777776554 6689988754
No 66
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.32 E-value=0.014 Score=50.68 Aligned_cols=232 Identities=8% Similarity=-0.018 Sum_probs=111.3
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEE-ECC-EEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEV-LGK-NAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
.+.+|+.... .-.+.++|+ .++........+. ... .++. .++ .+|+.+.. ...++++|+.+
T Consensus 9 ~~~~~v~~~~----~~~v~~~d~--~~~~~~~~~~~~~---~~~--~~~~s~dg~~l~~~~~~------~~~i~~~d~~~ 71 (331)
T 3u4y_A 9 SNFGIVVEQH----LRRISFFST--DTLEILNQITLGY---DFV--DTAITSDCSNVVVTSDF------CQTLVQIETQL 71 (331)
T ss_dssp CCEEEEEEGG----GTEEEEEET--TTCCEEEEEECCC---CEE--EEEECSSSCEEEEEEST------TCEEEEEECSS
T ss_pred CCEEEEEecC----CCeEEEEeC--cccceeeeEEccC---Ccc--eEEEcCCCCEEEEEeCC------CCeEEEEECCC
Confidence 5678877543 235667798 8887765544431 111 2222 244 57777642 34789999988
Q ss_pred Cee--EecCCCCCcceeeeeEEE-C-CEEEEEeCCCC-CCceEEEeCCCCcEEEecCCCCcccceeEEE-ECC-EEEEEc
Q 045821 146 NTW--TDAAPMSTARCYFPCGVL-N-QKIYCIGGLGD-THSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDG-KIYIRC 218 (352)
Q Consensus 146 ~~W--~~~~~~~~~r~~~~~~~~-~-~~iyv~gG~~~-~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g-~iyv~G 218 (352)
++. ..+.....+. ++++.. + ..+| .+.... ...+.+||..+++-...-+. .......+. -+| .+|+.+
T Consensus 72 ~~~~~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 72 EPPKVVAIQEGQSSM--ADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILID 146 (331)
T ss_dssp SSCEEEEEEECSSCC--CCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEE
T ss_pred CceeEEecccCCCCc--cceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEe
Confidence 764 2222111221 212222 3 4566 332221 13899999998875443212 111122222 255 478774
Q ss_pred cCCCCCCceEEEEEeCCCC-ceeec-CCCCCCCCCCcE--EEECCE-EEEEecCCCCeEEEEeCCCCce-EEccCCCCCc
Q 045821 219 SASAATSHVCALVYEPSTD-SWLHA-DANMASGWRGPA--VVVDDA-LYVLDQSSGTKLMMWQKESREW-SPVGRLSTLL 292 (352)
Q Consensus 219 G~~~~~~~~~i~~yd~~~~-~W~~~-~~~~~~~~~~~~--~~~~~~-l~~~gg~~~~~v~~yd~~~~~W-~~~~~~~~~~ 292 (352)
.... . .+..|+...+ .-... ............ +.-+++ +|+.+...+ .+.+||+.+.+. ..+..++...
T Consensus 147 ~~~~---~-~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~-~v~v~d~~~~~~~~~~~~~~~~~ 221 (331)
T 3u4y_A 147 RSSA---N-TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN-SIGILETQNPENITLLNAVGTNN 221 (331)
T ss_dssp ETTT---T-EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT-EEEEEECSSTTSCEEEEEEECSS
T ss_pred cCCC---c-eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC-eEEEEECCCCcccceeeeccCCC
Confidence 3321 1 1445554322 11111 000011111112 223554 666654443 899999987765 1122222211
Q ss_pred CCCCceEEEeCCEEEEEcCC-ceEEEEEcCCcccc
Q 045821 293 TRPPCKLVAIGKTIFVIGKG-CSAVVIDVGNIGNI 326 (352)
Q Consensus 293 ~~~~~~~~~~~~~i~v~gG~-~~~~~~d~~~~~w~ 326 (352)
.-...++..-+..+|+.... ..+.++|+++....
T Consensus 222 ~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~ 256 (331)
T 3u4y_A 222 LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS 256 (331)
T ss_dssp CCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE
T ss_pred CCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee
Confidence 11112222224457777643 34668998876653
No 67
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.32 E-value=0.034 Score=50.37 Aligned_cols=222 Identities=9% Similarity=-0.053 Sum_probs=110.6
Q ss_pred eeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeee
Q 045821 83 VCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFP 162 (352)
Q Consensus 83 ~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~ 162 (352)
..++++|. ....-..+..... .........+++.+++++.+. ....++++|..+++...+...+.. ..+
T Consensus 159 ~~i~i~d~--~g~~~~~l~~~~~----~v~~~~~Spdg~~la~~s~~~---~~~~i~~~d~~tg~~~~l~~~~~~--~~~ 227 (415)
T 2hqs_A 159 YELRVSDY--DGYNQFVVHRSPQ----PLMSPAWSPDGSKLAYVTFES---GRSALVIQTLANGAVRQVASFPRH--NGA 227 (415)
T ss_dssp EEEEEEET--TSCSCEEEEEESS----CEEEEEECTTSSEEEEEECTT---SSCEEEEEETTTCCEEEEECCSSC--EEE
T ss_pred ceEEEEcC--CCCCCEEEeCCCC----cceeeEEcCCCCEEEEEEecC---CCcEEEEEECCCCcEEEeecCCCc--ccC
Confidence 46777787 6555444443221 111111222455445544322 236899999999887665543321 112
Q ss_pred eEEE-CC-EEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee
Q 045821 163 CGVL-NQ-KIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL 240 (352)
Q Consensus 163 ~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~ 240 (352)
.+.. ++ .|++.+..+....++.+|..+.+.+.+..... .....+..-+|+..++++.. .....++.+|..+.+-.
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~spdg~~l~~~s~~--~g~~~i~~~d~~~~~~~ 304 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS-NNTEPTWFPDSQNLAFTSDQ--AGRPQVYKVNINGGAPQ 304 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS-CEEEEEECTTSSEEEEEECT--TSSCEEEEEETTSSCCE
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC-cccceEECCCCCEEEEEECC--CCCcEEEEEECCCCCEE
Confidence 2222 45 45555544333679999999988766543221 11111222266644443322 12346889999887655
Q ss_pred ecCCCCCCCCCCcEEEECCEEEEEecCC-C-CeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCc----e
Q 045821 241 HADANMASGWRGPAVVVDDALYVLDQSS-G-TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC----S 314 (352)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~~gg~~-~-~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~----~ 314 (352)
.+.... .........-+++.+++++.. + ..++++|..+++...+.... .........+++.+++++.. .
T Consensus 305 ~l~~~~-~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 305 RITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGMGSV 379 (415)
T ss_dssp ECCCSS-SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEETTEEE
T ss_pred EEecCC-CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCCccE
Confidence 543211 000011122355544444332 2 47999999998886654321 11111222355544444322 4
Q ss_pred EEEEEcCCc
Q 045821 315 AVVIDVGNI 323 (352)
Q Consensus 315 ~~~~d~~~~ 323 (352)
.+++|+...
T Consensus 380 l~~~d~~g~ 388 (415)
T 2hqs_A 380 LNLVSTDGR 388 (415)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCCC
Confidence 667887643
No 68
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.30 E-value=0.0026 Score=56.11 Aligned_cols=146 Identities=11% Similarity=0.071 Sum_probs=75.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCccee-eeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCY-FPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+++.|+. ...+.+||..++++..+..+...... .+++.. ++..++.|+.+ ..+.+||..+.++....
T Consensus 19 ~~~~l~~~~~------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 19 DRTQIAICPN------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD--RNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp TSSEEEEECS------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT--SCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEeC------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC--CeEEEEECCCCeeeeeE
Confidence 4556666653 35688999988876555443321111 122222 56666666654 67899999888876543
Q ss_pred CCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCc-eeecCCC-CCCCCCCcEEE--ECCEEEEEecCCCC
Q 045821 197 EPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDS-WLHADAN-MASGWRGPAVV--VDDALYVLDQSSGT 270 (352)
Q Consensus 197 ~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~-W~~~~~~-~~~~~~~~~~~--~~~~l~~~gg~~~~ 270 (352)
...........+.+ ++++++.|+.++ .+..||..+.. |...... ......-..+. .++.+++.|+.++
T Consensus 91 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg- 164 (372)
T 1k8k_C 91 VILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF- 164 (372)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-
T ss_pred EeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC-
Confidence 22222222222222 566677665442 24455544332 3222111 11111111222 2667777777666
Q ss_pred eEEEEeCC
Q 045821 271 KLMMWQKE 278 (352)
Q Consensus 271 ~v~~yd~~ 278 (352)
.+.+||..
T Consensus 165 ~i~~~d~~ 172 (372)
T 1k8k_C 165 KCRIFSAY 172 (372)
T ss_dssp CEEEEECC
T ss_pred CEEEEEcc
Confidence 89999964
No 69
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.29 E-value=0.022 Score=50.21 Aligned_cols=239 Identities=8% Similarity=0.029 Sum_probs=108.7
Q ss_pred CEEEEEEecCC--CCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECC-EEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 69 TWIYAFCRDNK--LERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGK-NAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 69 ~~l~~~gg~~~--~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
...+++|.... ......+.+|+ .++.+..+.... .....+....-++ .||+.+..... ...-.+|.+|..+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~--~~g~~~~~~~~~---~~~p~~l~~spdg~~l~~~~~~~~~-~~~v~~~~~~~~~ 86 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNE--ETGESLPLSDAE---VANPSYLIPSADGKFVYSVNEFSKD-QAAVSAFAFDKEK 86 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEET--TTCCEEEEEEEE---CSCCCSEEECTTSSEEEEEECCSST-TCEEEEEEEETTT
T ss_pred ceEEEEEeccCCCCCCEEEEEEeC--CCCCEEEeeccc---CCCCceEEECCCCCEEEEEEccCCC-CCcEEEEEEeCCC
Confidence 33444665432 33566777888 888887766542 1222222222334 57766542111 1122335556666
Q ss_pred CeeEecCCCCCc-ceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCc-EEEec----C---CCCc----ccceeEEEE--
Q 045821 146 NTWTDAAPMSTA-RCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN-WKLHT----E---PNIF----TEIEDSFVM-- 210 (352)
Q Consensus 146 ~~W~~~~~~~~~-r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~-W~~~~----~---~~~~----~~~~~~~~~-- 210 (352)
++.+.+...+.. ......+.-+..+|+....+ ..+.+|+..++. ...+. . -+.+ ....+.+.+
T Consensus 87 g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~--~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp 164 (361)
T 3scy_A 87 GTLHLLNTQKTMGADPCYLTTNGKNIVTANYSG--GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP 164 (361)
T ss_dssp TEEEEEEEEECSSSCEEEEEECSSEEEEEETTT--TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT
T ss_pred CcEEEeeEeccCCCCcEEEEECCCEEEEEECCC--CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC
Confidence 777666544321 12222223234566655322 678888886542 11110 0 0000 011122233
Q ss_pred CCE-EEEEccCCCCCCceEEEEEeCCCCc-------eee------cCCCCCCCCCCcEEEECCE-EEEEecCCCCeEEEE
Q 045821 211 DGK-IYIRCSASAATSHVCALVYEPSTDS-------WLH------ADANMASGWRGPAVVVDDA-LYVLDQSSGTKLMMW 275 (352)
Q Consensus 211 ~g~-iyv~GG~~~~~~~~~i~~yd~~~~~-------W~~------~~~~~~~~~~~~~~~~~~~-l~~~gg~~~~~v~~y 275 (352)
+|+ ||+.+... ..+..|+..... ... ........-.+.++.-+++ +|+.+... ..+.+|
T Consensus 165 dg~~l~~~~~~~-----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-~~v~v~ 238 (361)
T 3scy_A 165 DGKYLLADDLGT-----DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG-GTVIAF 238 (361)
T ss_dssp TSSEEEEEETTT-----TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-CEEEEE
T ss_pred CCCEEEEEeCCC-----CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC-CeEEEE
Confidence 564 77764221 245566544332 211 1111111111112233554 66655333 389999
Q ss_pred eCCCCceEEccCCCCCcC--CCCceEEE-eC-CEEEEEcCC--ceEEEEEcC
Q 045821 276 QKESREWSPVGRLSTLLT--RPPCKLVA-IG-KTIFVIGKG--CSAVVIDVG 321 (352)
Q Consensus 276 d~~~~~W~~~~~~~~~~~--~~~~~~~~-~~-~~i~v~gG~--~~~~~~d~~ 321 (352)
|..++++..+..++.... .....++. .+ ..||+.+.. ..+.+|++.
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 998887765543321100 11112222 24 457776543 467788875
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.28 E-value=0.023 Score=50.96 Aligned_cols=190 Identities=13% Similarity=0.113 Sum_probs=94.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-----cCCCCCcceeeeeEEE--CC-EEEEEeCCCCCCceEEEeCCCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-----AAPMSTARCYFPCGVL--NQ-KIYCIGGLGDTHSWDVYDPRTN 190 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-----~~~~~~~r~~~~~~~~--~~-~iyv~gG~~~~~~v~~yd~~t~ 190 (352)
++.+++.|+.+ ..+.+||..++.... +..+......-..+.+ ++ .+++.|+.+ ..+.+||..+.
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d--g~i~iwd~~~~ 164 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD--NVILVWDVGTG 164 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT--SCEEEEETTTT
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC--CEEEEEECCCC
Confidence 45666666542 468888988764321 1111100111111222 33 466667655 67899999988
Q ss_pred cEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecC-CCCCCC-CCCcEEEECCEEEEEe-
Q 045821 191 NWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHAD-ANMASG-WRGPAVVVDDALYVLD- 265 (352)
Q Consensus 191 ~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~-~~~~~~-~~~~~~~~~~~l~~~g- 265 (352)
+....-...........+.+ ++.+++.|+.++ .+..||+.+.+-...- ...... ........++++++.|
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 239 (402)
T 2aq5_A 165 AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGF 239 (402)
T ss_dssp EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEE
T ss_pred CccEEEecCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEec
Confidence 65432210111111122222 677777765542 6888998876543221 111111 1112233477877777
Q ss_pred --cCCCCeEEEEeCCCCce-EEccCCCCCcCCCCceEE--EeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 266 --QSSGTKLMMWQKESREW-SPVGRLSTLLTRPPCKLV--AIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 266 --g~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~--~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
+.++ .+.+||..+..- .....+... .....+. ..+..+++.|+.+ .+.+||+....
T Consensus 240 ~~~~d~-~i~iwd~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 240 SRMSER-QVALWDTKHLEEPLSLQELDTS--SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CTTCCE-EEEEEETTBCSSCSEEEECCCC--SSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred cCCCCc-eEEEEcCccccCCceEEeccCC--CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 3333 899999886432 111111111 1112222 2245566777544 56789988755
No 71
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.26 E-value=0.018 Score=48.48 Aligned_cols=145 Identities=11% Similarity=-0.002 Sum_probs=93.4
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT 147 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~ 147 (352)
++.||+..|.... +..+|+ .+++-..-. ++ ......+++..+++||+... ..+.+++||+.+.+
T Consensus 64 ~~~Ly~stG~~g~----v~~iD~--~Tgkv~~~~-l~---~~~FgeGit~~g~~Ly~ltw------~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 64 QGHFFESTGHQGT----LRQLSL--ESAQPVWME-RL---GNIFAEGLASDGERLYQLTW------TEGLLFTWSGMPPQ 127 (268)
T ss_dssp TTEEEEEETTTTE----EEECCS--SCSSCSEEE-EC---TTCCEEEEEECSSCEEEEES------SSCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCE----EEEEEC--CCCcEEeEE-CC---CCcceeEEEEeCCEEEEEEc------cCCEEEEEECCcCc
Confidence 6889988775322 777899 877654433 44 23344567888999999854 24679999999876
Q ss_pred eE-ecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEE-EecC--CCCcc-cceeEEEECCEEEEEccCCC
Q 045821 148 WT-DAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWK-LHTE--PNIFT-EIEDSFVMDGKIYIRCSASA 222 (352)
Q Consensus 148 W~-~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~-~~~~--~~~~~-~~~~~~~~~g~iyv~GG~~~ 222 (352)
-. .++ .+....+++.-++++|+.-|. +.+..+|+.|.+-. .+.- -+.+. .-......+|+||+--
T Consensus 128 ~~~ti~---~~~eGwGLt~Dg~~L~vSdGs---~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv---- 197 (268)
T 3nok_A 128 RERTTR---YSGEGWGLCYWNGKLVRSDGG---TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI---- 197 (268)
T ss_dssp EEEEEE---CSSCCCCEEEETTEEEEECSS---SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE----
T ss_pred EEEEEe---CCCceeEEecCCCEEEEECCC---CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE----
Confidence 33 333 233456777778899998763 78999999987532 2321 11111 1122334589999752
Q ss_pred CCCceEEEEEeCCCCce
Q 045821 223 ATSHVCALVYEPSTDSW 239 (352)
Q Consensus 223 ~~~~~~i~~yd~~~~~W 239 (352)
...+.|.+.|+.+++-
T Consensus 198 -w~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 198 -WHSSDVLEIDPATGTV 213 (268)
T ss_dssp -TTCSEEEEECTTTCBE
T ss_pred -CCCCeEEEEeCCCCcE
Confidence 1234788999988764
No 72
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.25 E-value=0.022 Score=56.26 Aligned_cols=172 Identities=9% Similarity=0.010 Sum_probs=99.7
Q ss_pred CeEEEEECCCCeeEecCCCCCc-ceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCc---ccceeEEE-
Q 045821 136 SEVYCYDASMNTWTDAAPMSTA-RCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIF---TEIEDSFV- 209 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~~~~~~~~-r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~---~~~~~~~~- 209 (352)
..+++||+.+++++.+.....+ ..-.+.+.- ++.|++... ..+.+||+.+++|+........ ........
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 4588999999998877532111 111222222 578877654 4689999999988776532210 11111222
Q ss_pred -ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCC-cEEEE--CCEEEEEecCCCCeE-EEEeCCCCceEE
Q 045821 210 -MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRG-PAVVV--DDALYVLDQSSGTKL-MMWQKESREWSP 284 (352)
Q Consensus 210 -~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~-~~~~~--~~~l~~~gg~~~~~v-~~yd~~~~~W~~ 284 (352)
-+|+|++..... .+.+||+.+++++............ ..+.. +|.|++-.. . .+ .+||++++++..
T Consensus 503 d~~g~lWigt~~~------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~--Glv~~~d~~~~~~~~ 573 (781)
T 3v9f_A 503 DSEGRFWIGTFGG------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-E--GLVCFPSARNFDYQV 573 (781)
T ss_dssp CTTCCEEEEESSS------CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-T--EEEEESCTTTCCCEE
T ss_pred cCCCCEEEEEcCC------CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-C--CceEEECCCCCcEEE
Confidence 267888853212 3889999999988775321111111 12222 566776543 3 57 999999998876
Q ss_pred cc---CCCCCcCCCCceEEEe-CCEEEEEcCCceEEEEEcCCcc
Q 045821 285 VG---RLSTLLTRPPCKLVAI-GKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 285 ~~---~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
.. .++.. ...+++.- ++.|++-+ ......||+++..
T Consensus 574 ~~~~~gl~~~---~i~~i~~d~~g~lW~~t-~~Gl~~~~~~~~~ 613 (781)
T 3v9f_A 574 FQRKEGLPNT---HIRAISEDKNGNIWAST-NTGISCYITSKKC 613 (781)
T ss_dssp ECGGGTCSCC---CCCEEEECSSSCEEEEC-SSCEEEEETTTTE
T ss_pred ccccCCCCCc---eEEEEEECCCCCEEEEc-CCceEEEECCCCc
Confidence 64 24332 22344433 56777765 4567778887654
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.23 E-value=0.0022 Score=56.91 Aligned_cols=235 Identities=11% Similarity=0.048 Sum_probs=104.6
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.+++.|+. .+... +||. .++.|..+..+.. .........+ ++..++.|+.+ ..+.+||..+
T Consensus 22 ~g~~l~~~~~--d~~i~--iw~~--~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTA--TNQVE--LYEQ--DGNGWKHARTFSD---HDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCS--SSCBC--EEEE--ETTEEEECCCBCC---CSSCEEEEEECTTTCCEEEEETT------SSEEEC----
T ss_pred CCCEEEEecC--CCEEE--EEEc--cCCceEEEEEEec---CCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCC
Confidence 4555556543 23333 4466 6666666655542 1112222222 45566666543 4578888887
Q ss_pred Ce-eEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc-EEEecCCCCccc-ce-eEEE-ECCEEEEEc
Q 045821 146 NT-WTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN-WKLHTEPNIFTE-IE-DSFV-MDGKIYIRC 218 (352)
Q Consensus 146 ~~-W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~-W~~~~~~~~~~~-~~-~~~~-~~g~iyv~G 218 (352)
++ |.....+.........+.+ +++.++.|+.+ ..+.+||..+.+ |..+..+...+. .. .+.. -++++++.|
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA--RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS--SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecC--CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 76 4333222111111112222 45666666654 678889988764 322222222111 11 2222 266777776
Q ss_pred cCCCCCCceEEEEEeCCCCceee----------------cCCCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCC
Q 045821 219 SASAATSHVCALVYEPSTDSWLH----------------ADANMASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 219 G~~~~~~~~~i~~yd~~~~~W~~----------------~~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
+.++ .+..||..+..... +... .+...-..+. -++++++.|+.++ .+.+||..+.
T Consensus 165 ~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-~i~iwd~~~~ 237 (377)
T 3dwl_C 165 CADR-----KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-SVTIAYPSAP 237 (377)
T ss_dssp ESSS-----CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-EEC-CEECST
T ss_pred eCCC-----EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-cEEEEECCCC
Confidence 5542 36667764332211 1111 1110011122 2667777777666 8999998876
Q ss_pred ce--EEccCCCCCcCCCCceEEEeCCEEEEEcCCceEEEEEcCCcccc
Q 045821 281 EW--SPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCSAVVIDVGNIGNI 326 (352)
Q Consensus 281 ~W--~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~d~~~~~w~ 326 (352)
+- ..+..+..............++++++.|+.....+|+.....|.
T Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~ 285 (377)
T 3dwl_C 238 EQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWA 285 (377)
T ss_dssp TSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---C
T ss_pred CCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceE
Confidence 53 11222221101111222335788888887777778887765554
No 74
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.23 E-value=0.096 Score=46.85 Aligned_cols=184 Identities=9% Similarity=-0.014 Sum_probs=93.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCee-EecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTW-TDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W-~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+++.|+. ...+.+||..+.+- ..+..... .-.+++.. ++..++.|+.+ ..+.+||..+.+-...-
T Consensus 150 ~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 150 SGEALISSSQ------DMQLKIWSVKDGSNPRTLIGHRA--TVTDIAIIDRGRNVLSASLD--GTIRLWECGTGTTIHTF 219 (420)
T ss_dssp TSSEEEEEET------TSEEEEEETTTCCCCEEEECCSS--CEEEEEEETTTTEEEEEETT--SCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeC------CCeEEEEeCCCCcCceEEcCCCC--cEEEEEEcCCCCEEEEEcCC--CcEEEeECCCCceeEEe
Confidence 4555566653 34688899876642 11111111 11122222 55666666655 67889999877533221
Q ss_pred CCCC-cccce-eEE----------------------EECCEEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCCCCCC
Q 045821 197 EPNI-FTEIE-DSF----------------------VMDGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMASGWR 251 (352)
Q Consensus 197 ~~~~-~~~~~-~~~----------------------~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~ 251 (352)
.... ..... ..+ .-++++.+.|+.++ .+..||..+.+-.. +..... ..
T Consensus 220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~--~~ 292 (420)
T 3vl1_A 220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQLPSKFT--CS 292 (420)
T ss_dssp CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEECCTTS--SC
T ss_pred ecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEcccccC--CC
Confidence 1111 11100 111 12567777765543 47888887665322 211111 11
Q ss_pred CcEEE--ECCE-EEEEecCCCCeEEEEeCCCCce--EEccCCCCCcCCCCceEEEeCCEEEEEcCCce-EEEEEcCCc
Q 045821 252 GPAVV--VDDA-LYVLDQSSGTKLMMWQKESREW--SPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCS-AVVIDVGNI 323 (352)
Q Consensus 252 ~~~~~--~~~~-l~~~gg~~~~~v~~yd~~~~~W--~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~-~~~~d~~~~ 323 (352)
...+. -++. +++.|+.++ .+.+||..+..- ..+..-. .....++...++++++.|+.+. +.++|+...
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg-~i~vwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENG-MLAQWDLRSPECPVGEFLINE---GTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTS-EEEEEETTCTTSCSEEEEEST---TSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred ceeEEEeCCCCCEEEEEeCCC-eEEEEEcCCCcCchhhhhccC---CCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 11222 2454 777777666 899999987532 2222111 1222344455788888887765 557887763
No 75
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.22 E-value=0.052 Score=47.15 Aligned_cols=147 Identities=12% Similarity=0.144 Sum_probs=76.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.|+. ...+.+||..+++-...-.... ..-.+++.. +++.++.|+.+ ..+.+||..+.+-...-.
T Consensus 133 dg~~l~~g~~------dg~v~i~~~~~~~~~~~~~~~~-~~v~~~~~spdg~~lasg~~d--g~i~iwd~~~~~~~~~~~ 203 (321)
T 3ow8_A 133 DSQYLATGTH------VGKVNIFGVESGKKEYSLDTRG-KFILSIAYSPDGKYLASGAID--GIINIFDIATGKLLHTLE 203 (321)
T ss_dssp TSSEEEEECT------TSEEEEEETTTCSEEEEEECSS-SCEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEcC------CCcEEEEEcCCCceeEEecCCC-ceEEEEEECCCCCEEEEEcCC--CeEEEEECCCCcEEEEEc
Confidence 4556666653 3457788887665322111111 111112221 56667777665 678999998875332211
Q ss_pred CCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEE
Q 045821 198 PNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDDALYVLDQSSGTKLMMW 275 (352)
Q Consensus 198 ~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~y 275 (352)
.....-...+..-++++++.|+.++ .+..||..+......-. .+...-..+. .++..++.|+.++ .+.+|
T Consensus 204 ~h~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~D~-~v~iw 275 (321)
T 3ow8_A 204 GHAMPIRSLTFSPDSQLLVTASDDG-----YIKIYDVQHANLAGTLS--GHASWVLNVAFCPDDTHFVSSSSDK-SVKVW 275 (321)
T ss_dssp CCSSCCCEEEECTTSCEEEEECTTS-----CEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTS-CEEEE
T ss_pred ccCCceeEEEEcCCCCEEEEEcCCC-----eEEEEECCCcceeEEEc--CCCCceEEEEECCCCCEEEEEeCCC-cEEEE
Confidence 1111111112223677777765543 47788887665432211 1111111122 2667777777766 89999
Q ss_pred eCCCCce
Q 045821 276 QKESREW 282 (352)
Q Consensus 276 d~~~~~W 282 (352)
|..+.+-
T Consensus 276 d~~~~~~ 282 (321)
T 3ow8_A 276 DVGTRTC 282 (321)
T ss_dssp ETTTTEE
T ss_pred eCCCCEE
Confidence 9987654
No 76
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=97.21 E-value=0.017 Score=52.90 Aligned_cols=200 Identities=12% Similarity=0.198 Sum_probs=110.2
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCc-------
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN------- 191 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~------- 191 (352)
++.+|+|-| +..|.||..+++...-.-...+. --++...++++|++-| +..++||+.+.+
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~~w~gi~~-iDAA~~~~g~~YfFkG----~~y~rfd~~~~~v~~gyPk 224 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKERSWPAVGN-CTSALRWLGRYYCFQG----NQFLRFNPVSGEVPPGYPL 224 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEECCTTSCC-CSEEEEETTEEEEEET----TEEEEECTTTCCCCTTCCE
T ss_pred CCeEEEEec--------ccEEEEecccceeecccCCCCCc-cchheeeCCceEEEEC----CEEEEEcCccCcccCCCCc
Confidence 678899977 56899999887654321111222 2445555799999999 778999987653
Q ss_pred -----EEEecCCCC-------------------cccceeEEE-ECCEEEEEccCCCCCCceEEEEEeCCCCceee--cCC
Q 045821 192 -----WKLHTEPNI-------------------FTEIEDSFV-MDGKIYIRCSASAATSHVCALVYEPSTDSWLH--ADA 244 (352)
Q Consensus 192 -----W~~~~~~~~-------------------~~~~~~~~~-~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~--~~~ 244 (352)
|..++.... .....+++. .+|++|.+-|.. .|++|...+.+.. +..
T Consensus 225 ~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~~-------yWR~~~~~~~~~p~~Is~ 297 (460)
T 1qhu_A 225 DVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGSH-------YWRLDTNRDGWHSWPIAH 297 (460)
T ss_dssp EHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETTE-------EEECTTGGGCCCCEEGGG
T ss_pred chhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCCE-------EEEEecCCCCcCccchhh
Confidence 211111000 001123333 468999986543 7777765433211 111
Q ss_pred CC-C-CCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEcc----------CCCCC--cCCCCceEEE-eCCEEEEE
Q 045821 245 NM-A-SGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVG----------RLSTL--LTRPPCKLVA-IGKTIFVI 309 (352)
Q Consensus 245 ~~-~-~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~----------~~~~~--~~~~~~~~~~-~~~~i~v~ 309 (352)
.. . +..--++...++++|++-|. .+|+|+...+ .+.+. .+|.. ..+-.+++.. ..+++|+|
T Consensus 298 ~WpglP~~IDAAf~~~~~~yfFkG~---~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~~~~ktyfF 373 (460)
T 1qhu_A 298 QWPQGPSTVDAAFSWEDKLYLIQDT---KVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIM 373 (460)
T ss_dssp TCTTSCSSCSEEEEETTEEEEEETT---EEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEE
T ss_pred hccCCCCCCcEEEEECCeEEEEeCC---EEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEEeCCCCEEEEE
Confidence 00 0 01122344568999999876 8999986531 22222 23332 1112233322 46899999
Q ss_pred cCCceEEEEEcCCcccccceEEeccCCCCCCCCcceee
Q 045821 310 GKGCSAVVIDVGNIGNIGGIMVSSSIPKLNDNDDIISC 347 (352)
Q Consensus 310 gG~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 347 (352)
-|. ..+-||.+.. -+ .+....|+++.+.+.+-|
T Consensus 374 kG~-~ywryd~~~~--Pr--~i~~~~~gi~~~vdAaf~ 406 (460)
T 1qhu_A 374 AGR-RLWWLDLKSG--AQ--ATWTELPWPHEKVDGALC 406 (460)
T ss_dssp ETT-EEEEEEGGGG--GG--CCCEEECCSCSCCSEEEE
T ss_pred ECC-EEEEEECCCC--cc--chhhhCCCCCCCcCEEEe
Confidence 875 5667997743 11 122224556666665554
No 77
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.20 E-value=0.045 Score=46.33 Aligned_cols=187 Identities=9% Similarity=0.083 Sum_probs=99.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCC--Cc--ceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMS--TA--RCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNW 192 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~--~~--r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W 192 (352)
++.+|+.+.. ...+.+||+.......+.... .. .....++.. ++.+|+.+.... ..+.+||.....-
T Consensus 40 ~g~l~v~~~~------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~-~~i~~~d~~g~~~ 112 (286)
T 1q7f_A 40 QNDIIVADTN------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT-HQIQIYNQYGQFV 112 (286)
T ss_dssp TCCEEEEEGG------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG-CEEEEECTTSCEE
T ss_pred CCCEEEEECC------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC-CEEEEECCCCcEE
Confidence 4677877532 346888888755444443211 01 122334442 679999874211 6789999655444
Q ss_pred EEecCCCCcccceeEEE-ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECCEEEEEecCCC
Q 045821 193 KLHTEPNIFTEIEDSFV-MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDDALYVLDQSSG 269 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~-~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gg~~~ 269 (352)
+.+... .......+++ -+|++|+..... ..+.+||+.......+.... .......+. -++.+|+.+...+
T Consensus 113 ~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 113 RKFGAT-ILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp EEECTT-TCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEEEGGGT
T ss_pred EEecCc-cCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEEECCCC
Confidence 444321 1111122222 367899985322 36888997655444443211 111111233 3578888765444
Q ss_pred CeEEEEeCCCCceEEccCCCCCcCCCCceEEE-eCCEEEEEcCCc--eEEEEEcCC
Q 045821 270 TKLMMWQKESREWSPVGRLSTLLTRPPCKLVA-IGKTIFVIGKGC--SAVVIDVGN 322 (352)
Q Consensus 270 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~--~~~~~d~~~ 322 (352)
.|.+||+..+....+..... .....+++. .++.||+..... .+.+||++.
T Consensus 186 -~i~~~~~~g~~~~~~~~~g~--~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 186 -CVKVFNYEGQYLRQIGGEGI--TNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp -EEEEEETTCCEEEEESCTTT--SCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred -EEEEEcCCCCEEEEEccCCc--cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 89999997765555532110 111123333 366888877543 677888653
No 78
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.13 E-value=0.051 Score=47.63 Aligned_cols=145 Identities=8% Similarity=0.070 Sum_probs=73.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc-EEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN-WKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~-W~~~ 195 (352)
++..++.|+.+ ..+.+||..++.+..+..+......-..+.+ +++.++.|+.+ ..+.+||..+.. +..+
T Consensus 72 ~g~~l~s~s~D------~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D--~~v~iwd~~~~~~~~~~ 143 (345)
T 3fm0_A 72 CGNYLASASFD------ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD--KSVWVWEVDEEDEYECV 143 (345)
T ss_dssp TSSEEEEEETT------SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT--SCEEEEEECTTSCEEEE
T ss_pred CCCEEEEEECC------CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC--CeEEEEECCCCCCeEEE
Confidence 45566666643 3467778777765544332211111112222 56677777765 678888887643 3333
Q ss_pred cCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECCEEEEEecCCCCe
Q 045821 196 TEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDDALYVLDQSSGTK 271 (352)
Q Consensus 196 ~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~ 271 (352)
..+.........+. -++++++.|+.++ .+..||..++.|..+.....+...-..+. .+++.++.|+.++ .
T Consensus 144 ~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-----~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~-~ 217 (345)
T 3fm0_A 144 SVLNSHTQDVKHVVWHPSQELLASASYDD-----TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR-T 217 (345)
T ss_dssp EEECCCCSCEEEEEECSSSSCEEEEETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-C
T ss_pred EEecCcCCCeEEEEECCCCCEEEEEeCCC-----cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC-e
Confidence 21111111111222 2566777765543 46778877777764322111111111222 3667777777666 7
Q ss_pred EEEEeC
Q 045821 272 LMMWQK 277 (352)
Q Consensus 272 v~~yd~ 277 (352)
+.+||.
T Consensus 218 v~iW~~ 223 (345)
T 3fm0_A 218 VRIWRQ 223 (345)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 777764
No 79
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.13 E-value=0.057 Score=47.20 Aligned_cols=137 Identities=12% Similarity=0.100 Sum_probs=71.1
Q ss_pred CeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEE
Q 045821 136 SEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKI 214 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~i 214 (352)
..+.+||..+++-...-.-..... .+++.. ++.+++.|+.+ ..+.+||..+..-...-......-...+..-++++
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~sg~~d--~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDV-MSLSLAPDTRLFVSGACD--ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCE-EEEEECTTSSEEEEEETT--SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE
T ss_pred CcEEEEECCCCcEEEEEcCCCCce-EEEEECCCCCEEEEEeCC--CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE
Confidence 458889998876432211111111 122222 56777777766 68899999877543321111111111112226777
Q ss_pred EEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEE--EECCEEEEEecCCCCeEEEEeCCCCc
Q 045821 215 YIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAV--VVDDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 215 yv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~--~~~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
++.|+.++ .+..||..+.+-...-...........+ ..++++++.|+.++ .+.+||..+..
T Consensus 241 l~s~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~-~i~vwd~~~~~ 303 (340)
T 1got_B 241 FATGSDDA-----TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF-NCNVWDALKAD 303 (340)
T ss_dssp EEEEETTS-----CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-EEEEEETTTCC
T ss_pred EEEEcCCC-----cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC-eEEEEEcccCc
Confidence 77766553 4778888765432211101100011112 23677777777666 89999987644
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.01 Score=58.45 Aligned_cols=231 Identities=6% Similarity=0.072 Sum_probs=110.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--C--CEEEEEeCCCCCCCCCCeEEEEEC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--G--KNAYLLGGCGWSEDATSEVYCYDA 143 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~ 143 (352)
++..++.|+. .+. +.+||. ...++..+..+.. .........+ + +..++.|+.+ ..+.+||.
T Consensus 20 dg~~latg~~--dg~--I~vwd~--~~~~~~~~~~l~~---h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSS--DKT--IKIFEV--EGETHKLIDTLTG---HEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKE 84 (753)
T ss_dssp SSCCEEEEET--TTE--EEEEEE--ETTEEEEEEEECC---CSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEE
T ss_pred CCCeEEEEEC--CCc--EEEEec--CCCCCccceeccC---CcCceEEEEecCCCCCCEEEEEeCC------CeEEEEEC
Confidence 3445556653 233 344466 5556655554441 1222222332 2 5566666643 45888999
Q ss_pred CCCeeEecCCCCCcceeeeeEEE--C--CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccc-eeEEEE--------
Q 045821 144 SMNTWTDAAPMSTARCYFPCGVL--N--QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEI-EDSFVM-------- 210 (352)
Q Consensus 144 ~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~-~~~~~~-------- 210 (352)
.+++|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+..-............ ......
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d--g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD--GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC--CcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 98887665543322222222222 3 6677777755 6788899877621111000000111 111111
Q ss_pred ------CCEEEEEccCCCCCCceEEEEEeCCC--CceeecCCCCCCCCCCcEEE--EC---CEEEEEecCCCCeEEEEeC
Q 045821 211 ------DGKIYIRCSASAATSHVCALVYEPST--DSWLHADANMASGWRGPAVV--VD---DALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 211 ------~g~iyv~GG~~~~~~~~~i~~yd~~~--~~W~~~~~~~~~~~~~~~~~--~~---~~l~~~gg~~~~~v~~yd~ 277 (352)
++.+++.|+.++ .+..||..+ ..+..+.....+...-..+. -+ +.+++.|+.++ .+.+||.
T Consensus 163 ~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-~I~iwd~ 236 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-TCIIWTQ 236 (753)
T ss_dssp ----CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-CEEEEEE
T ss_pred ccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-EEEEecC
Confidence 356666665543 355666543 33433322111111111222 24 78888888776 8999998
Q ss_pred CCCc--eE-EccCCCCCcCCCCceEE-EeCCEEEEEcCCce-EEEEEcCC
Q 045821 278 ESRE--WS-PVGRLSTLLTRPPCKLV-AIGKTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 278 ~~~~--W~-~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~-~~~~d~~~ 322 (352)
.+.+ +. .+..... ......++. ..+++.++.|+.+. +.+||+..
T Consensus 237 ~~~~~~~~~~~~~~~~-~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEK-FPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSSCCBCCBSSSSC-CSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCCcceeEEeccCC-CCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 8753 11 1111111 111112222 23566666666554 55788773
No 81
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.09 E-value=0.048 Score=48.05 Aligned_cols=145 Identities=7% Similarity=0.031 Sum_probs=74.4
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE----CCEEEEEccCCCCCCceEEEEEeCCCCceeec
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM----DGKIYIRCSASAATSHVCALVYEPSTDSWLHA 242 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~----~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~ 242 (352)
++..++.++.+ ..+.+||..+.+-...- ........++.+ ++.+++.|+.++ .+..||..+.+....
T Consensus 165 ~~~~l~t~s~D--~~v~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 165 SDMQILTASGD--GTCALWDVESGQLLQSF--HGHGADVLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRSGQCVQA 235 (354)
T ss_dssp SSSEEEEEETT--SEEEEEETTTCCEEEEE--ECCSSCEEEEEECCCSSCCEEEEEETTS-----CEEEEETTTCCEEEE
T ss_pred CCCEEEEEeCC--CcEEEEeCCCCeEEEEE--cCCCCCeEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCCCcEEEE
Confidence 34444555544 67889999887643221 111111111212 456777766553 478888887765432
Q ss_pred CCCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceE-EEeCCEEEEEcCCc-eEEEE
Q 045821 243 DANMASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKL-VAIGKTIFVIGKGC-SAVVI 318 (352)
Q Consensus 243 ~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~~i~v~gG~~-~~~~~ 318 (352)
-.... ..-..+. .++.+++.|+.++ .+.+||..++.-..+-..... .....++ ...++++++.|+.+ .+.+|
T Consensus 236 ~~~h~--~~v~~v~~~p~~~~l~s~s~D~-~v~lwd~~~~~~~~~~~~~~~-~~~~~~~~~s~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 236 FETHE--SDVNSVRYYPSGDAFASGSDDA-TCRLYDLRADREVAIYSKESI-IFGASSVDFSLSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp ECCCS--SCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECCTTC-CSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ecCCC--CCeEEEEEeCCCCEEEEEeCCC-eEEEEECCCCcEEEEEcCCCc-ccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence 11111 1111222 2567777777766 899999987643322111110 0111122 22356666666655 46689
Q ss_pred EcCCcc
Q 045821 319 DVGNIG 324 (352)
Q Consensus 319 d~~~~~ 324 (352)
|+.+..
T Consensus 312 d~~~~~ 317 (354)
T 2pbi_B 312 DVLKGS 317 (354)
T ss_dssp ETTTCS
T ss_pred ECCCCc
Confidence 986543
No 82
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.09 E-value=0.013 Score=51.27 Aligned_cols=227 Identities=11% Similarity=0.027 Sum_probs=110.4
Q ss_pred CceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCccee
Q 045821 81 ERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCY 160 (352)
Q Consensus 81 ~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~ 160 (352)
.....+.+|+ .++.+..+..... ..........-++++|+.+.. .....+++||..+++++.+.........
T Consensus 16 ~~i~v~~~d~--~tg~~~~~~~~~~--~~~p~~~a~spdg~l~~~~~~----~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 87 (347)
T 3hfq_A 16 QGIYQGTLDT--TAKTLTNDGLLAA--TQNPTYLALSAKDCLYSVDKE----DDEGGIAAWQIDGQTAHKLNTVVAPGTP 87 (347)
T ss_dssp CEEEEEEEET--TTTEEEEEEEEEE--CSCCCCEEECTTCEEEEEEEE----TTEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred CCEEEEEEcC--CCCeEEEeeeeec--cCCcceEEEccCCeEEEEEec----CCCceEEEEEecCCcEEEeeeeecCCCC
Confidence 3456778888 8888776543221 111122223336777776532 1236789999988887666542211111
Q ss_pred -eeeEEE-CC-EEEEEeCCCCCCceEEEeCC-CCcEEEecCCCC---c------ccceeEEE--ECCEEEEEccCCCCCC
Q 045821 161 -FPCGVL-NQ-KIYCIGGLGDTHSWDVYDPR-TNNWKLHTEPNI---F------TEIEDSFV--MDGKIYIRCSASAATS 225 (352)
Q Consensus 161 -~~~~~~-~~-~iyv~gG~~~~~~v~~yd~~-t~~W~~~~~~~~---~------~~~~~~~~--~~g~iyv~GG~~~~~~ 225 (352)
..++.- ++ .+|+.+..+ ..+.+||.. +...+.+..... . ......+. -+|++|+.+...
T Consensus 88 p~~~a~spdg~~l~~~~~~~--~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~---- 161 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK--GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS---- 161 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT--TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT----
T ss_pred CEEEEECCCCCEEEEEeCCC--CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC----
Confidence 122222 44 577765322 567788875 334433321110 0 00112222 267777764322
Q ss_pred ceEEEEEeCC-CCceeecCC---CCCCCCCCcEEEECCE-EEEEecCCCCeEEEEeCC--CCceEEccC---CCCCcCC-
Q 045821 226 HVCALVYEPS-TDSWLHADA---NMASGWRGPAVVVDDA-LYVLDQSSGTKLMMWQKE--SREWSPVGR---LSTLLTR- 294 (352)
Q Consensus 226 ~~~i~~yd~~-~~~W~~~~~---~~~~~~~~~~~~~~~~-l~~~gg~~~~~v~~yd~~--~~~W~~~~~---~~~~~~~- 294 (352)
..+..||.. +++...+.. .....-...++.-+++ +|+.+...+ .+.+||.. ++++..+.. .+.....
T Consensus 162 -~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~-~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 162 -DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS-QIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp -TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT-EEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred -CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC-EEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 257778876 555544321 1110101112333565 666654443 66666655 566654432 2321111
Q ss_pred C-CceEE-EeCC-EEEEEcC-CceEEEEEcCCc
Q 045821 295 P-PCKLV-AIGK-TIFVIGK-GCSAVVIDVGNI 323 (352)
Q Consensus 295 ~-~~~~~-~~~~-~i~v~gG-~~~~~~~d~~~~ 323 (352)
. ...++ ..++ .||+.+. ...+.+||+...
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 1 11122 2244 5777653 456778998743
No 83
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.07 E-value=0.079 Score=48.00 Aligned_cols=188 Identities=13% Similarity=0.115 Sum_probs=99.3
Q ss_pred EEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEE
Q 045821 115 FEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKL 194 (352)
Q Consensus 115 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~ 194 (352)
....++..++.|+.+ ..+.+||..+.+-...-.... ..-.+..+++.+++.|+.+ ..+.+||..+.+-..
T Consensus 138 ~~~~d~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h~--~~v~~l~~~~~~l~sg~~d--g~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD------NTIKIWDKNTLECKRILTGHT--GSVLCLQYDERVIITGSSD--STVRVWDVNTGEMLN 207 (435)
T ss_dssp EEECCSSEEEEEESS------SCEEEEESSSCCEEEEECCCS--SCEEEEECCSSEEEEEETT--SCEEEEESSSCCEEE
T ss_pred EEEECCCEEEEEeCC------CeEEEEeCCCCeEEEEEcCCC--CcEEEEEECCCEEEEEcCC--CeEEEEECCCCcEEE
Confidence 344467777777643 458889988765332211111 1112233377777777765 688999998876433
Q ss_pred ecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEEECCEEEEEecCCCCeEE
Q 045821 195 HTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVVVDDALYVLDQSSGTKLM 273 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~ 273 (352)
.- ........++.+++..++.|+.++ .+..||..+..-... ............+..+++.++.|+.++ .+.
T Consensus 208 ~~--~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-~i~ 279 (435)
T 1p22_A 208 TL--IHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR-TIK 279 (435)
T ss_dssp EE--CCCCSCEEEEECCTTEEEEEETTS-----CEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS-EEE
T ss_pred EE--cCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCC-eEE
Confidence 21 111222233444555666665543 477888766542211 000111111123444667777777666 899
Q ss_pred EEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 274 MWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 274 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
+||..+.+-... +.. ......++. .++..++.|+.+ .+.+||+.+..
T Consensus 280 vwd~~~~~~~~~--~~~-~~~~v~~~~-~~~~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 280 VWNTSTCEFVRT--LNG-HKRGIACLQ-YRDRLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp EEETTTCCEEEE--EEC-CSSCEEEEE-EETTEEEEEETTSCEEEEETTTCC
T ss_pred EEECCcCcEEEE--EcC-CCCcEEEEE-eCCCEEEEEeCCCeEEEEECCCCC
Confidence 999987654322 111 011112333 345555555544 56689987643
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.07 E-value=0.069 Score=47.58 Aligned_cols=188 Identities=9% Similarity=0.007 Sum_probs=89.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcc--------------eeeeeEEECCEEEEEeCCCCCCceEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTAR--------------CYFPCGVLNQKIYCIGGLGDTHSWDV 184 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r--------------~~~~~~~~~~~iyv~gG~~~~~~v~~ 184 (352)
++..++.++. ...+.+||..+++....-...... ....++...+..+++++.+ ..+.+
T Consensus 160 ~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~i~~ 231 (425)
T 1r5m_A 160 DGTHIISMDV------ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK--GAIFV 231 (425)
T ss_dssp TSSEEEEEET------TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG--GCEEE
T ss_pred CCCEEEEEec------CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC--CeEEE
Confidence 4445555543 245788898877643322221111 0222222333335556544 67899
Q ss_pred EeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEE
Q 045821 185 YDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVL 264 (352)
Q Consensus 185 yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 264 (352)
||..+..-...-..........+..-++++++.|+.++ .+..||..+.+-...-..............++ +++.
T Consensus 232 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 232 YQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp EETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEE
T ss_pred EEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEecCCCccEEEEEECCCC-EEEE
Confidence 99987642211111111111122223666666665442 47788876654322211111111111122355 6666
Q ss_pred ecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 265 DQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 265 gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
++.++ .+.+||..+.+-...-.... ....++. ..++++++.|+.+ .+.+||+....
T Consensus 306 ~~~d~-~i~i~d~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 306 CSMDG-SVRLWSLKQNTLLALSIVDG---VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EETTS-EEEEEETTTTEEEEEEECTT---CCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EeCCC-cEEEEECCCCcEeEecccCC---ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 66655 89999998765433221111 1111222 2245566666544 56789987654
No 85
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.04 E-value=0.04 Score=49.70 Aligned_cols=187 Identities=10% Similarity=-0.018 Sum_probs=87.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+++.|+.++ .+.+||..+.+-.. .+......-..+.+ ++..++.|+.+ ..+.+||..+......-
T Consensus 161 ~~~~l~sgs~D~------~i~iwd~~~~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D--~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 161 SGKLLASCSADM------TIKLWDFQGFECIR--TMHGHDHNVSSVSIMPNGDHIVSASRD--KTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp TSSEEEEEETTS------CCCEEETTSSCEEE--CCCCCSSCEEEEEECSSSSEEEEEETT--SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCC--CeEEEEECCCCcEEEEE
Confidence 456666776543 46677887654322 12111111112222 45666667655 68899999887643221
Q ss_pred CCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCC-----------------Cc---EEE
Q 045821 197 EPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWR-----------------GP---AVV 256 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~-----------------~~---~~~ 256 (352)
.............-++.+++.|+.++ .+..||..+......-........ .. ...
T Consensus 231 ~~h~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 231 TGHREWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred eCCCccEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 11111111111222567777766553 466777766544321100000000 00 001
Q ss_pred ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCce-EEEEEcCCcc
Q 045821 257 VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGCS-AVVIDVGNIG 324 (352)
Q Consensus 257 ~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~-~~~~d~~~~~ 324 (352)
..+.+++.|+.++ .+.+||..++.-... +.. ......++. ..+++.++.|+.+. +.++|.....
T Consensus 306 ~~g~~l~sgs~D~-~i~iwd~~~~~~~~~--~~~-h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 306 KPGPFLLSGSRDK-TIKMWDVSTGMCLMT--LVG-HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp --CCEEEEEETTS-EEEEEETTTTEEEEE--EEC-CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CCCCEEEEEeCCC-eEEEEECCCCceEEE--EEC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 1255667777665 899999987653211 111 001111222 23455555565554 6688886544
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.03 E-value=0.18 Score=45.79 Aligned_cols=177 Identities=11% Similarity=0.055 Sum_probs=92.9
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
.++..++.|+.+ ..+.+||..+.+-...-.............-++..++.|+.+ ..+.+||..+.+-...
T Consensus 278 ~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d--g~i~vwd~~~~~~~~~-- 347 (464)
T 3v7d_B 278 GHGNIVVSGSYD------NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD--TTIRIWDLENGELMYT-- 347 (464)
T ss_dssp EETTEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT--SCEEEEETTTTEEEEE--
T ss_pred CCCCEEEEEeCC------CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC--CcEEEEECCCCcEEEE--
Confidence 344455555532 458889988776332211111111111122255566666655 6799999988753322
Q ss_pred CCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeC
Q 045821 198 PNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 198 ~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~ 277 (352)
+........++.+++..++.|+.++ .+..||..+..-..... .........+..++.+++.|+ ++ .+.+||.
T Consensus 348 ~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg-~i~iwd~ 419 (464)
T 3v7d_B 348 LQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-EN-QFNIYNL 419 (464)
T ss_dssp ECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TT-EEEEEET
T ss_pred EeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CC-eEEEEEC
Confidence 2222222234455677677766553 58888887654322111 111112223456777777777 44 8999999
Q ss_pred CCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCce
Q 045821 278 ESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCS 314 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~ 314 (352)
.+++-......+. .....++...++.+++.++.+.
T Consensus 420 ~~g~~~~~~~~~~--~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 420 RSGKLVHANILKD--ADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp TTCCEEESCTTTT--CSEEEEEEEETTEEEEEEEETT
T ss_pred CCCcEEehhhccC--CCcEEEEEecCCEEEEEEEeCC
Confidence 9887654322222 1222334444666666665443
No 87
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.02 E-value=0.079 Score=44.40 Aligned_cols=186 Identities=11% Similarity=0.067 Sum_probs=93.8
Q ss_pred ceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCC-CeeEecCCCCCccee
Q 045821 82 RVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASM-NTWTDAAPMSTARCY 160 (352)
Q Consensus 82 ~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t-~~W~~~~~~~~~r~~ 160 (352)
...++++|. .++....+..... .........++..+++++ ...++++|..+ ++...+.........
T Consensus 21 ~~~i~~~d~--~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 21 RSSIEIFNI--RTRKMRVVWQTPE----LFEAPNWSPDGKYLLLNS-------EGLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp CEEEEEEET--TTTEEEEEEEESS----CCEEEEECTTSSEEEEEE-------TTEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred ceeEEEEeC--CCCceeeeccCCc----ceEeeEECCCCCEEEEEc-------CCeEEEEeCCCCCCceEeccccccccc
Confidence 345677788 7776665544321 111112222455555543 24789999998 776655433321111
Q ss_pred eeeEEE-CCEEEEEeCCCC--CCceEEEeCCCCcEEEecCCCCcccceeEEEECCE-EEEEccCCCCCCceEEEEEeCCC
Q 045821 161 FPCGVL-NQKIYCIGGLGD--THSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGK-IYIRCSASAATSHVCALVYEPST 236 (352)
Q Consensus 161 ~~~~~~-~~~iyv~gG~~~--~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~-iyv~GG~~~~~~~~~i~~yd~~~ 236 (352)
..++.. +++.+++++... ...++.+|..+..-+.+..... .......-+++ |++.++.. ....++.+|..+
T Consensus 88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~~~~---~~~~l~~~~~~~ 162 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP--SYWHGWSPDGKSFTYCGIRD---QVFDIYSMDIDS 162 (297)
T ss_dssp SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS--EEEEEECTTSSEEEEEEEET---TEEEEEEEETTT
T ss_pred cceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC--ccceEECCCCCEEEEEECCC---CceEEEEEECCC
Confidence 222222 555445544222 2778888888777555543221 11111222454 55443332 224678888877
Q ss_pred CceeecCCCCCCCCCCcEEEECCE-EEEEecCCC-CeEEEEeCCCCceEEcc
Q 045821 237 DSWLHADANMASGWRGPAVVVDDA-LYVLDQSSG-TKLMMWQKESREWSPVG 286 (352)
Q Consensus 237 ~~W~~~~~~~~~~~~~~~~~~~~~-l~~~gg~~~-~~v~~yd~~~~~W~~~~ 286 (352)
.....+..... .........+++ |++.+...+ ..++.++..++....+.
T Consensus 163 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 163 GVETRLTHGEG-RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp CCEEECCCSSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred CcceEcccCCC-ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 77766543211 111111223554 444443233 57888887777766664
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.01 E-value=0.11 Score=44.68 Aligned_cols=188 Identities=11% Similarity=0.009 Sum_probs=86.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEP 198 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~ 198 (352)
++..++.|+.+ ..+..++.......................-++..++.|+.+ ..+.+||.....-......
T Consensus 97 dg~~l~s~~~d------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d--~~~~~~d~~~~~~~~~~~~ 168 (340)
T 4aow_A 97 DGQFALSGSWD------GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD--KTIKLWNTLGVCKYTVQDE 168 (340)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT--SCEEEECTTSCEEEEECSS
T ss_pred CCCEEEEEccc------ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC--CeEEEEEeCCCceEEEEec
Confidence 45566666543 346777777765443322222111111122244555556544 5677888765543222211
Q ss_pred CCcccceeEEE-E--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEE
Q 045821 199 NIFTEIEDSFV-M--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMW 275 (352)
Q Consensus 199 ~~~~~~~~~~~-~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~y 275 (352)
........... . .+.+++.|+.+. .+..||..+.+-...-..........++..++++++.|+.++ .+.+|
T Consensus 169 ~~~~~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg-~i~iw 242 (340)
T 4aow_A 169 SHSEWVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG-QAMLW 242 (340)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC-EEEEE
T ss_pred cccCcccceEEccCCCCcEEEEEcCCC-----EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC-eEEEE
Confidence 11111111111 1 234555555442 477788877654432111111101111223677788887766 89999
Q ss_pred eCCCCceEEccCCCCCcCCCCceEEEe-CCEEEEEcCCceEEEEEcCCcc
Q 045821 276 QKESREWSPVGRLSTLLTRPPCKLVAI-GKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 276 d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
|..+..-...-.... ...++... ++.++..+....+.+||.+...
T Consensus 243 d~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 243 DLNEGKHLYTLDGGD----IINALCFSPNRYWLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp ETTTTEEEEEEECSS----CEEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred EeccCceeeeecCCc----eEEeeecCCCCceeeccCCCEEEEEECCCCe
Confidence 988754322211111 11122222 3344443333356678876543
No 89
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.00 E-value=0.15 Score=44.37 Aligned_cols=230 Identities=10% Similarity=0.097 Sum_probs=118.2
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECC-CC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDAS-MN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~-t~ 146 (352)
.+.+|++|.. + .++.-+- ...+|+.+...... .......+....+.+|+.|.. ..+++ ... -.
T Consensus 46 ~~~~~~~G~~---g--~i~~s~D--gG~tW~~~~~~~~~-~~~~~~~i~~~~~~~~~~g~~-------g~i~~-S~DgG~ 109 (327)
T 2xbg_A 46 RHHGWLVGVN---A--TLMETRD--GGQTWEPRTLVLDH-SDYRFNSVSFQGNEGWIVGEP-------PIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEETT---T--EEEEESS--TTSSCEECCCCCSC-CCCEEEEEEEETTEEEEEEET-------TEEEE-ESSTTS
T ss_pred CCcEEEEcCC---C--eEEEeCC--CCCCCeECCCCCCC-CCccEEEEEecCCeEEEEECC-------CeEEE-ECCCCC
Confidence 5667776431 1 1333333 46799988642110 112234445556788887521 23443 333 45
Q ss_pred eeEecCCCC-CcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCCC
Q 045821 147 TWTDAAPMS-TARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASAA 223 (352)
Q Consensus 147 ~W~~~~~~~-~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~~ 223 (352)
+|+.+.... .+.....++. -++.+|+.+.. ..+++-+-.-.+|+.+...... ....++.. ++.+|++| ..+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---g~v~~S~DgG~tW~~~~~~~~~-~~~~~~~~~~~~~~~~g-~~G- 183 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMITNV---GAIYRTKDSGKNWQALVQEAIG-VMRNLNRSPSGEYVAVS-SRG- 183 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEETT---CCEEEESSTTSSEEEEECSCCC-CEEEEEECTTSCEEEEE-TTS-
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEeCC---ccEEEEcCCCCCCEEeecCCCc-ceEEEEEcCCCcEEEEE-CCC-
Confidence 799886432 2222233333 36788888752 2344444445689998753322 22223222 56777764 221
Q ss_pred CCceEEEEE-eCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCC-CCceEEccCC--CCCcCCCCceE
Q 045821 224 TSHVCALVY-EPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKE-SREWSPVGRL--STLLTRPPCKL 299 (352)
Q Consensus 224 ~~~~~i~~y-d~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~-~~~W~~~~~~--~~~~~~~~~~~ 299 (352)
.++.- |....+|+.+...........++..++.+|+.+.. + .+++.+.+ ..+|+.+... +. .....++
T Consensus 184 ----~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~-G-~~~~s~~D~G~tW~~~~~~~~~~--~~~~~~v 255 (327)
T 2xbg_A 184 ----SFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNG-G-KIAFSDPDNSENWGELLSPLRRN--SVGFLDL 255 (327)
T ss_dssp ----SEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETT-T-EEEEEETTEEEEECCCBCTTSSC--CSCEEEE
T ss_pred ----cEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCC-c-eEEEecCCCCCeeEeccCCcccC--CcceEEE
Confidence 24444 33367899885433222222222346778877642 3 56666433 6789987532 22 1122333
Q ss_pred EEe-CCEEEEEcCCceEEEEEcCCccccc
Q 045821 300 VAI-GKTIFVIGKGCSAVVIDVGNIGNIG 327 (352)
Q Consensus 300 ~~~-~~~i~v~gG~~~~~~~d~~~~~w~~ 327 (352)
+.. ++.+|+.|+...++.-.-.-.+|..
T Consensus 256 ~~~~~~~~~~~g~~g~i~~S~DgG~tW~~ 284 (327)
T 2xbg_A 256 AYRTPNEVWLAGGAGALLCSQDGGQTWQQ 284 (327)
T ss_dssp EESSSSCEEEEESTTCEEEESSTTSSCEE
T ss_pred EecCCCEEEEEeCCCeEEEeCCCCcccEE
Confidence 322 5789988875445443333457864
No 90
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.97 E-value=0.069 Score=46.26 Aligned_cols=147 Identities=12% Similarity=0.079 Sum_probs=73.0
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CC-EEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GK-NAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.+|+.++. .-.++++|+ .+++....-..+. ......++.. ++ .+|+.+. ....+++||+.+
T Consensus 10 ~~~~~v~~~~----~~~v~~~d~--~~~~~~~~~~~~~---~~~~~~~~~s~dg~~~~v~~~------~~~~i~~~d~~t 74 (349)
T 1jmx_B 10 GHEYMIVTNY----PNNLHVVDV--ASDTVYKSCVMPD---KFGPGTAMMAPDNRTAYVLNN------HYGDIYGIDLDT 74 (349)
T ss_dssp TCEEEEEEET----TTEEEEEET--TTTEEEEEEECSS---CCSSCEEEECTTSSEEEEEET------TTTEEEEEETTT
T ss_pred CCEEEEEeCC----CCeEEEEEC--CCCcEEEEEecCC---CCCCceeEECCCCCEEEEEeC------CCCcEEEEeCCC
Confidence 6778887664 235667798 7776543333331 0011223332 34 5777753 235789999998
Q ss_pred CeeEecCCCCC-----cceeeeeEEE-CC-EEEEEeCC--------C-CCCceEEEeCCCCcE----EEecCCCCcccce
Q 045821 146 NTWTDAAPMST-----ARCYFPCGVL-NQ-KIYCIGGL--------G-DTHSWDVYDPRTNNW----KLHTEPNIFTEIE 205 (352)
Q Consensus 146 ~~W~~~~~~~~-----~r~~~~~~~~-~~-~iyv~gG~--------~-~~~~v~~yd~~t~~W----~~~~~~~~~~~~~ 205 (352)
++-...-..+. ......++.. ++ .+|+.+.. . ....+.+||..+++- .... .+. ....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~-~~~~ 152 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPR-QVYL 152 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCS-SCCC
T ss_pred CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCC-cccc
Confidence 87543211211 1111222332 34 56665521 0 016788999887431 1111 111 1111
Q ss_pred eEEEECCEEEEEccCCCCCCceEEEEEeCCCCce
Q 045821 206 DSFVMDGKIYIRCSASAATSHVCALVYEPSTDSW 239 (352)
Q Consensus 206 ~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W 239 (352)
.+..-+|++|+.+ . .+..+|..+.+-
T Consensus 153 ~~~s~dg~l~~~~-~-------~i~~~d~~~~~~ 178 (349)
T 1jmx_B 153 MRAADDGSLYVAG-P-------DIYKMDVKTGKY 178 (349)
T ss_dssp EEECTTSCEEEES-S-------SEEEECTTTCCE
T ss_pred eeECCCCcEEEcc-C-------cEEEEeCCCCce
Confidence 1223367777742 2 277888776654
No 91
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.96 E-value=0.24 Score=47.93 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=73.2
Q ss_pred EEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCc--------ceeeeeEEECCEEEEEeCCCCCCceEEE
Q 045821 116 EVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTA--------RCYFPCGVLNQKIYCIGGLGDTHSWDVY 185 (352)
Q Consensus 116 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~gG~~~~~~v~~y 185 (352)
++.++.||+... ...++.+|..|++ |+.-...+.. ......++.+++||+.... ..+..+
T Consensus 74 ~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d---g~l~al 143 (677)
T 1kb0_A 74 VVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD---GRLIAL 143 (677)
T ss_dssp EEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT---SEEEEE
T ss_pred EEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC---CEEEEE
Confidence 567999998854 3578999999886 8765443211 1123456678999986532 578999
Q ss_pred eCCCCc--EEEecC-C-CC-cccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc--eeec
Q 045821 186 DPRTNN--WKLHTE-P-NI-FTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHA 242 (352)
Q Consensus 186 d~~t~~--W~~~~~-~-~~-~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~ 242 (352)
|..|++ |+.-.. . .. .......++.++.+|+..+.........+..||..+++ |+.-
T Consensus 144 D~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 144 DAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp ETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 998874 876432 1 11 11122345678898886433221223479999987765 8754
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.95 E-value=0.15 Score=47.93 Aligned_cols=274 Identities=9% Similarity=0.026 Sum_probs=129.3
Q ss_pred CCCcHHHHHHhhccC----ccccchhhhhhhhhhcccccChhhHHHHhhCCC-CCCEEEEEEecCCCCceeEEEecCCCC
Q 045821 19 SGLPDDIALFCLARV----PRRYHAVLKCVSSRWRGLLHSEEWCAYRRKHNL-DETWIYAFCRDNKLERVCCYVLDPNST 93 (352)
Q Consensus 19 ~~lp~dl~~~il~r~----p~~~~~~l~~v~k~W~~l~~s~~~~~~~~~~~~-~~~~l~~~gg~~~~~~~~~~~~d~~~~ 93 (352)
..|.++=+..|.+.+ +......+..+.+.|..+......+. +..+.. .++.+|+.++. .-.+.++|. .
T Consensus 95 ~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-~~~~~~~p~~~~~vs~~~----d~~V~v~D~--~ 167 (543)
T 1nir_A 95 GELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPK-KQLNDLDLPNLFSVTLRD----AGQIALVDG--D 167 (543)
T ss_dssp TSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCS-SCCSCCCGGGEEEEEEGG----GTEEEEEET--T
T ss_pred cCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCc-ccccccCCCCEEEEEEcC----CCeEEEEEC--C
Confidence 467776444444433 22222344556677766542221111 111222 26788877653 224455688 7
Q ss_pred CCCeeEeccCCCcccCCcceEEEEE-C-CEEEEEeCCCCCCCCCCeEEEEEC--CCCeeEecCCCCCcceeeeeEEE---
Q 045821 94 RRSWKMIHELPARTLRRKGMGFEVL-G-KNAYLLGGCGWSEDATSEVYCYDA--SMNTWTDAAPMSTARCYFPCGVL--- 166 (352)
Q Consensus 94 ~~~w~~~~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~d~--~t~~W~~~~~~~~~r~~~~~~~~--- 166 (352)
++.....-... ..-+.++.. + ..+|+.+. ...+.+||+ .+.+- +..++.......++..
T Consensus 168 t~~~~~~i~~g-----~~~~~v~~spdg~~l~v~~~-------d~~V~v~D~~~~t~~~--~~~i~~g~~p~~va~sp~~ 233 (543)
T 1nir_A 168 SKKIVKVIDTG-----YAVHISRMSASGRYLLVIGR-------DARIDMIDLWAKEPTK--VAEIKIGIEARSVESSKFK 233 (543)
T ss_dssp TCCEEEEEECS-----TTEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCEE--EEEEECCSEEEEEEECCST
T ss_pred CceEEEEEecC-----cccceEEECCCCCEEEEECC-------CCeEEEEECcCCCCcE--EEEEecCCCcceEEeCCCc
Confidence 76543222221 112333333 3 45776653 167999999 66543 2222222222222332
Q ss_pred --CC-EEEEEeCCCCCCceEEEeCCCCcEEEe-cCCC--C-------cccceeEEE-E-CCEEEEEccCCCCCCceEEEE
Q 045821 167 --NQ-KIYCIGGLGDTHSWDVYDPRTNNWKLH-TEPN--I-------FTEIEDSFV-M-DGKIYIRCSASAATSHVCALV 231 (352)
Q Consensus 167 --~~-~iyv~gG~~~~~~v~~yd~~t~~W~~~-~~~~--~-------~~~~~~~~~-~-~g~iyv~GG~~~~~~~~~i~~ 231 (352)
++ .+|+....+ ..+.++|..+.+-... +... . ...-.+++. . ++.+|+.... ...++.
T Consensus 234 ~~dg~~l~v~~~~~--~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----~g~i~v 306 (543)
T 1nir_A 234 GYEDRYTIAGAYWP--PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----TGKVLL 306 (543)
T ss_dssp TCTTTEEEEEEEES--SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----TTEEEE
T ss_pred CCCCCEEEEEEccC--CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-----CCeEEE
Confidence 44 566654222 6788999888754332 2111 0 001111222 2 3455555321 236788
Q ss_pred EeCCCCcee---ecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEccCCCC-CcCCCCceEEEe-CCEE
Q 045821 232 YEPSTDSWL---HADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVGRLST-LLTRPPCKLVAI-GKTI 306 (352)
Q Consensus 232 yd~~~~~W~---~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~-~~~~~~~~~~~~-~~~i 306 (352)
+|..+.+-. .++. ...-+..++.-+++.+++++...+.|.++|.++++-...-.... +.......++.. ++.+
T Consensus 307 vd~~~~~~l~~~~i~~--~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~ 384 (543)
T 1nir_A 307 VNYKDIDNLTVTSIGA--APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPV 384 (543)
T ss_dssp EECTTSSSCEEEEEEC--CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEE
T ss_pred EEecCCCcceeEEecc--CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccE
Confidence 887664321 2221 11112223334666444444333489999999887554322111 011122233322 3778
Q ss_pred EEEc--CCceEEEEEcCC
Q 045821 307 FVIG--KGCSAVVIDVGN 322 (352)
Q Consensus 307 ~v~g--G~~~~~~~d~~~ 322 (352)
|+.+ |...+.++|+..
T Consensus 385 ~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 385 WSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEBSSSSEEEEEECCT
T ss_pred EEeccCCCceEEEEEeCC
Confidence 8876 345677899876
No 93
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.95 E-value=0.11 Score=45.59 Aligned_cols=183 Identities=6% Similarity=-0.036 Sum_probs=89.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEEC-CEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLN-QKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~-~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.|+.+ ..+.+||..+++-...-.-...........-+ ..+++.|+.+ ..+.+||..+.+-...-.
T Consensus 138 dg~~l~sgs~d------~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D--~~v~iwd~~~~~~~~~~~ 209 (344)
T 4gqb_B 138 SGTQAVSGSKD------ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED--NRILLWDTRCPKPASQIG 209 (344)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT--SCEEEEETTSSSCEEECC
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc--cccccccccccceeeeee
Confidence 55666666543 45788999887633221111111111111123 3577777765 678999998876433211
Q ss_pred CCCcccce-eEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCcee-ecCCCCCCCCCCcEEEE--CC-EEEEEecCCCC
Q 045821 198 PNIFTEIE-DSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWL-HADANMASGWRGPAVVV--DD-ALYVLDQSSGT 270 (352)
Q Consensus 198 ~~~~~~~~-~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~-~~~~~~~~~~~~~~~~~--~~-~l~~~gg~~~~ 270 (352)
........ .++.. ++++++.|+.++ .+..||..+.+-. .+.. +...-..+.+ ++ ++++.|+.++
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~~~~~~~~~---h~~~v~~v~fsp~g~~~lasgs~D~- 280 (344)
T 4gqb_B 210 CSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKSTSCVLSSAV---HSQCVTGLVFSPHSVPFLASLSEDC- 280 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC--CCEEEEC---CSSCEEEEEECSSSSCCEEEEETTS-
T ss_pred cceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCCcEEEEEcC---CCCCEEEEEEccCCCeEEEEEeCCC-
Confidence 11111111 22222 567778765543 5778888765321 1111 1111112222 34 5666676665
Q ss_pred eEEEEeCCCCceEEccCCCCCcCCCCceEEE--eCCEEEEEcCCce-EEEEEcCC
Q 045821 271 KLMMWQKESREWSPVGRLSTLLTRPPCKLVA--IGKTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~-~~~~d~~~ 322 (352)
.|.+||..+++-.....- ...-.+++. .+..+++-||.+. +.++++..
T Consensus 281 ~i~vwd~~~~~~~~~~~H----~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 281 SLAVLDSSLSELFRSQAH----RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CEEEECTTCCEEEEECCC----SSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred eEEEEECCCCcEEEEcCC----CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 899999988765443211 111122222 2445666666654 44566654
No 94
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.94 E-value=0.073 Score=45.23 Aligned_cols=182 Identities=7% Similarity=-0.016 Sum_probs=96.4
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCC--cEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTN--NWK 193 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~--~W~ 193 (352)
.+++++.|. ....+.++|+.+++ |+.-..-. ...+.+... ++++++.+. ..+..||+ ++ .|+
T Consensus 4 ~~~~lv~~~------~~~~v~~~d~~tG~~~w~~~~~~~--~~~~~~~~~pdG~ilvs~~----~~V~~~d~-~G~~~W~ 70 (276)
T 3no2_A 4 PQHLLVGGS------GWNKIAIINKDTKEIVWEYPLEKG--WECNSVAATKAGEILFSYS----KGAKMITR-DGRELWN 70 (276)
T ss_dssp CCEEEEECT------TCSEEEEEETTTTEEEEEEECCTT--CCCCEEEECTTSCEEEECB----SEEEEECT-TSCEEEE
T ss_pred CCcEEEeeC------CCCEEEEEECCCCeEEEEeCCCcc--CCCcCeEECCCCCEEEeCC----CCEEEECC-CCCEEEE
Confidence 356666653 24678889998886 66433211 122333333 788888433 67999999 44 476
Q ss_pred EecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCC-ceeec-CCC---CCCCCCCcEEEECCEEEEEecCC
Q 045821 194 LHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTD-SWLHA-DAN---MASGWRGPAVVVDDALYVLDQSS 268 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~-~W~~~-~~~---~~~~~~~~~~~~~~~l~~~gg~~ 268 (352)
.-.. ...........-+|++++..... ...++.+|+... .|+.- ... ............++.+++.....
T Consensus 71 ~~~~-~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~ 145 (276)
T 3no2_A 71 IAAP-AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT 145 (276)
T ss_dssp EECC-TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT
T ss_pred EcCC-CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC
Confidence 5431 11111122333477877774331 236778887543 24422 111 00111223344567776665444
Q ss_pred CCeEEEEeCCCCc-eEEccCCCCCcCCCCceEEEeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 269 GTKLMMWQKESRE-WSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 269 ~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
+ .+..||++.+. |+.-... .........++.+++.+... .+..+|+++..
T Consensus 146 ~-~v~~~d~~G~~~w~~~~~~-----~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 146 S-EVREIAPNGQLLNSVKLSG-----TPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp T-EEEEECTTSCEEEEEECSS-----CCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred C-EEEEECCCCCEEEEEECCC-----CccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 4 89999998443 6543321 11123333467777776544 56678987433
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.93 E-value=0.003 Score=56.04 Aligned_cols=149 Identities=13% Similarity=0.131 Sum_probs=73.3
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc-EEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN-WKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~-W~~~ 195 (352)
++.+++.|+. ...+.+||..++.|..+..+......-..+.+ ++..++.|+.+ ..+.+||..+.. |...
T Consensus 22 ~g~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d--~~v~vwd~~~~~~~~~~ 93 (377)
T 3dwl_C 22 QRTEFVTTTA------TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD--RNAYVYEKRPDGTWKQT 93 (377)
T ss_dssp SSSEEECCCS------SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT--SSEEEC------CCCCE
T ss_pred CCCEEEEecC------CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC--CeEEEEEcCCCCceeee
Confidence 4555555543 24577889888888777665532222222222 46666777655 678999998876 5443
Q ss_pred cCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCc-eeecCCCCC-CCCCCcEEE--ECCEEEEEecCCC
Q 045821 196 TEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDS-WLHADANMA-SGWRGPAVV--VDDALYVLDQSSG 269 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~-W~~~~~~~~-~~~~~~~~~--~~~~l~~~gg~~~ 269 (352)
............+.+ ++++++.|+.++ .+..||..+.+ |..+..... +......+. -++++++.|+.++
T Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 94 LVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp EECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred eEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 322222221222222 566666665542 46777776654 332221111 111111222 2667777777766
Q ss_pred CeEEEEeCCCCc
Q 045821 270 TKLMMWQKESRE 281 (352)
Q Consensus 270 ~~v~~yd~~~~~ 281 (352)
.+.+||..+..
T Consensus 169 -~i~iwd~~~~~ 179 (377)
T 3dwl_C 169 -KAYVLSAYVRD 179 (377)
T ss_dssp -CEEEEEECCSS
T ss_pred -EEEEEEEEecc
Confidence 89999986443
No 96
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.93 E-value=0.067 Score=52.83 Aligned_cols=213 Identities=5% Similarity=-0.001 Sum_probs=114.7
Q ss_pred EEEecCCCCCCCeeEeccCCCc----ccCCcceEEEEE-CCE-EEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCC--
Q 045821 85 CYVLDPNSTRRSWKMIHELPAR----TLRRKGMGFEVL-GKN-AYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMST-- 156 (352)
Q Consensus 85 ~~~~d~~~~~~~w~~~~~~~~~----~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~-- 156 (352)
+..||+ .++.+..+...+.. .....-.+++.- ++. |++- .. ...+.+||+.++++..+.....
T Consensus 379 l~~~~~--~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~------~~Gl~~~d~~~~~~~~~~~~~~~l 449 (795)
T 4a2l_A 379 LNLYNP--ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-TH------AGGLSILHRNSGQVENFNQRNSQL 449 (795)
T ss_dssp EEEECT--TTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ET------TTEEEEEETTTCCEEEECTTTSCC
T ss_pred eEEEcC--CCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eC------cCceeEEeCCCCcEEEeecCCCCc
Confidence 456677 77777766532200 011111223332 455 6663 21 2457899999988777653211
Q ss_pred c-ceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCC--Cc--ccceeEEE--ECCEEEEEccCCCCCCceE
Q 045821 157 A-RCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPN--IF--TEIEDSFV--MDGKIYIRCSASAATSHVC 228 (352)
Q Consensus 157 ~-r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~--~~--~~~~~~~~--~~g~iyv~GG~~~~~~~~~ 228 (352)
+ ..-.+.+.. ++.|++... ..+.+||+.+++|+...... .. .....+.. -+|+|++... . .
T Consensus 450 ~~~~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~------G 518 (795)
T 4a2l_A 450 VNENVYAILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E------G 518 (795)
T ss_dssp SCSCEEEEEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S------C
T ss_pred CCCeeEEEEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C------c
Confidence 1 111222222 467777654 45899999999998775321 11 11111222 2678888642 2 3
Q ss_pred EEEEeCCCCceeecCCC-CCCCCC-C--cEEE--ECCEEEEEecCCCCeEEEEeCCCCceEEcc---CCCCCcCCCCceE
Q 045821 229 ALVYEPSTDSWLHADAN-MASGWR-G--PAVV--VDDALYVLDQSSGTKLMMWQKESREWSPVG---RLSTLLTRPPCKL 299 (352)
Q Consensus 229 i~~yd~~~~~W~~~~~~-~~~~~~-~--~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~---~~~~~~~~~~~~~ 299 (352)
+.+||+.++++ ..... ...... . ..+. .+|.|++-.. . .+.+||++++++.... .+|.. ...++
T Consensus 519 l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~--Gl~~~d~~~~~~~~~~~~~gl~~~---~i~~i 591 (795)
T 4a2l_A 519 LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E--GFYCFNEKDKQIKRYNTTNGLPNN---VVYGI 591 (795)
T ss_dssp EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S--CEEEEETTTTEEEEECGGGTCSCS---CEEEE
T ss_pred eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C--CceeECCCCCcEEEeCCCCCCchh---heEEE
Confidence 88899988888 43211 001111 1 1222 2567776443 2 5999999999988764 23331 22333
Q ss_pred EEe-CCEEEEEcCCceEEEEEcCCccc
Q 045821 300 VAI-GKTIFVIGKGCSAVVIDVGNIGN 325 (352)
Q Consensus 300 ~~~-~~~i~v~gG~~~~~~~d~~~~~w 325 (352)
+.- ++.|++-+ ......||+++..+
T Consensus 592 ~~d~~g~lWi~t-~~Gl~~~~~~~~~~ 617 (795)
T 4a2l_A 592 LEDSFGRLWLST-NRGISCFNPETEKF 617 (795)
T ss_dssp EECTTSCEEEEE-TTEEEEEETTTTEE
T ss_pred EECCCCCEEEEc-CCceEEEcCCCCcE
Confidence 332 56777766 45677788876554
No 97
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.92 E-value=0.16 Score=43.21 Aligned_cols=225 Identities=7% Similarity=-0.031 Sum_probs=116.7
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEE-ECCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEV-LGKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.||+++.. .-.++.||+ .++ ...+.... ..-.+++. .++.+|+... ....+.+||+.++
T Consensus 39 g~~l~~~~~~----~~~i~~~~~--~~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~~~------~~~~i~~~d~~~g 100 (296)
T 3e5z_A 39 RSAVIFSDVR----QNRTWAWSD--DGQ-LSPEMHPS-----HHQNGHCLNKQGHLIACSH------GLRRLERQREPGG 100 (296)
T ss_dssp GTEEEEEEGG----GTEEEEEET--TSC-EEEEESSC-----SSEEEEEECTTCCEEEEET------TTTEEEEECSTTC
T ss_pred CCEEEEEeCC----CCEEEEEEC--CCC-eEEEECCC-----CCcceeeECCCCcEEEEec------CCCeEEEEcCCCC
Confidence 3447777543 235778898 776 55554322 11123333 2567877642 1356899999888
Q ss_pred eeEecCCCCCc-c-ee-eeeEEE-CCEEEEE----eCC----------CC-CCceEEEeCCCCcEEEecCCCCcccceeE
Q 045821 147 TWTDAAPMSTA-R-CY-FPCGVL-NQKIYCI----GGL----------GD-THSWDVYDPRTNNWKLHTEPNIFTEIEDS 207 (352)
Q Consensus 147 ~W~~~~~~~~~-r-~~-~~~~~~-~~~iyv~----gG~----------~~-~~~v~~yd~~t~~W~~~~~~~~~~~~~~~ 207 (352)
+...+...... . .. ..++.- +|++|+. |.. .. ...++.||+. ++.+.+..... .....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~--~~~gi 177 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV--KPNGL 177 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS--SEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC--CCccE
Confidence 87665432111 1 11 122222 6788886 321 00 1478899987 55555432111 11122
Q ss_pred E-EECCEEEEEccCCCCCCceEEEEEeCC-CCce-e--ecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCce
Q 045821 208 F-VMDGKIYIRCSASAATSHVCALVYEPS-TDSW-L--HADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREW 282 (352)
Q Consensus 208 ~-~~~g~iyv~GG~~~~~~~~~i~~yd~~-~~~W-~--~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W 282 (352)
+ .-+|++++..... ..+++||.. +++. . .+-......-.+.++.-+|.||+.. +..|.+||++.+..
T Consensus 178 ~~s~dg~~lv~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~---~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 178 AFLPSGNLLVSDTGD-----NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA---GDGVHVLTPDGDEL 249 (296)
T ss_dssp EECTTSCEEEEETTT-----TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE---TTEEEEECTTSCEE
T ss_pred EECCCCCEEEEeCCC-----CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc---CCeEEEECCCCCEE
Confidence 2 2367666543221 368888875 4554 1 1111111111122233477888877 23899999986655
Q ss_pred EEccCCCCCcCCCCceEEE--eC-CEEEEEcCCceEEEEEcCCccccc
Q 045821 283 SPVGRLSTLLTRPPCKLVA--IG-KTIFVIGKGCSAVVIDVGNIGNIG 327 (352)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~--~~-~~i~v~gG~~~~~~~d~~~~~w~~ 327 (352)
..+. .+.. ..+++. .+ +.||+-. ....+-+++++..-++
T Consensus 250 ~~~~-~~~~----~~~~~f~~~d~~~L~v~t-~~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 250 GRVL-TPQT----TSNLCFGGPEGRTLYMTV-STEFWSIETNVRGLEH 291 (296)
T ss_dssp EEEE-CSSC----CCEEEEESTTSCEEEEEE-TTEEEEEECSCCBCCC
T ss_pred EEEE-CCCC----ceeEEEECCCCCEEEEEc-CCeEEEEEcccccccc
Confidence 5543 2221 122222 23 3577665 4567778888776543
No 98
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.049 Score=48.55 Aligned_cols=144 Identities=10% Similarity=0.102 Sum_probs=71.3
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeE-ecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWT-DAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~-~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
+..++.|+. ...+.+||..+.+-. .+..... .. ..++.. ++..++.++.+ ..+.+||..+..-...-.
T Consensus 217 ~~~~~~~~~------~g~i~~~d~~~~~~~~~~~~~~~-~i-~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~ 286 (425)
T 1r5m_A 217 DDKFVIPGP------KGAIFVYQITEKTPTGKLIGHHG-PI-SVLEFNDTNKLLLSASDD--GTLRIWHGGNGNSQNCFY 286 (425)
T ss_dssp TTEEEEECG------GGCEEEEETTCSSCSEEECCCSS-CE-EEEEEETTTTEEEEEETT--SCEEEECSSSBSCSEEEC
T ss_pred CCEEEEEcC------CCeEEEEEcCCCceeeeeccCCC-ce-EEEEECCCCCEEEEEcCC--CEEEEEECCCCccceEec
Confidence 334555553 346888998876422 1111111 11 122222 55566666644 678899988754322111
Q ss_pred CCCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEe
Q 045821 198 PNIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQ 276 (352)
Q Consensus 198 ~~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd 276 (352)
... .....+... ++ +++.|+.++ .+..||..+.+-...-..............++++++.++.++ .+.+||
T Consensus 287 ~~~-~~i~~~~~~~~~-~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~~ 358 (425)
T 1r5m_A 287 GHS-QSIVSASWVGDD-KVISCSMDG-----SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG-QVNVYD 358 (425)
T ss_dssp CCS-SCEEEEEEETTT-EEEEEETTS-----EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS-CEEEEE
T ss_pred CCC-ccEEEEEECCCC-EEEEEeCCC-----cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC-eEEEEE
Confidence 111 111222333 55 555555442 688888876653322111111111111223567777777665 899999
Q ss_pred CCCCc
Q 045821 277 KESRE 281 (352)
Q Consensus 277 ~~~~~ 281 (352)
..+..
T Consensus 359 ~~~~~ 363 (425)
T 1r5m_A 359 LKKLN 363 (425)
T ss_dssp CHHHH
T ss_pred CCCCc
Confidence 87654
No 99
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.89 E-value=0.22 Score=44.42 Aligned_cols=217 Identities=12% Similarity=0.066 Sum_probs=105.0
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeee
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFP 162 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~ 162 (352)
.+.++|. .++......... ....-.+++.. ++..++.|+.+ ..+.+||..+++....-.... ....
