BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045826
(584 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SKT7|NDB4_ARATH NAD(P)H dehydrogenase B4, mitochondrial OS=Arabidopsis thaliana
GN=NDB4 PE=1 SV=1
Length = 582
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/590 (69%), Positives = 480/590 (81%), Gaps = 14/590 (2%)
Query: 1 MRGYTFYEGAIRAFQDRSLLSKILVIGTVSGGSAV-AFSDSRPFQRIYG-----DSGEGE 54
M ++FY+ A F+ SKIL++ T SGG V +SDS P +RI DS
Sbjct: 1 MSFHSFYQRASSLFKAYPSTSKILLLSTFSGGGGVLVYSDSNPLKRILHADATLDSDGNP 60
Query: 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEP 114
+KKKVVVLG+GW+G +FL L + +++VQVVSPRN+F FTPLLPSVTNGTVEARSIVEP
Sbjct: 61 IRKKKVVVLGSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEP 120
Query: 115 IRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQA 174
IR ++RKKG ++KEAEC KIDA K+I+CR+ E + G EF +DYDIL++A+GA+
Sbjct: 121 IRGLMRKKGF--EYKEAECVKIDASNKKIHCRSKEGSSLKGTTEFDMDYDILILAVGAKP 178
Query: 175 NTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTG 234
NTFNTPGV EHA+FLKE E A IR SVIDCFERASLPNL++EERKKILHFVVVGGGPTG
Sbjct: 179 NTFNTPGVEEHAYFLKEAEDALNIRHSVIDCFERASLPNLTEEERKKILHFVVVGGGPTG 238
Query: 235 VEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDL 294
VEF+A LHDF++ D++K+YP ++EFT+ITLLEAGDHILNMFDKRITA AEEKF+RDGIDL
Sbjct: 239 VEFSAELHDFLVQDVAKIYPKVQEFTKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDL 298
Query: 295 KTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLA 354
KTGSMVV ++ EISTK+R TG+I S PYGMVVWSTGIG+RPVI DFM+QIGQ RRVLA
Sbjct: 299 KTGSMVVGVTADEISTKERETGKIVSEPYGMVVWSTGIGSRPVIKDFMQQIGQGQRRVLA 358
Query: 355 TDEWLRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICE 414
TDEWLRVEGC+ VYALGD ATINQR+VMEDI+AIF+KADK NTG L KD VVKDIC+
Sbjct: 359 TDEWLRVEGCDGVYALGDTATINQRRVMEDIAAIFNKADKGNTGTLKKKDFNSVVKDICQ 418
Query: 415 RYPQVEIYLNKKQLKNINVLLKNAEEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQV 474
RYPQVE+YL K +LKNI LLK+A + + +IEKFK+ALSEVDSQMK+LPATAQV
Sbjct: 419 RYPQVELYLKKNKLKNIANLLKSANGE----DTQVNIEKFKQALSEVDSQMKNLPATAQV 474
Query: 475 AAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLE 534
A+Q+G YLA CFN+ME+CEK PEGPLRFRG GRHRF PFRY+HFG FAPLGGE+ AA E
Sbjct: 475 ASQQGKYLAKCFNKMEKCEKKPEGPLRFRGEGRHRFQPFRYRHFGSFAPLGGEQTAA--E 532
Query: 535 LPFDWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI 584
LP DW+S+G SQWLWYSVYASK +SWRTR LVISDW RRF+FGRDSS I
Sbjct: 533 LPGDWVSIGHSSQWLWYSVYASKLVSWRTRMLVISDWTRRFVFGRDSSSI 582
>sp|F4JJJ3|NDB3_ARATH NAD(P)H dehydrogenase B3, mitochondrial OS=Arabidopsis thaliana
GN=NDB3 PE=2 SV=1
Length = 580
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/586 (67%), Positives = 476/586 (81%), Gaps = 8/586 (1%)
Query: 1 MRGYTFYEGAIRAFQDRSLLSKILVIGTVSGGSAVAFSDSRPFQRIYGDSG-EGEFKKKK 59
MR + ++E +AF D LSKILV+ T+SGG + +S++ P Y ++G E + +K+K
Sbjct: 1 MRPFAYFERLSQAFHDYPSLSKILVVSTISGGGLIVYSEANPS---YSNNGVETKTRKRK 57
Query: 60 VVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIV 119
VV+LGTGWAG +FLK L ++S+EVQV+SPRNYFAFTPLLPSVT GTVEARS+VEPIRNI
Sbjct: 58 VVLLGTGWAGASFLKTLNNSSYEVQVISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIA 117
Query: 120 RKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT 179
RK+ +++ F EAEC+KID K++YCR+ + GK+EF +DYD LVIA GAQ+NTFN
Sbjct: 118 RKQNVEMSFLEAECFKIDPGSKKVYCRSKQGVNSKGKKEFDVDYDYLVIATGAQSNTFNI 177
Query: 180 PGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAA 239
PGV E+ HFLKEVE AQRIR +VID FE+ASLP L+++ERK++LHFVVVGGGPTGVEFA+
Sbjct: 178 PGVEENCHFLKEVEDAQRIRSTVIDSFEKASLPGLNEQERKRMLHFVVVGGGPTGVEFAS 237
Query: 240 ALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSM 299
LHDFV +DL KLYP K +ITLLEA DHIL MFDKRIT AEEKF RDGID+K GSM
Sbjct: 238 ELHDFVNEDLVKLYPKAKNLVQITLLEAADHILTMFDKRITEFAEEKFTRDGIDVKLGSM 297
Query: 300 VVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWL 359
VVK++DKEIS K +A G++S+IPYGM+VWSTGIGTRPVI DFMKQIGQ NRR LATDEWL
Sbjct: 298 VVKVNDKEISAKTKA-GEVSTIPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRALATDEWL 356
Query: 360 RVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQV 419
RVEGC+++YALGDCATINQRKVMEDI+AIF KADK N+G L +K+ EV+ DIC+RYPQV
Sbjct: 357 RVEGCDNIYALGDCATINQRKVMEDIAAIFKKADKENSGTLTMKEFHEVMSDICDRYPQV 416
Query: 420 EIYLNKKQLKNINVLLKNAE-EDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQE 478
E+YL K + I LLK A+ E+ S+E DIE+ K AL +VDSQ+K LPAT QVAAQ+
Sbjct: 417 ELYLKSKGMHGITDLLKQAQAENGSNKSVELDIEELKSALCQVDSQVKLLPATGQVAAQQ 476
Query: 479 GAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLELPFD 538
G YLA CF+RME CEKNPEGP+R RG GRHRF PFRY+H GQFAPLGGE+ AAQ LP D
Sbjct: 477 GTYLAKCFDRMEVCEKNPEGPIRIRGEGRHRFRPFRYRHLGQFAPLGGEQTAAQ--LPGD 534
Query: 539 WISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI 584
W+S+G SQWLWYSVYASKQ+SWRTR LV+SDW RRF+FGRDSSRI
Sbjct: 535 WVSIGHSSQWLWYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSRI 580
>sp|Q94BV7|NDB2_ARATH NAD(P)H dehydrogenase B2, mitochondrial OS=Arabidopsis thaliana
GN=NDB2 PE=1 SV=1
Length = 582
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/589 (67%), Positives = 479/589 (81%), Gaps = 12/589 (2%)
Query: 1 MRGYTFYEGAIRAFQDRSLLSKILVIGTVSGGSAVAFSDSRPFQRIYGDSG----EGEFK 56
MR ++ +E +AF+D L++ILV+ T+SGG +A+S++ YG +G E K
Sbjct: 1 MRNFSVFERFSKAFKDHPSLTRILVVSTISGGGLIAYSEANA---SYGANGGAVVETGTK 57
Query: 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIR 116
KKKVV+LGTGWAGT+FLK L ++ +EVQ++SPRNYFAFTPLLPSVT GTVEARS+VEPIR
Sbjct: 58 KKKVVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPIR 117
Query: 117 NIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176
NI RK +D + EAEC+KID K++YCR+ + + GK+EF++DYD LVIA GAQ+NT
Sbjct: 118 NIGRKN-VDTSYLEAECFKIDPASKKVYCRSKQGLSSNGKKEFSVDYDYLVIATGAQSNT 176
Query: 177 FNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVE 236
FN PGV E+ HFLKEVE AQRIR++VID FE+ASLP LSDEERK+ILHFVVVGGGPTGVE
Sbjct: 177 FNIPGVEENCHFLKEVEDAQRIRKTVIDSFEKASLPELSDEERKRILHFVVVGGGPTGVE 236
Query: 237 FAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKT 296
FAA LHDFV +DL LYP K RITLLEA DHIL MFDKRIT AEEKF RDGID+K
Sbjct: 237 FAAELHDFVTEDLVSLYPRAKGSVRITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKL 296
Query: 297 GSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATD 356
GSMV K+++K+IS K + G++SSIPYGM+VWSTGIGTRPVI DFMKQIGQ NRR LATD
Sbjct: 297 GSMVTKVNEKDISAKTKG-GEVSSIPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRALATD 355
Query: 357 EWLRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERY 416
EWLRVEG +++YALGDCATINQRKVMED+SAIFSKADK+ +G L +K+ +E + DIC RY
Sbjct: 356 EWLRVEGTDNIYALGDCATINQRKVMEDVSAIFSKADKDKSGTLTLKEFQEAMDDICVRY 415
Query: 417 PQVEIYLNKKQLKNINVLLKNAE-EDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVA 475
PQVE+YL K+++ I LLK AE +D K ++E IE+FK ALS+VDSQ+K LPATAQVA
Sbjct: 416 PQVELYLKSKRMRGIADLLKEAETDDVSKNNIELKIEEFKSALSQVDSQVKFLPATAQVA 475
Query: 476 AQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLEL 535
AQ+GAYLA CF+RME+CEK+PEGP+R RG GRHRF PFRY+H GQFAPLGGE+ AAQ L
Sbjct: 476 AQQGAYLAKCFDRMEECEKSPEGPIRMRGEGRHRFRPFRYRHLGQFAPLGGEQTAAQ--L 533
Query: 536 PFDWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI 584
P DW+S+G SQWLWYSVYASKQ+SWRTR LV+SDW RRF+FGRDSS I
Sbjct: 534 PGDWVSIGHSSQWLWYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSSSI 582
>sp|Q1JPL4|NDB1_ARATH NAD(P)H dehydrogenase B1, mitochondrial OS=Arabidopsis thaliana
GN=NDB1 PE=1 SV=1
Length = 571
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/525 (63%), Positives = 432/525 (82%), Gaps = 5/525 (0%)
Query: 60 VVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIV 119
VVVLGTGWAG +FLK L S++VQVVSP+NYFAFTPLLPSVT GTVEARSIVE +RNI
