Query 045826
Match_columns 584
No_of_seqs 410 out of 4134
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 09:56:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045826.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045826hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 7.9E-76 2.7E-80 638.6 39.5 435 54-583 39-500 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 2.3E-53 7.8E-58 454.8 20.2 395 58-582 3-423 (430)
3 3sx6_A Sulfide-quinone reducta 100.0 6.7E-43 2.3E-47 374.7 29.0 374 57-561 4-405 (437)
4 3vrd_B FCCB subunit, flavocyto 100.0 2.1E-41 7.2E-46 359.0 24.9 277 57-375 2-297 (401)
5 3h28_A Sulfide-quinone reducta 100.0 8.1E-41 2.8E-45 357.8 27.2 378 57-569 2-401 (430)
6 3klj_A NAD(FAD)-dependent dehy 100.0 5.6E-41 1.9E-45 353.1 24.0 260 55-376 7-269 (385)
7 4eqs_A Coenzyme A disulfide re 100.0 1.4E-40 4.9E-45 356.1 26.8 274 58-377 1-281 (437)
8 1xhc_A NADH oxidase /nitrite r 100.0 6.7E-40 2.3E-44 343.0 30.6 263 57-376 8-272 (367)
9 3h8l_A NADH oxidase; membrane 100.0 1.7E-39 5.7E-44 345.3 26.1 280 57-376 1-311 (409)
10 3ef6_A Toluene 1,2-dioxygenase 100.0 1.3E-38 4.5E-43 338.4 27.5 268 57-377 2-280 (410)
11 3lxd_A FAD-dependent pyridine 100.0 4.8E-38 1.6E-42 334.7 30.8 274 56-377 8-290 (415)
12 3fg2_P Putative rubredoxin red 100.0 6.9E-38 2.4E-42 332.3 29.7 272 57-377 1-280 (404)
13 2gqw_A Ferredoxin reductase; f 100.0 7.2E-38 2.5E-42 332.4 24.4 265 56-377 6-278 (408)
14 3ics_A Coenzyme A-disulfide re 100.0 6.9E-37 2.3E-41 340.2 30.2 282 52-377 31-323 (588)
15 3ntd_A FAD-dependent pyridine 100.0 1.2E-36 4.1E-41 336.8 31.5 279 57-377 1-308 (565)
16 3iwa_A FAD-dependent pyridine 100.0 5.9E-37 2E-41 331.7 26.9 279 57-377 3-299 (472)
17 1q1r_A Putidaredoxin reductase 100.0 1.8E-36 6.3E-41 323.8 26.9 272 57-377 4-289 (431)
18 2cdu_A NADPH oxidase; flavoenz 100.0 2E-36 6.7E-41 325.9 26.6 276 58-377 1-287 (452)
19 2bc0_A NADH oxidase; flavoprot 100.0 1.4E-36 4.7E-41 330.2 24.6 275 57-377 35-331 (490)
20 3kd9_A Coenzyme A disulfide re 100.0 3.5E-36 1.2E-40 323.6 25.6 274 56-377 2-285 (449)
21 3cgb_A Pyridine nucleotide-dis 100.0 1.3E-35 4.5E-40 321.7 27.3 278 57-377 36-323 (480)
22 2v3a_A Rubredoxin reductase; a 100.0 1.4E-35 4.9E-40 312.4 26.3 268 57-376 4-281 (384)
23 3oc4_A Oxidoreductase, pyridin 100.0 3.3E-36 1.1E-40 324.0 21.3 273 58-377 3-284 (452)
24 1nhp_A NADH peroxidase; oxidor 100.0 2.2E-35 7.5E-40 317.2 25.1 277 58-377 1-286 (447)
25 2zbw_A Thioredoxin reductase; 100.0 5.7E-35 1.9E-39 301.5 23.7 269 57-376 5-291 (335)
26 1zmd_A Dihydrolipoyl dehydroge 100.0 2.6E-35 9E-40 319.0 20.6 269 56-375 5-323 (474)
27 3f8d_A Thioredoxin reductase ( 100.0 1.1E-34 3.9E-39 296.8 24.3 263 57-376 15-291 (323)
28 2qae_A Lipoamide, dihydrolipoy 100.0 6E-35 2.1E-39 315.6 22.6 270 57-375 2-317 (468)
29 3l8k_A Dihydrolipoyl dehydroge 100.0 2.7E-35 9.1E-40 318.2 19.5 267 57-375 4-311 (466)
30 1m6i_A Programmed cell death p 100.0 1.1E-34 3.7E-39 315.2 23.4 278 55-377 9-323 (493)
31 1mo9_A ORF3; nucleotide bindin 100.0 2.1E-34 7.3E-39 315.3 25.4 267 55-375 41-356 (523)
32 2a8x_A Dihydrolipoyl dehydroge 100.0 6.5E-35 2.2E-39 315.1 19.9 268 57-375 3-312 (464)
33 1ebd_A E3BD, dihydrolipoamide 100.0 6.3E-35 2.2E-39 314.4 19.7 267 57-375 3-311 (455)
34 3urh_A Dihydrolipoyl dehydroge 100.0 1.5E-34 5.1E-39 314.4 22.4 273 54-375 22-341 (491)
35 1dxl_A Dihydrolipoamide dehydr 100.0 7.5E-35 2.6E-39 315.1 20.0 271 56-375 5-320 (470)
36 2wpf_A Trypanothione reductase 100.0 2E-34 6.7E-39 313.4 22.7 272 57-375 7-333 (495)
37 1fec_A Trypanothione reductase 100.0 5.5E-34 1.9E-38 309.6 24.9 272 57-375 3-329 (490)
38 2q7v_A Thioredoxin reductase; 100.0 7E-34 2.4E-38 292.2 24.3 263 56-375 7-287 (325)
39 1zk7_A HGII, reductase, mercur 100.0 7.4E-34 2.5E-38 307.0 25.6 265 56-375 3-312 (467)
40 1ges_A Glutathione reductase; 100.0 1.8E-34 6.2E-39 310.2 20.3 259 57-375 4-306 (450)
41 1onf_A GR, grase, glutathione 100.0 3.2E-34 1.1E-38 312.3 21.1 271 57-376 2-316 (500)
42 3qfa_A Thioredoxin reductase 1 100.0 6.6E-34 2.3E-38 311.0 23.1 270 55-375 30-357 (519)
43 3r9u_A Thioredoxin reductase; 100.0 4.6E-34 1.6E-38 291.5 20.3 262 56-375 3-287 (315)
44 1v59_A Dihydrolipoamide dehydr 100.0 5E-34 1.7E-38 309.3 21.3 270 57-375 5-328 (478)
45 1ojt_A Surface protein; redox- 100.0 7.3E-34 2.5E-38 308.2 22.5 272 57-375 6-327 (482)
46 3lzw_A Ferredoxin--NADP reduct 100.0 1.1E-33 3.9E-38 290.7 22.8 262 57-376 7-289 (332)
47 2hqm_A GR, grase, glutathione 100.0 2.7E-34 9.2E-39 311.3 18.9 264 56-375 10-325 (479)
48 3itj_A Thioredoxin reductase 1 100.0 3.5E-34 1.2E-38 295.3 18.7 274 53-375 18-310 (338)
49 3dk9_A Grase, GR, glutathione 100.0 1.5E-33 5E-38 305.6 23.9 266 55-375 18-334 (478)
50 2eq6_A Pyruvate dehydrogenase 100.0 6.9E-34 2.4E-38 306.8 21.2 263 57-375 6-312 (464)
51 3fbs_A Oxidoreductase; structu 100.0 4.4E-34 1.5E-38 289.1 18.3 258 57-375 2-268 (297)
52 2q0l_A TRXR, thioredoxin reduc 100.0 1.5E-33 5E-38 287.8 22.1 264 57-375 1-284 (311)
53 3dgz_A Thioredoxin reductase 2 100.0 1.3E-33 4.4E-38 306.7 23.0 269 56-375 5-329 (488)
54 3cty_A Thioredoxin reductase; 100.0 2.4E-33 8.3E-38 287.5 23.6 263 57-375 16-291 (319)
55 4gcm_A TRXR, thioredoxin reduc 100.0 2.4E-33 8.3E-38 286.6 23.3 264 57-375 6-281 (312)
56 3ab1_A Ferredoxin--NADP reduct 100.0 9.8E-34 3.3E-38 295.5 20.5 266 56-376 13-302 (360)
57 1trb_A Thioredoxin reductase; 100.0 1.4E-33 4.9E-38 288.9 20.7 267 56-375 4-289 (320)
58 2r9z_A Glutathione amide reduc 100.0 1.1E-33 3.8E-38 305.1 20.8 260 57-375 4-305 (463)
59 1fl2_A Alkyl hydroperoxide red 100.0 4.3E-33 1.5E-37 284.2 23.3 261 58-376 2-281 (310)
60 1xdi_A RV3303C-LPDA; reductase 100.0 8.7E-34 3E-38 309.0 18.7 268 57-375 2-320 (499)
61 1lvl_A Dihydrolipoamide dehydr 100.0 1.4E-33 4.7E-38 304.0 19.4 261 56-375 4-308 (458)
62 3dgh_A TRXR-1, thioredoxin red 100.0 8.6E-33 2.9E-37 299.9 24.0 267 56-375 8-329 (483)
63 4dna_A Probable glutathione re 100.0 5.2E-33 1.8E-37 300.0 20.1 260 57-375 5-309 (463)
64 4b1b_A TRXR, thioredoxin reduc 100.0 2E-32 6.8E-37 298.5 24.1 267 57-375 42-361 (542)
65 2yqu_A 2-oxoglutarate dehydrog 100.0 2.8E-33 9.5E-38 301.5 17.0 263 58-375 2-305 (455)
66 4a5l_A Thioredoxin reductase; 100.0 1.1E-32 3.6E-37 281.7 19.8 270 56-376 3-288 (314)
67 2a87_A TRXR, TR, thioredoxin r 100.0 1.2E-32 4E-37 284.5 19.6 266 55-375 12-291 (335)
68 3lad_A Dihydrolipoamide dehydr 100.0 2.8E-32 9.4E-37 295.4 23.4 268 56-375 2-321 (476)
69 3o0h_A Glutathione reductase; 100.0 9.9E-33 3.4E-37 299.5 19.8 260 57-375 26-329 (484)
70 1vdc_A NTR, NADPH dependent th 100.0 1.3E-32 4.4E-37 283.6 17.7 270 57-375 8-298 (333)
71 3ic9_A Dihydrolipoamide dehydr 100.0 1.3E-32 4.3E-37 299.0 17.2 264 57-375 8-316 (492)
72 2x8g_A Thioredoxin glutathione 100.0 5E-32 1.7E-36 301.6 21.1 270 55-375 105-436 (598)
73 4a9w_A Monooxygenase; baeyer-v 100.0 5.5E-32 1.9E-36 280.7 20.0 263 57-373 3-323 (357)
74 1hyu_A AHPF, alkyl hydroperoxi 100.0 4E-31 1.4E-35 289.0 24.3 265 55-376 210-492 (521)
75 4fk1_A Putative thioredoxin re 100.0 9.3E-32 3.2E-36 274.0 17.3 262 53-375 2-275 (304)
76 3d1c_A Flavin-containing putat 100.0 8.2E-31 2.8E-35 273.9 24.7 265 57-376 4-312 (369)
77 2vdc_G Glutamate synthase [NAD 100.0 8.8E-32 3E-36 288.6 16.8 275 55-375 120-420 (456)
78 3k30_A Histamine dehydrogenase 100.0 6.5E-31 2.2E-35 296.8 15.7 290 16-375 345-652 (690)
79 1o94_A Tmadh, trimethylamine d 100.0 1.4E-30 4.8E-35 295.3 15.7 295 16-375 342-677 (729)
80 1lqt_A FPRA; NADP+ derivative, 100.0 1.5E-30 5E-35 279.5 14.1 285 56-375 2-362 (456)
81 3s5w_A L-ornithine 5-monooxyge 100.0 4.2E-29 1.4E-33 269.4 22.0 282 57-375 30-420 (463)
82 1cjc_A Protein (adrenodoxin re 100.0 2.3E-29 8E-34 270.4 14.7 285 56-375 5-370 (460)
83 2xve_A Flavin-containing monoo 100.0 2.7E-28 9.4E-33 262.8 22.0 252 58-375 3-318 (464)
84 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.1E-28 3.7E-33 277.9 18.3 272 38-375 353-651 (671)
85 1gte_A Dihydropyrimidine dehyd 100.0 1.5E-28 5.3E-33 287.8 18.4 276 56-375 186-484 (1025)
86 3gwf_A Cyclohexanone monooxyge 99.9 5.6E-28 1.9E-32 264.5 15.2 268 56-375 7-433 (540)
87 2gag_A Heterotetrameric sarcos 99.9 1.7E-27 6E-32 277.1 17.6 268 57-375 128-421 (965)
88 2gv8_A Monooxygenase; FMO, FAD 99.9 3.8E-27 1.3E-31 253.0 14.6 258 56-375 5-339 (447)
89 3uox_A Otemo; baeyer-villiger 99.9 7.1E-27 2.4E-31 256.0 12.4 178 56-271 8-220 (545)
90 4ap3_A Steroid monooxygenase; 99.9 3.5E-26 1.2E-30 250.8 15.6 175 56-274 20-230 (549)
91 1y56_A Hypothetical protein PH 99.9 5.9E-26 2E-30 246.5 14.1 238 57-375 108-354 (493)
92 1w4x_A Phenylacetone monooxyge 99.9 1.2E-24 4.1E-29 239.0 17.3 174 56-271 15-221 (542)
93 2ywl_A Thioredoxin reductase r 99.8 6.7E-20 2.3E-24 171.3 18.2 126 224-375 3-146 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 1.9E-18 6.6E-23 187.6 24.0 283 54-373 36-457 (501)
95 2cul_A Glucose-inhibited divis 99.5 1.7E-13 5.9E-18 133.2 15.3 94 224-334 5-125 (232)
96 2e5v_A L-aspartate oxidase; ar 99.5 1.9E-14 6.6E-19 154.9 6.0 257 59-375 1-340 (472)
97 3fpz_A Thiazole biosynthetic e 99.4 1E-15 3.5E-20 156.9 -12.2 226 57-375 65-294 (326)
98 2gqf_A Hypothetical protein HI 99.3 4E-12 1.4E-16 133.9 9.2 109 57-175 4-169 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.6E-09 5.5E-14 114.8 14.3 92 278-375 205-307 (431)
100 2ywl_A Thioredoxin reductase r 99.0 9.6E-10 3.3E-14 101.9 8.9 106 57-174 1-110 (180)
101 1rp0_A ARA6, thiazole biosynth 99.0 2.1E-09 7.3E-14 107.5 11.2 138 224-375 41-244 (284)
102 2cul_A Glucose-inhibited divis 98.9 9.3E-10 3.2E-14 106.7 7.4 117 57-183 3-134 (232)
103 3ces_A MNMG, tRNA uridine 5-ca 98.8 3.9E-09 1.3E-13 115.8 8.1 117 57-183 28-190 (651)
104 4dgk_A Phytoene dehydrogenase; 98.8 7.7E-09 2.6E-13 111.8 10.3 53 277-331 221-275 (501)
105 3alj_A 2-methyl-3-hydroxypyrid 98.7 2E-08 6.7E-13 104.7 9.4 108 55-174 9-160 (379)
106 3ka7_A Oxidoreductase; structu 98.7 5E-07 1.7E-11 95.3 19.1 69 58-126 1-76 (425)
107 2zxi_A TRNA uridine 5-carboxym 98.7 1.5E-08 5.1E-13 110.8 7.2 117 57-183 27-189 (637)
108 3nrn_A Uncharacterized protein 98.7 9.4E-08 3.2E-12 100.9 12.6 52 276-332 188-241 (421)
109 3v76_A Flavoprotein; structura 98.6 2.9E-08 1E-12 104.7 7.4 109 56-174 26-187 (417)
110 3dme_A Conserved exported prot 98.6 1.4E-06 4.6E-11 89.6 19.9 65 276-345 149-216 (369)
111 2bry_A NEDD9 interacting prote 98.6 5.1E-08 1.8E-12 105.3 9.4 121 55-182 90-238 (497)
112 2gag_B Heterotetrameric sarcos 98.6 1.7E-06 5.8E-11 90.4 20.4 55 276-333 173-229 (405)
113 1rp0_A ARA6, thiazole biosynth 98.6 9.8E-08 3.3E-12 95.3 10.0 118 57-176 39-193 (284)
114 2gf3_A MSOX, monomeric sarcosi 98.6 6.7E-07 2.3E-11 93.0 15.3 76 252-333 126-204 (389)
115 2bry_A NEDD9 interacting prote 98.6 2.2E-08 7.7E-13 108.2 4.0 154 162-335 37-231 (497)
116 3i3l_A Alkylhalidase CMLS; fla 98.5 1.5E-06 5.2E-11 95.6 17.5 38 54-91 20-57 (591)
117 1ryi_A Glycine oxidase; flavop 98.5 6.5E-08 2.2E-12 100.5 6.2 39 53-91 13-51 (382)
118 3nlc_A Uncharacterized protein 98.5 2.3E-07 8E-12 100.8 9.3 37 55-91 105-141 (549)
119 3cp8_A TRNA uridine 5-carboxym 98.5 2.1E-07 7.1E-12 102.2 8.4 116 56-181 20-181 (641)
120 3rp8_A Flavoprotein monooxygen 98.4 3.5E-07 1.2E-11 96.0 9.0 41 52-92 18-58 (407)
121 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 3.4E-07 1.2E-11 93.7 8.5 38 57-94 1-41 (342)
122 3oz2_A Digeranylgeranylglycero 98.4 2.5E-07 8.5E-12 96.1 7.5 39 55-93 2-40 (397)
123 2i0z_A NAD(FAD)-utilizing dehy 98.4 3.6E-07 1.2E-11 97.3 8.8 36 57-92 26-61 (447)
124 3nyc_A D-arginine dehydrogenas 98.4 2E-07 6.7E-12 96.6 6.4 37 55-92 7-43 (381)
125 3dje_A Fructosyl amine: oxygen 98.4 2.4E-06 8.2E-11 90.5 14.7 58 276-335 160-222 (438)
126 3pvc_A TRNA 5-methylaminomethy 98.4 4.1E-06 1.4E-10 94.1 17.2 57 276-335 411-470 (689)
127 2x3n_A Probable FAD-dependent 98.4 3E-07 1E-11 96.2 6.8 36 57-92 6-41 (399)
128 3nks_A Protoporphyrinogen oxid 98.4 8.4E-07 2.9E-11 95.1 10.3 42 57-98 2-45 (477)
129 1yvv_A Amine oxidase, flavin-c 98.4 6.8E-07 2.3E-11 90.9 8.6 36 57-92 2-37 (336)
130 3pl8_A Pyranose 2-oxidase; sub 98.4 1.1E-07 3.7E-12 105.5 2.8 38 57-94 46-83 (623)
131 3ps9_A TRNA 5-methylaminomethy 98.4 1.1E-06 3.7E-11 98.7 10.9 37 56-92 271-307 (676)
132 3nix_A Flavoprotein/dehydrogen 98.4 9.7E-07 3.3E-11 92.9 9.9 35 57-91 5-39 (421)
133 1y56_B Sarcosine oxidase; dehy 98.4 7.4E-07 2.5E-11 92.5 8.8 34 57-90 5-38 (382)
134 2yqu_A 2-oxoglutarate dehydrog 98.3 9.2E-07 3.2E-11 94.4 9.6 102 57-178 167-268 (455)
135 3cgv_A Geranylgeranyl reductas 98.3 5.3E-07 1.8E-11 93.9 7.2 113 56-174 3-162 (397)
136 1y0p_A Fumarate reductase flav 98.3 1.6E-06 5.5E-11 95.3 11.2 38 57-94 126-163 (571)
137 2xdo_A TETX2 protein; tetracyc 98.3 1.1E-06 3.7E-11 92.0 8.7 37 56-92 25-61 (398)
138 3da1_A Glycerol-3-phosphate de 98.3 4.8E-06 1.6E-10 91.2 14.1 57 276-332 169-230 (561)
139 3fmw_A Oxygenase; mithramycin, 98.3 8E-07 2.7E-11 97.5 7.7 111 56-174 48-207 (570)
140 2vou_A 2,6-dihydroxypyridine h 98.3 2E-06 7E-11 89.9 10.5 36 56-91 4-39 (397)
141 2uzz_A N-methyl-L-tryptophan o 98.3 5.2E-07 1.8E-11 93.3 5.7 35 57-91 2-36 (372)
142 3ihg_A RDME; flavoenzyme, anth 98.3 1.8E-06 6.2E-11 94.1 10.2 36 57-92 5-40 (535)
143 2qa1_A PGAE, polyketide oxygen 98.3 2.1E-06 7.3E-11 92.6 10.4 115 54-174 8-165 (500)
144 2v3a_A Rubredoxin reductase; a 98.3 2.4E-06 8.3E-11 88.9 10.3 101 57-176 145-245 (384)
145 2eq6_A Pyruvate dehydrogenase 98.3 2.5E-06 8.7E-11 91.2 10.6 107 57-178 169-275 (464)
146 1qo8_A Flavocytochrome C3 fuma 98.3 2E-06 6.8E-11 94.4 9.9 39 56-94 120-158 (566)
147 2oln_A NIKD protein; flavoprot 98.3 1.2E-06 4.2E-11 91.5 7.8 35 57-91 4-38 (397)
148 3e1t_A Halogenase; flavoprotei 98.3 1.9E-06 6.6E-11 93.4 9.6 34 57-90 7-40 (512)
149 1ebd_A E3BD, dihydrolipoamide 98.3 2.8E-06 9.5E-11 90.6 10.6 105 57-178 170-274 (455)
150 2gqw_A Ferredoxin reductase; f 98.2 2.5E-06 8.5E-11 89.7 9.9 97 57-176 145-241 (408)
151 3kkj_A Amine oxidase, flavin-c 98.2 4.7E-07 1.6E-11 87.9 3.9 40 57-96 2-41 (336)
152 3atr_A Conserved archaeal prot 98.2 2.7E-06 9.1E-11 90.7 9.9 112 57-175 6-163 (453)
153 1nhp_A NADH peroxidase; oxidor 98.2 2.3E-06 7.8E-11 91.1 9.0 100 56-178 148-250 (447)
154 1lvl_A Dihydrolipoamide dehydr 98.2 1.8E-06 6E-11 92.3 7.8 102 57-178 171-272 (458)
155 2qa2_A CABE, polyketide oxygen 98.2 3.1E-06 1.1E-10 91.3 9.8 113 56-174 11-166 (499)
156 4a9w_A Monooxygenase; baeyer-v 98.2 5.9E-06 2E-10 84.3 11.3 95 224-336 5-134 (357)
157 3axb_A Putative oxidoreductase 98.2 3.8E-06 1.3E-10 89.2 9.4 37 56-92 22-59 (448)
158 1pj5_A N,N-dimethylglycine oxi 98.2 3.9E-05 1.3E-09 88.1 18.3 55 276-333 150-206 (830)
159 1k0i_A P-hydroxybenzoate hydro 98.2 1.9E-06 6.5E-11 89.9 6.8 35 57-91 2-36 (394)
160 3ef6_A Toluene 1,2-dioxygenase 98.2 2.6E-06 9E-11 89.5 7.7 99 57-176 143-243 (410)
161 3lxd_A FAD-dependent pyridine 98.2 5.7E-06 1.9E-10 87.1 10.3 99 57-176 152-253 (415)
162 4eqs_A Coenzyme A disulfide re 98.2 5.5E-06 1.9E-10 87.8 10.3 97 57-177 147-243 (437)
163 1v59_A Dihydrolipoamide dehydr 98.1 7.3E-06 2.5E-10 87.9 11.0 104 57-177 183-290 (478)
164 1zmd_A Dihydrolipoyl dehydroge 98.1 5.5E-06 1.9E-10 88.8 9.9 107 57-177 178-285 (474)
165 3lzw_A Ferredoxin--NADP reduct 98.1 4.4E-06 1.5E-10 84.5 8.5 92 223-332 8-121 (332)
166 3c96_A Flavin-containing monoo 98.1 4.4E-06 1.5E-10 87.7 8.7 36 57-92 4-40 (410)
167 3alj_A 2-methyl-3-hydroxypyrid 98.1 1.9E-05 6.5E-10 81.8 13.5 98 223-340 12-164 (379)
168 1ges_A Glutathione reductase; 98.1 4.3E-06 1.5E-10 89.0 8.8 99 57-177 167-268 (450)
169 2wdq_A Succinate dehydrogenase 98.1 3.9E-05 1.3E-09 84.4 16.5 57 276-332 142-204 (588)
170 2dkh_A 3-hydroxybenzoate hydro 98.1 3E-05 1E-09 86.3 15.4 38 56-93 31-69 (639)
171 3nlc_A Uncharacterized protein 98.1 1.1E-05 3.8E-10 87.6 11.5 108 223-347 108-289 (549)
172 2xve_A Flavin-containing monoo 98.1 1.4E-05 4.9E-10 85.3 12.1 104 223-337 3-169 (464)
173 3hyw_A Sulfide-quinone reducta 98.1 1.6E-06 5.3E-11 91.9 4.3 95 223-333 3-108 (430)
174 3fbs_A Oxidoreductase; structu 98.1 7.5E-06 2.6E-10 81.3 9.1 90 56-177 140-229 (297)
175 3itj_A Thioredoxin reductase 1 98.1 1E-05 3.4E-10 82.1 10.1 97 220-333 20-141 (338)
176 2a8x_A Dihydrolipoyl dehydroge 98.1 6.7E-06 2.3E-10 87.9 9.1 105 57-178 171-275 (464)
177 1onf_A GR, grase, glutathione 98.1 9.2E-06 3.1E-10 87.7 10.3 99 57-177 176-278 (500)
178 2gmh_A Electron transfer flavo 98.1 5.2E-06 1.8E-10 91.3 8.4 38 56-93 34-77 (584)
179 4b1b_A TRXR, thioredoxin reduc 98.1 6.4E-06 2.2E-10 89.5 8.9 102 56-178 222-323 (542)
180 1dxl_A Dihydrolipoamide dehydr 98.1 5.1E-06 1.7E-10 88.9 8.0 106 56-178 176-283 (470)
181 3v76_A Flavoprotein; structura 98.1 1.3E-05 4.6E-10 84.3 11.0 95 224-336 29-189 (417)
182 1xhc_A NADH oxidase /nitrite r 98.1 4.4E-06 1.5E-10 86.5 7.0 92 58-176 144-236 (367)
183 1d4d_A Flavocytochrome C fumar 98.1 1.6E-05 5.6E-10 87.2 11.9 39 56-94 125-163 (572)
184 3c4n_A Uncharacterized protein 98.1 2E-06 6.8E-11 90.3 4.4 34 57-90 36-71 (405)
185 4at0_A 3-ketosteroid-delta4-5a 98.1 1.4E-05 4.6E-10 86.6 11.1 38 56-93 40-77 (510)
186 3vrd_B FCCB subunit, flavocyto 98.1 3.9E-06 1.3E-10 87.8 6.6 97 222-334 2-108 (401)
187 2bc0_A NADH oxidase; flavoprot 98.1 9.2E-06 3.1E-10 87.5 9.7 100 56-177 193-294 (490)
188 3fg2_P Putative rubredoxin red 98.1 7.9E-06 2.7E-10 85.6 9.0 99 57-176 142-243 (404)
189 2qcu_A Aerobic glycerol-3-phos 98.0 9E-06 3.1E-10 87.8 9.5 34 57-90 3-36 (501)
190 1q1r_A Putidaredoxin reductase 98.0 9.4E-06 3.2E-10 85.9 9.4 99 57-176 149-252 (431)
191 3cgb_A Pyridine nucleotide-dis 98.0 7.1E-06 2.4E-10 88.1 8.6 101 56-177 185-285 (480)
192 1ojt_A Surface protein; redox- 98.0 5E-06 1.7E-10 89.4 7.1 102 57-177 185-289 (482)
193 2zbw_A Thioredoxin reductase; 98.0 1.6E-05 5.6E-10 80.6 10.7 93 223-332 6-119 (335)
194 3ics_A Coenzyme A-disulfide re 98.0 8.2E-06 2.8E-10 89.9 9.0 98 57-176 187-284 (588)
195 3oc4_A Oxidoreductase, pyridin 98.0 1.6E-05 5.4E-10 84.7 10.8 103 57-179 147-249 (452)
196 3f8d_A Thioredoxin reductase ( 98.0 1.7E-05 6E-10 79.6 10.6 93 223-333 16-124 (323)
197 2cdu_A NADPH oxidase; flavoenz 98.0 1.4E-05 4.9E-10 85.0 10.4 101 57-177 149-250 (452)
198 2r9z_A Glutathione amide reduc 98.0 1.1E-05 3.8E-10 86.2 9.5 102 57-177 166-267 (463)
199 2aqj_A Tryptophan halogenase, 98.0 1.2E-05 4E-10 87.7 9.8 35 56-90 4-41 (538)
200 2hqm_A GR, grase, glutathione 98.0 8E-06 2.7E-10 87.7 8.3 99 57-176 185-287 (479)
201 3h8l_A NADH oxidase; membrane 98.0 5.5E-06 1.9E-10 86.9 6.9 99 223-334 2-113 (409)
202 3jsk_A Cypbp37 protein; octame 98.0 1.2E-05 3.9E-10 81.8 8.9 37 57-93 79-117 (344)
203 2qae_A Lipoamide, dihydrolipoy 98.0 1.1E-05 3.6E-10 86.4 9.1 104 56-177 173-279 (468)
204 3d1c_A Flavin-containing putat 98.0 2.2E-05 7.4E-10 80.8 11.1 94 224-336 6-145 (369)
205 3sx6_A Sulfide-quinone reducta 98.0 7.9E-06 2.7E-10 86.6 7.8 96 223-333 5-111 (437)
206 2wpf_A Trypanothione reductase 98.0 1E-05 3.5E-10 87.2 8.8 99 57-177 191-295 (495)
207 3ab1_A Ferredoxin--NADP reduct 98.0 2.3E-05 7.8E-10 80.5 10.8 93 223-332 15-129 (360)
208 1trb_A Thioredoxin reductase; 98.0 1.5E-05 5.3E-10 80.2 9.3 102 57-177 145-250 (320)
209 1fec_A Trypanothione reductase 98.0 9.9E-06 3.4E-10 87.2 8.1 99 57-177 187-291 (490)
210 1fl2_A Alkyl hydroperoxide red 98.0 3.2E-05 1.1E-09 77.4 11.4 96 57-176 144-244 (310)
211 1xdi_A RV3303C-LPDA; reductase 98.0 1.1E-05 3.7E-10 87.1 8.2 101 57-177 182-282 (499)
212 1kf6_A Fumarate reductase flav 98.0 9.5E-05 3.2E-09 81.5 15.8 57 276-332 133-195 (602)
213 3lad_A Dihydrolipoamide dehydr 98.0 2.3E-05 7.8E-10 84.0 10.4 103 56-177 179-283 (476)
214 3klj_A NAD(FAD)-dependent dehy 97.9 1.1E-05 3.6E-10 84.1 7.5 94 223-333 10-115 (385)
215 1zk7_A HGII, reductase, mercur 97.9 1.5E-05 5.1E-10 85.2 8.8 99 57-177 176-274 (467)
216 1chu_A Protein (L-aspartate ox 97.9 6.9E-05 2.4E-09 81.5 14.1 36 57-93 8-43 (540)
217 3cty_A Thioredoxin reductase; 97.9 5.1E-05 1.7E-09 76.4 12.2 98 57-177 155-255 (319)
218 2bs2_A Quinol-fumarate reducta 97.9 0.00011 3.7E-09 81.7 15.8 57 277-333 158-219 (660)
219 2h88_A Succinate dehydrogenase 97.9 9E-05 3.1E-09 81.8 15.0 58 276-333 154-216 (621)
220 3urh_A Dihydrolipoyl dehydroge 97.9 2.1E-05 7.1E-10 84.7 9.7 106 56-178 197-304 (491)
221 3ic9_A Dihydrolipoamide dehydr 97.9 1.5E-05 5.2E-10 85.8 8.6 105 57-178 174-278 (492)
222 3ntd_A FAD-dependent pyridine 97.9 2.5E-05 8.7E-10 85.5 10.4 100 57-176 151-269 (565)
223 2rgh_A Alpha-glycerophosphate 97.9 0.00016 5.5E-09 79.2 16.6 57 276-332 187-248 (571)
224 3kd9_A Coenzyme A disulfide re 97.9 2.6E-05 9E-10 82.9 9.9 97 223-333 4-113 (449)
225 3iwa_A FAD-dependent pyridine 97.9 2.1E-05 7.2E-10 84.2 8.9 99 57-176 159-260 (472)
226 2gqf_A Hypothetical protein HI 97.9 5.1E-05 1.8E-09 79.4 11.6 95 224-336 6-170 (401)
227 3r9u_A Thioredoxin reductase; 97.9 5.6E-05 1.9E-09 75.6 11.4 92 223-333 5-117 (315)