T Consensus 114 ~v~lw~~--~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~--~~v~ 180 (401)
T 4aez_A 114 NVYVWNA--DSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQTKLRTMAGHQ--ARVG 180 (401)
T ss_dssp EEEEEET--TTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCCS--SCEE
T ss_pred eEEEeeC--CCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCeEEEEecCCC--CceE
Confidence 3566687 777765554442 11111222222 45566666543 458889988775332211111 1112
Q ss_pred eEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCcee
Q 045821 163 CGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWL 240 (352)
Q Consensus 163 ~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~ 240 (352)
...+++.+++.|+.+ ..+.+||..+..-.... ..........+.+ ++.+++.|+.++ .+..||..+.+-.
T Consensus 181 ~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~ 252 (401)
T 4aez_A 181 CLSWNRHVLSSGSRS--GAIHHHDVRIANHQIGT-LQGHSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPK 252 (401)
T ss_dssp EEEEETTEEEEEETT--SEEEEEETTSSSCEEEE-EECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEE
T ss_pred EEEECCCEEEEEcCC--CCEEEEecccCcceeeE-EcCCCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCcc
Confidence 233356666667655 67889998843311111 1111111112222 677777766543 4788888765433
Q ss_pred ecCCCCCCCCCCcEEEE---CCEEEEEec-CCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE--eCCEEEEEcC-Cc
Q 045821 241 HADANMASGWRGPAVVV---DDALYVLDQ-SSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA--IGKTIFVIGK-GC 313 (352)
Q Consensus 241 ~~~~~~~~~~~~~~~~~---~~~l~~~gg-~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG-~~ 313 (352)
..-..... ....+.. +..+++.|+ .....+.+||..+++-...-.... ...++.. .+..+++.+| .+
T Consensus 253 ~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~g~~d 326 (401)
T 4aez_A 253 FTKTNHNA--AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS----QVTSLIWSPHSKEIMSTHGFPD 326 (401)
T ss_dssp EEECCCSS--CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS----CEEEEEECSSSSEEEEEECTTT
T ss_pred EEecCCcc--eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC----cEEEEEECCCCCeEEEEeecCC
Confidence 21111111 1112222 446777764 233489999998766433221111 1122222 2344554433 33
Q ss_pred -eEEEEEcCCccccc
Q 045821 314 -SAVVIDVGNIGNIG 327 (352)
Q Consensus 314 -~~~~~d~~~~~w~~ 327 (352)
.+.+||........
T Consensus 327 g~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 327 NNLSIWSYSSSGLTK 341 (401)
T ss_dssp CEEEEEEEETTEEEE
T ss_pred CcEEEEecCCcccee
Confidence 45678887755443
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.23 Score=45.08 Aligned_cols=178 Identities=6% Similarity=-0.036 Sum_probs=86.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe--cCCCC--CcceeeeeEEEC---CEEEEEeCCCCCCceEEEeCCCCc
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD--AAPMS--TARCYFPCGVLN---QKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~--~~~~~--~~r~~~~~~~~~---~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
++..++.|+. ...++.++..+.+... +..+. ..........-+ ++.++.|+.+ ..+.+||..+..
T Consensus 160 ~~~~l~~~~~------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--~~i~vwd~~~~~ 231 (450)
T 2vdu_B 160 DDTTVIIADK------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD--EHIKISHYPQCF 231 (450)
T ss_dssp TSSEEEEEET------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT--SCEEEEEESCTT
T ss_pred CCCEEEEEeC------CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC--CcEEEEECCCCc
Confidence 4555555543 3457888877654321 11111 111111122225 7777777765 678899988775
Q ss_pred EEEe-cCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCC-----C-----------------C
Q 045821 192 WKLH-TEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DAN-----M-----------------A 247 (352)
Q Consensus 192 W~~~-~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~-----~-----------------~ 247 (352)
.... ..-......+.+.. ++++++.|+.++ .+..||..+.+.... ... . .
T Consensus 232 ~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (450)
T 2vdu_B 232 IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDD-----KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDI 305 (450)
T ss_dssp CEEEECCCCSSCEEEEEEC-STTEEEEEESSS-----EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------C
T ss_pred eeeeeecCCCCceEEEEEC-CCCEEEEEeCCC-----eEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccccc
Confidence 4322 11111111222333 777777766542 688888877664321 100 0 0
Q ss_pred CCCCCcEEE--ECCEEEEEecCCCCeEEEEeC--C-CCceEEccCCCCCcCCCCceEEEeCCEEEEEcCC
Q 045821 248 SGWRGPAVV--VDDALYVLDQSSGTKLMMWQK--E-SREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKG 312 (352)
Q Consensus 248 ~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~--~-~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~ 312 (352)
.......+. -+++.+++++.....+.+||. . .+.+..+..++.. ....++....+.+++..+.
T Consensus 306 ~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 306 IEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP--YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp BCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS--SCEEEEEEETTEEEEEECC
T ss_pred ceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC--CceEEEEecCCcEEEEEec
Confidence 000111121 245555555423338999998 3 3455555544331 2223444555677766543
No 101
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.87 E-value=0.1 Score=49.34 Aligned_cols=282 Identities=10% Similarity=0.009 Sum_probs=130.5
Q ss_pred CCCcc---CCCcHHHHHHhhc----cCccccchhhhhhhhhhcccccChhhHHHHhhCCCC-CCEEEEEEecCCCCceeE
Q 045821 14 VVPLI---SGLPDDIALFCLA----RVPRRYHAVLKCVSSRWRGLLHSEEWCAYRRKHNLD-ETWIYAFCRDNKLERVCC 85 (352)
Q Consensus 14 ~~~~~---~~lp~dl~~~il~----r~p~~~~~~l~~v~k~W~~l~~s~~~~~~~~~~~~~-~~~l~~~gg~~~~~~~~~ 85 (352)
.+..+ ..|.++=+..|.+ .-+...-.....+.+.|..+......+. +..+... ++.+|+... ..-.+
T Consensus 105 ~Mp~~~~~~~Lsd~ei~~l~~yi~~~~~~~~~~~~~~i~~s~kv~~~~~~~P~-~~~~~~d~~~~~~V~~~----~~~~V 179 (567)
T 1qks_A 105 GMPNWGTSGELSAEQVDLMANYLLLDPAAPPEFGMKEMRESWKVHVAPEDRPT-QQMNDWDLENLFSVTLR----DAGQI 179 (567)
T ss_dssp CCTTTSCCCCCCHHHHHHHHHHHHSCCCCCCCCCHHHHHHHCEESSCGGGSCS-SCCSCCCGGGEEEEEET----TTTEE
T ss_pred CCCCccccCCCCHHHHHHHHHHHhhcccCCCccchhhhhccceeecccccccc-ccccccCCCceEEEEeC----CCCeE
Confidence 34455 3576654444433 2222222334456667776642221111 1111211 567777743 23356
Q ss_pred EEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECC--CCeeEecCCCCCcceee
Q 045821 86 YVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDAS--MNTWTDAAPMSTARCYF 161 (352)
Q Consensus 86 ~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~--t~~W~~~~~~~~~r~~~ 161 (352)
.++|+ .+++-...-+.. ..-+.++.. +..+|+.+. ...+.+||+. +.+ .+..++......
T Consensus 180 ~viD~--~t~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~-------dg~V~viD~~~~t~~--~v~~i~~G~~P~ 243 (567)
T 1qks_A 180 ALIDG--STYEIKTVLDTG-----YAVHISRLSASGRYLFVIGR-------DGKVNMIDLWMKEPT--TVAEIKIGSEAR 243 (567)
T ss_dssp EEEET--TTCCEEEEEECS-----SCEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCC--EEEEEECCSEEE
T ss_pred EEEEC--CCCeEEEEEeCC-----CCccceEECCCCCEEEEEcC-------CCeEEEEECCCCCCc--EeEEEecCCCCc
Confidence 67798 776543222222 111233332 446787642 3579999995 443 222232222222
Q ss_pred eeEEE-----CC-EEEEEeCCCCCCceEEEeCCCCcEEE-ecCCC----------CcccceeEEEECCEEEEEccCCCCC
Q 045821 162 PCGVL-----NQ-KIYCIGGLGDTHSWDVYDPRTNNWKL-HTEPN----------IFTEIEDSFVMDGKIYIRCSASAAT 224 (352)
Q Consensus 162 ~~~~~-----~~-~iyv~gG~~~~~~v~~yd~~t~~W~~-~~~~~----------~~~~~~~~~~~~g~iyv~GG~~~~~ 224 (352)
.++.. ++ .+|+..... ..+.++|..|.+=.. ++... .++.....+..++..+++-- .
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~--~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----~ 317 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWP--PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----K 317 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEET--TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----T
T ss_pred eeEEccccCCCCCEEEEEEccC--CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe----c
Confidence 23333 44 677765433 678889987764322 22111 01111111122333333311 1
Q ss_pred CceEEEEEeCCCCceeecCCCCCCC-CCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEccCC-CC-CcCCCCceEEE
Q 045821 225 SHVCALVYEPSTDSWLHADANMASG-WRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVGRL-ST-LLTRPPCKLVA 301 (352)
Q Consensus 225 ~~~~i~~yd~~~~~W~~~~~~~~~~-~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~-~~-~~~~~~~~~~~ 301 (352)
....++..|..+.....+....... .+...+.-+++.+++.....+.|.++|.++++-...-.. .. +.+..+..++.
T Consensus 318 ~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~ 397 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH 397 (567)
T ss_dssp TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE
T ss_pred CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeEC
Confidence 1225777777665443332211111 112233345665555444445899999998864432222 11 11122333333
Q ss_pred e-CCEEEEEc--CCceEEEEEcCC
Q 045821 302 I-GKTIFVIG--KGCSAVVIDVGN 322 (352)
Q Consensus 302 ~-~~~i~v~g--G~~~~~~~d~~~ 322 (352)
. ++.+|+.+ |...+.++|...
T Consensus 398 p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 398 PTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCcEEEeCCCCCCeEEEecCCC
Confidence 3 36788765 555777888775
No 102
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.85 E-value=0.025 Score=49.97 Aligned_cols=184 Identities=8% Similarity=-0.025 Sum_probs=91.4
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-C-CEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-N-QKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++..++.|+.+ ..+.+||..+++-...-........ +++.. + ..+++.++.+ ..+.+||..+.+-....
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~~~~~~~~h~~~v~-~v~~s~~~~~~~~s~~~d--g~v~~wd~~~~~~~~~~ 220 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKAVLKSYNAHSSEVN-CVAACPGKDTIFLSCGED--GRILLWDTRKPKPATRI 220 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEE-EEEECTTCSSCEEEEETT--SCEEECCTTSSSCBCBC
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEcCCCCCEE-EEEEccCCCceeeeeccC--CceEEEECCCCceeeee
Confidence 45666666543 3578899988764322111111111 12222 3 3466666655 67889999876533221
Q ss_pred CCCCcccceeEEEE---CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--CC-EEEEEecCCCC
Q 045821 197 EPNIFTEIEDSFVM---DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV--DD-ALYVLDQSSGT 270 (352)
Q Consensus 197 ~~~~~~~~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~l~~~gg~~~~ 270 (352)
..........++.+ ++++++.|+.+. .+..||..+.+-...-. .....-..+.+ ++ ++++.|+.++
T Consensus 221 ~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~~~~~~~--~~~~~v~~l~~sp~~~~~lasgs~D~- 292 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPDSAQTSA--VHSQNITGLAYSYHSSPFLASISEDC- 292 (357)
T ss_dssp CCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGGGCEEEC--CCSSCEEEEEECSSSSCCEEEEETTS-
T ss_pred eeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCcEeEEEe--ccceeEEEEEEcCCCCCEEEEEeCCC-
Confidence 11111111222332 356777765442 47788886653211100 01111112222 34 5666676655
Q ss_pred eEEEEeCCCCceEEccCCCCCcCCCCceEEE--eCCEEEEEcCCce-EEEEEcCCc
Q 045821 271 KLMMWQKESREWSPVGRLSTLLTRPPCKLVA--IGKTIFVIGKGCS-AVVIDVGNI 323 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~-~~~~d~~~~ 323 (352)
.|.+||..+++....- .. ...-.+++. .++++++-||.+. +.++|+.+.
T Consensus 293 ~i~iwd~~~~~~~~~~--~H--~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 293 TVAVLDADFSEVFRDL--SH--RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CEEEECTTSCEEEEEC--CC--SSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEEECCCCcEeEEC--CC--CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 8999999887654332 11 111123332 3566666666654 557887654
No 103
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.84 E-value=0.013 Score=51.61 Aligned_cols=187 Identities=9% Similarity=0.088 Sum_probs=94.4
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcce-eeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARC-YFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~-~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
++.+++.||.+ ..+.+||..+++|.....+..... .-..+.+ ++..++.|+.+ ..+.+||..++.++.+
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D--~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD--ATTCIWKKNQDDFECV 98 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT--SCEEEEEECCC-EEEE
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC--CcEEEEEccCCCeEEE
Confidence 45566666643 357788888887653322211111 1112222 56667777765 6778888887776544
Q ss_pred cCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCC-ceeecCCCCCCCCCCcEE--EECCEEEEEecCCCC
Q 045821 196 TEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTD-SWLHADANMASGWRGPAV--VVDDALYVLDQSSGT 270 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~--~~~~~l~~~gg~~~~ 270 (352)
..+.........+.+ ++++++.|+.++ .+..||..+. .+..+.....+......+ .-++++++.|+.++
T Consensus 99 ~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~- 172 (345)
T 3fm0_A 99 TTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD- 172 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS-
T ss_pred EEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC-
Confidence 332221111122222 677777766553 3666776543 232221111111111112 23567777777766
Q ss_pred eEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCce-EEEEEc
Q 045821 271 KLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGCS-AVVIDV 320 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~-~~~~d~ 320 (352)
.+.+||..++.|..+..+... ...-.++. ..+++.++.|+.+. +.++|.
T Consensus 173 ~i~~w~~~~~~~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 173 TVKLYREEEDDWVCCATLEGH-ESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CEEEEEEETTEEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cEEEEEecCCCEEEEEEecCC-CCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 899999998888755433321 11111222 22455556665553 446664
No 104
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.83 E-value=0.18 Score=43.74 Aligned_cols=190 Identities=9% Similarity=0.040 Sum_probs=92.5
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
+.+++.|+.+ ..+.+||..+++-.. +.....+ . .++... ++.+++.|+.+ ..+.+||..+.+-...-
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~-i-~~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYVGHGNA-I-NELKFHPRDPNLLLSVSKD--HALRLWNIQTDTLVAIF 154 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEESCCSC-E-EEEEECSSCTTEEEEEETT--SCEEEEETTTTEEEEEE
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeecCCCCc-E-EEEEECCCCCCEEEEEeCC--CeEEEEEeecCeEEEEe
Confidence 4667777643 468888988765322 2111111 1 112221 55677777765 67899999887643332
Q ss_pred -CCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CC-------------------------CCC
Q 045821 197 -EPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DA-------------------------NMA 247 (352)
Q Consensus 197 -~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~-------------------------~~~ 247 (352)
...........+. -++..++.|+.++ .+..||..+.+-... .. ...
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred cccccccCceeEEEECCCCCEEEEecCCC-----CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 1111111112222 2566666665543 477888766432110 00 000
Q ss_pred CCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCce------------EEccCCCCCcCCCCceEEEeC--CEEEEEcCCc
Q 045821 248 SGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREW------------SPVGRLSTLLTRPPCKLVAIG--KTIFVIGKGC 313 (352)
Q Consensus 248 ~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W------------~~~~~~~~~~~~~~~~~~~~~--~~i~v~gG~~ 313 (352)
....-..+...+.+++.++.++ .+.+||..+..= ..+..+..............+ +++++.|+.+
T Consensus 230 ~~~~v~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d 308 (366)
T 3k26_A 230 HRNYVDCVRWLGDLILSKSCEN-AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 308 (366)
T ss_dssp CSSCCCEEEEETTEEEEECSSS-EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred CcceEEEEEEcCCEEEEEecCC-EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence 1111112333366667776665 899999876431 111111110001111112234 6666666655
Q ss_pred -eEEEEEcCCccc
Q 045821 314 -SAVVIDVGNIGN 325 (352)
Q Consensus 314 -~~~~~d~~~~~w 325 (352)
.+.+||+.....
T Consensus 309 g~i~vwd~~~~~~ 321 (366)
T 3k26_A 309 GKLYVWDLEVEDP 321 (366)
T ss_dssp SCEEEEECCSSSG
T ss_pred CcEEEEECCCCCC
Confidence 466899987653
No 105
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.82 E-value=0.19 Score=42.66 Aligned_cols=212 Identities=8% Similarity=-0.067 Sum_probs=105.5
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCC--eeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRS--WKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~--w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
.+.+++.+.. .-.++.+|+ ++++ |+.-..-. ..........++.+++.+ ...+..||+ +
T Consensus 4 ~~~~lv~~~~----~~~v~~~d~--~tG~~~w~~~~~~~----~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~ 64 (276)
T 3no2_A 4 PQHLLVGGSG----WNKIAIINK--DTKEIVWEYPLEKG----WECNSVAATKAGEILFSY--------SKGAKMITR-D 64 (276)
T ss_dssp CCEEEEECTT----CSEEEEEET--TTTEEEEEEECCTT----CCCCEEEECTTSCEEEEC--------BSEEEEECT-T
T ss_pred CCcEEEeeCC----CCEEEEEEC--CCCeEEEEeCCCcc----CCCcCeEECCCCCEEEeC--------CCCEEEECC-C
Confidence 3456666432 234556687 5554 54332210 112223333477777732 246889999 5
Q ss_pred Ce--eEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCC-cEEEecCC--CCcc--cceeEEEECCEEEEE
Q 045821 146 NT--WTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTN-NWKLHTEP--NIFT--EIEDSFVMDGKIYIR 217 (352)
Q Consensus 146 ~~--W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~-~W~~~~~~--~~~~--~~~~~~~~~g~iyv~ 217 (352)
++ |+.-.. .....+++... ++++++..... ...+..+|+..+ .|+.-... .... ........+|.+++.
T Consensus 65 G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~-~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 65 GRELWNIAAP--AGCEMQTARILPDGNALVAWCGH-PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp SCEEEEEECC--TTCEEEEEEECTTSCEEEEEEST-TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred CCEEEEEcCC--CCccccccEECCCCCEEEEecCC-CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 54 664432 11122333333 67776665431 157788888544 24432111 1111 111233446777766
Q ss_pred ccCCCCCCceEEEEEeCCCC-ceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCc--eEEcc-CCCCCcC
Q 045821 218 CSASAATSHVCALVYEPSTD-SWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESRE--WSPVG-RLSTLLT 293 (352)
Q Consensus 218 GG~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~--W~~~~-~~~~~~~ 293 (352)
.... ..+.+||+..+ .|+.-... .-+......++.+++.+...+ .+..+|+++++ |+.-. .++....
T Consensus 142 ~~~~-----~~v~~~d~~G~~~w~~~~~~---~~~~~~~~~~g~~~v~~~~~~-~v~~~d~~tG~~~w~~~~~~~~~~~l 212 (276)
T 3no2_A 142 LFAT-----SEVREIAPNGQLLNSVKLSG---TPFSSAFLDNGDCLVACGDAH-CFVQLNLESNRIVRRVNANDIEGVQL 212 (276)
T ss_dssp ETTT-----TEEEEECTTSCEEEEEECSS---CCCEEEECTTSCEEEECBTTS-EEEEECTTTCCEEEEEEGGGSBSCCC
T ss_pred ecCC-----CEEEEECCCCCEEEEEECCC---CccceeEcCCCCEEEEeCCCC-eEEEEeCcCCcEEEEecCCCCCCccc
Confidence 4322 26889998732 46654321 111223344677887766544 79999999554 65432 2222111
Q ss_pred CCCceEE-EeCCEEEEEc
Q 045821 294 RPPCKLV-AIGKTIFVIG 310 (352)
Q Consensus 294 ~~~~~~~-~~~~~i~v~g 310 (352)
....++. ..++.+|+..
T Consensus 213 ~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 213 FFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp SEEEEEEECTTSCEEEEE
T ss_pred cccccceEcCCCCEEEEe
Confidence 1112222 3477888876
No 106
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.81 E-value=0.023 Score=49.71 Aligned_cols=181 Identities=12% Similarity=0.035 Sum_probs=87.4
Q ss_pred CeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccc-eeEE-EECC
Q 045821 136 SEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEI-EDSF-VMDG 212 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~-~~~~-~~~g 212 (352)
-.++.+|..++++..+...........++.- ++++|+.+.......+.+||..+++++.+......... ...+ .-+|
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg 97 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR 97 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC
Confidence 4567778888887665332211111122222 67888776532226789999988887766532111111 1222 3355
Q ss_pred -EEEEEccCCCCCCceEEEEEeCC-CCceeecCC------CCCCC---CCC--cEEEECCEEEEEecCCCCeEEEEeCC-
Q 045821 213 -KIYIRCSASAATSHVCALVYEPS-TDSWLHADA------NMASG---WRG--PAVVVDDALYVLDQSSGTKLMMWQKE- 278 (352)
Q Consensus 213 -~iyv~GG~~~~~~~~~i~~yd~~-~~~W~~~~~------~~~~~---~~~--~~~~~~~~l~~~gg~~~~~v~~yd~~- 278 (352)
.||+.+... ..+..||.. +.+...+.. .+..+ ... .++.-++++|+.+... ..+.+||..
T Consensus 98 ~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-~~v~~~~~~~ 171 (347)
T 3hfq_A 98 QLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-DKVYVYNVSD 171 (347)
T ss_dssp TEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-TEEEEEEECT
T ss_pred CEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-CEEEEEEECC
Confidence 466663221 246666663 333333211 01000 011 1223367766655433 489999988
Q ss_pred CCceEEccCCCCCcCCCCceE-EEeCC-EEEEEcC-CceEEEEEcCC
Q 045821 279 SREWSPVGRLSTLLTRPPCKL-VAIGK-TIFVIGK-GCSAVVIDVGN 322 (352)
Q Consensus 279 ~~~W~~~~~~~~~~~~~~~~~-~~~~~-~i~v~gG-~~~~~~~d~~~ 322 (352)
+++...+.............+ ...++ .+|+.+. ...+.+||...
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 566655432211000011112 22344 4887653 34566777664
No 107
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.79 E-value=0.22 Score=48.87 Aligned_cols=141 Identities=9% Similarity=0.095 Sum_probs=78.6
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCc-ccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIF-TEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHAD 243 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~-~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~ 243 (352)
++.|++.+|.. ..+.+||+.+++++.+...... .....+... +|.|++. ... .+.+||+.+++++...
T Consensus 482 ~g~lWi~~~t~--~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~------Gl~~~~~~~~~~~~~~ 552 (758)
T 3ott_A 482 EGNVWVLLYNN--KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG------GVMRINPKDESQQSIS 552 (758)
T ss_dssp TSCEEEEETTC--SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT------EEEEECC--CCCCBCC
T ss_pred CCCEEEEccCC--CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC------ceEEEecCCCceEEec
Confidence 47888865543 5689999999998877421111 111122222 6788875 222 4889999988887653
Q ss_pred C-CCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEe-CCEEEEEcCCceEEEEEcC
Q 045821 244 A-NMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI-GKTIFVIGKGCSAVVIDVG 321 (352)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~d~~ 321 (352)
. ..+.......+..+|.|++... . .+.+||+++.+..... ++.... ..++... ++. +.|||......|+|+
T Consensus 553 ~~gl~~~~i~~i~~~~g~lWi~t~-~--Gl~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~G~-l~fG~~~Gl~~f~p~ 625 (758)
T 3ott_A 553 FGSFSNNEILSMTCVKNSIWVSTT-N--GLWIIDRKTMDARQQN-MTNKRF--TSLLFDPKEDC-VYLGGADGFGISHSN 625 (758)
T ss_dssp CCC---CCEEEEEEETTEEEEEES-S--CEEEEETTTCCEEEC---CCCCC--SEEEEETTTTE-EEEECBSEEEEEEC-
T ss_pred ccCCCccceEEEEECCCCEEEECC-C--CeEEEcCCCceeEEec-CCCCce--eeeEEECCCCc-EEEecCCceEEEChh
Confidence 2 1111111112334778877653 2 6999999998887653 332111 1222222 455 456778888889987
Q ss_pred Cc
Q 045821 322 NI 323 (352)
Q Consensus 322 ~~ 323 (352)
..
T Consensus 626 ~~ 627 (758)
T 3ott_A 626 LE 627 (758)
T ss_dssp --
T ss_pred hc
Confidence 54
No 108
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.77 E-value=0.055 Score=47.77 Aligned_cols=177 Identities=10% Similarity=0.052 Sum_probs=80.1
Q ss_pred CeEEEEECCCCeeEecCCCC-Ccce--eeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-E
Q 045821 136 SEVYCYDASMNTWTDAAPMS-TARC--YFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-M 210 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~~~~~~-~~r~--~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~ 210 (352)
..+.+||..+++-..+.... ..+. -.+++.. +++.++.|+.+ ..+.+||..+.+-...-...... ...++. .
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d--g~v~iwd~~~~~~~~~~~~h~~~-v~~v~~s~ 191 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD--FSVKVWDLSQKAVLKSYNAHSSE-VNCVAACP 191 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT--SCEEEEETTTTEEEEEECCCSSC-EEEEEECT
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC--CeEEEEECCCCcEEEEEcCCCCC-EEEEEEcc
Confidence 45788888776533222211 0111 1112222 56677777765 67899999987643321111111 112222 2
Q ss_pred CC-EEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE---CCEEEEEecCCCCeEEEEeCCCCceEEcc
Q 045821 211 DG-KIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV---DDALYVLDQSSGTKLMMWQKESREWSPVG 286 (352)
Q Consensus 211 ~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~~~gg~~~~~v~~yd~~~~~W~~~~ 286 (352)
++ .+++.++.++ .+..||..+.+-...............+.+ ++.+++.|+.++ .+.+||..+.+-...-
T Consensus 192 ~~~~~~~s~~~dg-----~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 192 GKDTIFLSCGEDG-----RILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-NVSLVNIKNPDSAQTS 265 (357)
T ss_dssp TCSSCEEEEETTS-----CEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-CEEEEESSCGGGCEEE
T ss_pred CCCceeeeeccCC-----ceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-ceeEEECCCCcEeEEE
Confidence 33 4666665543 477788876553322111111111112332 456777777665 8999998865422111
Q ss_pred CCCCCcCCCCceEEE--eCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 287 RLSTLLTRPPCKLVA--IGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 287 ~~~~~~~~~~~~~~~--~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
... .....+++. .++++++.|+.+ .+.++|++...
T Consensus 266 ~~~---~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 266 AVH---SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp CCC---SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ecc---ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 111 111122222 234555556554 46678887643
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.013 Score=57.53 Aligned_cols=189 Identities=7% Similarity=0.001 Sum_probs=98.7
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--C--CEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--N--QKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
+..++.|+. ...+.+||..++++..+..+......-..+.+ + +..++.|+.+ ..+.+||..++.|..+
T Consensus 21 g~~latg~~------dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D--g~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 21 GKRLATCSS------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--GKVLIWKEENGRWSQI 92 (753)
T ss_dssp SCCEEEEET------TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT--SCEEEEEEETTEEEEE
T ss_pred CCeEEEEEC------CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC--CeEEEEECCCCccccc
Confidence 445555543 24577888876666655443322221222222 3 6667777765 6789999999887666
Q ss_pred cCCCCcccceeEEEE--C--CEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--------------
Q 045821 196 TEPNIFTEIEDSFVM--D--GKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV-------------- 257 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~--~--g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-------------- 257 (352)
............+.+ + +.+++.|+.++ .+..||..+..-...............+..
T Consensus 93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~ 167 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------C
T ss_pred ccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccC
Confidence 543322222222222 3 67777766553 577888766522111000000000111111
Q ss_pred -CCEEEEEecCCCCeEEEEeCCCC--ceEEccCCCCCcCCCCceEEE-eC---CEEEEEcCCce-EEEEEcCCc
Q 045821 258 -DDALYVLDQSSGTKLMMWQKESR--EWSPVGRLSTLLTRPPCKLVA-IG---KTIFVIGKGCS-AVVIDVGNI 323 (352)
Q Consensus 258 -~~~l~~~gg~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~-~~---~~i~v~gG~~~-~~~~d~~~~ 323 (352)
++.+++.|+.++ .+.+||..++ .+..+..+... .....++.. .+ +++++.|+.+. +.+||+...
T Consensus 168 ~d~~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 168 KESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp GGGCCEEEEETTS-CEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCCEEEEEECCC-eEEEEeccCCcccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 366777777766 7888887654 34443332211 111122222 23 67777776654 668998764
No 110
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.74 E-value=0.14 Score=44.60 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=36.0
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEec-CCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDA-APMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~-~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
++.+++.|+.+ ..+.+||..+++-... ..+...........+ ++..++.|+.+ ..+.+||..+.+
T Consensus 127 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~ 194 (366)
T 3k26_A 127 DPNLLLSVSKD------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD--HSLKLWRINSKR 194 (366)
T ss_dssp CTTEEEEEETT------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT--SCEEEEESCSHH
T ss_pred CCCEEEEEeCC------CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC--CCEEEEECCCCc
Confidence 45666666643 4588899988764332 211111111122222 45566666655 678899988653
No 111
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.70 E-value=0.11 Score=46.37 Aligned_cols=149 Identities=10% Similarity=0.038 Sum_probs=75.7
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCc----ceeeeeEEE--CC-EEEEEeCCCCC-CceEEEeCCCCc
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTA----RCYFPCGVL--NQ-KIYCIGGLGDT-HSWDVYDPRTNN 191 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~----r~~~~~~~~--~~-~iyv~gG~~~~-~~v~~yd~~t~~ 191 (352)
+.+++.|+.+ ..+.+||..+++-...-..... ........+ ++ .+++.++.+.. ..+.+||..+..
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred CcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 4577777643 4588999988764332222211 111122222 33 46666665421 378899998753
Q ss_pred EEEecCCC-CcccceeEEEE---CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECC-EEEEEec
Q 045821 192 WKLHTEPN-IFTEIEDSFVM---DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDD-ALYVLDQ 266 (352)
Q Consensus 192 W~~~~~~~-~~~~~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~~~gg 266 (352)
- .+..+. ........+.+ ++++++.|+.++ .+..||..+.+-...-.............-++ .+++.++
T Consensus 252 ~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 252 T-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp S-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC
T ss_pred C-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe
Confidence 1 111122 11111122222 677777766543 58888887664322111111111112222344 6777777
Q ss_pred CCCCeEEEEeCCCCc
Q 045821 267 SSGTKLMMWQKESRE 281 (352)
Q Consensus 267 ~~~~~v~~yd~~~~~ 281 (352)
.++ .+.+||..+..
T Consensus 326 ~d~-~i~iw~~~~~~ 339 (416)
T 2pm9_A 326 FDN-KIEVQTLQNLT 339 (416)
T ss_dssp SSS-EEEEEESCCCC
T ss_pred cCC-cEEEEEccCCC
Confidence 666 89999887644
No 112
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.69 E-value=0.2 Score=43.29 Aligned_cols=195 Identities=9% Similarity=-0.016 Sum_probs=101.5
Q ss_pred eEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCc---ceeeeeEEE--CCEEEEEeCCC--------
Q 045821 113 MGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTA---RCYFPCGVL--NQKIYCIGGLG-------- 177 (352)
Q Consensus 113 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~---r~~~~~~~~--~~~iyv~gG~~-------- 177 (352)
++++.. ++.||+.... ..+.++|+.+++.+.+...... .....+++- ++.+|+.....
T Consensus 83 ~gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY-------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp EEEEEETTTTEEEEEETT-------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred ceEEEcCCCCcEEEEECC-------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccc
Confidence 344544 5789987431 3478899887765554322111 111223333 57899875321
Q ss_pred -------CCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CC-EEEEEccCCCCCCceEEEEEeCCCC---ceeecCCC
Q 045821 178 -------DTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DG-KIYIRCSASAATSHVCALVYEPSTD---SWLHADAN 245 (352)
Q Consensus 178 -------~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g-~iyv~GG~~~~~~~~~i~~yd~~~~---~W~~~~~~ 245 (352)
....+++||+.+.+.+.+..- .......+.. ++ .||+.-.. ...|++|+.... ..+.+..
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~- 227 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVK- 227 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEE-
T ss_pred eehcccCCCceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEe-
Confidence 115689999988876554211 1111122332 44 58887321 136889988653 3333221
Q ss_pred CCCCCCCcEEEECCEEEEEecC--------C-CCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCC-ceE
Q 045821 246 MASGWRGPAVVVDDALYVLDQS--------S-GTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKG-CSA 315 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~gg~--------~-~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~-~~~ 315 (352)
.+. -.+.++.-+|.||+.... . ...+.+||++.+.-..+............+++..+++||+.+.. ..+
T Consensus 228 ~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i 306 (322)
T 2fp8_A 228 IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSV 306 (322)
T ss_dssp CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEE
T ss_pred CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCce
Confidence 111 011122235678877533 0 13699999986655555422111122334455578999998643 356
Q ss_pred EEEEcCCc
Q 045821 316 VVIDVGNI 323 (352)
Q Consensus 316 ~~~d~~~~ 323 (352)
..|+++..
T Consensus 307 ~~~~~~~~ 314 (322)
T 2fp8_A 307 GILVYDKK 314 (322)
T ss_dssp EEEEC---
T ss_pred EEEecccc
Confidence 67887643
No 113
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.66 E-value=0.27 Score=42.25 Aligned_cols=189 Identities=9% Similarity=0.057 Sum_probs=87.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECC--CCeeEecCCCCCcceeeeeEEE-CC-EEEEEeCCCCCCceEEEeCCCCc-EE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDAS--MNTWTDAAPMSTARCYFPCGVL-NQ-KIYCIGGLGDTHSWDVYDPRTNN-WK 193 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~--t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~~-W~ 193 (352)
+..+|+.+.. ...+.+|+.. ++++..+..++.+.....++.. ++ .+|+.+..+ ..+.+||..++. .+
T Consensus 49 g~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~~~~~~~ 120 (343)
T 1ri6_A 49 KRYLYVGVRP------EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLEDGLPVG 120 (343)
T ss_dssp SSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEETTEEEE
T ss_pred CCEEEEeecC------CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--CeEEEEECCCCcccc
Confidence 3346665432 2567777766 6777655443322221222222 34 466665422 568888884221 22
Q ss_pred EecCCCCcccceeE-EEECC-EEEEEccCCCCCCceEEEEEeCCC-CceeecC--CC-CCCCCCCcEE--EECCE-EEEE
Q 045821 194 LHTEPNIFTEIEDS-FVMDG-KIYIRCSASAATSHVCALVYEPST-DSWLHAD--AN-MASGWRGPAV--VVDDA-LYVL 264 (352)
Q Consensus 194 ~~~~~~~~~~~~~~-~~~~g-~iyv~GG~~~~~~~~~i~~yd~~~-~~W~~~~--~~-~~~~~~~~~~--~~~~~-l~~~ 264 (352)
.+............ ..-++ .||+.+... ..+..||..+ .+...+. .. .........+ .-+++ +|+.
T Consensus 121 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~ 195 (343)
T 1ri6_A 121 VVDVVEGLDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV 195 (343)
T ss_dssp EEEEECCCTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred ccccccCCCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEE
Confidence 22211111111222 22244 577764222 2588888876 6665322 10 1111111112 22454 6666
Q ss_pred ecCCCCeEEEEeCC--CCceEEc---cCCCCCcC-C-CCceEEE-e-CCEEEEEc-CCceEEEEEcC
Q 045821 265 DQSSGTKLMMWQKE--SREWSPV---GRLSTLLT-R-PPCKLVA-I-GKTIFVIG-KGCSAVVIDVG 321 (352)
Q Consensus 265 gg~~~~~v~~yd~~--~~~W~~~---~~~~~~~~-~-~~~~~~~-~-~~~i~v~g-G~~~~~~~d~~ 321 (352)
+...+ .+.+||.. ++.+..+ ..++.... . ....+.. . +..||+.+ +...+.+||+.
T Consensus 196 ~~~~~-~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 196 NELNS-SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ETTTT-EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eCCCC-EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 54444 89999885 3444332 33332111 1 1112222 2 44677665 34457789987
No 114
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.65 E-value=0.034 Score=47.71 Aligned_cols=190 Identities=10% Similarity=0.059 Sum_probs=97.3
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++.+|+..-. ...+++||+.+++...+.. +. + -.+.+.. ++++++..+ ..+.+||+.+++++.+..
T Consensus 24 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~~-~~-~-~~~i~~~~dG~l~v~~~----~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 24 SNSLLFVDIP------AKKVCRWDSFTKQVQRVTM-DA-P-VSSVALRQSGGYVATIG----TKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp TTEEEEEETT------TTEEEEEETTTCCEEEEEC-SS-C-EEEEEEBTTSSEEEEET----TEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEeC-CC-c-eEEEEECCCCCEEEEEC----CeEEEEECCCCcEEEEEe
Confidence 4678887632 3578999999876544322 11 1 1122222 567777653 679999999998887654
Q ss_pred CCCc---ccceeE-EEECCEEEEEccCCC------CCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECC-EEEEEec
Q 045821 198 PNIF---TEIEDS-FVMDGKIYIRCSASA------ATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDD-ALYVLDQ 266 (352)
Q Consensus 198 ~~~~---~~~~~~-~~~~g~iyv~GG~~~------~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~~~gg 266 (352)
.... ...... +.-+|++|+..-... ......++++|+. .+...+....... .+.+..-++ .||+...
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~p-ngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDIS-NGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBE-EEEEECTTSCEEEEEEG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccc-cceEEcCCCCEEEEecC
Confidence 3221 111122 223788887521111 0123478888875 3333321111000 111122244 5777765
Q ss_pred CCCCeEEEEeC--CCCceEE---ccCCCCCcCCCCceEEE-eCCEEEEEc-CCceEEEEEcCCccc
Q 045821 267 SSGTKLMMWQK--ESREWSP---VGRLSTLLTRPPCKLVA-IGKTIFVIG-KGCSAVVIDVGNIGN 325 (352)
Q Consensus 267 ~~~~~v~~yd~--~~~~W~~---~~~~~~~~~~~~~~~~~-~~~~i~v~g-G~~~~~~~d~~~~~w 325 (352)
..+ .|++||. .++.... +..++.. ...-.+++. -++.||+-. +...+..||+++...
T Consensus 169 ~~~-~i~~~~~d~~~G~~~~~~~~~~~~~~-~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 169 LSY-SVDAFDYDLQTGQISNRRSVYKLEKE-EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR 232 (297)
T ss_dssp GGT-EEEEEEECTTTCCEEEEEEEEECCGG-GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE
T ss_pred CCC-cEEEEeccCCCCcccCcEEEEECCCC-CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE
Confidence 444 8999876 4554432 1122210 011123333 356788764 333577788875443
No 115
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.64 E-value=0.53 Score=45.63 Aligned_cols=117 Identities=21% Similarity=0.241 Sum_probs=72.4
Q ss_pred EEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCc--------ceeeeeEEECCEEEEEeCCCCCCceEEE
Q 045821 116 EVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTA--------RCYFPCGVLNQKIYCIGGLGDTHSWDVY 185 (352)
Q Consensus 116 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~gG~~~~~~v~~y 185 (352)
++.++.||+... ...++.+|..|++ |+.-...+.. ....+.++.+++||+.... ..+..+
T Consensus 67 ~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d---g~l~Al 136 (689)
T 1yiq_A 67 IVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD---GRLEAI 136 (689)
T ss_dssp EEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT---SEEEEE
T ss_pred EEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC---CEEEEE
Confidence 467999999753 3568999998876 8765433211 0122346678999886532 678999
Q ss_pred eCCCCc--EEEecC-CCCc--ccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc--eeec
Q 045821 186 DPRTNN--WKLHTE-PNIF--TEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHA 242 (352)
Q Consensus 186 d~~t~~--W~~~~~-~~~~--~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~ 242 (352)
|..|++ |+.-.. .... ......++.++.+|+-.+.........+..||..+++ |+.-
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 137 DAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp ETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 998874 876542 1111 1122335678998885332221223379999998775 8753
No 116
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.64 E-value=0.13 Score=50.52 Aligned_cols=186 Identities=8% Similarity=-0.007 Sum_probs=90.6
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCC-cEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTN-NWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~-~W~~~ 195 (352)
++..++.|+. ...+.+||..+++... +.....+ . .+++. -++...+.|+.+ ..+.+||..++ .....
T Consensus 66 ~~~~l~~~~~------dg~i~vw~~~~~~~~~~~~~~~~~-v-~~~~~s~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 66 RKNWIIVGSD------DFRIRVFNYNTGEKVVDFEAHPDY-I-RSIAVHPTKPYVLSGSDD--LTVKLWNWENNWALEQT 135 (814)
T ss_dssp GGTEEEEEET------TSEEEEEETTTCCEEEEEECCSSC-E-EEEEECSSSSEEEEEETT--SEEEEEEGGGTSEEEEE
T ss_pred CCCEEEEEeC------CCeEEEEECCCCcEEEEEecCCCC-E-EEEEEeCCCCEEEEEcCC--CEEEEEECCCCceEEEE
Confidence 4555666653 3568899988876432 2211111 1 11111 145555555544 67889998776 22222
Q ss_pred cCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEEE--CCEEEEEecCCCC
Q 045821 196 TEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVVV--DDALYVLDQSSGT 270 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~--~~~l~~~gg~~~~ 270 (352)
-.. ....-..++.. ++.+++.|+.++ .+..||..+..-... ............... ++..++.|+.++
T Consensus 136 ~~~-~~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg- 208 (814)
T 3mkq_A 136 FEG-HEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL- 208 (814)
T ss_dssp EEC-CSSCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTS-
T ss_pred EcC-CCCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCC-
Confidence 111 11111222333 466777765543 578888765432211 111111111111222 677777777666
Q ss_pred eEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 271 KLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
.+.+||..+++-...-.... ....++. ..++.+++.|+.+ .+.+||+.+..
T Consensus 209 ~i~~~d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 209 TIKIWDYQTKSCVATLEGHM---SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp EEEEEETTTTEEEEEEECCS---SCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred EEEEEECCCCcEEEEEcCCC---CCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 89999988765332211110 1111222 2345555555544 46678877643
No 117
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.60 E-value=0.3 Score=41.94 Aligned_cols=218 Identities=11% Similarity=0.058 Sum_probs=108.1
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.||+.-. ..-.++.+|+ .+. .......+. .-+.++.. ++.+|+...... ...++.+|+.++
T Consensus 42 ~g~lyv~d~----~~~~I~~~d~--~g~-~~~~~~~~~-----~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~~g 105 (306)
T 2p4o_A 42 DGTIFVTNH----EVGEIVSITP--DGN-QQIHATVEG-----KVSGLAFTSNGDLVATGWNAD----SIPVVSLVKSDG 105 (306)
T ss_dssp TSCEEEEET----TTTEEEEECT--TCC-EEEEEECSS-----EEEEEEECTTSCEEEEEECTT----SCEEEEEECTTS
T ss_pred CCCEEEEeC----CCCeEEEECC--CCc-eEEEEeCCC-----CceeEEEcCCCcEEEEeccCC----cceEEEEcCCCC
Confidence 566888732 2235788898 653 333323321 12333333 567888753211 135888998888
Q ss_pred eeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCc---EEEec-----CC-CCcccceeEEEECCEEEE
Q 045821 147 TWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNN---WKLHT-----EP-NIFTEIEDSFVMDGKIYI 216 (352)
Q Consensus 147 ~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~---W~~~~-----~~-~~~~~~~~~~~~~g~iyv 216 (352)
+...+...+..+.....+.. ++.+|+..... ..++++|+.+.. |..-. .. ...........-++.||+
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~--g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv 183 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYR--GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYV 183 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTT--TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEE
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCC--CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEE
Confidence 87766554443333333333 45677765322 678999987642 21111 00 011111223333558998
Q ss_pred EccCCCCCCceEEEEEeCCC-CceeecCCCCC-CCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCC
Q 045821 217 RCSASAATSHVCALVYEPST-DSWLHADANMA-SGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTR 294 (352)
Q Consensus 217 ~GG~~~~~~~~~i~~yd~~~-~~W~~~~~~~~-~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~ 294 (352)
.-.. ...|++||... .+......... ..-.+.++.-+|.||+..... +.|.+||++ ++...+...+.. ..
T Consensus 184 ~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~-~~V~~~~~~-G~~~~~~~~~~~-~~ 255 (306)
T 2p4o_A 184 SNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIY-NSVVRIAPD-RSTTIIAQAEQG-VI 255 (306)
T ss_dssp EETT-----TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTT-CCEEEECTT-CCEEEEECGGGT-CT
T ss_pred EeCC-----CCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCC-CeEEEECCC-CCEEEEeecccc-cC
Confidence 7422 23688998764 22211100000 011222333467888775433 389999997 444444322211 11
Q ss_pred CCceEEEe-----CCEEEEEcC
Q 045821 295 PPCKLVAI-----GKTIFVIGK 311 (352)
Q Consensus 295 ~~~~~~~~-----~~~i~v~gG 311 (352)
.-.+++.- ++.|||...
T Consensus 256 ~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 256 GSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TEEEEEECCSTTTTTEEEEEEC
T ss_pred CceEEEEecccCCCCEEEEECC
Confidence 12233322 367888753
No 118
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.58 E-value=0.38 Score=42.99 Aligned_cols=211 Identities=8% Similarity=0.035 Sum_probs=115.3
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceee
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYF 161 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~ 161 (352)
.+..+++ .......+.... ....+++.. ++.||+..- ....++++++.......+...... ...
T Consensus 97 ~I~~i~~--~~~~~~~~~~~~-----~~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~~~~~~~~-~p~ 162 (386)
T 3v65_B 97 DIRQVLP--HRSEYTLLLNNL-----ENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEEVVSTGLE-SPG 162 (386)
T ss_dssp CEEEECT--TSCCCEEEECSC-----SCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCCEEEEECSSCS-CCC
T ss_pred cceeecc--CCCcEEEEecCC-----CccEEEEEecCCCeEEEEeC------CCCcEEEEecCCCCcEEEEeCCCC-Ccc
Confidence 4566677 666655554322 112334433 578998853 246789999987765544221111 112
Q ss_pred eeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCC
Q 045821 162 PCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTD 237 (352)
Q Consensus 162 ~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~ 237 (352)
.+++ .++.||+.-... ..++++++....-+.+.... ...-...++. ++.||+.--.. ...|+++++...
T Consensus 163 glavd~~~g~lY~~d~~~--~~I~~~~~dg~~~~~l~~~~-l~~P~giavdp~~g~ly~td~~~----~~~I~r~~~dG~ 235 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSGT--SRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGN----TPRIEASSMDGS 235 (386)
T ss_dssp CEEEETTTTEEEEEETTT--TEEEECBTTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred EEEEEeCCCeEEEEcCCC--CeEEEEeCCCCceEEeecCC-CCCCcEEEEEcCCCeEEEeccCC----CCEEEEEeCCCC
Confidence 3333 368999986543 67888888765433332111 1111233333 68999973211 247899988654
Q ss_pred ceeec-CCCCCCCCCCcEEE-ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-CCce
Q 045821 238 SWLHA-DANMASGWRGPAVV-VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG-KGCS 314 (352)
Q Consensus 238 ~W~~~-~~~~~~~~~~~~~~-~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g-G~~~ 314 (352)
.-+.+ ......+ .+.++. .++.||+.....+ .|+++|++...-..+.... ...-.++++.++.||+.. +...
T Consensus 236 ~~~~~~~~~~~~P-nGlavd~~~~~lY~aD~~~~-~I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~ 310 (386)
T 3v65_B 236 GRRIIADTHLFWP-NGLTIDYAGRRMYWVDAKHH-VIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKS 310 (386)
T ss_dssp SCEEEECSSCSCE-EEEEEEGGGTEEEEEETTTT-EEEEECTTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTE
T ss_pred CcEEEEECCCCCe-eeEEEeCCCCEEEEEECCCC-EEEEEeCCCCeeEEEEECC---CCCceEEEEECCEEEEeeCCCCe
Confidence 33332 1111000 111222 3789999976554 8999998764433332211 123356777889999875 4445
Q ss_pred EEEEEc
Q 045821 315 AVVIDV 320 (352)
Q Consensus 315 ~~~~d~ 320 (352)
+..+|.
T Consensus 311 V~~~~~ 316 (386)
T 3v65_B 311 INSANK 316 (386)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 666774
No 119
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.58 E-value=0.074 Score=44.55 Aligned_cols=191 Identities=10% Similarity=-0.085 Sum_probs=93.3
Q ss_pred eEEEecCCCCC-CCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeee
Q 045821 84 CCYVLDPNSTR-RSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFP 162 (352)
Q Consensus 84 ~~~~~d~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~ 162 (352)
.++++|. .+ .....+..... ...........++..+++++... .....++.+|..+++...+..... ...
T Consensus 63 ~i~~~d~--~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~---~~~ 133 (297)
T 2ojh_A 63 LLYRLSL--AGDPSPEKVDTGFA--TICNNDHGISPDGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKNLP---SYW 133 (297)
T ss_dssp EEEEEES--SSCCSCEECCCTTC--CCBCSCCEECTTSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSSSS---EEE
T ss_pred eEEEEeC--CCCCCceEeccccc--cccccceEECCCCCEEEEEEeCC--CCcceEEEEECCCCceEEeecCCC---ccc
Confidence 5777788 77 66555543221 01111122223455445544221 135788999988777555543322 112
Q ss_pred eEEE-CC-EEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee
Q 045821 163 CGVL-NQ-KIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL 240 (352)
Q Consensus 163 ~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~ 240 (352)
.+.. ++ .+++.++.+....++.+|..+.....+..... ........-+++..++++.. .....++.++.......
T Consensus 134 ~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~--~~~~~i~~~~~~~~~~~ 210 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG-RNDGPDYSPDGRWIYFNSSR--TGQMQIWRVRVDGSSVE 210 (297)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS-CEEEEEECTTSSEEEEEECT--TSSCEEEEEETTSSCEE
T ss_pred eEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC-ccccceECCCCCEEEEEecC--CCCccEEEECCCCCCcE
Confidence 2222 34 45545543322456777787777666543221 11111222256544433322 12347888887777776
Q ss_pred ecCCCCCCCCCCcEEEECCEEEEEecCCC----------CeEEEEeCCCCceEEccC
Q 045821 241 HADANMASGWRGPAVVVDDALYVLDQSSG----------TKLMMWQKESREWSPVGR 287 (352)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~~gg~~~----------~~v~~yd~~~~~W~~~~~ 287 (352)
.+..... ........-+++.+++++..+ ..+++||..+++...+..
T Consensus 211 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 211 RITDSAY-GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp ECCCCSE-EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred EEecCCc-ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 6643210 000111222555444433221 369999999887766543
No 120
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.21 Score=43.40 Aligned_cols=150 Identities=9% Similarity=0.020 Sum_probs=70.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCC---CCceEEEeCCCCc---
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGD---THSWDVYDPRTNN--- 191 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~---~~~v~~yd~~t~~--- 191 (352)
++..++.++. ...+.+||..+++-...-....+ -..++.. ++..++.++.+. ...+.+||..+..
T Consensus 85 ~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~ 156 (369)
T 3zwl_B 85 FTKYCVTGSA------DYSIKLWDVSNGQCVATWKSPVP--VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATH 156 (369)
T ss_dssp TSSEEEEEET------TTEEEEEETTTCCEEEEEECSSC--EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTC
T ss_pred CCCEEEEEeC------CCeEEEEECCCCcEEEEeecCCC--eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccce
Confidence 4555566653 34688899887764332222211 1111121 445555544331 1466777766442
Q ss_pred -EEEecCCCCc-----cc--ceeEE--EECCEEEEEccCCCCCCceEEEEEeCCC-Ccee-ecCCCCCCCCCCcEEEECC
Q 045821 192 -WKLHTEPNIF-----TE--IEDSF--VMDGKIYIRCSASAATSHVCALVYEPST-DSWL-HADANMASGWRGPAVVVDD 259 (352)
Q Consensus 192 -W~~~~~~~~~-----~~--~~~~~--~~~g~iyv~GG~~~~~~~~~i~~yd~~~-~~W~-~~~~~~~~~~~~~~~~~~~ 259 (352)
+......+.. .. ....+ .-+++.++.|+.++ .+..||..+ .+-. .+.. ...........-++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 157 ELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDL 230 (369)
T ss_dssp CEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTS
T ss_pred eecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEec-CCCceeEEEECCCC
Confidence 2221111100 00 11112 22566666655442 588899876 3322 2211 11111111122266
Q ss_pred EEEEEecCCCCeEEEEeCCCCceE
Q 045821 260 ALYVLDQSSGTKLMMWQKESREWS 283 (352)
Q Consensus 260 ~l~~~gg~~~~~v~~yd~~~~~W~ 283 (352)
..++.++.++ .+.+||..+.+..
T Consensus 231 ~~l~~~~~d~-~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 231 TYFITSSRDT-NSFLVDVSTLQVL 253 (369)
T ss_dssp SEEEEEETTS-EEEEEETTTCCEE
T ss_pred CEEEEecCCc-eEEEEECCCCcee
Confidence 6677776665 8999999876644
No 121
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.57 E-value=0.078 Score=47.76 Aligned_cols=146 Identities=10% Similarity=0.039 Sum_probs=77.0
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++.+++.|+.+ ..+.+||..+++....-....... .+++. -++.+++.|+.+ ..+.+||..+..-.. .
T Consensus 119 ~~~~l~s~s~D------g~i~vwd~~~~~~~~~l~~h~~~V-~~v~~~~~~~~l~sgs~D--~~i~iwd~~~~~~~~--~ 187 (410)
T 1vyh_C 119 VFSVMVSASED------ATIKVWDYETGDFERTLKGHTDSV-QDISFDHSGKLLASCSAD--MTIKLWDFQGFECIR--T 187 (410)
T ss_dssp SSSEEEEEESS------SCEEEEETTTCCCCEEECCCSSCE-EEEEECTTSSEEEEEETT--SCCCEEETTSSCEEE--C
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEeccCCcE-EEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceeE--E
Confidence 34566666543 457888988775332111111111 11222 256777777766 677888887765322 2
Q ss_pred CCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEE--EECCEEEEEecCCCCeEE
Q 045821 198 PNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAV--VVDDALYVLDQSSGTKLM 273 (352)
Q Consensus 198 ~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~--~~~~~l~~~gg~~~~~v~ 273 (352)
+........++.+ ++..++.|+.++ .+..||..+..-...-. .+......+ ..++.+++.|+.++ .+.
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~~~~~~~~--~h~~~v~~~~~~~~g~~l~s~s~D~-~v~ 259 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTGYCVKTFT--GHREWVRMVRPNQDGTLIASCSNDQ-TVR 259 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCCEEEEEE--CCSSCEEEEEECTTSSEEEEEETTS-CEE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEe--CCCccEEEEEECCCCCEEEEEcCCC-eEE
Confidence 2221111222222 566667766553 57888887765432111 011001112 23567777777666 899
Q ss_pred EEeCCCCceE
Q 045821 274 MWQKESREWS 283 (352)
Q Consensus 274 ~yd~~~~~W~ 283 (352)
+||..+....
T Consensus 260 vwd~~~~~~~ 269 (410)
T 1vyh_C 260 VWVVATKECK 269 (410)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcee
Confidence 9999876643
No 122
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.57 E-value=0.24 Score=42.29 Aligned_cols=185 Identities=9% Similarity=0.050 Sum_probs=88.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeE-ecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWT-DAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~-~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++..++.|+. ...+.+||..+++-. .+..... .-.+++.. ++.+++.|+.+ ..+.+||..++. ....
T Consensus 66 ~~~~l~s~s~------d~~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sgs~D--~~v~lWd~~~~~-~~~~ 134 (304)
T 2ynn_A 66 RKNWIIVGSD------DFRIRVFNYNTGEKVVDFEAHPD--YIRSIAVHPTKPYVLSGSDD--LTVKLWNWENNW-ALEQ 134 (304)
T ss_dssp GGTEEEEEET------TSEEEEEETTTCCEEEEEECCSS--CEEEEEECSSSSEEEEEETT--SCEEEEEGGGTT-EEEE
T ss_pred CCCEEEEECC------CCEEEEEECCCCcEEEEEeCCCC--cEEEEEEcCCCCEEEEECCC--CeEEEEECCCCc-chhh
Confidence 4455556653 356888898876532 2211111 11122222 45666666655 678889887652 1111
Q ss_pred CCCCcccceeEEEE---CCEEEEEccCCCCCCceEEEEEeCCCCce--eecCCCCCCCCCCcEEEE----CCEEEEEecC
Q 045821 197 EPNIFTEIEDSFVM---DGKIYIRCSASAATSHVCALVYEPSTDSW--LHADANMASGWRGPAVVV----DDALYVLDQS 267 (352)
Q Consensus 197 ~~~~~~~~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~~~~~----~~~l~~~gg~ 267 (352)
.+........++.+ ++.+++.|+.++ .+..||..+..- ..... .......+.. ++.+++.|+.
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTG---QERGVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCSSCSEEEECC---CTTCEEEEEECCSTTCCEEEEEET
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCCCccceeccC---CcCcEEEEEEEEcCCCCEEEEEcC
Confidence 11111111122222 456777766553 577788754321 11110 0001111211 4566677776
Q ss_pred CCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCce-EEEEEcCCccc
Q 045821 268 SGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCS-AVVIDVGNIGN 325 (352)
Q Consensus 268 ~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~-~~~~d~~~~~w 325 (352)
++ .+.+||..+.+-.. .+........+.....++.+++-|+.+. +.++|+++..-
T Consensus 207 D~-~i~iWd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 207 DL-TIKIWDYQTKSCVA--TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp TS-EEEEEETTTTEEEE--EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CC-eEEEEeCCCCccce--eeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 66 89999998765322 1111000111112223455666666554 56899876543
No 123
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.56 E-value=0.12 Score=45.75 Aligned_cols=175 Identities=6% Similarity=0.001 Sum_probs=90.9
Q ss_pred CeEEEEECCCCeeEecCCCC-CcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCccc--ceeEEEE
Q 045821 136 SEVYCYDASMNTWTDAAPMS-TARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTE--IEDSFVM 210 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~--~~~~~~~ 210 (352)
..+.+||..+.+........ ....-.+++.. ++..++.++.+ ..+.+||..+.....+........ ...+..-
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR--GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT--TEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC--CEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 45788888877655443321 11111222222 34666666655 678899999877666543222111 1122233
Q ss_pred CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECCE-EEEEecCCCCeEEEEeCCC----CceE
Q 045821 211 DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDDA-LYVLDQSSGTKLMMWQKES----REWS 283 (352)
Q Consensus 211 ~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~-l~~~gg~~~~~v~~yd~~~----~~W~ 283 (352)
++++++.|+.++ .+..||.....-..+.. +......+. -+++ +++.|+.++ .+.+||..+ ....
T Consensus 174 ~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 174 SRQMLATGDSTG-----RLLLLGLDGHEIFKEKL---HKAKVTHAEFNPRCDWLMATSSVDA-TVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp TTTEEEEEETTS-----EEEEEETTSCEEEEEEC---SSSCEEEEEECSSCTTEEEEEETTS-EEEEEEGGGCCSTTCEE
T ss_pred CCCEEEEECCCC-----CEEEEECCCCEEEEecc---CCCcEEEEEECCCCCCEEEEEeCCC-EEEEEeCCCCCcccceE
Confidence 667777765542 68888885443333321 111111122 2454 777777666 899999986 3332
Q ss_pred EccCCCCCcCCCCceEEE-e-CCEEEEEcCCc-eEEEEEcCCccc
Q 045821 284 PVGRLSTLLTRPPCKLVA-I-GKTIFVIGKGC-SAVVIDVGNIGN 325 (352)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~-~-~~~i~v~gG~~-~~~~~d~~~~~w 325 (352)
..-.. .....++.. . +++.++.|+.+ .+.+||+.+..-
T Consensus 245 ~~~~~----~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 245 AEMPH----EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEC----SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEecC----CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 22111 111122222 2 45666666554 566899876553
No 124
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.29 Score=41.35 Aligned_cols=144 Identities=10% Similarity=0.048 Sum_probs=66.8
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSWLHADAN 245 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~ 245 (352)
++..++.|+.+ ..+.+||........ .. ...........- ++..++.|+.++ .+..||.... -..+...
T Consensus 113 ~~~~l~~~~~d--~~i~~~d~~~~~~~~-~~-~~~~v~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~-~~~~~~~ 182 (313)
T 3odt_A 113 QDGVVISGSWD--KTAKVWKEGSLVYNL-QA-HNASVWDAKVVSFSENKFLTASADK-----TIKLWQNDKV-IKTFSGI 182 (313)
T ss_dssp ETTEEEEEETT--SEEEEEETTEEEEEE-EC-CSSCEEEEEEEETTTTEEEEEETTS-----CEEEEETTEE-EEEECSS
T ss_pred cCCEEEEEeCC--CCEEEEcCCcEEEec-cc-CCCceeEEEEccCCCCEEEEEECCC-----CEEEEecCce-EEEEecc
Confidence 55556666655 678888833222221 11 111111112222 566666655543 4677773222 1222211
Q ss_pred CCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEe-CCEEEEEcCCceEEEEEcCCcc
Q 045821 246 MASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI-GKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 246 ~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
............++. ++.|+.++ .+.+||..+.+-...-... .....++... +++|+..+....+.+||+++..
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg-~i~i~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDG-LIKLVDMHTGDVLRTYEGH---ESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTS-EEEEEETTTCCEEEEEECC---SSCEEEEEECTTSCEEEEETTSEEEEECTTTCC
T ss_pred CcccEEEEEEcCCCe-EEEccCCC-eEEEEECCchhhhhhhhcC---CceEEEEEEecCCCEEEEecCCEEEEEECCCCc
Confidence 111111222345777 66666655 8999999876533221111 1111223222 4454444434456689887765
Q ss_pred c
Q 045821 325 N 325 (352)
Q Consensus 325 w 325 (352)
.
T Consensus 258 ~ 258 (313)
T 3odt_A 258 L 258 (313)
T ss_dssp E
T ss_pred e
Confidence 3
No 125
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.53 E-value=0.095 Score=44.60 Aligned_cols=187 Identities=7% Similarity=0.016 Sum_probs=98.0
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCC
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEP 198 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~ 198 (352)
+.+|+.+.. ...+++||+.++ .+.+.. +.. ...+++.- ++++|+..... ..+.+||+.+++.+.+...
T Consensus 40 ~~l~~~~~~------~~~i~~~~~~~~-~~~~~~-~~~-~~~~l~~~~dg~l~v~~~~~--~~i~~~d~~~g~~~~~~~~ 108 (296)
T 3e5z_A 40 SAVIFSDVR------QNRTWAWSDDGQ-LSPEMH-PSH-HQNGHCLNKQGHLIACSHGL--RRLERQREPGGEWESIADS 108 (296)
T ss_dssp TEEEEEEGG------GTEEEEEETTSC-EEEEES-SCS-SEEEEEECTTCCEEEEETTT--TEEEEECSTTCCEEEEECE
T ss_pred CEEEEEeCC------CCEEEEEECCCC-eEEEEC-CCC-CcceeeECCCCcEEEEecCC--CeEEEEcCCCCcEEEEeec
Confidence 347777642 346899999987 554432 111 11223322 67888766422 5789999988888766432
Q ss_pred CCccc----ceeEEEECCEEEEE----ccCC--------CCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEE
Q 045821 199 NIFTE----IEDSFVMDGKIYIR----CSAS--------AATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALY 262 (352)
Q Consensus 199 ~~~~~----~~~~~~~~g~iyv~----GG~~--------~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~ 262 (352)
..... ...++.-+|++|+. |... .......++.+|+. ++...+....... .+.++.-+++++
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~-~gi~~s~dg~~l 186 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP-NGLAFLPSGNLL 186 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE-EEEEECTTSCEE
T ss_pred cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC-ccEEECCCCCEE
Confidence 11111 11223337899996 3311 00112378999887 5555443211110 111222367766
Q ss_pred EEecCCCCeEEEEeCC-CCce-EEccCCCCCcCCCCceEEE-eCCEEEEEcCCceEEEEEcCC
Q 045821 263 VLDQSSGTKLMMWQKE-SREW-SPVGRLSTLLTRPPCKLVA-IGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 263 ~~gg~~~~~v~~yd~~-~~~W-~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~d~~~ 322 (352)
+.+.....+++||+. +++. .....+.. ......+++. -++.||+.. ...+.+||++.
T Consensus 187 -v~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g 246 (296)
T 3e5z_A 187 -VSDTGDNATHRYCLNARGETEYQGVHFTV-EPGKTDGLRVDAGGLIWASA-GDGVHVLTPDG 246 (296)
T ss_dssp -EEETTTTEEEEEEECSSSCEEEEEEEECC-SSSCCCSEEEBTTSCEEEEE-TTEEEEECTTS
T ss_pred -EEeCCCCeEEEEEECCCCcCcCCCeEeeC-CCCCCCeEEECCCCCEEEEc-CCeEEEECCCC
Confidence 444444489999986 5555 21111110 0111112332 367788877 55677888863
No 126
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.48 E-value=0.15 Score=44.84 Aligned_cols=137 Identities=12% Similarity=0.108 Sum_probs=70.8
Q ss_pred CCeEEEEECCCCeeEe-cCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--
Q 045821 135 TSEVYCYDASMNTWTD-AAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-- 210 (352)
Q Consensus 135 ~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-- 210 (352)
...+.+||..+++-.. +.....+-........ ++..++.|+.+ ..+.+||..+.+....-.. ......++.+
T Consensus 175 D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D--g~v~~wd~~~~~~~~~~~~--h~~~v~~v~~~p 250 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD--KKAMVWDMRSGQCVQAFET--HESDVNSVRYYP 250 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT--SCEEEEETTTCCEEEEECC--CSSCEEEEEECT
T ss_pred CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC--CeEEEEECCCCcEEEEecC--CCCCeEEEEEeC
Confidence 3568888988775322 2111111111111111 34677777766 6889999998875433211 1111112222
Q ss_pred CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEE--EECCEEEEEecCCCCeEEEEeCCCCc
Q 045821 211 DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAV--VVDDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 211 ~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~--~~~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
++.+++.|+.++ .+..||..++.-..+-...........+ ..++.+++.|+.++ .+.+||..+++
T Consensus 251 ~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~-~i~vwd~~~~~ 317 (354)
T 2pbi_B 251 SGDAFASGSDDA-----TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY-TINVWDVLKGS 317 (354)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-CEEEEETTTCS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC-cEEEEECCCCc
Confidence 567777766553 4778888766432221111111111122 23677777777665 89999987654
No 127
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.44 E-value=0.19 Score=48.55 Aligned_cols=187 Identities=11% Similarity=0.034 Sum_probs=93.2
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+++.|+. ...+.+||..+++-.. +..... .. .+++. -++..++.|+.+ ..+.+||.....=..+.
T Consensus 441 ~g~~l~sgs~------Dg~v~vwd~~~~~~~~~~~~h~~-~v-~~~~~s~~~~~l~s~s~D--~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 441 DGQFALSGSW------DGELRLWDLAAGVSTRRFVGHTK-DV-LSVAFSLDNRQIVSASRD--RTIKLWNTLGECKYTIS 510 (694)
T ss_dssp TSSEEEEEET------TSEEEEEETTTTEEEEEEECCSS-CE-EEEEECTTSSCEEEEETT--SCEEEECTTSCEEEEEC
T ss_pred CCCEEEEEeC------CCcEEEEECCCCcceeEEeCCCC-CE-EEEEEeCCCCEEEEEeCC--CEEEEEECCCCcceeec
Confidence 4566666654 3468889988775322 111111 11 11121 255666666655 67888887655322332
Q ss_pred CCCCcccc-eeEEEE--CC--EEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCe
Q 045821 197 EPNIFTEI-EDSFVM--DG--KIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTK 271 (352)
Q Consensus 197 ~~~~~~~~-~~~~~~--~g--~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~ 271 (352)
.....+.. ..++.+ ++ .+++.|+.++ .+..||..+.+-...-...........+..++++++.|+.++ .
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg-~ 584 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG-V 584 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-B
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC-e
Confidence 22122221 122222 22 3555555442 477888876654322111110000111223677788887766 8
Q ss_pred EEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCceEEEEEcCCccc
Q 045821 272 LMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGCSAVVIDVGNIGN 325 (352)
Q Consensus 272 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~d~~~~~w 325 (352)
+.+||..+.+-. ..+... ....+++ ..++.+++.+....+.++|+++..-
T Consensus 585 i~iwd~~~~~~~--~~~~~~--~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 585 VLLWDLAEGKKL--YSLEAN--SVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp CEEEETTTTEEE--ECCBCS--SCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred EEEEECCCCceE--EEecCC--CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 999999876532 222211 1112222 2345555556555677899887543
No 128
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.44 E-value=0.11 Score=45.05 Aligned_cols=190 Identities=11% Similarity=0.074 Sum_probs=98.1
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCC--CCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGD--THSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~--~~~v~~yd~~t~~W~~~ 195 (352)
++.+|+.+.. ...+++||+.+++...+.... ...-.+++.- ++++|+...... ...+.+||+.+...+.+
T Consensus 55 ~g~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVF------EGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETT------TCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECC------CCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 5678877642 357899999988876543111 1112223332 678888764321 14789999998876533
Q ss_pred -cCCCCcccceeEEE-ECCEEEEEccCC-CCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECC-EEEEEecCCC
Q 045821 196 -TEPNIFTEIEDSFV-MDGKIYIRCSAS-AATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDD-ALYVLDQSSG 269 (352)
Q Consensus 196 -~~~~~~~~~~~~~~-~~g~iyv~GG~~-~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~-~l~~~gg~~~ 269 (352)
............+. -+|++|+..... .......++++|+.+.+...+..... ....+. -++ .||+.....+
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~i~~~~dg~~l~v~~~~~~ 204 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS---VANGIALSTDEKVLWVTETTAN 204 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES---SEEEEEECTTSSEEEEEEGGGT
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC---cccceEECCCCCEEEEEeCCCC
Confidence 21111111112222 268888864221 11123479999988776665422110 111222 244 4777654333
Q ss_pred CeEEEEeCCC--CceEEcc-----CCCCCcCCCCceEEE-eCCEEEEEc-CCceEEEEEcC
Q 045821 270 TKLMMWQKES--REWSPVG-----RLSTLLTRPPCKLVA-IGKTIFVIG-KGCSAVVIDVG 321 (352)
Q Consensus 270 ~~v~~yd~~~--~~W~~~~-----~~~~~~~~~~~~~~~-~~~~i~v~g-G~~~~~~~d~~ 321 (352)
.+++||+.+ .....+. ..+.. ....+++. -++.||+.. +...+.+||++
T Consensus 205 -~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 205 -RLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp -EEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred -eEEEEEecCCCcCcccccceEEEecCCC--CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 899999854 2333221 11110 01112222 256787765 33457778874
No 129
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.43 E-value=0.15 Score=43.46 Aligned_cols=233 Identities=10% Similarity=0.026 Sum_probs=113.8
Q ss_pred CCEEEEEEe---cCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-C-CEEEEEeCCCCCCCCCCeEEEEE
Q 045821 68 ETWIYAFCR---DNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-G-KNAYLLGGCGWSEDATSEVYCYD 142 (352)
Q Consensus 68 ~~~l~~~gg---~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~d 142 (352)
++.+|+... .+....-.++.||+ .++.+..+...........-..++.. + +.+|+... ...+++||
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~--~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~~~l~~~d 98 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDL--KTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------RLGLLVVQ 98 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECT--TTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------TTEEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeC--CCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------CCCEEEEe
Confidence 567887710 00011235777898 88887765431000000111233332 4 78888754 13689999
Q ss_pred CCCCeeEec-CCCCC--cce-eeeeEEE-CCEEEEEeCCCC-------------CCceEEEeCCCCcEEEecCCCCcccc
Q 045821 143 ASMNTWTDA-APMST--ARC-YFPCGVL-NQKIYCIGGLGD-------------THSWDVYDPRTNNWKLHTEPNIFTEI 204 (352)
Q Consensus 143 ~~t~~W~~~-~~~~~--~r~-~~~~~~~-~~~iyv~gG~~~-------------~~~v~~yd~~t~~W~~~~~~~~~~~~ 204 (352)
+. ++...+ ..... +.. ...++.. ++++|+...... ...+++||+. .+...+.... ...
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~ 174 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF--QFP 174 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE--SSE
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC--CCc
Confidence 98 776655 32211 111 1223322 578888764320 1468889887 5555442110 111
Q ss_pred eeEEEE-----CC-EEEEEccCCCCCCceEEEEEeCC-CCce------eecCCCCCCCCCCcEEE--ECCEEEEEecCCC
Q 045821 205 EDSFVM-----DG-KIYIRCSASAATSHVCALVYEPS-TDSW------LHADANMASGWRGPAVV--VDDALYVLDQSSG 269 (352)
Q Consensus 205 ~~~~~~-----~g-~iyv~GG~~~~~~~~~i~~yd~~-~~~W------~~~~~~~~~~~~~~~~~--~~~~l~~~gg~~~ 269 (352)
...+.. ++ .||+..... ..+++||.. +++. ..++.... .....+. -+|.||+.....+
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~--~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPT-----KKLWSYDIKGPAKIENKKVWGHIPGTHE--GGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTT-----TEEEEEEEEETTEEEEEEEEEECCCCSS--CEEEEEEEBTTCCEEEEEETTT
T ss_pred ceEEEecccCCCCCEEEEEECCC-----CeEEEEECCCCCccccceEEEECCCCCC--CCCCceEECCCCCEEEEEcCCC
Confidence 222322 44 577774222 257888865 3433 22221100 1111222 3677887753333
Q ss_pred CeEEEEeCCCCceEEccCCCCCcCCCCceEEE-eCCE-EEEEcCC-ceEEEEEcCCcc
Q 045821 270 TKLMMWQKESREWSPVGRLSTLLTRPPCKLVA-IGKT-IFVIGKG-CSAVVIDVGNIG 324 (352)
Q Consensus 270 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~-i~v~gG~-~~~~~~d~~~~~ 324 (352)
.|.+||+++++....-..+. ....+++. .+++ ||+-... ..++.||++...
T Consensus 248 -~i~~~d~~~g~~~~~~~~~~---~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 248 -HIEVFGPDGGQPKMRIRCPF---EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp -EEEEECTTCBSCSEEEECSS---SCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred -EEEEEcCCCCcEeEEEeCCC---CCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 89999998544322212221 11223332 2444 8876543 367778887643
No 130
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.43 E-value=0.33 Score=40.55 Aligned_cols=186 Identities=9% Similarity=-0.014 Sum_probs=102.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.||+... ....++++|+....-..+..... ...+.++.- ++.+|+..... ..+.++|+....-+.+.
T Consensus 47 ~~~ly~~d~------~~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~~--~~I~~~~~~g~~~~~~~ 117 (267)
T 1npe_A 47 DKVVYWTDI------SEPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQL--DRIEVAKMDGTQRRVLF 117 (267)
T ss_dssp TTEEEEEET------TTTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEE
T ss_pred CCEEEEEEC------CCCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECCC--CEEEEEEcCCCCEEEEE
Confidence 578998853 24678999998764333221111 122334443 57999987543 67889998765433332
Q ss_pred CCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE---CCEEEEEecCCCCe
Q 045821 197 EPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV---DDALYVLDQSSGTK 271 (352)
Q Consensus 197 ~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~~~gg~~~~~ 271 (352)
... ...-...++. +++||+..... ....++++++....-+.+... .......+.+ ++.||+.....+ .
T Consensus 118 ~~~-~~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~--~~~~P~gia~d~~~~~lyv~d~~~~-~ 190 (267)
T 1npe_A 118 DTG-LVNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQD--NLGLPNGLTFDAFSSQLCWVDAGTH-R 190 (267)
T ss_dssp CSS-CSSEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECT--TCSCEEEEEEETTTTEEEEEETTTT-E
T ss_pred ECC-CCCccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEEC--CCCCCcEEEEcCCCCEEEEEECCCC-E
Confidence 211 1111233333 68999984221 123678888754433332211 1111122322 568888876544 8
Q ss_pred EEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-CCceEEEEEcCCcc
Q 045821 272 LMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG-KGCSAVVIDVGNIG 324 (352)
Q Consensus 272 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g-G~~~~~~~d~~~~~ 324 (352)
|.++|+++..-..+... ...-.+++..++.||+.. +...+..+|++...
T Consensus 191 I~~~~~~g~~~~~~~~~----~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEG----LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEEEETTEEEEEEEEEC----CCSEEEEEEETTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEecCCCceEEEecC----CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCC
Confidence 99999986443322211 112245666789999876 44567789987543
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.42 E-value=0.29 Score=41.87 Aligned_cols=236 Identities=14% Similarity=0.046 Sum_probs=106.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcc-cCCcceEEEEE-C-CEEEEEeCC---CCCCC--CCCeEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPART-LRRKGMGFEVL-G-KNAYLLGGC---GWSED--ATSEVY 139 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~-~-~~iyv~GG~---~~~~~--~~~~~~ 139 (352)
+..+|+.+.. ...++.+|. .+......-..+... ....-..++.. + +.+|+.... ..... ....+.
T Consensus 45 g~~l~v~~~~----~~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 45 GRIAYATVNK----SESLVKIDL--VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp SSEEEEEETT----TTEEEEEET--TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred CCEEEEEeCC----CCeEEEEEC--CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEE
Confidence 4567776532 234677788 776644322222100 00011122222 3 467776411 00000 247899
Q ss_pred EEECCCCeeEecCCCCCcceeeeeEEE-CC-EEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECC-EEEE
Q 045821 140 CYDASMNTWTDAAPMSTARCYFPCGVL-NQ-KIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDG-KIYI 216 (352)
Q Consensus 140 ~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g-~iyv 216 (352)
+||..+.+....-... .....++.. ++ .+|+.+ ..+.+||..+.+-...-+...... .....-++ .+|+
T Consensus 119 v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~ 190 (337)
T 1pby_B 119 LYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG-----RDLHVMDPEAGTLVEDKPIQSWEA-ETYAQPDVLAVWN 190 (337)
T ss_dssp EEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES-----SSEEEEETTTTEEEEEECSTTTTT-TTBCCCBCCCCCC
T ss_pred EEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC-----CeEEEEECCCCcEeeeeeccccCC-CceeCCCccEEee
Confidence 9999887654321111 111222222 44 466662 578999998876433221111000 00111122 2332
Q ss_pred EccCC------------CC------CCceEEEEEeCCCCceeecCCCCCCCCCC--cEEEECC-EEEEEecCCCCeEEEE
Q 045821 217 RCSAS------------AA------TSHVCALVYEPSTDSWLHADANMASGWRG--PAVVVDD-ALYVLDQSSGTKLMMW 275 (352)
Q Consensus 217 ~GG~~------------~~------~~~~~i~~yd~~~~~W~~~~~~~~~~~~~--~~~~~~~-~l~~~gg~~~~~v~~y 275 (352)
.+... .. .....+..+|+.+.+-..+... ...... ..+.-++ .+|+.. ..+.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~----~~v~~~ 265 (337)
T 1pby_B 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR-IMDVFYFSTAVNPAKTRAFGAY----NVLESF 265 (337)
T ss_dssp CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEE-ECSSCEEEEEECTTSSEEEEEE----SEEEEE
T ss_pred eccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecC-CCCCceeeEEECCCCCEEEEeC----CeEEEE
Confidence 21100 00 0011578899988765432211 111111 1122244 455542 289999
Q ss_pred eCCCCceEEccCCCCCcCCCCceEEE--eCCEEEEEcCCceEEEEEcCCcccc
Q 045821 276 QKESREWSPVGRLSTLLTRPPCKLVA--IGKTIFVIGKGCSAVVIDVGNIGNI 326 (352)
Q Consensus 276 d~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~~~d~~~~~w~ 326 (352)
|.++.+-...-..+. ...+++. -++.||+.+....+.+||+++..-.
T Consensus 266 d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 266 DLEKNASIKRVPLPH----SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp ETTTTEEEEEEECSS----CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred ECCCCcCcceecCCC----ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 998866433222221 1122222 2445777655556778999876533
No 132
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.21 Score=43.31 Aligned_cols=151 Identities=7% Similarity=-0.010 Sum_probs=73.8
Q ss_pred CCEEEEEeCCCCCCceEEEeCCC--CcEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeec
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRT--NNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHA 242 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t--~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~ 242 (352)
+++.++.|+.+ ..+.+||..+ ..++.+..+.........+.+ ++.+++.|+.++ .+..+|..++.|..+
T Consensus 118 ~g~~las~s~D--~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 118 DGYYLATCSRD--KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKDYDDDWECV 190 (330)
T ss_dssp TSCEEEEEETT--SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEEETTEEEEE
T ss_pred CCCEEEEEeCC--CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEECCCCCeeEE
Confidence 56666777665 6788898843 344443322221111122222 567777766553 366677666666544
Q ss_pred CCCCCCCCCCcEEEE--C--CEEEEEecCCCCeEEEEeCCCC------ceEEccCCCCCcCCCCceEEEeCCEEEEEcCC
Q 045821 243 DANMASGWRGPAVVV--D--DALYVLDQSSGTKLMMWQKESR------EWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKG 312 (352)
Q Consensus 243 ~~~~~~~~~~~~~~~--~--~~l~~~gg~~~~~v~~yd~~~~------~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~ 312 (352)
.....+...-..+.+ + +..++.|+.++ .+.+||..+. .|..+..++......-.++....+.+++.||.
T Consensus 191 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~ 269 (330)
T 2hes_X 191 AVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGA 269 (330)
T ss_dssp EEECCCSSCEEEEEECCSSSSCEEEEEETTS-CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEET
T ss_pred EEccCCCCcEEEEEecCCCCeeEEEEEeCCC-eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeC
Confidence 321111111111222 2 34556666655 7878876532 45555444321112222333223334444544
Q ss_pred c-eEEEEEcCCccc
Q 045821 313 C-SAVVIDVGNIGN 325 (352)
Q Consensus 313 ~-~~~~~d~~~~~w 325 (352)
+ .+.+||.....|
T Consensus 270 dg~v~iw~~~~~~~ 283 (330)
T 2hes_X 270 DGVLAVYEEVDGEW 283 (330)
T ss_dssp TSCEEEEEEETTEE
T ss_pred CCEEEEEEcCCCce
Confidence 4 466888876555
No 133
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.38 E-value=0.15 Score=45.02 Aligned_cols=183 Identities=10% Similarity=0.064 Sum_probs=84.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCE-EEEEeCCCCCCceEEEeCCC----CcE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQK-IYCIGGLGDTHSWDVYDPRT----NNW 192 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~gG~~~~~~v~~yd~~t----~~W 192 (352)
++..++.|+. ...+.+||........+.....+ -.+++.. ++. +++.|+.+ ..+.+||..+ ...
T Consensus 174 ~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~h~~~--v~~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~ 243 (383)
T 3ei3_B 174 SRQMLATGDS------TGRLLLLGLDGHEIFKEKLHKAK--VTHAEFNPRCDWLMATSSVD--ATVKLWDLRNIKDKNSY 243 (383)
T ss_dssp TTTEEEEEET------TSEEEEEETTSCEEEEEECSSSC--EEEEEECSSCTTEEEEEETT--SEEEEEEGGGCCSTTCE
T ss_pred CCCEEEEECC------CCCEEEEECCCCEEEEeccCCCc--EEEEEECCCCCCEEEEEeCC--CEEEEEeCCCCCcccce
Confidence 4555566653 35688889854433333221111 1112222 344 66667655 6788999887 333
Q ss_pred EEecCCCCcccceeEEE-E-CCEEEEEccCCCCCCceEEEEEeCCCCcee-ecCCCCC------CC----CC--CcE--E
Q 045821 193 KLHTEPNIFTEIEDSFV-M-DGKIYIRCSASAATSHVCALVYEPSTDSWL-HADANMA------SG----WR--GPA--V 255 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~-~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~-~~~~~~~------~~----~~--~~~--~ 255 (352)
..... .......+.. - ++++++.|+.++ .+..||..+.+-. .+..... .. ++ ... +
T Consensus 244 ~~~~~--~~~~v~~~~~s~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 316 (383)
T 3ei3_B 244 IAEMP--HEKPVNAAYFNPTDSTKLLTTDQRN-----EIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVA 316 (383)
T ss_dssp EEEEE--CSSCEEEEEECTTTSCEEEEEESSS-----EEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEE
T ss_pred EEEec--CCCceEEEEEcCCCCCEEEEEcCCC-----cEEEEECCCCccccccccccccccccccceEEeccCCCCceEE
Confidence 22211 1111111222 2 567777765542 5778887654321 1110000 00 00 000 1
Q ss_pred --EECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCce-EEEeCCEEEEEcCCceEEEEEcCC
Q 045821 256 --VVDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCK-LVAIGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 256 --~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~i~v~gG~~~~~~~d~~~ 322 (352)
..++++ .|+.++ .+.+||..+++....-..+.. ...... ....++++++.|+...+.+||+++
T Consensus 317 ~~s~dg~~--s~s~d~-~i~iwd~~~~~~~~~l~~~~~-~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 317 GRYPDDQL--LLNDKR-TIDIYDANSGGLVHQLRDPNA-AGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp ECBCCTTT--CTTCCC-CEEEEETTTCCEEEEECBTTB-CSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred EecCCccc--ccCCCC-eEEEEecCCCceeeeecCCCC-CceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 123333 344444 899999987765322111110 111122 223366666666644677888864
No 134
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.37 E-value=0.12 Score=46.09 Aligned_cols=189 Identities=12% Similarity=0.093 Sum_probs=93.4
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCe------eE-ecCCCCCccee-eeeEEE-C-CEEEEEeCCCCCCceEEEeCCC
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNT------WT-DAAPMSTARCY-FPCGVL-N-QKIYCIGGLGDTHSWDVYDPRT 189 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~------W~-~~~~~~~~r~~-~~~~~~-~-~~iyv~gG~~~~~~v~~yd~~t 189 (352)
+.+++.|+.+ ..+.+||..+.+ -. .+......... .+++.. + +.+++.++.+ ..+.+||..+
T Consensus 126 ~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g~v~iwd~~~ 197 (416)
T 2pm9_A 126 DNVLASGGNN------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS--NFASIWDLKA 197 (416)
T ss_dssp TTBEEEECSS------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS--SCEEEEETTT
T ss_pred CCEEEEEcCC------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC--CCEEEEECCC
Confidence 5666666543 457888887764 11 11111111111 122222 3 5677777765 6799999998
Q ss_pred CcEEEecCCCC-----cccceeEEEE-CC-EEEEEccCCCCCCceEEEEEeCCCCce--eecCCCCCCCCCCcEEEE---
Q 045821 190 NNWKLHTEPNI-----FTEIEDSFVM-DG-KIYIRCSASAATSHVCALVYEPSTDSW--LHADANMASGWRGPAVVV--- 257 (352)
Q Consensus 190 ~~W~~~~~~~~-----~~~~~~~~~~-~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~~~~~--- 257 (352)
.+-...-.... ......++.. ++ .+++.|+..+ ....+..||..+..- ..+.. .+......+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~~~~i~~~d~~~~~~~~~~~~~--~~~~~v~~~~~s~~ 273 (416)
T 2pm9_A 198 KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD--NDPSILIWDLRNANTPLQTLNQ--GHQKGILSLDWCHQ 273 (416)
T ss_dssp TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS--SSCCCCEEETTSTTSCSBCCCS--CCSSCEEEEEECSS
T ss_pred CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC--CCceEEEEeCCCCCCCcEEeec--CccCceeEEEeCCC
Confidence 76543322221 1111122222 33 5666655442 111467788766421 11110 11111112332
Q ss_pred CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCC-EEEEEcCCce-EEEEEcCCcc
Q 045821 258 DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGK-TIFVIGKGCS-AVVIDVGNIG 324 (352)
Q Consensus 258 ~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~-~i~v~gG~~~-~~~~d~~~~~ 324 (352)
++.+++.++.++ .+.+||..+.+-... +... .....++. ..++ ++++.++.+. +.+||+....