Sbjct: 52 VVVLGTGWAGISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVESVRNIT 111
Query: 120 RKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT 179
+KK +I+ EA+C+KID ++++CR +EF+L YD L++A+GAQ NTF T
Sbjct: 112 KKKNGEIELWEADCFKIDHVNQKVHCRPVFKDDPEASQEFSLGYDYLIVAVGAQVNTFGT 171
Query: 180 PGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAA 239
PGV+E+ HFLKEVE AQRIRR VIDCFE+A LP L++E+R++ LHFV+VGGGPTGVEFAA
Sbjct: 172 PGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGVEFAA 231
Query: 240 ALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSM 299
LHDF+I+D++K+YPS+KE +ITL+++GDHILN FD+RI++ AE+KF RDGID++TG
Sbjct: 232 ELHDFIIEDITKIYPSVKELVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQTGMR 291
Query: 300 VVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWL 359
V+ ++DK+I+ K +++G++ SIP+G+++WSTG+GTRPVI DFM+Q+GQ RR +AT+EWL
Sbjct: 292 VMSVTDKDITVKVKSSGELVSIPHGLILWSTGVGTRPVISDFMEQVGQGGRRAVATNEWL 351
Query: 360 RVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQV 419
+V GCE+VYA+GDCA+I QRK++ DI+ IF AD +N+G L +++L+ VV DI RYPQV
Sbjct: 352 QVTGCENVYAVGDCASIAQRKILGDIANIFKAADADNSGTLTMEELEGVVDDIIVRYPQV 411
Query: 420 EIYLNKKQLKNINVLLKNAEEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEG 479
E+YL K +++IN LL ++E + +K E DIE FK ALSE DSQMK LPATAQVAAQ+G
Sbjct: 412 ELYLKSKHMRHINDLLADSEGNARK---EVDIEAFKLALSEADSQMKTLPATAQVAAQQG 468
Query: 480 AYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLELPFDW 539
AYLA CFNRMEQC++ PEGP RFR G H+F PF+YKHFGQFAPLGG++AAA ELP DW
Sbjct: 469 AYLAKCFNRMEQCKELPEGPKRFRTGGHHQFRPFQYKHFGQFAPLGGDQAAA--ELPGDW 526
Query: 540 ISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI 584
+S G+ +QWLWYSVYASKQ+SWRTR LV+SDW RR++FGRDSSRI
Sbjct: 527 VSAGKSAQWLWYSVYASKQVSWRTRALVVSDWTRRYIFGRDSSRI 571
>sp|F2Z699|NDH2_YARLI External alternative NADH-ubiquinone oxidoreductase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NDH2
PE=1 SV=1
Length = 582
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 280/555 (50%), Gaps = 84/555 (15%)
Query: 45 RIY-----GDSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLP 99
RIY D + KK +VVLG+GW +FLK L ++++ V VVSPRNYF FTPLLP
Sbjct: 95 RIYVIRNPSDQLPADPSKKTLVVLGSGWGSVSFLKKLDTSNYNVIVVSPRNYFLFTPLLP 154
Query: 100 SVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEF 159
S GT+E RSI+EPIR I+R K + Q+ EA+ KID EK+ + R+ KEE
Sbjct: 155 SCPTGTIEHRSIMEPIRGIIRHKQAECQYLEADATKIDHEKRIVTIRSAVSE--NSKEEV 212
Query: 160 --ALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDE 217
+ +D LV+ +GA ++TF PGV E+A FLKE+ AQ+IRR+++DC E+A E
Sbjct: 213 IKEIPFDYLVVGVGAMSSTFGIPGVQENACFLKEIPDAQQIRRTLMDCIEKAQFEK-DPE 271
Query: 218 ERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDK 277
RK++LH VVVGGGPTGVEFAA L DF DDL K P +++ ++TL+EA ++L F K
Sbjct: 272 VRKRLLHTVVVGGGPTGVEFAAELQDFFEDDLRKWIPDIRDDFKVTLVEALPNVLPSFSK 331
Query: 278 RITASAEEKFKRDGIDLKTGSMVVKLSDKEI---STKDRATGQISSIPYGMVVWSTGIGT 334
++ E+ F + I + T +MV + + I TK T + +PYG +VW+TG
Sbjct: 332 KLIDYTEKTFSDEKISILTKTMVKSVDENVIRAEQTKGDGTKETLEMPYGTLVWATGNTV 391
Query: 335 RPVIMDFMKQIG--QANRRVLATDEWLRVEGCESVYALGDCATINQRKVMEDISAIFSKA 392
RPV+ + M +I + +RR L +E+L VEG E ++ALGDC+ + S S
Sbjct: 392 RPVVRELMSKIPAQKGSRRGLLVNEYLVVEGTEGIWALGDCSATKYAPTAQVASQEGSYL 451
Query: 393 DKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVLLKNAEEDPKKASMEFDIE 452
G +DL + ++ K++ FD +
Sbjct: 452 ANLLNGIAKTEDLNNEITNL-----------------------------EKQSEHTFDEQ 482
Query: 453 KFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHP 512
+ K ++++S+ + L + M E + +G L + G+ R
Sbjct: 483 ERKNIFAQLESKSRKLRRS---------------RAMLPFEYSHQGSLAYIGSDR----- 522
Query: 513 FRYKHFGQFAPLGGEEAAAQLELPF----DWISVGRGSQWLWYSVYASKQISWRTRFLVI 568
A A L F +W S G + + W S Y S S R + LV
Sbjct: 523 ----------------AVADLSFNFWGIMNWSSGGTMTYYFWRSAYVSMCFSMRNKILVC 566
Query: 569 SDWRRRFMFGRDSSR 583
DW + +FGRD SR
Sbjct: 567 IDWMKVRVFGRDISR 581
>sp|O43090|NDH2_SCHPO Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC947.15c PE=3 SV=1
Length = 551
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 289/591 (48%), Gaps = 92/591 (15%)
Query: 9 GAIRAFQDRSLLSKIL----VIGTVSGGSAVAFSDSRPFQRIYGDSGEGE--FKKKKVVV 62
G + +++S S+ L V ++S AVA S +R+ S +G+ KK +VV
Sbjct: 38 GNVPTPRNKSFFSRALEMAEVTSSLSMLGAVALFQS--LRRLNNSSPKGKSGVPKKNIVV 95
Query: 63 LGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKK 122
LG+GW +K L + + + +VSPR++F FTP+LPS T GT+ SI EPI + + K
Sbjct: 96 LGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSITEPIVALFKGK 155
Query: 123 GMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGV 182
+AEC ID K++ R T + G +E + YD LV A+GA TF GV
Sbjct: 156 IDPSNIHQAECTAIDTSAKKVTIRGTTEANEG--KEAVIPYDTLVFAIGAGNQTFGIQGV 213
Query: 183 VEHAHFLKEVEHAQRIRRSVIDCFERASL-PNLSDEERKKILHFVVVGGGPTGVEFAAAL 241
+H FLKE A+++ + + E+ +LS EER ++LH VVGGGPTG+EFAA +
Sbjct: 214 RDHGCFLKEAGDAKKVFNRIFEILEQVRFNKDLSPEERARLLHITVVGGGPTGMEFAAEM 273
Query: 242 HDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVV 301
DF+ +D+ ++P L++ +TL+EA +L MF K + E FK I + T ++V
Sbjct: 274 QDFIDNDVKDMFPELQKDIHVTLIEAAPGVLPMFTKSLITYTENLFKNLNIKIMTKTVVK 333
Query: 302 KLSDKEI---STKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQAN--RRVLATD 356
+++K + T + + IPYGM+VW+ GI RP+ M I + + R+ L D
Sbjct: 334 DVNEKNLIVQKTNPDGSKAMQEIPYGMLVWAAGITARPLTRTLMSSIPEQSGARKGLIVD 393
Query: 357 EWLRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERY 416
E+ RV+G +YA+GDCA S + + A N
Sbjct: 394 EFFRVKGVPEMYAVGDCA----------FSGLPATAQVAN-------------------- 423
Query: 417 PQVEIYLNKKQLKNINVLLKNAEEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAA 476
Q +L KN+NV + KK ++ I+ +K L E + A +QVA
Sbjct: 424 -QQGAWLA----KNLNV-------EGKKFALHERIQALEKQLGEKE-------APSQVAG 464
Query: 477 QEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLELP 536
+ ++EQ + PF+Y H G A +G E+A A L+LP
Sbjct: 465 LK--------QQVEQL----------------KLEPFKYHHQGALAYVGDEKAIADLKLP 500
Query: 537 FDWISV---GRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI 584
F + G W Y ++ IS R++F+V+ DW + +FGR +++
Sbjct: 501 FMKKMLPLQGIVGHTFWRLAYLNELISARSQFMVLIDWLKTRLFGRYDAKV 551
>sp|O14121|NDH1_SCHPO Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3A11.07 PE=3 SV=1
Length = 551
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 208/361 (57%), Gaps = 12/361 (3%)
Query: 17 RSLLSKILVIGTVSGGSAVAFSDSRPFQRIYGDSGEGEFKKKKVVVLGTGWAGTTFLKIL 76
R+ L + G + F P Q + S KK +VVLG GW T+ L+ +
Sbjct: 57 RTTLGLFATAVVLYGANVYRFRHPDPHQPLPDPS------KKTLVVLGAGWGATSILRTI 110
Query: 77 KSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136
++ F V VVSPRNYF FT LLPS G+V RSIV+PIR ++R K ++F EAEC +
Sbjct: 111 DTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSIVQPIRYMLRHKSCYVKFYEAECTDV 170
Query: 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQ 196
DA+KK I+ + T T G E + YD LV + GA+ TFN PG+ E+ FLKE+ AQ
Sbjct: 171 DADKKVIHIKKTT--TDGVDLEQEIKYDYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQ 228
Query: 197 RIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSL 256
+IR ++ C E+A +L E R++ +H VVVGGGPTG+EFA + DF+ DDL YP L
Sbjct: 229 KIRARILHCLEQAQFKDLPAETRRRYVHTVVVGGGPTGMEFAGEMADFIEDDLKSWYPEL 288
Query: 257 KEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDR--- 313
+ +TL+EA +L MF ++ + F I ++T + + K++ + I + +
Sbjct: 289 ADDFAVTLVEALPSVLPMFSAKLRDYTQSLFDSSHIKIRTNTALKKVTAENIHVEVKNPD 348
Query: 314 ATGQISSIPYGMVVWSTGIGTRPVIMDFMK-QIGQANRRVLATDEWLRVEGCESVYALGD 372
+ Q IPYG++VW+ G RP+ M+ Q NRR L DE+L+++G + ++ALGD
Sbjct: 349 GSKQEEVIPYGLLVWAGGNRARPLTKKLMEGSEEQNNRRGLVVDEYLKLKGYKDIFALGD 408
Query: 373 C 373
C
Sbjct: 409 C 409
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 29/178 (16%)