228 2vdc_G Glutamate synthase [NAD 97.9 1.5E-05 5.1E-10 84.9 7.4 90 220-333 120-218 (456)
229 1vdc_A NTR, NADPH dependent th 97.9 6E-05 2E-09 76.3 11.4 98 56-177 158-262 (333)
230 3dgh_A TRXR-1, thioredoxin red 97.9 4.6E-05 1.6E-09 81.8 11.1 104 56-177 186-292 (483)
231 3gyx_A Adenylylsulfate reducta 97.9 0.00011 3.8E-09 81.6 14.4 35 57-91 22-62 (662)
232 3o0h_A Glutathione reductase; 97.9 2.4E-05 8.2E-10 84.1 8.7 103 56-178 190-292 (484)
233 1mo9_A ORF3; nucleotide bindin 97.9 3.8E-05 1.3E-09 83.4 10.0 101 58-177 215-319 (523)
234 2q7v_A Thioredoxin reductase; 97.8 6.5E-05 2.2E-09 75.8 11.1 93 223-333 9-122 (325)
235 2pyx_A Tryptophan halogenase; 97.8 4E-05 1.4E-09 83.2 10.1 34 57-90 7-52 (526)
236 2r0c_A REBC; flavin adenine di 97.8 3.6E-05 1.2E-09 84.0 9.7 36 57-92 26-61 (549)
237 2q0l_A TRXR, thioredoxin reduc 97.8 9.7E-05 3.3E-09 73.9 12.2 92 224-333 3-113 (311)
238 1m6i_A Programmed cell death p 97.8 2.8E-05 9.7E-10 83.7 8.7 102 57-177 180-285 (493)
239 2a87_A TRXR, TR, thioredoxin r 97.8 7.1E-05 2.4E-09 76.0 11.3 98 57-178 155-256 (335)
240 2gv8_A Monooxygenase; FMO, FAD 97.8 4.2E-05 1.4E-09 81.2 9.3 85 56-178 211-296 (447)
241 3dk9_A Grase, GR, glutathione 97.8 4.5E-05 1.5E-09 81.7 9.5 106 57-177 187-296 (478)
242 2e4g_A Tryptophan halogenase; 97.8 5.2E-05 1.8E-09 82.8 10.0 35 56-90 24-61 (550)
243 3dgz_A Thioredoxin reductase 2 97.8 6.8E-05 2.3E-09 80.6 10.6 105 56-178 184-291 (488)
244 2e1m_A L-glutamate oxidase; L- 97.8 5.3E-05 1.8E-09 78.2 9.0 72 55-126 42-129 (376)
245 3qfa_A Thioredoxin reductase 1 97.8 8.6E-05 2.9E-09 80.4 11.1 104 57-178 210-319 (519)
246 4gde_A UDP-galactopyranose mut 97.8 1.1E-05 3.7E-10 87.1 4.0 41 56-96 9-50 (513)
247 4ap3_A Steroid monooxygenase; 97.8 6.3E-05 2.2E-09 82.0 10.0 94 223-333 22-158 (549)
248 2weu_A Tryptophan 5-halogenase 97.8 4.7E-05 1.6E-09 82.3 8.9 34 57-90 2-38 (511)
249 2i0z_A NAD(FAD)-utilizing dehy 97.8 0.00012 4E-09 77.8 11.7 97 224-336 28-193 (447)
250 3gwf_A Cyclohexanone monooxyge 97.8 7.7E-05 2.6E-09 81.1 10.4 97 223-336 9-149 (540)
251 3h28_A Sulfide-quinone reducta 97.7 1.5E-05 5.1E-10 84.3 4.5 95 223-333 3-108 (430)
252 2x3n_A Probable FAD-dependent 97.7 7.9E-05 2.7E-09 77.7 10.0 92 224-332 8-164 (399)
253 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00015 5E-09 78.7 12.1 95 222-333 212-325 (521)
254 2gjc_A Thiazole biosynthetic e 97.7 5.6E-05 1.9E-09 76.3 7.8 37 58-94 66-104 (326)
255 3uox_A Otemo; baeyer-villiger 97.7 8.3E-05 2.8E-09 81.0 9.8 97 223-336 10-149 (545)
256 4dna_A Probable glutathione re 97.7 7E-05 2.4E-09 79.9 9.0 102 56-178 169-272 (463)
257 1s3e_A Amine oxidase [flavin-c 97.7 6.3E-05 2.2E-09 81.5 8.7 70 57-126 4-79 (520)
258 2b9w_A Putative aminooxidase; 97.7 5.3E-05 1.8E-09 79.6 7.8 70 56-125 5-80 (424)
259 1k0i_A P-hydroxybenzoate hydro 97.7 0.0002 6.7E-09 74.4 11.6 96 224-333 4-162 (394)
260 1y0p_A Fumarate reductase flav 97.7 0.00017 5.9E-09 79.0 11.5 55 278-333 256-316 (571)
261 4a5l_A Thioredoxin reductase; 97.7 0.00014 4.8E-09 72.8 9.9 94 224-334 6-121 (314)
262 3s5w_A L-ornithine 5-monooxyge 97.7 9.9E-05 3.4E-09 78.6 9.2 99 224-332 32-190 (463)
263 4g6h_A Rotenone-insensitive NA 97.7 8E-05 2.7E-09 80.3 8.5 102 58-175 218-333 (502)
264 1pn0_A Phenol 2-monooxygenase; 97.6 0.00029 9.9E-09 78.6 13.2 36 57-92 8-48 (665)
265 1yvv_A Amine oxidase, flavin-c 97.6 0.00029 9.9E-09 71.2 12.0 91 224-331 4-159 (336)
266 4gcm_A TRXR, thioredoxin reduc 97.6 0.00021 7.3E-09 71.6 10.8 94 224-334 8-116 (312)
267 1qo8_A Flavocytochrome C3 fuma 97.6 0.00026 8.9E-09 77.5 12.2 56 278-334 251-312 (566)
268 2vou_A 2,6-dihydroxypyridine h 97.6 0.00022 7.5E-09 74.3 10.6 101 223-342 6-159 (397)
269 2bcg_G Secretory pathway GDP d 97.6 4.4E-05 1.5E-09 81.2 5.0 43 56-98 10-52 (453)
270 4hb9_A Similarities with proba 97.6 5.4E-05 1.8E-09 78.8 5.4 36 58-93 2-37 (412)
271 3nix_A Flavoprotein/dehydrogen 97.5 0.00025 8.6E-09 74.2 10.4 94 224-332 7-164 (421)
272 3ces_A MNMG, tRNA uridine 5-ca 97.5 0.00033 1.1E-08 77.0 11.5 93 224-333 30-180 (651)
273 3atr_A Conserved archaeal prot 97.5 0.00019 6.6E-09 76.2 9.5 96 224-333 8-161 (453)
274 2jae_A L-amino acid oxidase; o 97.5 6.9E-05 2.4E-09 80.4 6.1 43 55-97 9-51 (489)
275 1cjc_A Protein (adrenodoxin re 97.5 5E-05 1.7E-09 80.9 4.9 90 222-333 6-105 (460)
276 3l8k_A Dihydrolipoyl dehydroge 97.5 0.00014 4.7E-09 77.7 8.3 104 56-177 171-275 (466)
277 1rsg_A FMS1 protein; FAD bindi 97.5 3.4E-05 1.2E-09 83.5 3.6 42 56-97 7-49 (516)
278 4fk1_A Putative thioredoxin re 97.5 0.00031 1.1E-08 70.2 10.2 93 224-334 8-117 (304)
279 1ryi_A Glycine oxidase; flavop 97.5 0.00021 7.1E-09 73.8 9.2 53 277-333 164-218 (382)
280 3i6d_A Protoporphyrinogen oxid 97.5 3E-05 1E-09 82.4 2.8 41 57-97 5-51 (470)
281 1y56_B Sarcosine oxidase; dehy 97.5 0.00028 9.7E-09 72.8 10.0 52 278-333 150-204 (382)
282 1d4d_A Flavocytochrome C fumar 97.5 0.00043 1.5E-08 75.9 11.9 56 278-334 256-317 (572)
283 3ihm_A Styrene monooxygenase A 97.5 5.2E-05 1.8E-09 80.1 4.2 35 56-90 21-55 (430)
284 3k30_A Histamine dehydrogenase 97.5 0.00027 9.3E-09 79.3 10.2 102 56-175 522-625 (690)
285 2ivd_A PPO, PPOX, protoporphyr 97.5 6.7E-05 2.3E-09 80.2 4.9 69 56-124 15-88 (478)
286 1lqt_A FPRA; NADP+ derivative, 97.5 5.8E-05 2E-09 80.3 3.9 93 223-333 4-107 (456)
287 3cgv_A Geranylgeranyl reductas 97.4 0.00074 2.5E-08 69.8 12.3 54 278-333 103-161 (397)
288 3c96_A Flavin-containing monoo 97.4 0.00038 1.3E-08 72.8 10.0 102 224-341 6-174 (410)
289 2yg5_A Putrescine oxidase; oxi 97.4 6.1E-05 2.1E-09 79.9 3.7 69 57-125 5-78 (453)
290 3hdq_A UDP-galactopyranose mut 97.4 8.6E-05 3E-09 77.3 4.6 41 56-96 28-68 (397)
291 1v0j_A UDP-galactopyranose mut 97.4 7.6E-05 2.6E-09 78.0 4.2 42 57-98 7-49 (399)
292 3ihg_A RDME; flavoenzyme, anth 97.4 0.00073 2.5E-08 73.3 12.1 56 277-332 120-181 (535)
293 3lov_A Protoporphyrinogen oxid 97.4 9E-05 3.1E-09 79.1 4.7 70 56-125 3-79 (475)
294 1sez_A Protoporphyrinogen oxid 97.4 0.00012 4.1E-09 78.8 5.5 69 56-124 12-85 (504)
295 1w4x_A Phenylacetone monooxyge 97.4 0.00072 2.5E-08 73.5 11.6 98 223-337 17-157 (542)
296 2zxi_A TRNA uridine 5-carboxym 97.4 0.00085 2.9E-08 73.4 12.0 93 224-333 29-179 (637)
297 3e1t_A Halogenase; flavoprotei 97.4 0.00065 2.2E-08 73.4 11.0 55 278-333 112-171 (512)
298 2uzz_A N-methyl-L-tryptophan o 97.3 0.00082 2.8E-08 69.0 11.0 54 278-335 150-205 (372)
299 2bi7_A UDP-galactopyranose mut 97.3 0.00014 4.8E-09 75.6 5.2 40 57-96 3-42 (384)
300 3rp8_A Flavoprotein monooxygen 97.3 0.00091 3.1E-08 69.7 11.4 93 221-332 22-179 (407)
301 2x8g_A Thioredoxin glutathione 97.3 0.00058 2E-08 75.2 10.4 102 57-177 286-398 (598)
302 1c0p_A D-amino acid oxidase; a 97.3 0.00014 4.8E-09 74.6 5.0 35 56-90 5-39 (363)
303 2iid_A L-amino-acid oxidase; f 97.3 0.00014 4.7E-09 78.2 5.1 70 56-125 32-108 (498)
304 2vvm_A Monoamine oxidase N; FA 97.3 0.00011 3.9E-09 78.8 4.4 41 57-97 39-79 (495)
305 3qj4_A Renalase; FAD/NAD(P)-bi 97.3 0.00063 2.2E-08 69.1 9.7 41 288-331 120-162 (342)
306 1i8t_A UDP-galactopyranose mut 97.3 0.00013 4.5E-09 75.3 4.3 39 58-96 2-40 (367)
307 3oz2_A Digeranylgeranylglycero 97.3 0.00091 3.1E-08 68.9 10.7 55 278-332 103-160 (397)
308 1gte_A Dihydropyrimidine dehyd 97.3 0.00013 4.5E-09 85.4 4.7 90 221-332 186-285 (1025)
309 3jsk_A Cypbp37 protein; octame 97.3 0.0015 5.1E-08 66.2 11.5 138 223-375 80-304 (344)
310 3c4a_A Probable tryptophan hyd 97.3 0.00014 4.9E-09 75.3 4.1 35 58-92 1-37 (381)
311 3fmw_A Oxygenase; mithramycin, 97.2 0.00083 2.9E-08 73.4 10.3 94 224-332 51-205 (570)
312 2qa2_A CABE, polyketide oxygen 97.2 0.0021 7E-08 69.1 12.6 55 277-332 107-164 (499)
313 1y56_A Hypothetical protein PH 97.2 0.00035 1.2E-08 75.1 6.5 95 223-333 109-218 (493)
314 3cp8_A TRNA uridine 5-carboxym 97.2 0.0017 5.8E-08 71.3 11.9 93 224-333 23-173 (641)
315 2gmh_A Electron transfer flavo 97.2 0.0023 7.8E-08 70.2 13.0 68 278-347 145-229 (584)
316 2qa1_A PGAE, polyketide oxygen 97.2 0.0021 7.2E-08 69.1 12.4 55 277-332 106-163 (500)
317 3ps9_A TRNA 5-methylaminomethy 97.2 0.0019 6.5E-08 72.2 12.1 54 279-335 419-474 (676)
318 3g5s_A Methylenetetrahydrofola 97.1 0.00042 1.4E-08 71.1 6.0 35 57-91 1-35 (443)
319 2gjc_A Thiazole biosynthetic e 97.1 0.0031 1.1E-07 63.4 12.1 140 223-375 66-294 (326)
320 3g3e_A D-amino-acid oxidase; F 97.1 0.00019 6.6E-09 73.3 3.1 33 58-90 1-39 (351)
321 3nyc_A D-arginine dehydrogenas 97.1 0.0027 9.3E-08 65.0 11.9 54 277-334 154-209 (381)
322 2oln_A NIKD protein; flavoprot 97.1 0.0047 1.6E-07 63.9 13.8 51 278-332 154-206 (397)
323 2qcu_A Aerobic glycerol-3-phos 97.1 0.0018 6.2E-08 69.6 10.8 56 277-332 149-208 (501)
324 4dsg_A UDP-galactopyranose mut 97.1 0.00031 1.1E-08 75.3 4.7 42 56-97 8-50 (484)
325 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.0013 4.6E-08 73.4 10.0 100 56-176 493-630 (671)
326 3c4a_A Probable tryptophan hyd 97.1 0.00066 2.2E-08 70.2 7.0 86 224-333 2-142 (381)
327 1d5t_A Guanine nucleotide diss 97.1 0.00039 1.3E-08 73.4 5.3 42 56-97 5-46 (433)
328 2gag_A Heterotetrameric sarcos 97.1 0.00068 2.3E-08 78.9 7.7 98 57-176 284-385 (965)
329 2xdo_A TETX2 protein; tetracyc 97.1 0.0015 5E-08 68.0 9.4 94 223-333 27-181 (398)
330 2z3y_A Lysine-specific histone 97.1 0.00047 1.6E-08 76.9 5.9 42 55-96 105-146 (662)
331 1o94_A Tmadh, trimethylamine d 97.0 0.00091 3.1E-08 75.4 8.2 106 57-176 528-648 (729)
332 2xag_A Lysine-specific histone 97.0 0.00051 1.8E-08 78.3 6.1 42 55-96 276-317 (852)
333 4at0_A 3-ketosteroid-delta4-5a 97.0 0.0037 1.3E-07 67.3 12.2 54 278-333 203-263 (510)
334 4hb9_A Similarities with proba 97.0 0.005 1.7E-07 63.7 12.6 34 223-270 2-35 (412)
335 3p1w_A Rabgdi protein; GDI RAB 97.0 0.00042 1.4E-08 73.6 4.2 55 277-333 256-313 (475)
336 4gut_A Lysine-specific histone 96.9 0.00053 1.8E-08 77.6 4.5 41 55-95 334-374 (776)
337 3c4n_A Uncharacterized protein 96.9 0.0039 1.3E-07 64.9 10.9 51 279-333 174-235 (405)
338 1b37_A Protein (polyamine oxid 96.9 0.00062 2.1E-08 72.6 4.5 41 57-97 4-45 (472)
339 2r0c_A REBC; flavin adenine di 96.7 0.0054 1.9E-07 66.7 11.0 52 278-332 139-194 (549)
340 4b63_A L-ornithine N5 monooxyg 96.6 0.0062 2.1E-07 65.4 10.4 109 224-332 41-212 (501)
341 2aqj_A Tryptophan halogenase, 96.6 0.011 3.9E-07 63.9 11.9 53 278-334 166-222 (538)
342 1jnr_A Adenylylsulfate reducta 96.5 0.0014 4.9E-08 72.7 4.5 35 57-91 22-60 (643)
343 3ayj_A Pro-enzyme of L-phenyla 96.4 0.0011 3.8E-08 73.6 2.6 36 57-92 56-100 (721)
344 1kdg_A CDH, cellobiose dehydro 96.3 0.0021 7.2E-08 69.9 4.2 36 56-91 6-41 (546)
345 3t37_A Probable dehydrogenase; 96.2 0.0025 8.7E-08 68.8 4.2 35 57-91 17-52 (526)
346 2e5v_A L-aspartate oxidase; ar 96.1 0.021 7.3E-07 60.7 10.8 52 278-333 120-175 (472)
347 2e4g_A Tryptophan halogenase; 95.9 0.044 1.5E-06 59.4 12.0 53 278-334 195-252 (550)
348 1ju2_A HydroxynitrIle lyase; f 95.8 0.0044 1.5E-07 67.2 3.4 35 56-91 25-59 (536)
349 3q9t_A Choline dehydrogenase a 95.7 0.0063 2.2E-07 66.4 4.6 36 56-91 5-41 (577)
350 1coy_A Cholesterol oxidase; ox 95.6 0.0087 3E-07 64.4 4.8 38 55-92 9-46 (507)
351 2pyx_A Tryptophan halogenase; 95.6 0.043 1.5E-06 59.1 10.3 52 278-333 176-232 (526)
352 3fwz_A Inner membrane protein 95.5 0.013 4.4E-07 51.1 4.9 36 55-90 5-40 (140)
353 3qvp_A Glucose oxidase; oxidor 95.5 0.0082 2.8E-07 65.5 4.3 36 56-91 18-54 (583)
354 1n4w_A CHOD, cholesterol oxida 95.5 0.0078 2.7E-07 64.7 4.1 37 57-93 5-41 (504)
355 2weu_A Tryptophan 5-halogenase 95.4 0.075 2.6E-06 56.9 11.7 53 277-333 173-229 (511)
356 1gpe_A Protein (glucose oxidas 95.2 0.012 4E-07 64.6 4.4 37 56-92 23-60 (587)
357 3fim_B ARYL-alcohol oxidase; A 95.1 0.009 3.1E-07 65.0 3.1 36 57-92 2-38 (566)
358 2g1u_A Hypothetical protein TM 95.1 0.018 6.1E-07 51.1 4.5 35 56-90 18-52 (155)
359 3eag_A UDP-N-acetylmuramate:L- 95.0 0.038 1.3E-06 55.7 7.2 36 56-91 3-39 (326)
360 1id1_A Putative potassium chan 94.9 0.02 6.9E-07 50.6 4.4 34 56-89 2-35 (153)
361 3kkj_A Amine oxidase, flavin-c 94.9 0.017 5.8E-07 55.0 4.1 34 224-271 4-37 (336)
362 4gut_A Lysine-specific histone 94.9 0.14 4.6E-06 57.9 12.0 39 290-331 542-582 (776)
363 3llv_A Exopolyphosphatase-rela 94.8 0.02 6.9E-07 49.7 4.1 33 57-89 6-38 (141)
364 2jbv_A Choline oxidase; alcoho 94.8 0.018 6.3E-07 62.4 4.6 37 56-92 12-49 (546)
365 1lss_A TRK system potassium up 94.7 0.026 8.8E-07 48.6 4.3 33 57-89 4-36 (140)
366 3ic5_A Putative saccharopine d 94.6 0.024 8.3E-07 47.1 3.8 33 57-89 5-38 (118)
367 3g5s_A Methylenetetrahydrofola 94.2 0.022 7.6E-07 58.4 3.1 32 224-269 3-34 (443)
368 1jnr_A Adenylylsulfate reducta 94.0 0.14 4.8E-06 56.6 9.4 52 283-334 157-218 (643)
369 1vg0_A RAB proteins geranylger 93.6 0.053 1.8E-06 59.5 5.0 40 56-95 7-46 (650)
370 3dfz_A SIRC, precorrin-2 dehyd 93.6 0.056 1.9E-06 51.1 4.5 34 56-89 30-63 (223)
371 2hmt_A YUAA protein; RCK, KTN, 93.6 0.042 1.5E-06 47.4 3.5 34 57-90 6-39 (144)
372 1kyq_A Met8P, siroheme biosynt 93.0 0.053 1.8E-06 52.9 3.4 35 56-90 12-46 (274)
373 3c85_A Putative glutathione-re 92.8 0.073 2.5E-06 48.4 3.9 35 56-90 38-73 (183)
374 1f0y_A HCDH, L-3-hydroxyacyl-C 92.7 0.093 3.2E-06 52.0 4.9 35 56-90 14-48 (302)
375 3fpz_A Thiazole biosynthetic e 92.7 0.053 1.8E-06 54.4 3.1 70 222-303 65-142 (326)
376 3lk7_A UDP-N-acetylmuramoylala 92.6 0.25 8.6E-06 52.0 8.3 76 221-334 8-84 (451)
377 2x5o_A UDP-N-acetylmuramoylala 92.3 0.078 2.7E-06 55.7 3.8 35 57-91 5-39 (439)
378 4ffl_A PYLC; amino acid, biosy 92.2 0.11 3.7E-06 53.0 4.7 36 57-92 1-36 (363)
379 4dgk_A Phytoene dehydrogenase; 92.2 0.068 2.3E-06 56.9 3.3 36 223-272 2-37 (501)
380 3l4b_C TRKA K+ channel protien 91.9 0.097 3.3E-06 49.1 3.7 33 58-90 1-33 (218)
381 3oj0_A Glutr, glutamyl-tRNA re 91.8 0.15 5.2E-06 44.3 4.5 33 57-89 21-53 (144)
382 3lk7_A UDP-N-acetylmuramoylala 91.7 0.11 3.8E-06 54.7 4.2 35 56-90 8-42 (451)
383 3eag_A UDP-N-acetylmuramate:L- 91.6 0.38 1.3E-05 48.2 7.8 74 222-334 4-78 (326)
384 4e12_A Diketoreductase; oxidor 91.5 0.16 5.4E-06 49.9 4.8 35 56-90 3-37 (283)
385 4dio_A NAD(P) transhydrogenase 91.4 0.16 5.4E-06 52.3 4.8 34 57-90 190-223 (405)
386 4g65_A TRK system potassium up 91.2 0.13 4.6E-06 54.3 4.2 34 57-90 3-36 (461)
387 2a9f_A Putative malic enzyme ( 90.9 0.15 5.1E-06 52.1 3.9 35 56-90 187-222 (398)
388 2iid_A L-amino-acid oxidase; f 90.5 0.21 7.1E-06 53.1 5.0 60 222-295 33-110 (498)
389 3i3l_A Alkylhalidase CMLS; fla 90.5 0.18 6E-06 55.1 4.4 33 223-269 24-56 (591)
390 3p2y_A Alanine dehydrogenase/p 90.5 0.16 5.6E-06 51.8 3.8 34 57-90 184-217 (381)
391 1lld_A L-lactate dehydrogenase 90.4 0.21 7.1E-06 49.8 4.5 34 57-90 7-42 (319)
392 3ado_A Lambda-crystallin; L-gu 90.3 0.16 5.5E-06 50.7 3.6 34 57-90 6-39 (319)
393 2ew2_A 2-dehydropantoate 2-red 90.3 0.21 7E-06 49.5 4.4 33 57-89 3-35 (316)
394 3dfz_A SIRC, precorrin-2 dehyd 90.3 0.32 1.1E-05 45.9 5.4 110 220-375 29-142 (223)
395 3vtf_A UDP-glucose 6-dehydroge 90.3 0.24 8.1E-06 51.8 4.9 39 52-90 16-54 (444)
396 3gpi_A NAD-dependent epimerase 90.2 0.21 7.2E-06 48.7 4.3 35 56-90 2-36 (286)
397 1vl6_A Malate oxidoreductase; 90.1 0.19 6.5E-06 51.2 3.9 34 56-89 191-225 (388)
398 3i83_A 2-dehydropantoate 2-red 90.1 0.23 7.9E-06 49.6 4.5 32 58-89 3-34 (320)
399 3e8x_A Putative NAD-dependent 89.9 0.24 8.1E-06 46.8 4.3 37 54-90 18-55 (236)
400 3ius_A Uncharacterized conserv 89.9 0.24 8.3E-06 48.1 4.5 34 57-90 5-38 (286)
401 3doj_A AT3G25530, dehydrogenas 89.9 0.26 9E-06 49.0 4.8 37 54-90 18-54 (310)
402 1pzg_A LDH, lactate dehydrogen 89.8 0.27 9.3E-06 49.4 4.8 34 57-90 9-43 (331)
403 3nrn_A Uncharacterized protein 89.7 0.25 8.6E-06 51.2 4.6 34 224-271 2-35 (421)
404 2raf_A Putative dinucleotide-b 89.5 0.31 1E-05 45.4 4.7 36 56-91 18-53 (209)
405 2dpo_A L-gulonate 3-dehydrogen 89.4 0.25 8.5E-06 49.4 4.1 35 56-90 5-39 (319)
406 3gvi_A Malate dehydrogenase; N 89.4 0.3 1E-05 48.9 4.8 36 55-90 5-41 (324)
407 3ihm_A Styrene monooxygenase A 89.2 0.22 7.7E-06 51.9 3.8 33 223-269 23-55 (430)
408 1x13_A NAD(P) transhydrogenase 89.1 0.29 9.8E-06 50.7 4.4 34 57-90 172-205 (401)
409 3ghy_A Ketopantoate reductase 89.1 0.27 9.2E-06 49.5 4.2 33 57-89 3-35 (335)
410 3k6j_A Protein F01G10.3, confi 89.1 0.39 1.3E-05 50.5 5.4 38 54-91 51-88 (460)
411 1bg6_A N-(1-D-carboxylethyl)-L 88.8 0.31 1.1E-05 49.2 4.5 33 57-89 4-36 (359)
412 1pjq_A CYSG, siroheme synthase 88.7 0.29 9.9E-06 51.6 4.3 34 56-89 11-44 (457)
413 1ks9_A KPA reductase;, 2-dehyd 88.7 0.36 1.2E-05 47.1 4.7 32 59-90 2-33 (291)
414 3ka7_A Oxidoreductase; structu 88.7 0.31 1E-05 50.4 4.4 44 285-331 204-249 (425)
415 1zcj_A Peroxisomal bifunctiona 88.7 0.47 1.6E-05 50.0 5.9 35 56-90 36-70 (463)
416 1l7d_A Nicotinamide nucleotide 88.6 0.35 1.2E-05 49.7 4.7 35 56-90 171-205 (384)
417 3dme_A Conserved exported prot 88.5 0.3 1E-05 49.1 4.2 33 224-270 6-38 (369)
418 1hdo_A Biliverdin IX beta redu 88.4 0.39 1.3E-05 43.8 4.5 33 58-90 4-37 (206)
419 3hn2_A 2-dehydropantoate 2-red 88.4 0.26 8.9E-06 49.0 3.5 32 58-89 3-34 (312)
420 2hjr_A Malate dehydrogenase; m 88.3 0.4 1.4E-05 48.1 4.8 34 57-90 14-48 (328)
421 3gg2_A Sugar dehydrogenase, UD 88.3 0.35 1.2E-05 50.8 4.5 33 58-90 3-35 (450)
422 1t2d_A LDH-P, L-lactate dehydr 88.3 0.41 1.4E-05 47.9 4.9 34 57-90 4-38 (322)
423 4gde_A UDP-galactopyranose mut 88.3 0.32 1.1E-05 51.7 4.3 36 223-271 11-46 (513)
424 3p7m_A Malate dehydrogenase; p 88.3 0.42 1.4E-05 47.8 4.9 36 55-90 3-39 (321)
425 2aef_A Calcium-gated potassium 88.1 0.29 9.8E-06 46.4 3.4 34 56-90 8-41 (234)
426 3g79_A NDP-N-acetyl-D-galactos 88.1 0.36 1.2E-05 51.0 4.5 35 57-91 18-54 (478)
427 3k7m_X 6-hydroxy-L-nicotine ox 88.0 0.31 1.1E-05 50.5 4.0 34 224-271 3-36 (431)
428 3dhn_A NAD-dependent epimerase 88.0 0.4 1.4E-05 44.7 4.4 34 57-90 4-38 (227)
429 4huj_A Uncharacterized protein 88.0 0.24 8.2E-06 46.6 2.8 36 55-90 21-57 (220)
430 3k96_A Glycerol-3-phosphate de 88.0 0.41 1.4E-05 48.7 4.6 34 57-90 29-62 (356)
431 1pjc_A Protein (L-alanine dehy 87.9 0.4 1.4E-05 48.8 4.6 34 57-90 167-200 (361)
432 3tl2_A Malate dehydrogenase; c 87.9 0.44 1.5E-05 47.5 4.7 34 56-89 7-41 (315)
433 3fwz_A Inner membrane protein 87.8 0.94 3.2E-05 38.9 6.3 73 223-331 8-80 (140)
434 2v6b_A L-LDH, L-lactate dehydr 87.8 0.4 1.4E-05 47.5 4.4 33 58-90 1-35 (304)
435 2y0c_A BCEC, UDP-glucose dehyd 87.8 0.39 1.3E-05 50.9 4.5 34 57-90 8-41 (478)
436 3nks_A Protoporphyrinogen oxid 87.8 0.29 1E-05 51.5 3.6 34 224-271 4-39 (477)
437 2vns_A Metalloreductase steap3 87.8 0.38 1.3E-05 45.0 4.0 35 56-90 27-61 (215)
438 1jw9_B Molybdopterin biosynthe 87.6 0.34 1.2E-05 46.5 3.7 34 57-90 31-65 (249)
439 1evy_A Glycerol-3-phosphate de 87.6 0.35 1.2E-05 49.2 3.9 33 58-90 16-48 (366)
440 2ewd_A Lactate dehydrogenase,; 87.5 0.41 1.4E-05 47.7 4.3 34 57-90 4-38 (317)
441 3pid_A UDP-glucose 6-dehydroge 87.4 0.46 1.6E-05 49.4 4.7 35 55-90 34-68 (432)
442 1y6j_A L-lactate dehydrogenase 87.3 0.44 1.5E-05 47.6 4.4 34 57-90 7-42 (318)
443 2i6t_A Ubiquitin-conjugating e 87.3 0.37 1.3E-05 47.8 3.8 35 56-90 13-49 (303)
444 3i83_A 2-dehydropantoate 2-red 87.2 1.8 6.1E-05 43.0 8.9 45 224-296 4-48 (320)
445 3qha_A Putative oxidoreductase 87.1 0.43 1.5E-05 47.0 4.2 34 57-90 15-48 (296)
446 3g0o_A 3-hydroxyisobutyrate de 87.1 0.48 1.6E-05 46.8 4.5 35 56-90 6-40 (303)
447 3l9w_A Glutathione-regulated p 87.1 0.4 1.4E-05 49.8 4.0 34 57-90 4-37 (413)
448 1nyt_A Shikimate 5-dehydrogena 87.0 0.53 1.8E-05 45.8 4.7 34 56-89 118-151 (271)
449 3i6d_A Protoporphyrinogen oxid 87.0 0.44 1.5E-05 49.8 4.4 41 223-271 6-46 (470)
450 2h78_A Hibadh, 3-hydroxyisobut 87.0 0.42 1.4E-05 47.1 4.0 34 57-90 3-36 (302)
451 1ur5_A Malate dehydrogenase; o 86.9 0.52 1.8E-05 46.8 4.6 33 58-90 3-36 (309)
452 2pzm_A Putative nucleotide sug 86.9 0.67 2.3E-05 46.2 5.5 38 53-90 16-54 (330)
453 2gf3_A MSOX, monomeric sarcosi 86.8 0.43 1.5E-05 48.6 4.1 33 224-270 5-37 (389)
454 3phh_A Shikimate dehydrogenase 86.8 0.57 1.9E-05 45.5 4.7 34 57-90 118-151 (269)
455 2e1m_A L-glutamate oxidase; L- 86.7 0.47 1.6E-05 48.5 4.3 37 221-271 43-80 (376)
456 3ew7_A LMO0794 protein; Q8Y8U8 86.6 0.55 1.9E-05 43.4 4.4 32 59-90 2-34 (221)
457 3dtt_A NADP oxidoreductase; st 86.6 0.54 1.9E-05 44.9 4.5 37 54-90 16-52 (245)
458 2eez_A Alanine dehydrogenase; 86.5 0.53 1.8E-05 48.0 4.6 35 56-90 165-199 (369)
459 3pef_A 6-phosphogluconate dehy 86.4 0.53 1.8E-05 46.1 4.4 33 58-90 2-34 (287)
460 3ego_A Probable 2-dehydropanto 86.4 0.58 2E-05 46.4 4.7 33 57-90 2-34 (307)
461 2jae_A L-amino acid oxidase; o 86.4 0.57 1.9E-05 49.5 4.9 37 222-272 11-47 (489)
462 2g1u_A Hypothetical protein TM 86.3 0.74 2.5E-05 40.3 4.9 37 220-270 17-53 (155)
463 1s3e_A Amine oxidase [flavin-c 86.2 0.46 1.6E-05 50.8 4.1 39 291-332 226-266 (520)
464 4id9_A Short-chain dehydrogena 86.2 0.47 1.6E-05 47.5 4.0 38 54-91 16-54 (347)
465 2egg_A AROE, shikimate 5-dehyd 86.2 0.66 2.3E-05 45.8 4.9 34 56-89 140-174 (297)
466 1jay_A Coenzyme F420H2:NADP+ o 86.1 0.66 2.3E-05 42.9 4.6 32 59-90 2-34 (212)