T Consensus 274 ~~~~l~s~~~dg-~v~~wd~~~~~~~~~--~~~~-~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSSGRDN-TVLLWNPESAEQLSQ--FPAR-GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEESSS-EEEEECSSSCCEEEE--EECS-SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEEeCCC-CEEEeeCCCCcccee--ecCC-CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 677788887766 899999887653221 1110 11111222 2244 6777777664 5589987654
No 135
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.36 E-value=0.25 Score=43.51 Aligned_cols=243 Identities=10% Similarity=-0.041 Sum_probs=116.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECC-EEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGK-NAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++..+++... ..+...++.+|. .+.....+...+. ..........++ .|+.... ...++++|+.++
T Consensus 46 Dg~~l~~~~~-~~g~~~l~~~d~--~~g~~~~lt~~~~---~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g 112 (388)
T 3pe7_A 46 DGSKLLFGGA-FDGPWNYYLLDL--NTQVATQLTEGRG---DNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATL 112 (388)
T ss_dssp TSCEEEEEEC-TTSSCEEEEEET--TTCEEEECCCSSC---BCSSSCEECTTSSEEEEEET-------TTEEEEEETTTC
T ss_pred CCCEEEEEEc-CCCCceEEEEeC--CCCceEEeeeCCC---CCccceEEcCCCCEEEEEeC-------CCeEEEEECCCC
Confidence 4443344432 234557888899 8887766654431 111111233344 4444432 247899999988
Q ss_pred eeEecCCCCCcceeeeeEE--ECCEEEEEe----C----------------CCCCCceEEEeCCCCcEEEecCCCCcccc
Q 045821 147 TWTDAAPMSTARCYFPCGV--LNQKIYCIG----G----------------LGDTHSWDVYDPRTNNWKLHTEPNIFTEI 204 (352)
Q Consensus 147 ~W~~~~~~~~~r~~~~~~~--~~~~iyv~g----G----------------~~~~~~v~~yd~~t~~W~~~~~~~~~~~~ 204 (352)
+-..+...+.......... -+++.++.- . ......++++|..+++-+.+..... ...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~ 191 (388)
T 3pe7_A 113 EENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLG 191 (388)
T ss_dssp CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEE
T ss_pred cceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-ccc
Confidence 7665544443322212111 133333211 0 0111678899999887666542211 112
Q ss_pred eeEEEE-CCEEEEEccCCC-CCCceEEEEEeCCCCceeecCCCCCC-CCCCcEEEECCE-EEEEecCCC-C--eEEEEeC
Q 045821 205 EDSFVM-DGKIYIRCSASA-ATSHVCALVYEPSTDSWLHADANMAS-GWRGPAVVVDDA-LYVLDQSSG-T--KLMMWQK 277 (352)
Q Consensus 205 ~~~~~~-~g~iyv~GG~~~-~~~~~~i~~yd~~~~~W~~~~~~~~~-~~~~~~~~~~~~-l~~~gg~~~-~--~v~~yd~ 277 (352)
.....- +|+..++..... ......++.+|..+.....+...... ........-+|+ |++.....+ . .+++||+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 271 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADP 271 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECT
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEec
Confidence 222333 455433322211 11234788999887766666432110 011112223554 545443322 2 4999999
Q ss_pred CCCceEEccCCCCCc----CCCCceEEEeCCEEEEE---------cCCceEEEEEcCCcc
Q 045821 278 ESREWSPVGRLSTLL----TRPPCKLVAIGKTIFVI---------GKGCSAVVIDVGNIG 324 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~----~~~~~~~~~~~~~i~v~---------gG~~~~~~~d~~~~~ 324 (352)
.+++-..+...+... ......+..-+..|++. ++...++++|++...
T Consensus 272 ~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 272 ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 998876665443200 01112333334444432 445567778877644
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.35 E-value=0.36 Score=45.34 Aligned_cols=184 Identities=10% Similarity=0.010 Sum_probs=91.3
Q ss_pred CCeEEEEECCCCeeE-ecCCC----------CCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcc
Q 045821 135 TSEVYCYDASMNTWT-DAAPM----------STARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFT 202 (352)
Q Consensus 135 ~~~~~~~d~~t~~W~-~~~~~----------~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~ 202 (352)
...+.++|..+.+-. .++.. +.++.......- +..+|+..... ..+.++|..+..-..+...+...
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~--g~i~vvd~~~~~~l~~~~i~~~~ 324 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET--GKVLLVNYKDIDNLTVTSIGAAP 324 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT--TEEEEEECTTSSSCEEEEEECCS
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC--CeEEEEEecCCCcceeEEeccCc
Confidence 356788898877532 22211 111222222222 34555554322 67888988765321111111112
Q ss_pred cceeEE-EECCE-EEEEccCCCCCCceEEEEEeCCCCceeec-CC-CCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEe
Q 045821 203 EIEDSF-VMDGK-IYIRCSASAATSHVCALVYEPSTDSWLHA-DA-NMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQ 276 (352)
Q Consensus 203 ~~~~~~-~~~g~-iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~-~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd 276 (352)
.-+..+ .-+|+ +|+.+.. ...+.++|..+++-... +. ..++...+..+.. ++.+|+.+......|.+||
T Consensus 325 ~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d 399 (543)
T 1nir_A 325 FLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIG 399 (543)
T ss_dssp SCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEE
T ss_pred CccCceECCCCCEEEEEecC-----CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEE
Confidence 222222 23565 5555321 23678899988865432 21 1222222333333 3678877754444899999
Q ss_pred CCCC-----ceEEccCCCCCcCCCCc-eEEEeCCEEEEEc--C-----CceEEEEEcCCccc
Q 045821 277 KESR-----EWSPVGRLSTLLTRPPC-KLVAIGKTIFVIG--K-----GCSAVVIDVGNIGN 325 (352)
Q Consensus 277 ~~~~-----~W~~~~~~~~~~~~~~~-~~~~~~~~i~v~g--G-----~~~~~~~d~~~~~w 325 (352)
..+. .|+.+..++.......+ ++..-+..||+-. + ...+.+||+++..-
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 8762 38777665432111111 2222345677654 2 23678899987653
No 137
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.34 E-value=0.41 Score=42.20 Aligned_cols=189 Identities=8% Similarity=-0.033 Sum_probs=89.2
Q ss_pred EEEEEeCCCCCCCCCCeEEEEECCCCe------eEecCCCC----CcceeeeeEE----ECCEE-EEEeCCCCCCceEEE
Q 045821 121 NAYLLGGCGWSEDATSEVYCYDASMNT------WTDAAPMS----TARCYFPCGV----LNQKI-YCIGGLGDTHSWDVY 185 (352)
Q Consensus 121 ~iyv~GG~~~~~~~~~~~~~~d~~t~~------W~~~~~~~----~~r~~~~~~~----~~~~i-yv~gG~~~~~~v~~y 185 (352)
..++.|+.+ ..+.+||..+++ +..+...+ .......... -++.. ++.|+.+ ..+.+|
T Consensus 82 ~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d--g~i~iw 153 (397)
T 1sq9_A 82 CLVATTSFS------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK--GTTYIW 153 (397)
T ss_dssp EEEEEEETT------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT--SCEEEE
T ss_pred cEEEEEcCC------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC--CcEEEE
Confidence 667776643 457888877665 66555442 1111122222 24555 6666655 577888
Q ss_pred eCCC------Cc---EE---EecC---C-CCccc-ceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCC
Q 045821 186 DPRT------NN---WK---LHTE---P-NIFTE-IEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANM 246 (352)
Q Consensus 186 d~~t------~~---W~---~~~~---~-~~~~~-~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~ 246 (352)
|..+ .. |. .+.. . ..... ...+... ++ +++.|+.+ ..+..||..+.+-... ....
T Consensus 154 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~ 227 (397)
T 1sq9_A 154 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFESQH 227 (397)
T ss_dssp EEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC
T ss_pred eCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEeccc
Confidence 8776 32 11 1100 0 00111 1122222 56 66665443 2588899877654322 1100
Q ss_pred CC---CCCCcEEE--ECCEEEEEecCC---CCeEEEEeCCCCceE-EccCCCCC---------cCCCCceEEE-eCCEEE
Q 045821 247 AS---GWRGPAVV--VDDALYVLDQSS---GTKLMMWQKESREWS-PVGRLSTL---------LTRPPCKLVA-IGKTIF 307 (352)
Q Consensus 247 ~~---~~~~~~~~--~~~~l~~~gg~~---~~~v~~yd~~~~~W~-~~~~~~~~---------~~~~~~~~~~-~~~~i~ 307 (352)
.+ ......+. .++++++.++.+ + .+.+||..+.+-. .+...+.. ......++.. .+++++
T Consensus 228 ~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 228 SMINNSNSIRSVKFSPQGSLLAIAHDSNSFG-CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 306 (397)
T ss_dssp ---CCCCCEEEEEECSSTTEEEEEEEETTEE-EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE
T ss_pred cccccCCccceEEECCCCCEEEEEecCCCCc-eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE
Confidence 01 11111222 256777777665 4 8999999876532 22210000 0111122222 245556
Q ss_pred EEcCCc-eEEEEEcCCcc
Q 045821 308 VIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 308 v~gG~~-~~~~~d~~~~~ 324 (352)
+.|+.+ .+.+||+....
T Consensus 307 ~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEETTSEEEEEETTTTE
T ss_pred EEEeCCCeEEEEEcCCCc
Confidence 666554 46689987654
No 138
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.33 E-value=0.14 Score=45.60 Aligned_cols=191 Identities=14% Similarity=0.150 Sum_probs=90.7
Q ss_pred EEEEEeCCCCCCCCCCeEEEEECCCCeeEecCC-CCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec-C
Q 045821 121 NAYLLGGCGWSEDATSEVYCYDASMNTWTDAAP-MSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT-E 197 (352)
Q Consensus 121 ~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~-~ 197 (352)
.+++.|+.+ ..+.+||..+++....-. ......-.+++.. ++..++.|+.+ ..+.+||+.+.+-...- .
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~ 216 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD--KRVRVIEPRKGTVVAEKDR 216 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT--SEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEcCC------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC--CcEEEEeCCCCceeeeecc
Confidence 466666543 458899998886542211 1111111122222 56666666655 67899999887643321 1
Q ss_pred CCCcc-cceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCce--eecCCCCCCCCCCcEEEECC-EEEEEecCCCCeEE
Q 045821 198 PNIFT-EIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSW--LHADANMASGWRGPAVVVDD-ALYVLDQSSGTKLM 273 (352)
Q Consensus 198 ~~~~~-~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~~~~~~~-~l~~~gg~~~~~v~ 273 (352)
..... ....+..-++++++.|... .....+..||..+..- .................-++ .|++.|+.++ .+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~l~~g~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg-~i~ 293 (402)
T 2aq5_A 217 PHEGTRPVHAVFVSEGKILTTGFSR--MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS-SIR 293 (402)
T ss_dssp SSCSSSCCEEEECSTTEEEEEEECT--TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS-CEE
T ss_pred CCCCCcceEEEEcCCCcEEEEeccC--CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC-eEE
Confidence 11111 1222233477877775211 1123688888876432 11111111111111122344 4555565454 899
Q ss_pred EEeCCCCc--eEEccCCCCCcCCCCceEEEeCCEEEEEcCCceEEEEEcCCcc
Q 045821 274 MWQKESRE--WSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 274 ~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
+||..+++ ...+..... .....++....+..+++.+.....+|+.....
T Consensus 294 i~d~~~~~~~~~~l~~~~~--~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 294 YFEITSEAPFLHYLSMFSS--KESQRGMGYMPKRGLEVNKCEIARFYKLHERK 344 (402)
T ss_dssp EEEECSSTTCEEEEEEECC--SSCCSEEEECCGGGSCGGGTEEEEEEEEETTE
T ss_pred EEEecCCCcceEeeccccc--CCcccceEEecccccceecceeEEEEEcCCCc
Confidence 99998776 444443321 11112233222222333444455567766543
No 139
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.32 E-value=0.42 Score=42.54 Aligned_cols=185 Identities=14% Similarity=0.130 Sum_probs=86.2
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEE-e
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKL-H 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~-~ 195 (352)
++..++.|+. ...+.+||..+++....-..... -..++.. ++++++.|+.+ ..+.+||..+..-.. +
T Consensus 176 ~~~~l~s~s~------d~~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~s~d--~~v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 176 SGDKLVSGSG------DRTVRIWDLRTGQCSLTLSIEDG--VTTVAVSPGDGKYIAAGSLD--RAVRVWDSETGFLVERL 245 (393)
T ss_dssp TSSEEEEEET------TSEEEEEETTTTEEEEEEECSSC--EEEEEECSTTCCEEEEEETT--SCEEEEETTTCCEEEEE
T ss_pred CCCEEEEecC------CCcEEEEECCCCeeEEEEEcCCC--cEEEEEECCCCCEEEEEcCC--CcEEEEECCCCcEEEee
Confidence 4444555543 35688899988764332211111 1122222 56777777766 678899998875432 2
Q ss_pred cCCC---Ccccc-eeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCC----------CCCCCCCcEEE--E
Q 045821 196 TEPN---IFTEI-EDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADAN----------MASGWRGPAVV--V 257 (352)
Q Consensus 196 ~~~~---~~~~~-~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~----------~~~~~~~~~~~--~ 257 (352)
.... ..+.. ...+.+ +++.++.|+.++ .+..||..+..-...... ..+...-..+. .
T Consensus 246 ~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~-----~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 320 (393)
T 1erj_A 246 DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR-----SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ 320 (393)
T ss_dssp C------CCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEEC---------------CEEEEEECCSSCEEEEEECG
T ss_pred cccccCCCCCCCCEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC
Confidence 1111 11111 112222 667777765543 466777654321110000 00000001122 2
Q ss_pred CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEe-------CCEEEEEcCCce-EEEEEcCC
Q 045821 258 DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI-------GKTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 258 ~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-------~~~i~v~gG~~~-~~~~d~~~ 322 (352)
+++.++.|+.++ .+.+||..+.+-... +.. ......++... ++.+++.|+.+. +.++|.++
T Consensus 321 ~~~~l~sgs~D~-~v~iwd~~~~~~~~~--l~~-h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 321 NDEYILSGSKDR-GVLFWDKKSGNPLLM--LQG-HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp GGCEEEEEETTS-EEEEEETTTCCEEEE--EEC-CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCEEEEEeCCC-eEEEEECCCCeEEEE--ECC-CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 556666677665 899999987653221 111 00111122221 356777776664 44666543
No 140
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.32 E-value=0.36 Score=41.16 Aligned_cols=181 Identities=13% Similarity=0.101 Sum_probs=84.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCe-eE-ecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc--E
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNT-WT-DAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN--W 192 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W~-~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~--W 192 (352)
++.+++.|+.+ ..+.+||..++. -. .+.... ..-.+++.. ++.+++.|+.+ ..+.+||..+.. .
T Consensus 108 ~~~~l~sgs~D------~~v~lWd~~~~~~~~~~~~~h~--~~v~~v~~~p~~~~~l~sgs~D--~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 108 TKPYVLSGSDD------LTVKLWNWENNWALEQTFEGHE--HFVMCVAFNPKDPSTFASGCLD--RTVKVWSLGQSTPNF 177 (304)
T ss_dssp SSSEEEEEETT------SCEEEEEGGGTTEEEEEECCCC--SCEEEEEECTTCTTEEEEEETT--SEEEEEETTCSSCSE
T ss_pred CCCEEEEECCC------CeEEEEECCCCcchhhhhcccC--CcEEEEEECCCCCCEEEEEeCC--CeEEEEECCCCCccc
Confidence 44555666543 457788876542 11 111111 111122222 34667777766 678889886543 1
Q ss_pred EEecCCCCcccceeEEEE---CCEEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCCCCCCCcEE--EECCEEEEEec
Q 045821 193 KLHTEPNIFTEIEDSFVM---DGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMASGWRGPAV--VVDDALYVLDQ 266 (352)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~--~~~~~l~~~gg 266 (352)
.... ............ ++.+.+.|+.++ .+..||..+.+-.. +.. +...-..+ .-++.+++.|+
T Consensus 178 ~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~D~-----~i~iWd~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s 247 (304)
T 2ynn_A 178 TLTT--GQERGVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGS 247 (304)
T ss_dssp EEEC--CCTTCEEEEEECCSTTCCEEEEEETTS-----EEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEE
T ss_pred eecc--CCcCcEEEEEEEEcCCCCEEEEEcCCC-----eEEEEeCCCCccceeeCC---CCCCEEEEEECCCCCEEEEEc
Confidence 1111 010111111111 455666655542 57788887654322 111 11111112 23566777777
Q ss_pred CCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE--eCCEE-EEEcCCceEEEEEcCCc
Q 045821 267 SSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA--IGKTI-FVIGKGCSAVVIDVGNI 323 (352)
Q Consensus 267 ~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i-~v~gG~~~~~~~d~~~~ 323 (352)
.++ .+.+||..+.+-...-.... ....++.. .+++. ++.|..+...++++.++
T Consensus 248 ~Dg-~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 248 EDG-TLKIWNSSTYKVEKTLNVGL---ERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (304)
T ss_dssp TTS-CEEEEETTTCCEEEEECCSS---SSEEEEEECTTCGGGCEEEEETTEEEEEECC--
T ss_pred CCC-eEEEEECCCCceeeeccCCC---ccEEEEEECCCCCceEEEEecCCceEEEEeccC
Confidence 766 89999998765443221111 11122321 23344 44555556667777654
No 141
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.32 E-value=0.064 Score=52.75 Aligned_cols=176 Identities=7% Similarity=-0.056 Sum_probs=85.3
Q ss_pred CeEEEEECCCCeeEe-cCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEE
Q 045821 136 SEVYCYDASMNTWTD-AAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKI 214 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~i 214 (352)
..+.+||..+++... +..... ........-++...++|+.+ ..+.+||..++.....-......-...+..-++..
T Consensus 35 g~v~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 111 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQVTET-PVRAGKFIARKNWIIVGSDD--FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSS-CEEEEEEEGGGTEEEEEETT--SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred CEEEEEECCCCceEEEEecCCC-cEEEEEEeCCCCEEEEEeCC--CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCE
Confidence 467888888775432 221111 11111112255566666654 67899999888754322111111111122225655
Q ss_pred EEEccCCCCCCceEEEEEeCCCC-ceeecCCCCCCCCCCcEEEE---CCEEEEEecCCCCeEEEEeCCCCceEEccCCCC
Q 045821 215 YIRCSASAATSHVCALVYEPSTD-SWLHADANMASGWRGPAVVV---DDALYVLDQSSGTKLMMWQKESREWSPVGRLST 290 (352)
Q Consensus 215 yv~GG~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~---~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~ 290 (352)
.+.|+.++ .+..||..++ .....-. .+......+.. ++.+++.++.++ .+.+||..+..-...-....
T Consensus 112 l~~~~~dg-----~i~vw~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~~dg-~v~vwd~~~~~~~~~~~~~~ 183 (814)
T 3mkq_A 112 VLSGSDDL-----TVKLWNWENNWALEQTFE--GHEHFVMCVAFNPKDPSTFASGCLDR-TVKVWSLGQSTPNFTLTTGQ 183 (814)
T ss_dssp EEEEETTS-----EEEEEEGGGTSEEEEEEE--CCSSCEEEEEEETTEEEEEEEEETTS-EEEEEETTCSSCSEEEECCC
T ss_pred EEEEcCCC-----EEEEEECCCCceEEEEEc--CCCCcEEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCcceeEEecCC
Confidence 56655432 5778887655 2222211 11111112222 466777777666 89999987654322211111
Q ss_pred CcCCCCceEEE-e--CCEEEEEcCCc-eEEEEEcCCcc
Q 045821 291 LLTRPPCKLVA-I--GKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 291 ~~~~~~~~~~~-~--~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
......+.. . ++..++.|+.+ .+.+||.....
T Consensus 184 --~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 184 --ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp --TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred --CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 011112222 2 55566666555 45578876543
No 142
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.31 E-value=0.041 Score=48.84 Aligned_cols=147 Identities=10% Similarity=0.127 Sum_probs=70.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+++.|+. ...+.+||..+.+-......+.+......... ++.+++.|+.+ ..+.+||..+..-...-
T Consensus 111 ~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~d~~~~~~~~~~ 182 (408)
T 4a11_B 111 DTGMFTSSSF------DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG--PKVQLCDLKSGSCSHIL 182 (408)
T ss_dssp CTTCEEEEET------TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS--SSEEEEESSSSCCCEEE
T ss_pred CCcEEEEEeC------CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC--CeEEEEeCCCcceeeee
Confidence 3445666653 34688899988765433322222221111111 34466666655 67899998876432211
Q ss_pred CCCCcccce-eEEEE-CCE-EEEEccCCCCCCceEEEEEeCCCCc--eeecCCC-------C---CCCCCCc--EEEE--
Q 045821 197 EPNIFTEIE-DSFVM-DGK-IYIRCSASAATSHVCALVYEPSTDS--WLHADAN-------M---ASGWRGP--AVVV-- 257 (352)
Q Consensus 197 ~~~~~~~~~-~~~~~-~g~-iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~~~~-------~---~~~~~~~--~~~~-- 257 (352)
....... ..... ++. +++.|+.++ .+..||..+.. ...+... . ....... .+.+
T Consensus 183 --~~~~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 183 --QGHRQEILAVSWSPRYDYILATASADS-----RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp --CCCCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred --cCCCCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 1111111 12222 343 666665543 47778775543 1211100 0 0011111 1222
Q ss_pred CCEEEEEecCCCCeEEEEeCCCCc
Q 045821 258 DDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 258 ~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
+++.++.++.++ .+.+||..+..
T Consensus 256 ~~~~l~~~~~dg-~i~vwd~~~~~ 278 (408)
T 4a11_B 256 DGLHLLTVGTDN-RMRLWNSSNGE 278 (408)
T ss_dssp TSSEEEEEETTS-CEEEEETTTCC
T ss_pred CCCEEEEecCCC-eEEEEECCCCc
Confidence 566666666655 78888877644
No 143
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.27 E-value=0.41 Score=39.98 Aligned_cols=190 Identities=7% Similarity=-0.061 Sum_probs=99.9
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.||+... ....++.+|+ .+..-..+.... . ..-..++.- ++.+|+... ....+.++|+..
T Consensus 47 ~~~ly~~d~----~~~~I~~~~~--~g~~~~~~~~~~---~-~~p~~ia~d~~~~~lyv~d~------~~~~I~~~~~~g 110 (267)
T 1npe_A 47 DKVVYWTDI----SEPSIGRASL--HGGEPTTIIRQD---L-GSPEGIALDHLGRTIFWTDS------QLDRIEVAKMDG 110 (267)
T ss_dssp TTEEEEEET----TTTEEEEEES--SSCCCEEEECTT---C-CCEEEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred CCEEEEEEC----CCCEEEEEec--CCCCcEEEEECC---C-CCccEEEEEecCCeEEEEEC------CCCEEEEEEcCC
Confidence 578888732 2335677787 554433332211 1 112334443 578998853 245788888875
Q ss_pred CeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEccCC
Q 045821 146 NTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSAS 221 (352)
Q Consensus 146 ~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~ 221 (352)
..-..+..... .....+++- ++++|+.........++++++....-+.+..... ..-...+.- +++||+.-..
T Consensus 111 ~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~- 187 (267)
T 1npe_A 111 TQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG- 187 (267)
T ss_dssp CSCEEEECSSC-SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT-
T ss_pred CCEEEEEECCC-CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC-
Confidence 43333221111 111233333 5899998753222578888876544333322111 111223332 5689998422
Q ss_pred CCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceE
Q 045821 222 AATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWS 283 (352)
Q Consensus 222 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~ 283 (352)
...|.++|+....-..+......+ ...+..++.||+.....+ .|.++|+.+++-.
T Consensus 188 ----~~~I~~~~~~g~~~~~~~~~~~~P--~gi~~d~~~lyva~~~~~-~v~~~d~~~g~~~ 242 (267)
T 1npe_A 188 ----THRAECLNPAQPGRRKVLEGLQYP--FAVTSYGKNLYYTDWKTN-SVIAMDLAISKEM 242 (267)
T ss_dssp ----TTEEEEEETTEEEEEEEEECCCSE--EEEEEETTEEEEEETTTT-EEEEEETTTTEEE
T ss_pred ----CCEEEEEecCCCceEEEecCCCCc--eEEEEeCCEEEEEECCCC-eEEEEeCCCCCce
Confidence 236889998654322221111111 112345888998765444 8999999876543
No 144
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.26 E-value=0.5 Score=40.84 Aligned_cols=212 Identities=9% Similarity=0.030 Sum_probs=112.8
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCC----CeeEe-cC-CCC
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASM----NTWTD-AA-PMS 155 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t----~~W~~-~~-~~~ 155 (352)
.+..+|. .+.....+.+.. ..-.+++.. ++.||+... ....++++|+.. ..... ++ .+.
T Consensus 11 ~I~~i~~--~~~~~~~~~~~~-----~~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 11 EVRKMTL--DRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp SEEEEET--TSCCCEEEECSC-----SSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSSCS
T ss_pred eEEEEEC--CCcceEehhcCC-----CceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 3455677 666555443211 122334443 578999863 246788999876 22222 21 122
Q ss_pred CcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEE
Q 045821 156 TARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALV 231 (352)
Q Consensus 156 ~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~ 231 (352)
.| ..+++ .++.||+.-... ..+.++|+....-+.+.... ...-...++ .++.||+.... ....|++
T Consensus 78 ~p---~glavd~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~-~~~P~~iavdp~~g~ly~~d~~----~~~~I~~ 147 (316)
T 1ijq_A 78 AP---DGLAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWG----TPAKIKK 147 (316)
T ss_dssp CC---CEEEEETTTTEEEEEETTT--TEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECS----SSCEEEE
T ss_pred Cc---CEEEEeecCCeEEEEECCC--CEEEEEeCCCCceEEEEECC-CCCcceEEeCCCCCEEEEEccC----CCCeEEE
Confidence 22 23344 368999986533 67899998765433332111 111123334 37899998421 1236888
Q ss_pred EeCCCCceeecCCCCCCCCCCcEE-E--ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEE
Q 045821 232 YEPSTDSWLHADANMASGWRGPAV-V--VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFV 308 (352)
Q Consensus 232 yd~~~~~W~~~~~~~~~~~~~~~~-~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v 308 (352)
+++....-+.+... ... ....+ . .++.||+.....+ .|.++|++...-..+..... ....-.+++..++.||+
T Consensus 148 ~~~dG~~~~~~~~~-~~~-~P~gla~d~~~~~lY~~D~~~~-~I~~~d~dg~~~~~~~~~~~-~~~~P~giav~~~~ly~ 223 (316)
T 1ijq_A 148 GGLNGVDIYSLVTE-NIQ-WPNGITLDLLSGRLYWVDSKLH-SISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFW 223 (316)
T ss_dssp EETTSCCEEEEECS-SCS-CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEE
T ss_pred EcCCCCCeEEEEEC-CCC-CceEEEEeccCCEEEEEECCCC-eEEEEecCCCceEEEeecCC-ccCCcEEEEEECCEEEE
Confidence 88764433333211 111 11122 2 2678999876544 89999998654444432211 12233567777889998
Q ss_pred Ec-CCceEEEEEcCC
Q 045821 309 IG-KGCSAVVIDVGN 322 (352)
Q Consensus 309 ~g-G~~~~~~~d~~~ 322 (352)
.- +...+..+|...
T Consensus 224 ~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 224 TDIINEAIFSANRLT 238 (316)
T ss_dssp EETTTTEEEEEETTT
T ss_pred EECCCCeEEEEeCCC
Confidence 75 444566677643
No 145
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.26 E-value=0.25 Score=42.89 Aligned_cols=144 Identities=15% Similarity=0.036 Sum_probs=77.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEP 198 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~ 198 (352)
++.+|+.+.. ...+++||+.+++...+.. +. .....+..-++++++... ..+.+||+.+++.+.+...
T Consensus 60 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~~-~~-~v~~i~~~~dg~l~v~~~----~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 60 SGTAWWFNIL------ERELHELHLASGRKTVHAL-PF-MGSALAKISDSKQLIASD----DGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp TTEEEEEEGG------GTEEEEEETTTTEEEEEEC-SS-CEEEEEEEETTEEEEEET----TEEEEEETTTCCEEEEECS
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEEC-CC-cceEEEEeCCCeEEEEEC----CCEEEEECCCCcEEEEeeC
Confidence 3678877632 3578999999887654432 21 111112223788888653 5689999999988776543
Q ss_pred CCcc---cceeE-EEECCEEEEEccCC-CCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECC-EEEEEecCCCCeE
Q 045821 199 NIFT---EIEDS-FVMDGKIYIRCSAS-AATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDD-ALYVLDQSSGTKL 272 (352)
Q Consensus 199 ~~~~---~~~~~-~~~~g~iyv~GG~~-~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~~~gg~~~~~v 272 (352)
.... ..... +.-+|++|+..... .......++++| +.+...+..... ...+.+..-++ .||+..... ..|
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~-~~~~i~~s~dg~~lyv~~~~~-~~I 203 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS-IPNSICFSPDGTTGYFVDTKV-NRL 203 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES-SEEEEEECTTSCEEEEEETTT-CEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc-ccCCeEEcCCCCEEEEEECCC-CEE
Confidence 2211 11122 22367888753211 111234788998 455554421110 00111122245 577765433 389
Q ss_pred EEEeCC
Q 045821 273 MMWQKE 278 (352)
Q Consensus 273 ~~yd~~ 278 (352)
++||..
T Consensus 204 ~~~d~~ 209 (326)
T 2ghs_A 204 MRVPLD 209 (326)
T ss_dssp EEEEBC
T ss_pred EEEEcc
Confidence 999975
No 146
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.24 E-value=0.47 Score=40.31 Aligned_cols=193 Identities=6% Similarity=0.045 Sum_probs=87.4
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--C--CEEEEEeCCCCCCceEEEeCCCCc-EEE
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--N--QKIYCIGGLGDTHSWDVYDPRTNN-WKL 194 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~gG~~~~~~v~~yd~~t~~-W~~ 194 (352)
+.+++.|+. ...+.+||..+++|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+.. +..
T Consensus 67 g~~l~s~s~------D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d--~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 67 GTILASCSY------DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD--GKVSVVEFKENGTTSP 138 (297)
T ss_dssp CSEEEEEET------TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--SEEEEEEBCSSSCBCC
T ss_pred CCEEEEEcC------CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC--CcEEEEEecCCCceee
Confidence 456666654 34678889888776544322211111112222 2 4566666655 677888887652 211
Q ss_pred ecCCCCcccceeEEEE---------------CCEEEEEccCCCCCCceEEEEEeCC--CCceeecCCCCCCCCCCcEEEE
Q 045821 195 HTEPNIFTEIEDSFVM---------------DGKIYIRCSASAATSHVCALVYEPS--TDSWLHADANMASGWRGPAVVV 257 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~---------------~g~iyv~GG~~~~~~~~~i~~yd~~--~~~W~~~~~~~~~~~~~~~~~~ 257 (352)
.. ..........+.+ ++++++.|+.++ .+..||.. ...|..+.....+...-..+.+
T Consensus 139 ~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 139 II-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp EE-EECCSSCEEEEEECCCC------------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred ee-eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 10 0000000011111 245666665543 24455543 3335433221111111112222
Q ss_pred --C---CEEEEEecCCCCeEEEEeCCCC--ceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcC-Cccccc
Q 045821 258 --D---DALYVLDQSSGTKLMMWQKESR--EWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVG-NIGNIG 327 (352)
Q Consensus 258 --~---~~l~~~gg~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~-~~~w~~ 327 (352)
+ +.+++.|+.++ .+.+||..+. .|...............++. ..++++++.|+.+ .+.+++.. ...|+.
T Consensus 213 sp~~~~~~~las~s~D~-~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~ 291 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDR-TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 291 (297)
T ss_dssp CCCCSSSEEEEEEETTS-CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred CCCCCCceEEEEEECCC-cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEe
Confidence 2 46777777666 8888887763 35432111011111111222 2356666666555 46678876 334643
No 147
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.21 E-value=0.44 Score=41.09 Aligned_cols=186 Identities=6% Similarity=-0.031 Sum_probs=89.4
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCcceeee-----eEEECCEEEEEeCCCCCCceEEEeCCCCc-
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTARCYFP-----CGVLNQKIYCIGGLGDTHSWDVYDPRTNN- 191 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~r~~~~-----~~~~~~~iyv~gG~~~~~~v~~yd~~t~~- 191 (352)
+.+++.|+.+ ..+.+||..+.+ ...+.....+-.... +..-++..++.|+.+ ..+.+||..+..
T Consensus 80 ~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d--~~i~vwd~~~~~~ 151 (357)
T 3i2n_A 80 QRYLATGDFG------GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD--GTVKVWDPRQKDD 151 (357)
T ss_dssp TCCEEEEETT------SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT--SCEEEECTTSCSS
T ss_pred CceEEEecCC------CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC--CeEEEEeCCCCCC
Confidence 3566666543 457788887664 222221111111110 011245566666655 678899998764
Q ss_pred -EEEecCCCCc-ccceeEEE------ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE-----C
Q 045821 192 -WKLHTEPNIF-TEIEDSFV------MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV-----D 258 (352)
Q Consensus 192 -W~~~~~~~~~-~~~~~~~~------~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-----~ 258 (352)
...+...... ......+. -++.+++.|+.++ .+..||..+.+-..... .. .....+.+ +
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~-~~--~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 152 PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG-----DIKLFDLRNMALRWETN-IK--NGVCSLEFDRKDIS 223 (357)
T ss_dssp CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS-----EEEEEETTTTEEEEEEE-CS--SCEEEEEESCSSSS
T ss_pred cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC-----eEEEEECccCceeeecC-CC--CceEEEEcCCCCCC
Confidence 3333322211 11111122 3677777765442 58888987765432211 11 11112222 5
Q ss_pred CEEEEEecCCCCeEEEEeCCCCceEEccCCC----CCcCCCCceEEE-eCCE-EEEEcCCc-eEEEEEcCCcc
Q 045821 259 DALYVLDQSSGTKLMMWQKESREWSPVGRLS----TLLTRPPCKLVA-IGKT-IFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 259 ~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~----~~~~~~~~~~~~-~~~~-i~v~gG~~-~~~~~d~~~~~ 324 (352)
+..++.|+.++ .+.+||..+..- +..++ ........++.. .++. +++.|+.+ .+.+||+....
T Consensus 224 ~~~l~~~~~dg-~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 224 MNKLVATSLEG-KFHVFDMRTQHP--TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp CCEEEEEESTT-EEEEEEEEEEET--TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CCEEEEECCCC-eEEEEeCcCCCc--ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 67777777666 899998765321 11110 000111122322 2445 66666655 45578887543
No 148
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.20 E-value=0.67 Score=41.72 Aligned_cols=230 Identities=12% Similarity=0.104 Sum_probs=116.4
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT 147 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~ 147 (352)
++.||+... ....+..+|+ .++....+..... .+. .+...-++.+|+..... ...++.+|+.++.
T Consensus 141 ~g~lyv~d~----~~~~I~~id~--~~g~~~~~~~~~~--~~~--ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 141 NNTVLAYQR----DDPRVRLISV--DDNKVTTVHPGFK--GGK--PAVTKDKQRVYSIGWEG-----THTVYVYMKASGW 205 (409)
T ss_dssp TTEEEEEET----TTTEEEEEET--TTTEEEEEEETCC--BCB--CEECTTSSEEEEEBSST-----TCEEEEEEGGGTT
T ss_pred CCCEEEEec----CCCcEEEEEC--CCCEEEEeeccCC--CCc--eeEecCCCcEEEEecCC-----CceEEEEEcCCCc
Confidence 567887743 2235677788 7776665544321 111 22222244677664311 1278999987653
Q ss_pred -eEecCCCC--CcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEec---CCCCcccc--eeEEEE--CCEEE
Q 045821 148 -WTDAAPMS--TARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT---EPNIFTEI--EDSFVM--DGKIY 215 (352)
Q Consensus 148 -W~~~~~~~--~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~---~~~~~~~~--~~~~~~--~g~iy 215 (352)
...+.... .....+.+++. ++.||+... ...+++||+.+..-..+. ........ ...++. ++.||
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 22331111 11222333433 588999443 267999999988755541 11111111 134443 58999
Q ss_pred EEccCCCCCCceEEEEEeCCCCceeecCCCCC----------CCCCCc-EEE--ECCEEEEEecCCCCeEEEEeCCCCce
Q 045821 216 IRCSASAATSHVCALVYEPSTDSWLHADANMA----------SGWRGP-AVV--VDDALYVLDQSSGTKLMMWQKESREW 282 (352)
Q Consensus 216 v~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~----------~~~~~~-~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W 282 (352)
+..... ..|++||.....-........ .....+ .+. -++.||+.....+..|.++|+.++..
T Consensus 283 v~d~~~-----~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 283 MSDQNL-----SSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EEETTT-----TEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEeCCC-----CEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 984222 368888876542222111100 001112 233 35778888751334999999777776
Q ss_pred EEccCCCCC-----------cCCCCceEEEe-CCEEEEEcC-CceEEEEEc
Q 045821 283 SPVGRLSTL-----------LTRPPCKLVAI-GKTIFVIGK-GCSAVVIDV 320 (352)
Q Consensus 283 ~~~~~~~~~-----------~~~~~~~~~~~-~~~i~v~gG-~~~~~~~d~ 320 (352)
..+...+.. ....-.+++.- ++.|||... ...+..+++
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 665432110 01112234433 478888753 334444554
No 149
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.20 E-value=0.33 Score=41.76 Aligned_cols=182 Identities=9% Similarity=0.044 Sum_probs=87.1
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeE-ecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWT-DAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~-~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++..++.|+. ...+.+||..+++-. .+.....+ . .+++.. ++.+++.|+.+ ..+.+||.....-..+.
T Consensus 76 dg~~l~s~s~------D~~v~~wd~~~~~~~~~~~~h~~~-v-~~~~~~~~~~~l~s~s~D--~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 76 DGAYALSASW------DKTLRLWDVATGETYQRFVGHKSD-V-MSVDIDKKASMIISGSRD--KTIKVWTIKGQCLATLL 145 (319)
T ss_dssp TSSEEEEEET------TSEEEEEETTTTEEEEEEECCSSC-E-EEEEECTTSCEEEEEETT--SCEEEEETTSCEEEEEC
T ss_pred CCCEEEEEeC------CCEEEEEECCCCCeeEEEccCCCc-E-EEEEEcCCCCEEEEEeCC--CeEEEEECCCCeEEEEe
Confidence 4555556653 356888999887632 22211111 1 111111 45667777765 67888888765433332
Q ss_pred CCCCcccceeEEEE-------CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC
Q 045821 197 EPNIFTEIEDSFVM-------DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG 269 (352)
Q Consensus 197 ~~~~~~~~~~~~~~-------~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~ 269 (352)
... ......... ++.+++.|+.++ .+..||..+.+-...-..........++..++++++.|+.++
T Consensus 146 ~h~--~~v~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg 218 (319)
T 3frx_A 146 GHN--DWVSQVRVVPNEKADDDSVTIISAGNDK-----MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDG 218 (319)
T ss_dssp CCS--SCEEEEEECCC------CCEEEEEETTS-----CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred ccC--CcEEEEEEccCCCCCCCccEEEEEeCCC-----EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 111 011111111 233555555442 477778766543221110000000111223677777887766
Q ss_pred CeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCceEEEEEcCC
Q 045821 270 TKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 270 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~d~~~ 322 (352)
.+.+||..+.+-...-.... ...++. ..++.+++.+......+|+.+.
T Consensus 219 -~i~iwd~~~~~~~~~~~~~~----~v~~~~~sp~~~~la~~~~~~i~v~~~~~ 267 (319)
T 3frx_A 219 -EIMLWNLAAKKAMYTLSAQD----EVFSLAFSPNRYWLAAATATGIKVFSLDP 267 (319)
T ss_dssp -EEEEEETTTTEEEEEEECCS----CEEEEEECSSSSEEEEEETTEEEEEEETT
T ss_pred -eEEEEECCCCcEEEEecCCC----cEEEEEEcCCCCEEEEEcCCCcEEEEeCc
Confidence 89999998765322211111 111222 2345555555555566677654
No 150
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.18 E-value=0.08 Score=46.56 Aligned_cols=174 Identities=11% Similarity=0.068 Sum_probs=83.1
Q ss_pred CeEEEEECCCCeeEecCCCC-Ccce--eeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccce-eEEE-
Q 045821 136 SEVYCYDASMNTWTDAAPMS-TARC--YFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIE-DSFV- 209 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~~~~~~-~~r~--~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~-~~~~- 209 (352)
..+.+||..+++-....... ..+. -.+++.. +++..+.|+.+ ..+.++|..+++-... +....... ....
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d--~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD--ICIKVWDLAQQVVLSS--YRAHAAQVTCVAAS 178 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEEE--ECCCSSCEEEEEEC
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC--CeEEEEECCCCcEEEE--EcCcCCceEEEEec
Confidence 46888898876522111100 0111 1122222 56777777765 6789999998754322 11111111 1222
Q ss_pred ECC-EEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCCCCCCCcEEEE---CCEEEEEecCCCCeEEEEeCCCCceEE
Q 045821 210 MDG-KIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMASGWRGPAVVV---DDALYVLDQSSGTKLMMWQKESREWSP 284 (352)
Q Consensus 210 ~~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~---~~~l~~~gg~~~~~v~~yd~~~~~W~~ 284 (352)
.++ .+++.|+.++ .+..||..+.+-.. +... ........+.. ++++++.|+.++ .|.+||..+++-
T Consensus 179 ~~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~l~sg~~dg-~v~~wd~~~~~~-- 249 (344)
T 4gqb_B 179 PHKDSVFLSCSEDN-----RILLWDTRCPKPASQIGCS-APGYLPTSLAWHPQQSEVFVFGDENG-TVSLVDTKSTSC-- 249 (344)
T ss_dssp SSCTTEEEEEETTS-----CEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETTS-EEEEEESCC--C--
T ss_pred CCCCCceeeecccc-----ccccccccccceeeeeecc-eeeccceeeeecCCCCcceEEeccCC-cEEEEECCCCcE--
Confidence 233 5777766553 47788887765432 2211 11111112222 556777787766 899999986542
Q ss_pred ccCCCCCcCCCCceEEE-eC-CEEEEEcCCce-EEEEEcCCc
Q 045821 285 VGRLSTLLTRPPCKLVA-IG-KTIFVIGKGCS-AVVIDVGNI 323 (352)
Q Consensus 285 ~~~~~~~~~~~~~~~~~-~~-~~i~v~gG~~~-~~~~d~~~~ 323 (352)
+..+.. ....-.+++. .+ .++++-|+.+. +.++|....
T Consensus 250 ~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 250 VLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp CEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred EEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 111111 0111112222 13 35555555543 557887654
No 151
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.18 E-value=0.00071 Score=57.45 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=37.7
Q ss_pred ccCCCcHHHHHHhhccCccccchhhhhhhhhhcccccChhh
Q 045821 17 LISGLPDDIALFCLARVPRRYHAVLKCVSSRWRGLLHSEEW 57 (352)
Q Consensus 17 ~~~~lp~dl~~~il~r~p~~~~~~l~~v~k~W~~l~~s~~~ 57 (352)
.+..||.|++..||+.|++++++++..|||.|+.+...+.+
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~L 44 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPIL 44 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchH
Confidence 46679999999999999999999999999999999888865
No 152
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.17 E-value=1 Score=43.50 Aligned_cols=118 Identities=16% Similarity=0.149 Sum_probs=72.5
Q ss_pred EEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCc--------ceeeeeEEECCEEEEEeCCCCCCceEE
Q 045821 115 FEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTA--------RCYFPCGVLNQKIYCIGGLGDTHSWDV 184 (352)
Q Consensus 115 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~gG~~~~~~v~~ 184 (352)
-++.++.||+... ...++.+|..|++ |+.-...+.. ......++.+++||+.... ..+..
T Consensus 62 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~l~a 131 (668)
T 1kv9_A 62 PLFHDGVIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD---GRLIA 131 (668)
T ss_dssp CEEETTEEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT---SEEEE
T ss_pred CEEECCEEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC---CEEEE
Confidence 3567999999854 3578999998876 8765433211 0122355678899886532 67899
Q ss_pred EeCCCCc--EEEecCCCC-c-ccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc--eeec
Q 045821 185 YDPRTNN--WKLHTEPNI-F-TEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHA 242 (352)
Q Consensus 185 yd~~t~~--W~~~~~~~~-~-~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~ 242 (352)
+|..|++ |+.-...+. . ......++.++.+|+..+.........+..||..+++ |+.-
T Consensus 132 lD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 132 LDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 9998875 876432111 1 1112335678998885332221223379999998765 8753
No 153
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.47 Score=41.03 Aligned_cols=190 Identities=9% Similarity=0.063 Sum_probs=87.0
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCC--CeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASM--NTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKL 194 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t--~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~ 194 (352)
++..++.|+.+ ..+.+||... ..+..+..+......-..+.+ ++.+++.|+.+ ..+.+||..+..|+.
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D--~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD--DTVRIWKDYDDDWEC 189 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT--SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC--CeEEEEECCCCCeeE
Confidence 45566666543 4577888742 233333222111111112222 46667777765 678888888777765
Q ss_pred ecCCCCcccceeEEEE--C--CEEEEEccCCCCCCceEEEEEeCC------CCceeecCCCCC-CCCCCcEEEE-CCEEE
Q 045821 195 HTEPNIFTEIEDSFVM--D--GKIYIRCSASAATSHVCALVYEPS------TDSWLHADANMA-SGWRGPAVVV-DDALY 262 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~--~--g~iyv~GG~~~~~~~~~i~~yd~~------~~~W~~~~~~~~-~~~~~~~~~~-~~~l~ 262 (352)
+..+.........+.+ + +...+.|+.++ .+..||.. ...|........ +...-..+.. .+.++
T Consensus 190 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l 264 (330)
T 2hes_X 190 VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLI 264 (330)
T ss_dssp EEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCE
T ss_pred EEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEE
Confidence 5433221111112222 2 34555555442 23334332 223443322111 1111111222 34456
Q ss_pred EEecCCCCeEEEEeCCCCceEEccCCCCCcCC-CCceEEE--e-CCEEEEEcCCce-EEEEEcCC
Q 045821 263 VLDQSSGTKLMMWQKESREWSPVGRLSTLLTR-PPCKLVA--I-GKTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 263 ~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~--~-~~~i~v~gG~~~-~~~~d~~~ 322 (352)
+.++.++ .+.+||..++.|..+......... ...++.. . ++++++-|+.+. +.++|+++
T Consensus 265 ~s~~~dg-~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 265 ASVGADG-VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEETTS-CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEeCCC-EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 6666665 899999988888665432111111 1112221 1 456777777665 44777654
No 154
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.11 E-value=0.57 Score=41.26 Aligned_cols=191 Identities=4% Similarity=-0.071 Sum_probs=90.9
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCe-------eEecCCCCCcceeeeeEEEC----C---EEEEEeCCCCCCceE
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNT-------WTDAAPMSTARCYFPCGVLN----Q---KIYCIGGLGDTHSWD 183 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-------W~~~~~~~~~r~~~~~~~~~----~---~iyv~gG~~~~~~v~ 183 (352)
+...+++.|+. ...+.+||..+.+ -..+.....+. ......-+ + ..++.|+.+ ..+.
T Consensus 24 ~~~~~l~s~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~g~~~~~l~s~~~d--g~i~ 94 (397)
T 1sq9_A 24 ACNSFTVSCSG------DGYLKVWDNKLLDNENPKDKSYSHFVHKSGL-HHVDVLQAIERDAFELCLVATTSFS--GDLL 94 (397)
T ss_dssp ECSSEEEEEET------TSEEEEEESBCCTTCCGGGGEEEEECCTTCE-EEEEEEEEEETTTEEEEEEEEEETT--SCEE
T ss_pred ecCCeEEEEcC------CCEEEEEECCCcccccCCCcceEEecCCCcE-EEEEEecccccCCccccEEEEEcCC--CCEE
Confidence 34455556653 2467888887765 22222111111 11111224 6 777777765 6788
Q ss_pred EEeCCCCc------EEEecCCCC----cccceeEEE----ECCEE-EEEccCCCCCCceEEEEEeCCC------Cc---e
Q 045821 184 VYDPRTNN------WKLHTEPNI----FTEIEDSFV----MDGKI-YIRCSASAATSHVCALVYEPST------DS---W 239 (352)
Q Consensus 184 ~yd~~t~~------W~~~~~~~~----~~~~~~~~~----~~g~i-yv~GG~~~~~~~~~i~~yd~~~------~~---W 239 (352)
+||..+.. +..+..... ......... -++.. ++.|+.++ .+..||..+ .+ |
T Consensus 95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEEEESSSSHHHHTTTCC
T ss_pred EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEeCCccccccccceeec
Confidence 89888776 666653321 112222233 35666 66665542 356666554 21 1
Q ss_pred e---ecCC----CCCCCCCCcEE--EECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCc---CCCCceEEE-eCCEE
Q 045821 240 L---HADA----NMASGWRGPAV--VVDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLL---TRPPCKLVA-IGKTI 306 (352)
Q Consensus 240 ~---~~~~----~~~~~~~~~~~--~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~---~~~~~~~~~-~~~~i 306 (352)
. .+.. ..........+ .-++ +++.|+.++ .+.+||..+.+-...-...... .....++.. .++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~ 247 (397)
T 1sq9_A 170 SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 247 (397)
T ss_dssp CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred cCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCE
Confidence 1 1100 00011111122 2356 666676655 8999999876543222110000 011122222 25566
Q ss_pred EEEcCCc----eEEEEEcCCcc
Q 045821 307 FVIGKGC----SAVVIDVGNIG 324 (352)
Q Consensus 307 ~v~gG~~----~~~~~d~~~~~ 324 (352)
++.|+.+ .+.+||+.+..
T Consensus 248 l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 248 LAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp EEEEEEETTEEEEEEEETTTCC
T ss_pred EEEEecCCCCceEEEEECCCCc
Confidence 6666654 56689987643
No 155
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.09 E-value=0.98 Score=42.67 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=71.1
Q ss_pred EEECCEEEEEeCCCCCCCCCCeEEEEEC-CCCe--eEecCCCCCc--------ceeeeeEEECCEEEEEeCCCCCCceEE
Q 045821 116 EVLGKNAYLLGGCGWSEDATSEVYCYDA-SMNT--WTDAAPMSTA--------RCYFPCGVLNQKIYCIGGLGDTHSWDV 184 (352)
Q Consensus 116 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~-~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~gG~~~~~~v~~ 184 (352)
++.++.||+.... ...++.+|. .+++ |+.-...... ......++.+++||+.... ..+..
T Consensus 59 ~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d---g~l~a 129 (571)
T 2ad6_A 59 LVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN---GHLLA 129 (571)
T ss_dssp EEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT---SEEEE
T ss_pred EEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC---CEEEE
Confidence 5669999998542 356899999 7775 8764432211 1123456678999987542 57899
Q ss_pred EeCCCC--cEEEecCCCCc--ccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc--eeec
Q 045821 185 YDPRTN--NWKLHTEPNIF--TEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHA 242 (352)
Q Consensus 185 yd~~t~--~W~~~~~~~~~--~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~ 242 (352)
+|..|+ .|+.-...... ......++.++++|+..+..+......+..||..+.+ |+.-
T Consensus 130 lD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 130 LDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 999887 48753221111 1112334578999886432111112378999987654 8643
No 156
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.08 E-value=0.066 Score=46.66 Aligned_cols=191 Identities=10% Similarity=0.078 Sum_probs=88.1
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++..++.|+.+ ..+.+||..+++-.. +.....+ . .+++.. ++..++.++.+ ..+.+||..+.+-...-
T Consensus 43 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~h~~~-v-~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 43 EGDLLFSCSKD------SSASVWYSLNGERLGTLDGHTGT-I-WSIDVDCFTKYCVTGSAD--YSIKLWDVSNGQCVATW 112 (369)
T ss_dssp TSCEEEEEESS------SCEEEEETTTCCEEEEECCCSSC-E-EEEEECTTSSEEEEEETT--TEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEeCCCchhhhhhhhcCCc-E-EEEEEcCCCCEEEEEeCC--CeEEEEECCCCcEEEEe
Confidence 34455555432 357888887765322 2211111 1 112222 45666666654 67899999887654432
Q ss_pred CCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc----eeecCCCC-----CCCC--CCcEE--EECCEEEE
Q 045821 197 EPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS----WLHADANM-----ASGW--RGPAV--VVDDALYV 263 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~----W~~~~~~~-----~~~~--~~~~~--~~~~~l~~ 263 (352)
.. ..........-+++.++.++.........+..||..+.. +....... .... ....+ ..+++.++
T Consensus 113 ~~-~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (369)
T 3zwl_B 113 KS-PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYII 191 (369)
T ss_dssp EC-SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred ec-CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence 21 111111222235666665444311122246666654332 21111100 0000 11112 23566777
Q ss_pred EecCCCCeEEEEeCCC-CceE-EccCCCCCcCCCCceEEE-eCCEEEEEcCCc-eEEEEEcCCccc
Q 045821 264 LDQSSGTKLMMWQKES-REWS-PVGRLSTLLTRPPCKLVA-IGKTIFVIGKGC-SAVVIDVGNIGN 325 (352)
Q Consensus 264 ~gg~~~~~v~~yd~~~-~~W~-~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~-~~~~~d~~~~~w 325 (352)
+|+.++ .+.+||..+ ..-. .+.... ....++.. .++..++.++.+ .+.+||..+...
T Consensus 192 ~~~~dg-~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 192 AGHKDG-KISKYDVSNNYEYVDSIDLHE----KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp EEETTS-EEEEEETTTTTEEEEEEECCS----SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEcCCC-EEEEEECCCCcEeEEEEecCC----CceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 777666 899999987 3322 222111 11112222 245555555444 466788876543
No 157
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.07 E-value=0.15 Score=43.43 Aligned_cols=188 Identities=7% Similarity=0.019 Sum_probs=87.6
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCc-ceeeeeEEE---CCEEEEEeCCCCCCceEEEeCCCCcEEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTA-RCYFPCGVL---NQKIYCIGGLGDTHSWDVYDPRTNNWKL 194 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~-r~~~~~~~~---~~~iyv~gG~~~~~~v~~yd~~t~~W~~ 194 (352)
++..++.|+.+ ..+.+||..+.+.+.+..+..- ..-.+++.. ++.+++.|+.+ ..+.++|..+..|..
T Consensus 20 ~g~~las~s~D------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D--~~v~iWd~~~~~~~~ 91 (297)
T 2pm7_B 20 YGKRMATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--GKVMIWKEENGRWSQ 91 (297)
T ss_dssp TSSEEEEEETT------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT--TEEEEEEBSSSCBCC
T ss_pred CCCEEEEEeCC------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC--CEEEEEEcCCCceEE
Confidence 45556666543 3477778765433222222110 011112221 25667777765 678899998887755
Q ss_pred ecCCCCcccceeEEEE--C--CEEEEEccCCCCCCceEEEEEeCCCC-ceeecCCCCCCCCCCcEEEE------------
Q 045821 195 HTEPNIFTEIEDSFVM--D--GKIYIRCSASAATSHVCALVYEPSTD-SWLHADANMASGWRGPAVVV------------ 257 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~--~--g~iyv~GG~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~------------ 257 (352)
+............+.+ + +.+++.|+.++ .+..||..+. .+..... ..+......+..
T Consensus 92 ~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 92 IAVHAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSSSCBCCEEE-ECCSSCEEEEEECCCC--------
T ss_pred EEEeecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCCCceeeeee-ecccCccceEeecCCcccccccCC
Confidence 4322211111122222 2 55666655442 4667776554 2211100 000000001111
Q ss_pred ---CCEEEEEecCCCCeEEEEeCCCCc--eEEccCCCCCcCCCCceEEE-eC---CEEEEEcCCce-EEEEEcCC
Q 045821 258 ---DDALYVLDQSSGTKLMMWQKESRE--WSPVGRLSTLLTRPPCKLVA-IG---KTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 258 ---~~~l~~~gg~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~-~~---~~i~v~gG~~~-~~~~d~~~ 322 (352)
++++++.|+.++ .+.+||..+.. +..+..+..- ...-.++.. .+ +.+++.|+.+. +.++|++.
T Consensus 166 ~~~~~~~l~sgs~D~-~v~lwd~~~~~~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 166 GTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ----CCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred CCCCcceEEEEcCCC-cEEEEEEcCCCceEEEEEEecCC-CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 245677777766 78888876543 5444333221 111112222 12 36666666554 55788765
No 158
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=96.06 E-value=0.84 Score=41.68 Aligned_cols=136 Identities=14% Similarity=0.151 Sum_probs=81.5
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee------
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL------ 240 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~------ 240 (352)
++++|++.| +..+.||..+++...- ..+......++...+|++|++-|.. .++||..+.+-.
T Consensus 158 ~~~~yfFkG----~~yw~yd~~~~~~~~~-~w~gi~~iDAA~~~~g~~YfFkG~~-------y~rfd~~~~~v~~gyPk~ 225 (460)
T 1qhu_A 158 DEGILFFQG----NRKWFWDLTTGTKKER-SWPAVGNCTSALRWLGRYYCFQGNQ-------FLRFNPVSGEVPPGYPLD 225 (460)
T ss_dssp SSEEEEEET----TEEEEEETTTTEEEEE-CCTTSCCCSEEEEETTEEEEEETTE-------EEEECTTTCCCCTTCCEE
T ss_pred CCeEEEEec----ccEEEEecccceeecc-cCCCCCccchheeeCCceEEEECCE-------EEEEcCccCcccCCCCcc
Confidence 678899998 7789999988765432 1221112345666789999996654 788887654322
Q ss_pred ------ecCCC-----------------CCC-CCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceE--Ecc----CC
Q 045821 241 ------HADAN-----------------MAS-GWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWS--PVG----RL 288 (352)
Q Consensus 241 ------~~~~~-----------------~~~-~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~--~~~----~~ 288 (352)
-++.. .+. ....-+++ .+|++|++-|. ..|++|...+.+. .+. .+
T Consensus 226 is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~---~yWR~~~~~~~~~p~~Is~~Wpgl 302 (460)
T 1qhu_A 226 VRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS---HYWRLDTNRDGWHSWPIAHQWPQG 302 (460)
T ss_dssp HHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT---EEEECTTGGGCCCCEEGGGTCTTS
T ss_pred hhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC---EEEEEecCCCCcCccchhhhccCC
Confidence 11100 000 11122343 46899999886 7899987654332 121 22
Q ss_pred CCCcCCCCceEEEeCCEEEEEcCCceEEEEEcCC
Q 045821 289 STLLTRPPCKLVAIGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 289 ~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~d~~~ 322 (352)
|. .--++...++++|+|-|. ..+.|+..+
T Consensus 303 P~----~IDAAf~~~~~~yfFkG~-~yw~f~~~~ 331 (460)
T 1qhu_A 303 PS----TVDAAFSWEDKLYLIQDT-KVYVFLTKG 331 (460)
T ss_dssp CS----SCSEEEEETTEEEEEETT-EEEEEECSB
T ss_pred CC----CCcEEEEECCeEEEEeCC-EEEEEeCCC
Confidence 32 223444557899999876 577788764
No 159
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.06 E-value=0.73 Score=40.95 Aligned_cols=147 Identities=10% Similarity=0.002 Sum_probs=74.2
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-ECCE-EEEEccCCCCCCceEEEEEeCCCCce--eec
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDGK-IYIRCSASAATSHVCALVYEPSTDSW--LHA 242 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g~-iyv~GG~~~~~~~~~i~~yd~~~~~W--~~~ 242 (352)
+++.++.|+.+ ..+.+||..+..-..............++. -++. +++.|+.++ .+..||..+.+- ..+
T Consensus 258 ~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg-----~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 258 YGKYVIAGHVS--GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG-----MLAQWDLRSPECPVGEF 330 (420)
T ss_dssp TTEEEEEEETT--SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCTTSCSEEE
T ss_pred CCCEEEEEcCC--CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC-----eEEEEEcCCCcCchhhh
Confidence 56677777655 678999998875322211111111112222 2454 666665542 588889876532 222
Q ss_pred CCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCc-eEEccCCCCC-----c--CCCCceEEEeCC---EEEEEcC
Q 045821 243 DANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESRE-WSPVGRLSTL-----L--TRPPCKLVAIGK---TIFVIGK 311 (352)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~-W~~~~~~~~~-----~--~~~~~~~~~~~~---~i~v~gG 311 (352)
..... .........++++++.++.++ .+.+||..+.. -..+...... . .....+...-+. .|+..|.
T Consensus 331 ~~~~~-~~v~~~~~~~~~~l~s~~~d~-~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 331 LINEG-TPINNVYFAAGALFVSSGFDT-SIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp EESTT-SCEEEEEEETTEEEEEETTTE-EEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred hccCC-CCceEEEeCCCCEEEEecCCc-cEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence 11111 111112345788888887766 88899876521 0000000000 0 011112222233 5888887
Q ss_pred CceEEEEEcCC
Q 045821 312 GCSAVVIDVGN 322 (352)
Q Consensus 312 ~~~~~~~d~~~ 322 (352)
...+.+|+++.
T Consensus 409 ~g~~~~~~~~~ 419 (420)
T 3vl1_A 409 NNFCALYNLSN 419 (420)
T ss_dssp TTEEEEEESCC
T ss_pred CceEEEEeccC
Confidence 77777888764
No 160
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.06 E-value=0.6 Score=39.95 Aligned_cols=145 Identities=10% Similarity=0.034 Sum_probs=69.3
Q ss_pred EEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCC
Q 045821 169 KIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMAS 248 (352)
Q Consensus 169 ~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~ 248 (352)
.+++.++.+ ..+.+||..+.+....-......-...+..-++++++.|+.++ .+..||..+.+-...-. ..
T Consensus 186 ~~~~s~~~d--~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~~~~~~~~~~~--~~ 256 (340)
T 4aow_A 186 PIIVSCGWD--KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG-----QAMLWDLNEGKHLYTLD--GG 256 (340)
T ss_dssp CEEEEEETT--SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTTEEEEEEE--CS
T ss_pred cEEEEEcCC--CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEeccCceeeeec--CC
Confidence 455666554 6788999988765433211111111111222677777766553 57778887654322111 00
Q ss_pred CCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEc-cCCC-C-Cc---CCCCceEE-EeCCEEEEEcCCce-EEEEEc
Q 045821 249 GWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPV-GRLS-T-LL---TRPPCKLV-AIGKTIFVIGKGCS-AVVIDV 320 (352)
Q Consensus 249 ~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~-~~~~-~-~~---~~~~~~~~-~~~~~i~v~gG~~~-~~~~d~ 320 (352)
..........+..++.++.++ .+.+||.++..-... .... . .. ...-.+++ ..+++.++.|+.+. +.++|+
T Consensus 257 ~~v~~~~~~~~~~~~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 257 DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp SCEEEEEECSSSSEEEEEETT-EEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ceEEeeecCCCCceeeccCCC-EEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 001111222333444555544 899999887654322 1110 0 00 01111222 23566666676654 557888
Q ss_pred CCc
Q 045821 321 GNI 323 (352)
Q Consensus 321 ~~~ 323 (352)
++.
T Consensus 336 ~tG 338 (340)
T 4aow_A 336 TIG 338 (340)
T ss_dssp EC-
T ss_pred CCc
Confidence 764
No 161
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.04 E-value=0.77 Score=43.06 Aligned_cols=143 Identities=12% Similarity=0.085 Sum_probs=73.6
Q ss_pred EEEEeCCCCCCceEEEeCCCCcEEEecCCCCccc---ce-eEEE-EC-CEEEEEccCCCCCCceEEEEEeCCCCceeecC
Q 045821 170 IYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTE---IE-DSFV-MD-GKIYIRCSASAATSHVCALVYEPSTDSWLHAD 243 (352)
Q Consensus 170 iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~---~~-~~~~-~~-g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~ 243 (352)
+++.|+.+ ..+.+||..+.+-... +..... .. .+.. -+ +++++.|+.++ .+..||..+.+....-
T Consensus 175 ~l~~~~~d--~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 175 RSMTVGDD--GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSGEFLKYI 245 (615)
T ss_dssp EEEEEETT--TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTCCEEEEC
T ss_pred EEEEEeCC--CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCCCEeEEe
Confidence 56666654 6788999877653322 221111 11 2222 25 67777765543 5888998776644321
Q ss_pred -CCC-CCCCCCcEEEE-CCEEEEEecCCCCeEEEEeCCCCceEEccCCC-CCcCCCCceEEE-eCCEEEEEcCCceEEEE
Q 045821 244 -ANM-ASGWRGPAVVV-DDALYVLDQSSGTKLMMWQKESREWSPVGRLS-TLLTRPPCKLVA-IGKTIFVIGKGCSAVVI 318 (352)
Q Consensus 244 -~~~-~~~~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~ 318 (352)
... .....-..+.+ ++..++.++.++ .+.+||..+.+....-..+ ........++.. .++.+++.+....+.+|
T Consensus 246 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~ 324 (615)
T 1pgu_A 246 EDDQEPVQGGIFALSWLDSQKFATVGADA-TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 324 (615)
T ss_dssp CBTTBCCCSCEEEEEESSSSEEEEEETTS-EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEE
T ss_pred cccccccCCceEEEEEcCCCEEEEEcCCC-cEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEE
Confidence 100 11111112222 777777777665 8999999877654332222 111111222222 34444444444456688
Q ss_pred EcCC
Q 045821 319 DVGN 322 (352)
Q Consensus 319 d~~~ 322 (352)
|+..
T Consensus 325 d~~~ 328 (615)
T 1pgu_A 325 ELGH 328 (615)
T ss_dssp ETTE
T ss_pred ECCC
Confidence 8776
No 162
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.04 E-value=0.7 Score=40.56 Aligned_cols=209 Identities=8% Similarity=0.056 Sum_probs=115.4
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEE--ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCC--CCCcce
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEV--LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAP--MSTARC 159 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~--~~~~r~ 159 (352)
.+..+++ .......+.... ..-.+++. .++.||+..- ....++++++.......+.. +..|
T Consensus 54 ~I~~i~~--~g~~~~~~~~~~-----~~~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~~~~~~~~~p-- 118 (349)
T 3v64_C 54 DIRQVLP--HRSEYTLLLNNL-----ENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEEVVSTGLESP-- 118 (349)
T ss_dssp CEEEECT--TSCCEEEEECSC-----SCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCSCC--
T ss_pred ceEEEeC--CCCeeEEeecCC-----CceEEEEEeccccEEEEEec------cCCceEEEecCCCCceEEEeCCCCCc--
Confidence 3566677 666665554322 11233333 3678998852 24678999988765444322 2222
Q ss_pred eeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCC
Q 045821 160 YFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPS 235 (352)
Q Consensus 160 ~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~ 235 (352)
.+.++ .++.||+.-... ..++++++....-+.+.... ...-...++. ++.||+..-.. ...|+++++.
T Consensus 119 -~glavd~~~g~ly~~d~~~--~~I~~~~~dG~~~~~l~~~~-l~~P~~iavdp~~g~ly~td~~~----~~~I~r~~~d 190 (349)
T 3v64_C 119 -GGLAVDWVHDKLYWTDSGT--SRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGN----TPRIEASSMD 190 (349)
T ss_dssp -CEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECTT-CSCEEEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred -cEEEEecCCCeEEEEcCCC--CeEEEEcCCCCceEEEEeCC-CCCcceEEEecCcCeEEEeccCC----CCEEEEEeCC
Confidence 22333 368999986543 67889998765433332111 1111233443 68999984211 2478999886
Q ss_pred CCceeecCCCCCCCC-CCcEEE-ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-CC
Q 045821 236 TDSWLHADANMASGW-RGPAVV-VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG-KG 312 (352)
Q Consensus 236 ~~~W~~~~~~~~~~~-~~~~~~-~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g-G~ 312 (352)
...-+.+... ...+ .+.++. .++.||+.....+ .|+++|++...-..+.... ...-.++++.++.||+.. +.
T Consensus 191 G~~~~~~~~~-~~~~PnGla~d~~~~~lY~aD~~~~-~I~~~~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~ 265 (349)
T 3v64_C 191 GSGRRIIADT-HLFWPNGLTIDYAGRRMYWVDAKHH-VIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHT 265 (349)
T ss_dssp SCSCEESCCS-SCSCEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTT
T ss_pred CCCcEEEEEC-CCCCcceEEEeCCCCEEEEEECCCC-EEEEEeCCCCceEEEEeCC---CCCceEEEEECCEEEEecCCC
Confidence 5443333211 0111 111222 3788999876544 8999998864433332211 123356777889999875 44
Q ss_pred ceEEEEEc
Q 045821 313 CSAVVIDV 320 (352)
Q Consensus 313 ~~~~~~d~ 320 (352)
..+..+|.
T Consensus 266 ~~V~~~~~ 273 (349)
T 3v64_C 266 KSINSANK 273 (349)
T ss_dssp TEEEEEET
T ss_pred CeEEEEEc
Confidence 45556764
No 163
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.03 E-value=0.35 Score=45.43 Aligned_cols=190 Identities=12% Similarity=0.037 Sum_probs=86.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCC------eeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCC--CceEEEeCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMN------TWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDT--HSWDVYDPR 188 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~------~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~--~~v~~yd~~ 188 (352)
++..++.|+. ...+.+||..++ ....+..+...........+ +++..+.++.+.. ..+..+|.
T Consensus 77 ~~~~l~s~~~------dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~- 149 (615)
T 1pgu_A 77 GSQYLCSGDE------SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS- 149 (615)
T ss_dssp TCCEEEEEET------TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-
T ss_pred CCCEEEEecC------CCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-
Confidence 4566666654 245778887644 22222222111111111222 4555555554322 46677773
Q ss_pred CCcEEEecCCCCcccceeEEE--ECCE-EEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCC-CCcEE--EEC-CEE
Q 045821 189 TNNWKLHTEPNIFTEIEDSFV--MDGK-IYIRCSASAATSHVCALVYEPSTDSWLHADANMASGW-RGPAV--VVD-DAL 261 (352)
Q Consensus 189 t~~W~~~~~~~~~~~~~~~~~--~~g~-iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~-~~~~~--~~~-~~l 261 (352)
..-.. .+.........+. -++. +++.|+.++ .+..||..+.+-...-....... .-..+ .-+ ++.
T Consensus 150 -~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 150 -GNSLG--EVSGHSQRINACHLKQSRPMRSMTVGDDG-----SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp -CCEEE--ECCSCSSCEEEEEECSSSSCEEEEEETTT-----EEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCE
T ss_pred -CCcce--eeecCCccEEEEEECCCCCcEEEEEeCCC-----cEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCE
Confidence 22211 1111111111222 2443 566655442 57788876654332211111100 11122 235 677
Q ss_pred EEEecCCCCeEEEEeCCCCceEEcc-CCCCCcCCCCceEEEeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 262 YVLDQSSGTKLMMWQKESREWSPVG-RLSTLLTRPPCKLVAIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 262 ~~~gg~~~~~v~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
++.|+.++ .+.+||..+.+....- ...........++...+++.++.++.+ .+.+||+.+..
T Consensus 222 l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 222 VITVGSDR-KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp EEEEETTC-CEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEEeCCC-eEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCc
Confidence 77777666 8999999876644322 100011111122222266666666554 46689987644
No 164
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.02 E-value=0.3 Score=41.62 Aligned_cols=213 Identities=8% Similarity=-0.054 Sum_probs=104.5
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMN 146 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~ 146 (352)
++.||++.. ....++.||+ .++....+. .+. .. .+++.. ++.+|+.. ...+++||+.++
T Consensus 24 ~~~l~~~d~----~~~~i~~~d~--~~~~~~~~~-~~~----~~-~~i~~~~dG~l~v~~--------~~~l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVDI----PAKKVCRWDS--FTKQVQRVT-MDA----PV-SSVALRQSGGYVATI--------GTKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEET----TTTEEEEEET--TTCCEEEEE-CSS----CE-EEEEEBTTSSEEEEE--------TTEEEEEETTTT
T ss_pred CCEEEEEEC----CCCEEEEEEC--CCCcEEEEe-CCC----ce-EEEEECCCCCEEEEE--------CCeEEEEECCCC
Confidence 567887743 2335778899 777654443 221 11 222222 55666653 247899999999
Q ss_pred eeEecCCCCC--cceeeeeEEE--CCEEEEEeCCC---------CCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CC
Q 045821 147 TWTDAAPMST--ARCYFPCGVL--NQKIYCIGGLG---------DTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DG 212 (352)
Q Consensus 147 ~W~~~~~~~~--~r~~~~~~~~--~~~iyv~gG~~---------~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g 212 (352)
+++.+..... +........+ ++++|+..-.. ....++++|+.. +...+.. ........+.. ++
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~--~~~~pngi~~spdg 160 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD--QVDISNGLDWSLDH 160 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE--EESBEEEEEECTTS
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee--ccccccceEEcCCC
Confidence 8876654321 2222222223 57887753211 114678888753 3333221 01111122222 44
Q ss_pred -EEEEEccCCCCCCceEEEEEeC--CCCceee---cCCCCCCCCC--CcEEEECCEEEEEecCCCCeEEEEeCCCCceEE
Q 045821 213 -KIYIRCSASAATSHVCALVYEP--STDSWLH---ADANMASGWR--GPAVVVDDALYVLDQSSGTKLMMWQKESREWSP 284 (352)
Q Consensus 213 -~iyv~GG~~~~~~~~~i~~yd~--~~~~W~~---~~~~~~~~~~--~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~ 284 (352)
.+|+..... ..|++||. .+..... +......... +.++..+|.||+..... ..|.+||+++++...
T Consensus 161 ~~lyv~~~~~-----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 161 KIFYYIDSLS-----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp CEEEEEEGGG-----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-TEEEEECTTTCCEEE
T ss_pred CEEEEecCCC-----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-CEEEEEcCCCceEEE
Confidence 588874322 35777764 4554321 1110000011 11222367788765333 389999999766543
Q ss_pred ccCCCCCcCCCCceEEE---eCCEEEEEcCC
Q 045821 285 VGRLSTLLTRPPCKLVA---IGKTIFVIGKG 312 (352)
Q Consensus 285 ~~~~~~~~~~~~~~~~~---~~~~i~v~gG~ 312 (352)
.-.+|.. . -.+++. -++.|||....
T Consensus 235 ~i~~p~~--~-~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 235 TVKLPVD--K-TTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEECSSS--B-EEEEEEESGGGCEEEEEEBC
T ss_pred EEECCCC--C-ceEEEEeCCCCCEEEEEcCC
Confidence 3334421 1 122222 12478887643
No 165
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.99 E-value=0.3 Score=41.58 Aligned_cols=199 Identities=10% Similarity=0.068 Sum_probs=98.6
Q ss_pred CCEEEEEeCCCC-CCCCCCeEEEEECCCCeeEecCCC--C-CcceeeeeEEE-C-CEEEEEeCCCCCCceEEEeCCCCcE
Q 045821 119 GKNAYLLGGCGW-SEDATSEVYCYDASMNTWTDAAPM--S-TARCYFPCGVL-N-QKIYCIGGLGDTHSWDVYDPRTNNW 192 (352)
Q Consensus 119 ~~~iyv~GG~~~-~~~~~~~~~~~d~~t~~W~~~~~~--~-~~r~~~~~~~~-~-~~iyv~gG~~~~~~v~~yd~~t~~W 192 (352)
++.+|+...... .......+++||+.++++..+... . ....-..++.. + +++|+.... ..+.+||+. ++.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~---~~l~~~d~~-g~~ 103 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR---LGLLVVQTD-GTF 103 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT---TEEEEEETT-SCE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC---CCEEEEeCC-CCE
Confidence 567887721000 001135689999988887655421 0 11111223332 5 788987642 468999998 777
Q ss_pred EEe-cCCCCc--ccceeEEE--ECCEEEEEccCC----------CCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE-
Q 045821 193 KLH-TEPNIF--TEIEDSFV--MDGKIYIRCSAS----------AATSHVCALVYEPSTDSWLHADANMASGWRGPAVV- 256 (352)
Q Consensus 193 ~~~-~~~~~~--~~~~~~~~--~~g~iyv~GG~~----------~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~- 256 (352)
+.+ ...... ........ -+|++|+..... .......+++||+. .+...+....... .+.++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~-~~i~~~~ 181 (314)
T 1pjx_A 104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP-NGIAVRH 181 (314)
T ss_dssp EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE-EEEEEEE
T ss_pred EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc-ceEEEec
Confidence 665 322111 11112222 368899875322 01112478999886 5554432111100 112233
Q ss_pred ---ECC-EEEEEecCCCCeEEEEeCC-CCceEEc---cCCCCCcCCCCceEEE-eCCEEEEEc-CCceEEEEEcCCcc
Q 045821 257 ---VDD-ALYVLDQSSGTKLMMWQKE-SREWSPV---GRLSTLLTRPPCKLVA-IGKTIFVIG-KGCSAVVIDVGNIG 324 (352)
Q Consensus 257 ---~~~-~l~~~gg~~~~~v~~yd~~-~~~W~~~---~~~~~~~~~~~~~~~~-~~~~i~v~g-G~~~~~~~d~~~~~ 324 (352)
-++ .||+..... ..+++||++ +++.... ..++........+++. -++.||+.. +...+..||+++..
T Consensus 182 ~~d~dg~~l~v~~~~~-~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 182 MNDGRPYQLIVAETPT-KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp CTTSCEEEEEEEETTT-TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred ccCCCCCEEEEEECCC-CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc
Confidence 345 466655433 389999976 4443221 1222110011122332 357788874 44467788887433
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.98 E-value=0.61 Score=40.97 Aligned_cols=192 Identities=8% Similarity=-0.014 Sum_probs=97.6
Q ss_pred eeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCE-EEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCccee
Q 045821 83 VCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKN-AYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCY 160 (352)
Q Consensus 83 ~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~ 160 (352)
..++.+|. .++....+.... .......... ++. |++... .........++.+|..++++..+.. ..+...
T Consensus 168 ~~l~~~d~--~~g~~~~~~~~~----~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~ 239 (396)
T 3c5m_A 168 CRLIKVDI--ETGELEVIHQDT----AWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGES 239 (396)
T ss_dssp EEEEEEET--TTCCEEEEEEES----SCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEE
T ss_pred ceEEEEEC--CCCcEEeeccCC----cccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCcc
Confidence 45778888 777776665322 1111222222 243 444432 1111223679999998887777654 221111
Q ss_pred eeeEEE--CCE-EEEEeCCCCCCc--eEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCC-----------C
Q 045821 161 FPCGVL--NQK-IYCIGGLGDTHS--WDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASA-----------A 223 (352)
Q Consensus 161 ~~~~~~--~~~-iyv~gG~~~~~~--v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~-----------~ 223 (352)
.....+ +++ |++......... ++++|..+++.+.+...+.. . .+..- +|+++++.+... .
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC--S-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE--E-EEEECSSSSEEEEEECCC----------CC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC--C-CCccCCCCceEEEecCCcceeecccccccc
Confidence 111222 444 444432222234 99999998887776543321 1 33344 777766643220 1
Q ss_pred CCceEEEEEeCCCCceeecCCCCCC----------CCCCcEEEECC-EEEEEecCCC-CeEEEEeCCCCceEEc
Q 045821 224 TSHVCALVYEPSTDSWLHADANMAS----------GWRGPAVVVDD-ALYVLDQSSG-TKLMMWQKESREWSPV 285 (352)
Q Consensus 224 ~~~~~i~~yd~~~~~W~~~~~~~~~----------~~~~~~~~~~~-~l~~~gg~~~-~~v~~yd~~~~~W~~~ 285 (352)
.....++.+|+.+++...+...... ........-++ .|++.....+ ..++.+|..++.++.+
T Consensus 317 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp CCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred CCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccc
Confidence 1234789999988776655332110 01122333344 5555544333 4788888888776654
No 167
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.98 E-value=0.7 Score=40.08 Aligned_cols=204 Identities=11% Similarity=0.150 Sum_probs=103.8
Q ss_pred CCCCeeEeccCCCcccCCcceEEEE-ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEE
Q 045821 93 TRRSWKMIHELPARTLRRKGMGFEV-LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKI 170 (352)
Q Consensus 93 ~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~i 170 (352)
...+|+.+...... +...+.+.. -++.+|+.+.. ..+++-+=.-.+|+.+.... +...+.++.. ++.+
T Consensus 107 gG~tW~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~ 176 (327)
T 2xbg_A 107 GGQSWSQIPLDPKL--PGSPRLIKALGNGSAEMITNV-------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEY 176 (327)
T ss_dssp TTSSCEECCCCTTC--SSCEEEEEEEETTEEEEEETT-------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCE
T ss_pred CCCCceECccccCC--CCCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcE
Confidence 46899998753211 111233333 46788887641 23444322345798876432 2233344433 5667
Q ss_pred EEEeCCCCCCceEEEe-CCCCcEEEecCCCCcccceeEEE-ECCEEEEEccCCCCCCceEEEEEeC-CCCceeecCCC-C
Q 045821 171 YCIGGLGDTHSWDVYD-PRTNNWKLHTEPNIFTEIEDSFV-MDGKIYIRCSASAATSHVCALVYEP-STDSWLHADAN-M 246 (352)
Q Consensus 171 yv~gG~~~~~~v~~yd-~~t~~W~~~~~~~~~~~~~~~~~-~~g~iyv~GG~~~~~~~~~i~~yd~-~~~~W~~~~~~-~ 246 (352)
+++|.. ..++.-+ ..-.+|+.+..... .....++. -++.+|+.+... .++..+. ...+|+.+..+ .
T Consensus 177 ~~~g~~---G~~~~S~d~gG~tW~~~~~~~~-~~~~~~~~~~~g~~~~~~~~G------~~~~s~~D~G~tW~~~~~~~~ 246 (327)
T 2xbg_A 177 VAVSSR---GSFYSTWEPGQTAWEPHNRTTS-RRLHNMGFTPDGRLWMIVNGG------KIAFSDPDNSENWGELLSPLR 246 (327)
T ss_dssp EEEETT---SSEEEEECTTCSSCEEEECCSS-SCEEEEEECTTSCEEEEETTT------EEEEEETTEEEEECCCBCTTS
T ss_pred EEEECC---CcEEEEeCCCCCceeECCCCCC-CccceeEECCCCCEEEEeCCc------eEEEecCCCCCeeEeccCCcc
Confidence 766632 2344433 22578999864322 22222332 367888875321 2444432 35689987643 2
Q ss_pred CCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE-eCCEEEEEcCCceEEEEE
Q 045821 247 ASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA-IGKTIFVIGKGCSAVVID 319 (352)
Q Consensus 247 ~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~d 319 (352)
........+.. ++.+|+.|+.. .+++-.-...+|+.+..... .....+.++. -++++++.|..-.++-++
T Consensus 247 ~~~~~~~~v~~~~~~~~~~~g~~g--~i~~S~DgG~tW~~~~~~~~-~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 247 RNSVGFLDLAYRTPNEVWLAGGAG--ALLCSQDGGQTWQQDVDVKK-VPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp SCCSCEEEEEESSSSCEEEEESTT--CEEEESSTTSSCEECGGGTT-SSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred cCCcceEEEEecCCCEEEEEeCCC--eEEEeCCCCcccEEcCccCC-CCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 22211122322 57888887642 46555555789998863211 0122234433 467777777543343344
No 168
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.98 E-value=1.4 Score=43.42 Aligned_cols=182 Identities=9% Similarity=0.022 Sum_probs=99.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCC----eeE-ecC-CCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMN----TWT-DAA-PMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTN 190 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~----~W~-~~~-~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~ 190 (352)
++.||+... ....++++++... ... .+. .+..| .++++ .+++||+.-... ..|+++++...
T Consensus 435 ~~~lY~sD~------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P---~GLAvD~~~~~LY~tD~~~--~~I~v~~ldG~ 503 (791)
T 3m0c_C 435 SNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSVL--GTVSVADTKGV 503 (791)
T ss_dssp TTEEEEEET------TTTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEETTT--TEEEEEETTSS
T ss_pred CCeeEEeec------cceeEEEEeccCCCCCcceeEEEecCCCCc---ceeeeeecCCcEEEEecCC--CeEEEEeCCCC
Confidence 678998853 2356777777642 222 222 22222 22333 367999986544 68899999876
Q ss_pred cEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE---ECCEEEEEe
Q 045821 191 NWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV---VDDALYVLD 265 (352)
Q Consensus 191 ~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~---~~~~l~~~g 265 (352)
.-+.+..... ..-..+++ .+|.||+.--. ....|+++++....-..+... ......+++ .+++||+..
T Consensus 504 ~~~~l~~~~l-~~P~gIaVDp~~g~LYwtD~g----~~~~I~~~~~dG~~~~~lv~~--~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 504 KRKTLFRENG-SKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SEEEEEECTT-CCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeCCC-CCcceEEEecCCCCEEEecCC----CCCeEEEEecCCCceEEEEeC--CCCCceEEEEecCCCeEEEEe
Confidence 5544431111 11123333 26899998411 113688888865443333211 001111232 368999997
Q ss_pred cCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcC-CceEEEEEc
Q 045821 266 QSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGK-GCSAVVIDV 320 (352)
Q Consensus 266 g~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG-~~~~~~~d~ 320 (352)
...+ .|+++|++...-..+..... ...+.+++++.++.||+.-. ...+..+|.
T Consensus 577 ~~~~-~I~~~d~dG~~~~~v~~~~~-~l~~P~glav~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 577 SKLH-SISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp TTTT-EEEEEETTSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCCC-cEEEEecCCCceEEEecCCC-ccCCCCEEEEeCCEEEEEECCCCEEEEEeC
Confidence 6544 89999998755444432211 12344678888999998863 344555664
No 169
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.98 E-value=0.23 Score=42.51 Aligned_cols=139 Identities=12% Similarity=0.054 Sum_probs=66.7
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECC-EEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCC-C--cc
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGK-NAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMS-T--AR 158 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~-~--~r 158 (352)
.+..+|+ .+......-..+.. ...........++ .+|+.+.. ...++++|+.+++-.. +.... . ..