Query: 434 LLKNAEEDPKKASMEFD----IEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRM 489
L++ +EE + + D ++ +K + D TAQVA+Q+GAYL FN++
Sbjct: 376 LMEGSEEQNNRRGLVVDEYLKLKGYKDIFALGDCTHTAYAPTAQVASQQGAYLGQLFNKL 435
Query: 490 EQCEKNPEGPLRFRG--------------------AGRHRFHPFRYKHFGQFAPLGGEEA 529
N E P R A F PF+Y H G A +G E+A
Sbjct: 436 GSL--NFEKPSEDRHIALGDEMDSSTLISLANEKHASTKVFLPFKYSHQGSLAYVGHEKA 493
Query: 530 AAQLELPF---DWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI 584
A +E+P+ + G + + W SVY S+ S R R V DW R +FGRD S +
Sbjct: 494 IADIEVPWFGKQLHASGALAFYFWRSVYLSELYSLRNRTNVTLDWIRVKLFGRDISSL 551
>sp|P40215|NDH1_YEAST External NADH-ubiquinone oxidoreductase 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDE1 PE=1 SV=1
Length = 560
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 222/358 (62%), Gaps = 10/358 (2%)
Query: 22 KILVIGTVSGGSAVAFS---DSRPFQRI-YGDSGEGEFKKKKVVVLGTGWAGTTFLKILK 77
K L+ ++G + V++S ++ P ++ D+ K+K +V+LG+GW + LK L
Sbjct: 73 KALLYSALAGTAYVSYSLYREANPSTQVPQSDTFPNGSKRKTLVILGSGWGSVSLLKNLD 132
Query: 78 SNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKID 137
+ + V VVSPRNYF FTPLLPS GT+E +SIVEP+R I R+ ++ + EAE Y +D
Sbjct: 133 TTLYNVVVVSPRNYFLFTPLLPSTPVGTIELKSIVEPVRTIARRSHGEVHYYEAEAYDVD 192
Query: 138 AEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQR 197
E K I +++ + L YD LV+ +GAQ NTF TPGV E++ FLKE+ AQ
Sbjct: 193 PENKTIKVKSSAK---NNDYDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQE 249
Query: 198 IRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLK 257
IR ++ E+A+ + D ER ++L FVVVGGGPTGVEFAA L D+V DL K P L
Sbjct: 250 IRLKIMSSIEKAASLSPKDPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELS 309
Query: 258 EFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQ 317
+ ++TL+EA +ILNMFDK + A++ FK + IDL+ +MV K+ I+ K G
Sbjct: 310 KEIKVTLVEALPNILNMFDKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAK-TGDGD 368
Query: 318 ISSIPYGMVVWSTGIGTRPVIMDFMKQI-GQANRRVLATDEWLRVEGCE-SVYALGDC 373
I +IPYG++VW+TG R V + M ++ Q +RR L D L++ G + S++A+GDC
Sbjct: 369 IENIPYGVLVWATGNAPREVSKNLMTKLEEQDSRRGLLIDNKLQLLGAKGSIFAIGDC 426
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 471 TAQVAAQEGAYLANCFNRMEQCE---------KNPEGPLRFRGA---GRHRFHPFRYKHF 518
TAQVA QEG YLA F + + + K+ R + + + F+Y H
Sbjct: 435 TAQVAHQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLKNQIVKTQSQIEDFKYNHK 494
Query: 519 GQFAPLGGEEAAAQLEL-PFDWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMF 577
G A +G ++A A L + + G + W S Y + +S+R R LV DW + +
Sbjct: 495 GALAYIGSDKAIADLAVGEAKYRLAGSFTFLFWKSAYLAMCLSFRNRVLVAMDWAKVYFL 554
Query: 578 GRDSS 582
GRDSS
Sbjct: 555 GRDSS 559
>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
GN=DDB_G0270104 PE=3 SV=2
Length = 451
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 213/352 (60%), Gaps = 19/352 (5%)
Query: 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPI 115
+ +K+++LG GW +FLK L S +++ V+SPRN+F FTPLL S GT+E RSI EP+
Sbjct: 38 ENEKLIILGCGWGSYSFLKNLNSIKYDITVISPRNHFLFTPLLTSSAVGTLEFRSIAEPV 97
Query: 116 RNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQAN 175
R + + ++ +A I+ E + ++T ++ F + YD LVI +G++ N
Sbjct: 98 R--TTRDINEFKYIQASVTSINPENNSVLVKST----FHNEKPFEMKYDKLVIGVGSRNN 151
Query: 176 TFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGV 235
TF GV E+A+FLKE+ HA+ IR+ +I+CFERASLP++S EER+++L FV+VGGG TG+
Sbjct: 152 TFGIKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEERERLLSFVIVGGGATGI 211
Query: 236 EFAAALHDFVIDDLSKLYPSLK-EFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDL 294
EF + L+DF +DLS+L+P + +I LLEA IL+ FD+++ A F+ GID+
Sbjct: 212 EFTSELNDFFSEDLSRLFPFVPVNEVKIILLEASGKILSTFDQKLVKKALINFRNSGIDV 271
Query: 295 KTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLA 354
+T S V KE+ IPYG++VWSTGIG P++ + + +R +
Sbjct: 272 RTHSSV-----KEVLKDYVILDNGDRIPYGLLVWSTGIGQHPLVKNSSFEKDSHDR--II 324
Query: 355 TDEWLRVEGCESVYALGDCATINQRKV-----MEDISAIFSKADKNNTGKLN 401
D+ LRV+ +V++ GDCA + + + SA++ + NN KLN
Sbjct: 325 VDDHLRVKNYSNVFSFGDCANVENKNYPPTAQVASQSAVYLAKEFNNLEKLN 376
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 466 KHLPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLG 525
K+ P TAQVA+Q YLA FN +E+ NP PF +K G A G
Sbjct: 349 KNYPPTAQVASQSAVYLAKEFNNLEKLNPNPP-------------KPFAFKFLGLLAYTG 395
Query: 526 GEEAAAQLELPFDWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSS 582
+ Q + FD G W S Y ++ S R++ V DW R +FGRD S
Sbjct: 396 KKSGILQTDF-FDL--SGFIGFITWRSAYLTRLGSLRSKIQVPFDWMRTLIFGRDIS 449
>sp|Q07500|NDH2_YEAST External NADH-ubiquinone oxidoreductase 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDE2 PE=1 SV=1
Length = 545
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 152/366 (41%), Positives = 224/366 (61%), Gaps = 24/366 (6%)
Query: 22 KILVIGTVSGGSAVAFS---DSRPFQRIYGDSGEGE-FKKKKVVVLGTGWAGTTFLKILK 77
K+ T++G V++ +S P +++ + KKK++V+LGTGW + LK L
Sbjct: 58 KLTFYTTLAGTLYVSYELYKESNPPKQVPQSTAFANGLKKKELVILGTGWGAISLLKKLD 117
Query: 78 SNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKID 137
++ + V VVSPR++F FTPLLPS GT+E +SIVEP+R+I R+ ++ + EAE +D
Sbjct: 118 TSLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIVEPVRSIARRTPGEVHYIEAEALDVD 177
Query: 138 AEKKQIYCRTTEDRTCGGKEEF--ALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHA 195
+ K++ ++ + E F +L YD LV+++GA+ TFN PGV +A+FLKE+E A
Sbjct: 178 PKAKKVMVQSVSE-----DEYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDA 232
Query: 196 QRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPS 255
Q IR ++ E+AS ++D ERK++L FVVVGGGPTGVEFAA L D++ DL K P
Sbjct: 233 QNIRMKLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPD 292
Query: 256 LKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRAT 315
L + ++ L+EA +ILNMFDK + AE+ F RD IDL+ + V + I T
Sbjct: 293 LSKEMKVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRT--LQN 350
Query: 316 GQISS-IPYGMVVWSTGIGTRPVIMDFMKQI-----GQANRRVLATDEWLRVEGCE-SVY 368
GQ ++ I YGM+VW+T G P+ DF K + Q NRR L ++ L + G E S+Y
Sbjct: 351 GQTNTDIEYGMLVWAT--GNEPI--DFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIY 406
Query: 369 ALGDCA 374
A+GDC
Sbjct: 407 AIGDCT 412
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 56/130 (43%), Gaps = 23/130 (17%)
Query: 471 TAQVAAQEGAYLANCFNRMEQCEK-----------------NPEGPLRFRGAGRHRFHPF 513
TAQVA QEG YLA ++ Q E+ E LR + + F
Sbjct: 420 TAQVAHQEGEYLAKILDKKLQIEQLEWDMLNSTDETEVSRLQKEVNLR-----KSKLDKF 474
Query: 514 RYKHFGQFAPLGGEEAAAQLELPFDWISV-GRGSQWLWYSVYASKQISWRTRFLVISDWR 572
YKH G A +G E A A L + + G + W S Y + +S R R L+ DW
Sbjct: 475 NYKHMGALAYIGSETAIADLHMGDSSYQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWT 534
Query: 573 RRFMFGRDSS 582
+ + GRDSS
Sbjct: 535 KVYFLGRDSS 544
>sp|P32340|NDI1_YEAST Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDI1 PE=1 SV=1
Length = 513
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 206/333 (61%), Gaps = 15/333 (4%)
Query: 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIR 116
K V++LG+GW +FLK + + + V ++SPR+YF FTPLLPS GTV+ +SI+EPI
Sbjct: 53 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIV 112
Query: 117 NIVRKKGMDIQFKEAECYKIDAEKKQIYCRT---------TEDRTCGGKEEFA-LDYDIL 166
N KK ++ + EAE I+ ++ + ++ E+ + E A + YD L
Sbjct: 113 NFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYL 172
Query: 167 VIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFV 226
+ A+GA+ NTF PGV ++ HFLKE+ ++ IRR+ E+A+L D ER+++L V
Sbjct: 173 ISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIV 232
Query: 227 VVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEK 286
VVGGGPTGVE A L D+V DL K P+L E +I L+EA +LNMF+K++++ A+
Sbjct: 233 VVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSH 292