467 3pdu_A 3-hydroxyisobutyrate de 86.1 0.34 1.2E-05 47.5 2.8 34 57-90 1-34 (287)
468 4dll_A 2-hydroxy-3-oxopropiona 86.1 0.52 1.8E-05 47.0 4.1 35 56-90 30-64 (320)
469 3ghy_A Ketopantoate reductase 86.0 1.4 4.7E-05 44.2 7.3 87 223-345 4-90 (335)
470 3r6d_A NAD-dependent epimerase 85.9 0.78 2.7E-05 42.6 5.1 33 57-89 5-39 (221)
471 1pn0_A Phenol 2-monooxygenase; 85.8 0.42 1.4E-05 53.0 3.6 39 224-271 10-48 (665)
472 1zej_A HBD-9, 3-hydroxyacyl-CO 85.8 0.64 2.2E-05 45.8 4.5 35 55-90 10-44 (293)
473 3l6d_A Putative oxidoreductase 85.7 0.76 2.6E-05 45.5 5.2 35 56-90 8-42 (306)
474 3g17_A Similar to 2-dehydropan 85.7 0.35 1.2E-05 47.6 2.7 33 58-90 3-35 (294)
475 4a7p_A UDP-glucose dehydrogena 85.7 0.59 2E-05 49.0 4.5 35 57-91 8-42 (446)
476 3qvo_A NMRA family protein; st 85.7 0.54 1.9E-05 44.3 3.9 37 54-90 20-58 (236)
477 2b9w_A Putative aminooxidase; 85.6 0.73 2.5E-05 47.6 5.2 36 223-272 7-43 (424)
478 2uyy_A N-PAC protein; long-cha 85.6 0.67 2.3E-05 46.0 4.7 34 57-90 30-63 (316)
479 1c0p_A D-amino acid oxidase; a 85.6 0.59 2E-05 47.2 4.4 31 224-268 8-38 (363)
480 2we8_A Xanthine dehydrogenase; 85.5 0.8 2.7E-05 46.9 5.3 38 57-94 204-241 (386)
481 1guz_A Malate dehydrogenase; o 85.5 0.65 2.2E-05 46.1 4.5 32 59-90 2-35 (310)
482 3vps_A TUNA, NAD-dependent epi 85.5 0.61 2.1E-05 45.9 4.3 36 56-91 6-42 (321)
483 3llv_A Exopolyphosphatase-rela 85.4 1.5 5.3E-05 37.4 6.4 34 222-269 6-39 (141)
484 4b4o_A Epimerase family protei 85.4 0.67 2.3E-05 45.3 4.5 33 58-90 1-34 (298)
485 1dlj_A UDP-glucose dehydrogena 85.4 0.67 2.3E-05 47.9 4.7 31 59-90 2-32 (402)
486 2vhw_A Alanine dehydrogenase; 85.4 0.66 2.3E-05 47.5 4.6 35 56-90 167-201 (377)
487 2dkh_A 3-hydroxybenzoate hydro 85.3 0.35 1.2E-05 53.3 2.7 34 224-271 34-68 (639)
488 1mv8_A GMD, GDP-mannose 6-dehy 85.3 0.52 1.8E-05 49.3 3.9 32 59-90 2-33 (436)
489 3i6i_A Putative leucoanthocyan 85.2 0.58 2E-05 46.9 4.1 36 55-90 8-44 (346)
490 2yg5_A Putrescine oxidase; oxi 85.2 0.61 2.1E-05 48.7 4.4 59 223-296 6-81 (453)
491 2dkn_A 3-alpha-hydroxysteroid 85.1 0.71 2.4E-05 43.7 4.5 34 57-90 1-35 (255)
492 1z82_A Glycerol-3-phosphate de 85.1 0.69 2.4E-05 46.4 4.5 35 56-90 13-47 (335)
493 2o3j_A UDP-glucose 6-dehydroge 85.0 0.56 1.9E-05 49.7 4.0 34 57-90 9-44 (481)
494 4ezb_A Uncharacterized conserv 85.0 0.71 2.4E-05 46.0 4.5 34 57-90 24-58 (317)
495 3h2s_A Putative NADH-flavin re 84.9 0.72 2.5E-05 42.8 4.3 32 59-90 2-34 (224)
496 3c24_A Putative oxidoreductase 84.9 0.86 3E-05 44.5 5.0 33 57-89 11-44 (286)
497 4aj2_A L-lactate dehydrogenase 84.9 0.86 2.9E-05 45.7 5.0 35 55-89 17-53 (331)
498 3pqe_A L-LDH, L-lactate dehydr 84.9 0.67 2.3E-05 46.4 4.2 33 57-89 5-39 (326)
499 4hv4_A UDP-N-acetylmuramate--L 84.8 1.7 5.7E-05 46.2 7.6 87 219-347 19-106 (494)
500 1hyh_A L-hicdh, L-2-hydroxyiso 84.8 0.58 2E-05 46.4 3.8 33 58-90 2-36 (309)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=7.9e-76 Score=638.63 Aligned_cols=435 Identities=39% Similarity=0.681 Sum_probs=377.6
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
.+.++||||||||+||+++|..|++.+++|||||++++|.|+|++|+++.|.++++++..+++.++.....+++|++++|
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v 118 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEA 118 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEE
Confidence 34578999999999999999999999999999999999999999999999999999999999888765544689999999
Q ss_pred EEEecCCCEEEEeecCccC----------CCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHH
Q 045826 134 YKIDAEKKQIYCRTTEDRT----------CGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVI 203 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~----------~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~ 203 (584)
+.||+++++|.+.+..... ....+..+++||+||||||+.++++++||++++++++++++++.++++++.
T Consensus 119 ~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~ 198 (502)
T 4g6h_A 119 TSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFA 198 (502)
T ss_dssp EEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHH
T ss_pred EEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHH
Confidence 9999999999987532110 011123589999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHH
Q 045826 204 DCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASA 283 (584)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~ 283 (584)
+.++.+.......++++..++++|||||++|+|+|.+|++++.+.+.+.||.+..+.+|+|+++.++++|.+++++++++
T Consensus 199 ~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~ 278 (502)
T 4g6h_A 199 ANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYA 278 (502)
T ss_dssp HHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHH
T ss_pred HHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHH
Confidence 99999887665666777889999999999999999999999988888888877778999999999999999999999999
Q ss_pred HHHHHhCCcEEEeCCceeEEcCCeEEEEeC-CCCe--EEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCC
Q 045826 284 EEKFKRDGIDLKTGSMVVKLSDKEISTKDR-ATGQ--ISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEW 358 (584)
Q Consensus 284 ~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~-~~G~--~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~ 358 (584)
++.|+++||+++++++|++++++++.+... .+|+ ..+|++|+||||+|++++|.+..+...++. +.+|+|.||++
T Consensus 279 ~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~ 358 (502)
T 4g6h_A 279 QSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDF 358 (502)
T ss_dssp HHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTT
T ss_pred HHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCc
Confidence 999999999999999999999998876542 3453 235999999999999999888888777765 56789999999
Q ss_pred CccCCCCCEEEeCccccccccchhhhHHHHhhhccccCCCCcchhhhHHHHHhhhccCchhHHHHhHhhhhhHHHHhhhc
Q 045826 359 LRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVLLKNA 438 (584)
Q Consensus 359 l~~~~~~~VfaiGD~a~~~~~~~~~~~~~~~~~a~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (584)
||++++|||||+|||+.
T Consensus 359 lq~~~~~~IfAiGD~a~--------------------------------------------------------------- 375 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAF--------------------------------------------------------------- 375 (502)
T ss_dssp SBBTTCSSEEECGGGEE---------------------------------------------------------------
T ss_pred cccCCCCCEEEEEcccC---------------------------------------------------------------
Confidence 99999999999999996
Q ss_pred cCCcccccccccHHHHHHHhhhhcccCCCCCcchhhHHHHHHHHHHHHhhhhhcccCC----CC----CccccCCCCCCC
Q 045826 439 EEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCEKNP----EG----PLRFRGAGRHRF 510 (584)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ta~~A~~qg~~~a~~~~~~~~~~~~~----~~----~~~~~~~~~~~~ 510 (584)
.|+|++||+|.|||+++|+||.+...++... .. ...+.+ +++
T Consensus 376 ---------------------------~~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 425 (502)
T 4g6h_A 376 ---------------------------AGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEE---NNF 425 (502)
T ss_dssp ---------------------------SSSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHH---TTC
T ss_pred ---------------------------CCCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcC---CCC
Confidence 3579999999999999999998765432100 00 001223 578
Q ss_pred CCCeeccccceeEeCCcceeecccCCCc----eecchHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccCCCC
Q 045826 511 HPFRYKHFGQFAPLGGEEAAAQLELPFD----WISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSR 583 (584)
Q Consensus 511 ~~f~~~~~G~~~~lG~~~av~~~~~~~~----~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 583 (584)
+||+|+++|+|++||+++||++ +++. +..+|++||++|+++|++++++||||+++++||+++++||||+||
T Consensus 426 ~pF~y~~~G~~a~lG~~~av~~--~~~~~~~~~~~~G~~a~~~w~~~yl~~l~~~r~r~~v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 426 KPFKYNDLGALAYLGSERAIAT--IRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp CCCCCCCCEEEEECSTTCEEEE--EEETTEEEEEEEEHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred CCCEecCcceEEEEeCCceEEE--ccCCCccceecccHHHHHHHHHHHHHHccchhhhHHHHHHHHHHHhCCCCCcC
Confidence 8999999999999999999999 6431 445799999999999999999999999999999999999999998
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=2.3e-53 Score=454.82 Aligned_cols=395 Identities=18% Similarity=0.243 Sum_probs=312.3
Q ss_pred CeEEEECCcHHHHHHHHhccc--CCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 58 KKVVVLGTGWAGTTFLKILKS--NSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~--~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
|+|||||||+||+++|.+|++ .+++|||||++++|.|+|+++++..|..+++++..++++++++.+ ++|++++|+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g--v~~i~~~v~~ 80 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN--IEFINEKAES 80 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT--EEEECSCEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC--cEEEEeEEEE
Confidence 689999999999999999985 458999999999999999999999999999999999999998887 8899999999
Q ss_pred EecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCC
Q 045826 136 IDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLS 215 (584)
Q Consensus 136 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~ 215 (584)
||+++++|.+.++. +++||+||||||+++. +++||+.++++.+++.+++.++++++.+...
T Consensus 81 Id~~~~~V~~~~g~----------~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~-------- 141 (430)
T 3hyw_A 81 IDPDANTVTTQSGK----------KIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYA-------- 141 (430)
T ss_dssp EETTTTEEEETTCC----------EEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHH--------
T ss_pred EECCCCEEEECCCC----------EEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhcc--------
Confidence 99999999987764 8999999999999864 5799999999999999999999998866432
Q ss_pred HHHHhccceEEEECCChhHHHHHHHHHHHH---HHhHhhhCcCCCCCcEEEEecCCccccc---cccHHHHHHHHHHHHh
Q 045826 216 DEERKKILHFVVVGGGPTGVEFAAALHDFV---IDDLSKLYPSLKEFTRITLLEAGDHILN---MFDKRITASAEEKFKR 289 (584)
Q Consensus 216 ~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~---~~~~~~~~~~~~~~~~V~lv~~~~~il~---~~~~~~~~~~~~~L~~ 289 (584)
...++|+||+ +|+|++..+.++. ...+.+. ..+.+.+|++++..+.+.+ ...+...+.+++.+++
T Consensus 142 ------~~~~vv~gg~-~gve~~~~~~e~a~~~~~~l~~~--g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~ 212 (430)
T 3hyw_A 142 ------NPGPVVIGAI-PGVSCFGPAYEFALMLHYELKKR--GIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAE 212 (430)
T ss_dssp ------SCCCEEEEEC-TTCCCCHHHHHHHHHHHHHHHHT--TCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHH
T ss_pred ------CCceEEEeCC-CcEEEhHHHHHHHHHHHHHHHHh--cccccceeeeecccchhhhccchhhHHHHHHHHHHHHh
Confidence 2245555554 3554444333321 1111111 1234678999998876533 4567788889999999
Q ss_pred CCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhC--C--cCCCceeeCCCCccCCCC
Q 045826 290 DGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIG--Q--ANRRVLATDEWLRVEGCE 365 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~--l--~~~g~i~Vd~~l~~~~~~ 365 (584)
+||++++++.|++++++++++.+. +|+..++++|++||++|+++++.+ ...+ + +.+|.|.||++||++++|
T Consensus 213 ~GV~~~~~~~v~~v~~~~~~~~~~-~g~~~~i~~d~vi~~~G~~~~~~~----~~~~~~l~~~~~g~i~vd~~lq~t~~~ 287 (430)
T 3hyw_A 213 RNIDWIANVAVKAIEPDKVIYEDL-NGNTHEVPAKFTMFMPSFQGPEVV----ASAGDKVANPANKMVIVNRCFQNPTYK 287 (430)
T ss_dssp TTCEEECSCEEEEECSSEEEEECT-TSCEEEEECSEEEEECEEECCHHH----HTTCTTTBCTTTCCBCCCTTSBCSSST
T ss_pred CCeEEEeCceEEEEeCCceEEEee-CCCceEeecceEEEeccCCCchHH----HhcccccccCCceEEEecccccCCCCC
Confidence 999999999999999999988864 354456999999999998776533 3333 3 345689999999988999
Q ss_pred CEEEeCccccccccchhhhHHHHhhhccccCCCCcchhhhHHHHHhhhccCchhHHHHhHhhhhhHHHHhhhccCCcccc
Q 045826 366 SVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVLLKNAEEDPKKA 445 (584)
Q Consensus 366 ~VfaiGD~a~~~~~~~~~~~~~~~~~a~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (584)
||||+|||+.++... +.
T Consensus 288 ~IfAiGD~a~~p~~~-----------------~~---------------------------------------------- 304 (430)
T 3hyw_A 288 NIFGVGVVTAIPPIE-----------------KT---------------------------------------------- 304 (430)
T ss_dssp TEEECSTTBCCCCSS-----------------CC----------------------------------------------
T ss_pred CEEEeccEEecCCcc-----------------cC----------------------------------------------
Confidence 999999999876311 00
Q ss_pred cccccHHHHHHHhhhhcccCCCCCcchhhHHHHHHHHHHHHhhhhhcccCCCCCccccCCCCCCCCCCeeccccceeEeC
Q 045826 446 SMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLG 525 (584)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~p~ta~~A~~qg~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~G~~~~lG 525 (584)
.-....|++||.|.|||+++|+||.+.+.+ ++.+++.+.+.+.++++|
T Consensus 305 -----------------~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g---------------~~~~~~~~~~~~~~~~~G 352 (430)
T 3hyw_A 305 -----------------PIPTGVPKTGMMIEQMAMAVAHNIVNDIRN---------------NPDKYAPRLSAICIADFG 352 (430)
T ss_dssp -----------------SSCCCCCCCHHHHHHHHHHHHHHHHHHHTT---------------CCCCEEECCCEEEEEECS
T ss_pred -----------------cCcCccchHHHHHHHHHHHHHHHHHHHhcC---------------CCCCcccCCcEEEEEEcC
Confidence 001357999999999999999999887755 345566667788999999
Q ss_pred Ccceeecc-c-CCC---cee---------cchHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccCCC
Q 045826 526 GEEAAAQL-E-LPF---DWI---------SVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSS 582 (584)
Q Consensus 526 ~~~av~~~-~-~~~---~~~---------~~g~~a~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 582 (584)
.+.+++.. + .+. .+. -.++..|++|+..|...++.|+|+++.+++|+....+.|+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 423 (430)
T 3hyw_A 353 EDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCE 423 (430)
T ss_dssp SSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCSEEECSCCC
T ss_pred CCcEEEEEcccCCccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccccccCcccc
Confidence 99998741 0 011 011 136667889999999999999999999999999999998875
No 3
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=6.7e-43 Score=374.67 Aligned_cols=374 Identities=21% Similarity=0.224 Sum_probs=290.5
Q ss_pred CCeEEEECCcHHHHHHHHhccc---CCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS---NSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~---~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
+++|||||||+||+++|..|++ .|++|+|||+++++.|.|.++.+..+....+++..++.+++++.+ ++++.++|
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g--v~~~~~~v 81 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG--IHFIAQSA 81 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT--CEEECSCE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC--CEEEEeEE
Confidence 6899999999999999999997 899999999999999999998888888888888888999998887 55778999
Q ss_pred EEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccc---ccccccCHHHHHHHHHHHHHHHHHhc
Q 045826 134 YKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVE---HAHFLKEVEHAQRIRRSVIDCFERAS 210 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~---~~~~~~~~~~a~~~~~~l~~~~~~~~ 210 (584)
+.+|++++.|.+.++. ++.||+||+|||++++.+.+||+.+ +.+.+++.+++.++++.+.....
T Consensus 82 ~~id~~~~~V~~~~g~----------~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--- 148 (437)
T 3sx6_A 82 EQIDAEAQNITLADGN----------TVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLR--- 148 (437)
T ss_dssp EEEETTTTEEEETTSC----------EEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHH---
T ss_pred EEEEcCCCEEEECCCC----------EEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHh---
Confidence 9999999998886643 7999999999999999999999874 56778899999998887655321
Q ss_pred CCCCCHHHHhccceEEEECCChhH------HHHHHHHHHHHHHhHhhhCcCCCCCcE-EEEecCCccc----cccccHHH
Q 045826 211 LPNLSDEERKKILHFVVVGGGPTG------VEFAAALHDFVIDDLSKLYPSLKEFTR-ITLLEAGDHI----LNMFDKRI 279 (584)
Q Consensus 211 ~~~~~~~~~~~~~~vvVVGgG~~g------vE~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~i----l~~~~~~~ 279 (584)
..+++|||+|+++ +|+|..+++..++. ..+...+ |+++++.+.+ ++.++ ..
T Consensus 149 -----------~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~------g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~ 210 (437)
T 3sx6_A 149 -----------EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKR------GMRDKIPSFTFITSEPYIGHLGIQGVG-DS 210 (437)
T ss_dssp -----------SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCSCEEEEESSSSTTCTTTTCCT-TH
T ss_pred -----------CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCcccCcEEEEEcCCccccccccCcch-HH
Confidence 2267889986654 99998888765421 1112344 9999999987 33333 47
Q ss_pred HHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeC-CCCe---EEEEecceEEEccCCCCCchHHHHHHHhCC-cCCCcee
Q 045826 280 TASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDR-ATGQ---ISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLA 354 (584)
Q Consensus 280 ~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~-~~G~---~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~ 354 (584)
.+.+.+.|+++||+++++++|++|+++++++.+. .+|+ ..++++|.++|++|+.+.+. +.+..++ +.+|+|.
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~---~~~~~gl~~~~G~i~ 287 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPA---VAGVEGLCNPGGFVL 287 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHH---HHTSTTTBCTTSCBC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchh---hhccccccCCCCcEE
Confidence 8889999999999999999999999999887652 2332 34699999999999766542 2222455 6789999
Q ss_pred eCCCCccCCCCCEEEeCccccccccchhhhHHHHhhhccccCCCCcchhhhHHHHHhhhccCchhHHHHhHhhhhhHHHH
Q 045826 355 TDEWLRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVL 434 (584)
Q Consensus 355 Vd~~l~~~~~~~VfaiGD~a~~~~~~~~~~~~~~~~~a~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (584)
||++||++++|||||+|||+..+... |.
T Consensus 288 Vd~~l~t~~~~~Ifa~GD~~~~~~~~-----------------~~----------------------------------- 315 (437)
T 3sx6_A 288 VDEHQRSKKYANIFAAGIAIAIPPVE-----------------TT----------------------------------- 315 (437)
T ss_dssp BCTTSBBSSCTTEEECGGGBCCCCSC-----------------CC-----------------------------------
T ss_pred eChhccCCCCCCEEEEEEEeccCCcC-----------------CC-----------------------------------
Confidence 99999999999999999999864210 00
Q ss_pred hhhccCCcccccccccHHHHHHHhhhhcccCCCCCcchhhHHHHHHHHHHHHhhhhhcccCCCCCccccCCCCCCCCCCe
Q 045826 435 LKNAEEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFR 514 (584)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ta~~A~~qg~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 514 (584)
.-..+.|++++.|.+||+++|+||.+.+.+ +++++|.
T Consensus 316 ----------------------------~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g---------------~~~~~~~ 352 (437)
T 3sx6_A 316 ----------------------------PVPTGAPKTGYMIESMVSAAVHNIKADLEG---------------RKGEQTM 352 (437)
T ss_dssp ----------------------------SSCCCCCCCHHHHHHHHHHHHHHHHHHTTT---------------SCCCCCC
T ss_pred ----------------------------cCCCCCCcHHHHHHHHHHHHHHHHHHHhcC---------------CCCCCcc
Confidence 000246899999999999999999888765 3456666
Q ss_pred eccccce-eEeCCcceeecc-c----CCCceecchHHHHHHHHHHHHHhccch
Q 045826 515 YKHFGQF-APLGGEEAAAQL-E----LPFDWISVGRGSQWLWYSVYASKQISW 561 (584)
Q Consensus 515 ~~~~G~~-~~lG~~~av~~~-~----~~~~~~~~g~~a~~~~~~~~~~~~~~~ 561 (584)
+.....+ +.+|.+.++.-. | -.+.+...|.++|++...++...+-.+
T Consensus 353 ~~~~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~~f~~~~ 405 (437)
T 3sx6_A 353 GTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIRKM 405 (437)
T ss_dssp CSCCEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHHHHHHHHHHHHh
Confidence 6655544 458888776410 0 113467789999999888777666443
No 4
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=2.1e-41 Score=358.97 Aligned_cols=277 Identities=18% Similarity=0.190 Sum_probs=221.7
Q ss_pred CCeEEEECCcHHHHHHHHhccc--CCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS--NSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~--~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
.|||||||||+||+++|.+|++ .+.+|||||++++|.++|+++.+..+..+.+++..+++.+.+ .+ ++|++++|+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~-~g--v~~i~~~v~ 78 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRA-HG--IQVVHDSAL 78 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHH-TT--CEEECSCEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHH-CC--CEEEEeEEE
Confidence 4799999999999999999984 457999999999999999999999999888888888877765 45 778999999
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccc-----cccccCHHHHHHHHHHHHHHHHHh
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEH-----AHFLKEVEHAQRIRRSVIDCFERA 209 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~-----~~~~~~~~~a~~~~~~l~~~~~~~ 209 (584)
.||++++.+.+.++. ++.||+||+|||++++.+++||+.+. .+.+++.+++..+++.+....