T Consensus 12 ~v~~~d~--~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 12 KLVVIDT--EKMAVDKVITIADA-GPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEET--TTTEEEEEEECTTC-TTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred eEEEEEC--CCCcEEEEEEcCCC-CCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 4556688 76654333233210 0011122222244 67777642 3578999998876432 22111 0 00
Q ss_pred eeeeeEEE-CC-EEEEEeCC-------C--CCCceEEEeCCCCcEEEecCCCCcccceeEEEECCE-EEEEccCCCCCCc
Q 045821 159 CYFPCGVL-NQ-KIYCIGGL-------G--DTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGK-IYIRCSASAATSH 226 (352)
Q Consensus 159 ~~~~~~~~-~~-~iyv~gG~-------~--~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~-iyv~GG~~~~~~~ 226 (352)
....++.. ++ .+|+.... . ....+.+||..+.+....-...... ...+..-+++ ||+. +
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~-~------- 153 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI-TMLAWARDGSKLYGL-G------- 153 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC-CCEEECTTSSCEEEE-S-------
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc-ceeEECCCCCEEEEe-C-------
Confidence 11222332 34 67776411 0 1278899999887654322121111 1112222554 6665 2
Q ss_pred eEEEEEeCCCCcee
Q 045821 227 VCALVYEPSTDSWL 240 (352)
Q Consensus 227 ~~i~~yd~~~~~W~ 240 (352)
..+..+|..+.+-.
T Consensus 154 ~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 RDLHVMDPEAGTLV 167 (337)
T ss_dssp SSEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEe
Confidence 14888898776543
No 170
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.97 E-value=0.087 Score=47.06 Aligned_cols=145 Identities=14% Similarity=0.129 Sum_probs=74.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.|+.+ ..+.+||..+++-...-.-... .-.+++.. ++..++.|+.+ ..+.+||..+.+....-.
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d--~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQGHEQ-DIYSLDYFPSGDKLVSGSGD--RTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETT--SEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEccCCC-CEEEEEEcCCCCEEEEecCC--CcEEEEECCCCeeEEEEE
Confidence 45666666543 4588899988764332111111 11122222 45555666655 678899998876543321
Q ss_pred CCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCC-CCCC-Cc--EEE--ECCEEEEEecCC
Q 045821 198 PNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMA-SGWR-GP--AVV--VDDALYVLDQSS 268 (352)
Q Consensus 198 ~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~-~~~~-~~--~~~--~~~~l~~~gg~~ 268 (352)
.. .....++.. ++++++.|+.++ .+..||..+..-.. +..... ...+ .. .+. -+++.++.|+.+
T Consensus 205 ~~--~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 205 IE--DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp CS--SCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cC--CCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 11 111122222 677777776553 47788887765432 211110 0111 11 122 266777777766
Q ss_pred CCeEEEEeCCCC
Q 045821 269 GTKLMMWQKESR 280 (352)
Q Consensus 269 ~~~v~~yd~~~~ 280 (352)
+ .+.+||..+.
T Consensus 278 ~-~v~~wd~~~~ 288 (393)
T 1erj_A 278 R-SVKLWNLQNA 288 (393)
T ss_dssp S-EEEEEEC---
T ss_pred C-EEEEEECCCC
Confidence 6 8999998753
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.88 E-value=0.75 Score=43.97 Aligned_cols=181 Identities=8% Similarity=-0.041 Sum_probs=94.1
Q ss_pred CCeEEEEECCC------CeeEecC-CCCCcceeeeeEE-ECCE-EEEEeCCCC-----CCceEEEeCC-CC---cEEEec
Q 045821 135 TSEVYCYDASM------NTWTDAA-PMSTARCYFPCGV-LNQK-IYCIGGLGD-----THSWDVYDPR-TN---NWKLHT 196 (352)
Q Consensus 135 ~~~~~~~d~~t------~~W~~~~-~~~~~r~~~~~~~-~~~~-iyv~gG~~~-----~~~v~~yd~~-t~---~W~~~~ 196 (352)
..+++++|..+ ++.+.+. .-. ......+. -+|+ |++...... ...++++|.. ++ ..+.+.
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 36899999988 6666554 222 11122222 2554 444432221 1578999998 56 444443
Q ss_pred CCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCC----CCCC---CcEEE-ECCEEEEEecCC
Q 045821 197 EPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMA----SGWR---GPAVV-VDDALYVLDQSS 268 (352)
Q Consensus 197 ~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~----~~~~---~~~~~-~~~~l~~~gg~~ 268 (352)
.-........+..-+|++|+.+... ....++.+|..+.++..+..... ..+. ..... -++++++.+...
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~---~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~ 314 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRT---GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKG 314 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTT---SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSS
T ss_pred CCCCceEcceEECCCCeEEEEECCC---CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcC
Confidence 1111111111222378877775432 23479999998888887744211 1111 11222 367777776652
Q ss_pred CCeEEEEeCCCCceEEccCCCCCcCCCCceE-EEeCCEEEEEcC-Cc---eEEEEEcCCcc
Q 045821 269 GTKLMMWQKESREWSPVGRLSTLLTRPPCKL-VAIGKTIFVIGK-GC---SAVVIDVGNIG 324 (352)
Q Consensus 269 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~~i~v~gG-~~---~~~~~d~~~~~ 324 (352)
...++.+|..++....+..... ....+ ..-++.+++..+ .. .++.+|++...
T Consensus 315 ~~~l~~~d~~~~~~~~l~~~~~----~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 315 AAVLGILDPESGELVDAAGPWT----EWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SCEEEEEETTTTEEEECCSSCC----EEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ccEEEEEECCCCcEEEecCCCC----eEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 2578888998888776643211 11223 344666665543 22 24456655443
No 172
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.86 E-value=0.43 Score=40.99 Aligned_cols=145 Identities=10% Similarity=0.086 Sum_probs=70.3
Q ss_pred CCE-EEEEeCCCCCCCCCCeEEEEEC-CCCeeEecCC--CCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCc---
Q 045821 119 GKN-AYLLGGCGWSEDATSEVYCYDA-SMNTWTDAAP--MSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN--- 191 (352)
Q Consensus 119 ~~~-iyv~GG~~~~~~~~~~~~~~d~-~t~~W~~~~~--~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~--- 191 (352)
++. .++.|+.+ ..+.+||. .+++...+.. ...+-. +++...+..++.++.+ ..+.+||..+..
T Consensus 67 ~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~v~--~l~~~~~~~l~s~~~d--~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 67 NTDLQIYVGTVQ------GEILKVDLIGSPSFQALTNNEANLGIC--RICKYGDDKLIAASWD--GLIEVIDPRNYGDGV 136 (342)
T ss_dssp SSSEEEEEEETT------SCEEEECSSSSSSEEECBSCCCCSCEE--EEEEETTTEEEEEETT--SEEEEECHHHHTTBC
T ss_pred CCCcEEEEEcCC------CeEEEEEeccCCceEeccccCCCCceE--EEEeCCCCEEEEEcCC--CeEEEEccccccccc
Confidence 556 56666543 46888999 8877655544 222211 2222224455555544 678888876400
Q ss_pred ----EEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCC-Cc--eeecCCCCCCCCCCcEEEE-CCEEEE
Q 045821 192 ----WKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPST-DS--WLHADANMASGWRGPAVVV-DDALYV 263 (352)
Q Consensus 192 ----W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~-~~--W~~~~~~~~~~~~~~~~~~-~~~l~~ 263 (352)
.+.+...........+....+. ++.|+..+ .+..||..+ .. ..................- ++++++
T Consensus 137 ~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~ 210 (342)
T 1yfq_A 137 IAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNNS-----QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYA 210 (342)
T ss_dssp EEEEESCSSSSSSCCCEEEEEECSSE-EEEEESTT-----EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEE
T ss_pred ccccCCeeeEEeeCCceEEEEecCCc-EEEEeCCC-----eEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEE
Confidence 1122222211111223333445 44444332 588888876 33 2222111111111111222 567777
Q ss_pred EecCCCCeEEEEeCCCC
Q 045821 264 LDQSSGTKLMMWQKESR 280 (352)
Q Consensus 264 ~gg~~~~~v~~yd~~~~ 280 (352)
.|+..+ .+.+||....
T Consensus 211 ~~~~dg-~i~i~~~~~~ 226 (342)
T 1yfq_A 211 CSSIDG-RVAVEFFDDQ 226 (342)
T ss_dssp EEETTS-EEEEEECCTT
T ss_pred EEecCC-cEEEEEEcCC
Confidence 887766 7777766543
No 173
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.86 E-value=0.95 Score=40.58 Aligned_cols=214 Identities=10% Similarity=0.027 Sum_probs=113.8
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCCCe----eEecCCCCCc
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASMNT----WTDAAPMSTA 157 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~----W~~~~~~~~~ 157 (352)
.+..+|. ....+..+.+.. ..-.+++.. ++.||+..- ....++++++.... ...+.... .
T Consensus 93 ~I~~i~l--~~~~~~~~~~~~-----~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~~~-~ 158 (400)
T 3p5b_L 93 EVRKMTL--DRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD-I 158 (400)
T ss_dssp EEEEECT--TSCSCEEEECSC-----SCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEECSS-C
T ss_pred eeEEEcc--CCcceeEecccc-----CcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEeCC-C
Confidence 5566677 666666554322 222334443 688998853 23568888886521 22221111 1
Q ss_pred ceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEe
Q 045821 158 RCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYE 233 (352)
Q Consensus 158 r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd 233 (352)
....++++ .++.||+.-... ..++++|+....-+.+.... ...-...++ .++.||+.--. ....|++++
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~--~~I~~~~~~g~~~~~l~~~~-~~~P~~iavdp~~g~ly~td~~----~~~~I~~~~ 231 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGG 231 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTT--TEEEEECTTTCSEEEEEECS-SCCEEEEEEETTTTEEEEEECS----SSCCEEEEE
T ss_pred CCcccEEEEecCCceEEEECCC--CeEEEEeCCCCceEEEEeCC-CCCcceEEEecccCeEEEEeCC----CCCEEEEEe
Confidence 11223333 378999986544 67889999876654443111 111123333 36899987411 113588888
Q ss_pred CCCCceeec-CCCCCCCCCCcEEE-ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-
Q 045821 234 PSTDSWLHA-DANMASGWRGPAVV-VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG- 310 (352)
Q Consensus 234 ~~~~~W~~~-~~~~~~~~~~~~~~-~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g- 310 (352)
+....=+.+ ......+ .+.++. .++.||+.....+ .|+++|++...-..+...+. ...+.+++++.++.||+.-
T Consensus 232 ~dG~~~~~~~~~~l~~P-~glavd~~~~~lY~aD~~~~-~I~~~d~dG~~~~~~~~~~~-~l~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 232 LNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLH-SISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp TTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTT-EEEEEETTSCCCEEEEECSS-TTSSEEEEEEETTEEEEEES
T ss_pred CCCCccEEEEECCCCce-EEEEEEeCCCEEEEEECCCC-EEEEEeCCCCccEEEEeCCC-CCCCCEEEEEeCCEEEEecC
Confidence 764332222 2111100 111222 3688999876544 89999998755444433221 1234467788899999875
Q ss_pred CCceEEEEEcC
Q 045821 311 KGCSAVVIDVG 321 (352)
Q Consensus 311 G~~~~~~~d~~ 321 (352)
+...+..+|..
T Consensus 309 ~~~~V~~~~~~ 319 (400)
T 3p5b_L 309 INEAIFSANRL 319 (400)
T ss_dssp SSCSEEEEESS
T ss_pred CCCeEEEEEcC
Confidence 34456667743
No 174
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.84 E-value=0.087 Score=45.47 Aligned_cols=189 Identities=10% Similarity=0.069 Sum_probs=89.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcc-eeeeeEEE---CCEEEEEeCCCCCCceEEEeCCCCcEEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTAR-CYFPCGVL---NQKIYCIGGLGDTHSWDVYDPRTNNWKL 194 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r-~~~~~~~~---~~~iyv~gG~~~~~~v~~yd~~t~~W~~ 194 (352)
++..++.|+. ...+.+||..+++...+..+..-. .-.+++.. ++.+++.|+.+ ..+.+||..+..|..
T Consensus 24 ~g~~lasgs~------D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D--~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 24 YGTRLATCSS------DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD--RKVIIWREENGTWEK 95 (316)
T ss_dssp GGCEEEEEET------TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT--SCEEEECCSSSCCCE
T ss_pred CCCEEEEEeC------CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC--CEEEEEECCCCcceE
Confidence 4455555553 345777888766543322221100 11122221 25666667665 678999999887755
Q ss_pred ecCCCCcccceeEEEE--C--CEEEEEccCCCCCCceEEEEEeCCCC-ceeecCCCCCCCCCCcEEEE------------
Q 045821 195 HTEPNIFTEIEDSFVM--D--GKIYIRCSASAATSHVCALVYEPSTD-SWLHADANMASGWRGPAVVV------------ 257 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~--~--g~iyv~GG~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~------------ 257 (352)
+..+........++.+ + +.+++.|+.++ .+..+|..+. .|........+......+..
T Consensus 96 ~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp EEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred EEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence 4322211111122222 3 56666665442 3566666544 46432211111000001111
Q ss_pred -------CCEEEEEecCCCCeEEEEeCCC-CceEEccCCCCCcCCCCceEEE-eC----CEEEEEcCCce-EEEEEcCC
Q 045821 258 -------DDALYVLDQSSGTKLMMWQKES-REWSPVGRLSTLLTRPPCKLVA-IG----KTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 258 -------~~~l~~~gg~~~~~v~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~-~~----~~i~v~gG~~~-~~~~d~~~ 322 (352)
.+++++.|+.++ .+.+||..+ +.|..+..+... ...-.++.. .+ +.+++.|+.+. +.++|++.
T Consensus 171 ~~~~~~~~~~~l~sgs~D~-~v~lWd~~~~~~~~~~~~l~~h-~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDN-LIKLWKEEEDGQWKEEQKLEAH-SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCSCCCCCCCBEECCBTTS-BCCEEEECTTSCEEEEECCBCC-SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ccccCccccceEEEecCCC-eEEEEEeCCCCccceeeecccC-CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 134566676665 788888864 457666544321 111111211 12 25555565554 55788765
No 175
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.83 E-value=0.3 Score=42.02 Aligned_cols=190 Identities=11% Similarity=0.151 Sum_probs=88.8
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--C--CEEEEEeCCCCCCceEEEeCCCC-cEEE
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--N--QKIYCIGGLGDTHSWDVYDPRTN-NWKL 194 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~gG~~~~~~v~~yd~~t~-~W~~ 194 (352)
+.+++.|+.+ ..+.+||..+++|..+..+......-..+.+ + +.+++.|+.+ ..+.+||..+. .|..
T Consensus 71 ~~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D--~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 71 GNILASCSYD------RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD--GAISLLTYTGEGQWEV 142 (316)
T ss_dssp SSCEEEEETT------SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS--SCEEEEEECSSSCEEE
T ss_pred CCEEEEEECC------CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC--CCEEEEecCCCCCcce
Confidence 4566666543 4578889887766443322111111112222 2 5566777665 67788888765 5754
Q ss_pred ecCCCCcccceeEEEE-------------------CCEEEEEccCCCCCCceEEEEEeCC-CCceeecCCCCCCCCCCcE
Q 045821 195 HTEPNIFTEIEDSFVM-------------------DGKIYIRCSASAATSHVCALVYEPS-TDSWLHADANMASGWRGPA 254 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~-------------------~g~iyv~GG~~~~~~~~~i~~yd~~-~~~W~~~~~~~~~~~~~~~ 254 (352)
............++.. ++++++.|+.++ .+..+|.. ...|..+.....+...-..
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN-----LIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS-----BCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCC-----eEEEEEeCCCCccceeeecccCCCceEE
Confidence 3221111111101111 134556554442 34455554 3456554332211111112
Q ss_pred EEE--C----CEEEEEecCCCCeEEEEeCCC---CceEE--ccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcC
Q 045821 255 VVV--D----DALYVLDQSSGTKLMMWQKES---REWSP--VGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVG 321 (352)
Q Consensus 255 ~~~--~----~~l~~~gg~~~~~v~~yd~~~---~~W~~--~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~ 321 (352)
+.+ + +.+++.|+.++ .+.+||..+ +.|.. +.... ....++. ..++.+++.|+.+ .+.+++..
T Consensus 218 v~~sp~~~~~~~~las~s~D~-~v~iw~~~~~~~~~~~~~~~~~~~----~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCSQDG-RVFIWTCDDASSNTWSPKLLHKFN----DVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECCCCSSCSCCEEEEEETTC-EEEEEECSSTTCCCCBCCEEEECS----SCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEecCCCCCCCceEEEEcCCC-eEEEEEccCccccchhhhhhhcCC----CcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 222 2 25677777666 899998875 33321 11111 1111222 2355666666555 45578875
Q ss_pred -Cccccc
Q 045821 322 -NIGNIG 327 (352)
Q Consensus 322 -~~~w~~ 327 (352)
...|..
T Consensus 293 ~~g~~~~ 299 (316)
T 3bg1_A 293 VDGQWVC 299 (316)
T ss_dssp TTSCEEE
T ss_pred CCCcEEE
Confidence 334543
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.82 E-value=0.43 Score=45.67 Aligned_cols=192 Identities=8% Similarity=-0.079 Sum_probs=103.0
Q ss_pred ceeEEEecCCCCC------CCeeEec-cCCCcccCCcceEEEEECCE-EEEEeCCCCC-CCCCCeEEEEECC-CC---ee
Q 045821 82 RVCCYVLDPNSTR------RSWKMIH-ELPARTLRRKGMGFEVLGKN-AYLLGGCGWS-EDATSEVYCYDAS-MN---TW 148 (352)
Q Consensus 82 ~~~~~~~d~~~~~------~~w~~~~-~~~~~~~~~~~~~~~~~~~~-iyv~GG~~~~-~~~~~~~~~~d~~-t~---~W 148 (352)
...++.+|. .+ +....+. ... .........-+++ |+........ .-...+++++|.. ++ +.
T Consensus 160 ~~~i~~~~~--~~~~~~~~~~~~~l~~~~~----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~ 233 (662)
T 3azo_A 160 RRFLAAVPL--DGSAAADRSAVRELSDDAH----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT 233 (662)
T ss_dssp EEEEEEEET--TSTTTTCGGGSEESSCSCS----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE
T ss_pred eeEEEEEEC--CCCccccCCceeEEEecCC----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc
Confidence 356788888 66 5555554 222 1111112223454 4443322111 0123689999998 56 44
Q ss_pred EecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCccc-------ceeEEEE-CCEEEEEcc
Q 045821 149 TDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTE-------IEDSFVM-DGKIYIRCS 219 (352)
Q Consensus 149 ~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~-------~~~~~~~-~g~iyv~GG 219 (352)
..+..-.. ......+.. ++++|+.+..+....++.+|..+.+++.+........ ....+.. ++++++.+.
T Consensus 234 ~~l~~~~~-~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 234 RTLLGGPE-EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EEEEEETT-BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred EEeCCCCC-ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 44432111 111222222 6777777665433579999998888988754221110 1123333 677777643
Q ss_pred CCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcE-EEECCEEEEEecCCC--CeEEEEeCCCCceEEcc
Q 045821 220 ASAATSHVCALVYEPSTDSWLHADANMASGWRGPA-VVVDDALYVLDQSSG--TKLMMWQKESREWSPVG 286 (352)
Q Consensus 220 ~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l~~~gg~~~--~~v~~yd~~~~~W~~~~ 286 (352)
. ....++.+|..+++.+.+.... ...... ...++.+++..+... ..++.+|..+++...+.
T Consensus 313 ~----~~~~l~~~d~~~~~~~~l~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 313 K----GAAVLGILDPESGELVDAAGPW--TEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp S----SSCEEEEEETTTTEEEECCSSC--CEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred c----CccEEEEEECCCCcEEEecCCC--CeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 2 3347888898888777764321 111112 234666666654332 46888999988887774
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.79 E-value=0.16 Score=43.88 Aligned_cols=147 Identities=9% Similarity=0.070 Sum_probs=79.8
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-ECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DA 244 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~ 244 (352)
++++|+.+... ..+.+||+.+++.+.+..... ..-...+. -+|++|+..... ......+++||+.+.....+ ..
T Consensus 55 ~g~l~~~~~~~--~~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~~~~~~~ 130 (333)
T 2dg1_A 55 QGQLFLLDVFE--GNIFKINPETKEIKRPFVSHK-ANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNLQDIIED 130 (333)
T ss_dssp TSCEEEEETTT--CEEEEECTTTCCEEEEEECSS-SSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSCEEEECS
T ss_pred CCCEEEEECCC--CEEEEEeCCCCcEEEEeeCCC-CCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEEEEEEcc
Confidence 57788877543 678999999988876542111 11112222 367888874322 11223689999988776532 21
Q ss_pred CCCCCCCCcEE--EECCEEEEEecCC-----CCeEEEEeCCCCceEEccCCCCCcCCCCceEEE-eCC-EEEEEcC-Cce
Q 045821 245 NMASGWRGPAV--VVDDALYVLDQSS-----GTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA-IGK-TIFVIGK-GCS 314 (352)
Q Consensus 245 ~~~~~~~~~~~--~~~~~l~~~gg~~-----~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~-~i~v~gG-~~~ 314 (352)
.. .......+ .-++.+|+..... ...+++||+++++...+.... ....+++. .++ .||+... ...
T Consensus 131 ~~-~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~~~~~ 205 (333)
T 2dg1_A 131 LS-TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI----SVANGIALSTDEKVLWVTETTANR 205 (333)
T ss_dssp SS-SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE----SSEEEEEECTTSSEEEEEEGGGTE
T ss_pred Cc-cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC----CcccceEECCCCCEEEEEeCCCCe
Confidence 11 11111122 2367788765421 237999999887766553110 11112222 233 5777653 345
Q ss_pred EEEEEcCC
Q 045821 315 AVVIDVGN 322 (352)
Q Consensus 315 ~~~~d~~~ 322 (352)
+.+||+..
T Consensus 206 i~~~d~~~ 213 (333)
T 2dg1_A 206 LHRIALED 213 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEecC
Confidence 67788754
No 178
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.79 E-value=0.29 Score=42.31 Aligned_cols=187 Identities=10% Similarity=0.041 Sum_probs=91.8
Q ss_pred EEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-C---CEEEEEeCCCCCCceEEEeCCCCc--EEE
Q 045821 121 NAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-N---QKIYCIGGLGDTHSWDVYDPRTNN--WKL 194 (352)
Q Consensus 121 ~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~---~~iyv~gG~~~~~~v~~yd~~t~~--W~~ 194 (352)
.+++.|+... ....+.+||..+++............-.+++.. + +.+++.|+.+ ..+.+||..+.. -..
T Consensus 32 ~l~~~~s~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~ 106 (357)
T 3i2n_A 32 KFVTMGNFAR---GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG--GNLHIWNLEAPEMPVYS 106 (357)
T ss_dssp EEEEEEC--C---CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT--SCEEEECTTSCSSCSEE
T ss_pred eEEEecCccC---CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC--CeEEEEeCCCCCccEEE
Confidence 5555554311 135788889888765433222111111111111 2 4666667655 678899988764 222
Q ss_pred ecCCCCcccceeEE-------EECCEEEEEccCCCCCCceEEEEEeCCCCc--eeecCCCCCCCC-CCcEEE------EC
Q 045821 195 HTEPNIFTEIEDSF-------VMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHADANMASGW-RGPAVV------VD 258 (352)
Q Consensus 195 ~~~~~~~~~~~~~~-------~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~-~~~~~~------~~ 258 (352)
+..... .-.... .-++.+++.|+.++ .+..||..+.. ...+........ ....+. .+
T Consensus 107 ~~~~~~--~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 107 VKGHKE--IINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE 179 (357)
T ss_dssp ECCCSS--CEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C
T ss_pred EEeccc--ceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC
Confidence 221111 111111 13566666665543 47888887654 333322111111 111122 46
Q ss_pred CEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEe----CCEEEEEcCCc-eEEEEEcCCcc
Q 045821 259 DALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI----GKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 259 ~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
+.+++.|+.++ .+.+||..+.+-........ ...++... ++..++.|+.+ .+.+||+....
T Consensus 180 ~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 180 ERVVCAGYDNG-DIKLFDLRNMALRWETNIKN----GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CCEEEEEETTS-EEEEEETTTTEEEEEEECSS----CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred CCEEEEEccCC-eEEEEECccCceeeecCCCC----ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 77777777666 89999999877543322221 11222222 44555555444 45678876644
No 179
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=95.75 E-value=0.0025 Score=55.95 Aligned_cols=43 Identities=21% Similarity=0.164 Sum_probs=36.7
Q ss_pred CCCCccCCCcHHHHHHhhccCccccchhhhhhhhhhcccccCh
Q 045821 13 SVVPLISGLPDDIALFCLARVPRRYHAVLKCVSSRWRGLLHSE 55 (352)
Q Consensus 13 ~~~~~~~~lp~dl~~~il~r~p~~~~~~l~~v~k~W~~l~~s~ 55 (352)
.+...|..||+|++.+|+++++..+..+++.|||+|+.+..++
T Consensus 4 ~~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~ 46 (336)
T 2ast_B 4 FPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE 46 (336)
T ss_dssp ---CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCS
T ss_pred cccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCc
Confidence 3456789999999999999999999999999999999886544
No 180
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=95.74 E-value=0.62 Score=37.58 Aligned_cols=147 Identities=7% Similarity=-0.020 Sum_probs=82.3
Q ss_pred EEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeE--ec----CCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEE
Q 045821 114 GFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWT--DA----APMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVY 185 (352)
Q Consensus 114 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~y 185 (352)
+++...+++|+|-| ..+|+++.....+. .+ +.+|. .--++... ++++|++-| +.+++|
T Consensus 28 Ai~~~~g~~y~Fkg--------~~~wr~~~~~~~~~p~~I~~~wp~Lp~--~iDAa~~~~~~~~iyfFkG----~~~w~~ 93 (207)
T 1pex_A 28 AITSLRGETMIFKD--------RFFWRLHPQQVDAELFLTKSFWPELPN--RIDAAYEHPSHDLIFIFRG----RKFWAL 93 (207)
T ss_dssp EEEEETTEEEEEET--------TEEEEECSSSSCCEEEEHHHHCTTSCS--SCCEEEEETTTTEEEEEET----TEEEEE
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCcCCCceehhHhccCCCC--CccEEEEeccCCcEEEEcc----CEEEEE
Confidence 35567999999976 45677665433221 11 12232 11222222 589999999 778999
Q ss_pred eCCCCcE---EEecCC--CCcc-cceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCC-----CC-CCC
Q 045821 186 DPRTNNW---KLHTEP--NIFT-EIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DAN-----MA-SGW 250 (352)
Q Consensus 186 d~~t~~W---~~~~~~--~~~~-~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~-----~~-~~~ 250 (352)
+..+-.- +.|..+ |... ...+++.. +|++|++-|. ..|+||..+++-..- +.. +. +..
T Consensus 94 ~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~-------~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~ 166 (207)
T 1pex_A 94 NGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN-------QVWRYDDTNHIMDKDYPRLIEEDFPGIGDK 166 (207)
T ss_dssp STTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT-------EEEEEETTTTEECSSCCCBHHHHSTTSCSC
T ss_pred eCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC-------EEEEEeCcCccccCCCCccHHHcCCCCCCC
Confidence 7543211 233322 2111 12233333 4899999654 389999876532210 000 00 111
Q ss_pred CCcEEEECCEEEEEecCCCCeEEEEeCCCCceEE
Q 045821 251 RGPAVVVDDALYVLDQSSGTKLMMWQKESREWSP 284 (352)
Q Consensus 251 ~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~ 284 (352)
.-+++..++++|++-|. ..++||..+++-..
T Consensus 167 iDaAf~~~g~~YfFkg~---~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 167 VDAVYEKNGYIYFFNGP---IQFEYSIWSNRIVR 197 (207)
T ss_dssp CSEEEEETTEEEEEETT---EEEEEETTTTEEEE
T ss_pred ccEEEEcCCcEEEEECC---EEEEEeCCccEEec
Confidence 22345568999999876 89999998776544
No 181
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.73 E-value=0.27 Score=44.45 Aligned_cols=146 Identities=8% Similarity=0.003 Sum_probs=73.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCccee-eeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCY-FPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+++.|+.+ ..+.+||..++....+......... .+++.. ++.+++.|+.+ ..+.+||..+.. +.
T Consensus 176 ~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d--g~i~~wd~~~~~---~~ 244 (435)
T 4e54_B 176 NTNQFYASSME------GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV--GNVILLNMDGKE---LW 244 (435)
T ss_dssp CTTEEEEECSS------SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS--SBEEEEESSSCB---CC
T ss_pred CCCEEEEEeCC------CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC--CcEeeeccCcce---eE
Confidence 45566666543 3578889988766554432222121 222222 56777777765 678899987643 22
Q ss_pred CCCCcccceeEEEE--C-CEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEE--EECCEEEEEecCCCC
Q 045821 197 EPNIFTEIEDSFVM--D-GKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAV--VVDDALYVLDQSSGT 270 (352)
Q Consensus 197 ~~~~~~~~~~~~~~--~-g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~--~~~~~l~~~gg~~~~ 270 (352)
.+........++.+ + ..+++.|+.++ .+..||..+.+-... .....+...-..+ .-++..++.|+.++
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~d~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~- 318 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASVDQ-----TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS- 318 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEETTS-----BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-
T ss_pred EEecccceEEeeeecCCCceEEEEecCcc-----eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC-
Confidence 12111111122222 3 34666655542 366777765432211 0001111000011 22666777777666
Q ss_pred eEEEEeCCCCc
Q 045821 271 KLMMWQKESRE 281 (352)
Q Consensus 271 ~v~~yd~~~~~ 281 (352)
.|.+||..+..
T Consensus 319 ~i~iwd~~~~~ 329 (435)
T 4e54_B 319 EIRVYSASQWD 329 (435)
T ss_dssp CEEEEESSSSS
T ss_pred EEEEEECCCCc
Confidence 89999987643
No 182
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.73 E-value=0.44 Score=46.30 Aligned_cols=184 Identities=9% Similarity=0.020 Sum_probs=97.1
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCC----CeeEecC--CCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASM----NTWTDAA--PMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTN 190 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t----~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~ 190 (352)
++.||+.-- ....++++++.+ ..-..+- .+..| .++++ .++.||+.-... ..+.++++...
T Consensus 417 ~~~Ly~sD~------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---~glavD~~~g~LY~tD~~~--~~I~v~d~dg~ 485 (699)
T 1n7d_A 417 SNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSVL--GTVSVADTKGV 485 (699)
T ss_dssp TTEEEECCT------TTTSBEEEESCCCCC-CCCCCBCCSCC--C---CCEECCCSSSBCEECCTTT--SCEEEEBSSSC
T ss_pred cCeEEEEec------CCCeEEEEecCCCCCCcceEEEEeCCCCCc---ceEEEEeeCCcEEEEeccC--CeEEEEecCCC
Confidence 678888742 235688888875 1111111 11111 22333 367899864322 67899998876
Q ss_pred cEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE---CCEEEEEe
Q 045821 191 NWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV---DDALYVLD 265 (352)
Q Consensus 191 ~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~~~g 265 (352)
.-+.+..... ..-..+++ .++.||+..-. ....|+++++....-+.+... ... ....+.+ ++.||+..
T Consensus 486 ~~~~l~~~~~-~~P~giavDp~~g~ly~td~~----~~~~I~~~~~dG~~~~~l~~~-~l~-~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 486 KRKTLFREQG-SKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTE-NIQ-WPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp CEEEECCCSS-CCCCCEECCSSSSCCEECCCS----SSCCEEBCCSSSCCCCEESCS-SCS-SCCCEEECTTTCCEEEEE
T ss_pred ceEEEEeCCC-CCcceEEEccCCCcEEEcccC----CCCeEEEEeCCCCCeeEEEeC-CCC-CccEEEEeccCCEEEEEe
Confidence 5444422111 11122333 26788886311 113577777654333222111 111 1112332 57899887
Q ss_pred cCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-CCceEEEEEcCC
Q 045821 266 QSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG-KGCSAVVIDVGN 322 (352)
Q Consensus 266 g~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g-G~~~~~~~d~~~ 322 (352)
...+ .|+++|+....-..+..... ......++++.++.||+.- +...+..+|..+
T Consensus 559 ~~~~-~I~~~d~dG~~~~~~~~~~~-~~~~P~glavd~~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 559 SKLH-SISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp TTTT-EEEEECSSSSCCEEECCCSS-SCSSCCCCEEETTEEEEECSTTTCEEEEETTT
T ss_pred cCCC-eEEEEccCCCceEEEEecCC-cCCCceEeEEECCEEEEEeCCCCeEEEEEccC
Confidence 6544 89999998654444433221 1234456777888999875 344566788653
No 183
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.73 E-value=1.4 Score=41.58 Aligned_cols=202 Identities=12% Similarity=0.104 Sum_probs=108.4
Q ss_pred CCEEEEEEecCCCCceeEEEecC-CCCCCCeeEeccCCCcc-----cCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDP-NSTRRSWKMIHELPART-----LRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCY 141 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~-~~~~~~w~~~~~~~~~~-----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 141 (352)
++.||+.... .-.++.+|. ..-...|+.-....... +.....+.+..++.||+... ...++.+
T Consensus 62 ~g~vyv~~~~----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~al 130 (571)
T 2ad6_A 62 GDMMYVHSAF----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLAL 130 (571)
T ss_dssp TTEEEEECST----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEE
T ss_pred CCEEEEEeCC----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEE
Confidence 8888877431 124666776 44566787644332100 00112234567889988742 3578999
Q ss_pred ECCCCe--eEec-CCCCCc-ceeeeeEEECCEEEEEeCCCC---CCceEEEeCCCCc--EEEecCCCCcc----------
Q 045821 142 DASMNT--WTDA-APMSTA-RCYFPCGVLNQKIYCIGGLGD---THSWDVYDPRTNN--WKLHTEPNIFT---------- 202 (352)
Q Consensus 142 d~~t~~--W~~~-~~~~~~-r~~~~~~~~~~~iyv~gG~~~---~~~v~~yd~~t~~--W~~~~~~~~~~---------- 202 (352)
|..+++ |+.- ...+.. ....+.++.++.+|+..+... ...+..||..|.+ |+.-...+...
T Consensus 131 D~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~ 210 (571)
T 2ad6_A 131 DAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSA 210 (571)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTT
T ss_pred ECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccc
Confidence 998885 8643 221111 122344566899988654211 2678999998774 87543221100
Q ss_pred ---------------------cce---eEEEE---CCEEEEEccCCC----------CCCceEEEEEeCCCC--ceeecC
Q 045821 203 ---------------------EIE---DSFVM---DGKIYIRCSASA----------ATSHVCALVYEPSTD--SWLHAD 243 (352)
Q Consensus 203 ---------------------~~~---~~~~~---~g~iyv~GG~~~----------~~~~~~i~~yd~~~~--~W~~~~ 243 (352)
... ....+ .+.+|+-.|... ......+.++|+.++ .|+.-.
T Consensus 211 ~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~ 290 (571)
T 2ad6_A 211 NPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQK 290 (571)
T ss_dssp CGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEES
T ss_pred cccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecC
Confidence 000 11222 468888644211 111236899999776 487542
Q ss_pred CCCC---C-CCCCcEEE---ECC---EEEEEecCCCCeEEEEeCCCCc
Q 045821 244 ANMA---S-GWRGPAVV---VDD---ALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 244 ~~~~---~-~~~~~~~~---~~~---~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
.+.. . ......+. .+| ++++++..++ .++.+|.++++
T Consensus 291 ~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G-~l~~lD~~tG~ 337 (571)
T 2ad6_A 291 TPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG-ILYTLNRENGN 337 (571)
T ss_dssp STTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS-EEEEEETTTCC
T ss_pred CCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc-EEEEEECCCCC
Confidence 2111 0 11222222 256 3666666555 78888887765
No 184
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.72 E-value=0.84 Score=38.99 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=88.7
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECC-CCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCC-cEEE
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDAS-MNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTN-NWKL 194 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~-t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~-~W~~ 194 (352)
.++.||+... ...++.||+. ...|......+ ...+.+.. ++.+|+... + ..+..||+... .|+.
T Consensus 106 ~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~~g~l~vgt~-~--~~l~~~d~~g~~~~~~ 172 (330)
T 3hxj_A 106 FEDILYVTSM-------DGHLYAINTDGTEKWRFKTKKA---IYATPIVSEDGTIYVGSN-D--NYLYAINPDGTEKWRF 172 (330)
T ss_dssp ETTEEEEECT-------TSEEEEECTTSCEEEEEECSSC---CCSCCEECTTSCEEEECT-T--SEEEEECTTSCEEEEE
T ss_pred ECCEEEEEec-------CCEEEEEcCCCCEEEEEcCCCc---eeeeeEEcCCCEEEEEcC-C--CEEEEECCCCCEeEEE
Confidence 3888887532 2468889987 22465443211 12223334 677777432 2 56899999822 3654
Q ss_pred ecCCCCcccceeEEE-ECCEEEEEccCCCCCCceEEEEEeCCC-CceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeE
Q 045821 195 HTEPNIFTEIEDSFV-MDGKIYIRCSASAATSHVCALVYEPST-DSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKL 272 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~-~~g~iyv~GG~~~~~~~~~i~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v 272 (352)
-. +.... ...+. .+|.||+.. ..+++||... ..|+..... .......+.-++.||+... .+ .+
T Consensus 173 ~~--~~~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~--~~~~~~~~~~~g~l~v~t~-~~-gl 237 (330)
T 3hxj_A 173 KT--NDAIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGY--WTVTRPAISEDGTIYVTSL-DG-HL 237 (330)
T ss_dssp EC--SSCCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSS--CCCSCCEECTTSCEEEEET-TT-EE
T ss_pred ec--CCCce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCC--cceeceEECCCCeEEEEcC-CC-eE
Confidence 32 11111 22233 478888864 2388888442 346654221 1112222333557776542 22 79
Q ss_pred EEEeCCCCceEEccCCCCCcCCCCceEEEe-CCEEEEEcCCceEEEEEcC
Q 045821 273 MMWQKESREWSPVGRLSTLLTRPPCKLVAI-GKTIFVIGKGCSAVVIDVG 321 (352)
Q Consensus 273 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~d~~ 321 (352)
++||+..+.......... . ...++.. ++.||+-........||+.
T Consensus 238 ~~~~~~g~~~~~~~~~~~---~-~~~~~~~~~g~l~v~t~~ggl~~~d~~ 283 (330)
T 3hxj_A 238 YAINPDGTEKWRFKTGKR---I-ESSPVIGNTDTIYFGSYDGHLYAINPD 283 (330)
T ss_dssp EEECTTSCEEEEEECSSC---C-CSCCEECTTSCEEEECTTCEEEEECTT
T ss_pred EEECCCCCEeEEeeCCCC---c-cccceEcCCCeEEEecCCCCEEEECCC
Confidence 999876555323321111 1 1123333 6778876554467778864
No 185
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.68 E-value=0.83 Score=44.04 Aligned_cols=190 Identities=12% Similarity=0.036 Sum_probs=94.2
Q ss_pred ceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCE-EEEEeCCCCCCCCCCeEEEEECCCC-eeEecCCCCCc
Q 045821 82 RVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKN-AYLLGGCGWSEDATSEVYCYDASMN-TWTDAAPMSTA 157 (352)
Q Consensus 82 ~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~t~-~W~~~~~~~~~ 157 (352)
...++++|. .++.-..+.... ..........+ +++ |++.. .+.. .....++.+|+.++ ....+......
T Consensus 234 ~~~l~~~d~--~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~-~~~~-~~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 234 HVTVGIYHL--ATGKTVYLQTGE---PKEKFLTNLSWSPDENILYVAE-VNRA-QNECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp EEEEEEEET--TTTEEEECCCCS---CTTCEEEEEEECTTSSEEEEEE-ECTT-SCEEEEEEEETTTCCEEEEEEEEECS
T ss_pred eeEEEEEEC--CCCceEeeccCC---CCceeEeeEEEECCCCEEEEEE-eCCC-CCeeEEEEEECCCCceeeEEEEccCC
Confidence 356788888 776654443221 11111122222 444 54433 2221 23458899999988 66554321111
Q ss_pred ce---eeeeEE-E--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECC-EEEEEccCCCCCCceEEE
Q 045821 158 RC---YFPCGV-L--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDG-KIYIRCSASAATSHVCAL 230 (352)
Q Consensus 158 r~---~~~~~~-~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g-~iyv~GG~~~~~~~~~i~ 230 (352)
.. ...++. - ++++++.+..+....++.+|......+.+...........+..-+| .||+.+ .........++
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~-~~~~~~~~~l~ 385 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFES-TEASPLERHFY 385 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEE-SSSCTTCBEEE
T ss_pred CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEe-cCCCCceEEEE
Confidence 10 011222 2 6776655554433678888877766666643211111101122244 566654 33222345789
Q ss_pred EEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC---CeEEEEeCCCCc
Q 045821 231 VYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG---TKLMMWQKESRE 281 (352)
Q Consensus 231 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~---~~v~~yd~~~~~ 281 (352)
.+|..+.+.+.+... ......+..-+++.+++..... ..++++|.++++
T Consensus 386 ~~d~~~~~~~~l~~~--~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 386 CIDIKGGKTKDLTPE--SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEETTCCCCEESCCS--SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEcCCCCceeccCC--CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 999988776666421 1111112233565554443221 469999998876
No 186
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.65 E-value=0.17 Score=45.83 Aligned_cols=188 Identities=6% Similarity=0.029 Sum_probs=90.6
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCC-cceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMST-ARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~-~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
++.+++.|+.+ ..+.+||..+++-..+-.+.. ...-.+++. .++..++.|+.+ ..+.++|.+++..+.+
T Consensus 131 ~~~~lasGs~d------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D--~~v~iwd~~~~~~~~~ 202 (435)
T 4e54_B 131 HPSTVAVGSKG------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME--GTTRLQDFKGNILRVF 202 (435)
T ss_dssp CTTCEEEEETT------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS--SCEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC--CEEEEeeccCCceeEE
Confidence 34566666643 347788887665332222111 111112222 245666667665 6788999988876655
Q ss_pred cCCCCccc-cee-EEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE--C-CEEEEEecCCCC
Q 045821 196 TEPNIFTE-IED-SFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV--D-DALYVLDQSSGT 270 (352)
Q Consensus 196 ~~~~~~~~-~~~-~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~-~~l~~~gg~~~~ 270 (352)
........ ... ...-++++++.|+.++ .+..+|.....-..+. .+...-..+.+ + +.+++.|+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~~~~~~---~h~~~v~~v~~~p~~~~~~~s~s~d~- 273 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKELWNLR---MHKKKVTHVALNPCCDWFLATASVDQ- 273 (435)
T ss_dssp ECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCBCCCSB---CCSSCEEEEEECTTCSSEEEEEETTS-
T ss_pred eccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcceeEEEe---cccceEEeeeecCCCceEEEEecCcc-
Confidence 43222111 112 2333677777765543 4777887654322211 11111112332 3 34666776665
Q ss_pred eEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcCCc
Q 045821 271 KLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVGNI 323 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~~~ 323 (352)
.+.+||..+..-...-.........-.++. ..+++.++.|+.+ .+.+||+...
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred eeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 888999876432111000000000001111 1245555555554 4567887653
No 187
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.65 E-value=1.7 Score=41.87 Aligned_cols=107 Identities=10% Similarity=0.080 Sum_probs=59.7
Q ss_pred CceEEEeCCCCcEEEecCCCCcccceeEE--EECCEEEEEccCCCCCCceEEEEEeCCCC-ceeecCCCCCCCC----CC
Q 045821 180 HSWDVYDPRTNNWKLHTEPNIFTEIEDSF--VMDGKIYIRCSASAATSHVCALVYEPSTD-SWLHADANMASGW----RG 252 (352)
Q Consensus 180 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~--~~~g~iyv~GG~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~----~~ 252 (352)
..++++|..+.+-..+............+ .-+|+..+++..+.......++.+|..+. ....+.......+ ..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 67899999988765554221111221222 23666444434443334458899999887 6665532111111 12
Q ss_pred cEEEE--CCEEEEEecCCC-CeEEEEeCCCCceEEcc
Q 045821 253 PAVVV--DDALYVLDQSSG-TKLMMWQKESREWSPVG 286 (352)
Q Consensus 253 ~~~~~--~~~l~~~gg~~~-~~v~~yd~~~~~W~~~~ 286 (352)
....- ++++++.+...+ ..++.+|..++....+.
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 23444 788766665444 57888887777776664
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.62 E-value=0.98 Score=39.01 Aligned_cols=221 Identities=10% Similarity=0.038 Sum_probs=111.9
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCC--eeEecCCCC-----
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMN--TWTDAAPMS----- 155 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~--~W~~~~~~~----- 155 (352)
.++.+|+ .++......... ....-..++.- ++.+|+.... ...+.+||+..+ .-..+....
T Consensus 70 ~i~~~d~--~~g~~~~~~~~~---~~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 70 TILVIDP--NNAEILQSSGKN---LFYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSD 138 (329)
T ss_dssp CEEEECT--TTCCEEEEECTT---TCSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCS
T ss_pred cEEEEEC--CCCeEEeccCCC---ccCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCC
Confidence 4778898 777654332211 01111233333 5678887642 356889998755 222222110
Q ss_pred -Ccc-eeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCC-------Ccccce-eEEEE-C-CEEEEEccCC
Q 045821 156 -TAR-CYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPN-------IFTEIE-DSFVM-D-GKIYIRCSAS 221 (352)
Q Consensus 156 -~~r-~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~-------~~~~~~-~~~~~-~-g~iyv~GG~~ 221 (352)
... ....+++. ++.+|+..++.. ..+.+||+....-..+.... ...... .+++. + ++||+.....
T Consensus 139 ~~~~~~P~~ia~~~~~g~lyv~d~~~~-~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 139 QNHFCQPTDVAVEPSTGAVFVSDGYCN-SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp TTCCSSEEEEEECTTTCCEEEEECSSC-CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred ccccCCCcEEEEeCCCCeEEEEeCCCC-CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 111 12233333 578999986322 78899996554333332111 111112 23332 4 8999985332
Q ss_pred CCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEEECCEEEEEecCC------CCeEEEEeCCCCceEEc-cCCCCCcC
Q 045821 222 AATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVVVDDALYVLDQSS------GTKLMMWQKESREWSPV-GRLSTLLT 293 (352)
Q Consensus 222 ~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~~~gg~~------~~~v~~yd~~~~~W~~~-~~~~~~~~ 293 (352)
..|.+||+.+++.... ................+.+|...|.. ...+.+||..+++.... +..+.. .
T Consensus 218 -----~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~-~ 291 (329)
T 3fvz_A 218 -----GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH-F 291 (329)
T ss_dssp -----TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSC-C
T ss_pred -----CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc-c
Confidence 3689999986665432 21111111111122235555555422 24789999888776544 211111 1
Q ss_pred CCCceEEE-eCCEEEEEcC-CceEEEEEcCC
Q 045821 294 RPPCKLVA-IGKTIFVIGK-GCSAVVIDVGN 322 (352)
Q Consensus 294 ~~~~~~~~-~~~~i~v~gG-~~~~~~~d~~~ 322 (352)
..-.+++. .++.||+... ...+..|+++.
T Consensus 292 ~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 292 DMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 22233333 3568998764 44577788764
No 189
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.60 E-value=1.2 Score=39.99 Aligned_cols=187 Identities=15% Similarity=0.079 Sum_probs=99.2
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc-EEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN-WKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~-W~~~ 195 (352)
++.||+... ....+.++|+.+++-..+..... ..+ .+.. ++.+|+...... ..++.+|+.+.. .+.+
T Consensus 141 ~g~lyv~d~------~~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~~-~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 141 NNTVLAYQR------DDPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEGT-HTVYVYMKASGWAPTRI 210 (409)
T ss_dssp TTEEEEEET------TTTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSSTT-CEEEEEEGGGTTCEEEE
T ss_pred CCCEEEEec------CCCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCCC-ceEEEEEcCCCceeEEe
Confidence 678998864 23578999999887655432211 112 2222 346777654321 378999987653 2333
Q ss_pred cCC-C-CcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecC---CCCCCCCC---CcEEEE-CCEEEEE
Q 045821 196 TEP-N-IFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHAD---ANMASGWR---GPAVVV-DDALYVL 264 (352)
Q Consensus 196 ~~~-~-~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~---~~~~~~~~---~~~~~~-~~~l~~~ 264 (352)
... . ....-+.+++. ++.||+... ...+++||+.+.....+. ........ +.++.- ++.||+.
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 111 1 11111223332 689999532 126999999877655441 11111122 223333 5889988
Q ss_pred ecCCCCeEEEEeCCCCceEEccCC-CCC---------cCCCCceEEE-eCCEEEEEc--CCceEEEEEcCC
Q 045821 265 DQSSGTKLMMWQKESREWSPVGRL-STL---------LTRPPCKLVA-IGKTIFVIG--KGCSAVVIDVGN 322 (352)
Q Consensus 265 gg~~~~~v~~yd~~~~~W~~~~~~-~~~---------~~~~~~~~~~-~~~~i~v~g--G~~~~~~~d~~~ 322 (352)
....+ .|++||++...-...+.. ... ....-.+++. .++.||+.- +...+..+|+..
T Consensus 285 d~~~~-~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 285 DQNLS-SVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp ETTTT-EEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred eCCCC-EEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence 76544 899999876532222221 000 0111223333 256688875 455666788543
No 190
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.60 E-value=1.8 Score=41.85 Aligned_cols=117 Identities=15% Similarity=0.205 Sum_probs=67.7
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcc-----cCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPART-----LRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYD 142 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~-----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d 142 (352)
++.||+.... -.++.+|..+-...|+.-...+... +.....+.+..++.||+... ...++.+|
T Consensus 77 ~g~vyv~~~~-----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD 144 (677)
T 1kb0_A 77 DGIMYVSASW-----SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALD 144 (677)
T ss_dssp TTEEEEECGG-----GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEE
T ss_pred CCEEEEECCC-----CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEE
Confidence 7888876432 2467778722233476544332100 01122345567888888632 35789999
Q ss_pred CCCCe--eEecCC-C-CC-cceeeeeEEECCEEEEEeCCCC---CCceEEEeCCCCc--EEEec
Q 045821 143 ASMNT--WTDAAP-M-ST-ARCYFPCGVLNQKIYCIGGLGD---THSWDVYDPRTNN--WKLHT 196 (352)
Q Consensus 143 ~~t~~--W~~~~~-~-~~-~r~~~~~~~~~~~iyv~gG~~~---~~~v~~yd~~t~~--W~~~~ 196 (352)
..|++ |+.-.. - .. .....+.++.++.+|+..+... ...+..||..|++ |+.-.
T Consensus 145 ~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 145 AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp TTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 98886 775432 1 11 1223345567889988654221 1678999999875 87643
No 191
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.60 E-value=0.92 Score=38.58 Aligned_cols=192 Identities=8% Similarity=0.073 Sum_probs=88.3
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceE-EEEE---CCEEEEEeCCCCCCCCCCeEEEEEC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMG-FEVL---GKNAYLLGGCGWSEDATSEVYCYDA 143 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~ 143 (352)
++.+++.|+. .+...+|.++. ....+..+..+.. ...... +... ++.+++.|+.+ ..+.+||.
T Consensus 22 ~~~~l~~~~~--dg~i~iw~~~~--~~~~~~~~~~~~~---~~~~v~~~~~~~~~d~~~l~s~~~d------g~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSS--DQHIKVFKLDK--DTSNWELSDSWRA---HDSSIVAIDWASPEYGRIIASASYD------KTVKLWEE 88 (351)
T ss_dssp SSSEEEEEET--TSEEEEEEECS--SSCCEEEEEEEEC---CSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEE
T ss_pred CCCEEEEeeC--CCeEEEEECCC--CCCcceecceecc---CCCcEEEEEEcCCCCCCEEEEEcCC------CeEEEEec
Confidence 4445556653 23455554444 4555555443331 111222 2222 25666666643 35777887
Q ss_pred CCCe-------eEecCCCCCcceeeeeEEE--C--CEEEEEeCCCCCCceEEEeCCCCc----EEEec---CC---CCcc
Q 045821 144 SMNT-------WTDAAPMSTARCYFPCGVL--N--QKIYCIGGLGDTHSWDVYDPRTNN----WKLHT---EP---NIFT 202 (352)
Q Consensus 144 ~t~~-------W~~~~~~~~~r~~~~~~~~--~--~~iyv~gG~~~~~~v~~yd~~t~~----W~~~~---~~---~~~~ 202 (352)
.+++ |..+..+...........+ + +..++.|+.+ ..+.+||..+.+ |.... .+ +...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--GILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC--CcEEEecCCChHHhccccccccccccccccCCc
Confidence 7642 2322222211111112222 3 5566666654 678899987653 32111 01 1111
Q ss_pred cc-eeEEEE-----CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEE--EECC----EEEEEecCCCC
Q 045821 203 EI-EDSFVM-----DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAV--VVDD----ALYVLDQSSGT 270 (352)
Q Consensus 203 ~~-~~~~~~-----~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~--~~~~----~l~~~gg~~~~ 270 (352)
.. ...... ++.+++.|+..+ .+..++....+...+.....+...-..+ .-++ .+++.|+.++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg- 240 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQ-----AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG- 240 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTE-----EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS-
T ss_pred ccceeEEEeccCCCCCcEEEEecCCC-----cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC-
Confidence 11 111222 366666655442 3445555555554332211111111112 2244 7778887766
Q ss_pred eEEEEeCCCC
Q 045821 271 KLMMWQKESR 280 (352)
Q Consensus 271 ~v~~yd~~~~ 280 (352)
.+.+||..+.
T Consensus 241 ~i~iwd~~~~ 250 (351)
T 3f3f_A 241 RIRIFKITEK 250 (351)
T ss_dssp CEEEEEEEEC
T ss_pred eEEEEeCCCC
Confidence 7888887653
No 192
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.59 E-value=0.11 Score=53.98 Aligned_cols=187 Identities=9% Similarity=0.035 Sum_probs=94.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEP 198 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~ 198 (352)
++..+++|+.+ ..+.+||..+++..................-+++..+.|+.+ ..+.+||..++....+...
T Consensus 972 ~g~~l~~g~~~------g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d--g~i~vwd~~~~~~~~~~~~ 1043 (1249)
T 3sfz_A 972 HLEYVAFGDED------GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED--SVIQVWNWQTGDYVFLQAH 1043 (1249)
T ss_dssp TSSEEEEEETT------SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS--SBEEEEETTTTEEECCBCC
T ss_pred CCCEEEEEcCC------CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC--CEEEEEECCCCceEEEecC
Confidence 44455555432 357788887765332211111111111112256666667655 6789999999876543311
Q ss_pred CCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeC
Q 045821 199 NIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 199 ~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~ 277 (352)
.......... ++.+ +.++.++ .+..||..+++-...-..........++..+++.++.|+.++ .+.+||.
T Consensus 1044 --~~~v~~~~~~~~~~l-~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-~v~iwd~ 1114 (1249)
T 3sfz_A 1044 --QETVKDFRLLQDSRL-LSWSFDG-----TVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK-TAKIWSF 1114 (1249)
T ss_dssp --SSCEEEEEECSSSEE-EEEESSS-----EEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS-CCCEECS
T ss_pred --CCcEEEEEEcCCCcE-EEEECCC-----cEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-cEEEEEC
Confidence 1111122333 4454 4444442 578888877653322111111112223344677777777666 7889988
Q ss_pred CCCceEEccCCCCCcCCCCceE-EEeCCEEEEEcCCce-EEEEEcCCccc
Q 045821 278 ESREWSPVGRLSTLLTRPPCKL-VAIGKTIFVIGKGCS-AVVIDVGNIGN 325 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~~~~~~~~-~~~~~~i~v~gG~~~-~~~~d~~~~~w 325 (352)
.+.+ .+..+... .....++ ...++++++.|+.+. +.+||+.+...
T Consensus 1115 ~~~~--~~~~l~~h-~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1115 DLLS--PLHELKGH-NGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp SSSS--CSBCCCCC-SSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCC
T ss_pred CCcc--eeeeeccC-CCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 7654 22222211 1111122 223666777776554 66899886553
No 193
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.58 E-value=1 Score=46.56 Aligned_cols=188 Identities=8% Similarity=0.052 Sum_probs=87.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE---CCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL---NQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~---~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
++..++.|+. ...+.+||..+++....-....... .+++.. ++.+.+.|+.+ ..+.+||..+......
T Consensus 668 ~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~sg~~d--~~v~vwd~~~~~~~~~ 738 (1249)
T 3sfz_A 668 DDSYIATCSA------DKKVKIWDSATGKLVHTYDEHSEQV-NCCHFTNKSNHLLLATGSND--FFLKLWDLNQKECRNT 738 (1249)
T ss_dssp TSSEEEEEET------TSEEEEEETTTCCEEEEEECCSSCE-EEEEECSSSSCCEEEEEETT--SCEEEEETTSSSEEEE
T ss_pred CCCEEEEEeC------CCeEEEEECCCCceEEEEcCCCCcE-EEEEEecCCCceEEEEEeCC--CeEEEEECCCcchhhe
Confidence 4555666653 3468899998876432211111111 112221 23455555544 6789999988765433
Q ss_pred cCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceee-cCC--------CCCC----CCCCcEEEECCEEE
Q 045821 196 TEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADA--------NMAS----GWRGPAVVVDDALY 262 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~--------~~~~----~~~~~~~~~~~~l~ 262 (352)
-..........+..-+++..+.|+.++ .+..||..+..-.. +.. .+.. .....+..-+++.+
T Consensus 739 ~~~h~~~v~~~~~sp~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 739 MFGHTNSVNHCRFSPDDELLASCSADG-----TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEESSS-----EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred ecCCCCCEEEEEEecCCCEEEEEECCC-----eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 211111111112223666666665542 46777776553221 100 0000 11111223356666
Q ss_pred EEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCc-eEEEEEcCCc
Q 045821 263 VLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC-SAVVIDVGNI 323 (352)
Q Consensus 263 ~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~-~~~~~d~~~~ 323 (352)
++++. + .+..||..+......-..... ....+.....++.+++.|+.+ .+.++|..+.
T Consensus 814 ~~~~~-~-~v~~~d~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~ 872 (1249)
T 3sfz_A 814 IVAAK-N-KVLLFDIHTSGLLAEIHTGHH-STIQYCDFSPYDHLAVIALSQYCVELWNIDSR 872 (1249)
T ss_dssp EEEET-T-EEEEEETTTCCEEEEEECSSS-SCCCEEEECSSTTEEEEECSSSCEEEEETTTT
T ss_pred EEEcC-C-cEEEEEecCCCceeEEcCCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC
Confidence 66553 2 899999988765443221111 111112222344555555444 4556776653
No 194
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.53 E-value=1.1 Score=38.85 Aligned_cols=150 Identities=7% Similarity=-0.031 Sum_probs=76.0
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeE-EEECCEEEEEccCCCCCCceEEEEEeCCCCcee--ecC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDS-FVMDGKIYIRCSASAATSHVCALVYEPSTDSWL--HAD 243 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~-~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~--~~~ 243 (352)
++..++.|+.+ ..+.+||..+.+-..+...........+ ..-++.+++.|+.++ .+..||..+.+-. .+.
T Consensus 138 ~~~~l~s~s~d--g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~~~~~~~ 210 (343)
T 3lrv_A 138 NTEYFIWADNR--GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQASSRFP 210 (343)
T ss_dssp -CCEEEEEETT--CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCTTSCCEECC
T ss_pred CCCEEEEEeCC--CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCCCccEEe
Confidence 45666767755 6789999998876443322221112222 223678888866553 5888898776533 222
Q ss_pred CCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceE-EccCCCCC-cCCCCceEE-EeCCEEEEE-cC-CceEE
Q 045821 244 ANMASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWS-PVGRLSTL-LTRPPCKLV-AIGKTIFVI-GK-GCSAV 316 (352)
Q Consensus 244 ~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~-~~~~~~~~-~~~~~~~~~-~~~~~i~v~-gG-~~~~~ 316 (352)
. .+...-..+. -++..++.++ .+ .+.+||..+..-. .+...... ......++. ..+++.++. ++ ...+.
T Consensus 211 ~--~h~~~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~ 286 (343)
T 3lrv_A 211 V--DEEAKIKEVKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLT 286 (343)
T ss_dssp C--CTTSCEEEEEECTTSSEEEEEE-SS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEE
T ss_pred c--cCCCCEEEEEEeCCCCEEEEEe-CC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEE
Confidence 1 0111111222 2566666666 44 8999999875421 11111100 001111122 224555555 33 55677
Q ss_pred EEEcC--Cccccc
Q 045821 317 VIDVG--NIGNIG 327 (352)
Q Consensus 317 ~~d~~--~~~w~~ 327 (352)
+|+.+ ...|..
T Consensus 287 v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 287 IYKFDKKTKNWTK 299 (343)
T ss_dssp EEEECTTTCSEEE
T ss_pred EEEEcccccceEe
Confidence 88774 445765
No 195
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.47 E-value=1.2 Score=39.18 Aligned_cols=147 Identities=9% Similarity=0.010 Sum_probs=75.2
Q ss_pred EEEEEeCCCCCCceEEEeCCCCcEEEecC--CCCcccce-eEEEE---CCEEEEEccCCCCCCceEEEEEeCCCC--cee
Q 045821 169 KIYCIGGLGDTHSWDVYDPRTNNWKLHTE--PNIFTEIE-DSFVM---DGKIYIRCSASAATSHVCALVYEPSTD--SWL 240 (352)
Q Consensus 169 ~iyv~gG~~~~~~v~~yd~~t~~W~~~~~--~~~~~~~~-~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~--~W~ 240 (352)
..++.|+.+ ..+.+||..+++-...-. .+..+... ..+.+ ++.+++.|+.++ .+..||.... .-.
T Consensus 171 ~~l~s~s~D--~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~ 243 (380)
T 3iz6_a 171 TRLITGSGD--QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVR 243 (380)
T ss_dssp SCEEEECTT--SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCE
T ss_pred CEEEEECCC--CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceE
Confidence 344555544 688999999886543321 11222111 12222 677888876653 4777887522 122
Q ss_pred ecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEccCC-CCCc----CCCCceEEEeCCEEEEEcCCc-e
Q 045821 241 HADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVGRL-STLL----TRPPCKLVAIGKTIFVIGKGC-S 314 (352)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~-~~~~----~~~~~~~~~~~~~i~v~gG~~-~ 314 (352)
.+.. ...........-++..++.|+.++ .+.+||..++.-...-.. +... ..........++++++.|+.+ .
T Consensus 244 ~~~~-h~~~v~~v~~~p~~~~l~s~s~D~-~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 244 TYHG-HEGDINSVKFFPDGQRFGTGSDDG-TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp EECC-CSSCCCEEEECTTSSEEEEECSSS-CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EECC-cCCCeEEEEEecCCCeEEEEcCCC-eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 2211 011111111223677777887766 899999988764433211 1100 011122223466666667655 4
Q ss_pred EEEEEcCCcc
Q 045821 315 AVVIDVGNIG 324 (352)
Q Consensus 315 ~~~~d~~~~~ 324 (352)
+.++|.....
T Consensus 322 i~vwd~~~~~ 331 (380)
T 3iz6_a 322 CYVWDTLLAE 331 (380)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCc
Confidence 6689976543
No 196
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.44 E-value=0.86 Score=44.18 Aligned_cols=104 Identities=7% Similarity=-0.020 Sum_probs=57.8
Q ss_pred ceEEEeCCC-CcEEEecCCC-Cccc-ceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCC----CCCc
Q 045821 181 SWDVYDPRT-NNWKLHTEPN-IFTE-IEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASG----WRGP 253 (352)
Q Consensus 181 ~v~~yd~~t-~~W~~~~~~~-~~~~-~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~----~~~~ 253 (352)
.++++|..+ .+-+.+.... .... ...+. -+|+..++...........++.+|..+.+...+....... ....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 778889988 7655554221 1111 12233 5555444433333334458999999988876653211111 1233
Q ss_pred EEEECCEEEEEecCCC-CeEEEEeCCCCceEEcc
Q 045821 254 AVVVDDALYVLDQSSG-TKLMMWQKESREWSPVG 286 (352)
Q Consensus 254 ~~~~~~~l~~~gg~~~-~~v~~yd~~~~~W~~~~ 286 (352)
+..-++++++.++..+ ..++.+|..+. ...+.
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred EECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 4445777776666554 57888887766 55554
No 197
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.44 E-value=0.49 Score=40.92 Aligned_cols=143 Identities=13% Similarity=0.121 Sum_probs=72.4
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEE---ECCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGV---LNQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~---~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
++..++.|+. ...+.+||..+++...+.....+- .++.. -++..++.++.+ ..+.+||..+.+-...
T Consensus 97 ~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 97 DGSKVFTASC------DKTAKMWDLSSNQAIQIAQHDAPV--KTIHWIKAPNYSCVMTGSWD--KTLKFWDTRSSNPMMV 166 (368)
T ss_dssp TSSEEEEEET------TSEEEEEETTTTEEEEEEECSSCE--EEEEEEECSSCEEEEEEETT--SEEEEECSSCSSCSEE
T ss_pred CCCEEEEEcC------CCcEEEEEcCCCCceeeccccCce--EEEEEEeCCCCCEEEEccCC--CcEEEEECCCCcEEEE
Confidence 4555555553 346889999988755433222211 12222 256777777765 6789999887642211
Q ss_pred cCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCC--ceeecCCCCCCCCCCcEEEEC----CEEEEEecCCC
Q 045821 196 TEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTD--SWLHADANMASGWRGPAVVVD----DALYVLDQSSG 269 (352)
Q Consensus 196 ~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~----~~l~~~gg~~~ 269 (352)
-.. .............+++.++.. .+..||.... .+..+............+..+ ...++.|+.++
T Consensus 167 ~~~--~~~~~~~~~~~~~~~~~~~~~------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 167 LQL--PERCYCADVIYPMAVVATAER------GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG 238 (368)
T ss_dssp EEC--SSCEEEEEEETTEEEEEEGGG------CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS
T ss_pred Eec--CCCceEEEecCCeeEEEeCCC------cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC
Confidence 111 112222333455555543222 3667776544 344443322211111122222 23366666665
Q ss_pred CeEEEEeCCCC
Q 045821 270 TKLMMWQKESR 280 (352)
Q Consensus 270 ~~v~~yd~~~~ 280 (352)
.+.+||....
T Consensus 239 -~i~i~~~~~~ 248 (368)
T 3mmy_A 239 -RVAIHYINPP 248 (368)
T ss_dssp -EEEEEESSCS
T ss_pred -cEEEEecCCC
Confidence 8999998875
No 198
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.41 E-value=0.089 Score=45.54 Aligned_cols=147 Identities=12% Similarity=0.039 Sum_probs=73.6
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEE-EECC-EEEEEccCCCCCCceEEEEEeCCCCceee-cC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSF-VMDG-KIYIRCSASAATSHVCALVYEPSTDSWLH-AD 243 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~-~~~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~ 243 (352)
++++|+.++.+ ..+.++|..+++....-..+........+ .-+| .+|+.+... ..+..||+.+++-.. +.
T Consensus 10 ~~~~~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 10 GHEYMIVTNYP--NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp TCEEEEEEETT--TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEeCCC--CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcEEEEEE
Confidence 56788877655 78899999988654332222210112222 2345 577775322 368899998776542 22
Q ss_pred CCCC-----CCCCCcEEEECCE-EEEEecC----------CCCeEEEEeCCCCceEE-ccCCCCCcCCCCceE-EEeCCE
Q 045821 244 ANMA-----SGWRGPAVVVDDA-LYVLDQS----------SGTKLMMWQKESREWSP-VGRLSTLLTRPPCKL-VAIGKT 305 (352)
Q Consensus 244 ~~~~-----~~~~~~~~~~~~~-l~~~gg~----------~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~-~~~~~~ 305 (352)
.... ..-...++.-+++ ||+.+.. ....+.+||+++++-.+ +...+. .....++ ...+++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGS 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSC
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCCc
Confidence 1110 0011222333554 4544421 02389999998743211 111111 1111222 233566
Q ss_pred EEEEcCCceEEEEEcCCcc
Q 045821 306 IFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 306 i~v~gG~~~~~~~d~~~~~ 324 (352)
+|+.++ .+.++|+++..
T Consensus 161 l~~~~~--~i~~~d~~~~~ 177 (349)
T 1jmx_B 161 LYVAGP--DIYKMDVKTGK 177 (349)
T ss_dssp EEEESS--SEEEECTTTCC
T ss_pred EEEccC--cEEEEeCCCCc
Confidence 777544 37788887654
No 199
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.40 E-value=1.4 Score=39.27 Aligned_cols=218 Identities=14% Similarity=0.186 Sum_probs=112.4
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE---CCEEEEEeCCCCCCCCCCeEEEEECC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL---GKNAYLLGGCGWSEDATSEVYCYDAS 144 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~ 144 (352)
++.||+ |+. . -.++++.+....+|+.+.... ....-++++.. .+.||+.+.... .-..+++.+-.
T Consensus 22 ~g~l~v-gt~---~--Gl~~~~~~~~g~~W~~~~~~~---~~~~v~~i~~dp~~~~~l~~g~~~g~---~g~gl~~s~D~ 89 (394)
T 3b7f_A 22 PVMLLV-ATI---K--GAWFLASDPARRTWELRGPVF---LGHTIHHIVQDPREPERMLMAARTGH---LGPTVFRSDDG 89 (394)
T ss_dssp CCEEEE-EET---T--EEEEEEECTTSCSEEEEEEES---TTSEEEEEEECSSSTTCEEEEEEC-----CCEEEEEESST
T ss_pred CCEEEE-Eec---C--ceEEEECCCCCCCceECCccC---CCCceEEEEECCCCCCeEEEEecCCC---CCccEEEeCCC
Confidence 455664 443 1 245555411337899874221 11222333333 467887653211 11256777666
Q ss_pred CCeeEecCCC---CC-c-c-------eeeeeEEE----CCEEEEEeCCCCCCceEEEeCCCCcEEEecCC---CC-----
Q 045821 145 MNTWTDAAPM---ST-A-R-------CYFPCGVL----NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEP---NI----- 200 (352)
Q Consensus 145 t~~W~~~~~~---~~-~-r-------~~~~~~~~----~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~---~~----- 200 (352)
..+|+.+... +. + + .-.+++.. .+.+|+.+.. ..+++.+....+|+.+... +.
T Consensus 90 G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~---ggl~~S~DgG~tW~~~~~~~~~p~~~~~~ 166 (394)
T 3b7f_A 90 GGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP---QGLFRSTDHGASWEPVAGFNDHPMRRAWT 166 (394)
T ss_dssp TSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET---TEEEEESSTTSBCEECHHHHTCTTHHHHH
T ss_pred CCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC---CcEEEEcCCCCCeEECcCccCCccccccc
Confidence 7789987632 11 1 1 11123332 4678876432 4578887778899987531 11
Q ss_pred ---------cccceeEEEE---CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCC----------CCcEEEEC
Q 045821 201 ---------FTEIEDSFVM---DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGW----------RGPAVVVD 258 (352)
Q Consensus 201 ---------~~~~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~----------~~~~~~~~ 258 (352)
......+++. .+.||+.... ..+++.+....+|+.+........ ....+..+
T Consensus 167 ~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~ 240 (394)
T 3b7f_A 167 GGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQH 240 (394)
T ss_dssp CCC----CCCCEEEEEEECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEEC
T ss_pred cccccCCCCCCceeEEEECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEEC
Confidence 0111222222 3578876322 147788888889998754221110 11123322
Q ss_pred ----CEEEEEecCCCCeEEEEeCCCCceEEccC-CCCCcCCCCceEEE---eCCEEEEE
Q 045821 259 ----DALYVLDQSSGTKLMMWQKESREWSPVGR-LSTLLTRPPCKLVA---IGKTIFVI 309 (352)
Q Consensus 259 ----~~l~~~gg~~~~~v~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~---~~~~i~v~ 309 (352)
+.||+... . .|++.+....+|+.+.. +|.......+.++. ..+.||+.
T Consensus 241 ~~~~~~l~vg~~-~--gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 241 PAAPDILYQQNH-C--GIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp SSSTTEEEEEET-T--EEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCCCEEEEEcC-C--eEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 56666432 2 69999999999999864 44311122234443 24678886
No 200
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.46 Score=43.06 Aligned_cols=148 Identities=6% Similarity=-0.069 Sum_probs=72.5
Q ss_pred EEEEEeCCCCCCCCCCeEEEEECC--CCeeE-ecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEE-e
Q 045821 121 NAYLLGGCGWSEDATSEVYCYDAS--MNTWT-DAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKL-H 195 (352)
Q Consensus 121 ~iyv~GG~~~~~~~~~~~~~~d~~--t~~W~-~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~-~ 195 (352)
.+++.|+. ...+.+||.. +++.. .+.....+..-.+++.. ++..++.|+.+ ..+..++..+..... .
T Consensus 116 ~l~~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~--g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 116 RLIACADS------DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF--GDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEEEEEGG------GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT--SEEEEEETTSCCCSSCC
T ss_pred EEEEEECC------CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC--CcEEEEecCCccccccc
Confidence 44566654 2457788877 44322 11100111111112222 45555666543 567888887654321 0
Q ss_pred -cCCCCcc--cceeEEEEC---CEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEEECCEEEEEecCC
Q 045821 196 -TEPNIFT--EIEDSFVMD---GKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVVVDDALYVLDQSS 268 (352)
Q Consensus 196 -~~~~~~~--~~~~~~~~~---g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~~~gg~~ 268 (352)
..+.... ....+..-+ +++++.|+.++ .+..||..+.+.... ............+. ++++++.|+.+
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETTS-----CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCCC-----cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 0111111 111223346 77777766542 477777766543321 11111111111223 77777788766
Q ss_pred CCeEEEEeCCCCceE
Q 045821 269 GTKLMMWQKESREWS 283 (352)
Q Consensus 269 ~~~v~~yd~~~~~W~ 283 (352)
+ .|.+||..+++..
T Consensus 262 ~-~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 262 D-KIFAWDWKTGKNL 275 (450)
T ss_dssp S-EEEEEETTTCCEE
T ss_pred C-eEEEEECCCCcEe
Confidence 6 8999999887643
No 201
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.34 E-value=2.2 Score=41.22 Aligned_cols=195 Identities=8% Similarity=0.050 Sum_probs=96.9
Q ss_pred ceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCC-------CCCCeEEEEECCCCee--EecC
Q 045821 82 RVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSE-------DATSEVYCYDASMNTW--TDAA 152 (352)
Q Consensus 82 ~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~~~d~~t~~W--~~~~ 152 (352)
...++++|. .++.......++ ........-.-+++.++++..+... .....+++++..+.+- ..+.
T Consensus 146 ~~~i~v~dl--~tg~~~~~~~~~---~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 146 EAVLHVIDV--DSGEWSKVDVIE---GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp CCEEEEEET--TTCCBCSSCCBS---CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred eEEEEEEEC--CCCCCcCCcccC---cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 356777888 777653111111 1111111222355555554432210 1245689999887753 2222
Q ss_pred CCCC-cceeeeeEEE-CCEEEEEeCCCC-C-CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceE
Q 045821 153 PMST-ARCYFPCGVL-NQKIYCIGGLGD-T-HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVC 228 (352)
Q Consensus 153 ~~~~-~r~~~~~~~~-~~~iyv~gG~~~-~-~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~ 228 (352)
..+. +........- +++..++..... . ..++.+|..+..++.+....... ...+..+|.+|+.... ......
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~--~~~~~~ 296 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDE--GAPRQR 296 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECT--TCTTCE
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECC--CCCCCE
Confidence 2221 1122222222 454333333222 2 67888887777888876322211 1222356676665322 122347
Q ss_pred EEEEeCCCCc---eeecCCCCCCCCCCcEEEECCEEEEEecCCC-CeEEEEeCCCCceEEc
Q 045821 229 ALVYEPSTDS---WLHADANMASGWRGPAVVVDDALYVLDQSSG-TKLMMWQKESREWSPV 285 (352)
Q Consensus 229 i~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~-~~v~~yd~~~~~W~~~ 285 (352)
++.+|..+.. |+.+-...+..........++.|++....++ ..++.+|...+.-.++
T Consensus 297 l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 297 VFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred EEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 8899987654 8776432211111112334888887766544 4788888765544444
No 202
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.34 E-value=0.56 Score=41.24 Aligned_cols=147 Identities=12% Similarity=0.001 Sum_probs=78.2
Q ss_pred CCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCE-EEEEeCCCCC----CceEEEeCCCCcEEEecCCCCcccceeEE
Q 045821 135 TSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQK-IYCIGGLGDT----HSWDVYDPRTNNWKLHTEPNIFTEIEDSF 208 (352)
Q Consensus 135 ~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~gG~~~~----~~v~~yd~~t~~W~~~~~~~~~~~~~~~~ 208 (352)
...++.+|..+++...+..... ...+....- ++. |++... ... ..++.+|..+..++.+.............
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~-~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTA-WLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCc-ccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 4578999999887766542111 111111111 243 544432 211 57899999888877765411111111122
Q ss_pred -EECCE-EEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE-CCEEEEEecC---------------CCC
Q 045821 209 -VMDGK-IYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV-DDALYVLDQS---------------SGT 270 (352)
Q Consensus 209 -~~~g~-iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~l~~~gg~---------------~~~ 270 (352)
.-+|+ |+.. ..........++.+|+.+++...+..... . ...... +++++++++. ...
T Consensus 245 ~spdg~~l~~~-~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 245 WIPDGSAMAYV-SYFKGQTDRVIYKANPETLENEEVMVMPP--C-SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp ECTTSSCEEEE-EEETTTCCEEEEEECTTTCCEEEEEECCS--E-EEEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ECCCCCEEEEE-ecCCCCccceEEEEECCCCCeEEeeeCCC--C-CCCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 22565 4444 22222222358999998887766543211 1 123344 6776665431 124
Q ss_pred eEEEEeCCCCceEEccC
Q 045821 271 KLMMWQKESREWSPVGR 287 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~ 287 (352)
.++++|+.+++...+..
T Consensus 321 ~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 321 FLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp EEEEEETTTTBCCEEEE
T ss_pred cEEEEecccCceEEccC
Confidence 89999999887766643
No 203
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.33 E-value=0.095 Score=46.41 Aligned_cols=104 Identities=8% Similarity=0.026 Sum_probs=53.8
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE---CCEEEEEccCCCCCCceEEEEEeCCCCceeecC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM---DGKIYIRCSASAATSHVCALVYEPSTDSWLHAD 243 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~ 243 (352)
++.+++.++.+ ..+.+||..+..-...-....... ...... ++.+++.|+..+ .+..||..+.+-...-
T Consensus 111 ~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~v~~~d~~~~~~~~~~ 182 (408)
T 4a11_B 111 DTGMFTSSSFD--KTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGP-----KVQLCDLKSGSCSHIL 182 (408)
T ss_dssp CTTCEEEEETT--SEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSS-----SEEEEESSSSCCCEEE
T ss_pred CCcEEEEEeCC--CeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCC-----eEEEEeCCCcceeeee
Confidence 44566666654 678999998876544332221111 111111 344666655442 4778888665432211
Q ss_pred CCCCCCCCCcEEE--ECCE-EEEEecCCCCeEEEEeCCCCc
Q 045821 244 ANMASGWRGPAVV--VDDA-LYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 244 ~~~~~~~~~~~~~--~~~~-l~~~gg~~~~~v~~yd~~~~~ 281 (352)
. ........+. -++. +++.|+.++ .+.+||..+..
T Consensus 183 ~--~~~~~v~~~~~~~~~~~ll~~~~~dg-~i~i~d~~~~~ 220 (408)
T 4a11_B 183 Q--GHRQEILAVSWSPRYDYILATASADS-RVKLWDVRRAS 220 (408)
T ss_dssp C--CCCSCEEEEEECSSCTTEEEEEETTS-CEEEEETTCSS
T ss_pred c--CCCCcEEEEEECCCCCcEEEEEcCCC-cEEEEECCCCC
Confidence 1 0111111122 2344 677777766 89999987653
No 204
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.31 E-value=2 Score=40.73 Aligned_cols=119 Identities=16% Similarity=0.179 Sum_probs=70.0
Q ss_pred EEEECCEEEEEeCCCCCCCCCCeEEEEEC-CCCe--eEecCCCCCc-----c---eeeeeEE--ECCE----EEEEeCCC
Q 045821 115 FEVLGKNAYLLGGCGWSEDATSEVYCYDA-SMNT--WTDAAPMSTA-----R---CYFPCGV--LNQK----IYCIGGLG 177 (352)
Q Consensus 115 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~-~t~~--W~~~~~~~~~-----r---~~~~~~~--~~~~----iyv~gG~~ 177 (352)
-++.++.||+.... ...++.+|. .+++ |+.-...... + .....++ .+++ ||+....
T Consensus 58 P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d- 130 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD- 130 (599)
T ss_dssp CEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT-
T ss_pred cEEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC-
Confidence 35669999998542 346899999 7775 8765443211 1 1223455 5666 8886432
Q ss_pred CCCceEEEeCCCCc--EEEecCCCCc--ccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc--eeec
Q 045821 178 DTHSWDVYDPRTNN--WKLHTEPNIF--TEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHA 242 (352)
Q Consensus 178 ~~~~v~~yd~~t~~--W~~~~~~~~~--~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~ 242 (352)
..+..+|..|.+ |+.-...... .....-++.++++|+-.+..+......+..||..+.+ |+.-
T Consensus 131 --g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 131 --GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp --SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred --CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 578999998875 8754221111 1112335678988875322111122378999988764 8654
No 205
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.25 E-value=1.5 Score=38.96 Aligned_cols=174 Identities=9% Similarity=0.009 Sum_probs=89.9
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecC--CCCCcceee
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAA--PMSTARCYF 161 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~--~~~~~r~~~ 161 (352)
.++.+++ .......+..... ....+.++...++.||+... ....++++++....-..+. .+..| .
T Consensus 139 ~I~r~~~--~g~~~~~~~~~~~--~~p~glavd~~~g~lY~~d~------~~~~I~~~~~dg~~~~~l~~~~l~~P---~ 205 (386)
T 3v65_B 139 RILRANL--NGSNVEEVVSTGL--ESPGGLAVDWVHDKLYWTDS------GTSRIEVANLDGAHRKVLLWQSLEKP---R 205 (386)
T ss_dssp EEEEEET--TSCCEEEEECSSC--SCCCCEEEETTTTEEEEEET------TTTEEEECBTTSCSCEEEECSSCSCE---E
T ss_pred cEEEEec--CCCCcEEEEeCCC--CCccEEEEEeCCCeEEEEcC------CCCeEEEEeCCCCceEEeecCCCCCC---c
Confidence 4556666 5554444432210 11122222224788998853 2356788887654333222 22222 2
Q ss_pred eeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCC
Q 045821 162 PCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTD 237 (352)
Q Consensus 162 ~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~ 237 (352)
.+++- ++.||+..... ...++++++....-+.+..... ..-...++ .+++||+.-.. ...|+++|....
T Consensus 206 giavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~ 278 (386)
T 3v65_B 206 AIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGS 278 (386)
T ss_dssp EEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSSC-SCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSC
T ss_pred EEEEEcCCCeEEEeccCC-CCEEEEEeCCCCCcEEEEECCC-CCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCC
Confidence 23333 67899875422 1678999987554333321111 11122333 37899998422 237899987643
Q ss_pred ceee-cCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCC
Q 045821 238 SWLH-ADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 238 ~W~~-~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
.-.. +......+ ...++.++.||+..-..+ .|.++|..++
T Consensus 279 ~~~~~~~~~~~~P--~giav~~~~ly~td~~~~-~V~~~~~~~G 319 (386)
T 3v65_B 279 HRKAVISQGLPHP--FAITVFEDSLYWTDWHTK-SINSANKFTG 319 (386)
T ss_dssp SCEEEECSSCSSE--EEEEEETTEEEEEETTTT-EEEEEETTTC
T ss_pred eeEEEEECCCCCc--eEEEEECCEEEEeeCCCC-eEEEEECCCC
Confidence 2222 22211111 122347889999875444 8999995443
No 206
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.11 E-value=2.7 Score=41.01 Aligned_cols=178 Identities=8% Similarity=0.060 Sum_probs=95.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecC-
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE- 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~- 197 (352)
++.|++.. ...+.+||+.++++....... ...-.+...-++.|++... ..+.+||+.+++++.+..
T Consensus 73 ~g~lWigT--------~~Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~g~lWigt~----~Gl~~~~~~~~~~~~~~~~ 139 (758)
T 3ott_A 73 NTYLYMGT--------DNGILVYNYRADRYEQPETDF-PTDVRTMALQGDTLWLGAL----NGLYTYQLQSRKLTSFDTR 139 (758)
T ss_dssp TTEEEEEE--------TTEEEEEETTTTEECCCSCCC-CSCEEEEEEETTEEEEEET----TEEEEEETTTCCEEEECHH
T ss_pred CCcEEEEe--------CCCeEEEeCCCCEEECcccCC-CceEEEEEecCCcEEEEcC----CcceeEeCCCCeEEEeccC
Confidence 56777753 145789999998876521111 1111122334788888654 468999999998877621
Q ss_pred ---CCCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCC-c--EEE-E-C-CEEEEEecC
Q 045821 198 ---PNIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRG-P--AVV-V-D-DALYVLDQS 267 (352)
Q Consensus 198 ---~~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~-~--~~~-~-~-~~l~~~gg~ 267 (352)
++. ......+.- +|.|++.. . ..+.+||+.++++..+..+....... . .+. . + +.|++ |-.
T Consensus 140 ~~~l~~-~~i~~i~~d~~g~lWigt-~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-gt~ 210 (758)
T 3ott_A 140 RNGLPN-NTIYSIIRTKDNQIYVGT-Y------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-GTE 210 (758)
T ss_dssp HHCCSC-SCEEEEEECTTCCEEEEE-T------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEE-EEE
T ss_pred CCCcCC-CeEEEEEEcCCCCEEEEe-C------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEE-EEC
Confidence 111 111112222 67888842 1 14889999988887654321111111 1 222 2 2 34665 332
Q ss_pred CCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEe-CCEEEEEcCCceEEEEEcCCcc
Q 045821 268 SGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI-GKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 268 ~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
+ .+++||+.++++.....++.. ...+++.. ++.|++-. .....+||.++..