Query: 287 FKRDGIDLKTGSMVVKLSDKEISTKDR-ATGQIS--SIPYGMVVWSTGIGTRPVIMDFMK 343
+ I + + V K+ +K++ K + G+I+ +IPYG ++W+TG RPVI D K
Sbjct: 293 LENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFK 352
Query: 344 QIGQAN--RRVLATDEWLRVEGCESVYALGDCA 374
+I + N +R LA +++L+V+G +++A+GD A
Sbjct: 353 KIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNA 385
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 462 DSQMKHLPATAQVAAQEGAYLANCFNRMEQC---EKNPEG-----PLRFRGAGRHRFHPF 513
D+ LP TAQVA QE YLA F++M Q +KN L F + F PF
Sbjct: 383 DNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFE---ENNFKPF 439
Query: 514 RYKHFGQFAPLGGEEAAAQLELPFDWISVGRG--SQWLWYSVYASKQISWRTRFLVISDW 571
+Y G A LG E A A + G G + +LW +Y S +S R+R V DW
Sbjct: 440 KYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDW 499
Query: 572 RRRFMFGRD 580
+ F RD
Sbjct: 500 IKLAFFKRD 508
>sp|Q8GWA1|NDA1_ARATH Alternative NAD(P)H dehydrogenase 1, mitochondrial OS=Arabidopsis
thaliana GN=NDA1 PE=2 SV=1
Length = 510
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 204/338 (60%), Gaps = 20/338 (5%)
Query: 44 QRIYGDSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTN 103
QR G + E +K +V+VLG+GWAG LK + ++ ++V VSPRN+ FTPLL S
Sbjct: 60 QRYDGLAPTKEGEKPRVLVLGSGWAGCRVLKGIDTSIYDVVCVSPRNHMVFTPLLASTCV 119
Query: 104 GTVEARSIVEPIRN----IVRKKGMDIQFKEAECYKIDAEKKQIYCRT-TEDRTCGGKEE 158
GT+E RS+ EPI I R+ G + A C K+DA+ +++C T TE + +
Sbjct: 120 GTLEFRSVAEPISRIQPAISREPGS--YYFLANCSKLDADNHEVHCETVTEGSSTLKPWK 177
Query: 159 FALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEE 218
F + YD LV+A GA+A+TF GV+E+A FL+EV HAQ IRR ++ + +P + ++E
Sbjct: 178 FKIAYDKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRKLLLNLMLSEVPGIGEDE 237
Query: 219 RKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKR 278
+K++LH VVVGGGPTGVEF+ L DF++ D+ + Y +K+ R+TL+EA D IL+ FD R
Sbjct: 238 KKRLLHCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEARD-ILSSFDDR 296
Query: 279 ITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVI 338
+ A ++ + G+ L G + KE+ + + +PYG +VWSTG+G +
Sbjct: 297 LRHYAIKQLNKSGVKLVRGIV------KEVKPQKLILDDGTEVPYGPLVWSTGVGPSSFV 350
Query: 339 --MDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCA 374
+DF K G + DEW+RV + V+A+GDC+
Sbjct: 351 RSLDFPKDPGGR----IGIDEWMRVPSVQDVFAIGDCS 384
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 468 LPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRF-HPFRYKHFGQFAPLGG 526
LPA AQVA +EG YLAN FN M + G R A PF YKH G A +G
Sbjct: 395 LPALAQVAEREGKYLANLFNVMGKA-----GGGRANSAKEMELGEPFVYKHLGSMATIGR 449
Query: 527 EEAAAQLELPFDWISV---GRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSR 583
+A L + + G S ++W S Y ++ +SWR RF V +W F+FGRD SR
Sbjct: 450 YKALVDLRESKEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDISR 509
Query: 584 I 584
I
Sbjct: 510 I 510
>sp|O80874|NDA2_ARATH Alternative NAD(P)H dehydrogenase 2, mitochondrial OS=Arabidopsis
thaliana GN=NDA2 PE=1 SV=1
Length = 508
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 199/330 (60%), Gaps = 22/330 (6%)
Query: 52 EGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSI 111
EGE K +VVVLG+GWAG +K + +N ++V VSPRN+ FTPLL S GT+E RS+
Sbjct: 68 EGE--KPRVVVLGSGWAGCRLMKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSV 125
Query: 112 VEPIRN----IVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKE-EFALDYDIL 166
EPI I R+ G F A C ++DA+ +++C T D K +F + YD L
Sbjct: 126 AEPISRIQPAISREPGS--FFFLANCSRLDADAHEVHCETLTDGLNTLKPWKFKIAYDKL 183
Query: 167 VIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFV 226
VIA GA+A+TF GV+E+A FL+EV HAQ IRR ++ + P +S EE++++LH V
Sbjct: 184 VIASGAEASTFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRRLLHCV 243
Query: 227 VVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEK 286
VVGGGPTGVEF+ L DF++ D+ + Y +K+ +TL+EA D IL+ FD R+ A ++
Sbjct: 244 VVGGGPTGVEFSGELSDFIMKDVRQRYAHVKDDIHVTLIEARD-ILSSFDDRLRRYAIKQ 302
Query: 287 FKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIG 346
+ G+ G + K++ ++ + +PYG++VWSTG+G P F++ +G
Sbjct: 303 LNKSGVRFVRGIV------KDVQSQKLILDDGTEVPYGLLVWSTGVGPSP----FVRSLG 352
Query: 347 QANRRV--LATDEWLRVEGCESVYALGDCA 374
+ DEW+RV + V+A+GDC+
Sbjct: 353 LPKDPTGRIGIDEWMRVPSVQDVFAIGDCS 382
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 468 LPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGE 527
LPA AQVA +EG YLAN N + + + G PF YKH G A +G
Sbjct: 393 LPALAQVAEREGKYLANLLNAIGKGNGGRANSAKEIELGV----PFVYKHLGSMATIGRY 448
Query: 528 EAAAQLELPFDWISV---GRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI 584
+A L D + G S ++W S Y ++ ISWR RF V +W F+FGRD SRI
Sbjct: 449 KALVDLRESKDAKGISMTGFVSWFIWRSAYLTRVISWRNRFYVAINWFTTFVFGRDISRI 508
>sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1
SV=2
Length = 434
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 149/309 (48%), Gaps = 24/309 (7%)
Query: 74 KILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133
K+ + ++ +V + + PLL V G+++ V+ + + + QF+
Sbjct: 27 KLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEG--VDALSYLAHARNHGFQFQLGSV 84
Query: 134 YKIDAEKKQIYCRTTEDRTCGGK---EEFALDYDILVIAMGAQANTFNTPGVVEHAHFLK 190
ID E K I D G+ E + YD LV+A+G+ +N FNTPGV E+ FL
Sbjct: 85 IDIDREAKTITIAELRDEK--GELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLD 142
Query: 191 EVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLS 250
A+R + +++ F + S NL + I +VGGG TGVE +A LH+ V S
Sbjct: 143 NPHQARRFHQEMLNLFLKYS-ANLGANGKVNI---AIVGGGATGVELSAELHNAVKQLHS 198
Query: 251 KLYPSL-KEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEIS 309
Y L E +TL+EAG+ IL RI+A+A + + G+ + T +MV + +
Sbjct: 199 YGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLH 258
Query: 310 TKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIG--QANR-RVLATDEWLRVEGCES 366
TKD I ++VW+ GI DF+K IG + NR L + L+
Sbjct: 259 TKDG-----EYIEADLMVWAAGIKAP----DFLKDIGGLETNRINQLVVEPTLQTTRDPD 309
Query: 367 VYALGDCAT 375
+YA+GDCA+
Sbjct: 310 IYAIGDCAS 318
>sp|Q49W80|Y1834_STAS1 NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1834 PE=3 SV=1
Length = 402
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 155/322 (48%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + ++ EV +++ +Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTITKLQKQISADEAEVTLINKNDYHYEATWLHEASAGTISYEDLL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++V K + F +AE KID K++ T G D+DILV+++G
Sbjct: 65 YPVESVVNKD--KVNFVKAEVTKIDRNAKKV-------ETDAG----IFDFDILVVSLGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
++ TF G+ ++A ++ V A+++ R + D F + D+ K L +V G G
Sbjct: 112 ESETFGIKGMKDYAFQIENVLTARKLSRHIEDKFANYASSKQKDD---KDLAIIVGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D I +L Y + +IT +EA +L MF + A + G+
Sbjct: 169 TGVEFLGELTDR-IPELCNKYGVEQSKVKITCVEAAPKMLPMFSDELVNHAVNYLENKGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K G+ +V ++K K + + VVW+ G+ ++ + + + R
Sbjct: 228 EFKIGTPIVAANEKGFVVK--VNDEEQQLEANTVVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L +EG + ++ +GDC+
Sbjct: 283 IVTKQDLTIEGYDDIFVIGDCS 304
>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKTISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
(strain COL) GN=SACOL0944 PE=3 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0903 PE=3 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
(strain MW2) GN=MW0823 PE=3 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0811 PE=3 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
(strain N315) GN=SA0802 PE=1 SV=1
Length = 402
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K + + E+ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ ++++K + F +AE KID + K++ + D+DILV+A+G