T Consensus 79 ~id~~~~~v~~~~g~----------~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 145 (401)
T 3vrd_B 79 GIDPDKKLVKTAGGA----------EFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMD--- 145 (401)
T ss_dssp EEETTTTEEEETTSC----------EEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSC---
T ss_pred EEEccCcEEEecccc----------eeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcc---
Confidence 999999999987654 89999999999999999999998653 356778889888888765431
Q ss_pred cCCCCCHHHHhccceEEEEC------CChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc--cccccHHHHH
Q 045826 210 SLPNLSDEERKKILHFVVVG------GGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI--LNMFDKRITA 281 (584)
Q Consensus 210 ~~~~~~~~~~~~~~~vvVVG------gG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i--l~~~~~~~~~ 281 (584)
.+..+++++ ++..+.|++.+++++.+. .. ...+|++++..+.+ ++.+++.+.+
T Consensus 146 -----------~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~----~~----~~~~v~i~~~~~~~~~~~~~~~~~~~ 206 (401)
T 3vrd_B 146 -----------DGGVVIIAPPAPPFRCPPGPYERASQIAHYLKA----HK----SKSKVIILDNSQTFSKQAQFTKGWER 206 (401)
T ss_dssp -----------TTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHH----HC----TTCEEEEECSSSSCTTHHHHHHHHHH
T ss_pred -----------cCCcEEEecCCccEEeehHHHHHHHHHHHHHHh----cC----CCCEEEEEcccccccccccccHHHHH
Confidence 122333332 345677888887776532 11 24799999999887 4457788888
Q ss_pred HHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC-cCCCceeeCCC
Q 045826 282 SAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLATDEW 358 (584)
Q Consensus 282 ~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~Vd~~ 358 (584)
.+.+.+++.||++++++++..++. +...+.. .+|++ +++|+++|++|++++ .++++.++ +++|+|.||++
T Consensus 207 ~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~-~~g~~--i~~D~vi~~~g~~~~----~~~~~~gl~~~~G~i~VD~~ 279 (401)
T 3vrd_B 207 LYGFGTENALIEWHPGPDAAVVKTDTEAMTVET-SFGET--FKAAVINLIPPQRAG----KIAQSASLTNDSGWCPVDIR 279 (401)
T ss_dssp HSCTTSTTCSEEEECTTTTCEEEEETTTTEEEE-TTSCE--EECSEEEECCCEEEC----HHHHHTTCCCTTSSBCBCTT
T ss_pred HHHHHHHhcCcEEEeCceEEEEEecccceEEEc-CCCcE--EEeeEEEEecCcCCc----hhHhhccccccCCCEEECCC
Confidence 888888999999999999988753 3333332 34776 999999999997655 46677788 78899999986
Q ss_pred -CccCCCCCEEEeCcccc
Q 045826 359 -LRVEGCESVYALGDCAT 375 (584)
Q Consensus 359 -l~~~~~~~VfaiGD~a~ 375 (584)
||++++|||||+|||+.
T Consensus 280 tl~~t~~p~VfAiGDva~ 297 (401)
T 3vrd_B 280 TFESSLQPGIHVIGDACN 297 (401)
T ss_dssp TCBBSSSTTEEECGGGBC
T ss_pred cceecCCCCEEEeccccc
Confidence 88889999999999986
No 5
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=8.1e-41 Score=357.78 Aligned_cols=378 Identities=17% Similarity=0.216 Sum_probs=288.2
Q ss_pred CCeEEEECCcHHHHHHHHhccc--CCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS--NSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~--~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
+++|||||||+||+++|..|++ .|++|+|||+++++.|.+.++....+.....++..++.+++++.+ ++++.++|+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g--v~~~~~~v~ 79 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN--IEFINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT--EEEECSCEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC--CEEEEEEEE
Confidence 4799999999999999999998 899999999999999999888888888888888888888888887 777889999
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCC
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNL 214 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~ 214 (584)
.++++.+.|.+.++. ++.||+||+|||+.+..+++.. .++...+++.+++.++++.+....
T Consensus 80 ~id~~~~~v~~~~g~----------~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~-------- 140 (430)
T 3h28_A 80 SIDPDANTVTTQSGK----------KIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELY-------- 140 (430)
T ss_dssp EEETTTTEEEETTCC----------EEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHH--------
T ss_pred EEECCCCEEEECCCc----------EEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHH--------
Confidence 999999988876543 7999999999999987653321 245567888999988887765432
Q ss_pred CHHHHhccceEEEECCChhH------HHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc----cccccHHHHHHHH
Q 045826 215 SDEERKKILHFVVVGGGPTG------VEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI----LNMFDKRITASAE 284 (584)
Q Consensus 215 ~~~~~~~~~~vvVVGgG~~g------vE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i----l~~~~~~~~~~~~ 284 (584)
...+++|||+|+++ +|+|..+++..++. ..+...+|+++++.+.+ ++.++ ...+.+.
T Consensus 141 ------~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~------g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~l~ 207 (430)
T 3h28_A 141 ------ANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKR------GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRLVE 207 (430)
T ss_dssp ------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCCEEEECSSSSTTCTTTTCST-THHHHHH
T ss_pred ------hcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCccceEEEEecCCccccccccCcch-HHHHHHH
Confidence 12367888987654 99998887755321 11234789999999877 33333 4778889
Q ss_pred HHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHH--hCC-cCCC-ceeeCCCCc
Q 045826 285 EKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ--IGQ-ANRR-VLATDEWLR 360 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~--~~l-~~~g-~i~Vd~~l~ 360 (584)
+.|+++||+++++++|++|+.+++++.+.. ++..++++|.|||++|..+.+. +.+ .++ +.+| +|.||+++|
T Consensus 208 ~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~-~~g~~i~~D~vv~a~G~~~~~~----l~~~~~gl~~~~G~~i~Vd~~l~ 282 (430)
T 3h28_A 208 DLFAERNIDWIANVAVKAIEPDKVIYEDLN-GNTHEVPAKFTMFMPSFQGPEV----VASAGDKVANPANKMVIVNRCFQ 282 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECSSEEEEECTT-SCEEEEECSEEEEECEEECCHH----HHTTCTTTBCTTTCCBCCCTTSB
T ss_pred HHHHHCCCEEEeCCEEEEEeCCeEEEEecC-CCceEEeeeEEEECCCCccchh----HhhccccCcCCCCCEEecCcccc
Confidence 999999999999999999999998887533 3333599999999999766542 333 355 6788 999999999
Q ss_pred cCCCCCEEEeCccccccccchhhhHHHHhhhccccCCCCcchhhhHHHHHhhhccCchhHHHHhHhhhhhHHHHhhhccC
Q 045826 361 VEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVLLKNAEE 440 (584)
Q Consensus 361 ~~~~~~VfaiGD~a~~~~~~~~~~~~~~~~~a~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (584)
++++|||||+|||+..+... |.
T Consensus 283 t~~~~~Ifa~GD~~~~~~~~-----------------~~----------------------------------------- 304 (430)
T 3h28_A 283 NPTYKNIFGVGVVTAIPPIE-----------------KT----------------------------------------- 304 (430)
T ss_dssp CSSSTTEEECSTTBCCCCSS-----------------CC-----------------------------------------
T ss_pred CCCCCCEEEEEeeeccCCcc-----------------CC-----------------------------------------
Confidence 99999999999999864210 00
Q ss_pred CcccccccccHHHHHHHhhhhcccCCCCCcchhhHHHHHHHHHHHHhhhhhcccCCCCCccccCCCCCCCCCCeeccccc
Q 045826 441 DPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQ 520 (584)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ta~~A~~qg~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~G~ 520 (584)
.-..+.|++++.|.+||+++|+||.+.+.++ ++ ++++.....
T Consensus 305 ----------------------~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~---------------~~-~~~~~~~~~ 346 (430)
T 3h28_A 305 ----------------------PIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN---------------PD-KYAPRLSAI 346 (430)
T ss_dssp ----------------------SSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC---------------CC-CEEECCCEE
T ss_pred ----------------------CCCCCCCchHHHHHHHHHHHHHHHHHHhcCC---------------CC-CCcCCcceE
Confidence 0002468999999999999999998887663 22 355665555
Q ss_pred ee-EeCCcceeecc-c----CCCceecchHHHHHHHHHHHHHhccchhhHHHHHH
Q 045826 521 FA-PLGGEEAAAQL-E----LPFDWISVGRGSQWLWYSVYASKQISWRTRFLVIS 569 (584)
Q Consensus 521 ~~-~lG~~~av~~~-~----~~~~~~~~g~~a~~~~~~~~~~~~~~~~~~~~~~~ 569 (584)
++ .+|.+.++... | -.+.+...|.++|++...++...+-.+|......+
T Consensus 347 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~~~~~~~~~~p~ 401 (430)
T 3h28_A 347 CIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPS 401 (430)
T ss_dssp EEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCH
T ss_pred EEEEeCCCceEEEeCCCCCCccceeecccHHHHHHHHHHHHHHHHHhccCCcCch
Confidence 44 48888776520 0 12346778999999999988888766665544433
No 6
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=5.6e-41 Score=353.10 Aligned_cols=260 Identities=23% Similarity=0.344 Sum_probs=223.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC-CCccccccccccCcccccHHHHHHHHHcCCcEEEE-EEE
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF-TPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFK-EAE 132 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~-~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~-~~~ 132 (584)
.+++||||||||+||+++|..|...+.+|+|||+++++.| .|.++....+..+.+++.....+++++.+++ +. ..+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~--~~~~~~ 84 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIK--VITSEF 84 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCE--EECSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCE--EEeCCE
Confidence 3568999999999999999999888999999999998877 5777777777777777777788888888854 44 558
Q ss_pred EEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCC
Q 045826 133 CYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLP 212 (584)
Q Consensus 133 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 212 (584)
|+.||++.++|.+.++. ++.||+||||||++|+.|++||.+ +++.+++.+++.+++..+.
T Consensus 85 V~~id~~~~~v~~~~g~----------~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~--------- 144 (385)
T 3klj_A 85 ATSIDPNNKLVTLKSGE----------KIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK--------- 144 (385)
T ss_dssp EEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHH---------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhh---------
Confidence 99999999999887654 899999999999999999999987 7888999999988877652
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHHhCC
Q 045826 213 NLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFKRDG 291 (584)
Q Consensus 213 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~~~G 291 (584)
.+++++|||||++|+|+|..|++.+ .+|+++++.+++++. +++.+.+.+.+.+++.|
T Consensus 145 --------~~~~vvVIGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~g 202 (385)
T 3klj_A 145 --------NKGKAFIIGGGILGIELAQAIIDSG--------------TPASIGIILEYPLERQLDRDGGLFLKDKLDRLG 202 (385)
T ss_dssp --------HHSCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTT
T ss_pred --------cCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHHhCC
Confidence 3459999999999999999999875 799999999999986 89999999999999999
Q ss_pred cEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEEEeC
Q 045826 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALG 371 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~VfaiG 371 (584)
|++++++.|+++ |++ +++|.||+|+|++++. .+++..++..++.|.||+++|| +.|+|||+|
T Consensus 203 V~~~~~~~v~~i------------g~~--~~~D~vv~a~G~~p~~---~~~~~~gl~~~~gi~vd~~~~t-~~~~IyA~G 264 (385)
T 3klj_A 203 IKIYTNSNFEEM------------GDL--IRSSCVITAVGVKPNL---DFIKDTEIASKRGILVNDHMET-SIKDIYACG 264 (385)
T ss_dssp CEEECSCCGGGC------------HHH--HHHSEEEECCCEEECC---GGGTTSCCCBSSSEEECTTCBC-SSTTEEECG
T ss_pred CEEEeCCEEEEc------------CeE--EecCeEEECcCcccCh---hhhhhcCCCcCCCEEECCCccc-CCCCEEEEE
Confidence 999999998887 443 8999999999965543 4566777743344999999999 899999999
Q ss_pred ccccc
Q 045826 372 DCATI 376 (584)
Q Consensus 372 D~a~~ 376 (584)
||+..
T Consensus 265 D~a~~ 269 (385)
T 3klj_A 265 DVAEF 269 (385)
T ss_dssp GGEEE
T ss_pred eeEec
Confidence 99975
No 7
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=1.4e-40 Score=356.05 Aligned_cols=274 Identities=20% Similarity=0.351 Sum_probs=225.1
Q ss_pred CeEEEECCcHHHHHHHHhcccCC--CeEEEEcCCCCCCCC-CccccccccccCccc--ccHHHHHHHHHcCCcEEEEEEE
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNS--FEVQVVSPRNYFAFT-PLLPSVTNGTVEARS--IVEPIRNIVRKKGMDIQFKEAE 132 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g--~~V~lid~~~~~~~~-p~~~~~~~g~~~~~~--i~~~~~~~~~~~g~~v~~~~~~ 132 (584)
+||||||||+||++||.+|++.| .+|+|||+++++.|. +.++....+...... +....+.++++.++++ +...+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~ 79 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITV-KTYHE 79 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEE-EETEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEE-EeCCe
Confidence 57999999999999999998655 679999999987775 445544444433222 3333456777788554 34678
Q ss_pred EEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCC
Q 045826 133 CYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLP 212 (584)
Q Consensus 133 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 212 (584)
|+.||.+.+.+.+.... ..+..++.||+||||||++|+.|++|| +..+.+++++++..++..+..
T Consensus 80 V~~id~~~~~~~~~~~~-----~~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~-------- 144 (437)
T 4eqs_A 80 VIAINDERQTVSVLNRK-----TNEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA-------- 144 (437)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH--------
T ss_pred EEEEEccCcEEEEEecc-----CCceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc--------
Confidence 99999999999887654 223458999999999999999999998 456778899998887765432
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCc
Q 045826 213 NLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGI 292 (584)
Q Consensus 213 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV 292 (584)
...++++|||||++|+|+|..+++++ .+|+++++.+++++.+++++.+.+.+.|+++||
T Consensus 145 -------~~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV 203 (437)
T 4eqs_A 145 -------NQVDKVLVVGAGYVSLEVLENLYERG--------------LHPTLIHRSDKINKLMDADMNQPILDELDKREI 203 (437)
T ss_dssp -------HTCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTC
T ss_pred -------cCCcEEEEECCccchhhhHHHHHhcC--------------CcceeeeeeccccccccchhHHHHHHHhhccce
Confidence 34569999999999999999999876 799999999999999999999999999999999
Q ss_pred EEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCccCCCCCEEEe
Q 045826 293 DLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVEGCESVYAL 370 (584)
Q Consensus 293 ~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~~~~~~~Vfai 370 (584)
+++++++|++++.+.+++.+ |++ +++|.|+||+|. .|++ .+++..++ +.+|+|.||+++|| +.|||||+
T Consensus 204 ~i~~~~~v~~~~~~~v~~~~---g~~--~~~D~vl~a~G~--~Pn~-~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~ 274 (437)
T 4eqs_A 204 PYRLNEEINAINGNEITFKS---GKV--EHYDMIIEGVGT--HPNS-KFIESSNIKLDRKGFIPVNDKFET-NVPNIYAI 274 (437)
T ss_dssp CEEESCCEEEEETTEEEETT---SCE--EECSEEEECCCE--EESC-GGGTTSSCCCCTTSCEECCTTCBC-SSTTEEEC
T ss_pred EEEeccEEEEecCCeeeecC---CeE--EeeeeEEEEece--ecCc-HHHHhhhhhhccCCcEecCCCccC-CCCCEEEE
Confidence 99999999999999888765 776 999999999995 4544 46666676 67889999999998 89999999
Q ss_pred Ccccccc
Q 045826 371 GDCATIN 377 (584)
Q Consensus 371 GD~a~~~ 377 (584)
|||+..+
T Consensus 275 GDva~~~ 281 (437)
T 4eqs_A 275 GDIATSH 281 (437)
T ss_dssp GGGEEEE
T ss_pred EEccCcc
Confidence 9999864
No 8
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.7e-40 Score=343.02 Aligned_cols=263 Identities=26% Similarity=0.415 Sum_probs=220.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC-CCccccccccccCcccccHHHHHHHHHcCCcEEEEEE-EEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF-TPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEA-ECY 134 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~-~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~-~v~ 134 (584)
..||||||||+||+++|..|++.| +|+|||++++..| .++++....+..+.+++.....+++++.+ ++++.+ +|+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~g~~v~ 84 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRG--IEIRLAEEAK 84 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHT--EEEECSCCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCC--cEEEECCEEE
Confidence 469999999999999999999989 9999999987665 46666666666666666666777888887 667666 699
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCC
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNL 214 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~ 214 (584)
.+|++.+.|. .++. ++.||+||||||++|+.|++|| .++++.+++..++.++++.+.
T Consensus 85 ~id~~~~~V~-~~g~----------~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~----------- 141 (367)
T 1xhc_A 85 LIDRGRKVVI-TEKG----------EVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIE----------- 141 (367)
T ss_dssp EEETTTTEEE-ESSC----------EEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHH-----------
T ss_pred EEECCCCEEE-ECCc----------EEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhh-----------
Confidence 9999988887 4432 7999999999999999999999 567778888998888766542
Q ss_pred CHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEE
Q 045826 215 SDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDL 294 (584)
Q Consensus 215 ~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v 294 (584)
.+++++|||||++|+|+|..+.+++ .+|+++++.+++++ +++++.+.+.+.|++.||++
T Consensus 142 ------~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i 200 (367)
T 1xhc_A 142 ------NSGEAIIIGGGFIGLELAGNLAEAG--------------YHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKF 200 (367)
T ss_dssp ------HHSEEEEEECSHHHHHHHHHHHHTT--------------CEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEE
T ss_pred ------cCCcEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEE
Confidence 2359999999999999999999865 79999999999999 99999999999999999999
Q ss_pred EeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEEEeCccc
Q 045826 295 KTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCA 374 (584)
Q Consensus 295 ~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~VfaiGD~a 374 (584)
+++++|++++.+++++.+ |+ +++|.||||+|.++ +. .+++.+++..+++|.||+++|| +.|+|||+|||+
T Consensus 201 ~~~~~v~~i~~~~v~~~~---g~---i~~D~vi~a~G~~p--~~-~ll~~~gl~~~~gi~Vd~~~~t-~~~~IyA~GD~a 270 (367)
T 1xhc_A 201 FLNSELLEANEEGVLTNS---GF---IEGKVKICAIGIVP--NV-DLARRSGIHTGRGILIDDNFRT-SAKDVYAIGDCA 270 (367)
T ss_dssp ECSCCEEEECSSEEEETT---EE---EECSCEEEECCEEE--CC-HHHHHTTCCBSSSEECCTTSBC-SSTTEEECGGGE
T ss_pred EcCCEEEEEEeeEEEECC---CE---EEcCEEEECcCCCc--CH-HHHHhCCCCCCCCEEECCCccc-CCCCEEEeEeee
Confidence 999999999877776642 54 89999999999544 44 3677788733344999999998 899999999998
Q ss_pred cc
Q 045826 375 TI 376 (584)
Q Consensus 375 ~~ 376 (584)
..
T Consensus 271 ~~ 272 (367)
T 1xhc_A 271 EY 272 (367)
T ss_dssp EB
T ss_pred ec
Confidence 64
No 9
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=1.7e-39 Score=345.32 Aligned_cols=280 Identities=23% Similarity=0.361 Sum_probs=235.6
Q ss_pred CCeEEEECCcHHHHHHHHhccc---CCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS---NSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~---~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
|++|||||||++|+++|..|++ .|++|+|||+++++.+.|.++....+....+++..++.+.+++.+ ++++.++|
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~v 78 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG--IQFQEGTV 78 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT--CEEEECEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC--eEEEEeeE
Confidence 4689999999999999999998 899999999999999999888888888888888899999998888 55778899
Q ss_pred EEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCC
Q 045826 134 YKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPN 213 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~ 213 (584)
+.++++.+.|.+.++.+ +..++.||+||+|+|+.++.+.+||++++...+.+.+++..+++.+.+.
T Consensus 79 ~~i~~~~~~V~~~~g~~------~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~-------- 144 (409)
T 3h8l_A 79 EKIDAKSSMVYYTKPDG------SMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF-------- 144 (409)
T ss_dssp EEEETTTTEEEEECTTS------CEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHC--------
T ss_pred EEEeCCCCEEEEccCCc------ccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHh--------
Confidence 99999999999877541 1246999999999999999899999987777888888888888776431
Q ss_pred CCHHHHhccceEEEECCCh-------------------------hHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCC
Q 045826 214 LSDEERKKILHFVVVGGGP-------------------------TGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAG 268 (584)
Q Consensus 214 ~~~~~~~~~~~vvVVGgG~-------------------------~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 268 (584)
.++++|||+|. .++|+|..+++..++ ...+++.+|+++++.
T Consensus 145 --------~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~------~g~~~~~~v~~~~~~ 210 (409)
T 3h8l_A 145 --------QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKK------KGMLDKVHVTVFSPG 210 (409)
T ss_dssp --------CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHT------TTCTTTEEEEEECSS
T ss_pred --------cCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHH------cCCCCCeEEEEEeCC
Confidence 12677999991 589999988776532 112245799999999
Q ss_pred ccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHh--C
Q 045826 269 DHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI--G 346 (584)
Q Consensus 269 ~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~--~ 346 (584)
+ +++.+++.+.+.+.+.+++.||+++++++|++++.+++++.+ |++ +++|.||+++|+.+++ ++... +
T Consensus 211 ~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~---g~~--~~~D~vi~a~G~~~~~----~l~~~~~~ 280 (409)
T 3h8l_A 211 E-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEK---GNT--IPADITILLPPYTGNP----ALKNSTPD 280 (409)
T ss_dssp S-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETT---SCE--EECSEEEEECCEECCH----HHHTSCGG
T ss_pred c-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECC---CCE--EeeeEEEECCCCCccH----HHHhcccc
Confidence 9 888899999999999999999999999999999999877754 775 9999999999976664 44455 5
Q ss_pred C-cCCCceeeCCCCccCCCCCEEEeCccccc
Q 045826 347 Q-ANRRVLATDEWLRVEGCESVYALGDCATI 376 (584)
Q Consensus 347 l-~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 376 (584)
+ +.+|+|.||+++|++++|||||+|||+..
T Consensus 281 l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~ 311 (409)
T 3h8l_A 281 LVDDGGFIPTDLNMVSIKYDNVYAVGDANSM 311 (409)
T ss_dssp GSCTTSCBCBBTTSBBSSCTTEEECGGGBTT
T ss_pred CcCCCCCEEeCcccccCCCCCEEEeehhccC
Confidence 5 57789999999999899999999999863
No 10
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=1.3e-38 Score=338.41 Aligned_cols=268 Identities=24% Similarity=0.364 Sum_probs=221.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCe--EEEEcCCCCCCCC--CccccccccccCcccccHHHHHHHHHcCCcEEEEEE-
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFE--VQVVSPRNYFAFT--PLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEA- 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~--V~lid~~~~~~~~--p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~- 131 (584)
+++|||||||+||+++|..|++.|++ |+|||+++++.|. ++...+..+......+ ....+++.+.+ ++++.+
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~--i~~~~~~ 78 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEAR--IDMLTGP 78 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTT--CEEEESC
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCC--CEEEeCC
Confidence 46999999999999999999988877 9999999988875 3344455666666665 45556677777 556666
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhc
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERAS 210 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~ 210 (584)
+|+.+|++.+.|.+.++. .+.||+||+|||+.|+.|++||.+ ++++.+++.+++..++..+
T Consensus 79 ~v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~-------- 140 (410)
T 3ef6_A 79 EVTALDVQTRTISLDDGT----------TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW-------- 140 (410)
T ss_dssp CEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC--------
T ss_pred EEEEEECCCCEEEECCCC----------EEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh--------
Confidence 999999999999886653 899999999999999999999976 5677888999888776542
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHHh
Q 045826 211 LPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFKR 289 (584)
Q Consensus 211 ~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~~ 289 (584)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++. +++.+.+.+.+.+++
T Consensus 141 ---------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~ 197 (410)
T 3ef6_A 141 ---------TSATRLLIVGGGLIGCEVATTARKLG--------------LSVTILEAGDELLVRVLGRRIGAWLRGLLTE 197 (410)
T ss_dssp ---------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSHHHHCHHHHHHHHHHHHH
T ss_pred ---------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCccchhhcCHHHHHHHHHHHHH
Confidence 24569999999999999999998864 799999999999874 899999999999999
Q ss_pred CCcEEEeCCceeEEcCCe----EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCC
Q 045826 290 DGIDLKTGSMVVKLSDKE----ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCE 365 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~~~----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~ 365 (584)
.||++++++.|++++.++ +++ .+|++ +++|.||+|+|+.++. .+++.+++..+++|.||++++| +.|
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~---~dg~~--i~aD~Vv~a~G~~p~~---~l~~~~gl~~~~gi~vd~~~~t-~~~ 268 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMA---SDGRS--FVADSALICVGAEPAD---QLARQAGLACDRGVIVDHCGAT-LAK 268 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEE---TTSCE--EECSEEEECSCEEECC---HHHHHTTCCBSSSEECCTTSBC-SST
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEE---CCCCE--EEcCEEEEeeCCeecH---HHHHhCCCccCCeEEEccCeeE-CCC
Confidence 999999999999997652 444 34775 9999999999965543 4677788843355999999998 899
Q ss_pred CEEEeCcccccc
Q 045826 366 SVYALGDCATIN 377 (584)
Q Consensus 366 ~VfaiGD~a~~~ 377 (584)
+|||+|||+..+
T Consensus 269 ~IyA~GD~a~~~ 280 (410)
T 3ef6_A 269 GVFAVGDVASWP 280 (410)
T ss_dssp TEEECGGGEEEE
T ss_pred CEEEEEcceecc
Confidence 999999999754
No 11
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.8e-38 Score=334.71 Aligned_cols=274 Identities=24% Similarity=0.383 Sum_probs=225.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCe--EEEEcCCCCCCCC--CccccccccccCcccccHHHHHHHHHcCCcEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFE--VQVVSPRNYFAFT--PLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~--V~lid~~~~~~~~--p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
++++|||||||+||+++|..|++.|++ |+|||+++++.|. ++...+..+......+.......+.+.+ +++..+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~ 85 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKA--VEMKLG 85 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTT--EEEEET
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCC--cEEEeC
Confidence 457999999999999999999988887 9999999988775 2333555566566666666677888887 667766
Q ss_pred -EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHh
Q 045826 132 -ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERA 209 (584)
Q Consensus 132 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~ 209 (584)
+|+.+|++.+.|.+.++. .+.||+||+|||+.|+.+++||.+ ++++.+++.+++..++..+.
T Consensus 86 ~~v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~------ 149 (415)
T 3lxd_A 86 AEVVSLDPAAHTVKLGDGS----------AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELD------ 149 (415)
T ss_dssp CCEEEEETTTTEEEETTSC----------EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH------
T ss_pred CEEEEEECCCCEEEECCCC----------EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhh------
Confidence 899999999999886653 899999999999999999999976 56778889999888766542
Q ss_pred cCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHH
Q 045826 210 SLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFK 288 (584)
Q Consensus 210 ~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~ 288 (584)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++. +++.+.+.+.+.++
T Consensus 150 ----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~ 205 (415)
T 3lxd_A 150 ----------AGAKNAVVIGGGYIGLEAAAVLTKFG--------------VNVTLLEALPRVLARVAGEALSEFYQAEHR 205 (415)
T ss_dssp ----------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEecCCchhhhhcCHHHHHHHHHHHH
Confidence 11569999999999999999998865 799999999999985 79999999999999
Q ss_pred hCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCC
Q 045826 289 RDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCES 366 (584)
Q Consensus 289 ~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~ 366 (584)
+.||+++++++|++++.+ .+......+|++ +++|.||+|+|+.++. .+++..++..++.|.||+++|| +.|+
T Consensus 206 ~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~--i~aD~Vv~a~G~~p~~---~l~~~~gl~~~~gi~vd~~~~t-~~~~ 279 (415)
T 3lxd_A 206 AHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV--IPADIVIVGIGIVPCV---GALISAGASGGNGVDVDEFCRT-SLTD 279 (415)
T ss_dssp HTTCEEEETCCEEEEEESSSBEEEEEESSSCE--EECSEEEECSCCEESC---HHHHHTTCCCSSSEECCTTCBC-SSTT
T ss_pred hCCCEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECCCCccCh---HHHHhCCCCcCCCEEECCCCCc-CCCC
Confidence 999999999999999643 343222344775 9999999999965544 4677788843344999999999 8999
Q ss_pred EEEeCcccccc
Q 045826 367 VYALGDCATIN 377 (584)
Q Consensus 367 VfaiGD~a~~~ 377 (584)
|||+|||+..+
T Consensus 280 iyA~GD~a~~~ 290 (415)
T 3lxd_A 280 VYAIGDCAAHA 290 (415)
T ss_dssp EEECGGGEEEE
T ss_pred EEEEEeeeeec
Confidence 99999999864
No 12
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6.9e-38 Score=332.31 Aligned_cols=272 Identities=19% Similarity=0.368 Sum_probs=224.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCCCCCCC--CccccccccccCcccccHHHHHHHHHcCCcEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRNYFAFT--PLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAE 132 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~~~~~~--p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~ 132 (584)
+++|||||||+||+++|..|++.|+ +|+|||+++++.|. ++...+..+.....++.......+.+.+ +++...+
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~--i~~~~~~ 78 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQA--IELISDR 78 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTT--EEEECCC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCC--CEEEEEE
Confidence 3689999999999999999999888 89999999987774 3333555666566666666777888887 5566699
Q ss_pred EEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhcC
Q 045826 133 CYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERASL 211 (584)
Q Consensus 133 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 211 (584)
|+.++++.+.|.+.++. .+.||+||+|||+.|+.|++||.+ ++++.+++..++..++..+
T Consensus 79 v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~--------- 139 (404)
T 3fg2_P 79 MVSIDREGRKLLLASGT----------AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM--------- 139 (404)
T ss_dssp EEEEETTTTEEEESSSC----------EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG---------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh---------
Confidence 99999999999887654 899999999999999999999976 5677788888887776543
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHHhC
Q 045826 212 PNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFKRD 290 (584)
Q Consensus 212 ~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~~~ 290 (584)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++. +++.+.+.+.+.+++.