T Consensus 211 -~-Gl~~~~~~~~~~~~~~~l~~~---~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~ 262 (758)
T 3ott_A 211 -G-YLFQYFPSTGQIKQTEAFHNN---SIKSLALDGNGDLLAGT-DNGLYVYHNDTTP 262 (758)
T ss_dssp -E-EEEEEETTTTEEEEEEEEEEE---EEEEEEECTTCCEEEEE-TTEEEEECCTTSC
T ss_pred -C-CCeEEcCCCCeEEeccCCCCC---eEEEEEEcCCCCEEEEe-CCceeEEecCCCc
Confidence 2 699999999988765433221 11122222 44555543 2345556655543
No 207
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.10 E-value=1.5 Score=38.99 Aligned_cols=183 Identities=14% Similarity=0.116 Sum_probs=97.7
Q ss_pred eEEEEECCC--CeeEecCCCCCcceeeeeEEE---CCEEEEEeCCCCC-CceEEEeCCCCcEEEecCCC---Ccc-----
Q 045821 137 EVYCYDASM--NTWTDAAPMSTARCYFPCGVL---NQKIYCIGGLGDT-HSWDVYDPRTNNWKLHTEPN---IFT----- 202 (352)
Q Consensus 137 ~~~~~d~~t--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~gG~~~~-~~v~~yd~~t~~W~~~~~~~---~~~----- 202 (352)
-+++++... .+|..+........-++++.. ++.||+.+..... ..+++.+....+|+.+.... ...
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~ 111 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETG 111 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----C
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccc
Confidence 367777654 689876421222223334433 4678887642111 25777777788999886321 111
Q ss_pred ----cceeEEEE----CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCC---CC-------------CCCCCcEEEE-
Q 045821 203 ----EIEDSFVM----DGKIYIRCSASAATSHVCALVYEPSTDSWLHADAN---MA-------------SGWRGPAVVV- 257 (352)
Q Consensus 203 ----~~~~~~~~----~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~---~~-------------~~~~~~~~~~- 257 (352)
...+.++. .+.||+.+.. ..+++.+....+|+.+... +. .......+.+
T Consensus 112 ~~~~~i~~l~~~~~~~~~~l~~g~~~------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d 185 (394)
T 3b7f_A 112 RVVDHVFWLTPGHASEPGTWYAGTSP------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVD 185 (394)
T ss_dssp CCCCEEEEEEECCTTSTTCEEEEEET------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEEC
T ss_pred ccccceeEEEeCCCCCCCEEEEEecC------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEEC
Confidence 11112222 5788886421 2588888888899987421 10 0001112333
Q ss_pred ---CCEEEEEecCCCCeEEEEeCCCCceEEccCC------CCCc---CCCCceEEEe---CCEEEEEcCCceEEEEEcCC
Q 045821 258 ---DDALYVLDQSSGTKLMMWQKESREWSPVGRL------STLL---TRPPCKLVAI---GKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 258 ---~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~------~~~~---~~~~~~~~~~---~~~i~v~gG~~~~~~~d~~~ 322 (352)
.+.||+..... .+++.+....+|+.+... |... ......++.. .+.||+-. ...++..+-..
T Consensus 186 ~~~~~~l~vg~~~g--gl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-~~gl~~s~D~G 262 (394)
T 3b7f_A 186 PRDPKHLYIGMSSG--GVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN-HCGIYRMDRRE 262 (394)
T ss_dssp TTCTTCEEEEEETB--EEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-TTEEEEEETTT
T ss_pred CCCCCEEEEEECCC--CEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-CCeEEEeCCCC
Confidence 35677654332 588888889999988532 1100 0112333332 15677643 34566666667
Q ss_pred cccccc
Q 045821 323 IGNIGG 328 (352)
Q Consensus 323 ~~w~~~ 328 (352)
.+|.+.
T Consensus 263 ~tW~~~ 268 (394)
T 3b7f_A 263 GVWKRI 268 (394)
T ss_dssp TEEECG
T ss_pred CcceEC
Confidence 778653
No 208
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.07 E-value=0.026 Score=50.31 Aligned_cols=143 Identities=13% Similarity=0.108 Sum_probs=58.8
Q ss_pred EEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCC--c
Q 045821 116 EVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTN--N 191 (352)
Q Consensus 116 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~--~ 191 (352)
++.++.||+.+. ...++.+|..+++ |+.-. . ......+..++.+|+.++.+ ..+.++|..++ .
T Consensus 6 ~v~~~~v~~gs~-------dg~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d--g~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 6 TLPETLLFVSTL-------DGSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND--GSLYTLGSKNNEGL 72 (369)
T ss_dssp --CTTEEEEEET-------TSEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT--CCEEEC-----CCS
T ss_pred eeeCCEEEEEcC-------CCEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC--CEEEEEECCCCcee
Confidence 334667776543 2468999988875 76543 1 11123344567788876544 67899998765 4
Q ss_pred EEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCC--ceeecCCCCCCCCCCcEEEECCEEEEEecCCC
Q 045821 192 WKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTD--SWLHADANMASGWRGPAVVVDDALYVLDQSSG 269 (352)
Q Consensus 192 W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~ 269 (352)
|+.-...+.......+...++.||+ |+.. ..+..+|..++ .|+.-.... . ..+..++.+|+ ++..+
T Consensus 73 w~~~~~~~~~~~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-~----~~~p~~~~v~~-~~~dg 140 (369)
T 2hz6_A 73 TKLPFTIPELVQASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-D----SLSPSTSLLYL-GRTEY 140 (369)
T ss_dssp EECSCCHHHHHTTCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EEE-EEEEE
T ss_pred eeeeccCccccccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-c----cccccCCEEEE-EecCC
Confidence 6532111100011111114556654 2221 25888988765 465432210 0 01113444554 44333
Q ss_pred CeEEEEeCCCCc--eEE
Q 045821 270 TKLMMWQKESRE--WSP 284 (352)
Q Consensus 270 ~~v~~yd~~~~~--W~~ 284 (352)
.++.||+.+++ |+.
T Consensus 141 -~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 141 -TITMYDTKTRELRWNA 156 (369)
T ss_dssp -EEECCCSSSSSCCCEE
T ss_pred -EEEEEECCCCCEEEeE
Confidence 78999988654 764
No 209
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.04 E-value=1.8 Score=38.63 Aligned_cols=218 Identities=11% Similarity=0.054 Sum_probs=102.8
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceee
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYF 161 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~ 161 (352)
.++++|. .++....+-.+.. .......+.+ ++..++.|+.+ ..+.+||..+++-.........+ .
T Consensus 126 tV~lWd~--~tg~~~~~~~~~~---~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~~~~~~~~h~~~--v 192 (420)
T 4gga_A 126 SVYLWSA--SSGDILQLLQMEQ---PGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMTSHSAR--V 192 (420)
T ss_dssp EEEEEET--TTCCEEEEEECCS---TTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSC--E
T ss_pred EEEEEEC--CCCCEEEEEEecC---CCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCcEEEEEeCCCCc--e
Confidence 4566688 8887766555441 1122222322 55666677643 45888999887643222111222 2
Q ss_pred eeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCccc--ceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc-
Q 045821 162 PCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTE--IEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS- 238 (352)
Q Consensus 162 ~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~--~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~- 238 (352)
.+...++.+.+.|+.+ ..+..+|..+....... +..... ......-+++..+.|+.++ .+..+|..+.+
T Consensus 193 ~~~s~~~~~l~sgs~d--~~i~~~d~~~~~~~~~~-~~~h~~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~~~ 264 (420)
T 4gga_A 193 GSLSWNSYILSSGSRS--GHIHHHDVRVAEHHVAT-LSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEG 264 (420)
T ss_dssp EEEEEETTEEEEEETT--SEEEEEETTSSSCEEEE-EECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCCSS
T ss_pred EEEeeCCCEEEEEeCC--CceeEeeecccceeeEE-ecccccceeeeeecCCCCeeeeeeccc-----cceEEeeccccc
Confidence 2334466677777655 56777887765432211 111111 1111222556666655442 35566665433
Q ss_pred -eeecCCCCCCCCCCcEEE---ECCEEEE-EecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCC-
Q 045821 239 -WLHADANMASGWRGPAVV---VDDALYV-LDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKG- 312 (352)
Q Consensus 239 -W~~~~~~~~~~~~~~~~~---~~~~l~~-~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~- 312 (352)
+..+.........-.++. .+..++. .+|.....|.+||..++.-...-..... .........++.+++.+|.
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~--v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ--VCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC--EEEEEEETTTTEEEEEECTT
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc--eeeeeecCCCCeEEEEEecC
Confidence 111111011110111111 1344444 4554445899999988765433222110 1111122234556655553
Q ss_pred -ceEEEEEcCCcc
Q 045821 313 -CSAVVIDVGNIG 324 (352)
Q Consensus 313 -~~~~~~d~~~~~ 324 (352)
..+.+||..+..
T Consensus 343 d~~I~iwd~~~~~ 355 (420)
T 4gga_A 343 QNQLVIWKYPTMA 355 (420)
T ss_dssp TCCEEEEETTTCC
T ss_pred CCEEEEEECCCCc
Confidence 246678876543
No 210
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.93 E-value=2.6 Score=39.97 Aligned_cols=118 Identities=11% Similarity=0.099 Sum_probs=66.2
Q ss_pred CCEEEEEEecCCCCceeEEEecC-CCCCCCeeEeccCCCcc-----cCCcceEEEE--ECCE----EEEEeCCCCCCCCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDP-NSTRRSWKMIHELPART-----LRRKGMGFEV--LGKN----AYLLGGCGWSEDAT 135 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~-~~~~~~w~~~~~~~~~~-----~~~~~~~~~~--~~~~----iyv~GG~~~~~~~~ 135 (352)
++.||+.... .-.++.+|. ..-...|+.-....... +.....+.++ .++. ||+... .
T Consensus 62 ~g~vyv~~~~----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------d 130 (599)
T 1w6s_A 62 DGKMYIHTSF----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------D 130 (599)
T ss_dssp TTEEEEECST----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------T
T ss_pred CCEEEEEeCC----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------C
Confidence 8888887431 124566676 44566677654332100 0011122344 5666 877532 3
Q ss_pred CeEEEEECCCCe--eEecCCCCCc--ceeeeeEEECCEEEEEeCCCC---CCceEEEeCCCCc--EEEec
Q 045821 136 SEVYCYDASMNT--WTDAAPMSTA--RCYFPCGVLNQKIYCIGGLGD---THSWDVYDPRTNN--WKLHT 196 (352)
Q Consensus 136 ~~~~~~d~~t~~--W~~~~~~~~~--r~~~~~~~~~~~iyv~gG~~~---~~~v~~yd~~t~~--W~~~~ 196 (352)
..++.+|..|++ |+.-..-... ....+.++.++.||+-.+... ...+..||..|.+ |+.-.
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 578999998886 8743221111 223345567898887543111 1678999999875 87654
No 211
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.90 E-value=0.83 Score=40.10 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=94.0
Q ss_pred eeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceee
Q 045821 83 VCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYF 161 (352)
Q Consensus 83 ~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~ 161 (352)
..++.+|. .++.-..+.... .......... +++.+++............++.+|..+.....+..........
T Consensus 168 ~~l~~~d~--~~g~~~~l~~~~----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 168 CRLMRVDL--KTGESTVILQEN----QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCT 241 (388)
T ss_dssp EEEEEEET--TTCCEEEEEEES----SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEE
T ss_pred ceEEEEEC--CCCceEEeecCC----ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccc
Confidence 45778888 777766665432 1122223333 4443333322221123568999999887766665433211111
Q ss_pred eeEEE-CCE-EEEEeCCCCCC--ceEEEeCCCCcEEEecCCCCcc-----cceeEEEECCE-EEEEccCC----CCCCce
Q 045821 162 PCGVL-NQK-IYCIGGLGDTH--SWDVYDPRTNNWKLHTEPNIFT-----EIEDSFVMDGK-IYIRCSAS----AATSHV 227 (352)
Q Consensus 162 ~~~~~-~~~-iyv~gG~~~~~--~v~~yd~~t~~W~~~~~~~~~~-----~~~~~~~~~g~-iyv~GG~~----~~~~~~ 227 (352)
..+.. +++ |+......... .++++|+.+++-+.+...+... .......-+|+ |++. ... ......
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~-~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVD-VQDDSGYKIENDP 320 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------------CCCC
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeE-eeeccccccCCCC
Confidence 22222 454 54433222222 4999999998876664333200 00112333443 3322 110 012223
Q ss_pred EEEEEeCCCCceeecCCCCCC----------CCCCcEEEECC-EEEEEecCCC-CeEEEEeCCCCce
Q 045821 228 CALVYEPSTDSWLHADANMAS----------GWRGPAVVVDD-ALYVLDQSSG-TKLMMWQKESREW 282 (352)
Q Consensus 228 ~i~~yd~~~~~W~~~~~~~~~----------~~~~~~~~~~~-~l~~~gg~~~-~~v~~yd~~~~~W 282 (352)
.++.+|+.+++-..+...... .....+..-++ .|++.....+ ..++.+|.....|
T Consensus 321 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 321 FLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPESVW 387 (388)
T ss_dssp EEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGGGG
T ss_pred EEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChhcc
Confidence 688999988877666432210 11222344455 4555544333 5789989887666
No 212
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=94.90 E-value=1.1 Score=35.63 Aligned_cols=147 Identities=7% Similarity=0.071 Sum_probs=80.3
Q ss_pred eeEEECCEEEEEeCCCCCCceEEEeCCCC--cEE--EecC-CCC-cccceeEEEE--CCEEEEEccCCCCCCceEEEEEe
Q 045821 162 PCGVLNQKIYCIGGLGDTHSWDVYDPRTN--NWK--LHTE-PNI-FTEIEDSFVM--DGKIYIRCSASAATSHVCALVYE 233 (352)
Q Consensus 162 ~~~~~~~~iyv~gG~~~~~~v~~yd~~t~--~W~--~~~~-~~~-~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd 233 (352)
+++.+++++|++-| ..+++++.... ... .|.. .+. +...-++... ++++|++-|.. .|+|+
T Consensus 11 Ai~~~~g~~yfFkg----~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~IDAa~~~~~~~~~yfFkG~~-------yw~~~ 79 (195)
T 1itv_A 11 AIAEIGNQLYLFKD----GKYWRFSEGRGSRPQGPFLIADKWPALPRKLDSVFEEPLSKKLFFFSGRQ-------VWVYT 79 (195)
T ss_dssp EEEEETTEEEEEET----TEEEEECCSSSCCCEEEEEHHHHCTTSCSSCSEEEECTTTCCEEEEETTE-------EEEEE
T ss_pred EEEEeCCEEEEEEC----CEEEEEECCccccCCCcEEhhhccCCCCCCccEEEEECCCCeEEEEeCCE-------EEEEc
Confidence 45567999999999 77899987652 222 1211 111 1122233333 68899996544 78887
Q ss_pred CCCCce-eecCC-CCCC-CCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEE-----cc-CCCCCcCCCCceEEEe
Q 045821 234 PSTDSW-LHADA-NMAS-GWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSP-----VG-RLSTLLTRPPCKLVAI 302 (352)
Q Consensus 234 ~~~~~W-~~~~~-~~~~-~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~-----~~-~~~~~~~~~~~~~~~~ 302 (352)
..+..- +.+.. ..+. ...--++. .++++|++-|. ..++||..+++-.. +. ..+. .+...-++...
T Consensus 80 ~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~---~ywr~d~~~~~~~~gyPr~i~~~w~G-vp~~idaa~~~ 155 (195)
T 1itv_A 80 GASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR---RLWRFDVKAQMVDPRSASEVDRMFPG-VPLDTHDVFQF 155 (195)
T ss_dssp TTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT---EEEEEETTTTEECGGGCEEHHHHSTT-SCSSCSEEEEE
T ss_pred CCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC---EEEEEeCCcccccCCCccChhhcCCC-CCCCCCEEEEe
Confidence 542111 01111 0111 01112332 36899999875 89999988754221 11 1111 11222344455
Q ss_pred CCEEEEEcCCceEEEEEcCCcc
Q 045821 303 GKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 303 ~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
++.+|.+-|. ..+-||..+..
T Consensus 156 ~g~~Yffkg~-~y~~~~~~~~~ 176 (195)
T 1itv_A 156 REKAYFCQDR-FYWRVSSRSEL 176 (195)
T ss_dssp TTEEEEEETT-EEEEEECCTTC
T ss_pred CCeEEEEeCC-EEEEEECCccE
Confidence 7999999876 46668877654
No 213
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.84 E-value=1.7 Score=37.30 Aligned_cols=198 Identities=11% Similarity=-0.032 Sum_probs=98.7
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCC-----------CCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWS-----------EDA 134 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~-----------~~~ 134 (352)
++.||+.... . .++.+|+ .++..+.+...........-..++.- ++.+|+....... ...
T Consensus 91 ~g~l~v~d~~---~--~i~~~d~--~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 91 NNQLYIVDCY---Y--HLSVVGS--EGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp TTEEEEEETT---T--EEEEECT--TCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred CCcEEEEECC---C--CEEEEeC--CCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCC
Confidence 5678876322 1 2677888 76655555322110001111223332 5678887432100 012
Q ss_pred CCeEEEEECCCCeeEecCC-CCCcceeeeeEEE-CC-EEEEEeCCCCCCceEEEeCCCC---cEEEecCCCCcccceeEE
Q 045821 135 TSEVYCYDASMNTWTDAAP-MSTARCYFPCGVL-NQ-KIYCIGGLGDTHSWDVYDPRTN---NWKLHTEPNIFTEIEDSF 208 (352)
Q Consensus 135 ~~~~~~~d~~t~~W~~~~~-~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~---~W~~~~~~~~~~~~~~~~ 208 (352)
...+++||+.+++...+.. +..| ..++.- ++ .+|+.-... ..+.+|+..+. ..+.+..++. .. ..++
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~~~--~~I~~~~~~~~~~~~~~~~~~~~g-P~-gi~~ 236 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVP---GGAEVSADSSFVLVAEFLS--HQIVKYWLEGPKKGTAEVLVKIPN-PG-NIKR 236 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEGGG--TEEEEEESSSTTTTCEEEEEECSS-EE-EEEE
T ss_pred CceEEEEeCCCCEEEEeccCCccC---cceEECCCCCEEEEEeCCC--CeEEEEECCCCcCCccceEEeCCC-CC-CeEE
Confidence 3579999998887654321 1111 122332 33 588874322 67899998752 4444332222 11 1122
Q ss_pred EECCEEEEEccCCCC-----CCceEEEEEeCCCCceeecCCCCCC--CCCCcEEEECCEEEEEecCCCCeEEEEeCCCC
Q 045821 209 VMDGKIYIRCSASAA-----TSHVCALVYEPSTDSWLHADANMAS--GWRGPAVVVDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 209 ~~~g~iyv~GG~~~~-----~~~~~i~~yd~~~~~W~~~~~~~~~--~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
--+|+||+....... .....+.+||+....-..+..+... ......+..++.||+.+...+ .|.+|++..+
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~-~i~~~~~~~~ 314 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHG-SVGILVYDKK 314 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCS-EEEEEEC---
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCC-ceEEEecccc
Confidence 236789998532100 1124688999875555555332111 111223346889888764443 8999987643
No 214
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.82 E-value=1.7 Score=42.00 Aligned_cols=56 Identities=13% Similarity=-0.014 Sum_probs=32.1
Q ss_pred CeEEEEECCCC---eeEecCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 136 SEVYCYDASMN---TWTDAAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 136 ~~~~~~d~~t~---~W~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
..++++|..++ +-..+...... . ...+. -+++..+++.. ..++++|..++....+.
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~~-~-~~~~~SPDG~~la~~~~---~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEGF-A-TDAKLSPKGGFVSFIRG---RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSSC-E-EEEEECTTSSEEEEEET---TEEEEEETTTTEEEECC
T ss_pred CcEEEEECCCCCcceEEEcccCCcc-c-ccccCCCCCCEEEEEeC---CcEEEEecCCCCEEEec
Confidence 68999999887 54444332211 1 11111 15543333331 57899999988776664
No 215
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.72 E-value=1.3 Score=35.59 Aligned_cols=147 Identities=6% Similarity=-0.019 Sum_probs=80.9
Q ss_pred eeEEECCEEEEEeCCCCCCceEEEeCCCCcEEE--ecC-CCC-cccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCC
Q 045821 162 PCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKL--HTE-PNI-FTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPS 235 (352)
Q Consensus 162 ~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~--~~~-~~~-~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~ 235 (352)
+++.+++.+|++-| ..+++++.....+.. |.. .+. +...-++... ++++|++-|.. +|+|+..
T Consensus 28 Ai~~~~g~~y~Fkg----~~~wr~~~~~~~~~p~~I~~~wp~Lp~~iDAa~~~~~~~~iyfFkG~~-------~w~~~~~ 96 (207)
T 1pex_A 28 AITSLRGETMIFKD----RFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRK-------FWALNGY 96 (207)
T ss_dssp EEEEETTEEEEEET----TEEEEECSSSSCCEEEEHHHHCTTSCSSCCEEEEETTTTEEEEEETTE-------EEEESTT
T ss_pred EEEeCCCcEEEEEC----CEEEEEeCCCcCCCceehhHhccCCCCCccEEEEeccCCcEEEEccCE-------EEEEeCC
Confidence 45557999999998 678888876544322 211 111 1122234444 58999996544 7888643
Q ss_pred CCce---eecCCC-CCCC--CCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEE-----cc-CCCCCcCCCCceEEE
Q 045821 236 TDSW---LHADAN-MASG--WRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSP-----VG-RLSTLLTRPPCKLVA 301 (352)
Q Consensus 236 ~~~W---~~~~~~-~~~~--~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~-----~~-~~~~~~~~~~~~~~~ 301 (352)
+-.- ..+... .+.. .--+++.. ++++|++-|. ..|+||..+++-.. +. ..+. .+...-+++.
T Consensus 97 ~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~---~ywr~d~~~~~~d~gyPr~i~~~~~G-ip~~iDaAf~ 172 (207)
T 1pex_A 97 DILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN---QVWRYDDTNHIMDKDYPRLIEEDFPG-IGDKVDAVYE 172 (207)
T ss_dssp CCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT---EEEEEETTTTEECSSCCCBHHHHSTT-SCSCCSEEEE
T ss_pred eeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC---EEEEEeCcCccccCCCCccHHHcCCC-CCCCccEEEE
Confidence 2111 112110 1110 11123332 4899999886 89999987654221 11 0111 1122234445
Q ss_pred eCCEEEEEcCCceEEEEEcCCcc
Q 045821 302 IGKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 302 ~~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
.++++|+|-|. ..+-||..+.+
T Consensus 173 ~~g~~YfFkg~-~y~rf~~~~~~ 194 (207)
T 1pex_A 173 KNGYIYFFNGP-IQFEYSIWSNR 194 (207)
T ss_dssp ETTEEEEEETT-EEEEEETTTTE
T ss_pred cCCcEEEEECC-EEEEEeCCccE
Confidence 69999999876 56678887654
No 216
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.67 E-value=0.93 Score=38.56 Aligned_cols=190 Identities=6% Similarity=0.047 Sum_probs=90.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCC--eeEecCCCCCcceee-eeEEE---CCEEEEEeCCCCCCceEEEeCCCC--
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMN--TWTDAAPMSTARCYF-PCGVL---NQKIYCIGGLGDTHSWDVYDPRTN-- 190 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~--~W~~~~~~~~~r~~~-~~~~~---~~~iyv~gG~~~~~~v~~yd~~t~-- 190 (352)
++.+++.|+. ...+.+||..++ .+..+..+......- +++.. ++.+++.|+.+ ..+.+||..+.
T Consensus 22 ~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d--g~v~vwd~~~~~~ 93 (351)
T 3f3f_A 22 YGRHVATCSS------DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD--KTVKLWEEDPDQE 93 (351)
T ss_dssp SSSEEEEEET------TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT--SCEEEEEECTTSC
T ss_pred CCCEEEEeeC------CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC--CeEEEEecCCCcc
Confidence 4445555553 245677777644 233332221111111 22222 36677777765 57888888764
Q ss_pred -----cEEEecCCCCcccceeEEEE--C--CEEEEEccCCCCCCceEEEEEeCCCCc----eeec------CCCCCCCCC
Q 045821 191 -----NWKLHTEPNIFTEIEDSFVM--D--GKIYIRCSASAATSHVCALVYEPSTDS----WLHA------DANMASGWR 251 (352)
Q Consensus 191 -----~W~~~~~~~~~~~~~~~~~~--~--g~iyv~GG~~~~~~~~~i~~yd~~~~~----W~~~------~~~~~~~~~ 251 (352)
.|+.+............+.+ + +.+++.|+.++ .+..||..+.+ |... ...+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (351)
T 3f3f_A 94 ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQ 168 (351)
T ss_dssp TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSC
T ss_pred cccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChHHhccccccccccccccccCCccc
Confidence 33433322221111122222 3 66666665442 57788876543 2210 000111111
Q ss_pred Cc-EEEE-----CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE-eCC----EEEEEcCCce-EEEEE
Q 045821 252 GP-AVVV-----DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA-IGK----TIFVIGKGCS-AVVID 319 (352)
Q Consensus 252 ~~-~~~~-----~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~----~i~v~gG~~~-~~~~d 319 (352)
.. .+.. ++.++++++..+ .+..++...+....+..+... .....++.. .++ .+++.|+.+. +.+||
T Consensus 169 ~~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 169 SDFCLSWCPSRFSPEKLAVSALEQ-AIIYQRGKDGKLHVAAKLPGH-KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp CCEEEEECCCSSSCCEEEEEETTE-EEEEEECTTSCEEEEEECCCC-CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEE
T ss_pred ceeEEEeccCCCCCcEEEEecCCC-cEEEEccCCCceeeeeecCCC-CcceeEEEECCCCCCcceEEEEEcCCCeEEEEe
Confidence 11 1222 366777777665 566667667766555444321 111223332 233 6777776654 66788
Q ss_pred cCCc
Q 045821 320 VGNI 323 (352)
Q Consensus 320 ~~~~ 323 (352)
+...
T Consensus 247 ~~~~ 250 (351)
T 3f3f_A 247 ITEK 250 (351)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 8764
No 217
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.62 E-value=2.1 Score=37.48 Aligned_cols=148 Identities=5% Similarity=-0.095 Sum_probs=74.6
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCC--CcceeeeeEEECCEEEEEeCCCCC--CceEEEeCCCCcEEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMS--TARCYFPCGVLNQKIYCIGGLGDT--HSWDVYDPRTNNWKL 194 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~--~~r~~~~~~~~~~~iyv~gG~~~~--~~v~~yd~~t~~W~~ 194 (352)
++++++.++ .+.+.+++..+++........ ..........-++..++.++.+.. ..+..+|........
T Consensus 187 dg~~l~s~s-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~ 259 (365)
T 4h5i_A 187 DGKVVAYIT-------GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV 259 (365)
T ss_dssp TSSEEEEEC-------SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE
T ss_pred CCceEEecc-------ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc
Confidence 555555554 234677777776543322221 111112222237777777765543 345667766655433
Q ss_pred ecC--CCCcccc--eeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCCCCCCCcEEEECCEEEEEecCCC
Q 045821 195 HTE--PNIFTEI--EDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMASGWRGPAVVVDDALYVLDQSSG 269 (352)
Q Consensus 195 ~~~--~~~~~~~--~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~l~~~gg~~~ 269 (352)
... ....... ..++.-+|++.+.|+.++ .|..||..+.+-.. +.......-...++.-++++++.|+.++
T Consensus 260 ~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 260 LRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred eeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 221 1111111 112223788888876653 48888987765322 2111111101111223788888787766
Q ss_pred CeEEEEeCCC
Q 045821 270 TKLMMWQKES 279 (352)
Q Consensus 270 ~~v~~yd~~~ 279 (352)
.|.+||...
T Consensus 335 -tvrvw~ip~ 343 (365)
T 4h5i_A 335 -TIHIIKLPL 343 (365)
T ss_dssp -EEEEEECCT
T ss_pred -eEEEEEcCC
Confidence 899998753
No 218
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.48 E-value=2.1 Score=36.82 Aligned_cols=198 Identities=9% Similarity=0.050 Sum_probs=102.1
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCC--CeeEeccCCC----cccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRR--SWKMIHELPA----RTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVY 139 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~--~w~~~~~~~~----~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 139 (352)
++.||+.... ...+..||+ ... .-..+..... ......-..++.. ++.+|+..++ ....+.
T Consensus 101 ~g~l~v~d~~----~~~v~~~~~--~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~-----~~~~I~ 169 (329)
T 3fvz_A 101 DGNYWVTDVA----LHQVFKLDP--HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY-----CNSRIV 169 (329)
T ss_dssp TSCEEEEETT----TTEEEEECT--TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS-----SCCEEE
T ss_pred CCCEEEEECC----CCEEEEEeC--CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC-----CCCeEE
Confidence 5567776432 235667787 544 3333332110 0001112334443 5789998752 235688
Q ss_pred EEECCCCeeEecCCCC-------Ccce-eeeeEEE-C-CEEEEEeCCCCCCceEEEeCCCCcEEEecCCC-CcccceeEE
Q 045821 140 CYDASMNTWTDAAPMS-------TARC-YFPCGVL-N-QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPN-IFTEIEDSF 208 (352)
Q Consensus 140 ~~d~~t~~W~~~~~~~-------~~r~-~~~~~~~-~-~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~-~~~~~~~~~ 208 (352)
+||+....-..+.... .... ...+++- + +.+||..... ..+.+||+.+++....-..+ ......+.+
T Consensus 170 ~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~--~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 170 QFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN--GRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT--TEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC--CEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 8986554433332111 1111 2333433 4 8999987654 68999999977664432111 111112233
Q ss_pred EECCEEEEEccCCC--CCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCC
Q 045821 209 VMDGKIYIRCSASA--ATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKES 279 (352)
Q Consensus 209 ~~~g~iyv~GG~~~--~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~ 279 (352)
...+.+|...|... ......+..+|..+++.... ............+. -+|.||+.....+ .|.+|+++.
T Consensus 248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~-~I~~~~~~~ 322 (329)
T 3fvz_A 248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN-TVWKFTLTE 322 (329)
T ss_dssp EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC-CEEEEEEEE
T ss_pred ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC-EEEEEeCCc
Confidence 34467777655432 11223688899877766543 21111111112233 3678888876555 899988754
No 219
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.47 E-value=0.81 Score=41.21 Aligned_cols=141 Identities=8% Similarity=0.044 Sum_probs=67.6
Q ss_pred EEEEeCCCCCCceEEEeCCCC---cEEEec--CCCCccc-ceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCc-ee
Q 045821 170 IYCIGGLGDTHSWDVYDPRTN---NWKLHT--EPNIFTE-IEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDS-WL 240 (352)
Q Consensus 170 iyv~gG~~~~~~v~~yd~~t~---~W~~~~--~~~~~~~-~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~-W~ 240 (352)
+++.|+.+ ..+.+||..+. .+...+ ....... -..+... ++.+++.|+..+ .+..||..+.. ..
T Consensus 196 ~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 196 YLLSASDD--HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ-----KLMIWDTRNNNTSK 268 (430)
T ss_dssp EEEEECTT--SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCSCSSS
T ss_pred eEEEEeCC--CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC-----eEEEEECCCCCCCc
Confidence 66666655 67889998873 222111 0111111 1122222 566777765542 68889987652 11
Q ss_pred ecCCCCCCCCCCcEEEE--CC-EEEEEecCCCCeEEEEeCCCCc--eEEccCCCCCcCCCCceEEE--eCCEEEEEcCCc
Q 045821 241 HADANMASGWRGPAVVV--DD-ALYVLDQSSGTKLMMWQKESRE--WSPVGRLSTLLTRPPCKLVA--IGKTIFVIGKGC 313 (352)
Q Consensus 241 ~~~~~~~~~~~~~~~~~--~~-~l~~~gg~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~ 313 (352)
.+.....+......+.+ ++ .+++.|+.++ .|.+||..+.. -..+.... ....++.. .+..+++.|+.+
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg-~v~vwd~~~~~~~~~~~~~h~----~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSADK-TVALWDLRNLKLKLHSFESHK----DEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEETTS-EEEEEETTCTTSCSEEEECCS----SCEEEEEECSSCTTEEEEEETT
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC-eEEEEeCCCCCCCeEEeecCC----CCEEEEEECCCCCCEEEEEeCC
Confidence 11100011111112222 33 4788888776 89999988632 11111111 11112222 233566666544
Q ss_pred -eEEEEEcCC
Q 045821 314 -SAVVIDVGN 322 (352)
Q Consensus 314 -~~~~~d~~~ 322 (352)
.+.+||+..
T Consensus 344 ~~i~iwd~~~ 353 (430)
T 2xyi_A 344 RRLHVWDLSK 353 (430)
T ss_dssp SCCEEEEGGG
T ss_pred CcEEEEeCCC
Confidence 566899876
No 220
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.43 E-value=2.2 Score=36.80 Aligned_cols=151 Identities=6% Similarity=0.020 Sum_probs=75.1
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.|+.+ ..+.+||..+++-..+........-.+++.. ++.+++.|+.+ ..+.+||..+..-... .
T Consensus 138 ~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d--g~i~iwd~~~~~~~~~-~ 208 (343)
T 3lrv_A 138 NTEYFIWADNR------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD--GILDVYNLSSPDQASS-R 208 (343)
T ss_dssp -CCEEEEEETT------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT--SCEEEEESSCTTSCCE-E
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC--CEEEEEECCCCCCCcc-E
Confidence 34566666643 4578899888765333222211111122222 67787877765 7899999998753200 1
Q ss_pred CCCcccc-eeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCcee-ecCCCCCC--CCCCcEEE--ECCEEEEEecCCC
Q 045821 198 PNIFTEI-EDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWL-HADANMAS--GWRGPAVV--VDDALYVLDQSSG 269 (352)
Q Consensus 198 ~~~~~~~-~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~-~~~~~~~~--~~~~~~~~--~~~~l~~~gg~~~ 269 (352)
+...+.. ...+.+ +++..+.|+ .. .+..||..+.+-. .+...... ......+. .+++.++.++..+
T Consensus 209 ~~~~h~~~v~~l~fs~~g~~l~s~~-~~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d 282 (343)
T 3lrv_A 209 FPVDEEAKIKEVKFADNGYWMVVEC-DQ-----TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNES 282 (343)
T ss_dssp CCCCTTSCEEEEEECTTSSEEEEEE-SS-----BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTT
T ss_pred EeccCCCCEEEEEEeCCCCEEEEEe-CC-----eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCC
Confidence 1111111 122222 666666655 21 5788888765421 12110000 11111222 3566666654422
Q ss_pred CeEEEEeC--CCCceEE
Q 045821 270 TKLMMWQK--ESREWSP 284 (352)
Q Consensus 270 ~~v~~yd~--~~~~W~~ 284 (352)
..+.+|+. ..+.|..
T Consensus 283 ~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 283 NSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TEEEEEEECTTTCSEEE
T ss_pred CcEEEEEEcccccceEe
Confidence 26766665 5677987
No 221
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=94.36 E-value=0.86 Score=37.27 Aligned_cols=139 Identities=9% Similarity=0.035 Sum_probs=76.0
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEEC---------------CCCeeEecCCCCCcceeeeeEE--ECCEEEEEeCCCCCC
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDA---------------SMNTWTDAAPMSTARCYFPCGV--LNQKIYCIGGLGDTH 180 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~---------------~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~ 180 (352)
..+++|+|-| ..+|+++. .+..|..++..+.......++. .++++|++-| +
T Consensus 12 ~~ge~~fFk~--------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg----~ 79 (225)
T 3oyo_A 12 SEYEVYFFAK--------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG----N 79 (225)
T ss_dssp STTEEEEEET--------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET----T
T ss_pred CCCEEEEEEC--------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC----C
Confidence 3788999976 34666661 1222333332111112233333 4799999999 7
Q ss_pred ceEEEeCCCC----cEEE----ec----CCCCc--c-cceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecC
Q 045821 181 SWDVYDPRTN----NWKL----HT----EPNIF--T-EIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHAD 243 (352)
Q Consensus 181 ~v~~yd~~t~----~W~~----~~----~~~~~--~-~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~ 243 (352)
.+++||..++ .-.. |. .+|.. . ..-++.. .++++|.+-|.. .|+||..+++...-+
T Consensus 80 ~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~~-------yw~~d~~~~~~~~gP 152 (225)
T 3oyo_A 80 HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGNK-------YVRIAYDSKQLVGNI 152 (225)
T ss_dssp EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETTE-------EEEEETTTTEEEEEE
T ss_pred EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCCe-------EEEEECCCCeecCCC
Confidence 8899976432 2111 11 11211 0 1223333 268999996544 899997766544311
Q ss_pred C-----CCCC-----CCCC-cEEE--ECCEEEEEecCCCCeEEEEeCC
Q 045821 244 A-----NMAS-----GWRG-PAVV--VDDALYVLDQSSGTKLMMWQKE 278 (352)
Q Consensus 244 ~-----~~~~-----~~~~-~~~~--~~~~l~~~gg~~~~~v~~yd~~ 278 (352)
. .+.. ...- +++. .++++|++-|. ..|+||..
T Consensus 153 k~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~---~ywr~d~~ 197 (225)
T 3oyo_A 153 RNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ---NYVRIDFT 197 (225)
T ss_dssp EEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT---EEEEEECC
T ss_pred cchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC---EEEEEeCC
Confidence 0 0110 1112 2333 37899999886 89999998
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.35 E-value=2.1 Score=36.31 Aligned_cols=155 Identities=10% Similarity=-0.001 Sum_probs=78.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCc-c--eeeeeEEE-CCEEEEE----eCCC-----------CC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTA-R--CYFPCGVL-NQKIYCI----GGLG-----------DT 179 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~-r--~~~~~~~~-~~~iyv~----gG~~-----------~~ 179 (352)
++.+|+... ....+.+||+. ++.+.+...... + .-..++.- ++.+|+. |... ..
T Consensus 96 dG~l~v~~~------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 96 QQRLVHCEH------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp TSCEEEEET------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred CCCEEEEEC------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCC
Confidence 567777642 12468888886 555554332111 1 11123332 6788885 3211 01
Q ss_pred CceEEEeCCCCcEEEecCCCCcccceeEEE-ECC-EEEEEccCCCCCCceEEEEEeCCCCceee---cCCCCCCCCCCcE
Q 045821 180 HSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDG-KIYIRCSASAATSHVCALVYEPSTDSWLH---ADANMASGWRGPA 254 (352)
Q Consensus 180 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W~~---~~~~~~~~~~~~~ 254 (352)
..+++||+.+++.+.+. .. ......+. -++ .||+............+++||...+.... +.......-.+..
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~-~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~ 245 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL-DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFC 245 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE-SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEE
T ss_pred CeEEEEcCCCCcEEEEe--cC-CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEE
Confidence 56899999888877664 11 11122222 245 48887432111112468888876544221 1111111111222
Q ss_pred EEECCEEEEEecCCCCeEEEEeCCCCceEEcc
Q 045821 255 VVVDDALYVLDQSSGTKLMMWQKESREWSPVG 286 (352)
Q Consensus 255 ~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~ 286 (352)
+..+|.||+..+ ..|++||++......+.
T Consensus 246 ~d~~G~lwv~~~---~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 246 VDRGGWLWSSSG---TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp ECTTSCEEECCS---SEEEEECTTSCEEEEEE
T ss_pred ECCCCCEEEecC---CcEEEECCCCCEEEEEE
Confidence 334677776652 26999999876665554
No 223
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.31 E-value=2.5 Score=36.96 Aligned_cols=184 Identities=10% Similarity=0.020 Sum_probs=97.6
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEE--ECCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEV--LGKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.||..-. ....++.+++ .......+.... . ..-..+++ .++.||+... ....++++++..
T Consensus 84 ~~~ly~~D~----~~~~I~r~~~--~g~~~~~~~~~~---~-~~p~glavd~~~g~ly~~d~------~~~~I~~~~~dG 147 (349)
T 3v64_C 84 RELVFWSDV----TLDRILRANL--NGSNVEEVVSTG---L-ESPGGLAVDWVHDKLYWTDS------GTSRIEVANLDG 147 (349)
T ss_dssp TTEEEEEET----TTTEEEEEET--TSCSCEEEECSS---C-SCCCEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred ccEEEEEec----cCCceEEEec--CCCCceEEEeCC---C-CCccEEEEecCCCeEEEEcC------CCCeEEEEcCCC
Confidence 566776621 2234666777 555544443221 0 11123333 4789998853 245788888876
Q ss_pred CeeEecC--CCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEcc
Q 045821 146 NTWTDAA--PMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCS 219 (352)
Q Consensus 146 ~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG 219 (352)
..-..+. .+..|+ .+++- ++.||+..... ...++++++....-+.+.... ...-.+.++ .+++||+.-.
T Consensus 148 ~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 148 AHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp CSCEEEECTTCSCEE---EEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEESCCSS-CSCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEeCCCCCcc---eEEEecCcCeEEEeccCC-CCEEEEEeCCCCCcEEEEECC-CCCcceEEEeCCCCEEEEEEC
Confidence 5433322 222332 23333 68899886432 267899988765433332111 111123333 3789999842
Q ss_pred CCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCC
Q 045821 220 ASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 220 ~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
. ...|+++|.....=..+ ......+ ...++.++.||+..-..+ .|.++|..++
T Consensus 223 ~-----~~~I~~~~~dG~~~~~~~~~~~~~P--~giav~~~~ly~td~~~~-~V~~~~~~~G 276 (349)
T 3v64_C 223 K-----HHVIERANLDGSHRKAVISQGLPHP--FAITVFEDSLYWTDWHTK-SINSANKFTG 276 (349)
T ss_dssp T-----TTEEEEEETTSCSCEEEECSSCSSE--EEEEEETTEEEEEETTTT-EEEEEETTTC
T ss_pred C-----CCEEEEEeCCCCceEEEEeCCCCCc--eEEEEECCEEEEecCCCC-eEEEEEccCC
Confidence 2 23788998764332222 2111111 122347899999875544 8999995444
No 224
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=94.21 E-value=1 Score=35.92 Aligned_cols=143 Identities=9% Similarity=0.092 Sum_probs=76.3
Q ss_pred eeEEECCEEEEEeCCCCCCceEEEeCCCC--c-EEEec----CCCCcccceeEEE-ECCEEEEEccCCCCCCceEEEEEe
Q 045821 162 PCGVLNQKIYCIGGLGDTHSWDVYDPRTN--N-WKLHT----EPNIFTEIEDSFV-MDGKIYIRCSASAATSHVCALVYE 233 (352)
Q Consensus 162 ~~~~~~~~iyv~gG~~~~~~v~~yd~~t~--~-W~~~~----~~~~~~~~~~~~~-~~g~iyv~GG~~~~~~~~~i~~yd 233 (352)
+++.+++++|++-| ..+++++...- . =+.|. .+|. ..-++.. .+|++|.+-|.. .|+|+
T Consensus 10 A~~~~~g~~~fFkg----~~~w~~~~~~~~~gyP~~I~~~w~glP~--~iDAa~~~~~g~~yfFkg~~-------yw~~~ 76 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE----RWFWRVRNNQVMDGYPMPIGQFWRGLPA--SINTAYERKDGKFVFFKGDK-------HWVFD 76 (196)
T ss_dssp EEEEETTEEEEEET----TEEEEEETTEECTTCSEEHHHHSTTCCS--SCCEEEECTTSCEEEEETTE-------EEEEE
T ss_pred EEEEcCCEEEEEEC----CEEEEEECCccCCCCceEhhHhccCCCC--CccEEEEeCCCcEEEecCCE-------EEEEe
Confidence 34467899999998 77888864320 0 01221 1222 1222322 378899985543 78887
Q ss_pred CCCCce---eecCCC---CCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEE-----cc---CCCCCcCCCCc
Q 045821 234 PSTDSW---LHADAN---MASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSP-----VG---RLSTLLTRPPC 297 (352)
Q Consensus 234 ~~~~~W---~~~~~~---~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~-----~~---~~~~~~~~~~~ 297 (352)
..+... ..+... .+...--+++.. ++++|++-|. ..++||..+++-.. +. .+|. ....
T Consensus 77 ~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~---~yw~yd~~~~~v~~gyPk~i~~~~gip~---~ida 150 (196)
T 3c7x_A 77 EASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN---KYYRFNEELRAVDSEYPKNIKVWEGIPE---SPRG 150 (196)
T ss_dssp TTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETT---EEEEEETTTTEECTTCSEEGGGSBTCCS---SCSE
T ss_pred CCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECC---EEEEEeCCcccccCCCCccHHHCCCcCC---Ccce
Confidence 542111 011110 111112223332 6899999876 89999987754321 11 1221 1122
Q ss_pred eEEEeCC-EEEEEcCCceEEEEEcCCcc
Q 045821 298 KLVAIGK-TIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 298 ~~~~~~~-~i~v~gG~~~~~~~d~~~~~ 324 (352)
++...++ ++|++-|. ..+-||..+.+
T Consensus 151 Af~~~~~~~~YfFkg~-~y~r~d~~~~~ 177 (196)
T 3c7x_A 151 SFMGSDEVFTYFYKGN-KYWKFNNQKLK 177 (196)
T ss_dssp EEECTTSSEEEEEETT-EEEEEETTTTE
T ss_pred eEEecCCCEEEEEECC-EEEEEECCcce
Confidence 3333244 99999875 46668887654
No 225
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.21 E-value=4.2 Score=39.15 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=67.1
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcc-----cCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPART-----LRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYD 142 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~-----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d 142 (352)
++.||+.... -.++.+|..+-...|+.-...+... +.....+.++.++.||+... ...++.+|
T Consensus 66 ~g~vyv~~~~-----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD 133 (668)
T 1kv9_A 66 DGVIYTSMSW-----SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALD 133 (668)
T ss_dssp TTEEEEEEGG-----GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEE
T ss_pred CCEEEEECCC-----CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEE
Confidence 7888876432 2567778722334576544332100 00112234556888887632 35789999
Q ss_pred CCCCe--eEecCCCCC--cceeeeeEEECCEEEEEeCCCC---CCceEEEeCCCCc--EEEe
Q 045821 143 ASMNT--WTDAAPMST--ARCYFPCGVLNQKIYCIGGLGD---THSWDVYDPRTNN--WKLH 195 (352)
Q Consensus 143 ~~t~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~gG~~~---~~~v~~yd~~t~~--W~~~ 195 (352)
..|++ |+.-..-+. .....+.++.++.+|+..+... ...+..||..|++ |+.-
T Consensus 134 ~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 134 AKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 99886 875432111 1223345667899888543211 1679999999875 8764
No 226
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.11 E-value=2.8 Score=36.82 Aligned_cols=146 Identities=10% Similarity=0.133 Sum_probs=76.0
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCC-e-eEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMN-T-WTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~-~-W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
++.+++.|+.+ ..+.+||.... + -..+.....+ . .+++.. ++..++.|+.+ ..+.+||..+..-...
T Consensus 217 ~~~~l~sgs~D------~~v~~wd~~~~~~~~~~~~~h~~~-v-~~v~~~p~~~~l~s~s~D--~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 217 NANMFISGSCD------TTVRLWDLRITSRAVRTYHGHEGD-I-NSVKFFPDGQRFGTGSDD--GTCRLFDMRTGHQLQV 286 (380)
T ss_dssp SCCEEEEEETT------SCEEEEETTTTCCCCEEECCCSSC-C-CEEEECTTSSEEEEECSS--SCEEEEETTTTEEEEE
T ss_pred CCCEEEEEECC------CeEEEEECCCCCcceEEECCcCCC-e-EEEEEecCCCeEEEEcCC--CeEEEEECCCCcEEEE
Confidence 55677777653 34778887632 1 1111111110 1 112222 56677777766 6789999988754332
Q ss_pred cCCCCcc-------cceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCC-CC--CCCcEEEECCEEEEE
Q 045821 196 TEPNIFT-------EIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMA-SG--WRGPAVVVDDALYVL 264 (352)
Q Consensus 196 ~~~~~~~-------~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~-~~--~~~~~~~~~~~l~~~ 264 (352)
-...... ....+..-+|++.+.|+.++ .+..||..+.+-.. +..... +. ....++..+++.++.
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-----~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG-----DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS-----CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCC-----CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 2111110 11122334777777765443 57888887665432 221111 11 111123347778888
Q ss_pred ecCCCCeEEEEeCCCC
Q 045821 265 DQSSGTKLMMWQKESR 280 (352)
Q Consensus 265 gg~~~~~v~~yd~~~~ 280 (352)
|+.++ .+.+||....
T Consensus 362 gs~D~-~i~iW~~~~~ 376 (380)
T 3iz6_a 362 GSWDK-NLKIWAFSGH 376 (380)
T ss_dssp ECTTS-CEEEEECCSS
T ss_pred eeCCC-CEEEEecCCC
Confidence 88776 8888887653
No 227
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=94.07 E-value=1.3 Score=36.22 Aligned_cols=147 Identities=13% Similarity=0.115 Sum_probs=78.7
Q ss_pred CCEEEEEeCCCCCCceEEEeC------CCCcEEE--ec----CCCCc----ccceeEEE-ECCEEEEEccCCCCCCceEE
Q 045821 167 NQKIYCIGGLGDTHSWDVYDP------RTNNWKL--HT----EPNIF----TEIEDSFV-MDGKIYIRCSASAATSHVCA 229 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~------~t~~W~~--~~----~~~~~----~~~~~~~~-~~g~iyv~GG~~~~~~~~~i 229 (352)
++.+|++-| ..+++++. ....... |. .+|.. ...-++.. .+|++|++-|.. .
T Consensus 13 ~ge~~fFk~----~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg~~-------~ 81 (225)
T 3oyo_A 13 EYEVYFFAK----NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSGNH-------S 81 (225)
T ss_dssp TTEEEEEET----TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEETTE-------E
T ss_pred CCEEEEEEC----CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcCCE-------E
Confidence 689999988 67888872 1111111 11 12211 11223333 489999996543 8
Q ss_pred EEEeCCC----Cc-----------eeecCCCCCCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEE----cc-C
Q 045821 230 LVYEPST----DS-----------WLHADANMASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSP----VG-R 287 (352)
Q Consensus 230 ~~yd~~~----~~-----------W~~~~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~----~~-~ 287 (352)
|+||..+ +. |..++.......--+++. .++++|++-|. ..|+||..+++... +. .
T Consensus 82 W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~---~yw~~d~~~~~~~~gPk~I~~~ 158 (225)
T 3oyo_A 82 AYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN---KYVRIAYDSKQLVGNIRNIGDG 158 (225)
T ss_dssp EEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT---EEEEEETTTTEEEEEEEEHHHH
T ss_pred EEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC---eEEEEECCCCeecCCCcchhhc
Confidence 8887532 21 211111000001112223 37899999886 89999987766543 11 1
Q ss_pred CCCC----cCCCCceEEE--eCCEEEEEcCCceEEEEEcC----Ccccccc
Q 045821 288 LSTL----LTRPPCKLVA--IGKTIFVIGKGCSAVVIDVG----NIGNIGG 328 (352)
Q Consensus 288 ~~~~----~~~~~~~~~~--~~~~i~v~gG~~~~~~~d~~----~~~w~~~ 328 (352)
.|.. +....-+++. .++++|+|-|. ..+.||.. ..+...+
T Consensus 159 fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-~ywr~d~~~g~~~~~~~~g 208 (225)
T 3oyo_A 159 FPVLNGTEFESGIDACFASHKEPEAYLFKGQ-NYVRIDFTPGGKADTLVGN 208 (225)
T ss_dssp CGGGTTSTTTTCCSEEEECSSTTEEEEEETT-EEEEEECCTTCGGGCEECC
T ss_pred CCCcccccCCCCcCEEEEeCCCCEEEEEECC-EEEEEeCCcCCccceecCC
Confidence 2221 0122223334 47899999885 56779987 4444443
No 228
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.03 E-value=2 Score=38.62 Aligned_cols=102 Identities=12% Similarity=0.105 Sum_probs=51.2
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCc-EEEecCCCCcccceeEEEE--CC-EEEEEccCCCCCCceEEEEEeCCCCc--ee
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNN-WKLHTEPNIFTEIEDSFVM--DG-KIYIRCSASAATSHVCALVYEPSTDS--WL 240 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~-W~~~~~~~~~~~~~~~~~~--~g-~iyv~GG~~~~~~~~~i~~yd~~~~~--W~ 240 (352)
++.+++.++.+ ..+.+||..+.. .+.+...........++.+ ++ .+++.|+..+ .+..||..+.. -.
T Consensus 243 ~~~~l~s~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg-----~v~vwd~~~~~~~~~ 315 (430)
T 2xyi_A 243 HESLFGSVADD--QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK-----TVALWDLRNLKLKLH 315 (430)
T ss_dssp CTTEEEEEETT--SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTCTTSCSE
T ss_pred CCCEEEEEeCC--CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEeCCCCCCCeE
Confidence 45677766655 678999998752 1111001011111112222 34 4787776553 58888886532 11
Q ss_pred ecCCCCCCCCCCcEEEE--CC-EEEEEecCCCCeEEEEeCCC
Q 045821 241 HADANMASGWRGPAVVV--DD-ALYVLDQSSGTKLMMWQKES 279 (352)
Q Consensus 241 ~~~~~~~~~~~~~~~~~--~~-~l~~~gg~~~~~v~~yd~~~ 279 (352)
.+.. +......+.. ++ .+++.++..+ .+.+||...
T Consensus 316 ~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~-~i~iwd~~~ 353 (430)
T 2xyi_A 316 SFES---HKDEIFQVQWSPHNETILASSGTDR-RLHVWDLSK 353 (430)
T ss_dssp EEEC---CSSCEEEEEECSSCTTEEEEEETTS-CCEEEEGGG
T ss_pred Eeec---CCCCEEEEEECCCCCCEEEEEeCCC-cEEEEeCCC
Confidence 1111 1111111222 33 5777777665 889998876
No 229
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=93.99 E-value=3.5 Score=37.51 Aligned_cols=145 Identities=8% Similarity=0.044 Sum_probs=80.7
Q ss_pred EEEEECCEEEEEeCCCCCCCCCCeEEEEECCCC---------eeEecCCCCCcceeeeeEE--ECCEEEEEeCCCCCCce
Q 045821 114 GFEVLGKNAYLLGGCGWSEDATSEVYCYDASMN---------TWTDAAPMSTARCYFPCGV--LNQKIYCIGGLGDTHSW 182 (352)
Q Consensus 114 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~---------~W~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v 182 (352)
+++.+.+++|+|-| ..+|+++.... .|..++ . .--++.. .++++|+|-| +.+
T Consensus 267 Ai~~~~ge~y~Fkg--------~~~wr~~~~~~~~~p~~I~~~Wp~LP---~--~iDAa~~~~~~g~~~fFKg----~~~ 329 (450)
T 1su3_A 267 AITTIRGEVMFFKD--------RFYMRTNPFYPEVELNFISVFWPQLP---N--GLEAAYEFADRDEVRFFKG----NKY 329 (450)
T ss_dssp EEEEETTEEEEEET--------TEEEECCTTSSSCEEEEGGGTCTTSC---S--SCCEEEEEGGGTEEEEEET----TEE
T ss_pred eEEecCCeEEEEeC--------CEEEEEcCCCCcccceehhHhccCCC---C--CeeEEEEEcCCCeEEEEeC----CEE
Confidence 45668999999987 34455544332 233332 1 1112222 2689999998 778
Q ss_pred EEEeCCCC--cE-EEec---CCCCcc-cceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceee-----cCC-CCC
Q 045821 183 DVYDPRTN--NW-KLHT---EPNIFT-EIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLH-----ADA-NMA 247 (352)
Q Consensus 183 ~~yd~~t~--~W-~~~~---~~~~~~-~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-----~~~-~~~ 247 (352)
|+|+..+- .+ +.+. -+|... ..-+++.. ++++|++-|. ..|+||..+++-.. +.. .+.
T Consensus 330 W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~-------~yw~yd~~~~~~~~gYPk~I~~~fpg 402 (450)
T 1su3_A 330 WAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN-------KYWRYDEYKRSMDPGYPKMIAHDFPG 402 (450)
T ss_dssp EEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT-------EEEEEETTTTEECSSCSEEHHHHSTT
T ss_pred EEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC-------EEEEEeCCCccccCCCCcchhhcCCC
Confidence 88875421 00 1111 122211 12233333 6899999653 48999986543221 100 001
Q ss_pred -CCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEc
Q 045821 248 -SGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPV 285 (352)
Q Consensus 248 -~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~ 285 (352)
...--+++..++++|++-|. ..|+||..+.+-...
T Consensus 403 ip~~iDAA~~~~g~~YFFkg~---~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 403 IGHKVDAVFMKDGFFYFFHGT---RQYKFDPKTKRILTL 438 (450)
T ss_dssp SCSCCSEEEEETTEEEEEETT---EEEEEETTTTEEEEE
T ss_pred CCCCccEEEEcCCeEEEEeCC---EEEEEECCcceEecc
Confidence 11122345578999999886 899999988766543
No 230
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.98 E-value=0.91 Score=39.15 Aligned_cols=143 Identities=11% Similarity=0.066 Sum_probs=77.6
Q ss_pred CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCC
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADAN 245 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~ 245 (352)
+..++.|+.+ ..+.+||..+..................+.+ +++.++.|+.++ .+..||..+.+...+..
T Consensus 54 g~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~- 125 (368)
T 3mmy_A 54 GNFLIAGSWA--NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK-----TAKMWDLSSNQAIQIAQ- 125 (368)
T ss_dssp SEEEEEEETT--SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE-
T ss_pred ceEEEEECCC--CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC-----cEEEEEcCCCCceeecc-
Confidence 4777777765 6788898887433221111111111112222 666666665442 68888988877555422
Q ss_pred CCCCCCCcEE--EECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCceEEEEEcCCc
Q 045821 246 MASGWRGPAV--VVDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCSAVVIDVGNI 323 (352)
Q Consensus 246 ~~~~~~~~~~--~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~d~~~~ 323 (352)
.......... ..++.+++.++.++ .+.+||..+++-...-..+ ....++....+.+++.++.....+||....
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDK-TLKFWDTRSSNPMMVLQLP----ERCYCADVIYPMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTS-EEEEECSSCSSCSEEEECS----SCEEEEEEETTEEEEEEGGGCEEEEECSSS
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCC-cEEEEECCCCcEEEEEecC----CCceEEEecCCeeEEEeCCCcEEEEEeccc
Confidence 1111111112 23667777887766 8999999876532221111 123344455666666666666778887654
No 231
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=93.95 E-value=0.012 Score=55.98 Aligned_cols=37 Identities=8% Similarity=0.286 Sum_probs=28.9
Q ss_pred CCccCCCcHHHHHHhhccCc-cccchhhhhhhhhhccc
Q 045821 15 VPLISGLPDDIALFCLARVP-RRYHAVLKCVSSRWRGL 51 (352)
Q Consensus 15 ~~~~~~lp~dl~~~il~r~p-~~~~~~l~~v~k~W~~l 51 (352)
...|..||+|++.+|++++| .++..+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 35688999999999999999 99999999999999976
No 232
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=93.93 E-value=3.1 Score=36.70 Aligned_cols=144 Identities=7% Similarity=0.064 Sum_probs=81.5
Q ss_pred EEEEECCEEEEEeCCCCCCCCCCeEEEEECCCC---------eeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCce
Q 045821 114 GFEVLGKNAYLLGGCGWSEDATSEVYCYDASMN---------TWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSW 182 (352)
Q Consensus 114 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~---------~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v 182 (352)
++..+++++|+|-| ..+|+++.... .|..+ | ..--++... ++++|++-| +.+
T Consensus 185 Av~~~~g~~~fFkg--------~~~Wr~~~~~~~~~p~~I~~~wpgL---P--~~iDAa~~~~~~g~~~fFkg----~~y 247 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD--------RFFWLKVSERPKTSVNLISSLWPTL---P--SGIEAAYEIEARNQVFLFKD----DKY 247 (365)
T ss_dssp CEEEETTEEEEEET--------TEEEECCSSCCCCCEEEHHHHCSSC---C--SSCCEEEEEGGGTEEEEEET----TEE
T ss_pred eEEEcCCeEEEEeC--------CEEEEEcCCCccCCccchhhhccCC---C--CCccEEEEecCCCEEEEEeC----CEE
Confidence 34567999999976 34566554332 12222 2 111222233 789999998 778
Q ss_pred EEEeCCCCc--E-EEecCC--CCcc-cceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCC-----CCC
Q 045821 183 DVYDPRTNN--W-KLHTEP--NIFT-EIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DAN-----MAS 248 (352)
Q Consensus 183 ~~yd~~t~~--W-~~~~~~--~~~~-~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~-----~~~ 248 (352)
++|+..+-. + +.|... |... .--+++.. ++++|++-|. ..|+||..+++-..- +.. +..
T Consensus 248 Wr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~-------~yw~yd~~~~~v~~gyPk~I~~~f~g~ 320 (365)
T 3ba0_A 248 WLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN-------QYWRYDERRQMMDPGYPKLITKNFQGI 320 (365)
T ss_dssp EECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT-------EEEEEETTTTEECSSCCCCHHHHSTTC
T ss_pred EEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC-------EEEEEeCCcceecCCCCcchhhcCCCC
Confidence 999765321 1 233332 2211 22234443 5899999554 489999876542211 000 011
Q ss_pred C-CCCcEEEE-CCEEEEEecCCCCeEEEEeCCCCceEE
Q 045821 249 G-WRGPAVVV-DDALYVLDQSSGTKLMMWQKESREWSP 284 (352)
Q Consensus 249 ~-~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~~~~W~~ 284 (352)
. ..-+++.. ++++|++-|. ..|+||..+.+-..
T Consensus 321 p~~iDaA~~~~~g~~YfFkg~---~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 321 GPKIDAVFYSKNKYYYFFQGS---NQFEYDFLLQRITK 355 (365)
T ss_dssp CSSCSEEEEETTTEEEEEETT---EEEEEETTTTEEEE
T ss_pred CCccceeeEecCCcEEEEeCC---EEEEEECCccEEec
Confidence 1 12223444 8899999886 89999998877655
No 233
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.86 E-value=2.9 Score=36.00 Aligned_cols=186 Identities=8% Similarity=-0.052 Sum_probs=94.6
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT 147 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~ 147 (352)
++.+|+++.. ...++.||+ .++....+. .+. ........-++.+++... ..+++||+.+++
T Consensus 60 ~~~l~~~d~~----~~~i~~~d~--~~~~~~~~~-~~~----~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 60 SGTAWWFNIL----ERELHELHL--ASGRKTVHA-LPF----MGSALAKISDSKQLIASD--------DGLFLRDTATGV 120 (326)
T ss_dssp TTEEEEEEGG----GTEEEEEET--TTTEEEEEE-CSS----CEEEEEEEETTEEEEEET--------TEEEEEETTTCC
T ss_pred CCEEEEEECC----CCEEEEEEC--CCCcEEEEE-CCC----cceEEEEeCCCeEEEEEC--------CCEEEEECCCCc
Confidence 4678877543 236788898 777655443 221 111222334778777642 348999999988
Q ss_pred eEecCCCCC--cceeeeeEEE--CCEEEEEeCCC----CCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CC-EEEEE
Q 045821 148 WTDAAPMST--ARCYFPCGVL--NQKIYCIGGLG----DTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DG-KIYIR 217 (352)
Q Consensus 148 W~~~~~~~~--~r~~~~~~~~--~~~iyv~gG~~----~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g-~iyv~ 217 (352)
...+...+. +........+ ++++|+..... ....+++|| +.+.+.+.. ........+.. ++ .+|+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEE
Confidence 776644321 1112222222 57777754211 115688888 455554421 00111122222 45 57887
Q ss_pred ccCCCCCCceEEEEEeCC--CC-c------eeecCCCCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEEc
Q 045821 218 CSASAATSHVCALVYEPS--TD-S------WLHADANMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSPV 285 (352)
Q Consensus 218 GG~~~~~~~~~i~~yd~~--~~-~------W~~~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~ 285 (352)
... ...+++||.. ++ + +..+.. .......+.. +|.||+.... +..|.+||+....-..+
T Consensus 197 ~~~-----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~---~~~~p~gi~~d~~G~lwva~~~-~~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 197 DTK-----VNRLMRVPLDARTGLPTGKAEVFIDSTG---IKGGMDGSVCDAEGHIWNARWG-EGAVDRYDTDGNHIARY 266 (326)
T ss_dssp ETT-----TCEEEEEEBCTTTCCBSSCCEEEEECTT---SSSEEEEEEECTTSCEEEEEET-TTEEEEECTTCCEEEEE
T ss_pred ECC-----CCEEEEEEcccccCCcccCceEEEECCC---CCCCCCeeEECCCCCEEEEEeC-CCEEEEECCCCCEEEEE
Confidence 422 2368888864 43 2 222211 0011112333 5677766422 23899999965544444
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.86 E-value=5 Score=38.78 Aligned_cols=116 Identities=18% Similarity=0.204 Sum_probs=67.3
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcc-----cCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPART-----LRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYD 142 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~-----~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d 142 (352)
++.||+.... -.++.+|..+-...|+.-...+... +.....+.++.++.||+... ...++.+|
T Consensus 70 ~g~vyv~~~~-----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlD 137 (689)
T 1yiq_A 70 DGVMYTTGPF-----SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAID 137 (689)
T ss_dssp TTEEEEECGG-----GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEE
T ss_pred CCEEEEEcCC-----CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEE
Confidence 7888876432 2467778722334576543322100 00112234567888888642 35789999
Q ss_pred CCCCe--eEecCC-CCC--cceeeeeEEECCEEEEEeCCCC---CCceEEEeCCCCc--EEEe
Q 045821 143 ASMNT--WTDAAP-MST--ARCYFPCGVLNQKIYCIGGLGD---THSWDVYDPRTNN--WKLH 195 (352)
Q Consensus 143 ~~t~~--W~~~~~-~~~--~r~~~~~~~~~~~iyv~gG~~~---~~~v~~yd~~t~~--W~~~ 195 (352)
..|++ |+.-.. -+. .....+.++.++.+|+..+... ...+..||..|.+ |+.-
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 138 AKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 98886 875432 111 1223345667899988543211 1679999999875 8754
No 235
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.77 E-value=3.9 Score=39.36 Aligned_cols=148 Identities=9% Similarity=0.032 Sum_probs=79.4
Q ss_pred CCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCC-CceEEEeCCCCc---EEEecCCCCcccceeEEEE
Q 045821 135 TSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT-HSWDVYDPRTNN---WKLHTEPNIFTEIEDSFVM 210 (352)
Q Consensus 135 ~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~-~~v~~yd~~t~~---W~~~~~~~~~~~~~~~~~~ 210 (352)
..+++.+|..+..++.+..-...... .+.-++.+|+....+.. ..+..+|..+.. |+.+-+.............
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYE--VHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEE--EEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCceEE--EEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 46788888777777776532222221 12245566666554322 788999987754 8877543222222233445
Q ss_pred CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECC-EEEEEec-CCC-CeEEEEeCCCCceEEccC
Q 045821 211 DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDD-ALYVLDQ-SSG-TKLMMWQKESREWSPVGR 287 (352)
Q Consensus 211 ~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~~~gg-~~~-~~v~~yd~~~~~W~~~~~ 287 (352)
++++++....+ ....++.++.....-..+..+........+..-++ .+++... ... ..++.||..+++.+.+..
T Consensus 329 ~~~lv~~~~~d---g~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 329 GGHLSLEYLKD---ATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp TTEEEEEEEET---TEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEEEEC---CEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 88888875332 23468888875544444432111110111111133 4544432 211 479999999888776654
No 236
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.55 E-value=1.8 Score=36.85 Aligned_cols=185 Identities=13% Similarity=0.078 Sum_probs=92.8
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCC
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEP 198 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~ 198 (352)
+.||+.+.. ...+++|++ +++...+.. +.. .....+.- ++++|+..... ..+.+||+. ++.+.+...
T Consensus 57 ~~l~~~d~~------~~~i~~~~~-~g~~~~~~~-~~~-~~~gl~~d~dG~l~v~~~~~--~~v~~~~~~-g~~~~~~~~ 124 (305)
T 3dr2_A 57 RTLVWSDLV------GRRVLGWRE-DGTVDVLLD-ATA-FTNGNAVDAQQRLVHCEHGR--RAITRSDAD-GQAHLLVGR 124 (305)
T ss_dssp TEEEEEETT------TTEEEEEET-TSCEEEEEE-SCS-CEEEEEECTTSCEEEEETTT--TEEEEECTT-SCEEEEECE
T ss_pred CEEEEEECC------CCEEEEEeC-CCCEEEEeC-CCC-ccceeeECCCCCEEEEECCC--CEEEEECCC-CCEEEEEec
Confidence 446666532 346788888 444333321 111 11222222 57888764322 568899986 666665432
Q ss_pred CCccc---ce-eEEEECCEEEEE----ccCCC--------CCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECC-EE
Q 045821 199 NIFTE---IE-DSFVMDGKIYIR----CSASA--------ATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDD-AL 261 (352)
Q Consensus 199 ~~~~~---~~-~~~~~~g~iyv~----GG~~~--------~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l 261 (352)
..... -. .++.-+|+||+. |.... ......+++||+.+++.+.+. ..... .+.++.-++ .|
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p-~gl~~spdg~~l 202 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP-NGLAFSPDEQTL 202 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE-EEEEECTTSSEE
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC-cceEEcCCCCEE
Confidence 11111 11 223337899985 32110 011347999999888877664 11100 111222345 47
Q ss_pred EEEecCC----CCeEEEEeCCCCceEEc---cCCCCCcCCCCceEEE-eCCEEEEEcCCceEEEEEcCC
Q 045821 262 YVLDQSS----GTKLMMWQKESREWSPV---GRLSTLLTRPPCKLVA-IGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 262 ~~~gg~~----~~~v~~yd~~~~~W~~~---~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~d~~~ 322 (352)
|+..... ...+++||...+..... ...+. ....++.. -++.||+-. ...+.+||++.
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~---~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g 267 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD---GLPDGFCVDRGGWLWSSS-GTGVCVFDSDG 267 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS---SCCCSEEECTTSCEEECC-SSEEEEECTTS
T ss_pred EEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC---CCCCeEEECCCCCEEEec-CCcEEEECCCC
Confidence 7765432 14899999876543221 11111 11112222 356677765 44677888854
No 237
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.52 E-value=2.3 Score=33.82 Aligned_cols=146 Identities=8% Similarity=-0.008 Sum_probs=80.7
Q ss_pred EEEEECCEEEEEeCCCCCCCCCCeEEEEECCCC--eeE--ec----CCCCCcceeeeeEEE--CCEEEEEeCCCCCCceE
Q 045821 114 GFEVLGKNAYLLGGCGWSEDATSEVYCYDASMN--TWT--DA----APMSTARCYFPCGVL--NQKIYCIGGLGDTHSWD 183 (352)
Q Consensus 114 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~--~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~ 183 (352)
+++.+++++|+|-| ..+|+++.... ... .+ +.+|. .--++... ++++|++-| +.++
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~--~IDAa~~~~~~~~~yfFkG----~~yw 76 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPR--KLDSVFEEPLSKKLFFFSG----RQVW 76 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCS--SCSEEEECTTTCCEEEEET----TEEE
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCC--CccEEEEECCCCeEEEEeC----CEEE
Confidence 35567999999977 45677766542 111 11 12332 11122222 678999999 7789
Q ss_pred EEeCCCCcE-EEecC--CCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceee-----cCC-CCC-CCCC
Q 045821 184 VYDPRTNNW-KLHTE--PNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLH-----ADA-NMA-SGWR 251 (352)
Q Consensus 184 ~yd~~t~~W-~~~~~--~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-----~~~-~~~-~~~~ 251 (352)
+|+..+-.- +.|.. +|......-++. .++++|++-|. ..++||..+++-.. +.. -+. +...
T Consensus 77 ~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~-------~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~i 149 (195)
T 1itv_A 77 VYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR-------RLWRFDVKAQMVDPRSASEVDRMFPGVPLDT 149 (195)
T ss_dssp EEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT-------EEEEEETTTTEECGGGCEEHHHHSTTSCSSC
T ss_pred EEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC-------EEEEEeCCcccccCCCccChhhcCCCCCCCC
Confidence 998653211 11211 111111122333 36899999554 38999987654221 100 000 1112
Q ss_pred CcEEEECCEEEEEecCCCCeEEEEeCCCCceE
Q 045821 252 GPAVVVDDALYVLDQSSGTKLMMWQKESREWS 283 (352)
Q Consensus 252 ~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~ 283 (352)
-+++..++.+|++-|. ..++||..+..-.
T Consensus 150 daa~~~~g~~Yffkg~---~y~~~~~~~~~v~ 178 (195)
T 1itv_A 150 HDVFQFREKAYFCQDR---FYWRVSSRSELNQ 178 (195)
T ss_dssp SEEEEETTEEEEEETT---EEEEEECCTTCCE
T ss_pred CEEEEeCCeEEEEeCC---EEEEEECCccEEe
Confidence 2345568999999886 8999999876543
No 238
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=93.50 E-value=1.8 Score=42.33 Aligned_cols=162 Identities=6% Similarity=0.082 Sum_probs=82.2
Q ss_pred CCeeEecCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEEEecC--CCCcccceeEEEE---CCEEEEEc
Q 045821 145 MNTWTDAAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE--PNIFTEIEDSFVM---DGKIYIRC 218 (352)
Q Consensus 145 t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~--~~~~~~~~~~~~~---~g~iyv~G 218 (352)
-++|+.+...+..... .... -++.+|+.+. ..+++=.-.-.+|+.+.. +|. ........ ++.+|+.+
T Consensus 555 G~tW~~~~~~~~~~~i-~~~~~~~~~~~a~~~----g~v~~S~DgG~tW~~~~~~~~p~--~~~~i~~~~~~~g~l~~~~ 627 (737)
T 2cn3_A 555 GNSWKVCTNLGMGAVV-ASDRVNGKKFYAFYN----GKFYISTDGGLTFTDTKAPQLPK--SVNKIKAVPGKEGHVWLAA 627 (737)
T ss_dssp TSSCEECBTCCTTCEE-EECSSCTTCEEEEET----TEEEEESSTTSBCEECCCSSCCS--CCSEEEEETTEEEEEEEEC
T ss_pred CCCCccCCCCCCCceE-EEEecCCCEEEEecC----CEEEEECCCCcCcccccCCCCCC--ccceEEEEeCCCCEEEEEe
Confidence 3569998755543111 1111 1356777652 344443333467998642 332 22223332 57889885
Q ss_pred cCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE---EC---CEEEEEecCCC-CeEEEEeCCCCceEEccCCCCC
Q 045821 219 SASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV---VD---DALYVLDQSSG-TKLMMWQKESREWSPVGRLSTL 291 (352)
Q Consensus 219 G~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~---~~---~~l~~~gg~~~-~~v~~yd~~~~~W~~~~~~~~~ 291 (352)
... .+++-+-...+|+++...... ....+. .+ +.||++|...+ ..+++-+-...+|+++......
T Consensus 628 ~~g------~l~~S~D~G~tW~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~~~~~~ 699 (737)
T 2cn3_A 628 REG------GLWRSTDGGYTFEKLSNVDTA--HVVGFGKAAPGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRINDDEHG 699 (737)
T ss_dssp BTT------CEEEESSTTSSCEECTTCSEE--EEEEEECCCTTCSSCEEEEEEEETTEEEEEEESSTTSSCEECSBTTBC
T ss_pred CCC------cEEEEeCCCcccEECcCCCcc--ceEEEeecCCCCCCcEEEEEEecCCcceEEEeCCCCCCCEeccCCccc
Confidence 432 366666566899998542211 001111 12 26888763221 2366666667899999743221
Q ss_pred cCCCCceEE---EeCCEEEEEcCCceEEEEEcC
Q 045821 292 LTRPPCKLV---AIGKTIFVIGKGCSAVVIDVG 321 (352)
Q Consensus 292 ~~~~~~~~~---~~~~~i~v~gG~~~~~~~d~~ 321 (352)
.......+. ...++||+......+++.++.
T Consensus 700 ~~~~~~~i~~d~~~~g~v~~~t~g~g~~~~~~~ 732 (737)
T 2cn3_A 700 YGAVDTAITGDPRVYGRVYIATNGRGIVYGEPA 732 (737)
T ss_dssp CSCCCSCEEEETTEEEEEEEECBSSCEEEEEEC
T ss_pred cCcccceecCCCCcCceEEEEeCCCceEEEecC
Confidence 111111121 124778887544456666654
No 239
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.29 E-value=6 Score=37.95 Aligned_cols=104 Identities=9% Similarity=0.047 Sum_probs=52.8
Q ss_pred EEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCC
Q 045821 169 KIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMAS 248 (352)
Q Consensus 169 ~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~ 248 (352)
..++.|+.+ ..+.+||..+..-...-.-........+..-++++++.|+.++ .+..||..+.+-...- ...
T Consensus 532 ~~l~s~s~d--~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~~~~~~~~~~--~~~ 602 (694)
T 3dm0_A 532 PTIVSASWD--KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG-----VVLLWDLAEGKKLYSL--EAN 602 (694)
T ss_dssp CEEEEEETT--SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----BCEEEETTTTEEEECC--BCS
T ss_pred ceEEEEeCC--CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCceEEEe--cCC
Confidence 355556555 6789999987764432111111111112223677888776553 4777888766432211 111
Q ss_pred CCCCcEEE-ECCEEEEEecCCCCeEEEEeCCCCceE
Q 045821 249 GWRGPAVV-VDDALYVLDQSSGTKLMMWQKESREWS 283 (352)
Q Consensus 249 ~~~~~~~~-~~~~l~~~gg~~~~~v~~yd~~~~~W~ 283 (352)
......+. -++.++..+. .+ .+.+||..+++-.
T Consensus 603 ~~v~~~~~sp~~~~l~~~~-~~-~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAAT-EH-GIKIWDLESKSIV 636 (694)
T ss_dssp SCEEEEEECSSSSEEEEEE-TT-EEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCcEEEEEc-CC-CEEEEECCCCCCh
Confidence 11111112 2444444443 33 6999999887643
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.27 E-value=3.4 Score=35.05 Aligned_cols=208 Identities=14% Similarity=0.197 Sum_probs=99.4
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCC-CCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNST-RRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.||+. .. .-.++.||+ . ...|......+ . ..+.+.. ++.+|+.. ....++.||+..
T Consensus 107 ~~~l~v~-t~----~~~l~~~d~--~g~~~~~~~~~~~-----~-~~~~~~~~~g~l~vgt-------~~~~l~~~d~~g 166 (330)
T 3hxj_A 107 EDILYVT-SM----DGHLYAINT--DGTEKWRFKTKKA-----I-YATPIVSEDGTIYVGS-------NDNYLYAINPDG 166 (330)
T ss_dssp TTEEEEE-CT----TSEEEEECT--TSCEEEEEECSSC-----C-CSCCEECTTSCEEEEC-------TTSEEEEECTTS
T ss_pred CCEEEEE-ec----CCEEEEEcC--CCCEEEEEcCCCc-----e-eeeeEEcCCCEEEEEc-------CCCEEEEECCCC
Confidence 6667654 21 124677888 5 33454432211 1 1112333 56677642 125688899882
Q ss_pred C-eeEecCCCCCcceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCC-CcEEEecCCCCcccceeEEEECCEEEEEccCCC
Q 045821 146 N-TWTDAAPMSTARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRT-NNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASA 222 (352)
Q Consensus 146 ~-~W~~~~~~~~~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t-~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~ 222 (352)
. .|..-.. .. ...+.+. -++.+|+.. ..+.+||... ..|+.... .......+..-+|.||+.. ..
T Consensus 167 ~~~~~~~~~--~~-~~~~~~~d~~g~l~v~t-----~~l~~~d~~g~~~~~~~~~--~~~~~~~~~~~~g~l~v~t-~~- 234 (330)
T 3hxj_A 167 TEKWRFKTN--DA-ITSAASIGKDGTIYFGS-----DKVYAINPDGTEKWNFYAG--YWTVTRPAISEDGTIYVTS-LD- 234 (330)
T ss_dssp CEEEEEECS--SC-CCSCCEECTTCCEEEES-----SSEEEECTTSCEEEEECCS--SCCCSCCEECTTSCEEEEE-TT-
T ss_pred CEeEEEecC--CC-ceeeeEEcCCCEEEEEe-----CEEEEECCCCcEEEEEccC--CcceeceEECCCCeEEEEc-CC-
Confidence 2 2554322 11 1222333 267777755 4588899432 24665321 1111112222356888863 21
Q ss_pred CCCceEEEEEeCCCCc-eeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCC-ceEEccCCCCCcCCCCceEE
Q 045821 223 ATSHVCALVYEPSTDS-WLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESR-EWSPVGRLSTLLTRPPCKLV 300 (352)
Q Consensus 223 ~~~~~~i~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~ 300 (352)
..+.+||..... |..-.. ........+..++.||+.. ..+ .+++||+..+ .|..- ++. ....+++
T Consensus 235 ----~gl~~~~~~g~~~~~~~~~--~~~~~~~~~~~~g~l~v~t-~~g-gl~~~d~~g~~~~~~~--~~~---~~~~~~~ 301 (330)
T 3hxj_A 235 ----GHLYAINPDGTEKWRFKTG--KRIESSPVIGNTDTIYFGS-YDG-HLYAINPDGTEKWNFE--TGS---WIIATPV 301 (330)
T ss_dssp ----TEEEEECTTSCEEEEEECS--SCCCSCCEECTTSCEEEEC-TTC-EEEEECTTSCEEEEEE--CSS---CCCSCCE
T ss_pred ----CeEEEECCCCCEeEEeeCC--CCccccceEcCCCeEEEec-CCC-CEEEECCCCcEEEEEE--cCC---ccccceE
Confidence 247888875443 543321 1111122222267777643 333 7999998544 35432 222 1222334
Q ss_pred E-eCCEEEEEcCCceEEEEEcC
Q 045821 301 A-IGKTIFVIGKGCSAVVIDVG 321 (352)
Q Consensus 301 ~-~~~~i~v~gG~~~~~~~d~~ 321 (352)
. .++.||+-+ ......+++.
T Consensus 302 ~d~~g~l~~gt-~~G~~~~~~~ 322 (330)
T 3hxj_A 302 IDENGTIYFGT-RNGKFYALFN 322 (330)
T ss_dssp ECTTCCEEEEC-TTSCEEEEEC
T ss_pred EcCCCEEEEEc-CCCeEEEEec
Confidence 4 577888744 4444444433
No 241
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=93.24 E-value=5.7 Score=37.52 Aligned_cols=105 Identities=9% Similarity=0.132 Sum_probs=58.2
Q ss_pred EEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceee-cCC-C
Q 045821 170 IYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADA-N 245 (352)
Q Consensus 170 iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~-~ 245 (352)
.++.|+.+ ..+..||..+.+.... +........++. -+|++++.|+.++ .+..+|..+++-.. +.. .
T Consensus 162 ~l~s~s~D--~~v~lwd~~~~~~~~~--l~~H~~~V~~v~fspdg~~las~s~D~-----~i~lwd~~~g~~~~~~~~~~ 232 (611)
T 1nr0_A 162 RIISGSDD--NTVAIFEGPPFKFKST--FGEHTKFVHSVRYNPDGSLFASTGGDG-----TIVLYNGVDGTKTGVFEDDS 232 (611)
T ss_dssp EEEEEETT--SCEEEEETTTBEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEECBCTT
T ss_pred EEEEEeCC--CeEEEEECCCCeEeee--eccccCceEEEEECCCCCEEEEEECCC-----cEEEEECCCCcEeeeecccc
Confidence 46666655 6788898776544322 221111112222 2678888776653 47788877665432 211 1
Q ss_pred CCCCCCC-c--EEE--ECCEEEEEecCCCCeEEEEeCCCCceEE
Q 045821 246 MASGWRG-P--AVV--VDDALYVLDQSSGTKLMMWQKESREWSP 284 (352)
Q Consensus 246 ~~~~~~~-~--~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~ 284 (352)
.....+. . .+. -+++.++.++.++ .+.+||..+.+...
T Consensus 233 ~~~~~h~~~V~~v~~spdg~~l~s~s~D~-~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 233 LKNVAHSGSVFGLTWSPDGTKIASASADK-TIKIWNVATLKVEK 275 (611)
T ss_dssp SSSCSSSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEE
T ss_pred ccccccCCCEEEEEECCCCCEEEEEeCCC-eEEEEeCCCCceee
Confidence 1110111 1 222 2677777777766 89999998876643
No 242
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=93.22 E-value=0.7 Score=37.88 Aligned_cols=101 Identities=9% Similarity=0.081 Sum_probs=57.5
Q ss_pred ECCEEEEEeCCCCCCceEEEe--CCCCcEE------Eec----CCCC---cccceeEEEE--CCEEEEEccCCCCCCceE
Q 045821 166 LNQKIYCIGGLGDTHSWDVYD--PRTNNWK------LHT----EPNI---FTEIEDSFVM--DGKIYIRCSASAATSHVC 228 (352)
Q Consensus 166 ~~~~iyv~gG~~~~~~v~~yd--~~t~~W~------~~~----~~~~---~~~~~~~~~~--~g~iyv~GG~~~~~~~~~ 228 (352)
.++++|++-| ..+++|+ +.+..-. .+. .+|. +...-++... ++++|++-|..
T Consensus 71 ~~g~~~fFKg----~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~~------- 139 (227)
T 3lp9_A 71 ENNEAFIFYE----NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGDQ------- 139 (227)
T ss_dssp STTEEEEEET----TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETTE-------
T ss_pred CCCEEEEEeC----CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECCE-------
Confidence 5899999999 7889998 3221111 111 1221 1122233333 68999996544
Q ss_pred EEEEeCCCCceee-----cCCCCCC------CCCCcEEE---ECCEEEEEecCCCCeEEEEeCCCC
Q 045821 229 ALVYEPSTDSWLH-----ADANMAS------GWRGPAVV---VDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 229 i~~yd~~~~~W~~-----~~~~~~~------~~~~~~~~---~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
.|+||..+++-.. +....+. ...--++. .++++|++-|. ..|+||..++
T Consensus 140 yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~---~Ywr~d~~~~ 202 (227)
T 3lp9_A 140 YARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD---HYARVKVTPX 202 (227)
T ss_dssp EEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT---EEEEEECCSS
T ss_pred EEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC---EEEEEECCcc
Confidence 8999987553221 1000110 01122333 35899999886 8999998876
No 243
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.22 E-value=3.5 Score=35.03 Aligned_cols=183 Identities=11% Similarity=-0.001 Sum_probs=94.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++.||+..- ....++++|+..+.-..+. .+ ...+.++.. ++++|+.........+..||+.+.+.+.+..
T Consensus 42 ~g~lyv~d~------~~~~I~~~d~~g~~~~~~~-~~--~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 42 DGTIFVTNH------EVGEIVSITPDGNQQIHAT-VE--GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLT 112 (306)
T ss_dssp TSCEEEEET------TTTEEEEECTTCCEEEEEE-CS--SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEeC------CCCeEEEECCCCceEEEEe-CC--CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEe
Confidence 567888752 2356899998865322221 11 222333333 5788887643211358889988888776654
Q ss_pred CCCcccceeEEE-ECCEEEEEccCCCCCCceEEEEEeCCCCc---eeecCC----CCCCCCCC-cEEE-ECCEEEEEecC
Q 045821 198 PNIFTEIEDSFV-MDGKIYIRCSASAATSHVCALVYEPSTDS---WLHADA----NMASGWRG-PAVV-VDDALYVLDQS 267 (352)
Q Consensus 198 ~~~~~~~~~~~~-~~g~iyv~GG~~~~~~~~~i~~yd~~~~~---W~~~~~----~~~~~~~~-~~~~-~~~~l~~~gg~ 267 (352)
.+..+.....+. .++.+|+.... ...++++|+.+.+ |..-+. ........ ..+. .++.||+....