Sbjct: 65 YPVESVLKKD--KVNFVQAEVTKIDRDAKKVETN-----------QGIYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ +HA ++ V A+ + R + D F + D+ IL V G G
Sbjct: 112 VSETFGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSIL---VGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TGVEF L D + + SK Y + +IT +EA +L MF + + A + G+
Sbjct: 169 TGVEFLGELTDRIPELCSK-YGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L + G ++++ +GDC+
Sbjct: 283 IVTKQDLTINGYDNIFVIGDCS 304
>sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1
Length = 402
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 154/322 (47%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K L +++ E+ +++ Y + L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHEASAGTINYEDLL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ V K + F AE KID K++ ++ D+DILV+A+G
Sbjct: 65 YPVEKTVNKN--KVNFVVAEVTKIDRNAKRVET-----------DKGVYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ EHA ++ V ++++ R + D F + S E+ K L +V G G
Sbjct: 112 VSETFGIDGMKEHAFQIENVLTSRKLSRHIEDKFANYA---ASKEKDDKDLSILVGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TG+EF L D + + SK Y + ++T +EA +L MF + + A + + G+
Sbjct: 169 TGIEFLGELTDRIPELCSK-YGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVE--VNGEKQQLEAGTSVWTAGVRGSHLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ + L +EG ++ +GDC+
Sbjct: 283 IINKQDLTIEGHNDIFVIGDCS 304
>sp|Q4L4V6|Y2010_STAHJ NADH dehydrogenase-like protein SH2010 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1
Length = 402
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 155/322 (48%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K L ++ ++ +++ Y L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKELSADEADITLINKNKYHYEATWLHEASAGTLNYEDLI 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
PI +++++ ++F AE KID K++ T G DYDILV+A+G
Sbjct: 65 YPIESVIKED--KVKFINAEVTKIDRNAKKV-------ETNHG----IYDYDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
++ TF G+ ++A ++ +E A+++ R + D F + S E+ K L +V G G
Sbjct: 112 ESETFGINGMKDYAFQIENIETARKLSRHIEDKFANYA---ASKEKDDKDLAILVGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TG+EF L + I +L Y + R+T +EA +L MF + A + G+
Sbjct: 169 TGIEFLGELTER-IPELCNKYGVDQNKVRVTCVEAAPKMLPMFSDELVNYAVNYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K K Q + G +W+ G+ ++ + + + R
Sbjct: 228 EFKIATPIVACNEKGFVVK--INDQEQQLEAGTAIWAAGVRGSKLMEESFEGV---KRGR 282
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ T + L +EG + ++ +GD +
Sbjct: 283 IVTKQDLTIEGHDDIFVIGDVS 304
>sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3
SV=1
Length = 402
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 156/322 (48%), Gaps = 26/322 (8%)
Query: 57 KKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIV 112
+KKV+VLG G+AG T K L +++ E+ +++ Y + L + GT+ ++
Sbjct: 5 RKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHEASAGTINYEDLL 64
Query: 113 EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
P+ V K + F AE KID K++ ++ D+DILV+A+G
Sbjct: 65 YPVEKTVNKD--KVNFVVAEVTKIDRNAKRVET-----------DKGVYDFDILVVALGF 111
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
+ TF G+ EHA ++ V ++++ R + D F + S E+ K L +V G G
Sbjct: 112 VSETFGIDGMKEHAFQIENVLTSRKLSRHIEDKFANYA---ASKEKDDKDLSILVGGAGF 168
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
TG+EF L D + + SK Y + ++T +EA +L MF + + A + + G+
Sbjct: 169 TGIEFLGELTDRIPELCSK-YGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKYLEDRGV 227
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ K + +V ++K + G+ + G VW+ G+ ++ + + + + RV
Sbjct: 228 EFKIATPIVACNEKGFVVE--VNGEKQQLEAGTSVWTAGVRGSHLMEESFEGVKRG--RV 283
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+ + L +EG ++ +GDC+
Sbjct: 284 INKQD-LTIEGHNDIFVIGDCS 304
>sp|P44856|DHNA_HAEIN NADH dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=ndh PE=3 SV=1
Length = 444
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 34/328 (10%)
Query: 71 TFL--KILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQF 128
TFL K+ + +V +V + PLL + G ++ V+ + K F
Sbjct: 18 TFLGNKLGRQKQAKVTLVDRNATHLWKPLLHEIATGVMDDG--VDSLSYRAHGKNHFFSF 75
Query: 129 KEAECYKIDAEKKQIYCRTTEDRTCGGKEEFAL------DYDILVIAMGAQANTFNTPGV 182
++ +I+ E+K + E G+E L YD LVIA+G+++N FNT GV
Sbjct: 76 EQGSIIRINREQKYV-----ELAPVYGQEGDMLVIARRIPYDYLVIAIGSKSNDFNTKGV 130
Query: 183 VEHAHFLKEVEHAQRIRRSVIDCF----ERASLPNLSDEERKKIL------HFVVVGGGP 232
++ FL + A R + +++ F E +L ++ +EE K+ L + +VGGG
Sbjct: 131 ADNCIFLDSSKQALRFQHKLLELFLKFSENRALDDIGEEEFKQKLVDENKVNIAIVGGGA 190
Query: 233 TGVEFAAALHDFVIDDLSKLYPSL-KEFTRITLLEAGDHILNMFDKRITASAEEKFKRDG 291
TGVE A L+ D S Y + ++TL+EAG +L + ++A+ ++ K G
Sbjct: 191 TGVELTAELYHAAEDLSSYGYGKIDSSCLQVTLVEAGTRLLPALPENLSAAVLDELKEMG 250
Query: 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMK-QIGQANR 350
+++ +M+ + + TKD G+I + ++VW+ G+ V F +I + N+
Sbjct: 251 TNVQLNTMITEAQPNTLITKD--GGEIKA---DLIVWAAGVRASTVTQQFDGLEINRINQ 305
Query: 351 RVLATDEWLRVEGCESVYALGDCATINQ 378
L + L+ +S++A+GDCA + Q
Sbjct: 306 --LVVKDTLQTTVDDSIFAIGDCAALIQ 331
>sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain
168) GN=yumB PE=3 SV=1
Length = 406
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 31/327 (9%)
Query: 55 FKKKKVVVLGTGWAG----TTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARS 110
K K+V+LG G+ G T K + N ++ +V+ NY T + + GT+
Sbjct: 3 LNKPKIVILGAGYGGLMTVTRLTKYVGPNDADITLVNKHNYHYETTWMHEASAGTLHHDR 62
Query: 111 IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAM 170
I++++ + ++ + KID EKK + L YD LVI +
Sbjct: 63 CRYQIKDVINQSRVNFVQDTVKAIKID-EKKVVLANG------------ELQYDYLVIGL 109
Query: 171 GAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGG 230
GA TF G+ E+A + + ++ +R + F + N E+R L VV G
Sbjct: 110 GAVPETFGIKGLKEYAFPIANINTSRLLREHIELQF---ATYNTEAEKRPDRLTIVVGGA 166
Query: 231 GPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRD 290
G TG+EF L V +L K Y + RI +EA +L FD + A + +
Sbjct: 167 GFTGIEFLGELAARV-PELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYLEEN 225
Query: 291 GIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQA 348
G++ K G+ V + + + + KD QI S VVW+ G+ P++ ++ G
Sbjct: 226 GVEFKIGTAVQECTPEGVRVGKKDEEPEQIKS---QTVVWAAGVRGHPIV----EEAGFE 278
Query: 349 NRR-VLATDEWLRVEGCESVYALGDCA 374
N R + + LR G ++V+ LGD +
Sbjct: 279 NMRGRVKVNPDLRAPGHDNVFILGDSS 305
>sp|P80861|YJLD_BACSU NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain
168) GN=yjlD PE=1 SV=3
Length = 392
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 32/322 (9%)
Query: 58 KKVVVLGTGWAGT-TFLKILKSNSFE---VQVVSPRNYFAFTPLLPSVTNGTVEARSIVE 113
K +V+LG G+ G + L + K + E V VV+ L + G V +++
Sbjct: 3 KHIVILGAGYGGVLSALTVRKHYTKEQARVTVVNKYPTHQIITELHRLAAGNVSEKAVAM 62
Query: 114 PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQ 173
P+ + + K +D++ E + +D ++ + +T L YD LV+ +G+
Sbjct: 63 PLEKLFKGKDIDLKIAEVSSFSVDKKEVALADGST------------LTYDALVVGLGSV 110
Query: 174 ANTFNTPGVVEHAHFLKEVEHAQRIRRSVID-CFERASLPNLSDEERKKILHFVVVGGGP 232
F PG+ E++ LK A ++ + V D E + N +D +
Sbjct: 111 TAYFGIPGLEENSMVLKSAADANKVFQHVEDRVREYSKTKNEADATILIGGGGLTG---- 166
Query: 233 TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292
VE L D ++ +L+K Y + ++ L+EAG IL + + A ++ G+
Sbjct: 167 --VELVGELAD-IMPNLAKKYGVDHKEIKLKLVEAGPKILPVLPDDLIERATASLEKRGV 223
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRV 352
+ TG V + I KD S + VW+ G+ P++ + ++ NR
Sbjct: 224 EFLTGLPVTNVEGNVIDLKDG-----SKVVANTFVWTGGVQGNPLVGESGLEV---NRGR 275
Query: 353 LATDEWLRVEGCESVYALGDCA 374
+++L+ E V+ GD A
Sbjct: 276 ATVNDFLQSTSHEDVFVAGDSA 297
>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
168) GN=yutJ PE=3 SV=2
Length = 355