T Consensus 140 --------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~ 197 (404)
T 3fg2_P 140 --------PDKKHVVVIGAGFIGLEFAATARAKG--------------LEVDVVELAPRVMARVVTPEISSYFHDRHSGA 197 (404)
T ss_dssp --------GGCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred --------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCcchhhccCHHHHHHHHHHHHhC
Confidence 24569999999999999999998864 799999999999885 8999999999999999
Q ss_pred CcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEE
Q 045826 291 GIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVY 368 (584)
Q Consensus 291 GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~Vf 368 (584)
||+++++++|++++. +.+......+|++ +++|.||+|+|+.++. .+++..++..++.|.||+++|| +.|+||
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~--i~aD~Vv~a~G~~p~~---~l~~~~gl~~~~Gi~vd~~~~t-~~~~iy 271 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNT--LPCDLVVVGVGVIPNV---EIAAAAGLPTAAGIIVDQQLLT-SDPHIS 271 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSEEEECCCEEECC---HHHHHTTCCBSSSEEECTTSBC-SSTTEE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECcCCccCH---HHHHhCCCCCCCCEEECCCccc-CCCCEE
Confidence 999999999999964 3443233345775 9999999999965554 4677788833234999999998 899999
Q ss_pred EeCcccccc
Q 045826 369 ALGDCATIN 377 (584)
Q Consensus 369 aiGD~a~~~ 377 (584)
|+|||+..+
T Consensus 272 a~GD~a~~~ 280 (404)
T 3fg2_P 272 AIGDCALFE 280 (404)
T ss_dssp ECGGGEEEE
T ss_pred Eeecceeec
Confidence 999999864
No 13
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=7.2e-38 Score=332.43 Aligned_cols=265 Identities=24% Similarity=0.362 Sum_probs=209.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCCCCCCC-Ccc-ccccccccCcccccHHHHHHHHHcCCcEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRNYFAFT-PLL-PSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~~~~~~-p~~-~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
.+++|||||||+||+++|..|++.|+ +|+|||+++++.|. +.+ ..+..+.. .+.+.. + .+.+.+ ++++.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~-~~~~~~--v~~~~~ 79 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRL--D-CKRAPE--VEWLLG 79 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBC--C-CTTSCS--CEEEET
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhH--H-HHHHCC--CEEEcC
Confidence 35799999999999999999998887 59999999877664 222 22222322 221111 1 344555 556666
Q ss_pred -EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCC-CCcccccccccCHHHHHHHHHHHHHHHHHh
Q 045826 132 -ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT-PGVVEHAHFLKEVEHAQRIRRSVIDCFERA 209 (584)
Q Consensus 132 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~i-pG~~~~~~~~~~~~~a~~~~~~l~~~~~~~ 209 (584)
+|+.+|++.++|.+.++. .+.||+||+|||++|..|++ ||.+++++.+++.+++.++++.+
T Consensus 80 ~~v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~------- 142 (408)
T 2gqw_A 80 VTAQSFDPQAHTVALSDGR----------TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL------- 142 (408)
T ss_dssp CCEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC-------
T ss_pred CEEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh-------
Confidence 499999999998886543 79999999999999999999 99866677788888877765432
Q ss_pred cCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHH
Q 045826 210 SLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFK 288 (584)
Q Consensus 210 ~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~ 288 (584)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++. +++++.+.+.+.|+
T Consensus 143 ----------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~ 198 (408)
T 2gqw_A 143 ----------RPQSRLLIVGGGVIGLELAATARTAG--------------VHVSLVETQPRLMSRAAPATLADFVARYHA 198 (408)
T ss_dssp ----------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCcccccccCHHHHHHHHHHHH
Confidence 13569999999999999999998864 799999999999984 89999999999999
Q ss_pred hCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC-cCCCceeeCCCCccCCCCCE
Q 045826 289 RDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLATDEWLRVEGCESV 367 (584)
Q Consensus 289 ~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~Vd~~l~~~~~~~V 367 (584)
+.||+++++++|++++++.+++. +|++ +++|.||+|+|.+++ . .+++..++ .++| |.||+++|| +.|+|
T Consensus 199 ~~GV~i~~~~~v~~i~~~~v~~~---~g~~--i~~D~vi~a~G~~p~--~-~l~~~~gl~~~~g-i~Vd~~~~t-~~~~I 268 (408)
T 2gqw_A 199 AQGVDLRFERSVTGSVDGVVLLD---DGTR--IAADMVVVGIGVLAN--D-ALARAAGLACDDG-IFVDAYGRT-TCPDV 268 (408)
T ss_dssp HTTCEEEESCCEEEEETTEEEET---TSCE--EECSEEEECSCEEEC--C-HHHHHHTCCBSSS-EECCTTCBC-SSTTE
T ss_pred HcCcEEEeCCEEEEEECCEEEEC---CCCE--EEcCEEEECcCCCcc--H-HHHHhCCCCCCCC-EEECCCCcc-CCCCE
Confidence 99999999999999984445443 4765 999999999996544 3 46677777 3445 999999998 89999
Q ss_pred EEeCcccccc
Q 045826 368 YALGDCATIN 377 (584)
Q Consensus 368 faiGD~a~~~ 377 (584)
||+|||+..+
T Consensus 269 yA~GD~~~~~ 278 (408)
T 2gqw_A 269 YALGDVTRQR 278 (408)
T ss_dssp EECGGGEEEE
T ss_pred EEEEEEEEec
Confidence 9999999753
No 14
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=6.9e-37 Score=340.16 Aligned_cols=282 Identities=24% Similarity=0.416 Sum_probs=227.5
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCC-ccccccccccCcc--cccHHHHHHHHHcCCcE
Q 045826 52 EGEFKKKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTP-LLPSVTNGTVEAR--SIVEPIRNIVRKKGMDI 126 (584)
Q Consensus 52 ~~~~~~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p-~~~~~~~g~~~~~--~i~~~~~~~~~~~g~~v 126 (584)
.+.+.+++|||||||+||+++|..|++. +++|+|||++++++|.+ .++....+..... .+...++.+.++.++.+
T Consensus 31 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v 110 (588)
T 3ics_A 31 KDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDI 110 (588)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEE
T ss_pred CCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEE
Confidence 3455678999999999999999999966 89999999999988765 3444444543322 24556777777888664
Q ss_pred EEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCc-c-cccccccCHHHHHHHHHHHHH
Q 045826 127 QFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGV-V-EHAHFLKEVEHAQRIRRSVID 204 (584)
Q Consensus 127 ~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~-~-~~~~~~~~~~~a~~~~~~l~~ 204 (584)
....+|+.++++.+.+.+.+.. +.....+.||+||+|||+.|..|++||. + +.++..++..++..++..+.+
T Consensus 111 -~~~~~V~~id~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~ 184 (588)
T 3ics_A 111 -RVLSEVVKINKEEKTITIKNVT-----TNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE 184 (588)
T ss_dssp -ECSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH
T ss_pred -EECCEEEEEECCCCEEEEeecC-----CCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh
Confidence 2578999999999999887522 1113478999999999999999999998 3 456778888888777665432
Q ss_pred HHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHH
Q 045826 205 CFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284 (584)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~ 284 (584)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++.+++++.+.+.
T Consensus 185 ---------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~ 235 (588)
T 3ics_A 185 ---------------KKPRHATVIGGGFIGVEMVENLRERG--------------IEVTLVEMANQVMPPIDYEMAAYVH 235 (588)
T ss_dssp ---------------HCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHH
T ss_pred ---------------cCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCcccccCCHHHHHHHH
Confidence 34569999999999999999999865 7999999999999999999999999
Q ss_pred HHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCc
Q 045826 285 EKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLR 360 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~ 360 (584)
+.|++.||+++++++|++++. +++++. +|++ +++|.||+|+|.+++. .+++.+++ +.+|+|.||+++|
T Consensus 236 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~~---~g~~--i~~D~Vi~a~G~~p~~---~~l~~~g~~~~~~g~i~vd~~~~ 307 (588)
T 3ics_A 236 EHMKNHDVELVFEDGVDALEENGAVVRLK---SGSV--IQTDMLILAIGVQPES---SLAKGAGLALGVRGTIKVNEKFQ 307 (588)
T ss_dssp HHHHHTTCEEECSCCEEEEEGGGTEEEET---TSCE--EECSEEEECSCEEECC---HHHHHTTCCBCGGGCBCCCTTSB
T ss_pred HHHHHcCCEEEECCeEEEEecCCCEEEEC---CCCE--EEcCEEEEccCCCCCh---HHHHhcCceEcCCCCEEECCccc
Confidence 999999999999999999976 456553 3765 9999999999965543 45677776 5679999999999
Q ss_pred cCCCCCEEEeCcccccc
Q 045826 361 VEGCESVYALGDCATIN 377 (584)
Q Consensus 361 ~~~~~~VfaiGD~a~~~ 377 (584)
| +.|+|||+|||+..+
T Consensus 308 t-~~~~IyA~GD~~~~~ 323 (588)
T 3ics_A 308 T-SDPHIYAIGDAIEVK 323 (588)
T ss_dssp C-SSTTEEECGGGBCEE
T ss_pred c-CCCCEEEeeeeeecc
Confidence 9 899999999999753
No 15
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.2e-36 Score=336.81 Aligned_cols=279 Identities=21% Similarity=0.380 Sum_probs=223.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCCc-cccccccccCc-c-cccHHHHHHHHHcCCcEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTPL-LPSVTNGTVEA-R-SIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p~-~~~~~~g~~~~-~-~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
|++|||||||+||+++|..|++. +++|+|||++++++|.+. ++....+.... . .+...+..+.++.++++ +.+.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~ 79 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEV-RVKH 79 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEE-ETTE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEE-EECC
Confidence 47999999999999999999965 899999999999887653 44444444322 2 23444566666677554 2478
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhc
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERAS 210 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~ 210 (584)
+|+.+|++.+.+.+.+.. +....++.||+||||||+.|..|++||.+ ..++.+++..++..+++.+..
T Consensus 80 ~V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~------ 148 (565)
T 3ntd_A 80 EVVAIDRAAKLVTVRRLL-----DGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM------ 148 (565)
T ss_dssp EEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH------
T ss_pred EEEEEECCCCEEEEEecC-----CCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh------
Confidence 999999999999887632 11124799999999999999999999985 566788888888777665432
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhC
Q 045826 211 LPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRD 290 (584)
Q Consensus 211 ~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~ 290 (584)
..+++++|||||++|+|+|..+.+.+ .+|+++++.+++++.+++++.+.+.+.|++.
T Consensus 149 ---------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~ 205 (565)
T 3ntd_A 149 ---------NNVEHATVVGGGFIGLEMMESLHHLG--------------IKTTLLELADQVMTPVDREMAGFAHQAIRDQ 205 (565)
T ss_dssp ---------TTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHT
T ss_pred ---------CCCCEEEEECCCHHHHHHHHHHHhcC--------------CcEEEEEcCCccchhcCHHHHHHHHHHHHHC
Confidence 34569999999999999999998865 7999999999999999999999999999999
Q ss_pred CcEEEeCCceeEEcC---------------------CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--
Q 045826 291 GIDLKTGSMVVKLSD---------------------KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-- 347 (584)
Q Consensus 291 GV~v~~~~~V~~v~~---------------------~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-- 347 (584)
||++++++.|++++. +.+.+.. .+|++ +++|.||+|+|.+++. .+++..++
T Consensus 206 GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~~--i~~D~vi~a~G~~p~~---~l~~~~g~~~ 279 (565)
T 3ntd_A 206 GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGEL--LETDLLIMAIGVRPET---QLARDAGLAI 279 (565)
T ss_dssp TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSCE--EEESEEEECSCEEECC---HHHHHHTCCB
T ss_pred CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE-cCCCE--EEcCEEEECcCCccch---HHHHhCCccc
Confidence 999999999999864 3344443 44664 9999999999965543 35666676
Q ss_pred cCCCceeeCCCCccCCCCCEEEeCcccccc
Q 045826 348 ANRRVLATDEWLRVEGCESVYALGDCATIN 377 (584)
Q Consensus 348 ~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 377 (584)
+.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 280 ~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~ 308 (565)
T 3ntd_A 280 GELGGIKVNAMMQT-SDPAIYAVGDAVEEQ 308 (565)
T ss_dssp CTTSSBCCCTTCBC-SSTTEEECGGGBCEE
T ss_pred CCCCCEEECCCccc-CCCCEEEeeeeEeec
Confidence 57799999999998 899999999999754
No 16
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=5.9e-37 Score=331.75 Aligned_cols=279 Identities=22% Similarity=0.355 Sum_probs=202.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCCc-cccccccccCc-ccc-------cHHHHHHHHHcCCc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTPL-LPSVTNGTVEA-RSI-------VEPIRNIVRKKGMD 125 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p~-~~~~~~g~~~~-~~i-------~~~~~~~~~~~g~~ 125 (584)
+++|||||||+||+++|..|++. |++|+|||++++++|.+. ++....+.... ..+ ......+.++.+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 57999999999999999999966 899999999999877643 44444444322 222 22333334446644
Q ss_pred EEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHH
Q 045826 126 IQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVID 204 (584)
Q Consensus 126 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~ 204 (584)
+ +.+.+|+.++++.+.+.+.+.. ......+.||+||+|||+.|..|++||.+ +.++.+.+..++..++..+..
T Consensus 83 ~-~~~~~V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~ 156 (472)
T 3iwa_A 83 A-LVETRAHAIDRAAHTVEIENLR-----TGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA 156 (472)
T ss_dssp E-ECSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCT
T ss_pred E-EECCEEEEEECCCCEEEEeecC-----CCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhc
Confidence 3 3578999999999999987621 11124799999999999999999999985 566777888887766544311
Q ss_pred HHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHH-HHHhHhhhCcCCCCCcEEEEecCCccccc-cccHHHHHH
Q 045826 205 CFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDF-VIDDLSKLYPSLKEFTRITLLEAGDHILN-MFDKRITAS 282 (584)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~-~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~~~~~~ 282 (584)
..+++++|||+|++|+|+|..+.++ + .+|+++++.+++++ .+++.+.+.
T Consensus 157 ---------------~~~~~vvViGgG~~g~e~A~~l~~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~ 207 (472)
T 3iwa_A 157 ---------------GEVSKAVIVGGGFIGLEMAVSLADMWG--------------IDTTVVELADQIMPGFTSKSLSQM 207 (472)
T ss_dssp ---------------TSCSEEEEECCSHHHHHHHHHHHHHHC--------------CEEEEECSSSSSSTTTSCHHHHHH
T ss_pred ---------------CCCCEEEEECCCHHHHHHHHHHHHhcC--------------CcEEEEEccCcccccccCHHHHHH
Confidence 2356999999999999999999987 4 79999999999999 899999999
Q ss_pred HHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCC
Q 045826 283 AEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEW 358 (584)
Q Consensus 283 ~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~ 358 (584)
+.+.+++.||+++++++|++++. +.+.+.. .+|++ +++|.||+|+|.+++. .+++.+++ +.+|+|.||++
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~-~~g~~--i~aD~Vv~a~G~~p~~---~l~~~~gl~~~~~g~i~vd~~ 281 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGENGKVARVI-TDKRT--LDADLVILAAGVSPNT---QLARDAGLELDPRGAIIVDTR 281 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEE-ESSCE--EECSEEEECSCEEECC---HHHHHHTCCBCTTCCEECCTT
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccCCeEEEEE-eCCCE--EEcCEEEECCCCCcCH---HHHHhCCccCCCCCCEEECCC
Confidence 99999999999999999999964 3443332 23765 9999999999965543 35666776 56899999999
Q ss_pred CccCCCCCEEEeCcccccc
Q 045826 359 LRVEGCESVYALGDCATIN 377 (584)
Q Consensus 359 l~~~~~~~VfaiGD~a~~~ 377 (584)
+|| +.|+|||+|||+..+
T Consensus 282 ~~t-~~~~Iya~GD~~~~~ 299 (472)
T 3iwa_A 282 MRT-SDPDIFAGGDCVTIP 299 (472)
T ss_dssp CBC-SSTTEEECGGGEEEE
T ss_pred ccc-CCCCEEEeccceecc
Confidence 998 899999999999754
No 17
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=1.8e-36 Score=323.85 Aligned_cols=272 Identities=24% Similarity=0.388 Sum_probs=213.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCCCCCCC-C-ccccccccccCcccccHHHHHHHHHcCCcEEEEE-E
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRNYFAFT-P-LLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKE-A 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~~~~~~-p-~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~-~ 131 (584)
+++|||||||+||+++|..|++.|+ +|+|||+++.+.|. + +...+..+......+...+.+.+.+.+ ++++. .
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~ 81 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQN--IQLLGGT 81 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTT--EEEECSC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCC--CEEEeCC
Confidence 5799999999999999999998888 79999999876653 2 222233343334444444456677777 55655 5
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cc---cccccCHHHHHHHHHHHHHHHH
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EH---AHFLKEVEHAQRIRRSVIDCFE 207 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~---~~~~~~~~~a~~~~~~l~~~~~ 207 (584)
+|+.++++.+.|.+.++. .+.||+||+|||+.|+.+++||.+ +. ++.+++.+++..+++.+
T Consensus 82 ~v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l----- 146 (431)
T 1q1r_A 82 QVTAINRDRQQVILSDGR----------ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL----- 146 (431)
T ss_dssp CEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC-----
T ss_pred EEEEEECCCCEEEECCCC----------EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh-----
Confidence 689999998888876543 799999999999999999999975 33 66678888877665432
Q ss_pred HhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHH
Q 045826 208 RASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEK 286 (584)
Q Consensus 208 ~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~ 286 (584)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++. +++++.+.+.+.
T Consensus 147 ------------~~~~~vvViGgG~~g~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 200 (431)
T 1q1r_A 147 ------------IADNRLVVIGGGYIGLEVAATAIKAN--------------MHVTLLDTAARVLERVTAPPVSAFYEHL 200 (431)
T ss_dssp ------------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHH
T ss_pred ------------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCccccchhhHHHHHHHHHH
Confidence 23569999999999999999998865 799999999999985 899999999999
Q ss_pred HHhCCcEEEeCCceeEEcC----CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccC
Q 045826 287 FKRDGIDLKTGSMVVKLSD----KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVE 362 (584)
Q Consensus 287 L~~~GV~v~~~~~V~~v~~----~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~ 362 (584)
+++.||+++++++|++++. +.+......+|+. +++|.||+|+|++++ . .+++.+++..++.|.||+++||
T Consensus 201 l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~--i~~D~Vv~a~G~~p~--~-~l~~~~gl~~~~gi~Vd~~~~t- 274 (431)
T 1q1r_A 201 HREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR--LPADLVIAGIGLIPN--C-ELASAAGLQVDNGIVINEHMQT- 274 (431)
T ss_dssp HHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE--EECSEEEECCCEEEC--C-HHHHHTTCCBSSSEECCTTSBC-
T ss_pred HHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE--EEcCEEEECCCCCcC--c-chhhccCCCCCCCEEECCCccc-
Confidence 9999999999999999964 3342222244765 999999999996544 3 4677778732344999999998
Q ss_pred CCCCEEEeCcccccc
Q 045826 363 GCESVYALGDCATIN 377 (584)
Q Consensus 363 ~~~~VfaiGD~a~~~ 377 (584)
+.|+|||+|||+..+
T Consensus 275 s~~~IyA~GD~~~~~ 289 (431)
T 1q1r_A 275 SDPLIMAVGDCARFH 289 (431)
T ss_dssp SSTTEEECGGGEEEE
T ss_pred CCCCEEEEEeEEEEc
Confidence 899999999999753
No 18
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=2e-36 Score=325.87 Aligned_cols=276 Identities=21% Similarity=0.363 Sum_probs=217.7
Q ss_pred CeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCCc-ccccccccc---CcccccHHHHHHHHHcCCcEEEEEE
Q 045826 58 KKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTPL-LPSVTNGTV---EARSIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p~-~~~~~~g~~---~~~~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
+||||||||+||+++|..|++. |++|+|||+++.+++.+. ++....+.. ++.++...+.+.+.+.++++ +...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~ 79 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANV-QMRH 79 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEE-EESE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEE-EeCC
Confidence 4899999999999999999976 999999999987776543 232333332 34455556677778888554 2466
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhc
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERAS 210 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~ 210 (584)
+|..++.+.+.|.+.+.. +.+...+.||+||+|||++|..|++||.+ ++++.++++.++.++++..
T Consensus 80 ~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-------- 146 (452)
T 2cdu_A 80 QVTNVDPETKTIKVKDLI-----TNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA-------- 146 (452)
T ss_dssp EEEEEEGGGTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG--------
T ss_pred EEEEEEcCCCEEEEEecC-----CCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh--------
Confidence 799999988999887521 00123799999999999999999999986 4577788888877765532
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-cccHHHHHHHHHHHHh
Q 045826 211 LPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN-MFDKRITASAEEKFKR 289 (584)
Q Consensus 211 ~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~~~~~~~~~~L~~ 289 (584)
..+++++|||+|++|+|+|..+.+++ .+|+++++.+++++ .+++++.+.+.+.|++
T Consensus 147 ---------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 203 (452)
T 2cdu_A 147 ---------PKAKTITIIGSGYIGAELAEAYSNQN--------------YNVNLIDGHERVLYKYFDKEFTDILAKDYEA 203 (452)
T ss_dssp ---------GGCSEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHHH
T ss_pred ---------ccCCeEEEECcCHHHHHHHHHHHhcC--------------CEEEEEEcCCchhhhhhhhhHHHHHHHHHHH
Confidence 24569999999999999999998754 79999999999999 7999999999999999
Q ss_pred CCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHh-CCcCCCceeeCCCCccCCCCC
Q 045826 290 DGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI-GQANRRVLATDEWLRVEGCES 366 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~l~~~g~i~Vd~~l~~~~~~~ 366 (584)
.||+++++++|++++. +.+..... +|++ +++|.||+|+|.+++ . .+++.. .++.+|+|.||+++|| +.|+
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~--i~~D~vv~a~G~~p~--~-~ll~~~l~~~~~G~i~Vd~~~~t-~~~~ 276 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTL-DGKE--IKSDIAILCIGFRPN--T-ELLKGKVAMLDNGAIITDEYMHS-SNRD 276 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEET-TSCE--EEESEEEECCCEEEC--C-GGGTTTSCBCTTSCBCCCTTSBC-SSTT
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCE--EECCEEEECcCCCCC--H-HHHHHhhhcCCCCCEEECCCcCc-CCCC
Confidence 9999999999999964 44543333 4654 999999999996544 3 244444 2357889999999999 8999
Q ss_pred EEEeCcccccc
Q 045826 367 VYALGDCATIN 377 (584)
Q Consensus 367 VfaiGD~a~~~ 377 (584)
|||+|||+..+
T Consensus 277 IyA~GD~~~~~ 287 (452)
T 2cdu_A 277 IFAAGDSAAVH 287 (452)
T ss_dssp EEECSTTBCEE
T ss_pred EEEcceEEEec
Confidence 99999999753
No 19
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=1.4e-36 Score=330.24 Aligned_cols=275 Identities=22% Similarity=0.327 Sum_probs=215.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCC---CeEEEEcCCCCCCCCCc-cccccccc-cCcccccHHHHHHHHHcCCcEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNS---FEVQVVSPRNYFAFTPL-LPSVTNGT-VEARSIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g---~~V~lid~~~~~~~~p~-~~~~~~g~-~~~~~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
++||||||||+||+++|..|++.| .+|+|||+++.+++.+. ++....+. ..++++..+..+.+++.++++ +...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v-~~~~ 113 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKV-YMES 113 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEE-ETTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEE-EeCC
Confidence 489999999999999999999776 99999999987776543 22222333 234445555667777787543 2466
Q ss_pred EEEEEecCCCEEEEe-ecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc------------cccccccCHHHHHHH
Q 045826 132 ECYKIDAEKKQIYCR-TTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV------------EHAHFLKEVEHAQRI 198 (584)
Q Consensus 132 ~v~~id~~~~~v~~~-~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~------------~~~~~~~~~~~a~~~ 198 (584)
+|..|+.+.+.|.+. ++. ...+.||+||+|||++|..|++||.+ ++++.++++.++..+
T Consensus 114 ~v~~i~~~~~~v~v~~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~ 185 (490)
T 2bc0_A 114 PVQSIDYDAKTVTALVDGK--------NHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADV 185 (490)
T ss_dssp CEEEEETTTTEEEEEETTE--------EEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHH
T ss_pred EEEEEECCCCEEEEEeCCc--------EEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHH
Confidence 799999999998886 321 13799999999999999999999975 356777888887776
Q ss_pred HHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-cccH
Q 045826 199 RRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN-MFDK 277 (584)
Q Consensus 199 ~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~ 277 (584)
++.+. ...+++++|||||++|+|+|..|++.+ .+|+++++.+++++ .+++
T Consensus 186 ~~~~~---------------~~~~~~vvVIGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~ 236 (490)
T 2bc0_A 186 IAKLE---------------NKDIKRVAVVGAGYIGVELAEAFQRKG--------------KEVVLIDVVDTCLAGYYDR 236 (490)
T ss_dssp HHHTT---------------STTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCH
T ss_pred HHHhh---------------hcCCceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEcccchhhhHHHH
Confidence 55420 024569999999999999999998865 79999999999999 7999
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEcCCe-EE-EEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHh-CCcCCCcee
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLSDKE-IS-TKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI-GQANRRVLA 354 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~-v~-~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~l~~~g~i~ 354 (584)
++.+.+.+.|++.||+++++++|++++.++ +. +.. +|++ +++|.||||+|.+++ + .+++.. .++.+|+|.
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~--~g~~--i~~D~Vi~a~G~~p~--~-~ll~~~l~~~~~G~I~ 309 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT--DKNE--YDVDMVILAVGFRPN--T-TLGNGKIDLFRNGAFL 309 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE--SSCE--EECSEEEECCCEEEC--C-GGGTTCSCBCTTSCBC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE--CCcE--EECCEEEECCCCCcC--h-HHHHhhhccCCCCCEE
Confidence 999999999999999999999999997653 21 222 3654 999999999996554 3 244443 335688999
Q ss_pred eCCCCccCCCCCEEEeCcccccc
Q 045826 355 TDEWLRVEGCESVYALGDCATIN 377 (584)
Q Consensus 355 Vd~~l~~~~~~~VfaiGD~a~~~ 377 (584)
||+++|| +.|+|||+|||+..+
T Consensus 310 Vd~~~~t-~~~~IyA~GD~~~~~ 331 (490)
T 2bc0_A 310 VNKRQET-SIPGVYAIGDCATIY 331 (490)
T ss_dssp CCTTCBC-SSTTEEECGGGBCEE
T ss_pred ECCCccc-CCCCEEEeeeeEEec
Confidence 9999999 899999999999753
No 20
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.5e-36 Score=323.63 Aligned_cols=274 Identities=26% Similarity=0.407 Sum_probs=203.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCC-ccccccccccCcccccHHHH-HHHHHcCCcEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTP-LLPSVTNGTVEARSIVEPIR-NIVRKKGMDIQFKEA 131 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p-~~~~~~~g~~~~~~i~~~~~-~~~~~~g~~v~~~~~ 131 (584)
++++|||||||+||+++|..|++. +++|+|||+++++.+.+ .++....+.....++..... .+.++.++ +++.+
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi--~v~~~ 79 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGI--DLHLN 79 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTC--EEETT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCc--EEEec
Confidence 357999999999999999999965 89999999999887765 34444444434444433333 33356774 45544
Q ss_pred -EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHh
Q 045826 132 -ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERA 209 (584)
Q Consensus 132 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~ 209 (584)
+|+.++.+.+.+.+.++ ...+.||+||+|||+.|+.|++||.+ +.++..++..++..++..+.
T Consensus 80 ~~v~~i~~~~~~v~~~~g---------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~------ 144 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRENGG---------EKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYME------ 144 (449)
T ss_dssp CEEEEECSSEEEEECSSS---------EEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHS------
T ss_pred CEEEEEecCCCEEEECCc---------eEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH------
Confidence 89999988766654322 23799999999999999999999986 45666777777776654421
Q ss_pred cCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHH
Q 045826 210 SLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFK 288 (584)
Q Consensus 210 ~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~ 288 (584)
...+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++. +++++.+.+.+.++
T Consensus 145 ---------~~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~ 201 (449)
T 3kd9_A 145 ---------KYKVENVVIIGGGYIGIEMAEAFAAQG--------------KNVTMIVRGERVLRRSFDKEVTDILEEKLK 201 (449)
T ss_dssp ---------SSCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHHT
T ss_pred ---------hcCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHH
Confidence 024569999999999999999998865 799999999999997 99999999999999
Q ss_pred hCCcEEEeCCceeEEcCCe-EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCccCCCC
Q 045826 289 RDGIDLKTGSMVVKLSDKE-ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVEGCE 365 (584)
Q Consensus 289 ~~GV~v~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~~~~~~ 365 (584)
+. |++++++.|++++.++ +.... .+|++ +++|.||+|+|.+++ . .+++.+++ +.+|+|.||+++|| +.|
T Consensus 202 ~~-v~i~~~~~v~~i~~~~~v~~v~-~~g~~--i~~D~Vv~a~G~~p~--~-~l~~~~gl~~~~~G~i~vd~~~~t-~~~ 273 (449)
T 3kd9_A 202 KH-VNLRLQEITMKIEGEERVEKVV-TDAGE--YKAELVILATGIKPN--I-ELAKQLGVRIGETGAIWTNEKMQT-SVE 273 (449)
T ss_dssp TT-SEEEESCCEEEEECSSSCCEEE-ETTEE--EECSEEEECSCEEEC--C-HHHHHTTCCBCTTSSBCCCTTCBC-SST
T ss_pred hC-cEEEeCCeEEEEeccCcEEEEE-eCCCE--EECCEEEEeeCCccC--H-HHHHhCCccCCCCCCEEECCCCcc-CCC
Confidence 99 9999999999997653 32111 12654 999999999996544 3 46677776 56789999999998 899
Q ss_pred CEEEeCcccccc
Q 045826 366 SVYALGDCATIN 377 (584)
Q Consensus 366 ~VfaiGD~a~~~ 377 (584)
+|||+|||+..+
T Consensus 274 ~IyA~GD~~~~~ 285 (449)
T 3kd9_A 274 NVYAAGDVAETR 285 (449)
T ss_dssp TEEECSTTBCEE
T ss_pred CEEEeeeeeeec
Confidence 999999999753
No 21
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=1.3e-35 Score=321.71 Aligned_cols=278 Identities=24% Similarity=0.433 Sum_probs=215.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCCc-ccccccccc-CcccccHHHHHHH-HHcCCcEEEE-E
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTPL-LPSVTNGTV-EARSIVEPIRNIV-RKKGMDIQFK-E 130 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p~-~~~~~~g~~-~~~~i~~~~~~~~-~~~g~~v~~~-~ 130 (584)
++||||||||+||+++|..|++. |.+|+|||+++.+.|.+. ++....+.. +..++.....+.+ +..+++ ++ .