T Consensus 113 ~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~ 187 (306)
T 2p4o_A 113 LPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE 187 (306)
T ss_dssp CTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT
T ss_pred CCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCC
Confidence 433333223332 35577876321 1268999987542 211110 01111111 1233 34578887654
Q ss_pred CCCeEEEEeCCC-CceE---EccCCCCCcCCCCceEEE-eCCEEEEEc-CCceEEEEEcC
Q 045821 268 SGTKLMMWQKES-REWS---PVGRLSTLLTRPPCKLVA-IGKTIFVIG-KGCSAVVIDVG 321 (352)
Q Consensus 268 ~~~~v~~yd~~~-~~W~---~~~~~~~~~~~~~~~~~~-~~~~i~v~g-G~~~~~~~d~~ 321 (352)
.+ .|++||++. ++.. .+..+ ..-.+++. -++.||+.. +...+..||++
T Consensus 188 ~~-~I~~~~~~~~g~~~~~~~~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 188 KM-LLLRIPVDSTDKPGEPEIFVEQ-----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TT-EEEEEEBCTTSCBCCCEEEEES-----CCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CC-EEEEEEeCCCCCCCccEEEecc-----CCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 44 899999875 2221 11111 01122332 356788764 34567778875
No 244
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=93.06 E-value=5.1 Score=36.46 Aligned_cols=148 Identities=5% Similarity=0.002 Sum_probs=80.8
Q ss_pred eeEEECCEEEEEeCCCCCCceEEEeCCCCcEEE--ecC-CCCc-ccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCC
Q 045821 162 PCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKL--HTE-PNIF-TEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPS 235 (352)
Q Consensus 162 ~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~--~~~-~~~~-~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~ 235 (352)
+++.+++++|+|-| ..+++++.....+.. |.. .+.. ...-++... +|++|++=|.. +|+|+..
T Consensus 267 Ai~~~~ge~y~Fkg----~~~wr~~~~~~~~~p~~I~~~Wp~LP~~iDAa~~~~~~g~~~fFKg~~-------~W~~~~~ 335 (450)
T 1su3_A 267 AITTIRGEVMFFKD----RFYMRTNPFYPEVELNFISVFWPQLPNGLEAAYEFADRDEVRFFKGNK-------YWAVQGQ 335 (450)
T ss_dssp EEEEETTEEEEEET----TEEEECCTTSSSCEEEEGGGTCTTSCSSCCEEEEEGGGTEEEEEETTE-------EEEEETT
T ss_pred eEEecCCeEEEEeC----CEEEEEcCCCCcccceehhHhccCCCCCeeEEEEEcCCCeEEEEeCCE-------EEEecCC
Confidence 45667999999999 667888776544332 111 1111 112233333 68999995543 7777643
Q ss_pred CC--ce-eecC---CCCCC-CCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceE-----Ecc-CCCCCcCCCCceEE
Q 045821 236 TD--SW-LHAD---ANMAS-GWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWS-----PVG-RLSTLLTRPPCKLV 300 (352)
Q Consensus 236 ~~--~W-~~~~---~~~~~-~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~-----~~~-~~~~~~~~~~~~~~ 300 (352)
+- .+ ..+. ..+.. ..--+++.. ++++|++-|. ..|+||..+++-. .+. ..|. .+...-+++
T Consensus 336 ~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~---~yw~yd~~~~~~~~gYPk~I~~~fpg-ip~~iDAA~ 411 (450)
T 1su3_A 336 NVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN---KYWRYDEYKRSMDPGYPKMIAHDFPG-IGHKVDAVF 411 (450)
T ss_dssp EECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT---EEEEEETTTTEECSSCSEEHHHHSTT-SCSCCSEEE
T ss_pred cccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC---EEEEEeCCCccccCCCCcchhhcCCC-CCCCccEEE
Confidence 21 00 0010 00111 111223333 6899999885 8999998754322 111 1121 122233444
Q ss_pred EeCCEEEEEcCCceEEEEEcCCccc
Q 045821 301 AIGKTIFVIGKGCSAVVIDVGNIGN 325 (352)
Q Consensus 301 ~~~~~i~v~gG~~~~~~~d~~~~~w 325 (352)
..++++|+|-|. ..+-||..+.+=
T Consensus 412 ~~~g~~YFFkg~-~ywr~d~~~~~v 435 (450)
T 1su3_A 412 MKDGFFYFFHGT-RQYKFDPKTKRI 435 (450)
T ss_dssp EETTEEEEEETT-EEEEEETTTTEE
T ss_pred EcCCeEEEEeCC-EEEEEECCcceE
Confidence 578999999876 566788776553
No 245
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=92.96 E-value=4 Score=34.99 Aligned_cols=187 Identities=11% Similarity=-0.016 Sum_probs=97.1
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCC----CCeeEeccCCCcccCCcceEEEE--ECCEEEEEeCCCCCCCCCCeEEEE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTR----RSWKMIHELPARTLRRKGMGFEV--LGKNAYLLGGCGWSEDATSEVYCY 141 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~----~~w~~~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~ 141 (352)
++.||+.-. ....++.+|+ .+ .....+.... .... ..+++ .++.||+.-. ....+.++
T Consensus 41 ~~~ly~~D~----~~~~I~~~~~--~g~~~~~~~~~~~~~~---~~~p-~glavd~~~~~ly~~d~------~~~~I~~~ 104 (316)
T 1ijq_A 41 SNRIYWSDL----SQRMICSTQL--DRAHGVSSYDTVISRD---IQAP-DGLAVDWIHSNIYWTDS------VLGTVSVA 104 (316)
T ss_dssp TTEEEEEET----TTTEEEEEEC----------CEEEECSS---CSCC-CEEEEETTTTEEEEEET------TTTEEEEE
T ss_pred CCEEEEEEC----CCCcEEEEEC--CCCCCCcccEEEEeCC---CCCc-CEEEEeecCCeEEEEEC------CCCEEEEE
Confidence 567888732 2335677777 54 2222222111 0111 23443 4789999853 24678889
Q ss_pred ECCCCeeEecC--CCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEE
Q 045821 142 DASMNTWTDAA--PMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIY 215 (352)
Q Consensus 142 d~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iy 215 (352)
|+....-+.+. .+..| ...++ .++.||+..... ...++++++....-+.+.... ...-...+.- +++||
T Consensus 105 ~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~-~~~I~~~~~dG~~~~~~~~~~-~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 105 DTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLY 179 (316)
T ss_dssp ETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEE
T ss_pred eCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC-CCeEEEEcCCCCCeEEEEECC-CCCceEEEEeccCCEEE
Confidence 98765433322 22223 23333 368999986321 157889988654433332111 1112233333 68999
Q ss_pred EEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCC-cEEEECCEEEEEecCCCCeEEEEeCCCCc
Q 045821 216 IRCSASAATSHVCALVYEPSTDSWLHADANMASGWRG-PAVVVDDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 216 v~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
+.-.. ...|+++|.....-+.+........+. ..++.++.||+..... ..|.++|+.+++
T Consensus 180 ~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~-~~V~~~~~~~g~ 240 (316)
T 1ijq_A 180 WVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN-EAIFSANRLTGS 240 (316)
T ss_dssp EEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTT-TEEEEEETTTCC
T ss_pred EEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCC-CeEEEEeCCCCc
Confidence 98422 237889988643322221111111111 2244688999987444 499999986554
No 246
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.93 E-value=4.1 Score=35.06 Aligned_cols=186 Identities=6% Similarity=0.028 Sum_probs=81.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeE-ecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWT-DAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~-~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.+.+.|+. ...+.+||..+++.. .+.....+ . .+++.. ++...+.|+.+ ..+.+||.....-....
T Consensus 87 ~~~~l~s~s~------D~~v~lwd~~~~~~~~~~~~h~~~-v-~~v~~sp~~~~l~s~~~d--~~i~~wd~~~~~~~~~~ 156 (343)
T 2xzm_R 87 ENCFAISSSW------DKTLRLWDLRTGTTYKRFVGHQSE-V-YSVAFSPDNRQILSAGAE--REIKLWNILGECKFSSA 156 (343)
T ss_dssp STTEEEEEET------TSEEEEEETTSSCEEEEEECCCSC-E-EEEEECSSTTEEEEEETT--SCEEEEESSSCEEEECC
T ss_pred CCCEEEEEcC------CCcEEEEECCCCcEEEEEcCCCCc-E-EEEEECCCCCEEEEEcCC--CEEEEEeccCCceeeee
Confidence 4455555553 356888998877532 22111111 1 112221 45556666655 67888888744322222
Q ss_pred CCCCcccceeEEEE--C----------CEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEE
Q 045821 197 EPNIFTEIEDSFVM--D----------GKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVL 264 (352)
Q Consensus 197 ~~~~~~~~~~~~~~--~----------g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 264 (352)
..........++.+ + +.+++.|+.++ .+..||.....-..+.. ........+...+++.++.
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~-h~~~v~~~~~s~~g~~l~s 230 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG-----RLKVWNTNFQIRYTFKA-HESNVNHLSISPNGKYIAT 230 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS-----EEEEEETTTEEEEEEEC-CSSCEEEEEECTTSSEEEE
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC-----EEEEEcCCCceeEEEcC-ccccceEEEECCCCCEEEE
Confidence 11111111111211 1 13455554442 46667743221111111 0000001112236777777
Q ss_pred ecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCceEEEEEcCCcc
Q 045821 265 DQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 265 gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
|+.++ .+.+||..+..-. ...+.. .....++. ..++.++..|....+.+||..+..
T Consensus 231 gs~dg-~v~iwd~~~~~~~-~~~~~~--~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 231 GGKDK-KLLIWDILNLTYP-QREFDA--GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp EETTC-EEEEEESSCCSSC-SEEEEC--SSCEEEEEECSSSCEEEEEESSCEEEEESSSCC
T ss_pred EcCCC-eEEEEECCCCccc-ceeecC--CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 87766 8999998432210 000000 00111222 224555555544457788877543
No 247
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.70 E-value=1.1 Score=42.00 Aligned_cols=174 Identities=9% Similarity=-0.031 Sum_probs=89.8
Q ss_pred EecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE
Q 045821 87 VLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL 166 (352)
Q Consensus 87 ~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~ 166 (352)
+||. .++....+...+ . .......+|+..+++..+. .....++++|..+++.+.+....... ...+..
T Consensus 136 l~d~--~~g~~~~l~~~~---~---~~~~~spDG~~la~~~~~~--~~~~~i~~~d~~~g~~~~l~~~~~~~--~~~~~S 203 (582)
T 3o4h_A 136 LYAL--DGGGLRELARLP---G---FGFVSDIRGDLIAGLGFFG--GGRVSLFTSNLSSGGLRVFDSGEGSF--SSASIS 203 (582)
T ss_dssp EEEE--ETTEEEEEEEES---S---CEEEEEEETTEEEEEEEEE--TTEEEEEEEETTTCCCEEECCSSCEE--EEEEEC
T ss_pred EEEc--cCCcEEEeecCC---C---ceEEECCCCCEEEEEEEcC--CCCeEEEEEcCCCCCceEeecCCCcc--ccceEC
Confidence 5577 777666665433 1 2223334555444443221 11256999999999888775433211 222222
Q ss_pred -CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeE--------EEECCEEEEEccCCCCCCceEEEEEeCCCC
Q 045821 167 -NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDS--------FVMDGKIYIRCSASAATSHVCALVYEPSTD 237 (352)
Q Consensus 167 -~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~--------~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~ 237 (352)
||+.++.+..+....++++|..+++.+.+..... .....+ ..-+|++++.+...+ .+..|+. +
T Consensus 204 pDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~~~--g 275 (582)
T 3o4h_A 204 PGMKVTAGLETAREARLVTVDPRDGSVEDLELPSK-DFSSYRPTAITWLGYLPDGRLAVVARREG-----RSAVFID--G 275 (582)
T ss_dssp TTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCS-HHHHHCCSEEEEEEECTTSCEEEEEEETT-----EEEEEET--T
T ss_pred CCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCc-ChhhhhhccccceeEcCCCcEEEEEEcCC-----cEEEEEE--C
Confidence 5554444433322579999999988773322111 111111 334677777754332 3556666 4
Q ss_pred ceeecCCCCCCCCCCcEEEECCEEEEEecCCC--CeEEEEeCCCCceEEc
Q 045821 238 SWLHADANMASGWRGPAVVVDDALYVLDQSSG--TKLMMWQKESREWSPV 285 (352)
Q Consensus 238 ~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~--~~v~~yd~~~~~W~~~ 285 (352)
+.... +.......++. ++++++.++... ..++.+|..+ +.+++
T Consensus 276 ~~~~~---~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 276 ERVEA---PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEECC---CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred Ceecc---CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 43331 11111112334 888887765443 4688888765 55444
No 248
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.52 E-value=4.7 Score=34.69 Aligned_cols=142 Identities=9% Similarity=0.030 Sum_probs=64.9
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEE-ecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKL-HTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADAN 245 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~ 245 (352)
++.+.+.|+.+ ..+.+||..+.+... +.. ....-...+..-+++..+.|+.++ .+..||.....-......
T Consensus 87 ~~~~l~s~s~D--~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~~ 158 (343)
T 2xzm_R 87 ENCFAISSSWD--KTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILSAGAER-----EIKLWNILGECKFSSAEK 158 (343)
T ss_dssp STTEEEEEETT--SEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEEEETTS-----CEEEEESSSCEEEECCTT
T ss_pred CCCEEEEEcCC--CcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccCCceeeeecc
Confidence 45566666655 688899998876432 211 111111111222566666666543 466777653322222111
Q ss_pred CCCCCCCcEEEE--C----------CEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCC
Q 045821 246 MASGWRGPAVVV--D----------DALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKG 312 (352)
Q Consensus 246 ~~~~~~~~~~~~--~----------~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~ 312 (352)
......-..+.. + +.+++.|+.++ .+.+||.....-..+..-. ....++. ..+++.++.|+.
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~h~----~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG-RLKVWNTNFQIRYTFKAHE----SNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS-EEEEEETTTEEEEEEECCS----SCEEEEEECTTSSEEEEEET
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCC-EEEEEcCCCceeEEEcCcc----ccceEEEECCCCCEEEEEcC
Confidence 111100011111 1 24566676665 8999995432221221111 1111222 235566666665
Q ss_pred ce-EEEEEcC
Q 045821 313 CS-AVVIDVG 321 (352)
Q Consensus 313 ~~-~~~~d~~ 321 (352)
+. +.++|+.
T Consensus 234 dg~v~iwd~~ 243 (343)
T 2xzm_R 234 DKKLLIWDIL 243 (343)
T ss_dssp TCEEEEEESS
T ss_pred CCeEEEEECC
Confidence 54 5578874
No 249
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.51 E-value=8.7 Score=37.76 Aligned_cols=146 Identities=11% Similarity=-0.018 Sum_probs=82.2
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecC--CCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEE
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAA--PMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWK 193 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~ 193 (352)
.++.||+.-. ....++++++....-+.+. .+..|+ ++++ .++.||+.--... ..|+++++....-+
T Consensus 481 ~~~~LY~tD~------~~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g~~-~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 481 IHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIY 550 (791)
T ss_dssp TTTEEEEEET------TTTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSSS-CEEEEEETTSCCEE
T ss_pred cCCcEEEEec------CCCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCCCC-CeEEEEecCCCceE
Confidence 4779999853 3467889998866544442 222332 3333 2589999862211 57888888765444
Q ss_pred EecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCC-cEEEECCEEEEEecCCCC
Q 045821 194 LHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRG-PAVVVDDALYVLDQSSGT 270 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~~~l~~~gg~~~~ 270 (352)
.+..-.. ..-.++++ .+++||+.-.. ...|+++|+....=..+........+. +..+.++.||+.....+
T Consensus 551 ~lv~~~l-~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~- 623 (791)
T 3m0c_C 551 SLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINE- 623 (791)
T ss_dssp EEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTT-
T ss_pred EEEeCCC-CCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCC-
Confidence 4332111 11112333 36899998422 237899988654333332111111122 23457889999986554
Q ss_pred eEEEEeCCCC
Q 045821 271 KLMMWQKESR 280 (352)
Q Consensus 271 ~v~~yd~~~~ 280 (352)
.|+++|..++
T Consensus 624 ~I~~~dk~tG 633 (791)
T 3m0c_C 624 AIFSANRLTG 633 (791)
T ss_dssp EEEEEETTTC
T ss_pred EEEEEeCCCC
Confidence 8888886554
No 250
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.40 E-value=8.2 Score=37.18 Aligned_cols=193 Identities=7% Similarity=-0.047 Sum_probs=98.5
Q ss_pred ceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECC-EEEEEeCCCC------CCCCCCeEEEEECCCCee--EecC
Q 045821 82 RVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGK-NAYLLGGCGW------SEDATSEVYCYDASMNTW--TDAA 152 (352)
Q Consensus 82 ~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~------~~~~~~~~~~~d~~t~~W--~~~~ 152 (352)
...++++|. .++...... .+ ..+.....-. ++ .||....... .......++.++..+.+- ..+.
T Consensus 154 ~~~i~v~dl--~tg~~~~~~-~~---~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~ 226 (693)
T 3iuj_A 154 WREIHLMDV--ESKQPLETP-LK---DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF 226 (693)
T ss_dssp EEEEEEEET--TTCSEEEEE-EE---EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE
T ss_pred eEEEEEEEC--CCCCCCccc-cC---CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE
Confidence 356788888 887765432 11 1111122223 54 4554432211 012345688888776642 1222
Q ss_pred CCCC--cceeeeeEEE-CCE-EEEEeCCCCC-CceEEEeCCCC--cEEEecCCCCcccceeEEEECCEEEEEccCCCCCC
Q 045821 153 PMST--ARCYFPCGVL-NQK-IYCIGGLGDT-HSWDVYDPRTN--NWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATS 225 (352)
Q Consensus 153 ~~~~--~r~~~~~~~~-~~~-iyv~gG~~~~-~~v~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~ 225 (352)
..+. +.....+..- +++ |++....... +.++.+|..+. .|+.+....... .......+++||+..... ..
T Consensus 227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~--~~ 303 (693)
T 3iuj_A 227 GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD-VSLVDNKGSTLYLLTNRD--AP 303 (693)
T ss_dssp SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC-EEEEEEETTEEEEEECTT--CT
T ss_pred ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce-EEEEeccCCEEEEEECCC--CC
Confidence 2221 2212222222 454 4443332222 68899998765 688776432222 222344578899885432 22
Q ss_pred ceEEEEEeCCCC---ceeecCCCCCCCCCCcEEEECCEEEEEecCCC-CeEEEEeCCCCceEEcc
Q 045821 226 HVCALVYEPSTD---SWLHADANMASGWRGPAVVVDDALYVLDQSSG-TKLMMWQKESREWSPVG 286 (352)
Q Consensus 226 ~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~-~~v~~yd~~~~~W~~~~ 286 (352)
...++..|..+. .|+.+.+...... .....++.|++.....+ ..++++|.+++....+.
T Consensus 304 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 304 NRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred CCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence 347888888763 4887643222221 22345667766544333 47899999877666554
No 251
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.39 E-value=7.3 Score=36.62 Aligned_cols=192 Identities=11% Similarity=0.036 Sum_probs=95.5
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeE-ecCC--C--------CCcceeeeeEEECCEEEEEeCCCCCCceEEEeCC
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWT-DAAP--M--------STARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPR 188 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~-~~~~--~--------~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~ 188 (352)
..+|+..- ....+.++|..+.+-. .++- + +.+|.....+..++..+++.-.. ...+.+.|..
T Consensus 256 k~l~v~n~------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~-~g~v~~vd~~ 328 (567)
T 1qks_A 256 KYAIAGAY------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE-TGKILLVDYT 328 (567)
T ss_dssp TEEEEEEE------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT-TTEEEEEETT
T ss_pred CEEEEEEc------cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC-CCeEEEEecC
Confidence 36776642 2466788898776532 2221 1 12233222222233333332111 1677888887
Q ss_pred CCcEEEecCCCCcccceeE-EEECCE-EEEEccCCCCCCceEEEEEeCCCCceee-cCC--CCCCCCCCcEEEE--CCEE
Q 045821 189 TNNWKLHTEPNIFTEIEDS-FVMDGK-IYIRCSASAATSHVCALVYEPSTDSWLH-ADA--NMASGWRGPAVVV--DDAL 261 (352)
Q Consensus 189 t~~W~~~~~~~~~~~~~~~-~~~~g~-iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~--~~~~~~~~~~~~~--~~~l 261 (352)
+.....+...+..+..+.. ..-+|+ +|+.. ...+.+.++|..+++=.. ++. ..++...+..+.. ++.+
T Consensus 329 ~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~-----~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v 403 (567)
T 1qks_A 329 DLNNLKTTEISAERFLHDGGLDGSHRYFITAA-----NARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPV 403 (567)
T ss_dssp CSSEEEEEEEECCSSEEEEEECTTSCEEEEEE-----GGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEE
T ss_pred CCccceeeeeeccccccCceECCCCCEEEEEe-----CCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcE
Confidence 7655444433333332322 223555 44442 123468889999876432 111 1223223333333 3677
Q ss_pred EEEecCCCCeEEEEeCCCCc-----eEEccCCCCCcCCCCce-EEEeCCEEEEEc--C-----CceEEEEEcCCc
Q 045821 262 YVLDQSSGTKLMMWQKESRE-----WSPVGRLSTLLTRPPCK-LVAIGKTIFVIG--K-----GCSAVVIDVGNI 323 (352)
Q Consensus 262 ~~~gg~~~~~v~~yd~~~~~-----W~~~~~~~~~~~~~~~~-~~~~~~~i~v~g--G-----~~~~~~~d~~~~ 323 (352)
|+.+......|.++|..+.. |+.+..++..-....+. ...-+..+|+-. + ..++.+||+.+.
T Consensus 404 ~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 77765443489999887633 88776554321111111 112245788844 2 236889999875
No 252
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.37 E-value=5.8 Score=35.38 Aligned_cols=146 Identities=10% Similarity=-0.036 Sum_probs=80.5
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecC--CCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEE
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAA--PMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWK 193 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~ 193 (352)
.++.||+... ....++++|+....-..+. .+..|+ ++++ .++.||+.-.... ..++++++....=+
T Consensus 169 ~~~~lY~~d~------~~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~~-~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 169 IHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIY 238 (400)
T ss_dssp TTTEEEEEET------TTTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSSS-CCEEEEETTSCSCE
T ss_pred cCCceEEEEC------CCCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCCC-CEEEEEeCCCCccE
Confidence 3789999853 2357888888766544332 222332 3333 2688998763211 57888988754333
Q ss_pred EecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCC-cEEEECCEEEEEecCCCC
Q 045821 194 LHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRG-PAVVVDDALYVLDQSSGT 270 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~~~l~~~gg~~~~ 270 (352)
.+..-. ...-...++- +++||+.-.. ...|+++|.....-+.+........+. ..++.++.||+..-.. .
T Consensus 239 ~~~~~~-l~~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~-~ 311 (400)
T 3p5b_L 239 SLVTEN-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN-E 311 (400)
T ss_dssp EEECSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSS-C
T ss_pred EEEECC-CCceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCC-C
Confidence 332111 1111223333 6899998422 247899998654333332111111111 2345788999998443 3
Q ss_pred eEEEEeCCCC
Q 045821 271 KLMMWQKESR 280 (352)
Q Consensus 271 ~v~~yd~~~~ 280 (352)
.|+++|..++
T Consensus 312 ~V~~~~~~~G 321 (400)
T 3p5b_L 312 AIFSANRLTG 321 (400)
T ss_dssp SEEEEESSSC
T ss_pred eEEEEEcCCC
Confidence 8999996554
No 253
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=92.37 E-value=8.3 Score=37.17 Aligned_cols=146 Identities=6% Similarity=-0.093 Sum_probs=82.2
Q ss_pred CCeEEEEECCC------C--eeEecCCCCCcceeeeeEEECCEEEEEeCCCCC-CceEEEeCCCC---cEEEecCCCCcc
Q 045821 135 TSEVYCYDASM------N--TWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT-HSWDVYDPRTN---NWKLHTEPNIFT 202 (352)
Q Consensus 135 ~~~~~~~d~~t------~--~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~-~~v~~yd~~t~---~W~~~~~~~~~~ 202 (352)
..+++.+|..+ . .+..+........ .....-++.+|+.+..+.. ..++.+|..+. .|+.+.+.....
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC
Confidence 57899999876 4 4666654322222 2223346788888765443 67899998875 588875432222
Q ss_pred cceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCc-eeecCCCCCCCCCCcEEEE--CC-EEEEEe-cCCC-CeEEEE
Q 045821 203 EIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDS-WLHADANMASGWRGPAVVV--DD-ALYVLD-QSSG-TKLMMW 275 (352)
Q Consensus 203 ~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~-W~~~~~~~~~~~~~~~~~~--~~-~l~~~g-g~~~-~~v~~y 275 (352)
........ ++.+++....+ ....++.+|+.+++ ...+..+ ......+.. ++ .+++.. +... ..++.|
T Consensus 337 ~~~~~~~~~~~~lv~~~~~~---g~~~l~~~~~~~g~~~~~l~~~---~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~ 410 (710)
T 2xdw_A 337 VLEWVACVRSNFLVLCYLHD---VKNTLQLHDLATGALLKIFPLE---VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC 410 (710)
T ss_dssp EEEEEEEETTTEEEEEEEET---TEEEEEEEETTTCCEEEEECCC---SSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred eEEEEEEEcCCEEEEEEEEC---CEEEEEEEECCCCCEEEecCCC---CceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence 22234445 67777764332 23468889985554 4555432 111111222 33 555442 3222 589999
Q ss_pred eCCCCc--eEEccC
Q 045821 276 QKESRE--WSPVGR 287 (352)
Q Consensus 276 d~~~~~--W~~~~~ 287 (352)
|..+++ .+.+..
T Consensus 411 d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 411 DLTKEELEPRVFRE 424 (710)
T ss_dssp ETTSSSCCCEEEEE
T ss_pred ECCCCccceEEeee
Confidence 998877 665543
No 254
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=92.36 E-value=4.7 Score=35.82 Aligned_cols=108 Identities=10% Similarity=0.070 Sum_probs=57.0
Q ss_pred EEEEEeCCCCCCceEEEeCCCCcE-----EEecCCCCc-----------ccceeEEEECCEEEEEccCCCCCCceEEEEE
Q 045821 169 KIYCIGGLGDTHSWDVYDPRTNNW-----KLHTEPNIF-----------TEIEDSFVMDGKIYIRCSASAATSHVCALVY 232 (352)
Q Consensus 169 ~iyv~gG~~~~~~v~~yd~~t~~W-----~~~~~~~~~-----------~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~y 232 (352)
.+++.|+.+ ..+.+||..+..- ..+...... ........-++++++.|+. ..+..|
T Consensus 240 ~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iw 311 (447)
T 3dw8_B 240 NTFVYSSSK--GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVW 311 (447)
T ss_dssp TEEEEEETT--SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEE
T ss_pred cEEEEEeCC--CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEE
Confidence 677777765 6789999988763 333211110 1111112226666666543 258888
Q ss_pred eCCC-Cce-eecCCCCCCC--------------CCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEc
Q 045821 233 EPST-DSW-LHADANMASG--------------WRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPV 285 (352)
Q Consensus 233 d~~~-~~W-~~~~~~~~~~--------------~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~ 285 (352)
|..+ .+- ..+....... ........+++.++.|+.++ .+.+||..+++-..+
T Consensus 312 d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg-~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 312 DLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN-FFRMFDRNTKRDITL 379 (447)
T ss_dssp ETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT-EEEEEETTTCCEEEE
T ss_pred eCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCC-EEEEEEcCCCcceee
Confidence 8865 321 1111100000 00012234666667777766 899999998876554
No 255
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=92.23 E-value=7.8 Score=36.56 Aligned_cols=151 Identities=11% Similarity=0.050 Sum_probs=79.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCC--C-Cccee--eeeEEE-CCEEEEEeCCCCCCceEEEeCCCCc
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPM--S-TARCY--FPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~--~-~~r~~--~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
++.+++.|+.+ ..+.+||..+++... +... . ..+.. .+++.. +++.++.++.+ ..+.++|..+.+
T Consensus 201 dg~~las~s~D------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D--~~v~lWd~~~~~ 272 (611)
T 1nr0_A 201 DGSLFASTGGD------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD--KTIKIWNVATLK 272 (611)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT--SEEEEEETTTTE
T ss_pred CCCEEEEEECC------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC--CeEEEEeCCCCc
Confidence 56666667643 457888987765432 2110 0 01111 112222 56677777765 688999999877
Q ss_pred EEEecCCCCcc-cceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEE--EECCEEEEEecCC
Q 045821 192 WKLHTEPNIFT-EIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAV--VVDDALYVLDQSS 268 (352)
Q Consensus 192 W~~~~~~~~~~-~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~--~~~~~l~~~gg~~ 268 (352)
....-...... .....+..++..++.++.++ .+..+|+.+.+-...-. .+...-..+ .-+++.++.++.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~-----~i~~~~~~~~~~~~~~~--gh~~~v~~l~~spdg~~l~s~s~D 345 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANG-----FINFVNPELGSIDQVRY--GHNKAITALSSSADGKTLFSADAE 345 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTC-----CEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCC-----cEEEEeCCCCCcceEEc--CCCCCEEEEEEeCCCCEEEEEeCC
Confidence 64432121111 11223344666666655442 46677776654322211 111111112 2367777777776
Q ss_pred CCeEEEEeCCCCceEEc
Q 045821 269 GTKLMMWQKESREWSPV 285 (352)
Q Consensus 269 ~~~v~~yd~~~~~W~~~ 285 (352)
+ .+.+||..+......
T Consensus 346 ~-~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 346 G-HINSWDISTGISNRV 361 (611)
T ss_dssp S-CEEEEETTTCCEEEC
T ss_pred C-cEEEEECCCCceeee
Confidence 6 899999988766543
No 256
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.20 E-value=2.7 Score=40.72 Aligned_cols=149 Identities=10% Similarity=-0.032 Sum_probs=79.1
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCC--CCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEE
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAP--MSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWK 193 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~--~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~ 193 (352)
.++.||+.-. ....+.++++....-..+.. +..|+ .+++ .++.||+..... ...++++++....-+
T Consensus 463 ~~g~LY~tD~------~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~~-~~~I~~~~~dG~~~~ 532 (699)
T 1n7d_A 463 IHSNIYWTDS------VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIY 532 (699)
T ss_dssp SSSBCEECCT------TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCSS-SCCEEBCCSSSCCCC
T ss_pred eCCcEEEEec------cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccCC-CCeEEEEeCCCCCee
Confidence 4678888632 24568888887665444322 22232 2232 257888765211 156788877644322
Q ss_pred EecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCC-CCCCCcEEEECCEEEEEecCCCC
Q 045821 194 LHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMA-SGWRGPAVVVDDALYVLDQSSGT 270 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~-~~~~~~~~~~~~~l~~~gg~~~~ 270 (352)
.+.... ...-.++++ .+++||+.-.. ...|+++|+....-+.+..... ...-....+.++.||+..... .
T Consensus 533 ~l~~~~-l~~PnGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~-~ 605 (699)
T 1n7d_A 533 SLVTEN-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN-E 605 (699)
T ss_dssp EESCSS-CSSCCCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTT-T
T ss_pred EEEeCC-CCCccEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCC-C
Confidence 222111 111112333 25789998422 2368899886543333322111 111122345678999987443 4
Q ss_pred eEEEEeCCCCceE
Q 045821 271 KLMMWQKESREWS 283 (352)
Q Consensus 271 ~v~~yd~~~~~W~ 283 (352)
.|.++|+.+++-.
T Consensus 606 ~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 606 AIFSANRLTGSDV 618 (699)
T ss_dssp CEEEEETTTEEEE
T ss_pred eEEEEEccCCCce
Confidence 8999998765543
No 257
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.02 E-value=2 Score=40.24 Aligned_cols=139 Identities=7% Similarity=0.016 Sum_probs=74.9
Q ss_pred CCeEEEEEC--CCCeeEecCCCCCcceeeeeEEECC-EEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEEC
Q 045821 135 TSEVYCYDA--SMNTWTDAAPMSTARCYFPCGVLNQ-KIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMD 211 (352)
Q Consensus 135 ~~~~~~~d~--~t~~W~~~~~~~~~r~~~~~~~~~~-~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~ 211 (352)
...+|..+. ....- .+......+ ......++ .++++.+.. ..+.+||..+++-+.+...+. ...+..-+
T Consensus 89 ~~~l~~~~~~~~g~~~-~l~~~~~~~--~~~~s~dg~~~~~~s~~~--~~~~l~d~~~g~~~~l~~~~~---~~~~~spD 160 (582)
T 3o4h_A 89 QHALFKVNTSRPGEEQ-RLEAVKPMR--ILSGVDTGEAVVFTGATE--DRVALYALDGGGLRELARLPG---FGFVSDIR 160 (582)
T ss_dssp CEEEEEEETTSTTCCE-ECTTSCSBE--EEEEEECSSCEEEEEECS--SCEEEEEEETTEEEEEEEESS---CEEEEEEE
T ss_pred ceEEEEEeccCCCccc-cccCCCCce--eeeeCCCCCeEEEEecCC--CCceEEEccCCcEEEeecCCC---ceEEECCC
Confidence 346777777 43322 333333222 22333443 444444433 344588998887776653222 23334457
Q ss_pred CEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC-CeEEEEeCCCCceE
Q 045821 212 GKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG-TKLMMWQKESREWS 283 (352)
Q Consensus 212 g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~-~~v~~yd~~~~~W~ 283 (352)
|+..++++... .....++.+|..+.+++.+.... ......+..-+|+.++.+...+ ..++++|.++++..
T Consensus 161 G~~la~~~~~~-~~~~~i~~~d~~~g~~~~l~~~~-~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 161 GDLIAGLGFFG-GGRVSLFTSNLSSGGLRVFDSGE-GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp TTEEEEEEEEE-TTEEEEEEEETTTCCCEEECCSS-CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCEEEEEEEcC-CCCeEEEEEcCCCCCceEeecCC-CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 76655543332 22246999999988888774321 1111122334666554444333 47999999998877
No 258
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=91.95 E-value=2.5 Score=36.91 Aligned_cols=66 Identities=8% Similarity=-0.076 Sum_probs=33.4
Q ss_pred EEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECC-EEEEEeCCCCCCCCCCeEEEEECC-CCeeE
Q 045821 74 FCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGK-NAYLLGGCGWSEDATSEVYCYDAS-MNTWT 149 (352)
Q Consensus 74 ~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~-t~~W~ 149 (352)
+|+....+....+.+|+ .++..+.+...+........+....-++ .+|+... . .+.+||.. +++..
T Consensus 7 vg~~~~~~~i~~~~~d~--~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~-----~---~v~~~~~~~~g~~~ 74 (365)
T 1jof_A 7 IGTWTPPGAIFTVQFDD--EKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-----K---KWSSFAVKSPTEIV 74 (365)
T ss_dssp EEESSSSCEEEEEEEET--TTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-----T---EEEEEEEEETTEEE
T ss_pred EEEccCCCcEEEEEEEC--CCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc-----c---eEEEEEECCCCCEE
Confidence 45553333456677788 8888776654210001112222222244 4665542 1 67888875 66543
No 259
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.91 E-value=3.5 Score=40.14 Aligned_cols=146 Identities=9% Similarity=0.053 Sum_probs=82.1
Q ss_pred CCeEEEEECCCC--e-eEecCCCCCcceeeeeEEECCEEEEEeCCCCC-CceEEEeCCC--CcEEEecCCCCcccceeEE
Q 045821 135 TSEVYCYDASMN--T-WTDAAPMSTARCYFPCGVLNQKIYCIGGLGDT-HSWDVYDPRT--NNWKLHTEPNIFTEIEDSF 208 (352)
Q Consensus 135 ~~~~~~~d~~t~--~-W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~-~~v~~yd~~t--~~W~~~~~~~~~~~~~~~~ 208 (352)
.++++++|..+. + ++.+.......... ....++.+|+....+.. ..++.+|..+ ..|+.+-+-... ......
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~ 370 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVG 370 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEE
Confidence 568889998876 6 77765433222222 23456788887654432 6789999887 579887532221 122234
Q ss_pred EECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEE--ECC-EEEEEe-cCCC-CeEEEEeCCCCceE
Q 045821 209 VMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVV--VDD-ALYVLD-QSSG-TKLMMWQKESREWS 283 (352)
Q Consensus 209 ~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~-~l~~~g-g~~~-~~v~~yd~~~~~W~ 283 (352)
..++++++....+ ....++.+|.....-..+..+. ......+. -++ .|++.. +... ..++.||..+++.+
T Consensus 371 ~~~~~lv~~~~~d---g~~~l~~~~~~g~~~~~l~~~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 371 IAGNRLFASYIHD---AKSQVLAFDLDGKPAGAVSLPG--IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp EEBTEEEEEEEET---TEEEEEEEETTSCEEEECBCSS--SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred EECCEEEEEEEEC---CEEEEEEEeCCCCceeeccCCC--CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 4478887774332 2346888887555444443211 11111121 133 354432 2221 47999999998877
Q ss_pred EccC
Q 045821 284 PVGR 287 (352)
Q Consensus 284 ~~~~ 287 (352)
.+..
T Consensus 446 ~l~~ 449 (741)
T 1yr2_A 446 PWEP 449 (741)
T ss_dssp ECSC
T ss_pred EEec
Confidence 6654
No 260
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=91.90 E-value=4 Score=32.47 Aligned_cols=142 Identities=10% Similarity=0.066 Sum_probs=76.6
Q ss_pred EEEECCEEEEEeCCCCCCCCCCeEEEEECCC---CeeEec----CCCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEE
Q 045821 115 FEVLGKNAYLLGGCGWSEDATSEVYCYDASM---NTWTDA----APMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVY 185 (352)
Q Consensus 115 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t---~~W~~~----~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~y 185 (352)
+..+.+++|+|-| ..+|+++... +-=..+ +.+|. ...++. .++++|++-| +.+++|
T Consensus 11 ~~~~~g~~~fFkg--------~~~w~~~~~~~~~gyP~~I~~~w~glP~---~iDAa~~~~~g~~yfFkg----~~yw~~ 75 (196)
T 3c7x_A 11 VAMLRGEMFVFKE--------RWFWRVRNNQVMDGYPMPIGQFWRGLPA---SINTAYERKDGKFVFFKG----DKHWVF 75 (196)
T ss_dssp EEEETTEEEEEET--------TEEEEEETTEECTTCSEEHHHHSTTCCS---SCCEEEECTTSCEEEEET----TEEEEE
T ss_pred EEEcCCEEEEEEC--------CEEEEEECCccCCCCceEhhHhccCCCC---CccEEEEeCCCcEEEecC----CEEEEE
Confidence 4467899999987 5567775431 000111 12232 222232 3688999998 778999
Q ss_pred eCCCCc---EEEecCCC--Cc-ccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceee-----cCCCCCCCCC-
Q 045821 186 DPRTNN---WKLHTEPN--IF-TEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLH-----ADANMASGWR- 251 (352)
Q Consensus 186 d~~t~~---W~~~~~~~--~~-~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-----~~~~~~~~~~- 251 (352)
+..+.. =+.|...- .+ ....++... ++++|.+-|.. .++||..+++-.. +..-+..+..
T Consensus 76 ~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~~-------yw~yd~~~~~v~~gyPk~i~~~~gip~~i 148 (196)
T 3c7x_A 76 DEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGNK-------YYRFNEELRAVDSEYPKNIKVWEGIPESP 148 (196)
T ss_dssp ETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETTE-------EEEEETTTTEECTTCSEEGGGSBTCCSSC
T ss_pred eCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECCE-------EEEEeCCcccccCCCCccHHHCCCcCCCc
Confidence 864321 01222211 11 112234433 68999995543 7899987653221 1100011111
Q ss_pred CcEEEE-CC-EEEEEecCCCCeEEEEeCCCCc
Q 045821 252 GPAVVV-DD-ALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 252 ~~~~~~-~~-~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
-+++.. ++ ++|++-|. ..++||..+++
T Consensus 149 daAf~~~~~~~~YfFkg~---~y~r~d~~~~~ 177 (196)
T 3c7x_A 149 RGSFMGSDEVFTYFYKGN---KYWKFNNQKLK 177 (196)
T ss_dssp SEEEECTTSSEEEEEETT---EEEEEETTTTE
T ss_pred ceeEEecCCCEEEEEECC---EEEEEECCcce
Confidence 123333 44 89999886 89999988764
No 261
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=91.74 E-value=5.2 Score=33.48 Aligned_cols=228 Identities=12% Similarity=0.041 Sum_probs=104.3
Q ss_pred EEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCCCCCCCCeEEEEECCCCeeE
Q 045821 71 IYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGWSEDATSEVYCYDASMNTWT 149 (352)
Q Consensus 71 l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~ 149 (352)
++++|.. + .+.++|. .++.....-.+.. ....-.+++.. ++..++.|+.+ ..+.+||..+++-.
T Consensus 38 ~lAvg~D---~--tV~iWd~--~tg~~~~~~~~~~--~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 38 VLAVALD---N--SVYLWSA--SSGDILQLLQMEQ--PGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRL 102 (318)
T ss_dssp EEEEEET---T--EEEEEET--TTCCEEEEEECCS--TTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred EEEEEeC---C--EEEEEEC--CCCCEEEEEEecC--CCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeE
Confidence 5566542 3 3455588 7777655444331 11111222222 55666677643 46888999888643
Q ss_pred ecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecC-CCCcccceeEEEECCEEEEEccCCCCCCceE
Q 045821 150 DAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE-PNIFTEIEDSFVMDGKIYIRCSASAATSHVC 228 (352)
Q Consensus 150 ~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~-~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~ 228 (352)
........+ ......++.+.+.|+.+ ..+..++..+........ .............+++.++.|+.++ .
T Consensus 103 ~~~~~h~~~--~~~~~~~~~~l~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~ 173 (318)
T 4ggc_A 103 RNMTSHSAR--VGSLSWNSYILSSGSRS--GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-----L 173 (318)
T ss_dssp EEEECCSSC--EEEEEEETTEEEEEETT--SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----C
T ss_pred EEecCccce--EEEeecCCCEEEEEecC--CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-----c
Confidence 221111111 12223344555555544 445556555543322110 1111111122233566666655543 4
Q ss_pred EEEEeCCCCceeecCCCCCCCCCCc--EEE---ECC-EEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEe
Q 045821 229 ALVYEPSTDSWLHADANMASGWRGP--AVV---VDD-ALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAI 302 (352)
Q Consensus 229 i~~yd~~~~~W~~~~~~~~~~~~~~--~~~---~~~-~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 302 (352)
+..||..+.+-.............. .+. .++ .+.+.+|.....+.+||.....-......... .........
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~--v~~~~~~~~ 251 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ--VCSILWSPH 251 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC--EEEEEEETT
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee--eeeeeeccc
Confidence 6777876543221111001111111 111 123 34444555445888999887765544322221 111222233
Q ss_pred CCEEEEEcCC-c-eEEEEEcCCcc
Q 045821 303 GKTIFVIGKG-C-SAVVIDVGNIG 324 (352)
Q Consensus 303 ~~~i~v~gG~-~-~~~~~d~~~~~ 324 (352)
++.+++.+|. + .+.+||..+..
T Consensus 252 ~~~~~~~sg~~d~~i~iwd~~~~~ 275 (318)
T 4ggc_A 252 YKELISGHGFAQNQLVIWKYPTMA 275 (318)
T ss_dssp TTEEEEEECTTTCCEEEEETTTCC
T ss_pred ccceEEEEEcCCCEEEEEECCCCc
Confidence 5666666553 2 46689987654
No 262
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.73 E-value=12 Score=37.85 Aligned_cols=191 Identities=9% Similarity=-0.028 Sum_probs=93.7
Q ss_pred CEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCee
Q 045821 69 TWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTW 148 (352)
Q Consensus 69 ~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W 148 (352)
+.+++.+. ..+...+|.++. .+.....+.... .........++..++++. ...++.+|..+.+.
T Consensus 214 d~l~~~~~--~dg~~~l~~~~~--~g~~~~~l~~~~-----~~~~~~~SpDG~~la~~~-------~~~i~~~d~~~~~l 277 (1045)
T 1k32_A 214 HRIYFITD--IDGFGQIYSTDL--DGKDLRKHTSFT-----DYYPRHLNTDGRRILFSK-------GGSIYIFNPDTEKI 277 (1045)
T ss_dssp TEEEEEEC--TTSSCEEEEEET--TSCSCEECCCCC-----SSCEEEEEESSSCEEEEE-------TTEEEEECTTTCCE
T ss_pred CEEEEEEe--ccCceEEEEEeC--CCCcceEecCCC-----CcceeeEcCCCCEEEEEe-------CCEEEEecCCceEe
Confidence 34554433 224456777776 555544444322 111223334555444431 24678888755544
Q ss_pred EecCCCCC----------cceeeeeEE-ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEE
Q 045821 149 TDAAPMST----------ARCYFPCGV-LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIR 217 (352)
Q Consensus 149 ~~~~~~~~----------~r~~~~~~~-~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~ 217 (352)
..+..-.. ......... -+++..+++. ...++.++..+..-..+...+.......+.. +|+.+++
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~ 353 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS---RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIH 353 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE---TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEE
T ss_pred eeeccCcccccccccccccccceeeecCCCCCEEEEEE---cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEE
Confidence 43332100 011111122 2443223332 1567888888776655432221111222233 6654444
Q ss_pred ccCCCCCCceEEE-EEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEcc
Q 045821 218 CSASAATSHVCAL-VYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVG 286 (352)
Q Consensus 218 GG~~~~~~~~~i~-~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~ 286 (352)
++. ...++ .+|..+.+-..+.. ........+..-+++.++++...+ .+++||..+++-..+.
T Consensus 354 ~s~-----~~~l~~~~d~~~~~~~~l~~-~~~~~~~~~~SpDG~~la~~~~~~-~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 354 GTR-----EGDFLGIYDYRTGKAEKFEE-NLGNVFAMGVDRNGKFAVVANDRF-EIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EET-----TEEEEEEEETTTCCEEECCC-CCCSEEEEEECTTSSEEEEEETTS-EEEEEETTTCCEEEEE
T ss_pred EEC-----CCceEEEEECCCCCceEecC-CccceeeeEECCCCCEEEEECCCC-eEEEEECCCCceEEec
Confidence 332 24788 89988877666541 111111112233666666665554 8999999988876664
No 263
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.62 E-value=5.7 Score=33.76 Aligned_cols=185 Identities=6% Similarity=-0.023 Sum_probs=83.0
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-------CCEEEEEeCCCCCCceEEEeCCCCc
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-------NQKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-------~~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
++.+++.|+.+ ..+.+||.....-..+......- ..+... ++..++.|+.+ ..+..||..+.+
T Consensus 118 ~~~~l~s~s~D------~~i~vwd~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~~~~~l~s~~~d--~~i~~wd~~~~~ 187 (319)
T 3frx_A 118 KASMIISGSRD------KTIKVWTIKGQCLATLLGHNDWV--SQVRVVPNEKADDDSVTIISAGND--KMVKAWNLNQFQ 187 (319)
T ss_dssp TSCEEEEEETT------SCEEEEETTSCEEEEECCCSSCE--EEEEECCC------CCEEEEEETT--SCEEEEETTTTE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCeEEEEeccCCcE--EEEEEccCCCCCCCccEEEEEeCC--CEEEEEECCcch
Confidence 45566666543 34777887655433332111110 111111 23355556554 678899988765
Q ss_pred EEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCCCCCCCcEEEECCEEEEEecCCCC
Q 045821 192 WKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMASGWRGPAVVVDDALYVLDQSSGT 270 (352)
Q Consensus 192 W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~l~~~gg~~~~ 270 (352)
-...-.-........+..-++++++.|+.++ .+..||..+.+-.. +.. .......+...++.++..+...
T Consensus 188 ~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~~la~~~~~-- 258 (319)
T 3frx_A 188 IEADFIGHNSNINTLTASPDGTLIASAGKDG-----EIMLWNLAAKKAMYTLSA--QDEVFSLAFSPNRYWLAAATAT-- 258 (319)
T ss_dssp EEEEECCCCSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTTEEEEEEEC--CSCEEEEEECSSSSEEEEEETT--
T ss_pred hheeecCCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEecC--CCcEEEEEEcCCCCEEEEEcCC--
Confidence 3321110111111112223677777766553 57788887654321 111 0110111122355555554433
Q ss_pred eEEEEeCCCCce-EEccC-CCCCc---CCCCceE-EEeCCEEEEEcCCce-EEEEEcCC
Q 045821 271 KLMMWQKESREW-SPVGR-LSTLL---TRPPCKL-VAIGKTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 271 ~v~~yd~~~~~W-~~~~~-~~~~~---~~~~~~~-~~~~~~i~v~gG~~~-~~~~d~~~ 322 (352)
.+.+|+.+...- ..+.. ..... .....++ ...+++.++.|+.+. +.++|+.+
T Consensus 259 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 259 GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 577777665432 22211 11000 0011122 224667777776664 55777654
No 264
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=91.37 E-value=5 Score=32.54 Aligned_cols=138 Identities=12% Similarity=0.163 Sum_probs=75.5
Q ss_pred ECCEEEEEeCCCCCCceEEEeCCCCcE--EEecC-CCC-cccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceee
Q 045821 166 LNQKIYCIGGLGDTHSWDVYDPRTNNW--KLHTE-PNI-FTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLH 241 (352)
Q Consensus 166 ~~~~iyv~gG~~~~~~v~~yd~~t~~W--~~~~~-~~~-~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~ 241 (352)
.++++|++-| ..+++++...... ..|.. .+. +...-++...+|++|++-|.. +|+|+..++. +.
T Consensus 27 ~~g~~yfFkg----~~~Wr~~~~~~~~~p~~Is~~wpgLP~~IDAA~~~~~~~yfFkG~~-------yw~~~~~~~~-~~ 94 (219)
T 1hxn_A 27 NHGATYVFSG----SHYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAFSWEDKLYLIQDTK-------VYVFLTKGGY-TL 94 (219)
T ss_dssp TTSCEEEEET----TEEEESSSSSCTTCCEEGGGTCTTSCSSCSEEEEETTEEEEEETTE-------EEEEECSSSC-EE
T ss_pred CCCcEEEEeC----CEEEEEcCCCCCCCceEhhhhccCCCCCccEEEEECCcEEEecCCE-------EEEEeCCCCc-ee
Confidence 4789999998 6788887654322 22221 111 122234556699999995543 8899865321 11
Q ss_pred cCC---------CCCCC--C-CCcEEE---ECCEEEEEecCCCCeEEEEeCCC---CceEEccCCCCCcCCCCceEEE--
Q 045821 242 ADA---------NMASG--W-RGPAVV---VDDALYVLDQSSGTKLMMWQKES---REWSPVGRLSTLLTRPPCKLVA-- 301 (352)
Q Consensus 242 ~~~---------~~~~~--~-~~~~~~---~~~~l~~~gg~~~~~v~~yd~~~---~~W~~~~~~~~~~~~~~~~~~~-- 301 (352)
.+. ..+.. . .--++. .++++|++-|. ..|+||..+ ..|...+.+|. ....++..
T Consensus 95 ~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~---~ywr~d~~~~P~~i~~~~~g~p~---~vdAa~~~~~ 168 (219)
T 1hxn_A 95 VNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR---RLWWLDLKSGAQATWTELPWPHE---KVDGALCMEK 168 (219)
T ss_dssp CTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT---EEEEEEGGGGGGCCCEEECCSCS---CCSEEEEESS
T ss_pred cCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC---EEEEEeCCCCceEhhhcCCCCCC---CcCEEEEccc
Confidence 110 01111 0 122332 26899999886 789999764 23433333322 22233331
Q ss_pred ---------eCCEEEEEcCCceEEEEEcCC
Q 045821 302 ---------IGKTIFVIGKGCSAVVIDVGN 322 (352)
Q Consensus 302 ---------~~~~i~v~gG~~~~~~~d~~~ 322 (352)
.++.+|++-|. ..+-||..+
T Consensus 169 ~~~~~~~~~~~~~~YFFkg~-~y~r~~~~~ 197 (219)
T 1hxn_A 169 PLGPNSCSTSGPNLYLIHGP-NLYCYRHVD 197 (219)
T ss_dssp CSSSCCSCSSSCEEEEEETT-EEEEESSHH
T ss_pred cccccceeccCCeEEEEECC-EEEEEeCCc
Confidence 35689999886 355566543
No 265
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=91.32 E-value=5 Score=32.49 Aligned_cols=144 Identities=12% Similarity=0.091 Sum_probs=76.9
Q ss_pred EEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCe-e--EecC----CCCCcceeeeeEEE--CCEEEEEeCCCCCCceEE
Q 045821 114 GFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNT-W--TDAA----PMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDV 184 (352)
Q Consensus 114 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W--~~~~----~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~ 184 (352)
++....+++|+|-| ..+|+++..... . ..+. .+|. .. -++... ++++|++-| +.+++
T Consensus 35 Ai~~~~g~~~fFkg--------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~I-DAA~~~~~~~k~yfFkG----~~yW~ 100 (218)
T 1gen_A 35 GIAQIRGEIFFFKD--------RFIWRTVTPRDKPMGPLLVATFWPELPE-KI-DAVYEAPQEEKAVFFAG----NEYWI 100 (218)
T ss_dssp EEEEETTEEEEEET--------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CC-SEEEEETTTTEEEEEET----TEEEE
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCCccCCCEEHHHhcCCCCC-Cc-cEEEEECCCCEEEEEeC----CEEEE
Confidence 45567999999977 445665544311 1 1121 2221 11 122222 589999999 78899
Q ss_pred EeCCCCc---EEEecC--CCCcc-cceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeec-----CC-CCC-CC
Q 045821 185 YDPRTNN---WKLHTE--PNIFT-EIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-----DA-NMA-SG 249 (352)
Q Consensus 185 yd~~t~~---W~~~~~--~~~~~-~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-----~~-~~~-~~ 249 (352)
||..+-. =+.|.. .|... ...+++. .++++|++-|.. .|+||..+++-..- .. -+. +.
T Consensus 101 y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~~-------ywr~d~~~~~v~~gyPr~i~~~w~g~p~ 173 (218)
T 1gen_A 101 YSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDK-------FWRYNEVKKKMDPGFPKLIADAWNAIPD 173 (218)
T ss_dssp EETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETTE-------EEEEETTTTEECSSCCEEHHHHSSSCCS
T ss_pred EcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECCE-------EEEEECccccccCCCCcchhhccCCCCC
Confidence 9853210 011221 11111 1223343 268999996543 89999876542211 00 001 11
Q ss_pred CCCcEEEEC--CEEEEEecCCCCeEEEEeCCCCc
Q 045821 250 WRGPAVVVD--DALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 250 ~~~~~~~~~--~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
..-+++..+ +.+|++-|. ..++||..+..
T Consensus 174 ~idaAf~~~~~g~~YfFkg~---~y~~~~~~~~~ 204 (218)
T 1gen_A 174 NLDAVVDLQGGGHSYFFKGA---YYLKLENQSLK 204 (218)
T ss_dssp SCSEEEECTTTCEEEEEETT---EEEEEETTEEE
T ss_pred CCCEEEEEcCCCcEEEEECC---EEEEEECCcee
Confidence 112233433 899999876 89999987654
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.22 E-value=10 Score=35.80 Aligned_cols=116 Identities=14% Similarity=0.160 Sum_probs=67.6
Q ss_pred EEECCEEEEEeCCCCCCCCCCeEEEEECCCCe--eEecCCCCCc---c---eeeeeEEECCEEEEEeCCCCCCceEEEeC
Q 045821 116 EVLGKNAYLLGGCGWSEDATSEVYCYDASMNT--WTDAAPMSTA---R---CYFPCGVLNQKIYCIGGLGDTHSWDVYDP 187 (352)
Q Consensus 116 ~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~--W~~~~~~~~~---r---~~~~~~~~~~~iyv~gG~~~~~~v~~yd~ 187 (352)
++.++.||+.... ..++.+|..|++ |+.-...+.. . .....++.+++||+.... ..+..+|.
T Consensus 65 ~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d---g~l~AlD~ 134 (582)
T 1flg_A 65 IVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD---ASVVALNK 134 (582)
T ss_dssp EEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT---TEEEEEES
T ss_pred EEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC---CEEEEEEC
Confidence 5679999998642 348999998876 8765433211 1 123455678999986432 57899999
Q ss_pred CCCc--EEEecCCCCcc--cceeEEEECC------EEEEEccCCCCCCceEEEEEeCCCCc--eee
Q 045821 188 RTNN--WKLHTEPNIFT--EIEDSFVMDG------KIYIRCSASAATSHVCALVYEPSTDS--WLH 241 (352)
Q Consensus 188 ~t~~--W~~~~~~~~~~--~~~~~~~~~g------~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~ 241 (352)
.|.+ |+.-...+... ....-++.++ .+|+-....+......+..||..+.+ |+.
T Consensus 135 ~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 135 NTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp SSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 8875 87643211111 1112244555 66653211111122378999987664 864
No 267
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.22 E-value=6.9 Score=33.92 Aligned_cols=183 Identities=9% Similarity=-0.021 Sum_probs=85.6
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEP 198 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~ 198 (352)
++.+.+.|+.+ ..+.+||..+++-...-..+.+ -.++....+.+++... ..+.+||..+.. +.+...
T Consensus 70 ~~~~~~~~~~d------~~v~iWd~~~~~~~~~~~~~~~--v~~v~~~~~~~~~~~~----~~i~i~d~~~~~-~~~~~~ 136 (355)
T 3vu4_A 70 TNYVAFVTGVK------EVVHIWDDVKKQDVSRIKVDAP--VKDLFLSREFIVVSYG----DVISVFKFGNPW-KRITDD 136 (355)
T ss_dssp SSEEEEECSST------TEEEEEETTTTEEEEEEECSSC--EEEEEECSSEEEEEET----TEEEEEESSTTC-CBSSCC
T ss_pred CCEEEEEECCc------cEEEEEECCCCcEEEEEECCCc--eEEEEEcCCEEEEEEc----CEEEEEECCCCc-eeeEEe
Confidence 34555666532 3788999988864322112221 1122222445555443 678899988761 122211
Q ss_pred CCcccceeEEEECCEEEEE-ccCCCCCCceEEEEEeCCCCc-eeecCC----------CCCCCCC-Cc--EE--EECCEE
Q 045821 199 NIFTEIEDSFVMDGKIYIR-CSASAATSHVCALVYEPSTDS-WLHADA----------NMASGWR-GP--AV--VVDDAL 261 (352)
Q Consensus 199 ~~~~~~~~~~~~~g~iyv~-GG~~~~~~~~~i~~yd~~~~~-W~~~~~----------~~~~~~~-~~--~~--~~~~~l 261 (352)
.. .. ...+...+.+.+. |+..+ .+..||..+.. +..... ......+ .. .+ ..++++
T Consensus 137 ~~-~~-~~~~~s~~~la~~sg~~~g-----~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~ 209 (355)
T 3vu4_A 137 IR-FG-GVCEFSNGLLVYSNEFNLG-----QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM 209 (355)
T ss_dssp EE-EE-EEEEEETTEEEEEESSCTT-----CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred cc-CC-ceEEEEccEEEEeCCCcCc-----EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence 11 11 1122223444343 33322 47778876543 111000 0000011 11 12 236778
Q ss_pred EEEecCCCCe-EEEEeCCCCceEE-ccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 262 YVLDQSSGTK-LMMWQKESREWSP-VGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 262 ~~~gg~~~~~-v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
++.|+.++ . +.+||..+.+-.. +..-.. ...-.++. ..+++.++.|+.+ .+.++|++...
T Consensus 210 l~s~s~d~-~~v~iwd~~~~~~~~~~~~g~h--~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 210 VATCSQDG-TIIRVFKTEDGVLVREFRRGLD--RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEETTC-SEEEEEETTTCCEEEEEECTTC--CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEEEeCCC-CEEEEEECCCCcEEEEEEcCCC--CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 88888776 6 9999998765332 210001 11112222 2356666666655 46689987654
No 268
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=91.15 E-value=8.6 Score=34.92 Aligned_cols=29 Identities=7% Similarity=-0.029 Sum_probs=17.7
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCe
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNT 147 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~ 147 (352)
-++ |||..-.+........+.++|..|.+
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 355 77753211122445789999999876
No 269
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.14 E-value=10 Score=36.81 Aligned_cols=164 Identities=11% Similarity=0.044 Sum_probs=86.4
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCC--C-eeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRR--S-WKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDAS 144 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~--~-w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 144 (352)
+.+|++...........++.+|. .+. . +..+.... ... ...+...++.+|+....+ .....++.+|..
T Consensus 279 G~~l~~~~~~~~~~~~~l~~~d~--~~~~~~~~~~l~~~~---~~~-~~~~~~dg~~l~~~s~~~---~~~~~l~~~d~~ 349 (741)
T 1yr2_A 279 GRWVVITSSEGTDPVNTVHVARV--TNGKIGPVTALIPDL---KAQ-WDFVDGVGDQLWFVSGDG---APLKKIVRVDLS 349 (741)
T ss_dssp SCEEEEEEECTTCSCCEEEEEEE--ETTEECCCEEEECSS---SSC-EEEEEEETTEEEEEECTT---CTTCEEEEEECS
T ss_pred CCEEEEEEEccCCCcceEEEEEC--CCCCCcccEEecCCC---Cce-EEEEeccCCEEEEEECCC---CCCCEEEEEeCC
Confidence 33455444332223456777787 665 6 77776433 111 222334567788775432 235679999988
Q ss_pred C--CeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeE-EEECC-EEEEEccC
Q 045821 145 M--NTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDS-FVMDG-KIYIRCSA 220 (352)
Q Consensus 145 t--~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~-~~~~g-~iyv~GG~ 220 (352)
+ ..|+.+-+-... ........++.+++....+....++.+|.....-+.+. .+........ ..-++ .|++...
T Consensus 350 ~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~s- 426 (741)
T 1yr2_A 350 GSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVS-LPGIGSASGLSGRPGDRHAYLSFS- 426 (741)
T ss_dssp SSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECB-CSSSCEEEEEECCBTCSCEEEEEE-
T ss_pred CCccccEEEecCCCC-eEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeecc-CCCCeEEEEeecCCCCCEEEEEEc-
Confidence 7 578876432221 11223334778877765443367888887655444443 2211111111 11233 3444321
Q ss_pred CCCCCceEEEEEeCCCCceeecCC
Q 045821 221 SAATSHVCALVYEPSTDSWLHADA 244 (352)
Q Consensus 221 ~~~~~~~~i~~yd~~~~~W~~~~~ 244 (352)
+......++.||..+++.+.+..
T Consensus 427 -s~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 427 -SFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp -ETTEEEEEEEEETTTTEEEECSC
T ss_pred -CCCCCCEEEEEECCCCcEEEEec
Confidence 11223478999998888766643
No 270
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.07 E-value=11 Score=36.17 Aligned_cols=195 Identities=5% Similarity=-0.094 Sum_probs=98.3
Q ss_pred ceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCE-EEEEeCCCCC---------CCCCCeEEEEECCCCeeE-
Q 045821 82 RVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKN-AYLLGGCGWS---------EDATSEVYCYDASMNTWT- 149 (352)
Q Consensus 82 ~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~-iyv~GG~~~~---------~~~~~~~~~~d~~t~~W~- 149 (352)
...++++|. .++......... . .. ...+.. +++ ||........ ......+++++..+.+..
T Consensus 150 ~~~i~v~d~--~tg~~~~~~~~~---~-~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~ 222 (710)
T 2xdw_A 150 WVTIKFMKV--DGAKELPDVLER---V-KF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED 222 (710)
T ss_dssp CEEEEEEET--TTTEEEEEEEEE---E-CS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC
T ss_pred eEEEEEEEC--CCCCCCcccccC---c-cc-ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc
Confidence 346788888 887765532111 1 11 112222 444 4444321110 012456888998887632
Q ss_pred -ecCCCC-CcceeeeeEEE-CCE-EEEEeCCCC--CCceEEEeCCC------C--cEEEecCCCCcccceeEEEECCEEE
Q 045821 150 -DAAPMS-TARCYFPCGVL-NQK-IYCIGGLGD--THSWDVYDPRT------N--NWKLHTEPNIFTEIEDSFVMDGKIY 215 (352)
Q Consensus 150 -~~~~~~-~~r~~~~~~~~-~~~-iyv~gG~~~--~~~v~~yd~~t------~--~W~~~~~~~~~~~~~~~~~~~g~iy 215 (352)
.+...+ .+......... +++ |++...... ...++++|..+ . .++.+....... ......-++.||
T Consensus 223 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~ 301 (710)
T 2xdw_A 223 ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFT 301 (710)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEE
T ss_pred eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEE
Confidence 221211 12222222222 444 444433221 27888999876 4 577776432222 122233466788
Q ss_pred EEccCCCCCCceEEEEEeCCCC---ceeecCCCCCCCCCCcEEEE-CCEEEEEecCCC-CeEEEEeCCCCc-eEEcc
Q 045821 216 IRCSASAATSHVCALVYEPSTD---SWLHADANMASGWRGPAVVV-DDALYVLDQSSG-TKLMMWQKESRE-WSPVG 286 (352)
Q Consensus 216 v~GG~~~~~~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~~-~~~l~~~gg~~~-~~v~~yd~~~~~-W~~~~ 286 (352)
+.+... .....++.+|..+. .|+.+............... ++.+++.....+ ..++++|+.+++ ..++.
T Consensus 302 ~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 302 FKTNRH--SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp EEECTT--CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred EEECCC--CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence 875332 22347889998765 58877442221111112334 778877765554 468999985544 44543
No 271
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.00 E-value=6.5 Score=37.08 Aligned_cols=114 Identities=15% Similarity=0.226 Sum_probs=67.1
Q ss_pred eeeEEECCEEEEEeCCCCCCceEEEeCCCCc--EEEecCCCCcc------cceeEEEECCEEEEEccCCCCCCceEEEEE
Q 045821 161 FPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN--WKLHTEPNIFT------EIEDSFVMDGKIYIRCSASAATSHVCALVY 232 (352)
Q Consensus 161 ~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~--W~~~~~~~~~~------~~~~~~~~~g~iyv~GG~~~~~~~~~i~~y 232 (352)
...++.++.||+.+... .+..+|..|.+ |+.-...+... .....++.+++||+... . ..++++
T Consensus 62 ~~P~v~~g~vyv~~~~~---~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-d-----g~l~Al 132 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS---RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-D-----ASVVAL 132 (582)
T ss_dssp CCCEEETTEEEEEETTT---EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-T-----TEEEEE
T ss_pred eccEEECCEEEEEcCCC---CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-C-----CEEEEE
Confidence 34566799999987642 38999998774 98754322211 01234567899988632 1 268999
Q ss_pred eCCCCc--eeecCCCCCC--CCCCcEEEECC------EEEEEec-----CCCCeEEEEeCCCCc--eEE
Q 045821 233 EPSTDS--WLHADANMAS--GWRGPAVVVDD------ALYVLDQ-----SSGTKLMMWQKESRE--WSP 284 (352)
Q Consensus 233 d~~~~~--W~~~~~~~~~--~~~~~~~~~~~------~l~~~gg-----~~~~~v~~yd~~~~~--W~~ 284 (352)
|..+.+ |+.-...... ......++.++ .+|+-.. .. ..++.||.++++ |+.
T Consensus 133 D~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~-g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 133 NKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVV-GRLFARDPDTGEEIWMR 200 (582)
T ss_dssp ESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCB-CEEEEECTTTCCEEEEE
T ss_pred ECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCC-CEEEEEECCCCCEEeec
Confidence 987764 8754322111 11222234455 5554321 12 389999998765 864
No 272
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=91.00 E-value=1.6 Score=35.69 Aligned_cols=142 Identities=8% Similarity=0.047 Sum_probs=75.3
Q ss_pred CCEEEEEeCCCCCCceEEEeCCC----CcEE----Eec----CCCCc---ccceeEEE--ECCEEEEEccCCCCCCceEE
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRT----NNWK----LHT----EPNIF---TEIEDSFV--MDGKIYIRCSASAATSHVCA 229 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t----~~W~----~~~----~~~~~---~~~~~~~~--~~g~iyv~GG~~~~~~~~~i 229 (352)
++.+|++-| ..+++++... +... .|. .+|.. .....++. .+|++|++-|.. +
T Consensus 15 ~ge~yfFkg----~~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg~~-------~ 83 (227)
T 3lp9_A 15 NNEAYFFIN----DKYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYENF-------C 83 (227)
T ss_dssp TTEEEEEET----TEEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEETTE-------E
T ss_pred CCeEEEEEC----CEEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeCCE-------E
Confidence 589999988 6678877621 1111 111 12111 12222232 589999996543 7
Q ss_pred EEEeCCC---------------CceeecCCCCCCCCCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEE-----cc-
Q 045821 230 LVYEPST---------------DSWLHADANMASGWRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSP-----VG- 286 (352)
Q Consensus 230 ~~yd~~~---------------~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~-----~~- 286 (352)
|+|+... ..|..++...-....-++... ++++|++-|. ..|+||..+++-.. +.
T Consensus 84 Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~---~yw~~d~~~~~~~~gyPk~i~~ 160 (227)
T 3lp9_A 84 ALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGD---QYARIDYGSNSMVNKEIKSISS 160 (227)
T ss_dssp EEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETT---EEEEEETTTTEESSSSCEEHHH
T ss_pred EEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECC---EEEEEeCCCccccCCCCeEHHH
Confidence 8887211 123333210001112223332 6899999886 89999987654211 11
Q ss_pred CCCCC----cCCCCceEEE--eCCEEEEEcCCceEEEEEcCCc
Q 045821 287 RLSTL----LTRPPCKLVA--IGKTIFVIGKGCSAVVIDVGNI 323 (352)
Q Consensus 287 ~~~~~----~~~~~~~~~~--~~~~i~v~gG~~~~~~~d~~~~ 323 (352)
.+|.. .+...-+++. .++++|+|-|. ..+-||..+.
T Consensus 161 g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~-~Ywr~d~~~~ 202 (227)
T 3lp9_A 161 GYPCFRNTIFESGADAAFASHKTNEVYFFKDD-HYARVKVTPX 202 (227)
T ss_dssp HCGGGTTSGGGGCCSEEEECSSTTEEEEEETT-EEEEEECCSS
T ss_pred CCCCccccccCCCccEEEEcCCCceEEEEECC-EEEEEECCcc
Confidence 12321 0122223333 46899999875 4666998876
No 273
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.98 E-value=6.6 Score=33.27 Aligned_cols=144 Identities=8% Similarity=-0.040 Sum_probs=72.8
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCc----EEEecCCCCcccceeEEEECCE-EEEEccCCCCCCceEEEEEeC-CCCcee
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNN----WKLHTEPNIFTEIEDSFVMDGK-IYIRCSASAATSHVCALVYEP-STDSWL 240 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~----W~~~~~~~~~~~~~~~~~~~g~-iyv~GG~~~~~~~~~i~~yd~-~~~~W~ 240 (352)
++..++.|+.+ ..+.+||..+.. -...... .......+..-+++ +++.|+.++ .+..||. .+.+-.
T Consensus 22 ~~~~l~~~~~d--~~v~iw~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~~~~ 93 (342)
T 1yfq_A 22 SKSLLLITSWD--GSLTVYKFDIQAKNVDLLQSLRY-KHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDLIGSPSFQ 93 (342)
T ss_dssp GGTEEEEEETT--SEEEEEEEETTTTEEEEEEEEEC-SSCEEEEEEEESSSEEEEEEETTS-----CEEEECSSSSSSEE
T ss_pred CCCEEEEEcCC--CeEEEEEeCCCCccccceeeeec-CCceEEEEECCCCCcEEEEEcCCC-----eEEEEEeccCCceE
Confidence 44555555544 577888887765 3322211 11111122333677 666666543 5888998 877765
Q ss_pred ecCCCCCCCCCCcEE-EECCEEEEEecCCCCeEEEEeCCCC---c----eEEccCCCCCcCCCCceEEEeCCEEEEEcCC
Q 045821 241 HADANMASGWRGPAV-VVDDALYVLDQSSGTKLMMWQKESR---E----WSPVGRLSTLLTRPPCKLVAIGKTIFVIGKG 312 (352)
Q Consensus 241 ~~~~~~~~~~~~~~~-~~~~~l~~~gg~~~~~v~~yd~~~~---~----W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~ 312 (352)
.+.... ....-..+ ...+.+++.++.++ .+.+||..+. . ...+..+.. .....++....+.+++.+..
T Consensus 94 ~~~~~~-~~~~v~~l~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~~~~~d 169 (342)
T 1yfq_A 94 ALTNNE-ANLGICRICKYGDDKLIAASWDG-LIEVIDPRNYGDGVIAVKNLNSNNTKV--KNKIFTMDTNSSRLIVGMNN 169 (342)
T ss_dssp ECBSCC-CCSCEEEEEEETTTEEEEEETTS-EEEEECHHHHTTBCEEEEESCSSSSSS--CCCEEEEEECSSEEEEEEST
T ss_pred eccccC-CCCceEEEEeCCCCEEEEEcCCC-eEEEEcccccccccccccCCeeeEEee--CCceEEEEecCCcEEEEeCC
Confidence 553310 11111112 22255666666665 8999987640 0 222222221 12223444445564444444
Q ss_pred ceEEEEEcCC
Q 045821 313 CSAVVIDVGN 322 (352)
Q Consensus 313 ~~~~~~d~~~ 322 (352)
..+.+||...
T Consensus 170 ~~i~i~d~~~ 179 (342)
T 1yfq_A 170 SQVQWFRLPL 179 (342)
T ss_dssp TEEEEEESSC
T ss_pred CeEEEEECCc
Confidence 4677899877
No 274
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.95 E-value=4.4 Score=36.03 Aligned_cols=94 Identities=12% Similarity=0.067 Sum_probs=55.8
Q ss_pred CceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE
Q 045821 180 HSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV 257 (352)
Q Consensus 180 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 257 (352)
+.|.++|..+++...+-........-.++. -+|++++.|+.++ .+..||..+++-..... .+......+..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~--~h~~~v~~~s~ 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMT--SHSARVGSLSW 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC--CCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEe--CCCCceEEEee
Confidence 678899999988765543322222222222 3678888876553 47888887765432211 11111223456
Q ss_pred CCEEEEEecCCCCeEEEEeCCCCc
Q 045821 258 DDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 258 ~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
++.+++.|+..+ .+..+|.....
T Consensus 198 ~~~~l~sgs~d~-~i~~~d~~~~~ 220 (420)
T 4gga_A 198 NSYILSSGSRSG-HIHHHDVRVAE 220 (420)
T ss_dssp ETTEEEEEETTS-EEEEEETTSSS
T ss_pred CCCEEEEEeCCC-ceeEeeecccc
Confidence 777777777666 88888877644
No 275
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=90.69 E-value=8.3 Score=33.95 Aligned_cols=146 Identities=8% Similarity=0.044 Sum_probs=80.1
Q ss_pred eeEEECCEEEEEeCCCCCCceEEEeCCCCcE--EEec----CCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEe
Q 045821 162 PCGVLNQKIYCIGGLGDTHSWDVYDPRTNNW--KLHT----EPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYE 233 (352)
Q Consensus 162 ~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W--~~~~----~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd 233 (352)
+++.+++++|++-| ..+++++.....- ..|. .+| ...-++... +|++|++-|.. .|+|+
T Consensus 185 Av~~~~g~~~fFkg----~~~Wr~~~~~~~~~p~~I~~~wpgLP--~~iDAa~~~~~~g~~~fFkg~~-------yWr~~ 251 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD----RFFWLKVSERPKTSVNLISSLWPTLP--SGIEAAYEIEARNQVFLFKDDK-------YWLIS 251 (365)
T ss_dssp CEEEETTEEEEEET----TEEEECCSSCCCCCEEEHHHHCSSCC--SSCCEEEEEGGGTEEEEEETTE-------EEECS
T ss_pred eEEEcCCeEEEEeC----CEEEEEcCCCccCCccchhhhccCCC--CCccEEEEecCCCEEEEEeCCE-------EEEEc
Confidence 45557999999998 6678887654321 1121 122 122234444 78999995543 78886
Q ss_pred CCCCc--e-eecCCC-CCCC--CCCcEEEE--CCEEEEEecCCCCeEEEEeCCCCceEE-----cc-CCCCCcCCCCceE
Q 045821 234 PSTDS--W-LHADAN-MASG--WRGPAVVV--DDALYVLDQSSGTKLMMWQKESREWSP-----VG-RLSTLLTRPPCKL 299 (352)
Q Consensus 234 ~~~~~--W-~~~~~~-~~~~--~~~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~-----~~-~~~~~~~~~~~~~ 299 (352)
..... + ..+... .+.. .--+++.. ++++|++-|. ..|+||..+++-.. +. ..|. .+...-++
T Consensus 252 ~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~---~yw~yd~~~~~v~~gyPk~I~~~f~g-~p~~iDaA 327 (365)
T 3ba0_A 252 NLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN---QYWRYDERRQMMDPGYPKLITKNFQG-IGPKIDAV 327 (365)
T ss_dssp TTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT---EEEEEETTTTEECSSCCCCHHHHSTT-CCSSCSEE
T ss_pred CCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC---EEEEEeCCcceecCCCCcchhhcCCC-CCCcccee
Confidence 53211 1 122211 1110 11123333 5899999885 89999987654321 10 0111 11222334
Q ss_pred EEe-CCEEEEEcCCceEEEEEcCCccc
Q 045821 300 VAI-GKTIFVIGKGCSAVVIDVGNIGN 325 (352)
Q Consensus 300 ~~~-~~~i~v~gG~~~~~~~d~~~~~w 325 (352)
+.. ++++|.|-|. ..+-||..+.+-
T Consensus 328 ~~~~~g~~YfFkg~-~ywr~d~~~~~v 353 (365)
T 3ba0_A 328 FYSKNKYYYFFQGS-NQFEYDFLLQRI 353 (365)
T ss_dssp EEETTTEEEEEETT-EEEEEETTTTEE
T ss_pred eEecCCcEEEEeCC-EEEEEECCccEE
Confidence 444 8899999875 566799877553
No 276
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=90.68 E-value=10 Score=35.00 Aligned_cols=181 Identities=8% Similarity=0.056 Sum_probs=85.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.++.+ ..+.++|.....-..+.....+ . .+++.. +++..+.|+.+ ..+.+||.....-..+..
T Consensus 314 ~~~~l~t~~~d------~~i~~w~~~~~~~~~~~~~~~~-v-~~~~~s~~g~~l~~~~~d--g~v~~~~~~~~~~~~~~~ 383 (577)
T 2ymu_A 314 DGQTIASASDD------KTVKLWNRNGQHLQTLTGHSSS-V-WGVAFSPDGQTIASASDD--KTVKLWNRNGQLLQTLTG 383 (577)
T ss_dssp TSSEEEEEETT------SCEEEEETTSCEEEEECCCSSC-E-EEEEECTTSSEEEEEETT--SEEEEEETTCCEEEEEEC
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeEEEeCCCCC-E-EEEEECCCCCEEEEEeCC--CEEEEEcCCCCEEEEecC
Confidence 44455555432 3466778766654444322211 1 122222 56666666644 567888865544443332
Q ss_pred CCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeC
Q 045821 198 PNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 198 ~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~ 277 (352)
... .-...++.-+++.++.|+.++ .+..||.....-..+... .......++.-+++.++.++.++ .+.+||.
T Consensus 384 ~~~-~v~~~~~s~dg~~l~~~~~d~-----~v~~~~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~~~~~d~-~v~~w~~ 455 (577)
T 2ymu_A 384 HSS-SVRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQTLTGH-SSSVWGVAFSPDDQTIASASDDK-TVKLWNR 455 (577)
T ss_dssp CSS-CEEEEEECTTSSCEEEEETTS-----EEEEECTTCCEEEEEECC-SSCEEEEEECTTSSEEEEEETTS-EEEEEET
T ss_pred CCC-CeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCCEEEEecCC-CCCeEEEEECCCCCEEEEEcCCC-EEEEEEC
Confidence 111 111112223667666655442 567777644333332211 11101111223667777776665 8999998
Q ss_pred CCCceEEccCCCCCcCCCCceE-EEeCCEEEEEcCCce-EEEEEcC
Q 045821 278 ESREWSPVGRLSTLLTRPPCKL-VAIGKTIFVIGKGCS-AVVIDVG 321 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~~~~~~~~-~~~~~~i~v~gG~~~-~~~~d~~ 321 (352)
....-..+..... ...++ ...++++++.++.+. +.++|..
T Consensus 456 ~~~~~~~~~~~~~----~v~~~~~spd~~~las~~~d~~i~iw~~~ 497 (577)
T 2ymu_A 456 NGQLLQTLTGHSS----SVRGVAFSPDGQTIASASDDKTVKLWNRN 497 (577)
T ss_dssp TSCEEEEEECCSS----CEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCCEEEEEcCC
Confidence 7655544432211 11112 223566666655543 4467743
No 277
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=90.51 E-value=8.9 Score=33.99 Aligned_cols=148 Identities=12% Similarity=0.058 Sum_probs=75.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEe-cCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTD-AAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~-~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
++.+++.|+. ...+.+||..+.+-.. +...+. ...-..+.+ ++..++.|+.+ ..+.+||..+.+....
T Consensus 181 ~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 181 EKSLLVALTN------LSRVIIFDIRTLERLQIIENSPR-HGAVSSICIDEECCVLILGTTR--GIIDIWDIRFNVLIRS 251 (437)
T ss_dssp SCEEEEEEET------TSEEEEEETTTCCEEEEEECCGG-GCCEEEEEECTTSCEEEEEETT--SCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeC------CCeEEEEeCCCCeeeEEEccCCC-CCceEEEEECCCCCEEEEEcCC--CeEEEEEcCCccEEEE
Confidence 3566666654 3568899998765322 221101 111122223 56677777765 6789999988754332
Q ss_pred cCCCCcccceeEEE-----ECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CC----------CCCC------CC---
Q 045821 196 TEPNIFTEIEDSFV-----MDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DA----------NMAS------GW--- 250 (352)
Q Consensus 196 ~~~~~~~~~~~~~~-----~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~----------~~~~------~~--- 250 (352)
-.......-..++. -++++++.|+.+ ..+..||..+.+-... .. .+.. ..
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCC
T ss_pred EecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccc
Confidence 11111111111111 134566665443 2577788766542211 00 0000 00
Q ss_pred -C----CcEEEECCEEEEEecCCCCeEEEEeCCCCc
Q 045821 251 -R----GPAVVVDDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 251 -~----~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
+ ......++++++.|+.++ .|.+||..+.+
T Consensus 327 ~~~~~v~~l~~~~~~~l~s~~~d~-~i~~wd~~~~~ 361 (437)
T 3gre_A 327 RSLNALSTISVSNDKILLTDEATS-SIVMFSLNELS 361 (437)
T ss_dssp CSGGGGCCEEEETTEEEEEEGGGT-EEEEEETTCGG
T ss_pred ccCCceEEEEECCceEEEecCCCC-eEEEEECCCcc
Confidence 1 112333778888888776 99999998765
No 278
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=90.48 E-value=13 Score=35.78 Aligned_cols=148 Identities=13% Similarity=0.082 Sum_probs=80.4
Q ss_pred eeEEEecCCCCCC--CeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCC---eeEecCCCCCc
Q 045821 83 VCCYVLDPNSTRR--SWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMN---TWTDAAPMSTA 157 (352)
Q Consensus 83 ~~~~~~d~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~---~W~~~~~~~~~ 157 (352)
..++.+|. .+. .+..+.... ..........++.+|+....+. ....++.+|..+. .|+.+.+-...
T Consensus 259 ~~i~~~d~--~~~~~~~~~l~~~~----~~~~~~~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 259 NRLYVKDL--SQENAPLLTVQGDL----DADVSLVDNKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp CEEEEEET--TSTTCCCEEEECSS----SSCEEEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred cEEEEEEC--CCCCCceEEEeCCC----CceEEEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEecCCCC
Confidence 46777777 444 677765432 1112224455788988876432 3568899998764 37765432222
Q ss_pred ceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCccccee-EEEEC-CEEEEEccCCCCCCceEEEEEeCC
Q 045821 158 RCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIED-SFVMD-GKIYIRCSASAATSHVCALVYEPS 235 (352)
Q Consensus 158 r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~-~~~~~-g~iyv~GG~~~~~~~~~i~~yd~~ 235 (352)
.. .....++.|++....+....+.++|..+...+.+. .+....... ....+ +.+++... +......++.||..
T Consensus 330 -~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~s--s~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 330 -VL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA-LPGLGSVSGFNGKHDDPALYFGFE--NYAQPPTLYRFEPK 404 (693)
T ss_dssp -CE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC-CSSSSEEEECCCCTTCSCEEEEEE--CSSSCCEEEEECTT
T ss_pred -EE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee-cCCCceEEeeecCCCCCEEEEEec--CCCCCCEEEEEECC
Confidence 22 44445666665543322257889999877666664 222211111 11113 34444321 11223478999998
Q ss_pred CCceeecCC
Q 045821 236 TDSWLHADA 244 (352)
Q Consensus 236 ~~~W~~~~~ 244 (352)
+++.+.+..
T Consensus 405 ~g~~~~l~~ 413 (693)
T 3iuj_A 405 SGAISLYRA 413 (693)
T ss_dssp TCCEEEEEC
T ss_pred CCeEEEEEe
Confidence 888776643
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.13 E-value=8.4 Score=33.08 Aligned_cols=184 Identities=9% Similarity=-0.023 Sum_probs=100.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCe---eEecCCCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEE
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNT---WTDAAPMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWK 193 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~---W~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~ 193 (352)
++.||...- ....++++++.... +.....+..| .+.++ .++.||+.-... ..++++++....-+
T Consensus 46 ~~~lyw~D~------~~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~~~--~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 46 HGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDSET--NRIEVSNLDGSLRK 114 (318)
T ss_dssp GTEEEEEET------TTTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEETTT--TEEEEEETTSCSCE
T ss_pred CCEEEEEEC------CCCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEECCC--CEEEEEECCCCcEE
Confidence 578998853 24678888887652 1111122221 22333 378999986433 67889998765433
Q ss_pred EecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEE-ECCEEEEEecCCC
Q 045821 194 LHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVV-VDDALYVLDQSSG 269 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~-~~~~l~~~gg~~~ 269 (352)
.+.. .....-...++ .+|.||+.--. ....|+++++....=+.+ ......+ .+.++. .++.||+.....+
T Consensus 115 ~l~~-~~~~~P~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~~~l~~P-nglavd~~~~~lY~aD~~~~ 188 (318)
T 3sov_A 115 VLFW-QELDQPRAIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFIIINSEIYWP-NGLTLDYEEQKLYWADAKLN 188 (318)
T ss_dssp EEEC-SSCSSEEEEEEEGGGTEEEEEECS----SSCEEEEEETTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTT
T ss_pred EEEe-CCCCCccEEEEeCCCCEEEEEecC----CCCEEEEEEcCCCCeEEEEECCCCCc-cEEEEeccCCEEEEEECCCC
Confidence 3321 11111123333 26899997411 123688998864332222 2111000 111222 2788999876544
Q ss_pred CeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-CCceEEEEEcCCc
Q 045821 270 TKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG-KGCSAVVIDVGNI 323 (352)
Q Consensus 270 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g-G~~~~~~~d~~~~ 323 (352)
.|+++|++...-+.+... ....-.++++.++.+|+.- +...+..+|+.+.