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 58 KKVVVLGTGWAGTTFLKILKSNSF----EVQVVSPRNYFAFTPLLPSVTNGTVEARSIVE 113
KK+V++G G+ L L N + ++ Y ++ GT+ I
Sbjct: 2 KKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCLKTEYYALAAGTISDHHIRV 61
Query: 114 PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQ 173
R +D+Q+ + ID +KQ+ + E + YD +I +G +
Sbjct: 62 SFPEHPR---LDVQY--GDITSIDIVQKQVLFQDRE----------PISYDDAIIGLGCE 106
Query: 174 ANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPT 233
N PG E + ++ ++ ++ + + + A++ +VG G +
Sbjct: 107 DKYHNVPGAPEFTYSIQTIDQSRETYQKLNNLSANATV--------------AIVGAGLS 152
Query: 234 GVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGID 293
GVE A+ L + DDL+ I L + G+ IL+ F +R++ ++ F+ G+
Sbjct: 153 GVELASELRESR-DDLN-----------IILFDRGNLILSSFPERLSKYVQKWFEEHGVR 200
Query: 294 LKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVL 353
+ + + K+ + + D I +VW+ GI V+ D + R VL
Sbjct: 201 IINRANITKVEEGVVYNHD------DPISADAIVWTAGIQPNKVVRDLDVEKDAQGRIVL 254
Query: 354 ATDEWLRVEGCESVYALGDCATI 376
L G E +Y +GDCA++
Sbjct: 255 TPHHNL--PGDEHLYVVGDCASL 275
>sp|P75389|NAOX_MYCPN Probable NADH oxidase OS=Mycoplasma pneumoniae (strain ATCC 29342 /
M129) GN=nox PE=3 SV=1
Length = 479
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 136/333 (40%), Gaps = 39/333 (11%)
Query: 58 KKVVVLGTGWAGTTFLKIL--KSNSFEVQVVSPRNYFAF--TPLLPSVTNGTVEARSIVE 113
KKV+V+G AGT+F++ L KS F+V +F + +V+ +
Sbjct: 2 KKVIVIGVNHAGTSFIRTLLSKSKDFQVNAYDRNTNISFLGCGIALAVSGVVKNTEDLFY 61
Query: 114 PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQ 173
++ G ++ F + +D +KKQ+ + D G +E YD LV+A GA
Sbjct: 62 STPEELKAMGANV-FMAHDVVGLDLDKKQVIVK---DLATG--KETVDHYDQLVVASGAW 115
Query: 174 ANTFNTPGVVEHAHFLKEVEHAQRI---RRSVIDCFERASLPNLSDEER--KKILHFVVV 228
N V H + H + +++I C L D R K I +V
Sbjct: 116 PICMNVENEVTHTQL--QFNHTDKYCGNIKNLISCKLYQHALTLIDSFRHDKSIKSVAIV 173
Query: 229 GGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLE--AGDHILNMFDKRITASAEEK 286
G G G+E A A + K+ T I +L+ AG N FD+ T E+
Sbjct: 174 GSGYIGLELAEA-----------AWQCGKQVTVIDMLDKPAG----NNFDEEFTNELEKA 218
Query: 287 FKRDGIDLKTGSMV---VKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMK 343
K+ GI+L GS V + +DK + K T + + +V+ S G + +
Sbjct: 219 MKKAGINLMMGSAVKGFIVDADKNV-VKGVETDK-GRVDADLVIQSIGFRPNTQFVPKDR 276
Query: 344 QIGQANRRVLATDEWLRVEGCESVYALGDCATI 376
Q + +E+L+ E+VY +G A I
Sbjct: 277 QFEFNRNGSIKVNEYLQALNHENVYVIGGAAAI 309
>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NDC1 PE=1 SV=2
Length = 519
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 165/403 (40%), Gaps = 79/403 (19%)
Query: 30 SGGSAVAFSDSRPFQRIYGDSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSF------EV 83
SG + ++ +++ P + D+ K+ +V +LG G+ G L+S + +V
Sbjct: 58 SGTTEISDNETAPRTYSWPDN-----KRPRVCILGGGFGGLYTALRLESLVWPEDKKPQV 112
Query: 84 QVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQI 143
+V F F P+L + +G V+ I +++ G IQF D K +
Sbjct: 113 VLVDQSERFVFKPMLYELLSGEVDVWEIAPRFSDLLTNTG--IQFLR------DRVKTLL 164
Query: 144 YC-----RTTEDRTCGG----KEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEH 194
C +E GG + F ++YD LV+A+GA++ PG +E A +E
Sbjct: 165 PCDHLGVNGSEISVTGGTVLLESGFKIEYDWLVLALGAESKLDVVPGAMELAFPFYTLED 224
Query: 195 AQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYP 254
A R+ + ER N D K+ VVG G GVE AA + +
Sbjct: 225 AIRVNEK-LSKLERK---NFKDGSAIKV---AVVGCGYAGVELAATISE----------- 266
Query: 255 SLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK-------- 306
L++ + + +IL +A + + L G +V +
Sbjct: 267 RLQDRGIVQSINVSKNILTSAPDGNREAAMKVLTSRKVQLLLGYLVQSIKRASNLEEDEG 326
Query: 307 ---EISTKDRAT-GQISSIPYGMVVWSTGIGTRPVIMDF---------MKQIGQANRRVL 353
E+ +R QI I +V+W+ +G +P++ + GQA
Sbjct: 327 YFLELQPAERGLESQI--IEADIVLWT--VGAKPLLTKLEPSGPNVLPLNARGQAE---- 378
Query: 354 ATDEWLRVEGCESVYALGDCATI--NQRKVMEDISAI-FSKAD 393
TDE LRV+G ++ALGD +++ + K++ + + F +AD
Sbjct: 379 -TDETLRVKGHPRIFALGDSSSLRDSNGKILPTTAQVAFQEAD 420
>sp|Q49408|NAOX_MYCGE Probable NADH oxidase OS=Mycoplasma genitalium (strain ATCC 33530 /
G-37 / NCTC 10195) GN=nox PE=3 SV=1
Length = 478
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 137/344 (39%), Gaps = 61/344 (17%)
Query: 58 KKVVVLGTGWAGTTFLKIL--KSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPI 115
KKV+V+G AGT+F++ L KS F+V +F G A ++ +
Sbjct: 2 KKVIVIGINHAGTSFIRTLLSKSKDFKVNAYDRNTNISFL--------GCGIALAVSGVV 53
Query: 116 RNI----------VRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDI 165
+N +++ G +I F + ID KKQ+ T D T +EF +D
Sbjct: 54 KNTDDLFYSNPEELKQMGANI-FMSHDVTNIDLIKKQV---TVRDLT--SNKEFTDQFDQ 107
Query: 166 LVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRI---RRSVIDCFERASLPNLSDEER--K 220
LVIA GA N V H E + + +++I C L D R K
Sbjct: 108 LVIASGAWPICMNVENKVTHKPL--EFNYTDKYCGNVKNLISCKLYQHALTLIDSFRKDK 165
Query: 221 KILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLE--AGDHILNMFDKR 278
I +VG G G+E A A + K+ T I LL+ AG N FD
Sbjct: 166 TIKSVAIVGSGYIGLELAEA-----------AWLCKKQVTVIDLLDKPAG----NNFDHE 210
Query: 279 ITASAEEKFKRDGIDLKTG----SMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGT 334
T E+ ++DG+ L G VV ++ + + G +++ + + IG
Sbjct: 211 FTDELEKVMQKDGLKLMMGCSVKGFVVDSTNNVVKGVETDKGIVNA-----DLVNQSIGF 265
Query: 335 RPVIMDFMK--QIGQANRRVLATDEWLRVEGCESVYALGDCATI 376
RP K + + +E+L+ + VY +G CA I
Sbjct: 266 RPSTKFVPKDQNFEFIHNGSIKVNEFLQALNHKDVYVIGGCAAI 309
>sp|Q9Z773|DLDH_CHLPN Dihydrolipoyl dehydrogenase OS=Chlamydia pneumoniae GN=lpdA PE=3
SV=1
Length = 461
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 225 FVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284
++GGG G EFA+ H ++ IT++EA DHIL + +K ++ +
Sbjct: 173 LAIIGGGVIGCEFASLFHTLGVE--------------ITVIEALDHILAVNNKEVSQTVT 218
Query: 285 EKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ 344
KF + GI + T + + + + + + Q+ Y +V T + +D
Sbjct: 219 NKFTKQGIRILTKASISAIEESQNQVRITVNDQVEEFDYVLVAIGRQFNTASIGLDNAGV 278
Query: 345 IGQANRRVLATDEWLRVEGCESVYALGD 372
I + +R V+ DE +R ++YA+GD
Sbjct: 279 I-RDDRGVIPVDETMRTN-VPNIYAIGD 304
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 38 SDSRPF------QRIYGDSG--EGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89
S+ RPF RI +G E E KK+ ++G G G F + + E+ V+
Sbjct: 143 SEPRPFPGVPFSSRILSSTGILELEVLPKKLAIIGGGVIGCEFASLFHTLGVEITVIEAL 202
Query: 90 NYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTE 149
++ V + + + + N K+G+ I +A I+ + Q+ T
Sbjct: 203 DHIL-----------AVNNKEVSQTVTNKFTKQGIRI-LTKASISAIEESQNQVRI-TVN 249
Query: 150 DRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIR--RSVIDCFE 207
D+ EEF D +++A+G Q FNT + +++A IR R VI E
Sbjct: 250 DQV----EEF----DYVLVAIGRQ---FNTASI--------GLDNAGVIRDDRGVIPVDE 290
Query: 208 --RASLPNL 214
R ++PN+
Sbjct: 291 TMRTNVPNI 299
>sp|Q58065|NAOX_METJA Putative NADH oxidase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ0649 PE=3 SV=2
Length = 448
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 150/325 (46%), Gaps = 48/325 (14%)
Query: 59 KVVVLGTGWAG-TTFLKILKSN-SFEVQVVSPRNYFAFTPL-LPSVTNGTVEARS--IVE 113
+ +++G+G AG TT I K N E+ V++ A++P +P V G +++ I+
Sbjct: 2 RAIIIGSGAAGLTTASTIRKYNKDMEIVVITKEKEIAYSPCAIPYVIEGAIKSFDDIIMH 61
Query: 114 PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQ 173
+ R++ +DI E +D++ +I C + EF ++YD LV+A GA+
Sbjct: 62 TPEDYKRERNIDI-LTETTVIDVDSKNNKIKCVDKDGN------EFEMNYDYLVLATGAE 114
Query: 174 ANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPT 233
F P +E K+++ ++ R++ D RA L + + KK+ VVG G
Sbjct: 115 --PFIPP--IEG----KDLDGVFKV-RTIED--GRAILKYIEENGCKKV---AVVGAGAI 160
Query: 234 GVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMF-DKRITASAEEKFKRDGI 292
G+E A L +D + ++E +L F D + ++ +++GI