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~--~~~~ 113 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGID--AKVR 113 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCE--EESS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCE--EEeC
Confidence 57999999999999999999964 899999999988776543 443333332 2334443334444 445644 44 4
Q ss_pred EEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHh
Q 045826 131 AECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERA 209 (584)
Q Consensus 131 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~ 209 (584)
.+|+.++.+.+.|.+.+.. +.+...+.||+||+|||+.|..|++||.+ ++++.+++.+++.++++.+.+
T Consensus 114 ~~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~----- 183 (480)
T 3cgb_A 114 HEVTKVDTEKKIVYAEHTK-----TKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET----- 183 (480)
T ss_dssp EEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS-----
T ss_pred CEEEEEECCCCEEEEEEcC-----CCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh-----
Confidence 7899999999999887511 01123699999999999999999999986 456778888888877665421
Q ss_pred cCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHh
Q 045826 210 SLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKR 289 (584)
Q Consensus 210 ~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~ 289 (584)
..+++++|||+|++|+|+|..+.+++ .+|+++++.+++++.+++++.+.+.+.+++
T Consensus 184 ----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 239 (480)
T 3cgb_A 184 ----------NKVEDVTIIGGGAIGLEMAETFVELG--------------KKVRMIERNDHIGTIYDGDMAEYIYKEADK 239 (480)
T ss_dssp ----------SCCCEEEEECCHHHHHHHHHHHHHTT--------------CEEEEECCGGGTTSSSCHHHHHHHHHHHHH
T ss_pred ----------cCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCchhhcCCHHHHHHHHHHHHH
Confidence 14569999999999999999998865 799999999999999999999999999999
Q ss_pred CCcEEEeCCceeEEcCCe-EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCccCCCCC
Q 045826 290 DGIDLKTGSMVVKLSDKE-ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVEGCES 366 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~~~~~~~ 366 (584)
.||+++++++|++++.++ +.....+ +. ++++|.||+|+|.+++. .+++..++ +.+|+|.||+++|| +.|+
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~--~i~~D~vi~a~G~~p~~---~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~ 312 (480)
T 3cgb_A 240 HHIEILTNENVKAFKGNERVEAVETD-KG--TYKADLVLVSVGVKPNT---DFLEGTNIRTNHKGAIEVNAYMQT-NVQD 312 (480)
T ss_dssp TTCEEECSCCEEEEEESSBEEEEEET-TE--EEECSEEEECSCEEESC---GGGTTSCCCBCTTSCBCCCTTSBC-SSTT
T ss_pred cCcEEEcCCEEEEEEcCCcEEEEEEC-CC--EEEcCEEEECcCCCcCh---HHHHhCCcccCCCCCEEECCCccC-CCCC
Confidence 999999999999997543 4322222 44 39999999999965543 35556665 56789999999999 7999
Q ss_pred EEEeCcccccc
Q 045826 367 VYALGDCATIN 377 (584)
Q Consensus 367 VfaiGD~a~~~ 377 (584)
|||+|||+..+
T Consensus 313 IyA~GD~~~~~ 323 (480)
T 3cgb_A 313 VYAAGDCATHY 323 (480)
T ss_dssp EEECGGGBCEE
T ss_pred EEEeeeEEEec
Confidence 99999999753
No 22
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.4e-35 Score=312.39 Aligned_cols=268 Identities=19% Similarity=0.363 Sum_probs=211.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCC--CeEEEEcCCCCCCCC-CccccccccccCcccccH-HHHHHHHHcCCcEEEE-EE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNS--FEVQVVSPRNYFAFT-PLLPSVTNGTVEARSIVE-PIRNIVRKKGMDIQFK-EA 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g--~~V~lid~~~~~~~~-p~~~~~~~g~~~~~~i~~-~~~~~~~~~g~~v~~~-~~ 131 (584)
++||||||||+||+++|..|++.| .+|+|||+++...|. ++++....+.....++.. .+..++++.++ +++ ..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~ 81 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNA--RILTHT 81 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTC--EEECSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCc--EEEeCC
Confidence 579999999999999999999887 569999998754442 344443333333333333 35666677774 455 56
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhc
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERAS 210 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~ 210 (584)
+|..++++.++|.+.+ ..+.||+||+|||+.|..|++||.. ++++..+++.++..++..+
T Consensus 82 ~v~~i~~~~~~v~~~~-----------~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-------- 142 (384)
T 2v3a_A 82 RVTGIDPGHQRIWIGE-----------EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA-------- 142 (384)
T ss_dssp CCCEEEGGGTEEEETT-----------EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH--------
T ss_pred EEEEEECCCCEEEECC-----------cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh--------
Confidence 7899999888887642 1799999999999999999999976 5677888888877665543
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHHh
Q 045826 211 LPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFKR 289 (584)
Q Consensus 211 ~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~~ 289 (584)
..+++++|||+|++|+|+|..+.+.+ .+|+++++.+++++. +++.+.+.+.+.+++
T Consensus 143 ---------~~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~ 199 (384)
T 2v3a_A 143 ---------AGKRRVLLLGAGLIGCEFANDLSSGG--------------YQLDVVAPCEQVMPGLLHPAAAKAVQAGLEG 199 (384)
T ss_dssp ---------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHHHHT
T ss_pred ---------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCcchhhcccCHHHHHHHHHHHHH
Confidence 23469999999999999999999865 799999999999987 489999999999999
Q ss_pred CCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC-cCCCceeeCCCCccCCCCC
Q 045826 290 DGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLATDEWLRVEGCES 366 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~Vd~~l~~~~~~~ 366 (584)
.||+++++++|++++. +++.+.. .+|++ +++|.||+|+|.+++ . .+++.+++ .++| |.||+++|| +.|+
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~~--i~~d~vv~a~G~~p~--~-~l~~~~g~~~~~g-i~vd~~~~t-~~~~ 271 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHL-SDGEV--IPCDLVVSAVGLRPR--T-ELAFAAGLAVNRG-IVVDRSLRT-SHAN 271 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSCEEEC--C-HHHHHTTCCBSSS-EEECTTCBC-SSTT
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEECcCCCcC--H-HHHHHCCCCCCCC-EEECCCCCC-CCCC
Confidence 9999999999999963 3444443 34765 999999999995444 4 36677777 3456 999999998 8999
Q ss_pred EEEeCccccc
Q 045826 367 VYALGDCATI 376 (584)
Q Consensus 367 VfaiGD~a~~ 376 (584)
|||+|||+..
T Consensus 272 IyA~GD~~~~ 281 (384)
T 2v3a_A 272 IYALGDCAEV 281 (384)
T ss_dssp EEECGGGEEE
T ss_pred EEEeeeeeeE
Confidence 9999999964
No 23
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=3.3e-36 Score=324.01 Aligned_cols=273 Identities=19% Similarity=0.323 Sum_probs=205.7
Q ss_pred CeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCCc-ccccccccc-CcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 58 KKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTPL-LPSVTNGTV-EARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p~-~~~~~~g~~-~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
+||||||||+||+++|..|++. +++|+|||++++++|.+. ++....+.. ...++.....+.+.+.++++ +...+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~-~~~~~V 81 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQL-LLNREV 81 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEE-ECSCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEE-EECCEE
Confidence 6999999999999999999966 899999999998887653 333333332 23444444566777787443 257899
Q ss_pred EEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhcCC
Q 045826 134 YKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERASLP 212 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 212 (584)
+.+|++.+.+.+.... +...+.||+||+|||++|..|++||.+ +.++..+++.++..+....
T Consensus 82 ~~id~~~~~v~v~~~~-------~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---------- 144 (452)
T 3oc4_A 82 VAMDVENQLIAWTRKE-------EQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL---------- 144 (452)
T ss_dssp EEEETTTTEEEEEETT-------EEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH----------
T ss_pred EEEECCCCEEEEEecC-------ceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH----------
Confidence 9999999999885111 124899999999999999999999986 3455555555544433221
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHHHHHHHHHHHhCC
Q 045826 213 NLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRITASAEEKFKRDG 291 (584)
Q Consensus 213 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~~~~~~~~L~~~G 291 (584)
..+++++|||+|++|+|+|..+.+++ .+|+++++.+++++. +++++.+.+.+.|++.|
T Consensus 145 -------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~G 203 (452)
T 3oc4_A 145 -------ENSQTVAVIGAGPIGMEAIDFLVKMK--------------KTVHVFESLENLLPKYFDKEMVAEVQKSLEKQA 203 (452)
T ss_dssp -------HTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTT
T ss_pred -------hcCCEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEccCccccccCCHHHHHHHHHHHHHcC
Confidence 24569999999999999999998865 799999999999986 89999999999999999
Q ss_pred cEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHH-hCCcCCCceeeCCCCccCCCCCEE
Q 045826 292 IDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ-IGQANRRVLATDEWLRVEGCESVY 368 (584)
Q Consensus 292 V~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~l~~~g~i~Vd~~l~~~~~~~Vf 368 (584)
|+++++++|++++ ++++.+.. ++| + +++|.||+|+|.+++. .+++. +.++.+|+|.||+++|| +.|+||
T Consensus 204 V~i~~~~~v~~i~~~~~~v~v~~-~~g-~--i~aD~Vv~A~G~~p~~---~~l~~~~~~~~~g~i~vd~~~~t-~~~~Iy 275 (452)
T 3oc4_A 204 VIFHFEETVLGIEETANGIVLET-SEQ-E--ISCDSGIFALNLHPQL---AYLDKKIQRNLDQTIAVDAYLQT-SVPNVF 275 (452)
T ss_dssp EEEEETCCEEEEEECSSCEEEEE-SSC-E--EEESEEEECSCCBCCC---SSCCTTSCBCTTSCBCCCTTCBC-SSTTEE
T ss_pred CEEEeCCEEEEEEccCCeEEEEE-CCC-E--EEeCEEEECcCCCCCh---HHHHhhhccCCCCCEEECcCccC-CCCCEE
Confidence 9999999999997 45564443 334 3 9999999999965543 23222 34467899999999999 899999
Q ss_pred EeCcccccc
Q 045826 369 ALGDCATIN 377 (584)
Q Consensus 369 aiGD~a~~~ 377 (584)
|+|||+..+
T Consensus 276 A~GD~~~~~ 284 (452)
T 3oc4_A 276 AIGDCISVM 284 (452)
T ss_dssp ECGGGBCEE
T ss_pred EEEeeEEec
Confidence 999999753
No 24
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=2.2e-35 Score=317.20 Aligned_cols=277 Identities=22% Similarity=0.380 Sum_probs=215.3
Q ss_pred CeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCCc-ccccccccc-CcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 58 KKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTPL-LPSVTNGTV-EARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p~-~~~~~~g~~-~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
+||||||||+||+++|..|++. |.+|+|||+++.++|.+. ++....+.. +.+++...+.+.+.+.++++ +....|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~-~~~~~v 79 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNV-FSNTEI 79 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEE-EETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEE-EECCEE
Confidence 4899999999999999999975 999999999988776543 333333332 34455555667777777554 257889
Q ss_pred EEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhcCC
Q 045826 134 YKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERASLP 212 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 212 (584)
..++.+.+.|.+.+.. +.+..++.||+||+|||++|..|++||.+ ++++.+++.+++..+++.+.+
T Consensus 80 ~~i~~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~-------- 146 (447)
T 1nhp_A 80 TAIQPKEHQVTVKDLV-----SGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVD-------- 146 (447)
T ss_dssp EEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTC--------
T ss_pred EEEeCCCCEEEEEecC-----CCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhh--------
Confidence 9999999999887511 01113589999999999999999999986 456777788887776654310
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-cccHHHHHHHHHHHHhCC
Q 045826 213 NLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN-MFDKRITASAEEKFKRDG 291 (584)
Q Consensus 213 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-~~~~~~~~~~~~~L~~~G 291 (584)
..+++++|||+|++|+|+|..+++.+ .+|+++++.+++++ .+++++.+.+.+.+++.|
T Consensus 147 -------~~~~~vvIiG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~g 205 (447)
T 1nhp_A 147 -------PEVNNVVVIGSGYIGIEAAEAFAKAG--------------KKVTVIDILDRPLGVYLDKEFTDVLTEEMEANN 205 (447)
T ss_dssp -------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTT
T ss_pred -------cCCCeEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCcccccccCCHHHHHHHHHHHHhCC
Confidence 13469999999999999999998864 79999999999998 689999999999999999
Q ss_pred cEEEeCCceeEEcCCe-E-EEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHh-CCcCCCceeeCCCCccCCCCCEE
Q 045826 292 IDLKTGSMVVKLSDKE-I-STKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI-GQANRRVLATDEWLRVEGCESVY 368 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~-v-~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~l~~~g~i~Vd~~l~~~~~~~Vf 368 (584)
|+++++++|++++.++ + .+.. +|++ +++|.||+|+|.+++ . .+++.. .++.+|+|.||+++|| +.|+||
T Consensus 206 v~i~~~~~v~~i~~~~~v~~v~~--~~~~--i~~d~vi~a~G~~p~--~-~~~~~~~~~~~~G~i~Vd~~~~t-~~~~Iy 277 (447)
T 1nhp_A 206 ITIATGETVERYEGDGRVQKVVT--DKNA--YDADLVVVAVGVRPN--T-AWLKGTLELHPNGLIKTDEYMRT-SEPDVF 277 (447)
T ss_dssp EEEEESCCEEEEECSSBCCEEEE--SSCE--EECSEEEECSCEEES--C-GGGTTTSCBCTTSCBCCCTTCBC-SSTTEE
T ss_pred CEEEcCCEEEEEEccCcEEEEEE--CCCE--EECCEEEECcCCCCC--h-HHHHhhhhhcCCCcEEECccccC-CCCCEE
Confidence 9999999999997653 3 1222 2544 999999999996544 3 233333 3356789999999999 899999
Q ss_pred EeCcccccc
Q 045826 369 ALGDCATIN 377 (584)
Q Consensus 369 aiGD~a~~~ 377 (584)
|+|||+..+
T Consensus 278 a~GD~~~~~ 286 (447)
T 1nhp_A 278 AVGDATLIK 286 (447)
T ss_dssp ECGGGSCEE
T ss_pred EeeeEEEee
Confidence 999999753
No 25
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=5.7e-35 Score=301.47 Aligned_cols=269 Identities=17% Similarity=0.170 Sum_probs=196.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc-------ccccc-cccCcccccHHHHHHHHHcCCcEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL-------PSVTN-GTVEARSIVEPIRNIVRKKGMDIQF 128 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~-------~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~ 128 (584)
+++|+|||||+||+++|..|++.|++|+|||+++.+++.+.. +..+. ......++...+.+.+.+.++++ +
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~ 83 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY-S 83 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE-E
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE-E
Confidence 579999999999999999999999999999999876543210 11110 01122345556667777777554 3
Q ss_pred EEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCC---CCCCCCCCCcccccc-cc-cCHHHHHHHHHHHH
Q 045826 129 KEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA---QANTFNTPGVVEHAH-FL-KEVEHAQRIRRSVI 203 (584)
Q Consensus 129 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs---~~~~~~ipG~~~~~~-~~-~~~~~a~~~~~~l~ 203 (584)
.+.+|+.++.+.+.+.+....+ ..+.||+||+|+|+ .|..+++||..++.. .+ ..+.
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g--------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~---------- 145 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQG--------NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVK---------- 145 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTS--------CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCS----------
T ss_pred eCCEEEEEEECCCEEEEEECCC--------CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecC----------
Confidence 4678999988765555543221 17999999999999 577778888643210 00 0000
Q ss_pred HHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHH
Q 045826 204 DCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASA 283 (584)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~ 283 (584)
......+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+++. +...+.+
T Consensus 146 ------------~~~~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~v~~~~~~~~~--~~~~~~l 197 (335)
T 2zbw_A 146 ------------SKAEFQGKRVLIVGGGDSAVDWALNLLDTA--------------RRITLIHRRPQFRAH--EASVKEL 197 (335)
T ss_dssp ------------CGGGGTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCCSC--HHHHHHH
T ss_pred ------------chhhcCCCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEcCCccCcc--HHHHHHH
Confidence 001124579999999999999999987653 799999999987664 5677888
Q ss_pred HHHHHhCCcEEEeCCceeEEcCC----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC-cCCCceeeCCC
Q 045826 284 EEKFKRDGIDLKTGSMVVKLSDK----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLATDEW 358 (584)
Q Consensus 284 ~~~L~~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~Vd~~ 358 (584)
.+.+++.||++++++.|++++.+ .+.+....+|+..++++|.||+|+|++++. .+++.+++ .++|+|.||++
T Consensus 198 ~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~~~~~~~g~i~vd~~ 274 (335)
T 2zbw_A 198 MKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKL---GPLANWGLALEKNKIKVDTT 274 (335)
T ss_dssp HHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEEC---GGGGGSCCCEETTEEECCTT
T ss_pred HhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCc---hHhhhcceeccCCeeeeCCC
Confidence 88999999999999999999765 466664334754469999999999965543 35566666 24789999999
Q ss_pred CccCCCCCEEEeCccccc
Q 045826 359 LRVEGCESVYALGDCATI 376 (584)
Q Consensus 359 l~~~~~~~VfaiGD~a~~ 376 (584)
+|+ +.|+|||+|||+..
T Consensus 275 ~~t-~~~~vya~GD~~~~ 291 (335)
T 2zbw_A 275 MAT-SIPGVYACGDIVTY 291 (335)
T ss_dssp CBC-SSTTEEECSTTEEC
T ss_pred CCC-CCCCEEEecccccc
Confidence 998 89999999999874
No 26
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=2.6e-35 Score=318.97 Aligned_cols=269 Identities=17% Similarity=0.248 Sum_probs=196.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc----------------------ccc------cC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT----------------------NGT------VE 107 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~----------------------~g~------~~ 107 (584)
.++||||||||+||+++|..|++.|++|+|||+++.+++......+. .|. .+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 35799999999999999999999999999999998765532111000 010 01
Q ss_pred cccc-----------cHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 108 ARSI-----------VEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 108 ~~~i-----------~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
...+ ...+...+++.+ ++++.+++..+|.. .+.+.... + +..++.||+||+|||+.|..
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~~--~~~v~~~~-----g-g~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNK--VVHVNGYGKITGKN--QVTATKAD-----G-GTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEEEETT--EEEEECTT-----S-CEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEecCC--EEEEEecC-----C-CcEEEEeCEEEECCCCCCCC
Confidence 1111 112345566666 55777888778754 44443221 0 01379999999999999999
Q ss_pred CCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCC
Q 045826 177 FNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSL 256 (584)
Q Consensus 177 ~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~ 256 (584)
|++||.+.. .+.+..++.. +. ...++++|||+|++|+|+|..+.+++
T Consensus 155 p~i~g~~~~--~v~t~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~g----------- 201 (474)
T 1zmd_A 155 FPGITIDED--TIVSSTGALS-------------LK-------KVPEKMVVIGAGVIGVELGSVWQRLG----------- 201 (474)
T ss_dssp CTTCCCCSS--SEECHHHHTT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHTT-----------
T ss_pred CCCCCCCcC--cEEcHHHHhh-------------cc-------ccCceEEEECCCHHHHHHHHHHHHcC-----------
Confidence 999987542 1223332211 11 12469999999999999999998865
Q ss_pred CCCcEEEEecCCccccc-cccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--e-EEEEe----CCCCeEEEEecceEEE
Q 045826 257 KEFTRITLLEAGDHILN-MFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--E-ISTKD----RATGQISSIPYGMVVW 328 (584)
Q Consensus 257 ~~~~~V~lv~~~~~il~-~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~----~~~G~~~~i~~D~vI~ 328 (584)
.+|+++++.+++++ .+++++.+.+.+.|++.||+++++++|++++.+ + +.+.. ..+++ ++++|.||+
T Consensus 202 ---~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~--~i~~D~vv~ 276 (474)
T 1zmd_A 202 ---ADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAE--VITCDVLLV 276 (474)
T ss_dssp ---CEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCE--EEEESEEEE
T ss_pred ---CEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCce--EEEcCEEEE
Confidence 79999999999999 899999999999999999999999999999643 3 55441 22344 499999999
Q ss_pred ccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 329 STGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 329 a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|+|.+++ +..+ ++++++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 277 a~G~~p~--~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 323 (474)
T 1zmd_A 277 CIGRRPF--TKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVA 323 (474)
T ss_dssp CSCEEEC--CTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSS
T ss_pred CcCCCcC--CCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCC
Confidence 9996544 3222 556666 56789999999998 8999999999985
No 27
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.1e-34 Score=296.82 Aligned_cols=263 Identities=19% Similarity=0.280 Sum_probs=193.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc----cccccc-cccCcccccHHHHHHHHHcCCcEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL----LPSVTN-GTVEARSIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~----~~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
++||+|||||+||+++|..|++.|++|+|||++ .++... .+..+. ......++...+.+.+.+.++++. ..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 90 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVL--LD 90 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEE--ES
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEE--EE
Confidence 579999999999999999999999999999998 333221 111111 112234566677788888886654 48
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccc---cccccCHHHHHHHHHHHHHHHHH
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEH---AHFLKEVEHAQRIRRSVIDCFER 208 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~l~~~~~~ 208 (584)
+|..++.+++.+.+....+ ..+.||+||+|+|+.|..+.+||..++ ........+
T Consensus 91 ~v~~i~~~~~~~~v~~~~g--------~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~-------------- 148 (323)
T 3f8d_A 91 IVEKIENRGDEFVVKTKRK--------GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVAD-------------- 148 (323)
T ss_dssp CEEEEEEC--CEEEEESSS--------CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHH--------------
T ss_pred EEEEEEecCCEEEEEECCC--------CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCC--------------
Confidence 9999998876555544321 289999999999999999999997642 111111100
Q ss_pred hcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHH
Q 045826 209 ASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFK 288 (584)
Q Consensus 209 ~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~ 288 (584)
.....+++++|||+|++|+|+|..|.+.+ .+|+++++.+++++ ++. ...+.++
T Consensus 149 --------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~--~~~---~~~~~~~ 201 (323)
T 3f8d_A 149 --------APLFKNRVVAVIGGGDSALEGAEILSSYS--------------TKVYLIHRRDTFKA--QPI---YVETVKK 201 (323)
T ss_dssp --------GGGGTTCEEEEECCSHHHHHHHHHHHHHS--------------SEEEEECSSSSCCS--CHH---HHHHHHT
T ss_pred --------HhHcCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEeCCCCCc--CHH---HHHHHHh
Confidence 01134569999999999999999998864 79999999998877 232 2333334
Q ss_pred hCCcEEEeCCceeEEcCC----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCccC
Q 045826 289 RDGIDLKTGSMVVKLSDK----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVE 362 (584)
Q Consensus 289 ~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~~~ 362 (584)
+.||+++++++|++++.+ ++++.+..+|+..++++|.||+|+|+.++ . .+++.+++ +.+|+|.||+++++
T Consensus 202 ~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~--~-~~~~~~g~~~~~~g~i~vd~~~~t- 277 (323)
T 3f8d_A 202 KPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPP--T-DFAKSNGIETDTNGYIKVDEWMRT- 277 (323)
T ss_dssp CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECC--H-HHHHHTTCCBCTTSSBCCCTTCBC-
T ss_pred CCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCC--h-hHHhhcCeeecCCCcEecCCCcee-
Confidence 559999999999999765 36776655577556999999999996554 3 45666766 67899999999998
Q ss_pred CCCCEEEeCccccc
Q 045826 363 GCESVYALGDCATI 376 (584)
Q Consensus 363 ~~~~VfaiGD~a~~ 376 (584)
+.|+|||+|||+..
T Consensus 278 ~~~~vya~GD~~~~ 291 (323)
T 3f8d_A 278 SVPGVFAAGDCTSA 291 (323)
T ss_dssp SSTTEEECSTTBST
T ss_pred cCCCEEEcceecCC
Confidence 89999999999863
No 28
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=6e-35 Score=315.64 Aligned_cols=270 Identities=18% Similarity=0.250 Sum_probs=195.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc---------------------cc-------ccCc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT---------------------NG-------TVEA 108 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~---------------------~g-------~~~~ 108 (584)
++||||||||+||+++|..|++.|++|+|||+++.+++......+. .| ..+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999998776542211100 00 0111
Q ss_pred cc-----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 109 RS-----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 109 ~~-----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
.. +...+...+++.+ ++++.+++..++.. .+.+....+ +...+.||+||+|||+.|..|
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~--v~~~~g~~~~i~~~--~~~v~~~~G------~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNK--VTYYKGEGSFETAH--SIRVNGLDG------KQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEEEEETT--EEEEEETTS------CEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeCC--EEEEEecCC------ceEEEEcCEEEECCCCCcCCC
Confidence 11 1112345566666 55677777778765 444432211 113799999999999999988
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCC
Q 045826 178 NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLK 257 (584)
Q Consensus 178 ~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~ 257 (584)
+++|.+.. .+.+..++..+ . ..+++++|||+|++|+|+|..+.+++
T Consensus 152 ~~~g~~~~--~v~t~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~g------------ 197 (468)
T 2qae_A 152 PFLPFDEK--VVLSSTGALAL-------------P-------RVPKTMVVIGGGVIGLELGSVWARLG------------ 197 (468)
T ss_dssp TTBCCCSS--SEECHHHHHTC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHTT------------
T ss_pred CCCCCCcC--ceechHHHhhc-------------c-------cCCceEEEECCCHHHHHHHHHHHHhC------------
Confidence 88887531 23344333221 1 13469999999999999999998865
Q ss_pred CCcEEEEecCCccccccccHHHHHHHHHHH-HhCCcEEEeCCceeEEcCC--eEEEEeC-CCCeEEEEecceEEEccCCC
Q 045826 258 EFTRITLLEAGDHILNMFDKRITASAEEKF-KRDGIDLKTGSMVVKLSDK--EISTKDR-ATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 258 ~~~~V~lv~~~~~il~~~~~~~~~~~~~~L-~~~GV~v~~~~~V~~v~~~--~v~~~~~-~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+|+++++.+++++.+++++.+.+.+.| ++.||+++++++|++++.+ ++.+... .+|+..++++|.||+|+|.+
T Consensus 198 --~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 198 --AEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred --CEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 7999999999999999999999999999 9999999999999999643 3443321 13643359999999999965
Q ss_pred CCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 334 TRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 334 ~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
++ ...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 276 p~--~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 317 (468)
T 2qae_A 276 PF--TGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVD 317 (468)
T ss_dssp EC--CTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBS
T ss_pred cC--CCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCC
Confidence 54 3222 566666 56789999999998 8999999999985
No 29
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.7e-35 Score=318.17 Aligned_cols=267 Identities=21% Similarity=0.276 Sum_probs=197.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccccc---------------------ccCccccc---
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNG---------------------TVEARSIV--- 112 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g---------------------~~~~~~i~--- 112 (584)
.+||+|||||+||+++|..|++.|++|+|||+++.+++......+.+. ..+...+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 479999999999999999999999999999988877765332211110 01111111
Q ss_pred ---------HHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc
Q 045826 113 ---------EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV 183 (584)
Q Consensus 113 ---------~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~ 183 (584)
..+..++++.+ ++++.+++..+++....|...++. ..++.||+||+|||+.|..|++||.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~--v~~~~g~v~~id~~~~~V~~~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~~ 153 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYET--LTFYKGYVKIKDPTHVIVKTDEGK--------EIEAETRYMIIASGAETAKLRLPGVE 153 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTT--EEEESEEEEEEETTEEEEEETTSC--------EEEEEEEEEEECCCEEECCCCCTTGG
T ss_pred HhheeccccchHHHHHHhCC--CEEEEeEEEEecCCeEEEEcCCCc--------EEEEecCEEEECCCCCccCCCCCCcc
Confidence 22233334444 778899999999775455443321 12399999999999999999999976
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEE
Q 045826 184 EHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRIT 263 (584)
Q Consensus 184 ~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~ 263 (584)
. +.+..++..+++ .+. ..+++++|||+|++|+|+|..+.+++ .+|+
T Consensus 154 -~---~~t~~~~~~~~~---------~l~-------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vt 199 (466)
T 3l8k_A 154 -Y---CLTSDDIFGYKT---------SFR-------KLPQDMVIIGAGYIGLEIASIFRLMG--------------VQTH 199 (466)
T ss_dssp -G---SBCHHHHHSTTC---------SCC-------SCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEE
T ss_pred -c---eEeHHHHHHHHH---------HHh-------hCCCeEEEECCCHHHHHHHHHHHHcC--------------CEEE
Confidence 2 444444332111 111 23469999999999999999999865 7999
Q ss_pred EecCCccccccc-cHHHHHHHHHHHHhCCcEEEeCCceeEEcC---CeEEEEeCC-CCeEEEEecceEEEccCCCCCchH
Q 045826 264 LLEAGDHILNMF-DKRITASAEEKFKRDGIDLKTGSMVVKLSD---KEISTKDRA-TGQISSIPYGMVVWSTGIGTRPVI 338 (584)
Q Consensus 264 lv~~~~~il~~~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~v~~~~~~-~G~~~~i~~D~vI~a~G~~~~p~~ 338 (584)
++++.+++++.+ ++++.+.+.+.|+ |+++++++|++++. +++.+.... +|+..++++|.||+|+|.+++ .
T Consensus 200 lv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~--~ 274 (466)
T 3l8k_A 200 IIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPV--I 274 (466)
T ss_dssp EECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEEC--C
T ss_pred EEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcc--c
Confidence 999999999988 9999999988887 99999999999975 555554322 466445999999999996544 4
Q ss_pred HHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 339 MDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 339 ~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
. + ++..++ +.+| |.||+++|| +.|+|||+|||+.