T Consensus 189 -~I~~~d~dG~~~~~~~~~---~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 189 -FIHKSNLDGTNRQAVVKG---SLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp -EEEEEETTSCSCEEEECS---CCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred -EEEEEcCCCCceEEEecC---CCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 899999986544444321 1233457777888998874 4445667887443
No 280
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=89.70 E-value=14 Score=35.13 Aligned_cols=183 Identities=13% Similarity=-0.013 Sum_probs=99.6
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEE--ECCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEV--LGKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.||..-. ....++.+++ .......+.... . ..-..+++ .++.||+... ....++++++..
T Consensus 48 ~~~lywtD~----~~~~I~r~~~--~g~~~~~v~~~g---~-~~P~GlAvD~~~~~LY~tD~------~~~~I~v~~~dG 111 (628)
T 4a0p_A 48 DNRIYWTDI----SLKTISRAFM--NGSALEHVVEFG---L-DYPEGMAVDWLGKNLYWADT------GTNRIEVSKLDG 111 (628)
T ss_dssp TTEEEEEET----TTTEEEEEET--TSCSCEEEECSS---C-SCCCEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred CCEEEEEEC----CCCeEEEEEC--CCCCcEEEEeCC---C-CCcceEEEEeCCCEEEEEEC------CCCEEEEEecCC
Confidence 678887732 2235566677 555555444322 1 11123343 5789999853 246788998875
Q ss_pred CeeEec--CCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEcc
Q 045821 146 NTWTDA--APMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCS 219 (352)
Q Consensus 146 ~~W~~~--~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG 219 (352)
..-+.+ ..+..|+ ++++- ++.||+.--.. ...+++.++....-+.+.. ....-.+.+.- +++||+.-.
T Consensus 112 ~~~~~l~~~~l~~P~---~iavdp~~G~lY~tD~g~-~~~I~r~~~dG~~~~~l~~--~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 112 QHRQVLVWKDLDSPR---ALALDPAEGFMYWTEWGG-KPKIDRAAMDGSERTTLVP--NVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp TTCEEEECSSCCCEE---EEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEEC--SCSSEEEEEEETTTTEEEEEET
T ss_pred CcEEEEEeCCCCCcc---cEEEccCCCeEEEeCCCC-CCEEEEEeCCCCceEEEEC--CCCCcceEEEccccCEEEEEEC
Confidence 432222 2333332 33443 68999986211 2688889887665444432 11111122222 589999842
Q ss_pred CCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCC
Q 045821 220 ASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 220 ~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
. ...|+++|+....=+.+......+ ...++.++.||+..-..+ .|.+.|..++
T Consensus 186 ~-----~~~I~~~d~dG~~~~v~~~~l~~P--~glav~~~~ly~tD~~~~-~I~~~dk~tg 238 (628)
T 4a0p_A 186 D-----TNLIESSNMLGLNREVIADDLPHP--FGLTQYQDYIYWTDWSRR-SIERANKTSG 238 (628)
T ss_dssp T-----TTEEEEEETTSCSCEEEEECCSCE--EEEEEETTEEEEEETTTT-EEEEEETTTC
T ss_pred C-----CCEEEEEcCCCCceEEeeccCCCc--eEEEEECCEEEEecCCCC-EEEEEECCCC
Confidence 2 237888988643223332211111 123456889998875444 7888886544
No 281
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=89.55 E-value=7.3 Score=31.54 Aligned_cols=136 Identities=15% Similarity=0.218 Sum_probs=72.5
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCee--EecC----CCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCc
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNTW--TDAA----PMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W--~~~~----~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
.++++|+|-| ..+|+++...... ..+. .+|. .--++...++++|++-| +.+++|+..++.
T Consensus 27 ~~g~~yfFkg--------~~~Wr~~~~~~~~~p~~Is~~wpgLP~--~IDAA~~~~~~~yfFkG----~~yw~~~~~~~~ 92 (219)
T 1hxn_A 27 NHGATYVFSG--------SHYWRLDTNRDGWHSWPIAHQWPQGPS--TVDAAFSWEDKLYLIQD----TKVYVFLTKGGY 92 (219)
T ss_dssp TTSCEEEEET--------TEEEESSSSSCTTCCEEGGGTCTTSCS--SCSEEEEETTEEEEEET----TEEEEEECSSSC
T ss_pred CCCcEEEEeC--------CEEEEEcCCCCCCCceEhhhhccCCCC--CccEEEEECCcEEEecC----CEEEEEeCCCCc
Confidence 5788999977 3456655432211 1111 1221 11233334899999998 789999875421
Q ss_pred -----E-EEecC---CCCc--cc-ceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCC---ceeecCCCCCCCCCCcE
Q 045821 192 -----W-KLHTE---PNIF--TE-IEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTD---SWLHADANMASGWRGPA 254 (352)
Q Consensus 192 -----W-~~~~~---~~~~--~~-~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~ 254 (352)
+ +.|.. +|.. .. ..+++.. ++++|.+-|.. .|+||..+. .|...+.. ....-++
T Consensus 93 ~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~~-------ywr~d~~~~P~~i~~~~~g~--p~~vdAa 163 (219)
T 1hxn_A 93 TLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGRR-------LWWLDLKSGAQATWTELPWP--HEKVDGA 163 (219)
T ss_dssp EECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETTE-------EEEEEGGGGGGCCCEEECCS--CSCCSEE
T ss_pred eecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCCE-------EEEEeCCCCceEhhhcCCCC--CCCcCEE
Confidence 0 11211 2221 11 2233332 58999996544 799996542 23322211 1111223
Q ss_pred EE------------ECCEEEEEecCCCCeEEEEeCCC
Q 045821 255 VV------------VDDALYVLDQSSGTKLMMWQKES 279 (352)
Q Consensus 255 ~~------------~~~~l~~~gg~~~~~v~~yd~~~ 279 (352)
+. .++.+|++-|. ..++||..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~YFFkg~---~y~r~~~~~ 197 (219)
T 1hxn_A 164 LCMEKPLGPNSCSTSGPNLYLIHGP---NLYCYRHVD 197 (219)
T ss_dssp EEESSCSSSCCSCSSSCEEEEEETT---EEEEESSHH
T ss_pred EEccccccccceeccCCeEEEEECC---EEEEEeCCc
Confidence 33 34689999886 788988754
No 282
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=89.18 E-value=9.6 Score=32.45 Aligned_cols=134 Identities=11% Similarity=0.093 Sum_probs=66.7
Q ss_pred CCeEEEEECCCCee-EecCCCCCcceeeeeEEE-CCEEEEEeCCCC-------CCceEEEeCCCCcEEEecCCCCcccce
Q 045821 135 TSEVYCYDASMNTW-TDAAPMSTARCYFPCGVL-NQKIYCIGGLGD-------THSWDVYDPRTNNWKLHTEPNIFTEIE 205 (352)
Q Consensus 135 ~~~~~~~d~~t~~W-~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~-------~~~v~~yd~~t~~W~~~~~~~~~~~~~ 205 (352)
...++++|..+++. ..+.. + .....+.. ++ +++.+.... ...++.+| +++++.+... . ..
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~-~~ 219 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---V-SF 219 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---E-SE
T ss_pred cceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC---c-ce
Confidence 36789999998877 55544 2 11222222 45 555443321 14677778 6777766532 1 11
Q ss_pred eEEEECCEEEEEccCCCC---CCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCC-CeEEEEeCCCCc
Q 045821 206 DSFVMDGKIYIRCSASAA---TSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSG-TKLMMWQKESRE 281 (352)
Q Consensus 206 ~~~~~~g~iyv~GG~~~~---~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~-~~v~~yd~~~~~ 281 (352)
....-+|+.+++.+.... .....++.+| ++++..+.......... .+...+.+|+.+...+ ..++ ++ +++
T Consensus 220 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~-~~~~sdg~~~~~~~~~~~~l~-~~--~g~ 293 (347)
T 2gop_A 220 YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQ-AKIKDGKVYFTLFEEGSVNLY-IW--DGE 293 (347)
T ss_dssp EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEE-EEEETTEEEEEEEETTEEEEE-EE--SSS
T ss_pred eeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCC-ccEEcCcEEEEEecCCcEEEE-Ec--CCc
Confidence 222446654333333221 1234788998 66676664322111111 1222234777766554 3566 66 344
Q ss_pred eEEc
Q 045821 282 WSPV 285 (352)
Q Consensus 282 W~~~ 285 (352)
...+
T Consensus 294 ~~~~ 297 (347)
T 2gop_A 294 IKPI 297 (347)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4444
No 283
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=89.02 E-value=11 Score=32.86 Aligned_cols=62 Identities=10% Similarity=0.199 Sum_probs=38.0
Q ss_pred CCEEEEEecCC---------CCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCceEEEEEcCCc
Q 045821 258 DDALYVLDQSS---------GTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCSAVVIDVGNI 323 (352)
Q Consensus 258 ~~~l~~~gg~~---------~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~d~~~~ 323 (352)
++.+|+....+ ...+++||..+.+ .+..++... -...++..-+..+|+.++ ..+.+||.++.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 47888875411 2489999998865 344343321 111222223567888876 77889998875
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=88.80 E-value=3.5 Score=37.26 Aligned_cols=143 Identities=9% Similarity=0.137 Sum_probs=75.4
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-ECCE-EEEEccCCCCCCceEEEEEeCCCCcee---e
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDGK-IYIRCSASAATSHVCALVYEPSTDSWL---H 241 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g~-iyv~GG~~~~~~~~~i~~yd~~~~~W~---~ 241 (352)
++.||+.-.. ..+.++|+.++..+.+... ...-.+.++ -+|+ ||+..... ......+..++.. ..|. .
T Consensus 149 ~g~Lyv~d~~---~~I~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~-~~~~~~v~~~~~~-g~~~~~~~ 221 (430)
T 3tc9_A 149 HNHLYLVGEQ---HPTRLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQN-NNDRPNNYILTRE-SGFKVITE 221 (430)
T ss_dssp EEEEEEEEBT---EEEEEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCS-CTTSEEEEEEEGG-GTSCSEEE
T ss_pred CCeEEEEeCC---CcEEEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCC-CcccceEEEEeCC-Cceeeeee
Confidence 3689988643 5788999999888776531 111122222 2454 99984322 1222245556653 3333 2
Q ss_pred cCCCCCCCCCCcEEEE-CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEE--eCCEEEEEc-CCceEEE
Q 045821 242 ADANMASGWRGPAVVV-DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVA--IGKTIFVIG-KGCSAVV 317 (352)
Q Consensus 242 ~~~~~~~~~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~g-G~~~~~~ 317 (352)
+.. ... -++.++.- ++.||+..-..+ .|++||+++..-..+...+.. .....++. .++.||+.- +...++.
T Consensus 222 l~~-~~~-p~giavdp~~g~lyv~d~~~~-~V~~~~~~~~~~~~~~~~~~~--~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 222 LTK-GQN-CNGAETHPINGELYFNSWNAG-QVFRYDFTTQETTPLFTIQDS--GWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp EEE-CSS-CCCEEECTTTCCEEEEETTTT-EEEEEETTTTEEEEEEECSSS--SCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ecc-CCC-ceEEEEeCCCCEEEEEECCCC-EEEEEECCCCcEEEEEEcCCC--CcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 221 111 11222322 678888765443 899999998766444433321 11123333 244588875 3445666
Q ss_pred EEcC
Q 045821 318 IDVG 321 (352)
Q Consensus 318 ~d~~ 321 (352)
+|..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 6654
No 285
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.77 E-value=0.25 Score=43.85 Aligned_cols=145 Identities=8% Similarity=0.018 Sum_probs=57.5
Q ss_pred eEEECCEEEEEeCCCCCCceEEEeCCCCc--EEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCC--c
Q 045821 163 CGVLNQKIYCIGGLGDTHSWDVYDPRTNN--WKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTD--S 238 (352)
Q Consensus 163 ~~~~~~~iyv~gG~~~~~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~--~ 238 (352)
.++.++.+|+.+.. ..+.++|..+++ |+.-. .......++.++++|+.++.++ .++++|..++ .
T Consensus 5 P~v~~~~v~~gs~d---g~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~~s~dg-----~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 5 VTLPETLLFVSTLD---GSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLPDPNDG-----SLYTLGSKNNEGL 72 (369)
T ss_dssp ---CTTEEEEEETT---SEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEECTTTC-----CEEEC-----CCS
T ss_pred CeeeCCEEEEEcCC---CEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEEeCCCC-----EEEEEECCCCcee
Confidence 34456778776532 568999988774 87543 1112233455777888754332 4888888544 4
Q ss_pred eeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCc--eEEccCCCCCcCCCCceEEEeCCEEEEEcCCceEE
Q 045821 239 WLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESRE--WSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCSAV 316 (352)
Q Consensus 239 W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~ 316 (352)
|+.-............+..++.+|+ |+..+ .++.+|+++++ |+.-.... ...+..++.||+-+....+.
T Consensus 73 w~~~~~~~~~~~~sp~~~~~~~v~~-g~~dg-~v~a~D~~tG~~~w~~~~~~~-------~~~~p~~~~v~~~~~dg~v~ 143 (369)
T 2hz6_A 73 TKLPFTIPELVQASPCRSSDGILYM-GKKQD-IWYVIDLLTGEKQQTLSSAFA-------DSLSPSTSLLYLGRTEYTIT 143 (369)
T ss_dssp EECSCCHHHHHTTCSCC-----CCC-CEEEE-EEEEECCC-----------------------------EEEEEEEEEEE
T ss_pred eeeeccCccccccCceEecCCEEEE-EeCCC-EEEEEECCCCcEEEEecCCCc-------ccccccCCEEEEEecCCEEE
Confidence 6532110000011112223555543 33332 78899988654 64322111 01122455555544333455
Q ss_pred EEEcCCc--ccccc
Q 045821 317 VIDVGNI--GNIGG 328 (352)
Q Consensus 317 ~~d~~~~--~w~~~ 328 (352)
.+|+++. .|...
T Consensus 144 a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 144 MYDTKTRELRWNAT 157 (369)
T ss_dssp CCCSSSSSCCCEEE
T ss_pred EEECCCCCEEEeEe
Confidence 6887644 47653
No 286
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=88.58 E-value=0.084 Score=50.02 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=30.6
Q ss_pred CCCcHHHHHHhhccC-ccccchhhhhhhhhhccc
Q 045821 19 SGLPDDIALFCLARV-PRRYHAVLKCVSSRWRGL 51 (352)
Q Consensus 19 ~~lp~dl~~~il~r~-p~~~~~~l~~v~k~W~~l 51 (352)
+.||+|++.+|++++ |.++..+.+.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999865
No 287
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=88.51 E-value=11 Score=36.02 Aligned_cols=100 Identities=10% Similarity=0.122 Sum_probs=49.3
Q ss_pred ceEEEeCCCCcE-EEecCCCCc---ccce--eEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCC----
Q 045821 181 SWDVYDPRTNNW-KLHTEPNIF---TEIE--DSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGW---- 250 (352)
Q Consensus 181 ~v~~yd~~t~~W-~~~~~~~~~---~~~~--~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~---- 250 (352)
.+.++|..+.+- ..+...... .... .+..-+|++++..... ......++.+|..+.+...+-......+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 307 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR-AQNVSILTLCDATTGVCTKKHEDESEAWLHRQ 307 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET-TSCEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcC-CCCeEEEEEEeCCCCcceEEEEeccCCEEecc
Confidence 788899888763 444422111 1111 1222378766553322 2233478899998887655421111111
Q ss_pred -CCcEEEECCE-EEEE-ecCCC-----CeEEEEe-CCCCc
Q 045821 251 -RGPAVVVDDA-LYVL-DQSSG-----TKLMMWQ-KESRE 281 (352)
Q Consensus 251 -~~~~~~~~~~-l~~~-gg~~~-----~~v~~yd-~~~~~ 281 (352)
......-+|+ |++. +...+ ..++.+| ..+..
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 1233334555 5554 32222 2688888 45544
No 288
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=88.44 E-value=4.7 Score=40.97 Aligned_cols=142 Identities=11% Similarity=0.039 Sum_probs=76.4
Q ss_pred CeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceE-EEeCCCCcEEEecCCCCcccceeEEEECCEE
Q 045821 136 SEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWD-VYDPRTNNWKLHTEPNIFTEIEDSFVMDGKI 214 (352)
Q Consensus 136 ~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~-~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~i 214 (352)
..++.++..+++...+...+..+....... +++.+++++. ...++ +||..+..-+.+. .........+..-+|+.
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~--~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~ 392 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR--EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKF 392 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET--TEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSE
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC--CCceEEEEECCCCCceEec-CCccceeeeEECCCCCE
Confidence 467888887776555543332122222222 5554444433 25778 8999888766654 11111111222236766
Q ss_pred EEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCC---------CCeEEEEeCCCCceEEc
Q 045821 215 YIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSS---------GTKLMMWQKESREWSPV 285 (352)
Q Consensus 215 yv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~---------~~~v~~yd~~~~~W~~~ 285 (352)
.++++.. ..++.+|..+++-..+...........+..-+++.+++++.. ...+++||..+++...+
T Consensus 393 la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 393 AVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp EEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred EEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 6664433 268899998887766532222222223334466655554331 14799999998875555
Q ss_pred c
Q 045821 286 G 286 (352)
Q Consensus 286 ~ 286 (352)
.
T Consensus 468 ~ 468 (1045)
T 1k32_A 468 T 468 (1045)
T ss_dssp S
T ss_pred e
Confidence 4
No 289
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=88.37 E-value=15 Score=33.78 Aligned_cols=181 Identities=8% Similarity=0.068 Sum_probs=84.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTE 197 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~ 197 (352)
++..++.++. ...+.++|........+.....+. .+++.. ++..++.++.+ ..+.++|..+..-..+..
T Consensus 273 d~~~l~~~~~------d~~i~~w~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~t~~~d--~~i~~w~~~~~~~~~~~~ 342 (577)
T 2ymu_A 273 DGQTIASASD------DKTVKLWNRNGQLLQTLTGHSSSV--WGVAFSPDGQTIASASDD--KTVKLWNRNGQHLQTLTG 342 (577)
T ss_dssp TSSEEEEEET------TSCEEEEETTSCEEEEECCCSSCE--EEEEECTTSSEEEEEETT--SCEEEEETTSCEEEEECC
T ss_pred CCCEEEEEeC------CCEEEEEeCCCcEEEEEecCCCCe--EEEEECCCCCEEEEEeCC--CeEEEEeCCCCeeEEEeC
Confidence 4445555543 234677776655444443221111 122222 45555666544 567888887665444432
Q ss_pred CCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeC
Q 045821 198 PNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQK 277 (352)
Q Consensus 198 ~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~ 277 (352)
.. ......+..-+++..+.|+.++ .+..||.....-..+... .......++..+++.++.++.++ .+.+||.
T Consensus 343 ~~-~~v~~~~~s~~g~~l~~~~~dg-----~v~~~~~~~~~~~~~~~~-~~~v~~~~~s~dg~~l~~~~~d~-~v~~~~~ 414 (577)
T 2ymu_A 343 HS-SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQTLTGH-SSSVRGVAFSPDGQTIASASDDK-TVKLWNR 414 (577)
T ss_dssp CS-SCEEEEEECTTSSEEEEEETTS-----EEEEEETTCCEEEEEECC-SSCEEEEEECTTSSCEEEEETTS-EEEEECT
T ss_pred CC-CCEEEEEECCCCCEEEEEeCCC-----EEEEEcCCCCEEEEecCC-CCCeEEEEECCCCCEEEEEeCCC-EEEEEeC
Confidence 11 1111112223677777765442 466777654433333221 11101111223667777777665 8899997
Q ss_pred CCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcCCc-eEEEEEcC
Q 045821 278 ESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGKGC-SAVVIDVG 321 (352)
Q Consensus 278 ~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~d~~ 321 (352)
....-..+..... ...++. ..+++.++.++.+ .+.+||..
T Consensus 415 ~~~~~~~~~~~~~----~v~~~~~s~d~~~l~~~~~d~~v~~w~~~ 456 (577)
T 2ymu_A 415 NGQLLQTLTGHSS----SVWGVAFSPDDQTIASASDDKTVKLWNRN 456 (577)
T ss_dssp TCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCEEEEecCCCC----CeEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 6544444332211 111222 2245555555444 34467654
No 290
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=88.23 E-value=9 Score=30.94 Aligned_cols=148 Identities=9% Similarity=0.101 Sum_probs=78.4
Q ss_pred eeeEEECCEEEEEeCCCCCCceEEEeCCCCc-E--EEecCC-CC-cccceeEEEE--CCEEEEEccCCCCCCceEEEEEe
Q 045821 161 FPCGVLNQKIYCIGGLGDTHSWDVYDPRTNN-W--KLHTEP-NI-FTEIEDSFVM--DGKIYIRCSASAATSHVCALVYE 233 (352)
Q Consensus 161 ~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~-W--~~~~~~-~~-~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd 233 (352)
-+++..++++|++-| ..+++++..... . ..|... +. +...-++... ++++|++-|.. .|+||
T Consensus 34 DAi~~~~g~~~fFkg----~~~Wr~~~~~~~~~~P~~I~~~wp~lp~~IDAA~~~~~~~k~yfFkG~~-------yW~y~ 102 (218)
T 1gen_A 34 DGIAQIRGEIFFFKD----RFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNE-------YWIYS 102 (218)
T ss_dssp SEEEEETTEEEEEET----TEEEEESSTTSCCEEEEEGGGTCTTSCSCCSEEEEETTTTEEEEEETTE-------EEEEE
T ss_pred eEEEeCCCcEEEEEC----CEEEEEeCCCCccCCCEEHHHhcCCCCCCccEEEEECCCCEEEEEeCCE-------EEEEc
Confidence 345556899999999 678888765422 1 122211 11 1122233333 68999996543 88998
Q ss_pred CCCCc--e-eecCC-CCCC--CCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEE-----cc-CCCCCcCCCCceE
Q 045821 234 PSTDS--W-LHADA-NMAS--GWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSP-----VG-RLSTLLTRPPCKL 299 (352)
Q Consensus 234 ~~~~~--W-~~~~~-~~~~--~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~-----~~-~~~~~~~~~~~~~ 299 (352)
..+.. . +.+.. ..+. ...-+++. .++++|++-|. ..|+||..+++-.. +. ..+. .+...-++
T Consensus 103 ~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~---~ywr~d~~~~~v~~gyPr~i~~~w~g-~p~~idaA 178 (218)
T 1gen_A 103 ASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---KFWRYNEVKKKMDPGFPKLIADAWNA-IPDNLDAV 178 (218)
T ss_dssp TTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT---EEEEEETTTTEECSSCCEEHHHHSSS-CCSSCSEE
T ss_pred CccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC---EEEEEECccccccCCCCcchhhccCC-CCCCCCEE
Confidence 52110 0 01111 0111 11122333 36899999886 89999988764321 11 0111 01122233
Q ss_pred EEe--CCEEEEEcCCceEEEEEcCCcc
Q 045821 300 VAI--GKTIFVIGKGCSAVVIDVGNIG 324 (352)
Q Consensus 300 ~~~--~~~i~v~gG~~~~~~~d~~~~~ 324 (352)
... ++++|.|-|. ..+-||..+..
T Consensus 179 f~~~~~g~~YfFkg~-~y~~~~~~~~~ 204 (218)
T 1gen_A 179 VDLQGGGHSYFFKGA-YYLKLENQSLK 204 (218)
T ss_dssp EECTTTCEEEEEETT-EEEEEETTEEE
T ss_pred EEEcCCCcEEEEECC-EEEEEECCcee
Confidence 444 3899999876 45667776543
No 291
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=87.81 E-value=11 Score=31.39 Aligned_cols=136 Identities=10% Similarity=-0.029 Sum_probs=67.6
Q ss_pred CceEEEeCCCCcEEEecCCCCcccceeEE--EECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE
Q 045821 180 HSWDVYDPRTNNWKLHTEPNIFTEIEDSF--VMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV 257 (352)
Q Consensus 180 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~--~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 257 (352)
..|.++|..+++...+-..........++ .-+++..+.|+.++ .+..+|..+++-...-. .+.........
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~~--~h~~~~~~~~~ 117 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMT--SHSARVGSLSW 117 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE--CCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEEec--CccceEEEeec
Confidence 67889999998765543222222211222 23677778876553 57788887775433211 11111122344
Q ss_pred CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcCCc-eEEEEEcCCcc
Q 045821 258 DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGKGC-SAVVIDVGNIG 324 (352)
Q Consensus 258 ~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~-~~~~~d~~~~~ 324 (352)
++.+++.|+..+ .+..++..+........... ...........+++.++.|+.+ .+.++|+.+..
T Consensus 118 ~~~~l~s~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 118 NSYILSSGSRSG-HIHHHDVRVAEHHVATLSGH-SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp ETTEEEEEETTS-EEEEEETTSSSCEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred CCCEEEEEecCC-ceEeeecCCCceeEEEEcCc-cCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 566666666655 66666666544322211110 0011111122344455555444 45678877543
No 292
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=87.70 E-value=18 Score=34.65 Aligned_cols=108 Identities=5% Similarity=-0.231 Sum_probs=51.2
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCC---CCCCCeEEEEECCCCeeEecCCCCCc--c
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWS---EDATSEVYCYDASMNTWTDAAPMSTA--R 158 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~~~d~~t~~W~~~~~~~~~--r 158 (352)
.++.+|. .++.-..+.................-+++..+++..+.. ......++++|..+++-+.+...... .
T Consensus 38 ~i~~~d~--~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~ 115 (723)
T 1xfd_A 38 TVRLWNV--ETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAK 115 (723)
T ss_dssp CEEEBCG--GGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCC
T ss_pred CEEEEEC--CCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccc
Confidence 4566687 666554444322100001112222235554455432221 12347899999998876555543221 1
Q ss_pred eeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 159 CYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 159 ~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
.......-+|+..+++.. ..++++|..++.-.++.
T Consensus 116 ~~~~~~SPdG~~la~~~~---~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE---NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp CSBCCBCSSTTCEEEEET---TEEEEESSSSSCCEEEE
T ss_pred ccccEECCCCCEEEEEEC---CeEEEEECCCCceEEEe
Confidence 111111114433333322 46788888877666554
No 293
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=87.43 E-value=14 Score=32.15 Aligned_cols=196 Identities=11% Similarity=0.008 Sum_probs=93.4
Q ss_pred CCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcc--cceeEEEEC
Q 045821 135 TSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFT--EIEDSFVMD 211 (352)
Q Consensus 135 ~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~--~~~~~~~~~ 211 (352)
...+.++|+.+.+-........+ . .+++.- ++++.+.++. ..+.+++..++............ ....+..-+
T Consensus 156 d~~i~iwd~~~~~~~~~~~~~~~-V-~~v~fspdg~~l~s~s~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd 230 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIETRGE-V-KDLHFSTDGKVVAYITG---SSLEVISTVTGSCIARKTDFDKNWSLSKINFIAD 230 (365)
T ss_dssp SCEEEEEETTTTEEEEEEECSSC-C-CEEEECTTSSEEEEECS---SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEET
T ss_pred CCEEEEeECCCCcEEEEeCCCCc-e-EEEEEccCCceEEeccc---eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCC
Confidence 35788899998775432211111 1 122222 5666665553 55778888777654332221111 112233458
Q ss_pred CEEEEEccCCCCCCceEEEEEeCCCCceeecCCC-CCCCCCCc-E--EEECCEEEEEecCCCCeEEEEeCCCCceEEccC
Q 045821 212 GKIYIRCSASAATSHVCALVYEPSTDSWLHADAN-MASGWRGP-A--VVVDDALYVLDQSSGTKLMMWQKESREWSPVGR 287 (352)
Q Consensus 212 g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~-~~~~~~~~-~--~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~ 287 (352)
++.++.++... .....+..+|............ ........ + +.-++++++.|+.++ .|.+||..+.+-. ..
T Consensus 231 g~~l~~~s~d~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-~V~iwd~~~~~~~--~~ 306 (365)
T 4h5i_A 231 DTVLIAASLKK-GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-SIALVKLKDLSMS--KI 306 (365)
T ss_dssp TEEEEEEEESS-SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-CEEEEETTTTEEE--EE
T ss_pred CCEEEEEecCC-cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-EEEEEECCCCcEE--EE
Confidence 88888765443 2223566677665554332110 01111111 1 234788888888776 8999999876532 21
Q ss_pred CCCCcCCCCceE-EEeCCEEEEEcCCce-EEEEEcCCcccccceEEeccCCCCCC
Q 045821 288 LSTLLTRPPCKL-VAIGKTIFVIGKGCS-AVVIDVGNIGNIGGIMVSSSIPKLND 340 (352)
Q Consensus 288 ~~~~~~~~~~~~-~~~~~~i~v~gG~~~-~~~~d~~~~~w~~~~~~~~~~~~~~~ 340 (352)
........-.++ ...++++++-|+.++ +-++|+..+- ....+++..+.++.-
T Consensus 307 ~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~-~~~~s~~~~l~kl~~ 360 (365)
T 4h5i_A 307 FKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY-ANYTSMKQKISKLEH 360 (365)
T ss_dssp ETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT-TC-------------
T ss_pred ecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC-cCccCccccceeeec
Confidence 111001111122 234777777776665 4489986543 344566666655543
No 294
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.06 E-value=16 Score=32.50 Aligned_cols=116 Identities=9% Similarity=0.027 Sum_probs=66.3
Q ss_pred CCCCCcceeeeeEEECCEEEEEeCCCCC---Cce--EEEeCC----CCcE-EEecC-CCCcccceeEEEECCEEEEEccC
Q 045821 152 APMSTARCYFPCGVLNQKIYCIGGLGDT---HSW--DVYDPR----TNNW-KLHTE-PNIFTEIEDSFVMDGKIYIRCSA 220 (352)
Q Consensus 152 ~~~~~~r~~~~~~~~~~~iyv~gG~~~~---~~v--~~yd~~----t~~W-~~~~~-~~~~~~~~~~~~~~g~iyv~GG~ 220 (352)
+..+..-.-|+.+.+++.-|++|=...+ ..+ ..|... ...- +.++. ........+.-.++|.||+..-.
T Consensus 278 ~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRg 357 (670)
T 3ju4_A 278 GLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRG 357 (670)
T ss_dssp CSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEEE
T ss_pred ccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEecC
Confidence 3344445568888898877787754333 332 222111 1112 23321 11223334556789999998533
Q ss_pred CCC-CCceEEEEEeCCCCceeecCCCCCCCCC-CcEEEECCEEEEEecC
Q 045821 221 SAA-TSHVCALVYEPSTDSWLHADANMASGWR-GPAVVVDDALYVLDQS 267 (352)
Q Consensus 221 ~~~-~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~l~~~gg~ 267 (352)
... .....+.+-+.....|..+.-+...... .+.+..++.|||+|..
T Consensus 358 t~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 358 TRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp SCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred cCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 322 3334778888888999988654222222 2246789999999863
No 295
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.96 E-value=16 Score=32.33 Aligned_cols=147 Identities=10% Similarity=0.070 Sum_probs=78.0
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeec-C
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHA-D 243 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~ 243 (352)
++.+++.|+.+ ..+.+||..+.+-...-..+.......++.+ ++++++.|+.++ .+..||..+.+.... .
T Consensus 181 ~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~ 253 (437)
T 3gre_A 181 EKSLLVALTNL--SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVLIRSWS 253 (437)
T ss_dssp SCEEEEEEETT--SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEEEEEB
T ss_pred CCCEEEEEeCC--CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccEEEEEe
Confidence 46777777765 6889999988764322111111111122223 677777766553 488888877654321 1
Q ss_pred CCCCCCCCCcE--EE------ECCEEEEEecCCCCeEEEEeCCCCceEEc-cCC----------CCC------------c
Q 045821 244 ANMASGWRGPA--VV------VDDALYVLDQSSGTKLMMWQKESREWSPV-GRL----------STL------------L 292 (352)
Q Consensus 244 ~~~~~~~~~~~--~~------~~~~l~~~gg~~~~~v~~yd~~~~~W~~~-~~~----------~~~------------~ 292 (352)
. .. .... +. .++.+++.|+.++ .+.+||..+++-... ... |.. .
T Consensus 254 ~--~~--~~~v~~~~~~~~~s~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (437)
T 3gre_A 254 F--GD--HAPITHVEVCQFYGKNSVIVVGGSSKT-FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRS 328 (437)
T ss_dssp C--TT--CEEEEEEEECTTTCTTEEEEEEESTTE-EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCS
T ss_pred c--CC--CCceEEEEeccccCCCccEEEEEcCCC-cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccccc
Confidence 1 00 1111 11 1345666666555 899999987663322 100 000 0
Q ss_pred CCCCceEEEeCCEEEEEcCCce-EEEEEcCCccc
Q 045821 293 TRPPCKLVAIGKTIFVIGKGCS-AVVIDVGNIGN 325 (352)
Q Consensus 293 ~~~~~~~~~~~~~i~v~gG~~~-~~~~d~~~~~w 325 (352)
.....++...++++++.|+.+. +.++|+.+..-
T Consensus 329 ~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 329 LNALSTISVSNDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp GGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGG
T ss_pred CCceEEEEECCceEEEecCCCCeEEEEECCCccc
Confidence 0111233444777777777654 55899887653
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=86.95 E-value=12 Score=33.68 Aligned_cols=143 Identities=12% Similarity=0.154 Sum_probs=74.8
Q ss_pred CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCcee---ecCC
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWL---HADA 244 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~---~~~~ 244 (352)
+.||+.-.. ..+.++|+.+++.+.+... ...-...++.-+|+||+..... ......+..++... .+. .++.
T Consensus 153 g~Lyv~D~~---~~I~~id~~~g~v~~~~~~-~~~P~giavd~dG~lyVad~~~-~~~~~gv~~~~~~~-~~~~~~~~~~ 226 (433)
T 4hw6_A 153 DDLYWVGQR---DAFRHVDFVNQYVDIKTTN-IGQCADVNFTLNGDMVVVDDQS-SDTNTGIYLFTRAS-GFTERLSLCN 226 (433)
T ss_dssp CEEEEECBT---SCEEEEETTTTEEEEECCC-CSCEEEEEECTTCCEEEEECCS-CTTSEEEEEECGGG-TTCCEEEEEE
T ss_pred CEEEEEeCC---CCEEEEECCCCEEEEeecC-CCCccEEEECCCCCEEEEcCCC-CcccceEEEEECCC-Ceeccccccc
Confidence 789998643 6789999998888776531 1111112233366799984221 11123455565432 222 1111
Q ss_pred CCCCCCCCcEEEE-CCEEEEEecCCCCeEEEEeCCCCce-EEccCCCCCcCCCCceEEE--eCCEEEEEc-CCceEEEEE
Q 045821 245 NMASGWRGPAVVV-DDALYVLDQSSGTKLMMWQKESREW-SPVGRLSTLLTRPPCKLVA--IGKTIFVIG-KGCSAVVID 319 (352)
Q Consensus 245 ~~~~~~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~--~~~~i~v~g-G~~~~~~~d 319 (352)
.. .-.+.++.- ++.||+.....+ .|++||+.+++. ..+...... ...+.++. .++.||+.- +...++.+|
T Consensus 227 -~~-~P~giavd~~~G~lyv~d~~~~-~V~~~d~~~g~~~~~~~~~~~~--~~~~~ia~dpdG~~LYvad~~~~~I~~~~ 301 (433)
T 4hw6_A 227 -AR-GAKTCAVHPQNGKIYYTRYHHA-MISSYDPATGTLTEEEVMMDTK--GSNFHIVWHPTGDWAYIIYNGKHCIYRVD 301 (433)
T ss_dssp -CS-SBCCCEECTTTCCEEECBTTCS-EEEEECTTTCCEEEEEEECSCC--SSCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred -cC-CCCEEEEeCCCCeEEEEECCCC-EEEEEECCCCeEEEEEeccCCC--CCcccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 11 111223333 678887765443 899999987665 333222211 11122333 345688875 445666766
Q ss_pred cC
Q 045821 320 VG 321 (352)
Q Consensus 320 ~~ 321 (352)
..
T Consensus 302 ~d 303 (433)
T 4hw6_A 302 YN 303 (433)
T ss_dssp BC
T ss_pred CC
Confidence 54
No 297
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.62 E-value=18 Score=32.55 Aligned_cols=227 Identities=9% Similarity=-0.006 Sum_probs=110.9
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASM 145 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t 145 (352)
++.||+.-. . ..+..+|+ .++....+.... .+. ..++.- ++.||+...... .....+..++...
T Consensus 149 ~g~Lyv~d~----~-~~I~~id~--~~~~v~~~~~~~----~~P-~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~~~g 214 (430)
T 3tc9_A 149 HNHLYLVGE----Q-HPTRLIDF--EKEYVSTVYSGL----SKV-RTICWTHEADSMIITNDQNN--NDRPNNYILTRES 214 (430)
T ss_dssp EEEEEEEEB----T-EEEEEEET--TTTEEEEEECCC----SCE-EEEEECTTSSEEEEEECCSC--TTSEEEEEEEGGG
T ss_pred CCeEEEEeC----C-CcEEEEEC--CCCEEEEEecCC----CCc-ceEEEeCCCCEEEEEeCCCC--cccceEEEEeCCC
Confidence 367777732 1 56778899 877777665421 122 222222 345998864322 1223456666543
Q ss_pred CeeE---ecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE-ECCE-EEEEc
Q 045821 146 NTWT---DAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV-MDGK-IYIRC 218 (352)
Q Consensus 146 ~~W~---~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~g~-iyv~G 218 (352)
. +. .++.+.. .+.+++. ++.||+.--.. ..+++||+.+..-..+...+....-.+.++ -+|+ ||+.-
T Consensus 215 ~-~~~~~~l~~~~~---p~giavdp~~g~lyv~d~~~--~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 G-FKVITELTKGQN---CNGAETHPINGELYFNSWNA--GQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp T-SCSEEEEEECSS---CCCEEECTTTCCEEEEETTT--TEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred c-eeeeeeeccCCC---ceEEEEeCCCCEEEEEECCC--CEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 2 22 2222222 2334443 57888875432 679999998775433322222111122333 2555 89984
Q ss_pred cCCCCCCceEEEEEeCC--CCceee---cCCCC-----------CCCCCCc--EEEE----------CCEEEEEecCCCC
Q 045821 219 SASAATSHVCALVYEPS--TDSWLH---ADANM-----------ASGWRGP--AVVV----------DDALYVLDQSSGT 270 (352)
Q Consensus 219 G~~~~~~~~~i~~yd~~--~~~W~~---~~~~~-----------~~~~~~~--~~~~----------~~~l~~~gg~~~~ 270 (352)
.. ...|++++.. +.+... +.... ......+ .+.+ ++.||+.....+
T Consensus 289 ~~-----~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~- 362 (430)
T 3tc9_A 289 VN-----QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH- 362 (430)
T ss_dssp TT-----TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT-
T ss_pred CC-----CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCc-
Confidence 22 1246665443 332211 11000 0011111 2333 367888865433
Q ss_pred eEEEEeCCCCceEEccCCC-----C---------CcCCCCceEEEe--CCEEEEEc-CCceEEEEEcC
Q 045821 271 KLMMWQKESREWSPVGRLS-----T---------LLTRPPCKLVAI--GKTIFVIG-KGCSAVVIDVG 321 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~~~-----~---------~~~~~~~~~~~~--~~~i~v~g-G~~~~~~~d~~ 321 (352)
.|.++|++ +....+.... . .....-.+++.- ++.|||.- +...+..++++
T Consensus 363 ~I~~i~~~-G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 363 CIRILTPQ-GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECTT-SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCC-CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 89999965 4665554221 0 001122345544 57888875 34455566665
No 298
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=85.81 E-value=17 Score=31.74 Aligned_cols=158 Identities=13% Similarity=0.091 Sum_probs=78.1
Q ss_pred CCEEEEEEecCC--------CCceeEEEecCCCCCCCeeEeccCCC--cccCCcceEEEEEC---C--EEEEEeCCCCCC
Q 045821 68 ETWIYAFCRDNK--------LERVCCYVLDPNSTRRSWKMIHELPA--RTLRRKGMGFEVLG---K--NAYLLGGCGWSE 132 (352)
Q Consensus 68 ~~~l~~~gg~~~--------~~~~~~~~~d~~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~---~--~iyv~GG~~~~~ 132 (352)
++.+|+..|.-. ...-.++.||+++.+.+-.++..... ......-|.+.... + .||++.-...
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~-- 137 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGS-- 137 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTT--
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCC--
Confidence 567777654211 12224778888322445555543211 00123345555432 3 5777754321
Q ss_pred CCCCeEEEEECCCCeeEecCCCC---CcceeeeeEEECCEEEEEeCC--CC------------C-CceEEEeCCCCcEEE
Q 045821 133 DATSEVYCYDASMNTWTDAAPMS---TARCYFPCGVLNQKIYCIGGL--GD------------T-HSWDVYDPRTNNWKL 194 (352)
Q Consensus 133 ~~~~~~~~~d~~t~~W~~~~~~~---~~r~~~~~~~~~~~iyv~gG~--~~------------~-~~v~~yd~~t~~W~~ 194 (352)
...-.++.+|+.++....+.... .-+..-..+.-+|.+|+-+.. .. . ..+++||+. +.+.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~ 215 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRV 215 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEE
Confidence 23445677788777665554332 223333444447888886531 11 1 568888884 3443
Q ss_pred ecCCCCcccceeEEEE-CC-EEEEEccCCCCCCceEEEEEeCCC
Q 045821 195 HTEPNIFTEIEDSFVM-DG-KIYIRCSASAATSHVCALVYEPST 236 (352)
Q Consensus 195 ~~~~~~~~~~~~~~~~-~g-~iyv~GG~~~~~~~~~i~~yd~~~ 236 (352)
+.+ ........+.. ++ .+|+.-.. ...+++|+...
T Consensus 216 ~~~--~l~~pNGia~spDg~~lYvadt~-----~~~I~~~~~~~ 252 (355)
T 3sre_A 216 VAE--GFDFANGINISPDGKYVYIAELL-----AHKIHVYEKHA 252 (355)
T ss_dssp EEE--EESSEEEEEECTTSSEEEEEEGG-----GTEEEEEEECT
T ss_pred eec--CCcccCcceECCCCCEEEEEeCC-----CCeEEEEEECC
Confidence 321 11111223332 44 78887321 23688888753
No 299
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=85.22 E-value=13 Score=31.62 Aligned_cols=137 Identities=11% Similarity=0.061 Sum_probs=71.5
Q ss_pred CCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CC-EEEEEeCC-----------------C------C-CCceEEEeCC
Q 045821 135 TSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQ-KIYCIGGL-----------------G------D-THSWDVYDPR 188 (352)
Q Consensus 135 ~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~gG~-----------------~------~-~~~v~~yd~~ 188 (352)
...++++|..+++...+...+. ....+.. ++ .|++.... + . ...++++|..
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred cceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 4568999998887666544332 1112221 44 44444311 0 0 1568889999
Q ss_pred CCcE-EEecCCCCcccceeEEEECCEEEEEccCCCCC---C-ceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCE-EE
Q 045821 189 TNNW-KLHTEPNIFTEIEDSFVMDGKIYIRCSASAAT---S-HVCALVYEPSTDSWLHADANMASGWRGPAVVVDDA-LY 262 (352)
Q Consensus 189 t~~W-~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~---~-~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-l~ 262 (352)
+++. +.+.. + ........-+| +++.+...... . ...++.+| ++++..+... . ......-+|+ |+
T Consensus 161 ~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~-~~~~~spdg~~l~ 230 (347)
T 2gop_A 161 SEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---V-SFYAVDSDGERIL 230 (347)
T ss_dssp TTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---E-SEEEEEECSSCEE
T ss_pred CCeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC---c-ceeeECCCCCEEE
Confidence 8887 66653 2 22222233355 55554332211 2 45788888 6667666432 1 1112244554 55
Q ss_pred EEecCC------CCeEEEEeCCCCceEEcc
Q 045821 263 VLDQSS------GTKLMMWQKESREWSPVG 286 (352)
Q Consensus 263 ~~gg~~------~~~v~~yd~~~~~W~~~~ 286 (352)
+.+... ...++.+| ++++..+.
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred EEEccccCCccccceEEEEC--CCceEecc
Confidence 444322 24799999 66666654
No 300
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=85.15 E-value=19 Score=31.69 Aligned_cols=103 Identities=4% Similarity=0.043 Sum_probs=52.2
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCC--cEEEecCCCCc---c-cceeEEEE--CC-EEEEEccCCCCCCceEEEEEeCCCC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTN--NWKLHTEPNIF---T-EIEDSFVM--DG-KIYIRCSASAATSHVCALVYEPSTD 237 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~--~W~~~~~~~~~---~-~~~~~~~~--~g-~iyv~GG~~~~~~~~~i~~yd~~~~ 237 (352)
++.+++.| .+ ..+.+||..+. .+..+...+.. + ....++.+ ++ ++++.|+.++ .+..||..+.
T Consensus 188 ~~~~l~s~-~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~~~~ 259 (447)
T 3dw8_B 188 DYETYLSA-DD--LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-----TIRLCDMRAS 259 (447)
T ss_dssp TSSEEEEE-CS--SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTC
T ss_pred CCCEEEEe-CC--CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-----eEEEEECcCC
Confidence 45666655 32 78899999842 23322111111 1 11112222 44 6777766553 5788888776
Q ss_pred ce-----eecCCCCCC-----------CCCCcEEEECCEEEEEecCCCCeEEEEeCCC
Q 045821 238 SW-----LHADANMAS-----------GWRGPAVVVDDALYVLDQSSGTKLMMWQKES 279 (352)
Q Consensus 238 ~W-----~~~~~~~~~-----------~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~ 279 (352)
+- ..+...... ........-++++++.++. + .+.+||..+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~-~v~iwd~~~ 315 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L-SVKVWDLNM 315 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S-EEEEEETTC
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C-eEEEEeCCC
Confidence 53 222221100 0001112236667777766 4 999999975
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=84.83 E-value=27 Score=33.16 Aligned_cols=211 Identities=8% Similarity=-0.048 Sum_probs=115.2
Q ss_pred eEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE--CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceee
Q 045821 84 CCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL--GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYF 161 (352)
Q Consensus 84 ~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~ 161 (352)
.+...|. .+..-..+.+.+ ....-.+++.. ++.||+..- ....++++++.......+..... ....
T Consensus 16 ~I~~i~l--~~~~~~~~~~~~---~~~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~-~~P~ 83 (628)
T 4a0p_A 16 DIRRISL--ETNNNNVAIPLT---GVKEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGL-DYPE 83 (628)
T ss_dssp EEEEEES--SCTTCEEECCCC---SCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSC-SCCC
T ss_pred cEEEEEC--CCCCcceEEEcC---CCCceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCC-CCcc
Confidence 4455566 544433333333 11222344443 688999853 24678888887655544432221 1122
Q ss_pred eeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCC
Q 045821 162 PCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTD 237 (352)
Q Consensus 162 ~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~ 237 (352)
.+++ .+++||+.-... ..++++++....=+.+.. .....-...++. +|.||+.-- +....|++.++...
T Consensus 84 GlAvD~~~~~LY~tD~~~--~~I~v~~~dG~~~~~l~~-~~l~~P~~iavdp~~G~lY~tD~----g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGT--NRIEVSKLDGQHRQVLVW-KDLDSPRALALDPAEGFMYWTEW----GGKPKIDRAAMDGS 156 (628)
T ss_dssp EEEEETTTTEEEEEETTT--TEEEEEETTSTTCEEEEC-SSCCCEEEEEEETTTTEEEEEEC----SSSCEEEEEETTSC
T ss_pred eEEEEeCCCEEEEEECCC--CEEEEEecCCCcEEEEEe-CCCCCcccEEEccCCCeEEEeCC----CCCCEEEEEeCCCC
Confidence 3344 368999986533 688999987654333321 111111233443 689999731 11237888888655
Q ss_pred ceeecCCCCCCCCCCcEEEE---CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcC-Cc
Q 045821 238 SWLHADANMASGWRGPAVVV---DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGK-GC 313 (352)
Q Consensus 238 ~W~~~~~~~~~~~~~~~~~~---~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG-~~ 313 (352)
.-+.+.... .....+.+ +++||+.....+ .|+++|++...=+.+... ....+++++.++.||+.-- ..
T Consensus 157 ~~~~l~~~~---~~P~GlalD~~~~~LY~aD~~~~-~I~~~d~dG~~~~v~~~~----l~~P~glav~~~~ly~tD~~~~ 228 (628)
T 4a0p_A 157 ERTTLVPNV---GRANGLTIDYAKRRLYWTDLDTN-LIESSNMLGLNREVIADD----LPHPFGLTQYQDYIYWTDWSRR 228 (628)
T ss_dssp SCEEEECSC---SSEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEEC----CSCEEEEEEETTEEEEEETTTT
T ss_pred ceEEEECCC---CCcceEEEccccCEEEEEECCCC-EEEEEcCCCCceEEeecc----CCCceEEEEECCEEEEecCCCC
Confidence 544432211 11122332 588999986554 899999876433333211 2334678888899998753 44
Q ss_pred eEEEEEcC
Q 045821 314 SAVVIDVG 321 (352)
Q Consensus 314 ~~~~~d~~ 321 (352)
.+..+|..
T Consensus 229 ~I~~~dk~ 236 (628)
T 4a0p_A 229 SIERANKT 236 (628)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 55567754
No 302
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=84.20 E-value=19 Score=30.80 Aligned_cols=145 Identities=10% Similarity=0.031 Sum_probs=80.0
Q ss_pred ECCEEEEEeCCCCCCCCCCeEEEEECCCCeeEec--CCCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEE
Q 045821 118 LGKNAYLLGGCGWSEDATSEVYCYDASMNTWTDA--APMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWK 193 (352)
Q Consensus 118 ~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~--~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~ 193 (352)
.++.||+.-. ....++++++....-+.+ ..+..|+ ..++ .++.||+..-.. ...++++++....=+
T Consensus 89 ~~g~ly~~d~------~~~~I~~~~~dG~~~~~l~~~~~~~P~---giavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 89 LGEKLYWTDS------ETNRIEVSNLDGSLRKVLFWQELDQPR---AIALDPSSGFMYWTDWGE-VPKIERAGMDGSSRF 158 (318)
T ss_dssp TTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCSSEE---EEEEEGGGTEEEEEECSS-SCEEEEEETTSCSCE
T ss_pred CCCeEEEEEC------CCCEEEEEECCCCcEEEEEeCCCCCcc---EEEEeCCCCEEEEEecCC-CCEEEEEEcCCCCeE
Confidence 4789998853 235788898875433333 2233332 2333 258999976211 167899988754323
Q ss_pred EecCCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeecCC-CCCCCCCCcEEEECCEEEEEecCCCC
Q 045821 194 LHTEPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHADA-NMASGWRGPAVVVDDALYVLDQSSGT 270 (352)
Q Consensus 194 ~~~~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~l~~~gg~~~~ 270 (352)
.+.... ...-...++- +++||+.-.. ...|+++|.....-+.+.. ....+ ...++.++.+|+..-.. .
T Consensus 159 ~~~~~~-l~~Pnglavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~P--~glav~~~~lywtd~~~-~ 229 (318)
T 3sov_A 159 IIINSE-IYWPNGLTLDYEEQKLYWADAK-----LNFIHKSNLDGTNRQAVVKGSLPHP--FALTLFEDILYWTDWST-H 229 (318)
T ss_dssp EEECSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSCCSCE--EEEEEETTEEEEEETTT-T
T ss_pred EEEECC-CCCccEEEEeccCCEEEEEECC-----CCEEEEEcCCCCceEEEecCCCCCc--eEEEEeCCEEEEEecCC-C
Confidence 332111 1111233333 6899998422 2378899886433333321 11111 12345688999885433 4
Q ss_pred eEEEEeCCCCc
Q 045821 271 KLMMWQKESRE 281 (352)
Q Consensus 271 ~v~~yd~~~~~ 281 (352)
.|.++|+.+++
T Consensus 230 ~V~~~~~~~G~ 240 (318)
T 3sov_A 230 SILACNKYTGE 240 (318)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCC
Confidence 99999996554
No 303
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=83.67 E-value=14 Score=35.84 Aligned_cols=145 Identities=13% Similarity=0.109 Sum_probs=71.3
Q ss_pred CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCC-CC
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADA-NM 246 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~-~~ 246 (352)
+.+|+.+. ..+++-.-.-.+|+.+...+..........-++.+|+.+ .. .+++-.-...+|+.+.. ..
T Consensus 538 ~~~~a~~~----~~v~~S~D~G~tW~~~~~~~~~~~i~~~~~~~~~~~a~~-~g------~v~~S~DgG~tW~~~~~~~~ 606 (737)
T 2cn3_A 538 SVIWTPEN----ASPAVTTDNGNSWKVCTNLGMGAVVASDRVNGKKFYAFY-NG------KFYISTDGGLTFTDTKAPQL 606 (737)
T ss_dssp CEEEECTT----SCCEEESSTTSSCEECBTCCTTCEEEECSSCTTCEEEEE-TT------EEEEESSTTSBCEECCCSSC
T ss_pred CEEEEeCC----CeEEEECCCCCCCccCCCCCCCceEEEEecCCCEEEEec-CC------EEEEECCCCcCcccccCCCC
Confidence 34666443 234432223458999874433211100011245777764 11 34444444678998642 22
Q ss_pred CCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEE--EeC---CEEEEEc--CC-ceEE
Q 045821 247 ASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLV--AIG---KTIFVIG--KG-CSAV 316 (352)
Q Consensus 247 ~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~---~~i~v~g--G~-~~~~ 316 (352)
+.......+. .++.||+.+... .|++-+-...+|+++..++.. ....+. ..+ +.||++| |. ..++
T Consensus 607 p~~~~~i~~~~~~~g~l~~~~~~g--~l~~S~D~G~tW~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~g~~~gl~ 681 (737)
T 2cn3_A 607 PKSVNKIKAVPGKEGHVWLAAREG--GLWRSTDGGYTFEKLSNVDTA---HVVGFGKAAPGQDYMAIYITGKIDNVLGFF 681 (737)
T ss_dssp CSCCSEEEEETTEEEEEEEECBTT--CEEEESSTTSSCEECTTCSEE---EEEEEECCCTTCSSCEEEEEEEETTEEEEE
T ss_pred CCccceEEEEeCCCCEEEEEeCCC--cEEEEeCCCcccEECcCCCcc---ceEEEeecCCCCCCcEEEEEEecCCcceEE
Confidence 2222222222 256787776532 577777777899999654321 111221 122 2789885 22 2333
Q ss_pred EEEcCCcccccc
Q 045821 317 VIDVGNIGNIGG 328 (352)
Q Consensus 317 ~~d~~~~~w~~~ 328 (352)
.-+-.-.+|.+.
T Consensus 682 ~S~D~G~tW~~~ 693 (737)
T 2cn3_A 682 RSDDAGKTWVRI 693 (737)
T ss_dssp EESSTTSSCEEC
T ss_pred EeCCCCCCCEec
Confidence 333345578764
No 304
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=83.55 E-value=29 Score=34.61 Aligned_cols=104 Identities=9% Similarity=-0.121 Sum_probs=52.1
Q ss_pred CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeec---
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHA--- 242 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~--- 242 (352)
++..+.++.+ ..+.++|..+.+-...-... ....++. -+++..+.|+.++ .+..||..+.+-...
T Consensus 69 g~~L~S~s~D--~~v~lWd~~~~~~~~~~~~~---~~V~~v~~sp~g~~l~sgs~dg-----~V~lwd~~~~~~~~~~i~ 138 (902)
T 2oaj_A 69 GIYLVVINAK--DTVYVLSLYSQKVLTTVFVP---GKITSIDTDASLDWMLIGLQNG-----SMIVYDIDRDQLSSFKLD 138 (902)
T ss_dssp TTEEEEEETT--CEEEEEETTTCSEEEEEECS---SCEEEEECCTTCSEEEEEETTS-----CEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECc--CeEEEEECCCCcEEEEEcCC---CCEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCccccceec
Confidence 4444444433 78889999887543211111 1111222 2566666655442 477888877653211
Q ss_pred ------CCCCCCCCCCcEEEE---CCEEEEEecCCCCeEEEEeCCCCceE
Q 045821 243 ------DANMASGWRGPAVVV---DDALYVLDQSSGTKLMMWQKESREWS 283 (352)
Q Consensus 243 ------~~~~~~~~~~~~~~~---~~~l~~~gg~~~~~v~~yd~~~~~W~ 283 (352)
.....+...-..+.+ ++.++++|+.++ .+ +||..+++-.
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg-~v-lWd~~~~~~~ 186 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV-TL-TYSLVENEIK 186 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC-EE-EEETTTTEEE
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEeCCC-cE-EEECCCCceE
Confidence 010111111112322 235666776655 78 9999987643
No 305
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=83.27 E-value=21 Score=30.69 Aligned_cols=64 Identities=8% Similarity=0.062 Sum_probs=36.1
Q ss_pred CCEEEEEccCCCCCCceE-EEEEeCCCCceee-cCCC-CCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCC
Q 045821 211 DGKIYIRCSASAATSHVC-ALVYEPSTDSWLH-ADAN-MASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 211 ~g~iyv~GG~~~~~~~~~-i~~yd~~~~~W~~-~~~~-~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
+|++.+.|+.++ . +..+|..+.+-.. +... ........+..-++++++.|+.++ .+.+||....
T Consensus 206 ~g~~l~s~s~d~-----~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~-~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDG-----TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW-TLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTC-----SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC-EEEEEESSCC
T ss_pred CCCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC-EEEEEEccCC
Confidence 677777766553 3 7788887654332 2110 111101111223677777777766 8999998754
No 306
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=82.66 E-value=5.6 Score=37.82 Aligned_cols=145 Identities=11% Similarity=0.088 Sum_probs=75.3
Q ss_pred eEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCC-ee--Eec----CCCCCcceeeeeEEE--CCEEEEEeCCCCCCceE
Q 045821 113 MGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMN-TW--TDA----APMSTARCYFPCGVL--NQKIYCIGGLGDTHSWD 183 (352)
Q Consensus 113 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~-~W--~~~----~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~ 183 (352)
=++....+++|+|-| ..+|+++.... .. ..+ +.+|. .. -++... ++++|++-| +.++
T Consensus 447 DAit~~rg~~yfFKg--------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~I-DAA~~~~~~~k~yFFkG----~~yW 512 (631)
T 1ck7_A 447 DGIAQIRGEIFFFKD--------RFIWRTVTPRDKPMGPLLVATFWPELPE-KI-DAVYEAPQEEKAVFFAG----NEYW 512 (631)
T ss_dssp SEEEECSSSEEEECS--------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SC-SBCCEETTTTEEEEEET----TEEE
T ss_pred ceeEecCCcEEEEcC--------CEEEEEcCCCCCCCCceeccccCCCCCc-cc-eEEEEECCCCEEEEEec----CEEE
Confidence 345667889999976 45677665432 11 111 11221 11 122222 578999988 7889
Q ss_pred EEeCCCC--cE-EEecC--CCCcc-cceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceee-----cCCC-CCCC
Q 045821 184 VYDPRTN--NW-KLHTE--PNIFT-EIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLH-----ADAN-MASG 249 (352)
Q Consensus 184 ~yd~~t~--~W-~~~~~--~~~~~-~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-----~~~~-~~~~ 249 (352)
+|+..+- .+ +.|.. .|... ..-++.. .++++|++-|. ..|+||..+++-.. +... +...
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~-------~ywryd~~~~~vd~gYPk~i~~~w~G~p 585 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD-------KFWRYNEVKKKMDPGFPKLIADAWNAIP 585 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT-------EEEEEETTTTEECTTCCEETTTSCSSCC
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC-------EEEEEcCCcccccCCCCcchHhhcCCCC
Confidence 9986321 01 12221 11111 1112332 36899999654 38999976553211 1100 0101
Q ss_pred CC-CcEEEE--CCEEEEEecCCCCeEEEEeCCCCc
Q 045821 250 WR-GPAVVV--DDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 250 ~~-~~~~~~--~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
.. -+++.. ++++|++-|. ..|+||.....
T Consensus 586 ~~iDAAf~~~~~g~~YFFkG~---~Ywr~d~~~~~ 617 (631)
T 1ck7_A 586 DNLDAVVDLQGGGHSYFFKGA---YYLKLENQSLK 617 (631)
T ss_dssp TTCCEEECCTTSCBCEEEETT---EEECCBTTBTT
T ss_pred CCCcEeEEEcCCCeEEEEECC---EEEEEeCccce
Confidence 11 122333 3789999886 78999886543
No 307
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=79.80 E-value=29 Score=29.91 Aligned_cols=147 Identities=11% Similarity=0.042 Sum_probs=65.3
Q ss_pred CeEEEEECC-CCeeEecCCCC--CcceeeeeEEE--CC-EEEEEeCCCCCCceEEE--eCCCCcEE----EecCCCCc--
Q 045821 136 SEVYCYDAS-MNTWTDAAPMS--TARCYFPCGVL--NQ-KIYCIGGLGDTHSWDVY--DPRTNNWK----LHTEPNIF-- 201 (352)
Q Consensus 136 ~~~~~~d~~-t~~W~~~~~~~--~~r~~~~~~~~--~~-~iyv~gG~~~~~~v~~y--d~~t~~W~----~~~~~~~~-- 201 (352)
+.+++||.. +++...+.... ..-.......+ ++ .+|+.+..+ ..+.+| |..+++.. .+..++..
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG--NRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC--CeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 578899987 67654432221 10111111222 44 677765433 455555 55566543 23333322
Q ss_pred -cc-------ceeEEE-E--CC-EEEEEccCCCCCCceEEEEEeCC-CCceee----cCCCCCCCCCCcEEEE---CCEE
Q 045821 202 -TE-------IEDSFV-M--DG-KIYIRCSASAATSHVCALVYEPS-TDSWLH----ADANMASGWRGPAVVV---DDAL 261 (352)
Q Consensus 202 -~~-------~~~~~~-~--~g-~iyv~GG~~~~~~~~~i~~yd~~-~~~W~~----~~~~~~~~~~~~~~~~---~~~l 261 (352)
.. ....+. + +| .||+............+..|+.. +++... ++.. ...-...++.- +++.
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~-~~~~~~~a~sp~~~dg~~ 323 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP-TSGGHSNAVSPCPWSDEW 323 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS-SCCTTCCCEEECTTCTTE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC-CCCcccceecCCCcCCCE
Confidence 11 122222 2 55 56765321111111246667654 455543 2111 11112223444 4444
Q ss_pred EEEecCCCCeEEEEeCCCCceEEc
Q 045821 262 YVLDQSSGTKLMMWQKESREWSPV 285 (352)
Q Consensus 262 ~~~gg~~~~~v~~yd~~~~~W~~~ 285 (352)
+++++..++.+.+|+.+.+.-+.+
T Consensus 324 l~v~~~~~~~v~v~~~~~~~l~~~ 347 (365)
T 1jof_A 324 MAITDDQEGWLEIYRWKDEFLHRV 347 (365)
T ss_dssp EEEECSSSCEEEEEEEETTEEEEE
T ss_pred EEEEEcCCCeEEEEEEchhhCcee
Confidence 444443334888887766644433
No 308
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=79.32 E-value=32 Score=30.11 Aligned_cols=116 Identities=11% Similarity=-0.038 Sum_probs=57.9
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCC---CCCCCCeEEEEECC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGW---SEDATSEVYCYDAS 144 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~~d~~ 144 (352)
+.++|+.-+........+++||+ .+.+- +..++.. ...+..+..-+..+|+..-... .....+.+.+||+.
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~--~t~~~--~~~i~~g--~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDA--GSGSI--LGHVNGG--FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEEC--CCCeE--EEEecCC--CCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 57788884310111116788898 76653 3344421 1222222223557888752211 11234678899998
Q ss_pred CCee-EecCCCC-Ccc-----eeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcE
Q 045821 145 MNTW-TDAAPMS-TAR-----CYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNW 192 (352)
Q Consensus 145 t~~W-~~~~~~~-~~r-----~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W 192 (352)
+.+- ..++ ++ .+| .....+. -+..+|+..... .+.+.++| .+++-
T Consensus 106 t~~~~~~i~-~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-~~~v~viD-~t~~~ 159 (373)
T 2mad_H 106 TFLPIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GPAVGLVV-QGGSS 159 (373)
T ss_pred CCcEEEEEE-CCCccccccCCCccceEECCCCCEEEEEecCC-CCeEEEEE-CCCCE
Confidence 7653 2222 11 111 1112222 245688775321 26789999 88754
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=75.43 E-value=39 Score=29.16 Aligned_cols=228 Identities=9% Similarity=0.033 Sum_probs=108.9
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCc----ccCCcceEEEE----ECCEEEEEeCC----C---CCC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPAR----TLRRKGMGFEV----LGKNAYLLGGC----G---WSE 132 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~----~~~~~~~~~~~----~~~~iyv~GG~----~---~~~ 132 (352)
++.+|+. -. -.-.+..+|+ ..+.-..+ ..+.. .....-.++.. -.+.|+++.-. . ...
T Consensus 24 ~g~~~vs-~l---~~g~V~~~~~--~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 24 RQVFYQS-NL---YKGRIEVYNP--KTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp TTEEEEE-ET---TTTEEEEECT--TTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CCEEEEE-ec---cCCEEEEEcC--CCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 4666654 11 1234666788 76665555 33321 01112244555 25678875210 0 111
Q ss_pred CCCCeEEEEECC---CCeeEecCCCC---Cc-------ce-eeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCc---EE
Q 045821 133 DATSEVYCYDAS---MNTWTDAAPMS---TA-------RC-YFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNN---WK 193 (352)
Q Consensus 133 ~~~~~~~~~d~~---t~~W~~~~~~~---~~-------r~-~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~---W~ 193 (352)
.....+.+||+. +++-....+++ .. +. ...-..+ +|.+||.+.... ..++++++.... |-
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~-~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM-PAIARVSADGKTVSTFA 175 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS-CEEEEECTTSCCEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC-CeEEEEeCCCCEEeeee
Confidence 235678999988 55422222221 11 21 2222223 589999766442 468888887542 53
Q ss_pred EecCCCCcc-cceeEEEE-CC-EEEEEccCCCCCCceEEEEEeCCCCceeecCCC---CCCCCCCc----EEEECCEEEE
Q 045821 194 LHTEPNIFT-EIEDSFVM-DG-KIYIRCSASAATSHVCALVYEPSTDSWLHADAN---MASGWRGP----AVVVDDALYV 263 (352)
Q Consensus 194 ~~~~~~~~~-~~~~~~~~-~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~---~~~~~~~~----~~~~~~~l~~ 263 (352)
.-.+....+ ....++.. +| .|++..+ . ..+++||..+....+++.. ........ ....+|++++
T Consensus 176 ~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vll 249 (334)
T 2p9w_A 176 WESGNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVL 249 (334)
T ss_dssp ECCCCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEE
T ss_pred ecCCCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEE
Confidence 222111112 22345555 45 5666643 2 2588999874322122211 00011111 2236898866
Q ss_pred EecCCCCeEEEEeCCCCceEEcc---CCCCCcCCCCceEE-E----eCCEEEEEcC
Q 045821 264 LDQSSGTKLMMWQKESREWSPVG---RLSTLLTRPPCKLV-A----IGKTIFVIGK 311 (352)
Q Consensus 264 ~gg~~~~~v~~yd~~~~~W~~~~---~~~~~~~~~~~~~~-~----~~~~i~v~gG 311 (352)
+....+..+.+.+.+ + |.... ..|..+...+++.+ . .+++||++.+
T Consensus 250 V~~~~~~~~~l~S~D-g-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 250 VGARAPYAISFRSWD-N-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp EEEETTEEEEEECSS-T-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEEC
T ss_pred EEcCCCCEEEEECCC-C-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEee
Confidence 654333234444443 3 98664 33332212333333 3 5789999864
No 310
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=75.23 E-value=16 Score=34.67 Aligned_cols=123 Identities=10% Similarity=0.112 Sum_probs=64.3
Q ss_pred eEEEECCEEEEEccCCCCCCceEEEEEeCCCC----------ceeecCCCCCCCCCCcEEE--ECCEEEEEecCCCCeEE
Q 045821 206 DSFVMDGKIYIRCSASAATSHVCALVYEPSTD----------SWLHADANMASGWRGPAVV--VDDALYVLDQSSGTKLM 273 (352)
Q Consensus 206 ~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~----------~W~~~~~~~~~~~~~~~~~--~~~~l~~~gg~~~~~v~ 273 (352)
++...+|++|++-|.. .|+++.... .|..++. ..-+++. .++++|++-|. ..|
T Consensus 448 Ait~~rg~~yfFKg~~-------yWr~~~~~~~~~~P~~Is~~wp~LP~-----~IDAA~~~~~~~k~yFFkG~---~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKDRF-------IWRTVTPRDKPMGPLLVATFWPELPE-----KIDAVYEAPQEEKAVFFAGN---EYW 512 (631)
T ss_dssp EEEECSSSEEEECSSE-------EEEESCTTSCCEEEEEGGGTCTTSCS-----SCSBCCEETTTTEEEEEETT---EEE
T ss_pred eeEecCCcEEEEcCCE-------EEEEcCCCCCCCCceeccccCCCCCc-----cceEEEEECCCCEEEEEecC---EEE
Confidence 4556789999996543 777765442 2332221 1112222 36889999876 899
Q ss_pred EEeCCCC--ce-EEcc--CCCCCcCCCCceEE-EeCCEEEEEcCCceEEEEEcCCcccccce--EEeccCCCCCCCCcc
Q 045821 274 MWQKESR--EW-SPVG--RLSTLLTRPPCKLV-AIGKTIFVIGKGCSAVVIDVGNIGNIGGI--MVSSSIPKLNDNDDI 344 (352)
Q Consensus 274 ~yd~~~~--~W-~~~~--~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~d~~~~~w~~~~--~~~~~~~~~~~~~~~ 344 (352)
+||..+. -+ ..+. .+|.....-.+++. ..++++|+|-|. ..+.||..+.+-..+. .+...+++++.+.+.
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~-~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDA 590 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD-KFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDA 590 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT-EEEEEETTTTEECTTCCEETTTSCSSCCTTCCE
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC-EEEEEcCCcccccCCCCcchHhhcCCCCCCCcE
Confidence 9985310 00 1111 12221112222332 247899999876 5777997765433332 122234555554433
No 311
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=73.50 E-value=69 Score=31.05 Aligned_cols=147 Identities=7% Similarity=-0.005 Sum_probs=76.9
Q ss_pred CCeEEEEECCCC--ee--EecCCCCCcceeeeeE-EECCEEEEEeCCC-CC-CceEEEeCCC-CcEEE-ecCCCCcccce
Q 045821 135 TSEVYCYDASMN--TW--TDAAPMSTARCYFPCG-VLNQKIYCIGGLG-DT-HSWDVYDPRT-NNWKL-HTEPNIFTEIE 205 (352)
Q Consensus 135 ~~~~~~~d~~t~--~W--~~~~~~~~~r~~~~~~-~~~~~iyv~gG~~-~~-~~v~~yd~~t-~~W~~-~~~~~~~~~~~ 205 (352)
.++++++|..+. .+ +.+.+-.. ...+... ..++.+|+....+ .. ..++.+|..+ ..|+. +-+........
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~ 372 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFME 372 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEE
Confidence 567888888765 45 55533211 1112222 2377888887654 22 6788899876 67876 43222221222
Q ss_pred eEEEECCEEEEEccCCCCCCceEEEEEeC-------CCCc-eeecCCCCCCCCCCcEE------EEC-CEEEEE-ecCCC
Q 045821 206 DSFVMDGKIYIRCSASAATSHVCALVYEP-------STDS-WLHADANMASGWRGPAV------VVD-DALYVL-DQSSG 269 (352)
Q Consensus 206 ~~~~~~g~iyv~GG~~~~~~~~~i~~yd~-------~~~~-W~~~~~~~~~~~~~~~~------~~~-~~l~~~-gg~~~ 269 (352)
.....++.|++.... .....++.+|+ .+.. -+.+.-+ .......+ ..+ +.+++. .+...
T Consensus 373 ~~~~~~~~lv~~~~~---~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~--~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~ 447 (751)
T 2xe4_A 373 SIAVRSNYLVVAGRR---AGLTRIWTMMADSQDGVFKAGTGLREVVME--EPIFTVHLVESQMLEYEEPTFRMEYSSLAT 447 (751)
T ss_dssp EEEECSSEEEEEEEE---TTEEEEEEEECCTTTSCCCTTTCCEECCCC--CSSCEEEECGGGCCCTTCSCEEEEEEETTE
T ss_pred EEEEECCEEEEEEEe---CCEEEEEEEecccccccccCCccceEECCC--CceeEEEeccCcccCCCCCEEEEEEeCCCC
Confidence 334456777776422 22346888886 3333 4444321 11111111 112 334333 33222
Q ss_pred -CeEEEEeCCCCceEEccC
Q 045821 270 -TKLMMWQKESREWSPVGR 287 (352)
Q Consensus 270 -~~v~~yd~~~~~W~~~~~ 287 (352)
..++.||..+++.+.+..
T Consensus 448 P~~~~~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 448 PNTWFDVSPQDHSRTAVKV 466 (751)
T ss_dssp EEEEEEECTTTCCEEEEEE
T ss_pred CCEEEEEECCCCcEEEEec
Confidence 478999998888776653
No 312
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=71.84 E-value=53 Score=29.02 Aligned_cols=116 Identities=9% Similarity=-0.063 Sum_probs=60.6
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCCC---CCCCCCeEEEEEC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCGW---SEDATSEVYCYDA 143 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~---~~~~~~~~~~~d~ 143 (352)
++++|+.-.......-.++++|+ .+++-. ...+. ....+....- +..+|+...... .....+.+.++|+
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~--~t~~v~--~~I~v---G~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDG--EAGRVI--GMIDG---GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEET--TTTEEE--EEEEE---CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCEEEEEcCcccCCCCEEEEEEC--CCCeEE--EEEEC---CCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 78899984421112346788898 776543 22221 1111322222 445888742100 0012356899999
Q ss_pred CCCeeE-ecCCCCC-c-----ceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcE
Q 045821 144 SMNTWT-DAAPMST-A-----RCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNW 192 (352)
Q Consensus 144 ~t~~W~-~~~~~~~-~-----r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W 192 (352)
.+++-. .++ .+. . ...+..+.- +..+|+...... +.+.+.|..+++=
T Consensus 117 ~t~~v~~~I~-v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~-~~VsVID~~t~~v 172 (386)
T 3sjl_D 117 VTLLPTADIE-LPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA-PAVGVVDLEGKAF 172 (386)
T ss_dssp TTCCEEEEEE-ETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS-CEEEEEETTTTEE
T ss_pred CCCeEEEEEE-CCCccccccCCCCceEEEcCCCCEEEEEEcCCC-CeEEEEECCCCcE
Confidence 998743 232 111 1 122233333 457888753211 6789999998863
No 313
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=70.62 E-value=41 Score=32.82 Aligned_cols=150 Identities=8% Similarity=-0.012 Sum_probs=75.7
Q ss_pred CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE--E-CCEEEEEccCCCCCCceEEEEEeCCCCceeecCC
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV--M-DGKIYIRCSASAATSHVCALVYEPSTDSWLHADA 244 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~--~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~ 244 (352)
..+|+.++... ..++.=.-.-.+|+.+..++... ..... . .+.+|+. . . ..+++-.-...+|+.+..
T Consensus 557 ~~~~~~~~~~~-~~v~~S~D~G~tW~~~~~l~~~~--~~i~~d~~~~~~~y~g-~-~-----g~v~~S~DgG~tW~~~~~ 626 (763)
T 3a0f_A 557 TFVWSPSKADG-KGPYTSSDYGKTWTAPSGLSKQT--TGIAADRVQANTFYVY-V-E-----GDFFVSTDGGKSYTKKGN 626 (763)
T ss_dssp CEEEECSSCCS-SCCEEESSTTSCCBCCBSCCCCC--SCEEECSSSTTCEEEE-E-T-----TEEEEESSTTSBCEEECB
T ss_pred cEEEEecccCC-CceEEeCCCCCCCeecCCCCCCc--ceEEEeccCCCEEEEE-c-C-----CCEEEEeCCCcCcccccc
Confidence 46777663111 23333233346899886444321 11211 1 2455554 1 1 134444444568998743
Q ss_pred CCC---CCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcC--CCCceEEEe---CCEEEEEc----
Q 045821 245 NMA---SGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLT--RPPCKLVAI---GKTIFVIG---- 310 (352)
Q Consensus 245 ~~~---~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~--~~~~~~~~~---~~~i~v~g---- 310 (352)
..+ .......+. .++.||+.+... .|++-+-...+|+++..++.... ...+.++.. .+.||++|
T Consensus 627 ~lp~~~~~~~~i~~~~~~~~~l~~~~~~~--~l~~S~D~G~tW~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~ 704 (763)
T 3a0f_A 627 GLPCCWTYTGTPVTSNLRAGELWVSVKGV--GIYHSTDFGNTFTALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIPSA 704 (763)
T ss_dssp TSCCSSCCCEEEEECSSSTTCEEEEETTT--EEEEESSTTSBCEECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEECST
T ss_pred CCCcccCccccEEECCCCCCcEEEEcCCC--eEEEEcCCCCCceEccCCCcccccceeEEeeecCCCCCceEEEEEEccc
Confidence 332 111111111 246788766432 67777667789999986554210 011222221 35799998
Q ss_pred -CCceEEEEEcCCcccccce
Q 045821 311 -KGCSAVVIDVGNIGNIGGI 329 (352)
Q Consensus 311 -G~~~~~~~d~~~~~w~~~~ 329 (352)
+...++.-+-.-.+|.+..
T Consensus 705 ~~~~gl~~S~D~G~tW~~~~ 724 (763)
T 3a0f_A 705 SQPEGLYMSTDNGGLWTRLN 724 (763)
T ss_dssp TSCSEEEEESSTTSCCEECS
T ss_pred CCCcEEEEeCCCCCCcEecc
Confidence 5555665555566787643
No 314
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=69.56 E-value=52 Score=28.03 Aligned_cols=111 Identities=12% Similarity=0.178 Sum_probs=56.8
Q ss_pred CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCC---CCCCCCC-cEEEE--CCEEEEEecCC----CCeEEEEeCCCC
Q 045821 211 DGKIYIRCSASAATSHVCALVYEPSTDSWLHADAN---MASGWRG-PAVVV--DDALYVLDQSS----GTKLMMWQKESR 280 (352)
Q Consensus 211 ~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~---~~~~~~~-~~~~~--~~~l~~~gg~~----~~~v~~yd~~~~ 280 (352)
+|++|+.......+. ..++.++ +.+-...+.. ....... ..+.+ +++||++.... ...|++||+.++
T Consensus 27 ~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg 103 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN 103 (343)
T ss_dssp TSCEEEEECGGGCCS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT
T ss_pred CCCEEEEeCCCCCCc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC
Confidence 789998742211111 3466666 3443333211 1111111 12333 58899987321 238999999988
Q ss_pred ceEEccCCCCCc---CCCCceEEEe--CCEEEEEc----CCceEEEEEcCCcc
Q 045821 281 EWSPVGRLSTLL---TRPPCKLVAI--GKTIFVIG----KGCSAVVIDVGNIG 324 (352)
Q Consensus 281 ~W~~~~~~~~~~---~~~~~~~~~~--~~~i~v~g----G~~~~~~~d~~~~~ 324 (352)
+-...-.++... ......+++- ++.+|+.. +...+.+||+++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 104 QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 743322232111 1122334443 57899874 34467789987543
No 315
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=68.67 E-value=65 Score=28.80 Aligned_cols=227 Identities=14% Similarity=0.095 Sum_probs=109.2
Q ss_pred CEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCCCCCCCCeEEEEECCCCee
Q 045821 69 TWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATSEVYCYDASMNTW 148 (352)
Q Consensus 69 ~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W 148 (352)
+.||+.-. . ..++.+|+ .++....+.... ..........++.||+..-... .....+..++.... +
T Consensus 153 g~Lyv~D~----~-~~I~~id~--~~g~v~~~~~~~----~~P~giavd~dG~lyVad~~~~--~~~~gv~~~~~~~~-~ 218 (433)
T 4hw6_A 153 DDLYWVGQ----R-DAFRHVDF--VNQYVDIKTTNI----GQCADVNFTLNGDMVVVDDQSS--DTNTGIYLFTRASG-F 218 (433)
T ss_dssp CEEEEECB----T-SCEEEEET--TTTEEEEECCCC----SCEEEEEECTTCCEEEEECCSC--TTSEEEEEECGGGT-T
T ss_pred CEEEEEeC----C-CCEEEEEC--CCCEEEEeecCC----CCccEEEECCCCCEEEEcCCCC--cccceEEEEECCCC-e
Confidence 67887722 1 46777898 888777665421 1122212222455888753221 11234555554322 2
Q ss_pred E---ecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcE-EEecCCCCcccceeEEE-ECC-EEEEEccC
Q 045821 149 T---DAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNW-KLHTEPNIFTEIEDSFV-MDG-KIYIRCSA 220 (352)
Q Consensus 149 ~---~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W-~~~~~~~~~~~~~~~~~-~~g-~iyv~GG~ 220 (352)
. .++.+.. ...+++. ++.||+.-... ..+++||+.+..- +.+............++ -++ .||+.--.
T Consensus 219 ~~~~~~~~~~~---P~giavd~~~G~lyv~d~~~--~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 219 TERLSLCNARG---AKTCAVHPQNGKIYYTRYHH--AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp CCEEEEEECSS---BCCCEECTTTCCEEECBTTC--SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred eccccccccCC---CCEEEEeCCCCeEEEEECCC--CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 1 2221111 1233333 57888875432 6799999987765 33321111111112232 244 59998421
Q ss_pred CCCCCceEEEEEeCC--CCcee---ec-CCCCC----------CCCCCc-EEE-----------ECCEEEEEecCCCCeE
Q 045821 221 SAATSHVCALVYEPS--TDSWL---HA-DANMA----------SGWRGP-AVV-----------VDDALYVLDQSSGTKL 272 (352)
Q Consensus 221 ~~~~~~~~i~~yd~~--~~~W~---~~-~~~~~----------~~~~~~-~~~-----------~~~~l~~~gg~~~~~v 272 (352)
...|++++.. +.... .+ ..... .....+ .+. .++.||+....++ .|
T Consensus 294 -----~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~-~I 367 (433)
T 4hw6_A 294 -----KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSH-TV 367 (433)
T ss_dssp -----TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTT-EE
T ss_pred -----CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCC-EE
Confidence 2357776643 33321 11 10000 011112 132 3567888765443 89
Q ss_pred EEEeCCCCceEEccCCCC--------------CcCCCCceEEEe--CCEEEEEc-CCceEEEEEcC
Q 045821 273 MMWQKESREWSPVGRLST--------------LLTRPPCKLVAI--GKTIFVIG-KGCSAVVIDVG 321 (352)
Q Consensus 273 ~~yd~~~~~W~~~~~~~~--------------~~~~~~~~~~~~--~~~i~v~g-G~~~~~~~d~~ 321 (352)
.++|+. +....+...+. .....-.+++.. ++.|||.- +...+..+++|
T Consensus 368 ~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 368 RVLTPE-GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEECTT-SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEECCC-CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 999984 45555542211 001122345554 67888874 44455566665
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=67.12 E-value=18 Score=31.44 Aligned_cols=108 Identities=12% Similarity=0.024 Sum_probs=49.7
Q ss_pred CEEEEEeCCCCCCceEEEeCCCC--cEEEecC---CCCcccceeEEEECCEEEEEcc-CCCCCCceEEEEEeCCCCceee
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTN--NWKLHTE---PNIFTEIEDSFVMDGKIYIRCS-ASAATSHVCALVYEPSTDSWLH 241 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~--~W~~~~~---~~~~~~~~~~~~~~g~iyv~GG-~~~~~~~~~i~~yd~~~~~W~~ 241 (352)
+.+|+... + ..++.+|..++ .|+.-.. ++...... +...++.+|++.. .++ .++.+|..++.|.-
T Consensus 11 ~~V~v~t~-d--G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~-~~~~~~~~~vv~p~~dG-----~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 11 DILIAADV-E--GGLHAVDRRNGHIIWSIEPENFQPLIEIQEP-SRLETYETLIIEPFGDG-----NIYYFNAHQGLQKL 81 (339)
T ss_dssp EEEEEEET-T--SCEEEEETTTTEEEEEECGGGSCCSEECCCS-CTTTSSEEEEECCSTTT-----EEEEEETTTEEEEE
T ss_pred CEEEEEeC-C--CeEEEEECCCCcEEEEecCCccCCcEEecCC-ccccCCcEEEEEECCCC-----EEEEEECCCCcEEe
Confidence 44444332 2 56788888776 4875432 11111101 1112456666631 121 57777877665532
Q ss_pred c---CCCC---CCCCCCcEEE------ECCEEEEEecCCCCeEEEEeCCCCc--eEEc
Q 045821 242 A---DANM---ASGWRGPAVV------VDDALYVLDQSSGTKLMMWQKESRE--WSPV 285 (352)
Q Consensus 242 ~---~~~~---~~~~~~~~~~------~~~~l~~~gg~~~~~v~~yd~~~~~--W~~~ 285 (352)
- +... +....+..++ ..+...++|...+ .++.+|..+++ |+.-
T Consensus 82 ~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g-~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 82 PLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRT-IMYTINMLNGEIISAFG 138 (339)
T ss_dssp EEEHHHHHTTCSEEEECC----------CCEEEEECEEEE-EEEEEETTTCCEEEEES
T ss_pred eeccccceeccccccCCCceeecccccccCCEEEEEecCC-EEEEEECCCCcEEEEEe
Confidence 1 1000 0000111122 1444455555554 78888888766 6543
No 317
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=64.24 E-value=1.2e+02 Score=30.17 Aligned_cols=145 Identities=8% Similarity=0.058 Sum_probs=71.7
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANM 246 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~ 246 (352)
++++.+.|+.+ ..+.+||..+..-... ......-..+....|++.+.++.+ ..+..+|..+.+-...-.