Sbjct: 161 GLEMAYGLKCRGLD--------------VLVVEMAPQVLPRFLDPDMAEIVQKYLEKEGI 206
Query: 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIG-QANRR 351
+ + K+ KE G++ + MV+ +TG+ RP I + K+ G + +
Sbjct: 207 KVMLSKPLEKIVGKEKVEAVYVDGKLYDV--DMVIMATGV--RPNI-ELAKKAGCKIGKF 261
Query: 352 VLATDEWLRVEGCESVYALGDCATI 376
+ +E ++ ++YA+GDC +
Sbjct: 262 AIEVNEKMQTS-IPNIYAVGDCVEV 285
>sp|Q40977|MDAR_PEA Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1
Length = 433
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 45/224 (20%)
Query: 161 LDYDILVIAMGAQANTFNTPGVV----EHAHFLKEVEHAQRIRRSVIDCFERASLPNLSD 216
DY LVIA G+ GV+ ++ +L+EV+ A ++ ++
Sbjct: 112 FDYQTLVIATGSAVIRLTDFGVIGANAKNIFYLREVDDADKLYEAI-------------- 157
Query: 217 EERKKILHFVVVGGGPTGVEFAAA--LHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM 274
+RKK VVVGGG G+E +A L+D D++ +YP R +
Sbjct: 158 -KRKKNAKRVVVGGGYIGLELSAVLKLNDL---DVTMVYPEPWCMPR------------L 201
Query: 275 FDKRITASAEEKFKRDGIDLKTGSMVVKL---SDKEISTKDRATGQISSIPYGMVVWSTG 331
F I A E + GI++ G++ V SD E+ G++ +V G
Sbjct: 202 FTSEIAAFYEGYYANKGINIIKGTVAVGFTANSDGEVKEVKLKDGRVLEADIVIV----G 257
Query: 332 IGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCAT 375
+G RP I F Q+ + + TD + + VYA+GD AT
Sbjct: 258 VGGRPQISLFKGQV-EEQHGGIKTDSFFKTS-VPDVYAVGDVAT 299
>sp|P11959|DLDH1_GEOSE Dihydrolipoyl dehydrogenase OS=Geobacillus stearothermophilus
GN=pdhD PE=1 SV=2
Length = 470
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 22/153 (14%)
Query: 225 FVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284
VV+GGG G+E A +F T++T+LE IL+ F+K++ A +
Sbjct: 179 LVVIGGGYIGIELGTAYANF--------------GTKVTILEGAGEILSGFEKQMAAIIK 224
Query: 285 EKFKRDGIDLKTGSMVVKLSDKE--ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDF- 341
++ K+ G+++ T ++ ++E ++ A G+ +I V+ + +G RP +
Sbjct: 225 KRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVT--VGRRPNTDELG 282
Query: 342 MKQIG--QANRRVLATDEWLRVEGCESVYALGD 372
++QIG NR ++ D+ R +++A+GD
Sbjct: 283 LEQIGIKMTNRGLIEVDQQCRTS-VPNIFAIGD 314
>sp|Q54NS9|AIFA_DICDI Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum
GN=aifA PE=3 SV=1
Length = 408
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 74/348 (21%)
Query: 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPI 115
+KK+V+++G G+ G+ K+L SN FEV VV + F N R+IVEP
Sbjct: 26 EKKRVLIIGCGFGGSQVAKLLDSN-FEVTVVERKQTFF---------NSIASIRAIVEP- 74
Query: 116 RNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTC-----GGKEEFALDYDILVIAM 170
K + I + K+ K IY E GKE L +D LVIA
Sbjct: 75 ---ELAKKIYIPYD-----KLLKNGKFIYGTVIEISPTLVKLEDGKE---LTFDYLVIAT 123
Query: 171 GAQA-NTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVG 229
G+ + F P L+++ + + + ++ S E+ K+ ++VG
Sbjct: 124 GSNSLAPFKAP--------LEKISGTE-----IFNYYKDIS------EQIKQAKSILIVG 164
Query: 230 GGPTGVEFAAALHDFVIDDLSKLYP-SLKEFTR-ITLLEAGDHIL-----NMFDKRITAS 282
GG G E V+ ++ YP KE + IT++ +G+ ++ N F+ I S
Sbjct: 165 GGSVGCE--------VVGEIINKYPIKNKELAKKITIVHSGNKLVSSKTNNKFNNLINES 216
Query: 283 AEEK----FKRDGI----DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGI-- 332
+++ D I D+K + + ++S K T SI V+W+ GI
Sbjct: 217 MKKRNVSVILNDRIEIPDDIKQCFINQTSPNFQVSLKTYKTKNGLSIESDFVIWTIGIKL 276
Query: 333 GTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCATINQRK 380
+ +F +I + + + ++ +V+G ++++A+GD ++ K
Sbjct: 277 NSESYKTNFSNEINEIGQ--IKVNQSCQVQGYDNIFAIGDITDFDELK 322
>sp|Q9LK94|MDAR2_ARATH Probable monodehydroascorbate reductase, cytoplasmic isoform 2
OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1
Length = 488
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 65/254 (25%)
Query: 136 IDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGV----VEHAHFLKE 191
+D +K + T E + Y L+IA GA+A GV E+ +L++
Sbjct: 97 VDVRRKTLLSSTGE----------TISYKFLIIATGARALKLEEFGVEGSDAENVCYLRD 146
Query: 192 VEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSK 251
+ A R+ +VI + VV+GGG G+E AA+L VI+ ++
Sbjct: 147 LADANRLA-TVIQSSSNGNA--------------VVIGGGYIGMECAASL---VINKIN- 187
Query: 252 LYPSLKEFTRITLLEAGDHIL-NMFDKRITASAEEKFKRDGIDLKTGSMVVKL---SDKE 307
+T++ H + +F +I + E+ ++ G+ G+++ S+K+
Sbjct: 188 ----------VTMVFPEAHCMARLFTPKIASLYEDYYRAKGVKFIKGTVLTSFEFDSNKK 237
Query: 308 ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIG------QANRRVLATDEWLRV 361
++ + G S +P +VV GIG RP F Q+ + N R+ ++D
Sbjct: 238 VTAVNLKDG--SHLPADLVV--VGIGIRPNTSLFEGQLTIEKGGIKVNSRMQSSD----- 288
Query: 362 EGCESVYALGDCAT 375
SVYA+GD AT
Sbjct: 289 ---SSVYAIGDVAT 299
>sp|Q10499|AIF1_SCHPO Apoptosis-inducing factor 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=aif1 PE=3 SV=3
Length = 611
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 38/253 (15%)
Query: 124 MDIQFK-EAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGV 182
+DI F + KID +K+IYC G E+ Y L++A G + N PG+
Sbjct: 259 LDISFHFNTDVTKIDLAEKKIYC--------GSDEKPTESYTKLILATGGEPNKLPIPGL 310
Query: 183 VEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALH 242
+L RS+ D + A++ + +++ + V++G G+E A L
Sbjct: 311 DSKNVYL---------LRSIADASKLAAVTTEAGDKK----NIVIIGSSFIGLELAVVLK 357
Query: 243 DFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKR-ITASAEEKFKRDGIDLKTGSMVV 301
D ++S + F ++ E G + + ++ I E K ++KT S
Sbjct: 358 DH---NVSVIGMESIPFEKVMGKEVGTALKALHEQNGIAFYLENSIK----EVKTSSNDS 410
Query: 302 KLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRV 361
++ I KD GQ SIP +V+ + G+ +P + + + DE RV
Sbjct: 411 SKAE-HIVLKD---GQ--SIPADVVILAAGV--KPNLRYLGNAVSLEKDGGVKVDEHCRV 462
Query: 362 EGCESVYALGDCA 374
G E VYA+GD A
Sbjct: 463 LGAEDVYAVGDIA 475
>sp|Q9UYU5|CDR_PYRAB Coenzyme A disulfide reductase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB14120 PE=3 SV=1
Length = 446
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 52/300 (17%)
Query: 81 FEVQVVSPRNYFAFTPL-LPSVTNGTVEARSIVE-PIRNIVRKKGMDIQFKEAECYKIDA 138
++V+V + + P +P V G ++ P ++K+G+D+ AE ++D
Sbjct: 33 WDVKVFEATEWVSHAPCGIPYVVEGISPTEKLMHYPPEVFIKKRGIDLHLN-AEVIEVDT 91
Query: 139 EKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVE-HAQR 197
Y R R G++ + DY LV A GA GV F ++ A
Sbjct: 92 G----YVRV---REKDGEKSYEWDY--LVFANGASPQVPAIEGVDLKGVFTADLPPDAVA 142
Query: 198 IRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLK 257
IR + E+ ++ V+VGGG G+E A A +
Sbjct: 143 IREYM---------------EKNRVEDVVIVGGGYIGLEMAEAF--------------VA 173
Query: 258 EFTRITLLEAGDHIL-NMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATG 316
+ R+T++ G+ IL FDK +T EEK K+ ++L+ +V+++ K+ ++
Sbjct: 174 QGKRVTMIVRGERILRRSFDKEVTDIIEEKLKQH-VNLRLQEIVLRIEGKD--RVEKVVT 230
Query: 317 QISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCA 374
+V+ +TGI +P I + +Q+G + T+E ++ E+VYA GD A
Sbjct: 231 DAGEYRADLVILATGI--KPNI-ELARQLGVRIGETGAIWTNEKMQTS-VENVYAAGDVA 286
>sp|P16640|CAMA_PSEPU Putidaredoxin reductase OS=Pseudomonas putida GN=camA PE=1 SV=1
Length = 422
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 135/333 (40%), Gaps = 69/333 (20%)
Query: 59 KVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPI--R 116
VV++GTG AG L+++ +E + + LP ++ + ++ E + R
Sbjct: 6 NVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLR 65
Query: 117 NIVRKKGMDIQF-KEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQAN 175
+IQ + I+ +++Q+ + ALDYD LV+A G +
Sbjct: 66 TPDAYAAQNIQLLGGTQVTAINRDRQQVIL----------SDGRALDYDRLVLATGGRPR 115
Query: 176 TFNTP-GVVEHAH---FLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGG 231
G V A+ +L+ +E A+ IRR +I +D VV+GGG
Sbjct: 116 PLPVASGAVGKANNFRYLRTLEDAECIRRQLI-----------ADN------RLVVIGGG 158
Query: 232 PTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKF---- 287
G+E AA ++K +TLL+ +L +R+TA F
Sbjct: 159 YIGLEVAAT--------------AIKANMHVTLLDTAARVL----ERVTAPPVSAFYEHL 200