T Consensus 275 ~-l~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~ 311 (466)
T 3l8k_A 275 P-EGAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANG 311 (466)
T ss_dssp C-TTTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTC
T ss_pred c-cchhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCC
Confidence 3 4 566666 5678 999999999 8999999999985
No 30
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=1.1e-34 Score=315.25 Aligned_cols=278 Identities=14% Similarity=0.217 Sum_probs=203.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCCCCc-c-cccccccc---------------------Ccc
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAFTPL-L-PSVTNGTV---------------------EAR 109 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~~p~-~-~~~~~g~~---------------------~~~ 109 (584)
+..++|||||||+||+++|..|++. +.+|+|||++++++|... + ..+..+.. .+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 3457999999999999999998854 899999999988766421 1 11111100 000
Q ss_pred cccHHHHHHHHHcCCcEEEEEE-EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCc-----c
Q 045826 110 SIVEPIRNIVRKKGMDIQFKEA-ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGV-----V 183 (584)
Q Consensus 110 ~i~~~~~~~~~~~g~~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~-----~ 183 (584)
......+.+.+.....++++.+ +|+.||++.++|.+.++. .+.||+||||||++|+.++++|. .
T Consensus 89 ~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~----------~i~yd~lviATGs~p~~~~~~~~~~~~~~ 158 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGS----------QITYEKCLIATGGTPRSLSAIDRAGAEVK 158 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSC----------EEEEEEEEECCCEEECCCHHHHTSCHHHH
T ss_pred HhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCCccccccccc
Confidence 0000001111101124777775 899999999999886543 79999999999999987766552 2
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEE
Q 045826 184 EHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRIT 263 (584)
Q Consensus 184 ~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~ 263 (584)
++++.+++.+++..++..+ ..+++++|||||++|+|+|..|++.+++ .+++|+
T Consensus 159 ~~v~~~~~~~d~~~l~~~~-----------------~~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V~ 211 (493)
T 1m6i_A 159 SRTTLFRKIGDFRSLEKIS-----------------REVKSITIIGGGFLGSELACALGRKARA----------LGTEVI 211 (493)
T ss_dssp HTEEECCSHHHHHHHHHHH-----------------HHCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEEE
T ss_pred CceEEEcCHHHHHHHHHHh-----------------hcCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEEE
Confidence 3556678888887776543 2456999999999999999999886531 147899
Q ss_pred EecCCccccc-cccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHH
Q 045826 264 LLEAGDHILN-MFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMD 340 (584)
Q Consensus 264 lv~~~~~il~-~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~ 340 (584)
++++.+.+++ .+++.+.+.+.+.+++.||+++++++|++++. +.+.+.. .+|++ +++|.||||+|++++. .
T Consensus 212 ~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l-~dG~~--i~aD~Vv~a~G~~pn~---~ 285 (493)
T 1m6i_A 212 QLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKL-KDGRK--VETDHIVAAVGLEPNV---E 285 (493)
T ss_dssp EECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECCCEEECC---T
T ss_pred EEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEE-CCCCE--EECCEEEECCCCCccH---H
Confidence 9999887665 46788999999999999999999999999963 3444433 45765 9999999999965554 3
Q ss_pred HHHHhCC--cC-CCceeeCCCCccCCCCCEEEeCcccccc
Q 045826 341 FMKQIGQ--AN-RRVLATDEWLRVEGCESVYALGDCATIN 377 (584)
Q Consensus 341 l~~~~~l--~~-~g~i~Vd~~l~~~~~~~VfaiGD~a~~~ 377 (584)
+++.+++ +. +|+|.||++||+ .|+|||+|||+..+
T Consensus 286 l~~~~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~ 323 (493)
T 1m6i_A 286 LAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFY 323 (493)
T ss_dssp THHHHTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEE
T ss_pred HHHHcCCccccCCCcEEECCCccc--CCCeeEeeeeEecc
Confidence 5566676 33 588999999998 59999999999753
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.1e-34 Score=315.29 Aligned_cols=267 Identities=19% Similarity=0.292 Sum_probs=198.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc------------------------cccccC---
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV------------------------TNGTVE--- 107 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~------------------------~~g~~~--- 107 (584)
+.++||||||||++|+++|.+|++.|++|+|||+++.+++......+ ......
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 34679999999999999999999999999999999865543211100 000000
Q ss_pred -cccccHHH----H---HHH-----HHcCCcEEEE-EEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCC
Q 045826 108 -ARSIVEPI----R---NIV-----RKKGMDIQFK-EAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQ 173 (584)
Q Consensus 108 -~~~i~~~~----~---~~~-----~~~g~~v~~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~ 173 (584)
.+++...+ . .++ .+.++ +++ ++++..++. +.|.+. + ..+.||+||+|||+.
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~--~~v~~~-g----------~~~~~d~lViATGs~ 185 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNL--EYILNCPAKVIDN--HTVEAA-G----------KVFKAKNLILAVGAG 185 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCC--CEEESSCCEEEET--TEEEET-T----------EEEEBSCEEECCCEE
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCc--EEEEeeEEEEeeC--CEEEEC-C----------EEEEeCEEEECCCCC
Confidence 12222222 2 445 56664 455 788888886 466663 2 279999999999999
Q ss_pred CCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhC
Q 045826 174 ANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLY 253 (584)
Q Consensus 174 ~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~ 253 (584)
|..|++||..... +.+..++. + + +.. ..+++++|||+|++|+|+|..+.+++
T Consensus 186 p~~p~i~G~~~~~--v~~~~~~~---~------~---l~~------~~g~~vvViGgG~~g~E~A~~l~~~G-------- 237 (523)
T 1mo9_A 186 PGTLDVPGVNAKG--VFDHATLV---E------E---LDY------EPGSTVVVVGGSKTAVEYGCFFNATG-------- 237 (523)
T ss_dssp CCCCCSTTTTSBT--EEEHHHHH---H------H---CCS------CCCSEEEEECCSHHHHHHHHHHHHTT--------
T ss_pred CCCCCCCCcccCc--EeeHHHHH---H------H---HHh------cCCCeEEEECCCHHHHHHHHHHHHcC--------
Confidence 9999999975421 12333221 0 0 111 12269999999999999999998865
Q ss_pred cCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce----EEEEeCCCCeEEEEecceEE
Q 045826 254 PSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KE----ISTKDRATGQISSIPYGMVV 327 (584)
Q Consensus 254 ~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~----v~~~~~~~G~~~~i~~D~vI 327 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+.. .+|+ .++++|.||
T Consensus 238 ------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~-~~G~-~~i~aD~Vv 309 (523)
T 1mo9_A 238 ------RRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMT-PNGE-MRIETDFVF 309 (523)
T ss_dssp ------CEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEE-TTEE-EEEECSCEE
T ss_pred ------CeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEE-CCCc-EEEEcCEEE
Confidence 7999999999999999999999999999999999999999999964 44 44443 3465 249999999
Q ss_pred EccCCCCCchHHHHHHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 328 WSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 328 ~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+|+|.+++... +++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 310 ~A~G~~p~~~~--~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 356 (523)
T 1mo9_A 310 LGLGEQPRSAE--LAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIG 356 (523)
T ss_dssp ECCCCEECCHH--HHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGC
T ss_pred ECcCCccCCcc--CHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCC
Confidence 99996555421 5667776 56899999999998 8999999999985
No 32
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.5e-35 Score=315.05 Aligned_cols=268 Identities=19% Similarity=0.306 Sum_probs=192.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc--------------------cc-ccc-----cCccc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS--------------------VT-NGT-----VEARS 110 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~--------------------~~-~g~-----~~~~~ 110 (584)
.+||+|||||+||+++|..|++.|++|+|||++ .+++...... .. .+. .+...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 469999999999999999999999999999998 3332211100 00 000 01111
Q ss_pred -----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCC
Q 045826 111 -----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT 179 (584)
Q Consensus 111 -----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~i 179 (584)
+...+.+.+++.+ ++++.+++..++. +.+.+....+ +...+.||+||+|||+.|..|++
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~g--v~~~~g~~~~id~--~~v~V~~~~G------~~~~~~~d~lViAtG~~~~~~~~ 151 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNK--ITEIHGYGTFADA--NTLLVDLNDG------GTESVTFDNAIIATGSSTRLVPG 151 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEECEEEEESSS--SEEEEEETTS------CCEEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CeEEEEeCCC------ceEEEEcCEEEECCCCCCCCCCC
Confidence 1112345566666 4556666655543 4555543221 01379999999999999998888
Q ss_pred CCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCC
Q 045826 180 PGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEF 259 (584)
Q Consensus 180 pG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~ 259 (584)
+|.+.. +.+..++..+ . ...++++|||||++|+|+|..+.+++
T Consensus 152 ~g~~~~---~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~g-------------- 194 (464)
T 2a8x_A 152 TSLSAN---VVTYEEQILS-------------R-------ELPKSIIIAGAGAIGMEFGYVLKNYG-------------- 194 (464)
T ss_dssp CCCBTT---EECHHHHHTC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCCCce---EEecHHHhhc-------------c-------ccCCeEEEECCcHHHHHHHHHHHHcC--------------
Confidence 887543 3344332211 1 13469999999999999999998865
Q ss_pred cEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCCCCch
Q 045826 260 TRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIGTRPV 337 (584)
Q Consensus 260 ~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~ 337 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ .+.+....+|+..++++|.||||+|.+++
T Consensus 195 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~-- 272 (464)
T 2a8x_A 195 VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN-- 272 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC--
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc--
Confidence 79999999999999999999999999999999999999999999643 35444212364335999999999996544
Q ss_pred HHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 338 IMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 338 ~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+..+ ++++++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 273 ~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 312 (464)
T 2a8x_A 273 VEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNG 312 (464)
T ss_dssp CSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGC
T ss_pred CCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCC
Confidence 3222 566666 56789999999998 8999999999985
No 33
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.3e-35 Score=314.36 Aligned_cols=267 Identities=20% Similarity=0.350 Sum_probs=192.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc-------------------c-ccc------cCccc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV-------------------T-NGT------VEARS 110 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~-------------------~-~g~------~~~~~ 110 (584)
++||||||||+||+++|..|++.|++|+|||++ .+++......+ . .+. .+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 479999999999999999999999999999998 44432111000 0 000 01111
Q ss_pred -----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCC
Q 045826 111 -----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT 179 (584)
Q Consensus 111 -----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~i 179 (584)
+...+...+++.+ ++++.+++..++.+ .+.+....+ ..++.||+||+|||+.|..|++
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~id~~--~v~V~~~~G-------~~~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNK--VEIVKGEAYFVDAN--TVRVVNGDS-------AQTYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT--CEEEESEEEEEETT--EEEEEETTE-------EEEEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEccCC--eEEEEeCCC-------cEEEEeCEEEEecCCCCCCCCC
Confidence 1112345566666 55677777777754 444433211 1379999999999999998888
Q ss_pred CCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCC
Q 045826 180 PGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEF 259 (584)
Q Consensus 180 pG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~ 259 (584)
+|.++. +.+..++.. +. ...++++|||||++|+|+|..+.+++
T Consensus 151 ~g~~~~---v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~g-------------- 193 (455)
T 1ebd_A 151 FKFSNR---ILDSTGALN-------------LG-------EVPKSLVVIGGGYIGIELGTAYANFG-------------- 193 (455)
T ss_dssp BCCCSS---EECHHHHHT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCccce---EecHHHHhc-------------cc-------cCCCeEEEECCCHHHHHHHHHHHHcC--------------
Confidence 887543 334433221 11 13469999999999999999998865
Q ss_pred cEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCch
Q 045826 260 TRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPV 337 (584)
Q Consensus 260 ~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~ 337 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +++.+....+|+..++++|.||+|+|.+++
T Consensus 194 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~-- 271 (455)
T 1ebd_A 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN-- 271 (455)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES--
T ss_pred CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc--
Confidence 7999999999999999999999999999999999999999999964 335443211233335999999999996544
Q ss_pred HHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 338 IMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 338 ~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 272 ~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 311 (455)
T 1ebd_A 272 TDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVP 311 (455)
T ss_dssp CSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSS
T ss_pred cCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCC
Confidence 3222 455565 56789999999998 8999999999985
No 34
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-34 Score=314.43 Aligned_cols=273 Identities=22% Similarity=0.312 Sum_probs=195.1
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc---------------------ccc------c
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT---------------------NGT------V 106 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~---------------------~g~------~ 106 (584)
.+.++||+|||||+||+++|..|++.|++|+|||+++.+++......+. .+. .
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKL 101 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEE
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCcc
Confidence 3456899999999999999999999999999999988776642211100 000 0
Q ss_pred Cccc-----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCC
Q 045826 107 EARS-----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQAN 175 (584)
Q Consensus 107 ~~~~-----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~ 175 (584)
+... +...+...++..+ ++++.+++..+++. .+.+.... .+...+.||+||||||+.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~~~~~--~~~v~~~~------g~~~~~~~d~lViATGs~p- 170 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNK--IDGFQGTGKVLGQG--KVSVTNEK------GEEQVLEAKNVVIATGSDV- 170 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEECSSS--EEEEECTT------SCEEEEECSEEEECCCEEC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEecCC--EEEEEeCC------CceEEEEeCEEEEccCCCC-
Confidence 0000 1112334455666 66888888887765 44444322 1124899999999999986
Q ss_pred CCCCCCccc--ccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhC
Q 045826 176 TFNTPGVVE--HAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLY 253 (584)
Q Consensus 176 ~~~ipG~~~--~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~ 253 (584)
+.+||+.+ ....+.+..+.. .+. ..+++++|||||++|+|+|..+.+++
T Consensus 171 -~~ipg~~~~~~~~~~~~~~~~~-------------~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g-------- 221 (491)
T 3urh_A 171 -AGIPGVEVAFDEKTIVSSTGAL-------------ALE-------KVPASMIVVGGGVIGLELGSVWARLG-------- 221 (491)
T ss_dssp -CCBTTBCCCCCSSSEECHHHHT-------------SCS-------SCCSEEEEECCSHHHHHHHHHHHHHT--------
T ss_pred -CCCCCcccccCCeeEEehhHhh-------------hhh-------hcCCeEEEECCCHHHHHHHHHHHHcC--------
Confidence 46777652 111222322211 111 23469999999999999999999875
Q ss_pred cCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce--EEEEeCCCCeEEEEecceEEEc
Q 045826 254 PSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KE--ISTKDRATGQISSIPYGMVVWS 329 (584)
Q Consensus 254 ~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vI~a 329 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +. +.+.+..+|+..++++|.||+|
T Consensus 222 ------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a 295 (491)
T 3urh_A 222 ------AKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIA 295 (491)
T ss_dssp ------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEEC
T ss_pred ------CEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEe
Confidence 7999999999999999999999999999999999999999999964 33 4444433353335999999999
Q ss_pred cCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 330 TGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 330 ~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+|.+ |+...+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 296 ~G~~--p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 341 (491)
T 3urh_A 296 TGRK--PSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVR 341 (491)
T ss_dssp CCCE--ECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSS
T ss_pred eCCc--cCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC
Confidence 9954 444333 556666 66899999999998 8999999999984
No 35
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.5e-35 Score=315.09 Aligned_cols=271 Identities=19% Similarity=0.294 Sum_probs=196.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccc---------------------cc------cCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTN---------------------GT------VEA 108 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~---------------------g~------~~~ 108 (584)
.++||+|||||+||+++|..|++.|++|+|||+++.+++......+.+ +. .+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 468999999999999999999999999999999987766532111000 00 011
Q ss_pred cc-----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 109 RS-----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 109 ~~-----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
.. +...+...+++.+ ++++.+++..++.+ .+.+.... + +...+.||+||+|||+.|..|
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~~--~~~v~~~~-----G-~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNK--VTYVKGYGKFVSPS--EISVDTIE-----G-ENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEEEETT--EEEECCSS-----S-CCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCC--EEEEEeCC-----C-ceEEEEcCEEEECCCCCCCCC
Confidence 11 1111344556666 55667777667654 45443221 1 013799999999999999988
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCC
Q 045826 178 NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLK 257 (584)
Q Consensus 178 ~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~ 257 (584)
+++|.+.. .+.+..++.. +. ...++++|||||++|+|+|..+.+++
T Consensus 155 ~~~g~~~~--~v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~g------------ 200 (470)
T 1dxl_A 155 PGVTIDEK--KIVSSTGALA-------------LS-------EIPKKLVVIGAGYIGLEMGSVWGRIG------------ 200 (470)
T ss_dssp TTBCCCSS--SEECHHHHTT-------------CS-------SCCSEEEESCCSHHHHHHHHHHHHHT------------
T ss_pred CCCCCCcc--cEEeHHHhhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHcC------------
Confidence 88887541 1223332211 11 13469999999999999999998875
Q ss_pred CCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCCe--EEE--EeCCCCeEEEEecceEEEccCCC
Q 045826 258 EFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKE--IST--KDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 258 ~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~--v~~--~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.++ +.+ .+..+|+..++++|.||||+|.+
T Consensus 201 --~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 201 --SEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred --CcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 799999999999999999999999999999999999999999997543 433 32113532359999999999965
Q ss_pred CCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 334 TRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 334 ~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
++ ...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 279 p~--~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 320 (470)
T 1dxl_A 279 PF--TSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIP 320 (470)
T ss_dssp EC--CTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSS
T ss_pred cC--CCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCC
Confidence 44 3222 455666 55789999999998 8999999999985
No 36
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2e-34 Score=313.37 Aligned_cols=272 Identities=22% Similarity=0.300 Sum_probs=196.1
Q ss_pred CCeEEEECCcHHHHHHHHhccc-CCCeEEEEc--------CCCCCCCCCccccccc--------------------c---
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS-NSFEVQVVS--------PRNYFAFTPLLPSVTN--------------------G--- 104 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid--------~~~~~~~~p~~~~~~~--------------------g--- 104 (584)
.+||||||||+||+++|..|++ .|++|+||| +++.++++.....+.+ +
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999999 999999999 2444444322111000 0
Q ss_pred -----ccCccccc-----------HHHHHHHHHc-CCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEE
Q 045826 105 -----TVEARSIV-----------EPIRNIVRKK-GMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILV 167 (584)
Q Consensus 105 -----~~~~~~i~-----------~~~~~~~~~~-g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LV 167 (584)
..+...+. ..+...+++. + ++++.+++..++. ++|.+....+. .......+.||+||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~g--v~~~~g~~~~i~~--~~v~v~~~~~~--~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEG--LDFFLGWGSLESK--NVVVVRETADP--KSAVKERLQADHIL 160 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTT--EEEEESEEEEEET--TEEEEESSSST--TSCEEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEeEEEEeeC--CEEEEeecCCc--cCCCCeEEEcCEEE
Confidence 11111111 1223344555 6 7788999988875 57777521100 00001379999999
Q ss_pred EccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHH
Q 045826 168 IAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVID 247 (584)
Q Consensus 168 lAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~ 247 (584)
||||++|..|++||. ++++ +..++. .+. ...++++|||+|++|+|+|..++++.
T Consensus 161 iATGs~p~~p~i~G~-~~~~---~~~~~~-------------~~~-------~~~~~vvViGgG~ig~E~A~~l~~~~-- 214 (495)
T 2wpf_A 161 LATGSWPQMPAIPGI-EHCI---SSNEAF-------------YLP-------EPPRRVLTVGGGFISVEFAGIFNAYK-- 214 (495)
T ss_dssp ECCCEEECCCCCTTG-GGCE---EHHHHT-------------TCS-------SCCSEEEEECSSHHHHHHHHHHHHHC--
T ss_pred EeCCCCcCCCCCCCc-cccc---cHHHHH-------------hhh-------hcCCeEEEECCCHHHHHHHHHHHhhC--
Confidence 999999999999997 3322 222211 111 13459999999999999999998861
Q ss_pred hHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--e-EEEEeCCCCeEEEEecc
Q 045826 248 DLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--E-ISTKDRATGQISSIPYG 324 (584)
Q Consensus 248 ~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D 324 (584)
| ++.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|++ +++|
T Consensus 215 ------~---~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~--i~~D 282 (495)
T 2wpf_A 215 ------P---PGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTF-ESGKT--LDVD 282 (495)
T ss_dssp ------C---TTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEE-TTSCE--EEES
T ss_pred ------C---CCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEE-CCCcE--EEcC
Confidence 0 1379999999999999999999999999999999999999999999643 2 44443 34764 9999
Q ss_pred eEEEccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 325 MVVWSTGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 325 ~vI~a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
.||+|+|. .|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 283 ~vv~a~G~--~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 333 (495)
T 2wpf_A 283 VVMMAIGR--IPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITD 333 (495)
T ss_dssp EEEECSCE--EECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEEECCCC--cccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 99999995 4555434 566676 55789999999998 8999999999984
No 37
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=5.5e-34 Score=309.55 Aligned_cols=272 Identities=19% Similarity=0.296 Sum_probs=196.6
Q ss_pred CCeEEEECCcHHHHHHHHhccc-CCCeEEEEc--------CCCCCCCCCccccccc--------------------c---
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS-NSFEVQVVS--------PRNYFAFTPLLPSVTN--------------------G--- 104 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid--------~~~~~~~~p~~~~~~~--------------------g--- 104 (584)
++||||||||+||+++|.+|++ .|++|+||| +++.++++.....+.+ +
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 999999999 2445555322111000 0
Q ss_pred -----ccCccccc-----------HHHHHHHHHc-CCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEE
Q 045826 105 -----TVEARSIV-----------EPIRNIVRKK-GMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILV 167 (584)
Q Consensus 105 -----~~~~~~i~-----------~~~~~~~~~~-g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LV 167 (584)
..+...+. ..+...+++. + ++++.+++..++. +++.+..... .++.....+.||+||
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~g--v~~~~g~~~~i~~--~~v~v~~~~~--~~g~~~~~~~~d~lv 156 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEG--LTFHQGFGALQDN--HTVLVRESAD--PNSAVLETLDTEYIL 156 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTT--EEEEESEEEEEET--TEEEEESSSS--TTSCEEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeEEEEeeC--CEEEEEeecc--CCCCceEEEEcCEEE
Confidence 11111111 1233444555 6 7788999999886 4677652100 001001389999999
Q ss_pred EccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHH
Q 045826 168 IAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVID 247 (584)
Q Consensus 168 lAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~ 247 (584)
||||+.|..|++||. ++++ +..++.. +. ...++++|||||++|+|+|..+.++.
T Consensus 157 iAtGs~p~~p~i~g~-~~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~~-- 210 (490)
T 1fec_A 157 LATGSWPQHLGIEGD-DLCI---TSNEAFY-------------LD-------EAPKRALCVGGGYISIEFAGIFNAYK-- 210 (490)
T ss_dssp ECCCEEECCCCSBTG-GGCB---CHHHHTT-------------CS-------SCCSEEEEECSSHHHHHHHHHHHHHS--
T ss_pred EeCCCCCCCCCCCCc-ccee---cHHHHhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHhhc--
Confidence 999999999999987 3322 3322211 11 13459999999999999999998861
Q ss_pred hHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--e-EEEEeCCCCeEEEEecc
Q 045826 248 DLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--E-ISTKDRATGQISSIPYG 324 (584)
Q Consensus 248 ~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D 324 (584)
.++.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|++ +++|
T Consensus 211 ---------~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~--i~~D 278 (490)
T 1fec_A 211 ---------ARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVF-ESGAE--ADYD 278 (490)
T ss_dssp ---------CTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEE-TTSCE--EEES
T ss_pred ---------cCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEE-CCCcE--EEcC
Confidence 01379999999999999999999999999999999999999999999643 2 44443 34764 9999
Q ss_pred eEEEccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 325 MVVWSTGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 325 ~vI~a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
.||+|+|.+ |+...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 279 ~vv~a~G~~--p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~ 329 (490)
T 1fec_A 279 VVMLAIGRV--PRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTD 329 (490)
T ss_dssp EEEECSCEE--ESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEEEccCCC--cCccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 999999954 444334 566676 56889999999998 8999999999984
No 38
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=7e-34 Score=292.23 Aligned_cols=263 Identities=15% Similarity=0.184 Sum_probs=187.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccc----cccc--cccCcccccHHHHHHHHHcCCcEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLP----SVTN--GTVEARSIVEPIRNIVRKKGMDIQFK 129 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~----~~~~--g~~~~~~i~~~~~~~~~~~g~~v~~~ 129 (584)
.++||+|||||+||+++|..|++.|++|+|||++ ..++..... ..+. ......++...+.+.+.+.+++ ++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~--~~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAK--VE 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCE--EE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCE--EE
Confidence 3579999999999999999999999999999998 333322111 1110 0122335566677778888854 55
Q ss_pred EEEEEEEecC--CC---EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHH
Q 045826 130 EAECYKIDAE--KK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVI 203 (584)
Q Consensus 130 ~~~v~~id~~--~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~ 203 (584)
.++|..++.+ ++ .|.+.++. .+.||+||+|+|+.|..+++||..++. ..+..... .
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~-------~- 145 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNG----------EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCAT-------C- 145 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH-------H-
T ss_pred eeeEEEEEeccCCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhccCceEEEecc-------C-
Confidence 6899999876 43 55554432 799999999999999989999875421 01111100 0
Q ss_pred HHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHH
Q 045826 204 DCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASA 283 (584)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~ 283 (584)
+ .....+++++|||+|++|+|+|..|.+.+ .+|+++++.+.+.. ++.+
T Consensus 146 ---~---------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~--~~~~---- 193 (325)
T 2q7v_A 146 ---D---------GFFYKGKKVVVIGGGDAAVEEGMFLTKFA--------------DEVTVIHRRDTLRA--NKVA---- 193 (325)
T ss_dssp ---H---------GGGGTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCCS--CHHH----
T ss_pred ---C---------HHHcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeCCCcCCc--chHH----
Confidence 0 00124569999999999999999987653 79999999987643 3332
Q ss_pred HHHHH-hCCcEEEeCCceeEEcCC----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHh-CCcCCCceeeCC
Q 045826 284 EEKFK-RDGIDLKTGSMVVKLSDK----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI-GQANRRVLATDE 357 (584)
Q Consensus 284 ~~~L~-~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~l~~~g~i~Vd~ 357 (584)
.+.+. +.||+++++++|++++.+ ++.+.+..+|+..++++|.||||+|++++. .+++.. .++.+|+|.||+
T Consensus 194 ~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~~~~~~~g~i~vd~ 270 (325)
T 2q7v_A 194 QARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNT---AFVKDTVSLRDDGYVDVRD 270 (325)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESC---GGGTTTSCBCTTSCBCCBT
T ss_pred HHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCCh---HHHhhhcccCCCccEecCC
Confidence 33444 469999999999999755 466664345765569999999999976553 333333 336688999999
Q ss_pred CCccCCCCCEEEeCcccc
Q 045826 358 WLRVEGCESVYALGDCAT 375 (584)
Q Consensus 358 ~l~~~~~~~VfaiGD~a~ 375 (584)
++++ +.|+|||+|||+.
T Consensus 271 ~~~t-~~~~vya~GD~~~ 287 (325)
T 2q7v_A 271 EIYT-NIPMLFAAGDVSD 287 (325)
T ss_dssp TTBC-SSTTEEECSTTTC
T ss_pred CCcc-CCCCEEEeecccC
Confidence 9998 8999999999985
No 39
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=7.4e-34 Score=307.01 Aligned_cols=265 Identities=17% Similarity=0.244 Sum_probs=192.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc----------------------c---cccc--cccCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL----------------------P---SVTN--GTVEA 108 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~----------------------~---~~~~--g~~~~ 108 (584)
.++||||||||+||+++|.+|++.|++|+|||++ .+++.... + .+.. ...+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 3589999999999999999999999999999998 33332110 0 0100 00111
Q ss_pred ccccH-------H-----HHHHHHHc-CCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCC
Q 045826 109 RSIVE-------P-----IRNIVRKK-GMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQAN 175 (584)
Q Consensus 109 ~~i~~-------~-----~~~~~~~~-g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~ 175 (584)
..+.. . +.+++++. + ++++.+++..++.....|.+.++. ...+.||+||+|||++|.
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~--v~~~~g~~~~~~~~~~~v~~~~g~--------~~~~~~d~lviAtGs~p~ 151 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPA--ITVVHGEARFKDDQSLTVRLNEGG--------ERVVMFDRCLVATGASPA 151 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTT--EEEEEEEEEEEETTEEEEEETTSS--------EEEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCC--eEEEEEEEEEccCCEEEEEeCCCc--------eEEEEeCEEEEeCCCCCC
Confidence 11111 1 22344444 5 778889999998764444432221 137999999999999999
Q ss_pred CCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcC
Q 045826 176 TFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPS 255 (584)
Q Consensus 176 ~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~ 255 (584)
.|++||.++. .+.+..++..+ . ..+++++|||+|++|+|+|..+.+++
T Consensus 152 ~p~i~G~~~~--~~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~g---------- 199 (467)
T 1zk7_A 152 VPPIPGLKES--PYWTSTEALAS-------------D-------TIPERLAVIGSSVVALELAQAFARLG---------- 199 (467)
T ss_dssp CCCCTTTTTS--CCBCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHTT----------
T ss_pred CCCCCCCCcC--ceecHHHHhcc-------------c-------ccCCEEEEECCCHHHHHHHHHHHHcC----------
Confidence 9999998542 12233332211 0 13469999999999999999998865
Q ss_pred CCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 256 LKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 256 ~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+|+++++.+++++ +++.+.+.+.+.+++.||+++++++|++++.+ .+.+.. + +.+ +++|.||+|+|.+
T Consensus 200 ----~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~-~~~--i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 200 ----SKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTT-T-HGE--LRADKLLVATGRT 270 (467)
T ss_dssp ----CEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEE-T-TEE--EEESEEEECSCEE
T ss_pred ----CEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-C-CcE--EEcCEEEECCCCC
Confidence 79999999999999 99999999999999999999999999999642 333333 2 443 9999999999954
Q ss_pred CCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 334 TRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 334 ~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|+...+ ++..++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 271 --p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~ 312 (467)
T 1zk7_A 271 --PNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTD 312 (467)
T ss_dssp --ESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBS
T ss_pred --cCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 444322 455666 55789999999998 8999999999985
No 40
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.8e-34 Score=310.19 Aligned_cols=259 Identities=19% Similarity=0.301 Sum_probs=193.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc--------------------c-cc------ccCcc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV--------------------T-NG------TVEAR 109 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~--------------------~-~g------~~~~~ 109 (584)
++||+|||||+||+++|.+|++.|++|+|||++ .+++......+ . .+ ..+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 579999999999999999999999999999998 34432111000 0 00 01111
Q ss_pred c-----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 110 S-----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 110 ~-----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
. +...+...+.+.+ ++++.+++..++. +.|.+ ++ ..+.||+||+|||+.|..|+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~i~~--~~v~~-~g----------~~~~~d~lviAtGs~p~~p~ 147 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNN--VDVIKGFARFVDA--KTLEV-NG----------ETITADHILIATGGRPSHPD 147 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCCEEEET--TEEEE-TT----------EEEEEEEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CEEEE-CC----------EEEEeCEEEECCCCCCCCCC
Confidence 1 1112334455666 6678888888875 46766 22 27999999999999999999
Q ss_pred CCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCC
Q 045826 179 TPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKE 258 (584)
Q Consensus 179 ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~ 258 (584)
+||. +++ .+..++..+ . ...++++|||||++|+|+|..+++++
T Consensus 148 i~g~-~~~---~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~g------------- 190 (450)
T 1ges_A 148 IPGV-EYG---IDSDGFFAL-------------P-------ALPERVAVVGAGYIGVELGGVINGLG------------- 190 (450)
T ss_dssp STTG-GGS---BCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHTT-------------
T ss_pred CCCc-cce---ecHHHhhhh-------------h-------hcCCeEEEECCCHHHHHHHHHHHhcC-------------
Confidence 9997 332 233332211 1 12459999999999999999998865
Q ss_pred CcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--e-EEEEeCCCCeEEEEecceEEEccCCCCC
Q 045826 259 FTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--E-ISTKDRATGQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 259 ~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 335 (584)
.+|+++++.+++++.+++.+.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|+. +++|.||+|+|. .