T Consensus 28 dg~~lAsgs~D--g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~~~-- 96 (902)
T 2oaj_A 28 TQNLLAIATVT--GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTTVF-- 96 (902)
T ss_dssp TTTEEEEEETT--SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEEEE--
T ss_pred CCCEEEEEeCC--CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEEEc--
Confidence 45556666654 5677787766543222 111111122333346644554433 257788887765322111
Q ss_pred CCCCCCcEEE--ECCEEEEEecCCCCeEEEEeCCCCceEEcc--------CCCCCcCCCCceEEEe--CCEEEEEcCCce
Q 045821 247 ASGWRGPAVV--VDDALYVLDQSSGTKLMMWQKESREWSPVG--------RLSTLLTRPPCKLVAI--GKTIFVIGKGCS 314 (352)
Q Consensus 247 ~~~~~~~~~~--~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~--------~~~~~~~~~~~~~~~~--~~~i~v~gG~~~ 314 (352)
....-..+. -+++.++.|+.++ .+.+||..+..-.... ..+......-.++... ++.+++.|+.+.
T Consensus 97 -~~~~V~~v~~sp~g~~l~sgs~dg-~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg 174 (902)
T 2oaj_A 97 -VPGKITSIDTDASLDWMLIGLQNG-SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV 174 (902)
T ss_dssp -CSSCEEEEECCTTCSEEEEEETTS-CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC
T ss_pred -CCCCEEEEEECCCCCEEEEEcCCC-cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC
Confidence 110111122 2566667777666 8999999887653211 0111111112233332 235666776665
Q ss_pred EEEEEcCCcc
Q 045821 315 AVVIDVGNIG 324 (352)
Q Consensus 315 ~~~~d~~~~~ 324 (352)
..++|++...
T Consensus 175 ~vlWd~~~~~ 184 (902)
T 2oaj_A 175 TLTYSLVENE 184 (902)
T ss_dssp EEEEETTTTE
T ss_pred cEEEECCCCc
Confidence 4499987654
No 318
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=64.11 E-value=81 Score=28.24 Aligned_cols=117 Identities=9% Similarity=-0.079 Sum_probs=60.1
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCC---CCCCCCCeEEEEECC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCG---WSEDATSEVYCYDAS 144 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~~d~~ 144 (352)
..++|+.-.......-.+.++|+ .+++-...-+.. ...+..+..-+..+|+.--.. ......+.+.++|+.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~--~t~~vv~~I~vG----~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDG--STGRILGMTDGG----FLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEET--TTTEEEEEEEEC----SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCEEEEECCCcCCCCCeEEEEEC--CCCEEEEEEECC----CCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 56899985531111156778898 776543222222 112222211245688874100 000124678999999
Q ss_pred CCeeE-ecCCCC-Cc-----ceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcE
Q 045821 145 MNTWT-DAAPMS-TA-----RCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNW 192 (352)
Q Consensus 145 t~~W~-~~~~~~-~~-----r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W 192 (352)
+++-. .++ ++ .. ...+..+.- +.++|+..... .+.+.++|..+++=
T Consensus 158 t~~vv~~I~-v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~-~~~VsVID~~t~kv 212 (426)
T 3c75_H 158 TFLPIADIE-LPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP-APAVGVVDLEGKTF 212 (426)
T ss_dssp TCCEEEEEE-ETTCCCCCBSCCGGGSEECTTSSEEEEEECSS-SCEEEEEETTTTEE
T ss_pred CCcEEEEEE-CCCccccccCCCcceEEEcCCCCEEEEEecCC-CCeEEEEECCCCeE
Confidence 98743 232 11 11 112233333 45788875321 16799999998763
No 319
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=61.68 E-value=1.2e+02 Score=29.31 Aligned_cols=124 Identities=7% Similarity=0.111 Sum_probs=67.5
Q ss_pred eEEECCEEEEEeCCC--------CCCceEEEeCCC--------CcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCc
Q 045821 163 CGVLNQKIYCIGGLG--------DTHSWDVYDPRT--------NNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSH 226 (352)
Q Consensus 163 ~~~~~~~iyv~gG~~--------~~~~v~~yd~~t--------~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~ 226 (352)
....++.+|+....+ ....+...|..+ ..|+.+-.+............++.|++..- . ...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~-~--~~~ 371 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATY-D--NVV 371 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEE-E--TTE
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEE-E--CCE
Confidence 345688999976433 116778887654 469874323333333344555777777632 1 223
Q ss_pred eEEEEEeCCCCceeecC-CCCCCCCCCcEEE--E-CCEEEEE-ecCCC-CeEEEEeCCCCceEEccCCCC
Q 045821 227 VCALVYEPSTDSWLHAD-ANMASGWRGPAVV--V-DDALYVL-DQSSG-TKLMMWQKESREWSPVGRLST 290 (352)
Q Consensus 227 ~~i~~yd~~~~~W~~~~-~~~~~~~~~~~~~--~-~~~l~~~-gg~~~-~~v~~yd~~~~~W~~~~~~~~ 290 (352)
..+..+|+.++.|.... ...+......... . ++.+++. .+... ..++.||.. ++++.+...+.
T Consensus 372 ~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~ 440 (711)
T 4hvt_A 372 AKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALY 440 (711)
T ss_dssp EEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSS
T ss_pred EEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCc
Confidence 36788888888775322 1111111111111 1 3344443 34332 689999988 77777765543
No 320
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=59.47 E-value=1.3e+02 Score=29.04 Aligned_cols=151 Identities=7% Similarity=0.057 Sum_probs=76.7
Q ss_pred eeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCCCC----CCCCCCeEEEEECCC--------CeeEe
Q 045821 83 VCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGCGW----SEDATSEVYCYDASM--------NTWTD 150 (352)
Q Consensus 83 ~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~----~~~~~~~~~~~d~~t--------~~W~~ 150 (352)
...+..|.+..+..|.++ ..| +........++.+|+....+. .......+..+|..+ ..|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NMP-----SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKI 342 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CSC-----TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEE
T ss_pred eeEEEEcCCCCCCcceEe-ecC-----CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceE
Confidence 344555552223556666 233 222224567899999764331 112456788888654 36876
Q ss_pred -cCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEe--cCCCCcccceeEEE--E-CCEEEEEccCCCCC
Q 045821 151 -AAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLH--TEPNIFTEIEDSFV--M-DGKIYIRCSASAAT 224 (352)
Q Consensus 151 -~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~--~~~~~~~~~~~~~~--~-~g~iyv~GG~~~~~ 224 (352)
+++-. .+.--.....++.+++..-.+....+.++|+.++.|... .++|.... ..... . ++.+++.... ..
T Consensus 343 ~~~~~~-~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~-~~~~~~~~~~~~~~~~~ss--~~ 418 (711)
T 4hvt_A 343 LFTPTA-NEVFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNA-IFGMSSYEEEEEALITIEN--SI 418 (711)
T ss_dssp EECCCT-TEEEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTC-EEEEECCTTCSCEEEEEEC--SS
T ss_pred EECCCC-CCeEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeE-EEEEeecCcCCEEEEEEec--CC
Confidence 43322 223333444466666654333226788999888877421 12332211 11111 2 2344443221 13
Q ss_pred CceEEEEEeCCCCceeecCC
Q 045821 225 SHVCALVYEPSTDSWLHADA 244 (352)
Q Consensus 225 ~~~~i~~yd~~~~~W~~~~~ 244 (352)
....++.||.. ++++.+..
T Consensus 419 ~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 419 VPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp SCCEEEEECTT-SCEEEEEC
T ss_pred CCCEEEEEeCC-CcEEEEec
Confidence 33478888887 77766643
No 321
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=58.63 E-value=1.1e+02 Score=28.02 Aligned_cols=239 Identities=13% Similarity=0.064 Sum_probs=116.8
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEE--------E-CCEEEEEeCCCCCCCCCCeE
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEV--------L-GKNAYLLGGCGWSEDATSEV 138 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~--------~-~~~iyv~GG~~~~~~~~~~~ 138 (352)
++.||+.-.. ...+.++|+ .++....+.........+ -..++. . ++.+|+..-..........+
T Consensus 151 ~~~Lyv~~~~----~~~i~~ID~--~~~~v~~l~~~~~~~~~~-p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 151 KDHLYICYDG----HKAIQLIDL--KNRMLSSPLNINTIPTNR-IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEEEEEEET----EEEEEEEET--TTTEEEEEECCTTSSCSB-EEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred CCEEEEEECC----CCeEEEEEC--CCCEEEEEEccCccccCC-CcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 3668877432 345777899 888888776553210111 222333 2 34588875322110112457
Q ss_pred EEEECCC-CeeE------ecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCC-------CCc-EEE-------
Q 045821 139 YCYDASM-NTWT------DAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPR-------TNN-WKL------- 194 (352)
Q Consensus 139 ~~~d~~t-~~W~------~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~-------t~~-W~~------- 194 (352)
+.++... ++|. .++.. ...+.++.. ++.||+.--.. ..+.+||+. +.. |..
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~~---~~p~giavdp~~g~LYvtd~~~--g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAAY---KQCNGATIHPINGELYFNSYEK--GQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEEE---SCCCCEEECTTTCCEEEEETTT--TEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred EEEecCCCCceeecccceeeccC---CCceEEEEcCCCCeEEEEECCC--CEEEEEecccccccccCceeeccccccccc
Confidence 7777554 3443 22211 222444443 46888876433 569999997 443 422
Q ss_pred ----ecCCCCcccceeEEEE-CCE-EEEEccCCCCCCceEEEEE--eCCCCcee---ec-CCC----------CCCCCCC
Q 045821 195 ----HTEPNIFTEIEDSFVM-DGK-IYIRCSASAATSHVCALVY--EPSTDSWL---HA-DAN----------MASGWRG 252 (352)
Q Consensus 195 ----~~~~~~~~~~~~~~~~-~g~-iyv~GG~~~~~~~~~i~~y--d~~~~~W~---~~-~~~----------~~~~~~~ 252 (352)
+...+.......+++. +|. ||+.-- ....|+++ |..+.... .+ ... ....+..
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~-----~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVI-----NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEET-----TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeC-----CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 1111111111223332 454 888831 11256774 44443321 11 100 0111222
Q ss_pred c--EEEE---------CCEEEEEecCCCCeEEEEeCCCCceEEccCCCC--------------C------cCCCCceEEE
Q 045821 253 P--AVVV---------DDALYVLDQSSGTKLMMWQKESREWSPVGRLST--------------L------LTRPPCKLVA 301 (352)
Q Consensus 253 ~--~~~~---------~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~--------------~------~~~~~~~~~~ 301 (352)
+ .+.+ ++.||+....++ .|.++|+. +..+.++.... . ....-.++++
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~-rIr~i~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNF-CVRKVTPE-GIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGT-EEEEECTT-CBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred CeEEEEEccccccccCCCeEEEEECCCC-EEEEEeCC-CCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 2 2333 467888765444 89999965 45555542110 0 0112234555
Q ss_pred e--CCEEEEEc-CCceEEEEEcCCccc
Q 045821 302 I--GKTIFVIG-KGCSAVVIDVGNIGN 325 (352)
Q Consensus 302 ~--~~~i~v~g-G~~~~~~~d~~~~~w 325 (352)
. ++.|||.- +...+..++++.+.-
T Consensus 452 d~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 452 DDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred ECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 4 27899875 455666788776543
No 322
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=57.71 E-value=79 Score=26.01 Aligned_cols=189 Identities=6% Similarity=-0.074 Sum_probs=98.8
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE-CCEEEEEeCCCCCCceEEEeCCCCc--E--E
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL-NQKIYCIGGLGDTHSWDVYDPRTNN--W--K 193 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~gG~~~~~~v~~yd~~t~~--W--~ 193 (352)
++.+|++... ...++.+|+..+-++.++- ....-..+.+.. ++.++|..... ..+.+|+...+. | .
T Consensus 38 ~~~L~aV~d~------~~~I~~ld~~g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E~~--~~l~~~~v~~~~~i~~~~ 108 (255)
T 3qqz_A 38 SNTLFSTINK------PAAIVEMTTNGDLIRTIPL-DFVKDLETIEYIGDNQFVISDERD--YAIYVISLTPNSEVKILK 108 (255)
T ss_dssp TTEEEEEEET------TEEEEEEETTCCEEEEEEC-SSCSSEEEEEECSTTEEEEEETTT--TEEEEEEECTTCCEEEEE
T ss_pred CCEEEEEECC------CCeEEEEeCCCCEEEEEec-CCCCChHHeEEeCCCEEEEEECCC--CcEEEEEcCCCCeeeeee
Confidence 5789988643 4678999998666777643 211233444555 45555553322 567777765543 4 2
Q ss_pred Eec-CCC--Cccc-ceeEEEE--CCEEEEEccCCCCCCceEEEEEeC--CCCceeecCC----CCCCCCCCcEEE---EC
Q 045821 194 LHT-EPN--IFTE-IEDSFVM--DGKIYIRCSASAATSHVCALVYEP--STDSWLHADA----NMASGWRGPAVV---VD 258 (352)
Q Consensus 194 ~~~-~~~--~~~~-~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~--~~~~W~~~~~----~~~~~~~~~~~~---~~ 258 (352)
.+. ++. .... ..+.+.. ++++|+..... ...++.|+- .++.-+.+.. ......-..++. ..
T Consensus 109 ~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~----p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 109 KIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN----PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeccccccccccCCcceEEEeCCCCEEEEEECcC----CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 222 111 1111 1233332 45899985433 236778872 1211111111 000111122332 36
Q ss_pred CEEEEEecCCCCeEEEEeCCCCceEEccCCCCC-----cCCCCceEEE-eCCEEEEEcCCceEEEEEcC
Q 045821 259 DALYVLDQSSGTKLMMWQKESREWSPVGRLSTL-----LTRPPCKLVA-IGKTIFVIGKGCSAVVIDVG 321 (352)
Q Consensus 259 ~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~-----~~~~~~~~~~-~~~~i~v~gG~~~~~~~d~~ 321 (352)
+.+|++...+. .+..+|...+.-..+.-.+.. ...+.-+++. .++.|||.+..+-++.|...
T Consensus 185 g~lliLS~~s~-~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 185 NTLLVLSHESR-ALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp TEEEEEETTTT-EEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC-
T ss_pred CeEEEEECCCC-eEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEec
Confidence 78999987655 899999887744433322110 1123334444 36789999988777777654
No 323
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=54.51 E-value=63 Score=31.06 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=54.8
Q ss_pred CceEEEeCCCCcEEEecCCCCccc---ceeEEEE---CCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCc
Q 045821 180 HSWDVYDPRTNNWKLHTEPNIFTE---IEDSFVM---DGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGP 253 (352)
Q Consensus 180 ~~v~~yd~~t~~W~~~~~~~~~~~---~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~ 253 (352)
..+++-+-.-.+|+.+........ ...+++. .+++|++|..........+++=+-...+|+.+..+.... ...
T Consensus 65 ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p~~~~-~~l 143 (685)
T 3f6k_A 65 SKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPL-TQM 143 (685)
T ss_dssp EEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECSSCBS-SCC
T ss_pred CeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccCCCCCc-eEE
Confidence 345555556678999875322111 1233332 347999864332222335676666778999875422211 122
Q ss_pred EEEE--CCEEEEEecCCCCeEEEEeCCCCceEEcc
Q 045821 254 AVVV--DDALYVLDQSSGTKLMMWQKESREWSPVG 286 (352)
Q Consensus 254 ~~~~--~~~l~~~gg~~~~~v~~yd~~~~~W~~~~ 286 (352)
++.- .+.||..+ ..+ .+++=+-...+|+.+.
T Consensus 144 ~~~P~~~~~l~a~~-~~~-gly~S~DgG~TW~~i~ 176 (685)
T 3f6k_A 144 MYSPQNSDYLLALS-TEN-GLWVSKNFGGKWEEIH 176 (685)
T ss_dssp EEETTEEEEEEEEB-TTC-CEEEESSTTSSEEEEE
T ss_pred EEecCCCCEEEEEE-CCC-CEEEEeCCCCCcEEee
Confidence 2221 23344443 222 5777666677888774
No 324
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=51.04 E-value=1.3e+02 Score=26.50 Aligned_cols=65 Identities=9% Similarity=0.097 Sum_probs=37.5
Q ss_pred CCEEEEEecC--------CCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeCC--EEEEEc-CCceEEEEEcCCccc
Q 045821 258 DDALYVLDQS--------SGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGK--TIFVIG-KGCSAVVIDVGNIGN 325 (352)
Q Consensus 258 ~~~l~~~gg~--------~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~i~v~g-G~~~~~~~d~~~~~w 325 (352)
++++|+.... .++.|+++|.++.+-..-=.++. +.....+..++ .+|+.. +..++.+||..+..-
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC---CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 6789987431 11589999998876542211211 11112222343 578764 466788999987653
No 325
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=51.02 E-value=1.4e+02 Score=26.75 Aligned_cols=113 Identities=12% Similarity=-0.011 Sum_probs=59.4
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCC-------CCCceEEEeCCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLG-------DTHSWDVYDPRT 189 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~-------~~~~v~~yd~~t 189 (352)
...+|+....... ..+.+.++|+.+++-. ..++..... .++.- +..+|+..... ..+.+.++|+.+
T Consensus 84 ~~~vyV~n~~~~~--~~~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 84 ARRVYIQDPAHFA--AITQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TTEEEEEECTTTC--SSEEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCEEEEECCCcCC--CCCeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 4567877542111 1178999999988643 222222222 22222 45688874210 016799999999
Q ss_pred CcEE-EecCC--CC---ccc-ceeEEEECC-EEEEEccCCCCCCceEEEEEeCCCCcee
Q 045821 190 NNWK-LHTEP--NI---FTE-IEDSFVMDG-KIYIRCSASAATSHVCALVYEPSTDSWL 240 (352)
Q Consensus 190 ~~W~-~~~~~--~~---~~~-~~~~~~~~g-~iyv~GG~~~~~~~~~i~~yd~~~~~W~ 240 (352)
.+-. .++-. +. ... ...++.-+| ++|+..-. ..+.+.++|+.+++=.
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeEE
Confidence 8643 23211 11 011 122333344 78886311 1246889999887653
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=50.97 E-value=2.2e+02 Score=29.24 Aligned_cols=136 Identities=11% Similarity=0.108 Sum_probs=77.3
Q ss_pred CCCeEEEEECCCCeeEecCCCCCcceeeeeEEECCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccce-eEEEECC
Q 045821 134 ATSEVYCYDASMNTWTDAAPMSTARCYFPCGVLNQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIE-DSFVMDG 212 (352)
Q Consensus 134 ~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~-~~~~~~g 212 (352)
....+.+|+...++.+.+......-.-.+.+.++|++.+.-| +.+.+|+...++--+........... ...+.++
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig----~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~ 937 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN----STVRLYEWTTEKELRTECNHYNNIMALYLKTKGD 937 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET----TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETT
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC----CEEEEEECCCCceEEEEeeccccEEEEEEeccCC
Confidence 355688888876666666544433345567778898777767 78899998766422211000000001 1234567
Q ss_pred EEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEECCEEEEEecCCCCeE--EEEeCC
Q 045821 213 KIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVVDDALYVLDQSSGTKL--MMWQKE 278 (352)
Q Consensus 213 ~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v--~~yd~~ 278 (352)
.|++- -. .....+..|+...++-..+.....+.+..++..++..-++.+...+ ++ ..||++
T Consensus 938 ~I~vg-D~---~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~g-Nl~vl~~~~~ 1000 (1158)
T 3ei3_A 938 FILVG-DL---MRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAF-NLFVCQKDSA 1000 (1158)
T ss_dssp EEEEE-ES---SBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTS-EEEEEEECTT
T ss_pred EEEEE-Eh---hheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCC-cEEEEecCCC
Confidence 76654 22 1223677899999999888776666665555444333333333333 44 455654
No 327
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=50.75 E-value=1.2e+02 Score=26.21 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=36.2
Q ss_pred CCEEEEEecC--------CCCeEEEEeCCCCce-EEccCCCCCcCCCCceEEEeCC-EEEEEc-CCceEEEEEcCCcc
Q 045821 258 DDALYVLDQS--------SGTKLMMWQKESREW-SPVGRLSTLLTRPPCKLVAIGK-TIFVIG-KGCSAVVIDVGNIG 324 (352)
Q Consensus 258 ~~~l~~~gg~--------~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~~-~i~v~g-G~~~~~~~d~~~~~ 324 (352)
++++|+.... .++.|+++|..+.+- .+++ ++. .-...++..-+. .+|+.. +...+.+||+++..
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~--~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGH--DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCC--CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 4678886531 124899999987654 2332 211 111122222244 477766 46678899998755
No 328
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=50.14 E-value=1.3e+02 Score=26.17 Aligned_cols=111 Identities=14% Similarity=0.061 Sum_probs=61.1
Q ss_pred EEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEECCEEEEEeCC--CC---------CCCCCCeE
Q 045821 70 WIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVLGKNAYLLGGC--GW---------SEDATSEV 138 (352)
Q Consensus 70 ~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~--~~---------~~~~~~~~ 138 (352)
+||++.-........++.+|+ .+.....+......+..+.+-..+.-++.+|+-+.. .. .......+
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~--~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQE--EEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEET--TTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred EEEEEECCCCCCeEEEEEEEC--CCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 577774432344567888888 777666665544332334444555567888876531 11 01235678
Q ss_pred EEEECCCCeeEecCCCCCcceeeeeEEE--C-CEEEEEeCCCCCCceEEEeCCC
Q 045821 139 YCYDASMNTWTDAAPMSTARCYFPCGVL--N-QKIYCIGGLGDTHSWDVYDPRT 189 (352)
Q Consensus 139 ~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~-~~iyv~gG~~~~~~v~~yd~~t 189 (352)
++||+. +.+.+.. .........+ + ..+|+.-... ..+++|+...
T Consensus 206 yr~d~~--~~~~~~~---~l~~pNGia~spDg~~lYvadt~~--~~I~~~~~~~ 252 (355)
T 3sre_A 206 TYYSPN--DVRVVAE---GFDFANGINISPDGKYVYIAELLA--HKIHVYEKHA 252 (355)
T ss_dssp EEECTT--CCEEEEE---EESSEEEEEECTTSSEEEEEEGGG--TEEEEEEECT
T ss_pred EEEECC--eEEEeec---CCcccCcceECCCCCEEEEEeCCC--CeEEEEEECC
Confidence 899884 3333221 1111122222 3 4788876433 6788998764
No 329
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=49.29 E-value=1.7e+02 Score=27.50 Aligned_cols=185 Identities=9% Similarity=-0.040 Sum_probs=100.7
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEec
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLHT 196 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~ 196 (352)
++.||+..- ....++++++.......+...... ...++++ .++.||+.-... ..+++.+.....-+.+.
T Consensus 360 ~~~ly~sD~------~~~~I~r~~~~g~~~~~v~~~~~~-~p~GlAvD~~~~~lY~tD~~~--~~I~v~~~~G~~~~~l~ 430 (619)
T 3s94_A 360 EGYIYWTDD------EVRAIRRSFIDGSGSQFVVTAQIA-HPDGIAVDWVARNLYWTDTGT--DRIEVTRLNGTMRKILI 430 (619)
T ss_dssp TTEEEEEET------TTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEE
T ss_pred CCeEEEEeC------CCCeEEEEEcCCCccEEEEECCCC-CcCceEEecccCcEEEEeCCC--CcEEEEeCCCCeEEEEE
Confidence 688998852 346788899887655544321111 1123344 378999985433 67889988765444443
Q ss_pred CCCCcccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEE-ECCEEEEEecCCCCeE
Q 045821 197 EPNIFTEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVV-VDDALYVLDQSSGTKL 272 (352)
Q Consensus 197 ~~~~~~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~-~~~~l~~~gg~~~~~v 272 (352)
.- ....-...++. +|.||+.--.. ...|++.+.....=..+ ......+ .+.++- .+++||+.....+ .|
T Consensus 431 ~~-~l~~P~~iavdp~~G~ly~tD~g~----~~~I~r~~~dG~~~~~l~~~~l~~P-~GlalD~~~~~LY~aD~~~~-~I 503 (619)
T 3s94_A 431 SE-DLEEPRAIVLDPMVGYMYWTDWGE----IPKIERAALDGSDRVVLVNTSLGWP-NGLALDYDEGKIYWGDAKTD-KI 503 (619)
T ss_dssp CT-TCCSEEEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTT-EE
T ss_pred EC-CCCCeeeEEEEcCCCcEEEecCCC----CCEEEEEccCCCccEEEEeCCCCCC-eeeEEcccCCEEEEEECCCC-EE
Confidence 11 11111233443 58999984111 23677777643322222 1111100 111222 2689999976555 89
Q ss_pred EEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEcC-CceEEEEEcCC
Q 045821 273 MMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIGK-GCSAVVIDVGN 322 (352)
Q Consensus 273 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG-~~~~~~~d~~~ 322 (352)
+++|++...=+.+... ...+-+++++.++.||+.-- ...+...|..+
T Consensus 504 ~~~~~dG~~~~~~~~~---~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~ 551 (619)
T 3s94_A 504 EVMNTDGTGRRVLVED---KIPHIFGFTLLGDYVYWTDWQRRSIERVHKRS 551 (619)
T ss_dssp EEEESSSCCCEEEEEC---CCCSSCCEEEETTEEEEECTTSSCEEEEESSS
T ss_pred EEEecCCCceEEEecc---CCCCcEEEEEECCEEEEeecCCCeEEEEEcCC
Confidence 9999876544333211 12234578888999998853 33344455443
No 330
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=47.60 E-value=66 Score=28.67 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=33.3
Q ss_pred CEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEE--EECCEEEEEecCCCCeEEEEeCCCC
Q 045821 212 GKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAV--VVDDALYVLDQSSGTKLMMWQKESR 280 (352)
Q Consensus 212 g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~--~~~~~l~~~gg~~~~~v~~yd~~~~ 280 (352)
+.+++.|+.++ .+..||..+..-.... ..+......+ .-+++.++.|+.++ .+.+||+...
T Consensus 162 ~~~las~s~Dg-----~v~iwD~~~~~~~~~~--~~~~~~v~~v~wspdg~~lasgs~dg-~v~iwd~~~~ 224 (434)
T 2oit_A 162 PSMVAVCLADG-----SIAVLQVTETVKVCAT--LPSTVAVTSVCWSPKGKQLAVGKQNG-TVVQYLPTLQ 224 (434)
T ss_dssp TTEEEEEETTS-----CEEEEEESSSEEEEEE--ECGGGCEEEEEECTTSSCEEEEETTS-CEEEECTTCC
T ss_pred CCEEEEEECCC-----eEEEEEcCCCcceeec--cCCCCceeEEEEcCCCCEEEEEcCCC-cEEEEccCCc
Confidence 56777766553 4777787665221110 0100011112 22677777777666 8999999843
No 331
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=47.47 E-value=1.9e+02 Score=27.30 Aligned_cols=184 Identities=9% Similarity=-0.035 Sum_probs=97.2
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCe-eEecCCCCCcceeeeeEE--ECCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNT-WTDAAPMSTARCYFPCGV--LNQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~-W~~~~~~~~~r~~~~~~~--~~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
++.||+.- .....++++++.... +..+-.... .....+++ .+++||+..... ..+++++.....=+.+
T Consensus 51 ~~~ly~sD------~~~~~I~r~~~~g~~~~~~v~~~~~-~~P~GlAvD~~~~~ly~~d~~~--~~I~v~~~dG~~~~~l 121 (619)
T 3s94_A 51 HGLIYWSD------VSEEAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGEKLYWTDSET--NRIEVSNLDGSLRKVL 121 (619)
T ss_dssp TTEEEEEE------TTTTEEEEEEC-----CEEEECSSC-SCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEE
T ss_pred CCEEEEEE------CCCCeEEEEEccCCCceEEEEeCCC-CCcCeEEEEecCCEEEEEeCCC--CEEEEEECCCCCEEEE
Confidence 68899874 224568888887543 222221111 12233444 268999986433 7889999876543333
Q ss_pred cCCCCcccceeEEE--ECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCcEEEE---CCEEEEEecCCCC
Q 045821 196 TEPNIFTEIEDSFV--MDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGPAVVV---DDALYVLDQSSGT 270 (352)
Q Consensus 196 ~~~~~~~~~~~~~~--~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~~~gg~~~~ 270 (352)
.. .....-...++ .+|.||+..- +....|++.++....-..+... .......+.+ +++||+.....+
T Consensus 122 ~~-~~l~~P~~Iavdp~~g~ly~tD~----g~~~~I~r~~~dG~~~~~l~~~--~~~~P~Glald~~~~~LY~aD~~~~- 193 (619)
T 3s94_A 122 FW-QELDQPRAIALDPSSGFMYWTDW----GEVPKIERAGMDGSSRFIIINS--EIYWPNGLTLDYEEQKLYWADAKLN- 193 (619)
T ss_dssp EC-SSCSCCCCEEEETTTTEEEEEEC----SSSCEEEEEETTSCSCEEEECS--SCSSEEEEEEETTTTEEEEEETTTC-
T ss_pred Ee-CCCCCCceEEEecCCCeEEEecc----CCCCEEEEEECCCCceEEEEeC--CCCCCcEEEEEccCCEEEEEeCCCC-
Confidence 21 11111113444 3689999841 1123688888764433333211 0111122332 689999976654
Q ss_pred eEEEEeCCCCceEEccCCCCCcCCCCceEEEeCCEEEEEc-CCceEEEEEcCC
Q 045821 271 KLMMWQKESREWSPVGRLSTLLTRPPCKLVAIGKTIFVIG-KGCSAVVIDVGN 322 (352)
Q Consensus 271 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g-G~~~~~~~d~~~ 322 (352)
.|+++|++...=..+... ...+-++++..++.||+.- +...+..+|..+
T Consensus 194 ~I~~~~~dG~~~~~~~~~---~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 194 FIHKSNLDGTNRQAVVKG---SLPHPFALTLFEDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp CEEEESSSCCEEC------------CCCEEESSSEEEEECTTTCSEEEEESSS
T ss_pred eEEEecCCCCccEEEEeC---CCCCceEEEEeCCEEEEecCCCCEEEEEECCC
Confidence 899999986443333211 1233467778888999875 444566777644
No 332
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=47.02 E-value=2e+02 Score=27.51 Aligned_cols=54 Identities=4% Similarity=-0.046 Sum_probs=30.8
Q ss_pred EEEEEeCCC---C---ceeecCCCCC---CCCC--CcEEEECCEEEEEecCCC---CeEEEEeCCCCc
Q 045821 228 CALVYEPST---D---SWLHADANMA---SGWR--GPAVVVDDALYVLDQSSG---TKLMMWQKESRE 281 (352)
Q Consensus 228 ~i~~yd~~~---~---~W~~~~~~~~---~~~~--~~~~~~~~~l~~~gg~~~---~~v~~yd~~~~~ 281 (352)
.++.+|..+ + +...+..+.. .... ..+..-+++++++--... ..|+.+|..+++
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 688899988 7 6766643211 1111 112345888554432211 368899988776
No 333
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=46.62 E-value=1.5e+02 Score=27.14 Aligned_cols=106 Identities=8% Similarity=0.093 Sum_probs=57.8
Q ss_pred CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcc--cceeEEE--------ECC-EEEEEccCCCC-CCceEEEEEeCC
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFT--EIEDSFV--------MDG-KIYIRCSASAA-TSHVCALVYEPS 235 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~--~~~~~~~--------~~g-~iyv~GG~~~~-~~~~~i~~yd~~ 235 (352)
++||++-... ..+.+.|++++.-+.+....... .-...++ -++ .||+.--.... .....+..++..
T Consensus 152 ~~Lyv~~~~~--~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~ 229 (496)
T 3kya_A 152 DHLYICYDGH--KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRN 229 (496)
T ss_dssp EEEEEEEETE--EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECC
T ss_pred CEEEEEECCC--CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecC
Confidence 6799986532 56889999999888775432211 1122333 244 48887322111 112357777754
Q ss_pred C-Ccee------ecCCCCCCCCCCcEEEE-CCEEEEEecCCCCeEEEEeCC
Q 045821 236 T-DSWL------HADANMASGWRGPAVVV-DDALYVLDQSSGTKLMMWQKE 278 (352)
Q Consensus 236 ~-~~W~------~~~~~~~~~~~~~~~~~-~~~l~~~gg~~~~~v~~yd~~ 278 (352)
. ..|. .++. ...+ ++.++.- ++.||+..-..+ .|++||++
T Consensus 230 ~~G~~~~~~~~~~v~~-~~~p-~giavdp~~g~LYvtd~~~g-~V~r~d~~ 277 (496)
T 3kya_A 230 ADGTFDDRSDIQLIAA-YKQC-NGATIHPINGELYFNSYEKG-QVFRLDLV 277 (496)
T ss_dssp TTSCCSTTSCEEEEEE-ESCC-CCEEECTTTCCEEEEETTTT-EEEEECHH
T ss_pred CCCceeecccceeecc-CCCc-eEEEEcCCCCeEEEEECCCC-EEEEEecc
Confidence 4 3553 2221 1111 1112222 567888775544 89999997
No 334
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=45.06 E-value=2.8e+02 Score=28.58 Aligned_cols=114 Identities=12% Similarity=0.105 Sum_probs=63.3
Q ss_pred CceEEEeCCCCcEEEecCCCCcccceeEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCCCc-EE-EE
Q 045821 180 HSWDVYDPRTNNWKLHTEPNIFTEIEDSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHADANMASGWRGP-AV-VV 257 (352)
Q Consensus 180 ~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~-~~ 257 (352)
..+.+|+....+.+.+..-.....-.+.+.++|+|.+.-|. .+..|+...++--...... ...... .. ..
T Consensus 864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~-------~l~vy~l~~~~~L~~~~~~-~~~i~~~~l~~~ 935 (1158)
T 3ei3_A 864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINS-------TVRLYEWTTEKELRTECNH-YNNIMALYLKTK 935 (1158)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETT-------EEEEEEECTTSCEEEEEEE-CCCSCEEEEEEE
T ss_pred eEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCC-------EEEEEECCCCceEEEEeec-cccEEEEEEecc
Confidence 66788887766666654322222333567788876664332 4788887665422211100 000111 12 45
Q ss_pred CCEEEEEecCCCCeEEEEeCCCCceEEccCCCCCcCCCCceEEEeC
Q 045821 258 DDALYVLDQSSGTKLMMWQKESREWSPVGRLSTLLTRPPCKLVAIG 303 (352)
Q Consensus 258 ~~~l~~~gg~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 303 (352)
++.|++-.-..+-.+..|++..++...++.-.. .+...++..++
T Consensus 936 ~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~--~~~vta~~~ld 979 (1158)
T 3ei3_A 936 GDFILVGDLMRSVLLLAYKPMEGNFEEIARDFN--PNWMSAVEILD 979 (1158)
T ss_dssp TTEEEEEESSBCEEEEEEETTTTEEEEEEECCS--CBCEEEEEEEE
T ss_pred CCEEEEEEhhheEEEEEEEcCCCeEEEEEeecc--cccEEEEEEEc
Confidence 777665555554567889999999998875443 34444555443
No 335
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=44.24 E-value=2.3e+02 Score=27.44 Aligned_cols=159 Identities=9% Similarity=0.096 Sum_probs=80.6
Q ss_pred CCeeEecCCCCCcceeeeeEE--EC-CEEEEEeCCCCCCceEEEeCCCCcEEEec-CCCC--cccceeEEE---ECCEEE
Q 045821 145 MNTWTDAAPMSTARCYFPCGV--LN-QKIYCIGGLGDTHSWDVYDPRTNNWKLHT-EPNI--FTEIEDSFV---MDGKIY 215 (352)
Q Consensus 145 t~~W~~~~~~~~~r~~~~~~~--~~-~~iyv~gG~~~~~~v~~yd~~t~~W~~~~-~~~~--~~~~~~~~~---~~g~iy 215 (352)
-++|+.+..++..- ...+. .+ +.+|+... ..+++=.-.-.+|+.+. .+|. ..... ... -++.||
T Consensus 577 G~tW~~~~~l~~~~--~~i~~d~~~~~~~y~g~~----g~v~~S~DgG~tW~~~~~~lp~~~~~~~~-i~~~~~~~~~l~ 649 (763)
T 3a0f_A 577 GKTWTAPSGLSKQT--TGIAADRVQANTFYVYVE----GDFFVSTDGGKSYTKKGNGLPCCWTYTGT-PVTSNLRAGELW 649 (763)
T ss_dssp TSCCBCCBSCCCCC--SCEEECSSSTTCEEEEET----TEEEEESSTTSBCEEECBTSCCSSCCCEE-EEECSSSTTCEE
T ss_pred CCCCeecCCCCCCc--ceEEEeccCCCEEEEEcC----CCEEEEeCCCcCccccccCCCcccCcccc-EEECCCCCCcEE
Confidence 45798886555421 12222 12 45555421 33443333345899874 3431 11111 222 247888
Q ss_pred EEccCCCCCCceEEEEEeCCCCceeecCCCCCCCCC----CcEEE----ECCEEEEEe-----cCCCCeEEEEeCCCCce
Q 045821 216 IRCSASAATSHVCALVYEPSTDSWLHADANMASGWR----GPAVV----VDDALYVLD-----QSSGTKLMMWQKESREW 282 (352)
Q Consensus 216 v~GG~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~----~~~~~----~~~~l~~~g-----g~~~~~v~~yd~~~~~W 282 (352)
+.+... .+++-+-...+|+++...+ .... ...+. ..+.||++| +. ..|++-+-...+|
T Consensus 650 ~~~~~~------~l~~S~D~G~tW~~~~~~~-~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~~~~--~gl~~S~D~G~tW 720 (763)
T 3a0f_A 650 VSVKGV------GIYHSTDFGNTFTALAGSG-SSLNPAVFSIGAPQTPNATETLFLWGIPSASQP--EGLYMSTDNGGLW 720 (763)
T ss_dssp EEETTT------EEEEESSTTSBCEECTTBT-TTBEEEEEEEECCSSTTSSCEEEEEEECSTTSC--SEEEEESSTTSCC
T ss_pred EEcCCC------eEEEEcCCCCCceEccCCC-cccccceeEEeeecCCCCCceEEEEEEcccCCC--cEEEEeCCCCCCc
Confidence 875322 4666655667999996422 2211 00111 135789888 32 2688888788999
Q ss_pred EEccCCCCCcCCCCceEEEe---CCEEEEEcCCceEEEEEc
Q 045821 283 SPVGRLSTLLTRPPCKLVAI---GKTIFVIGKGCSAVVIDV 320 (352)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~---~~~i~v~gG~~~~~~~d~ 320 (352)
+++..-...+.... .+... .++||+......+++-|+
T Consensus 721 ~~~~~~~~~~~~~~-~i~~~p~~~~~v~~~T~GrGi~~g~~ 760 (763)
T 3a0f_A 721 TRLNDDAHNYGGAT-VISGDPRIYGRVYIGMNGRGIICAQA 760 (763)
T ss_dssp EECSCTTCCTBCEE-EEEECTTSTTEEEEEEBSSCEEEEES
T ss_pred EeccCccccCCCcc-eEEeCCCCCCEEEEeCCCCeEEEEec
Confidence 99973222111111 33332 356887654445555444
No 336
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=42.88 E-value=1.9e+02 Score=26.15 Aligned_cols=118 Identities=15% Similarity=0.164 Sum_probs=58.5
Q ss_pred CCCCCEEEEEEecC-----CCCceeEEEecCCCCCCCeeEe---ccCCCc--ccCCcceE---E------E--EECCEEE
Q 045821 65 NLDETWIYAFCRDN-----KLERVCCYVLDPNSTRRSWKMI---HELPAR--TLRRKGMG---F------E--VLGKNAY 123 (352)
Q Consensus 65 ~~~~~~l~~~gg~~-----~~~~~~~~~~d~~~~~~~w~~~---~~~~~~--~~~~~~~~---~------~--~~~~~iy 123 (352)
+..+..+|+..... ....+...-.|| ...++.++ .+||.. ...+.++. . . .-..++|
T Consensus 22 ~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp--~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~ 99 (462)
T 2ece_A 22 APPEDLAYVACLYTGTGINRADFIAVVDVNP--KSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLI 99 (462)
T ss_dssp SCCCSEEEEEEECTTTTCCCCCEEEEEECCT--TSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEE
T ss_pred CCcceEEEEEeeccCCCCCCCCeEEEEECCC--CCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEE
Confidence 45589999987652 122334454455 55555333 234421 01111110 0 1 2245677
Q ss_pred EEeCCCCCCCCCCeEEEEECCCC----eeEecCC---C--CCcc-eeeeeEEE-CCEEEEEe--CCCCC--CceEEEeCC
Q 045821 124 LLGGCGWSEDATSEVYCYDASMN----TWTDAAP---M--STAR-CYFPCGVL-NQKIYCIG--GLGDT--HSWDVYDPR 188 (352)
Q Consensus 124 v~GG~~~~~~~~~~~~~~d~~t~----~W~~~~~---~--~~~r-~~~~~~~~-~~~iyv~g--G~~~~--~~v~~yd~~ 188 (352)
+-|.. ++.++++|..++ +-...-. + +... ..|..... ++ |||.. +.... ..+.++|..
T Consensus 100 v~~l~------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 100 VPGLR------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp EEBTT------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred EccCC------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 66543 467999998766 3222110 1 1111 23444444 45 77742 21111 789999999
Q ss_pred CCc
Q 045821 189 TNN 191 (352)
Q Consensus 189 t~~ 191 (352)
|.+
T Consensus 173 T~~ 175 (462)
T 2ece_A 173 SFE 175 (462)
T ss_dssp TCC
T ss_pred CCe
Confidence 875
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=42.62 E-value=16 Score=31.79 Aligned_cols=26 Identities=0% Similarity=0.031 Sum_probs=17.9
Q ss_pred CCEEEEEecCCCCeEEEEeCCCCceE
Q 045821 258 DDALYVLDQSSGTKLMMWQKESREWS 283 (352)
Q Consensus 258 ~~~l~~~gg~~~~~v~~yd~~~~~W~ 283 (352)
++.+|++.......++.+|.+++.|.
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CCcEEEEEECCCCEEEEEECCCCcEE
Confidence 56777776432238999998887664
No 338
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=42.19 E-value=2.4e+02 Score=27.13 Aligned_cols=140 Identities=10% Similarity=-0.004 Sum_probs=69.2
Q ss_pred CeEEEEECCCCeeE--ecCCCCCcceeeeeEEE-CC-EEEEEeCCCCCCceEEEeCCCC--cE--EEecCCCCcccceeE
Q 045821 136 SEVYCYDASMNTWT--DAAPMSTARCYFPCGVL-NQ-KIYCIGGLGDTHSWDVYDPRTN--NW--KLHTEPNIFTEIEDS 207 (352)
Q Consensus 136 ~~~~~~d~~t~~W~--~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~--~W--~~~~~~~~~~~~~~~ 207 (352)
..++.++..+.+-. .+-..+..........- ++ .|++.......+.++++|..+. .+ +.+.+-...... ..
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~-s~ 325 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRY-DV 325 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCE-EE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceE-EE
Confidence 46788887765311 11111112222222222 44 4554443222378889998875 46 655422111111 11
Q ss_pred E-EECCEEEEEccCCCCCCceEEEEEeCCC-Cceee-cCCCCCCCCCCcEEEECCEEEEEecCCC-CeEEEEeC
Q 045821 208 F-VMDGKIYIRCSASAATSHVCALVYEPST-DSWLH-ADANMASGWRGPAVVVDDALYVLDQSSG-TKLMMWQK 277 (352)
Q Consensus 208 ~-~~~g~iyv~GG~~~~~~~~~i~~yd~~~-~~W~~-~~~~~~~~~~~~~~~~~~~l~~~gg~~~-~~v~~yd~ 277 (352)
. ..++.||+..-.. ......++.+|..+ ..|+. +-..............++.|++.....+ ..++++|+
T Consensus 326 ~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 326 QMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 1 2377888874332 12334788999876 67876 4221111011112234677777765444 47889996
No 339
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=42.17 E-value=2.2e+02 Score=26.68 Aligned_cols=144 Identities=10% Similarity=0.020 Sum_probs=71.2
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEec-CCCCcc-ccee-EEEECCEEEEEccCCCCCCceEEEEEeCCCCc-----
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHT-EPNIFT-EIED-SFVMDGKIYIRCSASAATSHVCALVYEPSTDS----- 238 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~-~~~~~~-~~~~-~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~----- 238 (352)
+|+..+.++.+ ..+.+||.++ .+..+. .++... ..++ +..-+|++.+.||.++ .+..||..++.
T Consensus 96 dG~~LAs~s~d--g~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DG-----tVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 96 IDDWMAVLSNN--GNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDG-----ELQFFSIRKNSENTPE 167 (588)
T ss_dssp SSSCEEEEETT--SCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTS-----EEEEEECCCCTTTCCC
T ss_pred CCCEEEEEeCC--CcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcccccc
Confidence 56666666655 5677787544 333332 111111 1222 2334788888876653 57888887763
Q ss_pred ---eeecCCCCCC--CCCCcEEEECCEEEEEecCCCCeEEEEeCCCCc----eEEccCCCCCcCCCCceEEEeCCEEEEE
Q 045821 239 ---WLHADANMAS--GWRGPAVVVDDALYVLDQSSGTKLMMWQKESRE----WSPVGRLSTLLTRPPCKLVAIGKTIFVI 309 (352)
Q Consensus 239 ---W~~~~~~~~~--~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~----W~~~~~~~~~~~~~~~~~~~~~~~i~v~ 309 (352)
...+...... .+-...+...+. ++.++.++ .+..||..++. |..+..... ..-.+++..++.|...
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~-tVrlWd~~~~~~~~~~~tL~~~h~---~~V~svaFsg~~LASa 242 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNN-SVFSMTVSASSHQPVSRMIQNASR---RKITDLKIVDYKVVLT 242 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTC-CEEEECCCSSSSCCCEEEEECCCS---SCCCCEEEETTEEEEE
T ss_pred ceeeeeeecccccccccEEEEEEcCCc-EEEEeCCC-eEEEEECCCCccccceeeeccccc---CcEEEEEEECCEEEEE
Confidence 2222111111 111112223344 55555544 89999988766 333421111 1112222225444444
Q ss_pred cCCceEEEEEcCCcc
Q 045821 310 GKGCSAVVIDVGNIG 324 (352)
Q Consensus 310 gG~~~~~~~d~~~~~ 324 (352)
+...+.++|++...
T Consensus 243 -~~~tIkLWd~~~~~ 256 (588)
T 2j04_A 243 -CPGYVHKIDLKNYS 256 (588)
T ss_dssp -CSSEEEEEETTTTE
T ss_pred -eCCeEEEEECCCCe
Confidence 44567788877644
No 340
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=40.76 E-value=2.4e+02 Score=26.56 Aligned_cols=200 Identities=9% Similarity=0.016 Sum_probs=101.1
Q ss_pred CcceEEEEE------CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE----CCEEEEEeCCCC-
Q 045821 110 RKGMGFEVL------GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL----NQKIYCIGGLGD- 178 (352)
Q Consensus 110 ~~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~----~~~iyv~gG~~~- 178 (352)
...|...+. +..+|+.. .....+.+.|+.+.+-..+-.+|.....|.++.. .+++|+.+....
T Consensus 86 d~hh~~~s~t~g~~DG~~lfVnd------~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p 159 (595)
T 1fwx_A 86 DLHHVHMSFTEGKYDGRFLFMND------KANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETP 159 (595)
T ss_dssp CBCCEEEEEETTEEEEEEEEEEE------TTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEE
T ss_pred CCCccccCCCCCCcCCCEEEEEc------CCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccc
Confidence 334455555 45688853 3456799999999875543355554455555542 467888764321
Q ss_pred -----------C---CceEEEeCCCCc--EEEecCCCCcccceeEEEECC-EEEEEccCCCCC-----------------
Q 045821 179 -----------T---HSWDVYDPRTNN--WKLHTEPNIFTEIEDSFVMDG-KIYIRCSASAAT----------------- 224 (352)
Q Consensus 179 -----------~---~~v~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~g-~iyv~GG~~~~~----------------- 224 (352)
. +.+-+.|..+.+ |+-.-. ..... ..+..+| .+|+. ..++..
T Consensus 160 ~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg--g~pd~-~~~spdGk~~~vt-~~~se~~~~i~~~~~~~~d~v~V 235 (595)
T 1fwx_A 160 LVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS--GNLDN-CDADYEGKWAFST-SYNSEKGMTLPEMTAAEMDHIVV 235 (595)
T ss_dssp SSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES--SCCCC-EEECSSSSEEEEE-ESCTTCCSSHHHHTCCSEEEEEE
T ss_pred cCCCCcccccccccCceEEEEECCCCeEEEEEEeC--CCccc-eEECCCCCEEEEE-ecCcccCcchhhccccccceEEE
Confidence 0 677888998864 543211 11111 1122232 34443 222110
Q ss_pred ----------------CceEEEEEeCCCCceee----cCCCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCc-e-
Q 045821 225 ----------------SHVCALVYEPSTDSWLH----ADANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESRE-W- 282 (352)
Q Consensus 225 ----------------~~~~i~~yd~~~~~W~~----~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~-W- 282 (352)
..+.+.+.|..+.+.+. ++. ...-++..+.-+|+..++.+...+.+.+||..+.. +
T Consensus 236 ~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~ 313 (595)
T 1fwx_A 236 FNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVF 313 (595)
T ss_dssp EEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHH
T ss_pred eeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccc
Confidence 01136667776632222 211 11223444555777555555555599999998642 1
Q ss_pred --------EEccCCCCCcCCCCceEEEeCCEEEEEcCCce-EEEEEcCC
Q 045821 283 --------SPVGRLSTLLTRPPCKLVAIGKTIFVIGKGCS-AVVIDVGN 322 (352)
Q Consensus 283 --------~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~-~~~~d~~~ 322 (352)
..+..++.. .+..+..+.-++.+|+.-.-++ +..+|+++
T Consensus 314 ~~~l~~~~~v~~~v~vG-~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 314 YENADPRSAVVAEPELG-LGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp HSCCCGGGGEEECCBCC-SCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ccccCcccceEEEcCCC-CCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 112222221 1112222333457887665444 44677765
No 341
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=40.42 E-value=2.7e+02 Score=27.12 Aligned_cols=195 Identities=15% Similarity=0.116 Sum_probs=95.1
Q ss_pred EEEecCCCCCCCeeEeccCCCcc--cCCcceEEEEE---CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCC-CC--
Q 045821 85 CYVLDPNSTRRSWKMIHELPART--LRRKGMGFEVL---GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPM-ST-- 156 (352)
Q Consensus 85 ~~~~d~~~~~~~w~~~~~~~~~~--~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~-~~-- 156 (352)
+++-+- ...+|+.+....... ....-..++.. .+.+|+..|.... .....+++=+=.-.+|+.+... +.
T Consensus 39 v~rS~D--gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~-~~~~~v~~S~DgG~TW~~~~~~~~~~~ 115 (789)
T 1sqj_A 39 AYRWDA--GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG-DEWAAFYVSEDRGQSFTIYESPFPMGA 115 (789)
T ss_dssp EEEEET--TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT-SSCCEEEEESSTTSEEEEEECSSCCCT
T ss_pred EEEecC--CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC-CcccEEEEECCCCCcceeccCCcccCc
Confidence 344444 678999876532110 01122333333 2468887653210 0013444433334579887531 11
Q ss_pred ---cc-eeeeeEEE---CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCC---cccceeEEEE----CCEEEEEccCCC
Q 045821 157 ---AR-CYFPCGVL---NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNI---FTEIEDSFVM----DGKIYIRCSASA 222 (352)
Q Consensus 157 ---~r-~~~~~~~~---~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~---~~~~~~~~~~----~g~iyv~GG~~~ 222 (352)
.| ....+++. .+.+|+.. .. ..+++=+-.-.+|+++..++. .........+ .+.||+.....
T Consensus 116 ~~~~~~~~~~iav~p~~~~~v~~g~-~~--~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~- 191 (789)
T 1sqj_A 116 NDMGRNNGERLAVNPFNSNEVWMGT-RT--EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP- 191 (789)
T ss_dssp TSTTTTSCCCEEEETTEEEEEEEEC-SS--SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-
T ss_pred cCCCccceeEEEEcCCCCCEEEEEe-cc--CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-
Confidence 12 12234443 24666643 11 334443334568999875431 1111222332 24778764221
Q ss_pred CCCceEEEEEeCCCCceeecCCCCCCC-------C----------CCcEEEE-CCEEEEEecC-------CCCeEEEEeC
Q 045821 223 ATSHVCALVYEPSTDSWLHADANMASG-------W----------RGPAVVV-DDALYVLDQS-------SGTKLMMWQK 277 (352)
Q Consensus 223 ~~~~~~i~~yd~~~~~W~~~~~~~~~~-------~----------~~~~~~~-~~~l~~~gg~-------~~~~v~~yd~ 277 (352)
..+++=.-.-.+|+.+...+... . +..++.. ++.||+..+. ....|++.+-
T Consensus 192 ----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~D 267 (789)
T 1sqj_A 192 ----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNR 267 (789)
T ss_dssp ----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEET
T ss_pred ----CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeC
Confidence 12444334466899886322211 0 1112222 7888887321 1237999999
Q ss_pred CCCceEEccCCCC
Q 045821 278 ESREWSPVGRLST 290 (352)
Q Consensus 278 ~~~~W~~~~~~~~ 290 (352)
...+|+.+...+.
T Consensus 268 gG~tW~~~~~~~~ 280 (789)
T 1sqj_A 268 TSGAWDDITPRVG 280 (789)
T ss_dssp TTCCEEECCCCTT
T ss_pred CCCceEECcCCCC
Confidence 9999999976543
No 342
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=37.55 E-value=2.5e+02 Score=26.45 Aligned_cols=69 Identities=4% Similarity=-0.144 Sum_probs=41.4
Q ss_pred CEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEE----ECCEEEEEccCCC------------CCCceEEEE
Q 045821 168 QKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFV----MDGKIYIRCSASA------------ATSHVCALV 231 (352)
Q Consensus 168 ~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~----~~g~iyv~GG~~~------------~~~~~~i~~ 231 (352)
..+||....+ ..+.+.|+.+.+-.++-..|.....++.+. -.+++|+.+.... ......+.+
T Consensus 102 ~~lfVnd~~~--~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 102 RFLFMNDKAN--TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEETTT--TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CEEEEEcCCC--CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 4677754432 779999999988666545555454555443 2467777742211 112236778
Q ss_pred EeCCCCc
Q 045821 232 YEPSTDS 238 (352)
Q Consensus 232 yd~~~~~ 238 (352)
.|..+.+
T Consensus 180 ID~~t~~ 186 (595)
T 1fwx_A 180 VDADKWE 186 (595)
T ss_dssp EETTTTE
T ss_pred EECCCCe
Confidence 8888754
No 343
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=37.55 E-value=22 Score=20.45 Aligned_cols=21 Identities=29% Similarity=0.309 Sum_probs=15.9
Q ss_pred CCccCCCcHHHHHHhhccCcc
Q 045821 15 VPLISGLPDDIALFCLARVPR 35 (352)
Q Consensus 15 ~~~~~~lp~dl~~~il~r~p~ 35 (352)
.+-+..||.|+-+++|+--..
T Consensus 18 ~eVF~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 18 QEVFKQLPADIQEEILSGKSR 38 (48)
T ss_dssp GGGTTTSCHHHHHHHTTCCCS
T ss_pred HHHHHHCcHHHHHHHHhcchH
Confidence 445678999999999985443
No 344
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=37.44 E-value=2e+02 Score=24.76 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=33.5
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeE-ecCCCCCcceeeeeEEE-CC-EEEEEeCCCCCCceEEEeCCCCc
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWT-DAAPMSTARCYFPCGVL-NQ-KIYCIGGLGDTHSWDVYDPRTNN 191 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~-~~~~~~~~r~~~~~~~~-~~-~iyv~gG~~~~~~v~~yd~~t~~ 191 (352)
++.+++-||. ...+.++|..++.-. .+.....+ -.+++.. ++ .+++.|+.+ ..+.+||..+.+
T Consensus 155 d~~~las~s~------D~tv~~Wd~~~~~~~~~~~~~~~~--v~~v~~~p~~~~~l~~~~~d--~~v~~wd~~t~~ 220 (393)
T 4gq1_A 155 AEQVIASVGD------DCTLIIWRLTDEGPILAGYPLSSP--GISVQFRPSNPNQLIVGERN--GNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEEET------TSEEEEEEEETTEEEEEEEECSSC--EEEEEEETTEEEEEEEEETT--SEEEEEETTCCC
T ss_pred CCCEEEEEEC------CCeEEEEECCCCceeeeecCCCCC--cEEEEECCCCCceEEecCCC--CEEEEEECCCCc
Confidence 4567777764 345778887665421 11111111 1122222 33 456666555 678889988764
No 345
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=37.12 E-value=2.1e+02 Score=24.89 Aligned_cols=146 Identities=7% Similarity=-0.059 Sum_probs=70.5
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCee-EecCCCCC-ccee-eeeEEECCEEEEEeCCC----------CCCceEEEe
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTW-TDAAPMST-ARCY-FPCGVLNQKIYCIGGLG----------DTHSWDVYD 186 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W-~~~~~~~~-~r~~-~~~~~~~~~iyv~gG~~----------~~~~v~~yd 186 (352)
+.+++-|+. .+.+.++|+.+++- ..+..-.. ...- +.+..-++++.+.+... .+..+..+|
T Consensus 193 ~~~LaSgS~------D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 193 QEALLGTTI------MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp TTEEEEEET------TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred CceEEEecC------CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 355555543 45788999999874 33321111 1111 11222367766543321 116677788
Q ss_pred CCCCcEEEec--CCCCcccce-eEEEECCEEEEEccCCCCCCceEEEEEeCCCCceeec-CCCCCCCCCCcEEEECCEEE
Q 045821 187 PRTNNWKLHT--EPNIFTEIE-DSFVMDGKIYIRCSASAATSHVCALVYEPSTDSWLHA-DANMASGWRGPAVVVDDALY 262 (352)
Q Consensus 187 ~~t~~W~~~~--~~~~~~~~~-~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~ 262 (352)
+.+..-..+- ..|..+... .....++.+.+.|+.++ .|..+|..+++-... ...........+..-+++.+
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~Dg-----TIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSG-----TIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTS-----CEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCC-----cEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 8877543221 112222111 11122244555544442 577889888875433 21111111111233477777
Q ss_pred EEecCCCCeEEEEeC
Q 045821 263 VLDQSSGTKLMMWQK 277 (352)
Q Consensus 263 ~~gg~~~~~v~~yd~ 277 (352)
+.|+.++ .|.+||.
T Consensus 342 aSGS~D~-TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDG-NIFVYHY 355 (356)
T ss_dssp EEECTTS-CEEEEEE
T ss_pred EEEECCC-cEEEecC
Confidence 7777665 7888874
No 346
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=36.25 E-value=49 Score=28.59 Aligned_cols=109 Identities=14% Similarity=0.153 Sum_probs=52.7
Q ss_pred EEEEEccCCCCCCceEEEEEeCCCCceee-cCCCCCCCCCCcEEEE-CCEEEEEecC--------CCCeEEEEeCCCCce
Q 045821 213 KIYIRCSASAATSHVCALVYEPSTDSWLH-ADANMASGWRGPAVVV-DDALYVLDQS--------SGTKLMMWQKESREW 282 (352)
Q Consensus 213 ~iyv~GG~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~-~~~l~~~gg~--------~~~~v~~yd~~~~~W 282 (352)
.+|+.-..........++.||..+.+-.. ++.. ...+.++.- +..+|+.... ....+.+||+.+.+-
T Consensus 17 ~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g---~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~ 93 (361)
T 2oiz_A 17 RIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA---FNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF 93 (361)
T ss_dssp EEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC---EEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE
T ss_pred EEEEECCCCCccccCeEEEEECCCCeEEEEecCC---CCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE
Confidence 56776322111112368888887775432 2211 111112222 4467776521 113699999886543
Q ss_pred -EEccCCCCCc--CCCCceEEE--eCCEEEEEcC--CceEEEEEcCCcc
Q 045821 283 -SPVGRLSTLL--TRPPCKLVA--IGKTIFVIGK--GCSAVVIDVGNIG 324 (352)
Q Consensus 283 -~~~~~~~~~~--~~~~~~~~~--~~~~i~v~gG--~~~~~~~d~~~~~ 324 (352)
.++...+... ...-..++. -+..+|+... ...+.+||+++..
T Consensus 94 ~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 94 EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE
T ss_pred EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc
Confidence 2333221100 011122322 3557888753 4567789988654
No 347
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=35.38 E-value=2.7e+02 Score=26.26 Aligned_cols=148 Identities=7% Similarity=-0.122 Sum_probs=68.8
Q ss_pred CCeEEEEE----CCCCeeEecCC----CCCccee---e-eeEEE-CC-EEEEE-eCCCCCCceEEEeCCCCcEEEecCCC
Q 045821 135 TSEVYCYD----ASMNTWTDAAP----MSTARCY---F-PCGVL-NQ-KIYCI-GGLGDTHSWDVYDPRTNNWKLHTEPN 199 (352)
Q Consensus 135 ~~~~~~~d----~~t~~W~~~~~----~~~~r~~---~-~~~~~-~~-~iyv~-gG~~~~~~v~~yd~~t~~W~~~~~~~ 199 (352)
...++.+| ..++++..+.. ....... + ..+.. ++ .+++. ...+....++.+|..+...+.+....
T Consensus 277 ~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~ 356 (719)
T 1z68_A 277 VSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGK 356 (719)
T ss_dssp EEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSS
T ss_pred eEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCc
Confidence 35788999 77777655441 1111111 0 22222 44 34443 33332367899999888776665321
Q ss_pred CcccceeEEEECCEEEEEccCC-CCCCceEEEEEeCCCC--ceeecCCCCC-CCCCCcEE--EECCE-EEEEe-cCCCCe
Q 045821 200 IFTEIEDSFVMDGKIYIRCSAS-AATSHVCALVYEPSTD--SWLHADANMA-SGWRGPAV--VVDDA-LYVLD-QSSGTK 271 (352)
Q Consensus 200 ~~~~~~~~~~~~g~iyv~GG~~-~~~~~~~i~~yd~~~~--~W~~~~~~~~-~~~~~~~~--~~~~~-l~~~g-g~~~~~ 271 (352)
... ......-++.||..+... .......++..+..++ +.+.+..... .......+ ..+++ +++.. +.....
T Consensus 357 ~~v-~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~ 435 (719)
T 1z68_A 357 WEA-INIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPI 435 (719)
T ss_dssp SCE-EEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCE
T ss_pred eEE-EEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCe
Confidence 111 111223344566653220 1123346777777544 3455543211 11111122 22344 33332 222236
Q ss_pred EEEEeCCCCceE
Q 045821 272 LMMWQKESREWS 283 (352)
Q Consensus 272 v~~yd~~~~~W~ 283 (352)
+++||..+++..
T Consensus 436 ~~l~d~~~g~~~ 447 (719)
T 1z68_A 436 STLHDGRTDQEI 447 (719)
T ss_dssp EEEECSSSCCEE
T ss_pred EEEEECCCCCEE
Confidence 788888776643
No 348
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=35.04 E-value=1.5e+02 Score=25.53 Aligned_cols=104 Identities=4% Similarity=0.032 Sum_probs=50.8
Q ss_pred EEEEEeCCCCCCceEEEeCCCCcEEE---ecCCCCcccceeEEE----------ECCEEEEEccCCCCCCceEEEEEeCC
Q 045821 169 KIYCIGGLGDTHSWDVYDPRTNNWKL---HTEPNIFTEIEDSFV----------MDGKIYIRCSASAATSHVCALVYEPS 235 (352)
Q Consensus 169 ~iyv~gG~~~~~~v~~yd~~t~~W~~---~~~~~~~~~~~~~~~----------~~g~iyv~GG~~~~~~~~~i~~yd~~ 235 (352)
.+.+.|+.+ ..+..+|..+.+-.. +..+......-..+. .++++.+.||.+. .+..+|..
T Consensus 102 ~~las~~~d--~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~-----tv~~Wd~~ 174 (393)
T 4gq1_A 102 LFLACVCQD--NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC-----TLIIWRLT 174 (393)
T ss_dssp EEEEEEETT--SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS-----EEEEEEEE
T ss_pred CEEEEEeCC--CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC-----eEEEEECC
Confidence 344445444 677788877764332 222221111111222 2678888877653 46666664
Q ss_pred CCceeecCCCCCCCCCCcEEEE--CC-EEEEEecCCCCeEEEEeCCCCce
Q 045821 236 TDSWLHADANMASGWRGPAVVV--DD-ALYVLDQSSGTKLMMWQKESREW 282 (352)
Q Consensus 236 ~~~W~~~~~~~~~~~~~~~~~~--~~-~l~~~gg~~~~~v~~yd~~~~~W 282 (352)
+..=.... .........+.+ ++ .+++.|+.++ .+.+||..+++-
T Consensus 175 ~~~~~~~~--~~~~~~v~~v~~~p~~~~~l~~~~~d~-~v~~wd~~t~~~ 221 (393)
T 4gq1_A 175 DEGPILAG--YPLSSPGISVQFRPSNPNQLIVGERNG-NIRIFDWTLNLS 221 (393)
T ss_dssp TTEEEEEE--EECSSCEEEEEEETTEEEEEEEEETTS-EEEEEETTCCC-
T ss_pred CCceeeee--cCCCCCcEEEEECCCCCceEEecCCCC-EEEEEECCCCcc
Confidence 43211110 011111112222 44 4666666665 899999887653
No 349
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=34.29 E-value=2.4e+02 Score=24.83 Aligned_cols=66 Identities=9% Similarity=0.016 Sum_probs=34.9
Q ss_pred CEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCCCcceeeeeEEE--CCEEEEEeCCCCCCceEEEeCCCCcEEEe
Q 045821 120 KNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMSTARCYFPCGVL--NQKIYCIGGLGDTHSWDVYDPRTNNWKLH 195 (352)
Q Consensus 120 ~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~gG~~~~~~v~~yd~~t~~W~~~ 195 (352)
+.+++.|+.+ ..+.+||..+++-.. .... .......+.+ +++.++.|+.+ ..+.+||+....-..+
T Consensus 162 ~~~las~s~D------g~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~d--g~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 162 PSMVAVCLAD------GSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQN--GTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TTEEEEEETT------SCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETT--SCEEEECTTCCEEEEE
T ss_pred CCEEEEEECC------CeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCC--CcEEEEccCCcccccc
Confidence 4566666543 457888988763211 1111 1111122222 56666667655 6789999983333333
No 350
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=30.91 E-value=2.2e+02 Score=23.27 Aligned_cols=149 Identities=7% Similarity=0.044 Sum_probs=76.5
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCc--ee--e
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDS--WL--H 241 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~--~ 241 (352)
++.+|++.... ..++.+|+....++.++ +.......+.+.. ++.+++.-... ..+..|+...+. |. .
T Consensus 38 ~~~L~aV~d~~--~~I~~ld~~g~v~~~i~-l~g~~D~EGIa~~~~g~~~vs~E~~-----~~l~~~~v~~~~~i~~~~~ 109 (255)
T 3qqz_A 38 SNTLFSTINKP--AAIVEMTTNGDLIRTIP-LDFVKDLETIEYIGDNQFVISDERD-----YAIYVISLTPNSEVKILKK 109 (255)
T ss_dssp TTEEEEEEETT--EEEEEEETTCCEEEEEE-CSSCSSEEEEEECSTTEEEEEETTT-----TEEEEEEECTTCCEEEEEE
T ss_pred CCEEEEEECCC--CeEEEEeCCCCEEEEEe-cCCCCChHHeEEeCCCEEEEEECCC-----CcEEEEEcCCCCeeeeeee
Confidence 47899887653 77899999977788875 2223344444444 45555552111 246666554333 42 2
Q ss_pred cCCCC---CCCCCCcEEEE---CCEEEEEecCCCCeEEEEe--CCCCceEEccC--CC-CCcCCCCceEEE--eCCEEEE
Q 045821 242 ADANM---ASGWRGPAVVV---DDALYVLDQSSGTKLMMWQ--KESREWSPVGR--LS-TLLTRPPCKLVA--IGKTIFV 308 (352)
Q Consensus 242 ~~~~~---~~~~~~~~~~~---~~~l~~~gg~~~~~v~~yd--~~~~~W~~~~~--~~-~~~~~~~~~~~~--~~~~i~v 308 (352)
..-+. +.....-++.. ++.||+........++.|+ +.++.-+.+.. +. ....+..+++.. ..+++|+
T Consensus 110 ~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lli 189 (255)
T 3qqz_A 110 IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLV 189 (255)
T ss_dssp EECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEE
T ss_pred eccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEE
Confidence 21111 11111112322 5589988765544788887 22222222211 00 001223344443 3678999
Q ss_pred EcCCce-EEEEEcCCc
Q 045821 309 IGKGCS-AVVIDVGNI 323 (352)
Q Consensus 309 ~gG~~~-~~~~d~~~~ 323 (352)
+....+ ..++|.+..
T Consensus 190 LS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 190 LSHESRALQEVTLVGE 205 (255)
T ss_dssp EETTTTEEEEECTTCC
T ss_pred EECCCCeEEEEcCCCC
Confidence 986554 446887754
No 351
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=30.84 E-value=2.6e+02 Score=24.19 Aligned_cols=237 Identities=6% Similarity=-0.124 Sum_probs=109.0
Q ss_pred CCEEEEEEecCCCCceeEEEecCCCCCCCeeEeccCCCcccCCcceEEEEE-CCEEEEEeCCC---CCCCCCCeEEEEEC
Q 045821 68 ETWIYAFCRDNKLERVCCYVLDPNSTRRSWKMIHELPARTLRRKGMGFEVL-GKNAYLLGGCG---WSEDATSEVYCYDA 143 (352)
Q Consensus 68 ~~~l~~~gg~~~~~~~~~~~~d~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~---~~~~~~~~~~~~d~ 143 (352)
..++|+.-.....-.-.+.++|+ .+++- +...+. ....+..... +..+|+..... ......+.+.++|+
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~--~t~~v--~~~i~v---G~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~ 103 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCA--GCGVT--LGHSLG---AFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP 103 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEET--TTTEE--EEEEEE---CTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT
T ss_pred CCeEEEECCccCCccceEEEEEC--CCCeE--EEEEeC---CCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 46789885432111116677788 66543 333331 1112322222 55788885210 01123577999999
Q ss_pred CCCeeE-ecCCCC-Ccc-----eeeeeEEE-C-CEEEEEeCCCCCCceEE--EeCCCCcEEEecCCCCcccceeEEEECC
Q 045821 144 SMNTWT-DAAPMS-TAR-----CYFPCGVL-N-QKIYCIGGLGDTHSWDV--YDPRTNNWKLHTEPNIFTEIEDSFVMDG 212 (352)
Q Consensus 144 ~t~~W~-~~~~~~-~~r-----~~~~~~~~-~-~~iyv~gG~~~~~~v~~--yd~~t~~W~~~~~~~~~~~~~~~~~~~g 212 (352)
.+++-. .++ ++ .+| ..+..+.- + ..+||.-.... +.+.+ .|+.+ =+.++ .+. .. +....++
T Consensus 104 ~T~~vv~~I~-v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~-~~v~V~~iD~~t--v~~i~-v~~--~~-~~~p~g~ 175 (368)
T 1mda_H 104 VTFLPIADIE-LPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS-AAAGLSVPGASD--DQLTK-SAS--CF-HIHPGAA 175 (368)
T ss_dssp TTCCEEEEEE-ETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS-CEEEEEETTTEE--EEEEE-CSS--CC-CCEEEET
T ss_pred CCCCEEEEEE-CCCccccccCCCcceEEEcCCCCEEEEEccCCC-CeEEEEEEchhh--ceEEE-CCC--ce-EEccCCC
Confidence 998732 222 22 111 12233333 3 46888742211 56777 88887 34443 211 11 1223344
Q ss_pred EEEEEccCCCCCCceEEEEEeCCC-Cce-eecC----CCCCCCCCCcEEEECCEEEEEecCCCCeEEEEeCCCCceEEcc
Q 045821 213 KIYIRCSASAATSHVCALVYEPST-DSW-LHAD----ANMASGWRGPAVVVDDALYVLDQSSGTKLMMWQKESREWSPVG 286 (352)
Q Consensus 213 ~iyv~GG~~~~~~~~~i~~yd~~~-~~W-~~~~----~~~~~~~~~~~~~~~~~l~~~gg~~~~~v~~yd~~~~~W~~~~ 286 (352)
+.|+..... + .+..+|..+ +.| .++. ..............++.+|++.- + .++..|..+++=+.+.
T Consensus 176 ~~~~~~~~d--g---~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~--~-~V~viD~~~~~~~v~~ 247 (368)
T 1mda_H 176 ATHYLGSCP--A---SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA--S-SILQGDIPAAGATMKA 247 (368)
T ss_dssp TEEECCCCT--T---SCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS--S-CCEEEECCSSCCEEEC
T ss_pred eEEEEEcCC--C---CEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC--C-EEEEEECCCCcceEEE
Confidence 555542222 1 234456654 222 1111 00000000012223556666654 3 8999998764322222
Q ss_pred CCCC---------CcCC--CCceEEEeCCEEEEE-c---C-----CceEEEEEcCCccccc
Q 045821 287 RLST---------LLTR--PPCKLVAIGKTIFVI-G---K-----GCSAVVIDVGNIGNIG 327 (352)
Q Consensus 287 ~~~~---------~~~~--~~~~~~~~~~~i~v~-g---G-----~~~~~~~d~~~~~w~~ 327 (352)
..+. ..+. ...++..-++++|+. . | .....++|+++..-.+
T Consensus 248 ~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~ 308 (368)
T 1mda_H 248 AIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG 308 (368)
T ss_dssp CCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred EEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE
Confidence 1110 0011 112333346789985 3 3 3456699998876444
No 352
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=29.84 E-value=2.8e+02 Score=24.10 Aligned_cols=93 Identities=13% Similarity=0.187 Sum_probs=49.2
Q ss_pred CCeEEEE--ECCCCeeEecCCC--C--Cc-ceeeeeEEE----CCEEEEEeCCCCCCceEEEeC---CCCcE--EEecCC
Q 045821 135 TSEVYCY--DASMNTWTDAAPM--S--TA-RCYFPCGVL----NQKIYCIGGLGDTHSWDVYDP---RTNNW--KLHTEP 198 (352)
Q Consensus 135 ~~~~~~~--d~~t~~W~~~~~~--~--~~-r~~~~~~~~----~~~iyv~gG~~~~~~v~~yd~---~t~~W--~~~~~~ 198 (352)
.+.+.+| ||.++++..+... | .. +.-+.++.+ .+++|++-.... ..++.|+. ...+. +.+..+
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEe
Confidence 4566666 8889999988654 4 33 445555654 355555533222 45555555 23222 222222
Q ss_pred CCcccceeEEEE---CCEEEEEccCCCCCCceEEEEEeCC
Q 045821 199 NIFTEIEDSFVM---DGKIYIRCSASAATSHVCALVYEPS 235 (352)
Q Consensus 199 ~~~~~~~~~~~~---~g~iyv~GG~~~~~~~~~i~~yd~~ 235 (352)
.... ....|++ .++||+-- +...||+||..
T Consensus 177 ~lgs-q~EgcvvDd~~g~Lyv~e------Ed~GIw~~da~ 209 (355)
T 3amr_A 177 KMNS-QTEGMAADDEYGRLYIAE------EDEAIWKFSAE 209 (355)
T ss_dssp ECSS-CEEEEEEETTTTEEEEEE------TTTEEEEEECS
T ss_pred cCCC-CcceEEEcCCCCeEEEec------ccceEEEEeCC
Confidence 2222 2234444 47999962 22359999954
No 353
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=29.25 E-value=2.5e+02 Score=23.51 Aligned_cols=117 Identities=12% Similarity=0.008 Sum_probs=60.9
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEECCCCeeEecCCCC-Cc---c-eeeeeEEE-CCEEEEEeCCC---CCCceEEEeCCC
Q 045821 119 GKNAYLLGGCGWSEDATSEVYCYDASMNTWTDAAPMS-TA---R-CYFPCGVL-NQKIYCIGGLG---DTHSWDVYDPRT 189 (352)
Q Consensus 119 ~~~iyv~GG~~~~~~~~~~~~~~d~~t~~W~~~~~~~-~~---r-~~~~~~~~-~~~iyv~gG~~---~~~~v~~yd~~t 189 (352)
++++|+....... .. ..++.++ +++-...+... .+ . .-+.++.- ++++|++.... ....+.+||+.+
T Consensus 27 ~g~~~v~~~~~~~-~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t 102 (343)
T 2qe8_A 27 DGRLFLSLHQFYQ-PE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN 102 (343)
T ss_dssp TSCEEEEECGGGC-CS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT
T ss_pred CCCEEEEeCCCCC-Cc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC
Confidence 6788887532111 11 5677777 55544443211 11 1 22333333 48999986321 016799999998
Q ss_pred CcE-EEecCCCC----c-ccceeEEEE--CCEEEEEccCCCCCCceEEEEEeCCCCc-eeec
Q 045821 190 NNW-KLHTEPNI----F-TEIEDSFVM--DGKIYIRCSASAATSHVCALVYEPSTDS-WLHA 242 (352)
Q Consensus 190 ~~W-~~~~~~~~----~-~~~~~~~~~--~g~iyv~GG~~~~~~~~~i~~yd~~~~~-W~~~ 242 (352)
++- +.+. ++. . ......++- ++.+|+..... .....+.+||+.+++ |..+
T Consensus 103 g~~~~~~~-~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 103 NQLSRVIY-LPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TEEEEEEE-CCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred CeEEEEEE-CChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 873 3333 211 1 111333443 47899984210 123478899987554 5544
No 354
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=29.14 E-value=3.8e+02 Score=25.49 Aligned_cols=128 Identities=11% Similarity=0.185 Sum_probs=63.3
Q ss_pred CceEEEeCCC---C---cEEEecCCC----Ccccc-eeEEEECCEEEEEccCCCCCCceEEEEEeCCCCc--eeec--CC
Q 045821 180 HSWDVYDPRT---N---NWKLHTEPN----IFTEI-EDSFVMDGKIYIRCSASAATSHVCALVYEPSTDS--WLHA--DA 244 (352)
Q Consensus 180 ~~v~~yd~~t---~---~W~~~~~~~----~~~~~-~~~~~~~g~iyv~GG~~~~~~~~~i~~yd~~~~~--W~~~--~~ 244 (352)
..++++|..+ + +..++..+. ..... ..+..-+|+++++. .........++.+|..+++ |... ..
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~-~~r~~~~~~i~~~d~~tg~~~~~~~~~~~ 306 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW-LRRIQNYSVMDICDYDESSGRWNCLVARQ 306 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEE-EESSTTEEEEEEEEEETTTTEEEECGGGC
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEE-eCCCCCEEEEEEEECCCCccccceeEEEE
Confidence 3678899998 7 677765321 11111 12234588865552 2222233468888877765 3221 11
Q ss_pred C---CCCCC------CCcEEEECCE-EEEEec-CCC-CeEEEEeCCCCceEEccCCCCCcCCCCceEE-EeCCEEEEEcC
Q 045821 245 N---MASGW------RGPAVVVDDA-LYVLDQ-SSG-TKLMMWQKESREWSPVGRLSTLLTRPPCKLV-AIGKTIFVIGK 311 (352)
Q Consensus 245 ~---~~~~~------~~~~~~~~~~-l~~~gg-~~~-~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG 311 (352)
. ....+ ...+..-+|+ |+++.. ..+ ..|+.||..++.-.++..-... ..... .-++.||..+.
T Consensus 307 l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~----v~~~~~~d~~~i~f~~~ 382 (740)
T 4a5s_A 307 HIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWE----VIGIEALTSDYLYYISN 382 (740)
T ss_dssp EEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSC----EEEEEEECSSEEEEEES
T ss_pred eeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEE----EEEEEEEeCCEEEEEEe
Confidence 0 01111 1223344554 442432 223 5799999998776666532211 01111 22667777764
Q ss_pred C
Q 045821 312 G 312 (352)
Q Consensus 312 ~ 312 (352)
.
T Consensus 383 ~ 383 (740)
T 4a5s_A 383 E 383 (740)
T ss_dssp C
T ss_pred c
Confidence 4
No 355
>2l9b_B MRNA 3'-END-processing protein RNA14; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=22.52 E-value=49 Score=19.56 Aligned_cols=20 Identities=25% Similarity=0.371 Sum_probs=15.4
Q ss_pred CCcHHHHHHhhccCccccchh
Q 045821 20 GLPDDIALFCLARVPRRYHAV 40 (352)
Q Consensus 20 ~lp~dl~~~il~r~p~~~~~~ 40 (352)
.+|+|++ ++|+-+|.+.++.
T Consensus 6 ~iP~eI~-dLL~vLPKRQYFK 25 (53)
T 2l9b_B 6 ELPTEVL-DLLSVIPKRQYFN 25 (53)
T ss_dssp CCCHHHH-HHHHHSBCGGGGC
T ss_pred CCCHHHH-HHHHHcchHhhhc
Confidence 4888876 7888889887654
No 356
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=22.20 E-value=1.3e+02 Score=27.51 Aligned_cols=101 Identities=7% Similarity=-0.009 Sum_probs=51.1
Q ss_pred EEEEEeCCCCCCceEEEeCCCCcEEE-e-cCCCCcccceeEEEE-CCEEEEEccCCCCCCceEEEEEeCCCCce-eecCC
Q 045821 169 KIYCIGGLGDTHSWDVYDPRTNNWKL-H-TEPNIFTEIEDSFVM-DGKIYIRCSASAATSHVCALVYEPSTDSW-LHADA 244 (352)
Q Consensus 169 ~iyv~gG~~~~~~v~~yd~~t~~W~~-~-~~~~~~~~~~~~~~~-~g~iyv~GG~~~~~~~~~i~~yd~~~~~W-~~~~~ 244 (352)
.+++.|+.+ ..+.++|..+.+-.. + ....... ...++.. +++.++.|+... .+..+|..+..- ..+..
T Consensus 324 ~~laS~S~D--~tvklWD~~~~~~~~~~~~~~~~~~-v~~v~fsp~~~~l~s~~~d~-----tv~lwd~~~~~~~~~l~g 395 (524)
T 2j04_B 324 TVVSTVAVD--GYFYIFNPKDIATTKTTVSRFRGSN-LVPVVYCPQIYSYIYSDGAS-----SLRAVPSRAAFAVHPLVS 395 (524)
T ss_dssp CEEEEEETT--SEEEEECGGGHHHHCEEEEECSCCS-CCCEEEETTTTEEEEECSSS-----EEEEEETTCTTCCEEEEE
T ss_pred eEEEEeccC--CeEEEEECCCCCcccccccccccCc-ccceEeCCCcCeEEEeCCCC-----cEEEEECcccccceeeec
Confidence 677777766 678889987643110 0 0011000 1123333 466777755432 467777765432 11110
Q ss_pred CCCCCCCCcEE--EECCEEEEEecCCCCeEEEEeCCCCc
Q 045821 245 NMASGWRGPAV--VVDDALYVLDQSSGTKLMMWQKESRE 281 (352)
Q Consensus 245 ~~~~~~~~~~~--~~~~~l~~~gg~~~~~v~~yd~~~~~ 281 (352)
+...-.++ .-++++++.|+.++ .+.+||+....
T Consensus 396 ---H~~~V~sva~Sp~g~~l~Sgs~Dg-tv~lwd~~~~~ 430 (524)
T 2j04_B 396 ---RETTITAIGVSRLHPMVLAGSADG-SLIITNAARRL 430 (524)
T ss_dssp ---CSSCEEEEECCSSCCBCEEEETTT-EEECCBSCSST
T ss_pred ---CCCceEEEEeCCCCCeEEEEECCC-EEEEEechHhh
Confidence 00000112 23567777777666 88888876543
No 357
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=20.60 E-value=4e+02 Score=22.71 Aligned_cols=108 Identities=11% Similarity=0.044 Sum_probs=53.6
Q ss_pred CCEEEEEeCCCCCCceEEEeCCCCcEEEecCCCC---cccc-eeEEEE-----CCEEEEEccC-C-CCCCceEEEEEeCC
Q 045821 167 NQKIYCIGGLGDTHSWDVYDPRTNNWKLHTEPNI---FTEI-EDSFVM-----DGKIYIRCSA-S-AATSHVCALVYEPS 235 (352)
Q Consensus 167 ~~~iyv~gG~~~~~~v~~yd~~t~~W~~~~~~~~---~~~~-~~~~~~-----~g~iyv~GG~-~-~~~~~~~i~~yd~~ 235 (352)
++++||.--. ..+.++|. +.. +.+...+. .... ..++.. ++.||+.-.. . .......|.+|+..
T Consensus 39 dG~l~V~e~~---g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~ 113 (354)
T 3a9g_A 39 GGRYLVTERP---GRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLD 113 (354)
T ss_dssp TTEEEEEETT---TEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEEC
T ss_pred CCeEEEEeCC---CEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEEC
Confidence 6788886432 56777774 344 44433221 1112 233443 3699997421 1 10112468888876
Q ss_pred CC--c---eeec-CCCCCCCCC-Cc--EEEECCEEEEEecCCC------------CeEEEEeCCC
Q 045821 236 TD--S---WLHA-DANMASGWR-GP--AVVVDDALYVLDQSSG------------TKLMMWQKES 279 (352)
Q Consensus 236 ~~--~---W~~~-~~~~~~~~~-~~--~~~~~~~l~~~gg~~~------------~~v~~yd~~~ 279 (352)
.+ . .+.+ ...+....+ .. ++.-+|.||+.-|..+ ..|+++|++.
T Consensus 114 ~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 114 GSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp SSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred CCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 54 2 2222 111111112 12 2334789999865321 3788888865
No 358
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=20.06 E-value=4.8e+02 Score=23.41 Aligned_cols=119 Identities=9% Similarity=0.009 Sum_probs=69.0
Q ss_pred CCCcccCCcceEEEEECCEEEEEeCCCCCCCCCC-eEEEEE-----CCCCeeEecCCCC-CcceeeeeEEECCEEEEEeC
Q 045821 103 LPARTLRRKGMGFEVLGKNAYLLGGCGWSEDATS-EVYCYD-----ASMNTWTDAAPMS-TARCYFPCGVLNQKIYCIGG 175 (352)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~-~~~~~d-----~~t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~gG 175 (352)
++..++...-|+.+.+++.-|.+|=-++...+.. .+..|. |..-.-+.++.-- ..-+..++-.+++.+|+..-
T Consensus 277 L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTR 356 (670)
T 3ju4_A 277 LGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITR 356 (670)
T ss_dssp CCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEE
T ss_pred cccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEec
Confidence 3333355677888999888888874333212111 122221 1111223444322 22345667778999999864
Q ss_pred CCCC----CceEEEeCCCCcEEEecCCCC-cccceeEEEECCEEEEEccCC
Q 045821 176 LGDT----HSWDVYDPRTNNWKLHTEPNI-FTEIEDSFVMDGKIYIRCSAS 221 (352)
Q Consensus 176 ~~~~----~~v~~yd~~t~~W~~~~~~~~-~~~~~~~~~~~g~iyv~GG~~ 221 (352)
.... +.+.+-+..-..|+.+.-+.. .+...-.+..++.||++|...
T Consensus 357 gt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 357 GTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp ESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECS
T ss_pred CcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccc
Confidence 3221 777888888888998863322 223334677899999997543
Done!