Query: 288 -KRDGIDLKTGSMVVKLSDKEISTKDRATGQI-----SSIPYGMVVWSTGIGTRPVIMDF 341
+ G+D++TG+ V E+ST + + + +P +V+ GIG P +
Sbjct: 201 HREAGVDIRTGTQVCGF---EMSTDQQKVTAVLCEDGTRLPADLVI--AGIGLIPN-CEL 254
Query: 342 MKQIGQANRRVLATDEWLRVEGCESVYALGDCA 374
G + +E ++ + A+GDCA
Sbjct: 255 ASAAGLQVDNGIVINEHMQTSD-PLIMAVGDCA 286
>sp|P92947|MDARP_ARATH Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis
thaliana GN=At1g63940 PE=2 SV=3
Length = 493
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 61/265 (23%)
Query: 120 RKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF-- 177
++KG+++ + E D EK+ + T GK+ L Y L+IA G A+ F
Sbjct: 140 KEKGIEVIY-EDPVAGADFEKQTL-------TTDAGKQ---LKYGSLIIATGCTASRFPD 188
Query: 178 ----NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPT 233
+ PGV H+++EV A S+I +A KKI V+VGGG
Sbjct: 189 KIGGHLPGV----HYIREVADAD----SLIASLGKA----------KKI---VIVGGGYI 227
Query: 234 GVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN-MFDKRITASAEEKFKRDGI 292
G+E AAA + +D T I E D +L +F + EE ++++G+
Sbjct: 228 GMEVAAAAVAWNLD------------TTIVFPE--DQLLQRLFTPSLAQKYEELYRQNGV 273
Query: 293 DLKTGSMVVKL---SDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQAN 349
G+ + L SD +S A G S+I VV GIG +P I F +
Sbjct: 274 KFVKGASINNLEAGSDGRVSAVKLADG--STIEADTVV--IGIGAKPAIGPFETLAMNKS 329
Query: 350 RRVLATDEWLRVEGCESVYALGDCA 374
+ D R ++A+GD A
Sbjct: 330 IGGIQVDGLFRTS-TPGIFAIGDVA 353
>sp|O15770|GSHR_PLAF7 Glutathione reductase OS=Plasmodium falciparum (isolate 3D7) GN=GR3
PE=2 SV=4
Length = 500
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 227 VVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEK 286
+VG G VE + ID F R G+ IL FD+ + E
Sbjct: 181 IVGSGYIAVELINVIKRLGIDSYI--------FAR------GNRILRKFDESVINVLEND 226
Query: 287 FKRDGIDLKTGSMVV---KLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMK 343
K++ I++ T + VV K+SDK +S + G+I + V++ G ++ K
Sbjct: 227 MKKNNINIVTFADVVEIKKVSDKNLSIH-LSDGRIYE-HFDHVIYCVGRSPDTENLNLEK 284
Query: 344 QIGQANRRVLATDEWLRVEGCESVYALGDCATINQRKVMEDISAI 388
+ N + DE R ++YA+GDC + + K +ED++ +
Sbjct: 285 LNVETNNNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIEDLNLL 328
>sp|P37062|NAPE_ENTFA NADH peroxidase OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=npr PE=1 SV=2
Length = 447
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 127/300 (42%), Gaps = 55/300 (18%)
Query: 119 VRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178
+ +G+++ F E I ++ Q+ T +D G EE +YD L+I+ GA +
Sbjct: 66 MESRGVNV-FSNTEITAIQPKEHQV---TVKDLVSG--EERVENYDKLIISPGAVPFELD 119
Query: 179 TPGV-VEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEF 237
PG +++ + ++ + A ++++ +D ++ + VV+G G G+E
Sbjct: 120 IPGKDLDNIYLMRGRQWAIKLKQKTVD---------------PEVNNVVVIGSGYIGIEA 164
Query: 238 AAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMF-DKRITASAEEKFKRDGIDLKT 296
A A K ++T+++ D L ++ DK T E+ + + I + T
Sbjct: 165 AEAFA--------------KAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIAT 210
Query: 297 GSMVVKLSDKEISTKDRATGQISSI-----PYGMVVWSTGIGTRPVIMDFMKQIGQANRR 351
G V + G++ I Y + +G RP +
Sbjct: 211 GETVERY---------EGDGRVQKIVTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNG 261
Query: 352 VLATDEWLRVEGCESVYALGDCATINQRKVMEDIS-AIFSKADKNNTGKLNVKDLKEVVK 410
++ TDE++R + V+A+GD I +++ A+ + A K G+ VK+L+E VK
Sbjct: 262 LIKTDEYMRTSEPD-VFAVGDATLIKYNPADTEVNIALATNARKQ--GRFAVKNLEEPVK 318
>sp|P42454|RURE_ACIAD Rubredoxin-NAD(+) reductase OS=Acinetobacter sp. (strain ADP1)
GN=rubB PE=1 SV=2
Length = 393
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 136/332 (40%), Gaps = 62/332 (18%)
Query: 60 VVVLGTGWAGTTFLKILKSNSFEVQVV-----SPRNYFAFTPLLPSVTNGTVEARSIVEP 114
+V++G+G AG T + + + E ++V NY P L + +G I P
Sbjct: 4 IVIIGSGMAGYTLAREFRKLNPEHELVMICADDAVNYA--KPTLSNALSGNKAPEQI--P 59
Query: 115 IRNIVRKKGMDIQFKEAECYKIDAEK--KQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172
+ + + M Q K +I +E K I T E + +E Y LV+A+GA
Sbjct: 60 LGD---AEKMSTQLK----LQILSETWVKAINPETHELKLEKNGQETIQPYSKLVLAVGA 112
Query: 173 QANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGP 232
G + + S+ID RA NL+ + K++ V++G G
Sbjct: 113 NPTRLAIAG---------DGSDDIHVVNSLIDY--RAFRENLAKRQDKRV---VILGAGL 158
Query: 233 TGVEFAAAL----HDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFK 288
G EFA L H + DLS + R LL A HI + F K + S
Sbjct: 159 IGCEFANDLQHTGHQVTVIDLSP-----RPLGR--LLPA--HIADAFQKNLEES------ 203
Query: 289 RDGIDLKTGSMVVKLS---DKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI 345
GI + V K+S D + A GQ ++ +V+ + IG +P I D K
Sbjct: 204 --GIHFVLSTTVEKVSKINDGQDYAVTLANGQ--TLVADIVL--SAIGLQPNI-DLAKHA 256
Query: 346 GQANRRVLATDEWLRVEGCESVYALGDCATIN 377
G R + T+ L E +YA+GDCA +N
Sbjct: 257 GVHTSRGILTNSLLETN-LEDIYAIGDCAEVN 287
>sp|Q9PJI3|DLDH_CHLMU Dihydrolipoyl dehydrogenase OS=Chlamydia muridarum (strain MoPn /
Nigg) GN=lpdA PE=3 SV=1
Length = 465
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 225 FVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284
++GGG G EFA+ H + ++++EA IL + + I+ +
Sbjct: 176 MAIIGGGVIGCEFASLFHTL--------------GSEVSVIEASQQILALNNPDISKTMF 221
Query: 285 EKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ 344
+KF R GI G+ V + D + G I Y +V + T + +D
Sbjct: 222 DKFTRHGIRFMLGASVSSIEDMGDRVRLTINGNIEEYDYVLVSIGRRLNTENIGLDKAGV 281
Query: 345 IGQANRRVLATDEWLRVEGCESVYALGD 372
I R V+ TD +R ++YA+GD
Sbjct: 282 ICD-ERGVIPTDSTMRTN-VPNIYAIGD 307
>sp|Q94655|GSHR_PLAFK Glutathione reductase OS=Plasmodium falciparum (isolate K1 /
Thailand) GN=GR2 PE=1 SV=3
Length = 500
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 227 VVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEK 286
+VG G VE + ID F R G+ IL FD+ + E
Sbjct: 181 IVGSGYIAVELINVIKRLGIDSYI--------FAR------GNRILRKFDESVINVLEND 226
Query: 287 FKRDGIDLKTGSMVV---KLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMK 343
K++ I++ T + VV K+SDK +S + G+I + V++ G + K
Sbjct: 227 MKKNNINIVTFADVVEIKKVSDKNLSIH-LSDGRIYE-HFDHVIYCVGRSPDTENLKLEK 284
Query: 344 QIGQANRRVLATDEWLRVEGCESVYALGDCATINQRKVMEDISAI 388
+ N + DE R ++YA+GDC + + K +ED++ +
Sbjct: 285 LNVETNNNYIVVDENQRT-SVNNIYAVGDCCMVKKSKEIEDLNLL 328
>sp|Q93WJ8|MDAR4_ARATH Probable monodehydroascorbate reductase, cytoplasmic isoform 4
OS=Arabidopsis thaliana GN=At5g03630 PE=1 SV=1
Length = 435
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 47/227 (20%)
Query: 163 YDILVIAMGAQA---NTFNTPGV-VEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEE 218
Y L+ A G+ + F PG ++ +L+E+E A + ++ E
Sbjct: 116 YQTLLAATGSSVIRLSDFGVPGADAKNIFYLRELEDADYLAYAM---------------E 160
Query: 219 RKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKR 278
K+ VVVGGG G+E AAL + D++ +YP R +F
Sbjct: 161 TKEKGKAVVVGGGYIGLELGAALKANNL-DVTMVYPEPWCMPR------------LFTAG 207
Query: 279 ITASAEEKFKRDGIDLKTGSMVVKLSDK------EISTKDRATGQISSIPYGMVVWSTGI 332
I + E + GI++ G++ + E+ KD T + + G+
Sbjct: 208 IASFYEGYYANKGINIVKGTVASGFTTNSNGEVTEVKLKDGRTLEADIV-------IVGV 260
Query: 333 GTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCATINQR 379
G RP+I F Q+ + + L TD + + VYA+GD AT +
Sbjct: 261 GGRPIISLFKDQV-EEEKGGLKTDGFFKTS-LPDVYAIGDVATFPMK 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,906,736
Number of Sequences: 539616
Number of extensions: 9423863
Number of successful extensions: 30260
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 29874
Number of HSP's gapped (non-prelim): 367
length of query: 584
length of database: 191,569,459
effective HSP length: 123
effective length of query: 461
effective length of database: 125,196,691
effective search space: 57715674551
effective search space used: 57715674551
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)