T Consensus 191 -~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~--i~~D~vv~a~G~--~ 264 (450)
T 1ges_A 191 -AKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLEL-EDGRS--ETVDCLIWAIGR--E 264 (450)
T ss_dssp -CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEESEEEECSCE--E
T ss_pred -CEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEE-CCCcE--EEcCEEEECCCC--C
Confidence 79999999999999999999999999999999999999999999643 3 44443 34764 999999999995 4
Q ss_pred chHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 336 PVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 336 p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 265 p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~ 306 (450)
T 1ges_A 265 PANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTG 306 (450)
T ss_dssp ESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGT
T ss_pred cCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCC
Confidence 444334 566676 56899999999997 8999999999974
No 41
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.2e-34 Score=312.31 Aligned_cols=271 Identities=19% Similarity=0.315 Sum_probs=185.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc----cc---------------cc-cc-----ccCcc--
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL----PS---------------VT-NG-----TVEAR-- 109 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~----~~---------------~~-~g-----~~~~~-- 109 (584)
++||||||||+||+++|..|++.|++|+|||+++ +++.... +. .. .+ ..+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 4799999999999999999999999999999985 3332111 10 00 00 01111
Q ss_pred ---------cccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCc---cCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 110 ---------SIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTED---RTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 110 ---------~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~---~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
.+...+...+++.+ ++++.+++..++. +.+.+.+... ....+.....+.||+||+|||+.|..|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p 156 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDK--VDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFP 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--CEEEESCCCCC----------------------------CBSSEEECCCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCC
Confidence 11122344556666 5567777766664 4555533000 000000012799999999999999999
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCC
Q 045826 178 NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLK 257 (584)
Q Consensus 178 ~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~ 257 (584)
++||.+ +++ +..++. .+. . .++++|||||++|+|+|..|++++
T Consensus 157 ~i~G~~-~~~---~~~~~~-------------~~~-------~-~~~vvViGgG~ig~E~A~~l~~~g------------ 199 (500)
T 1onf_A 157 PVKGIE-NTI---SSDEFF-------------NIK-------E-SKKIGIVGSGYIAVELINVIKRLG------------ 199 (500)
T ss_dssp SCTTGG-GCE---EHHHHT-------------TCC-------C-CSEEEEECCSHHHHHHHHHHHTTT------------
T ss_pred CCCCCC-ccc---CHHHHh-------------ccC-------C-CCeEEEECChHHHHHHHHHHHHcC------------
Confidence 999973 322 222211 111 1 469999999999999999998764
Q ss_pred CCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--e-EEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 258 EFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--E-ISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 258 ~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|++ ++++|.||||+|.++
T Consensus 200 --~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~-~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 200 --IDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHL-SDGRI-YEHFDHVIYCVGRSP 275 (500)
T ss_dssp --CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEE-TTSCE-EEEESEEEECCCBCC
T ss_pred --CeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEE-CCCcE-EEECCEEEECCCCCc
Confidence 79999999999999999999999999999999999999999999642 3 44443 34653 489999999999654
Q ss_pred CchHHHH-HHHhCC-cCCCceeeCCCCccCCCCCEEEeCccccc
Q 045826 335 RPVIMDF-MKQIGQ-ANRRVLATDEWLRVEGCESVYALGDCATI 376 (584)
Q Consensus 335 ~p~~~~l-~~~~~l-~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 376 (584)
+...+ ++.+++ ..+|+|.||+++|| +.|+|||+|||+..
T Consensus 276 --~~~~l~~~~~g~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~ 316 (500)
T 1onf_A 276 --DTENLKLEKLNVETNNNYIVVDENQRT-SVNNIYAVGDCCMV 316 (500)
T ss_dssp --TTTTSSCTTTTCCBSSSCEEECTTCBC-SSSSEEECSTTEEE
T ss_pred --CCCCCCchhcCccccCCEEEECCCccc-CCCCEEEEeccccc
Confidence 44334 455665 36789999999997 89999999999964
No 42
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=6.6e-34 Score=310.99 Aligned_cols=270 Identities=18% Similarity=0.228 Sum_probs=192.4
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC--------CCCCCCccccccc--------------------c--
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN--------YFAFTPLLPSVTN--------------------G-- 104 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~--------~~~~~p~~~~~~~--------------------g-- 104 (584)
+..+||+|||||+||+++|..|++.|++|+|||+++ .+++......+.+ +
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 345799999999999999999999999999999864 3343221110000 0
Q ss_pred -----ccCcccccH-----------HHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEE
Q 045826 105 -----TVEARSIVE-----------PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVI 168 (584)
Q Consensus 105 -----~~~~~~i~~-----------~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVl 168 (584)
..+...+.. .+...++..+ ++++.+++..+++.. +.+....+ +.+++.||+|||
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~g--V~~i~g~a~~~d~~~--v~v~~~~g------~~~~i~~d~lVi 179 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKK--VVYENAYGQFIGPHR--IKATNNKG------KEKIYSAERFLI 179 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETTE--EEEECTTC------CCCEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeCCE--EEEEcCCC------CEEEEECCEEEE
Confidence 111111111 1223455555 678899999998774 44433211 123799999999
Q ss_pred ccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHh
Q 045826 169 AMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDD 248 (584)
Q Consensus 169 AtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~ 248 (584)
|||++|..|++||..++.+ +..++. .+. ...++++|||+|++|+|+|..+++++
T Consensus 180 ATGs~p~~p~i~G~~~~~~---t~~~~~-------------~l~-------~~~~~vvVIGgG~ig~E~A~~l~~~G--- 233 (519)
T 3qfa_A 180 ATGERPRYLGIPGDKEYCI---SSDDLF-------------SLP-------YCPGKTLVVGASYVALECAGFLAGIG--- 233 (519)
T ss_dssp CCCEEECCCCCTTHHHHCB---CHHHHT-------------TCS-------SCCCSEEEECCSHHHHHHHHHHHHTT---
T ss_pred ECCCCcCCCCCCCccCceE---cHHHHh-------------hhh-------hcCCeEEEECCcHHHHHHHHHHHHcC---
Confidence 9999999999999765432 222211 111 22348999999999999999999875
Q ss_pred HhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC------CeEE--EEeCCCCeEEE
Q 045826 249 LSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD------KEIS--TKDRATGQISS 320 (584)
Q Consensus 249 ~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~------~~v~--~~~~~~G~~~~ 320 (584)
.+|+++++ +.+++.+++++.+.+.+.|++.||++++++.+++++. +.+. +...++++..+
T Consensus 234 -----------~~Vtlv~~-~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~ 301 (519)
T 3qfa_A 234 -----------LDVTVMVR-SILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIE 301 (519)
T ss_dssp -----------CCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEE
T ss_pred -----------CeEEEEec-ccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEE
Confidence 79999998 4789999999999999999999999999988777642 3333 33333334345
Q ss_pred EecceEEEccCCCCCchHHHH-HHHhCC--c-CCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 321 IPYGMVVWSTGIGTRPVIMDF-MKQIGQ--A-NRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 321 i~~D~vI~a~G~~~~p~~~~l-~~~~~l--~-~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+++|.||+|+|.+ |++..+ ++..++ + .+|+|.||+++|| +.|||||+|||+.
T Consensus 302 ~~~D~vi~a~G~~--p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~ 357 (519)
T 3qfa_A 302 GEYNTVMLAIGRD--ACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILE 357 (519)
T ss_dssp EEESEEEECSCEE--ESCSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBS
T ss_pred EECCEEEEecCCc--ccCCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccC
Confidence 8999999999954 444333 455666 4 4789999999998 8999999999984
No 43
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=4.6e-34 Score=291.48 Aligned_cols=262 Identities=16% Similarity=0.165 Sum_probs=188.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEE-EcCCCCCCCCCcc----ccccc--cccCcccccHHHHHHHHHcCCcEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQV-VSPRNYFAFTPLL----PSVTN--GTVEARSIVEPIRNIVRKKGMDIQF 128 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~l-id~~~~~~~~p~~----~~~~~--g~~~~~~i~~~~~~~~~~~g~~v~~ 128 (584)
.++||+|||||+||+++|..|++.|++|+| ||+ +.+++.... +..+. ......++...+...+.+.++ ++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGL--KH 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCC--EE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCc--EE
Confidence 468999999999999999999999999999 999 444432211 11111 112334666777888888874 45
Q ss_pred EEEEEEEEecCC--CEEE--EeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccc-cccCHHHHHHHHHHHH
Q 045826 129 KEAECYKIDAEK--KQIY--CRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAH-FLKEVEHAQRIRRSVI 203 (584)
Q Consensus 129 ~~~~v~~id~~~--~~v~--~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~~~~~l~ 203 (584)
..++|..+ ++. +.+. +... . .+.||+||+|||+.|+.|.+||...+.. .+......
T Consensus 80 ~~~~v~~i-~~~~~~~~~v~~~~~---------~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~-------- 140 (315)
T 3r9u_A 80 EMVGVEQI-LKNSDGSFTIKLEGG---------K-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATC-------- 140 (315)
T ss_dssp ECCCEEEE-EECTTSCEEEEETTS---------C-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH--------
T ss_pred EEEEEEEE-ecCCCCcEEEEEecC---------C-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecc--------
Confidence 66788888 554 4454 3321 1 7899999999999999999999764210 11111100
Q ss_pred HHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHH
Q 045826 204 DCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASA 283 (584)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~ 283 (584)
......+++++|||+|++|+|+|..+.+.+ .+|+++++.+.+.. ++. .+
T Consensus 141 ------------~~~~~~~~~v~viG~g~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~--~~~---~~ 189 (315)
T 3r9u_A 141 ------------DGFFYKNKEVAVLGGGDTALEEALYLANIC--------------SKIYLIHRRDEFRA--APS---TV 189 (315)
T ss_dssp ------------HGGGGTTSEEEEECCBHHHHHHHHHHHTTS--------------SEEEEECSSSSCBS--CHH---HH
T ss_pred ------------cccccCcCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCCCCCC--CHH---HH
Confidence 001134579999999999999999998753 79999999988733 333 33
Q ss_pred HHHHHhCCcEEEeCCceeEEcCCe-----EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHH---hC-C--cCCCc
Q 045826 284 EEKFKRDGIDLKTGSMVVKLSDKE-----ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ---IG-Q--ANRRV 352 (584)
Q Consensus 284 ~~~L~~~GV~v~~~~~V~~v~~~~-----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~---~~-l--~~~g~ 352 (584)
.+.+++.||+++++++|++++.+. +++. ..+|+..++++|.||+|+|..++. .++.. ++ + +.+|+
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~---~~~~~~~~~g~l~~~~~g~ 265 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRN---EILKQDDSKFLCNMEEGGQ 265 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSCEEECC---GGGBCTTSCBSSCBCTTSC
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCc---hhhhcccccceeeecCCCc
Confidence 455578999999999999996543 6665 345765569999999999976554 33333 33 4 66799
Q ss_pred eeeCCCCccCCCCCEEEeCcccc
Q 045826 353 LATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 353 i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|.||+++|| +.|+|||+|||+.
T Consensus 266 i~vd~~~~t-~~~~v~a~GD~~~ 287 (315)
T 3r9u_A 266 VSVDLKMQT-SVAGLFAAGDLRK 287 (315)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBT
T ss_pred EEeCCCccc-CCCCEEEeecccC
Confidence 999999999 8999999999985
No 44
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=5e-34 Score=309.32 Aligned_cols=270 Identities=19% Similarity=0.280 Sum_probs=189.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc--------------------cc-ccc-------cCc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS--------------------VT-NGT-------VEA 108 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~--------------------~~-~g~-------~~~ 108 (584)
.+||||||||+||+++|..|++.|++|+|||+++.+++...... .. .+. .+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999776654321110 00 010 011
Q ss_pred ccc-----------cHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEE------EeCCEEEEccC
Q 045826 109 RSI-----------VEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFA------LDYDILVIAMG 171 (584)
Q Consensus 109 ~~i-----------~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~------i~yD~LVlAtG 171 (584)
..+ ...+...+++.+ ++++.++...++ .+.+.+....+. ... +.||+||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~--~~~v~V~~~~G~------~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNK--VTYYKGNGSFED--ETKIRVTPVDGL------EGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEESS--SSEEEEECCTTC------TTCCSSCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEcc--CCeEEEEecCCC------cccccccceEEeCEEEECcC
Confidence 111 111334566666 556666655543 345555432210 014 99999999999
Q ss_pred CCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhh
Q 045826 172 AQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSK 251 (584)
Q Consensus 172 s~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~ 251 (584)
+.|. .+||.......+.+..++..+ . ..+++++|||||++|+|+|..+++++
T Consensus 155 s~p~--~~~g~~~~~~~v~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~g------ 206 (478)
T 1v59_A 155 SEVT--PFPGIEIDEEKIVSSTGALSL-------------K-------EIPKRLTIIGGGIIGLEMGSVYSRLG------ 206 (478)
T ss_dssp EEEC--CCTTCCCCSSSEECHHHHTTC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHTT------
T ss_pred CCCC--CCCCCCCCCceEEcHHHHHhh-------------h-------ccCceEEEECCCHHHHHHHHHHHHcC------
Confidence 9873 456653221234444433221 1 12469999999999999999998865
Q ss_pred hCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC---C-e--EEEEeCCCCeEEEEecce
Q 045826 252 LYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD---K-E--ISTKDRATGQISSIPYGM 325 (584)
Q Consensus 252 ~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~-~--v~~~~~~~G~~~~i~~D~ 325 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. + . +.+.+..+|+..++++|.
T Consensus 207 --------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (478)
T 1v59_A 207 --------SKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV 278 (478)
T ss_dssp --------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESE
T ss_pred --------CEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCE
Confidence 7999999999999999999999999999999999999999999964 2 2 333321234333599999
Q ss_pred EEEccCCCCCchHHH-HHHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 326 VVWSTGIGTRPVIMD-FMKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 326 vI~a~G~~~~p~~~~-l~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
||+|+|.+++ ... +++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 279 vv~a~G~~p~--~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 328 (478)
T 1v59_A 279 LLVAVGRRPY--IAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTF 328 (478)
T ss_dssp EEECSCEEEC--CTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS
T ss_pred EEECCCCCcC--CCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeeccCC
Confidence 9999995444 432 3556666 55789999999998 8999999999985
No 45
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=7.3e-34 Score=308.18 Aligned_cols=272 Identities=16% Similarity=0.244 Sum_probs=191.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc--------------------ccc------ccCccc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV--------------------TNG------TVEARS 110 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~--------------------~~g------~~~~~~ 110 (584)
.+||||||||+||+++|..|++.|++|+|||+++.+++......+ ..+ ..+...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 479999999999999999999999999999998766543211100 001 011111
Q ss_pred ccH-----------HHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEe--ecCc--cCCCCCceEEEeCCEEEEccCCCCC
Q 045826 111 IVE-----------PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCR--TTED--RTCGGKEEFALDYDILVIAMGAQAN 175 (584)
Q Consensus 111 i~~-----------~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~--~~~~--~~~~~~~~~~i~yD~LVlAtGs~~~ 175 (584)
+.. .+...+++.+ ++++.+++..++. +.+.+. ++.. ....+.+...+.||+||+|||+.|.
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRK--VDVIQGDGQFLDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEEEEEEEEEET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--cEEEeeEEEEccC--CEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 111 1334556666 5566777666664 455543 2200 0000001137999999999999988
Q ss_pred CCC-CCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCc
Q 045826 176 TFN-TPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYP 254 (584)
Q Consensus 176 ~~~-ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~ 254 (584)
.|+ +| .+.. +.+..++.. +. ..+++++|||||++|+|+|..+++++
T Consensus 162 ~~~~i~-~~~~---v~~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~G--------- 208 (482)
T 1ojt_A 162 KLPFIP-EDPR---IIDSSGALA-------------LK-------EVPGKLLIIGGGIIGLEMGTVYSTLG--------- 208 (482)
T ss_dssp CCSSCC-CCTT---EECHHHHTT-------------CC-------CCCSEEEEESCSHHHHHHHHHHHHHT---------
T ss_pred CCCCCC-ccCc---EEcHHHHhc-------------cc-------ccCCeEEEECCCHHHHHHHHHHHHcC---------
Confidence 776 66 3222 334433221 11 13469999999999999999999875
Q ss_pred CCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--eEEEEeCC--C-CeEEEEecceEEEc
Q 045826 255 SLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--EISTKDRA--T-GQISSIPYGMVVWS 329 (584)
Q Consensus 255 ~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~--~-G~~~~i~~D~vI~a 329 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ .+.+...+ + |++ +++|.||||
T Consensus 209 -----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~--~~~D~vv~a 281 (482)
T 1ojt_A 209 -----SRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEP--QRYDAVLVA 281 (482)
T ss_dssp -----CEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSC--EEESCEEEC
T ss_pred -----CeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceE--EEcCEEEEC
Confidence 79999999999999999999999999999999999999999999643 33333211 1 444 889999999
Q ss_pred cCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 330 TGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 330 ~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+|. .|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 282 ~G~--~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 327 (482)
T 1ojt_A 282 AGR--APNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVG 327 (482)
T ss_dssp CCE--EECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTC
T ss_pred cCC--CcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccC
Confidence 995 4555433 566776 45689999999998 8999999999985
No 46
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.1e-33 Score=290.73 Aligned_cols=262 Identities=12% Similarity=0.185 Sum_probs=194.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc-------ccccc-cccCcccccHHHHHHHHHcCCcEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL-------PSVTN-GTVEARSIVEPIRNIVRKKGMDIQF 128 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~-------~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~ 128 (584)
++||||||||+||+++|..|++.|++|+|||+++.+++.... ...+. ......++...+.+.+.+.++++ +
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 85 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI-C 85 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE-E
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE-E
Confidence 579999999999999999999999999999999876643210 00110 01123456666777787777544 2
Q ss_pred EEEEEEEEecCCC---EEEEeecCccCCCCCceEEEeCCEEEEccCC---CCCCCCCCCccccc-cccc-CHHHHHHHHH
Q 045826 129 KEAECYKIDAEKK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGA---QANTFNTPGVVEHA-HFLK-EVEHAQRIRR 200 (584)
Q Consensus 129 ~~~~v~~id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs---~~~~~~ipG~~~~~-~~~~-~~~~a~~~~~ 200 (584)
.+.+|+.++...+ .|.+.++ ++.||+||+|||+ .|..+++||...+. ..+. ..
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g-----------~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~-------- 146 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEE-----------THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFV-------- 146 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSE-----------EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSC--------
T ss_pred ccCEEEEEEECCCCcEEEEECCC-----------EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEec--------
Confidence 3689999998876 4444321 5999999999999 88888999976411 0000 11
Q ss_pred HHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHH
Q 045826 201 SVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRIT 280 (584)
Q Consensus 201 ~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~ 280 (584)
......++++++|||+|++|+|+|..|.+.+ .+|+++++.+++++. +..
T Consensus 147 --------------~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~--------------~~v~~~~~~~~~~~~-~~~-- 195 (332)
T 3lzw_A 147 --------------DDLQKFAGRRVAILGGGDSAVDWALMLEPIA--------------KEVSIIHRRDKFRAH-EHS-- 195 (332)
T ss_dssp --------------SCGGGGBTCEEEEECSSHHHHHHHHHHTTTB--------------SEEEEECSSSSCSSC-HHH--
T ss_pred --------------CCHHHcCCCEEEEECCCHhHHHHHHHHHhhC--------------CeEEEEEecCcCCcc-HHH--
Confidence 0111234679999999999999999987653 799999999987543 222
Q ss_pred HHHHHHHHhCCcEEEeCCceeEEcCCe----EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC-cCCCceee
Q 045826 281 ASAEEKFKRDGIDLKTGSMVVKLSDKE----ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLAT 355 (584)
Q Consensus 281 ~~~~~~L~~~GV~v~~~~~V~~v~~~~----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~V 355 (584)
.+.|++.||+++++++|++++.+. +++.+..+|+..++++|.||||+|+.++. .+++.+++ .++|+|.|
T Consensus 196 ---~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~---~~~~~~~~~~~~g~i~v 269 (332)
T 3lzw_A 196 ---VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSL---GPIKNWGLDIEKNSIVV 269 (332)
T ss_dssp ---HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCC---GGGGGSSCCEETTEEEC
T ss_pred ---HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCc---hHHhhcCccccCCeEEe
Confidence 355889999999999999997654 77777555555579999999999976654 45666676 46789999
Q ss_pred CCCCccCCCCCEEEeCccccc
Q 045826 356 DEWLRVEGCESVYALGDCATI 376 (584)
Q Consensus 356 d~~l~~~~~~~VfaiGD~a~~ 376 (584)
|+++|+ +.|+|||+|||+..
T Consensus 270 d~~~~t-~~~~vya~GD~~~~ 289 (332)
T 3lzw_A 270 KSTMET-NIEGFFAAGDICTY 289 (332)
T ss_dssp CTTSBC-SSTTEEECGGGEEC
T ss_pred CCCCce-ecCCEEEccceecC
Confidence 999998 89999999999864
No 47
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-34 Score=311.30 Aligned_cols=264 Identities=18% Similarity=0.276 Sum_probs=194.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc------------------------cc--------c
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS------------------------VT--------N 103 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~------------------------~~--------~ 103 (584)
..+||||||||+||+++|..|++.|++|+|||+++ +++...... +. .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 35799999999999999999999999999999974 333211000 00 0
Q ss_pred cccCccccc-----------HHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCC
Q 045826 104 GTVEARSIV-----------EPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172 (584)
Q Consensus 104 g~~~~~~i~-----------~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs 172 (584)
...+...+. ..+...+++.+ ++++.+++..+++....+...++. ...+.||+||+|||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~~~~~v~~~~g~--------~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEK--VDVVFGWARFNKDGNVEVQKRDNT--------TEVYSANHILVATGG 158 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEEEEEEEECTTSCEEEEESSSC--------CEEEEEEEEEECCCE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeCCEEEEEeCCCc--------EEEEEeCEEEEcCCC
Confidence 011111111 12334455666 778888888887654344332221 237999999999999
Q ss_pred CCCCC-CCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhh
Q 045826 173 QANTF-NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSK 251 (584)
Q Consensus 173 ~~~~~-~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~ 251 (584)
.|..| ++||.+ +++ +..+...+ . ...++++|||||++|+|+|..+.+++
T Consensus 159 ~p~~p~~i~g~~-~~~---~~~~~~~l-------------~-------~~~~~vvViGgG~ig~E~A~~l~~~g------ 208 (479)
T 2hqm_A 159 KAIFPENIPGFE-LGT---DSDGFFRL-------------E-------EQPKKVVVVGAGYIGIELAGVFHGLG------ 208 (479)
T ss_dssp EECCCTTSTTGG-GSB---CHHHHHHC-------------S-------SCCSEEEEECSSHHHHHHHHHHHHTT------
T ss_pred CCCCCCCCCCcc-ccc---chHHHhcc-------------c-------ccCCeEEEECCCHHHHHHHHHHHHcC------
Confidence 99999 899873 322 22222111 1 23459999999999999999999865
Q ss_pred hCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce--EEEEeCCCC-eEEEEecceE
Q 045826 252 LYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KE--ISTKDRATG-QISSIPYGMV 326 (584)
Q Consensus 252 ~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~--v~~~~~~~G-~~~~i~~D~v 326 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+.. .+| + ++++|.|
T Consensus 209 --------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~-~~G~~--~i~~D~v 277 (479)
T 2hqm_A 209 --------SETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHM-NDSKS--IDDVDEL 277 (479)
T ss_dssp --------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEE-TTSCE--EEEESEE
T ss_pred --------CceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEE-CCCcE--EEEcCEE
Confidence 7999999999999999999999999999999999999999999964 23 44433 347 4 4999999
Q ss_pred EEccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 327 VWSTGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 327 I~a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|+|+|.+++ + .| ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 278 v~a~G~~p~--~-~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 325 (479)
T 2hqm_A 278 IWTIGRKSH--L-GMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVG 325 (479)
T ss_dssp EECSCEEEC--C-CSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTT
T ss_pred EECCCCCCc--c-ccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCC
Confidence 999995444 4 45 566676 56789999999998 8999999999974
No 48
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=3.5e-34 Score=295.35 Aligned_cols=274 Identities=15% Similarity=0.211 Sum_probs=193.2
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC----CCCCCCccc----ccc--ccccCcccccHHHHHHHHHc
Q 045826 53 GEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN----YFAFTPLLP----SVT--NGTVEARSIVEPIRNIVRKK 122 (584)
Q Consensus 53 ~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~----~~~~~p~~~----~~~--~g~~~~~~i~~~~~~~~~~~ 122 (584)
...+++||||||||++|+++|..|++.|++|+|||+++ ..++..... .++ .......++...+.+.+.+.
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKF 97 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHc
Confidence 33456899999999999999999999999999999965 222221110 010 01122345666778888888
Q ss_pred CCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccc-cccCHHHHHHHHHH
Q 045826 123 GMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAH-FLKEVEHAQRIRRS 201 (584)
Q Consensus 123 g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~~~~~ 201 (584)
++ ++..++|..++.+.+.+.+..... .....+.||+||+|+|+.+..+.+||..++.. .+..... .
T Consensus 98 gv--~i~~~~v~~i~~~~~~~~v~~~~~-----~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~---~--- 164 (338)
T 3itj_A 98 GT--EIITETVSKVDLSSKPFKLWTEFN-----EDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAV---C--- 164 (338)
T ss_dssp TC--EEECSCEEEEECSSSSEEEEETTC-----SSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHH---H---
T ss_pred CC--EEEEeEEEEEEEcCCEEEEEEEec-----CCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchh---c---
Confidence 84 456667999999988777754210 00127899999999999999999999753211 1111100 0
Q ss_pred HHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHH
Q 045826 202 VIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITA 281 (584)
Q Consensus 202 l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~ 281 (584)
+.. .....+++++|||+|++|+|+|..|.+.+ .+|+++++.+.+++ .+
T Consensus 165 -----~~~-------~~~~~~~~v~vvG~G~~g~e~a~~l~~~g--------------~~v~~v~~~~~~~~------~~ 212 (338)
T 3itj_A 165 -----DGA-------VPIFRNKPLAVIGGGDSACEEAQFLTKYG--------------SKVFMLVRKDHLRA------ST 212 (338)
T ss_dssp -----HTT-------SGGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS------CH
T ss_pred -----ccc-------hhhcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCccCC------CH
Confidence 000 00135679999999999999999998754 79999999998766 23
Q ss_pred HHHHHHHhC-CcEEEeCCceeEEcCCe-----EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHH-hCCcCCCcee
Q 045826 282 SAEEKFKRD-GIDLKTGSMVVKLSDKE-----ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ-IGQANRRVLA 354 (584)
Q Consensus 282 ~~~~~L~~~-GV~v~~~~~V~~v~~~~-----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~l~~~g~i~ 354 (584)
.+.+.+.+. ||+++++++|++++.++ +++.+..+|+..++++|.||||+|+.++. .++.. +.++.+|+|.
T Consensus 213 ~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~ 289 (338)
T 3itj_A 213 IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPAT---KIVAGQVDTDEAGYIK 289 (338)
T ss_dssp HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECC---GGGBTTBCBCTTSCBC
T ss_pred HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCCh---hHhhCceEecCCCcEE
Confidence 445666655 99999999999997553 77776555665579999999999976654 33332 3336789998
Q ss_pred e-CCCCccCCCCCEEEeCcccc
Q 045826 355 T-DEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 355 V-d~~l~~~~~~~VfaiGD~a~ 375 (584)
| |.++++ +.|+|||+|||+.
T Consensus 290 v~~~~~~t-~~~~vya~GD~~~ 310 (338)
T 3itj_A 290 TVPGSSLT-SVPGFFAAGDVQD 310 (338)
T ss_dssp CCTTSSBC-SSTTEEECGGGGC
T ss_pred EcCccccc-CCCCEEEeeccCC
Confidence 5 778887 8999999999985
No 49
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.5e-33 Score=305.61 Aligned_cols=266 Identities=19% Similarity=0.256 Sum_probs=196.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc------------------------ccc--cccCc
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS------------------------VTN--GTVEA 108 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~------------------------~~~--g~~~~ 108 (584)
+.++||+|||||+||+++|..|++.|++|+|||++. +++...... +.. ...+.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 346899999999999999999999999999999773 433211100 000 01111
Q ss_pred cc-----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 109 RS-----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 109 ~~-----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
.. +...+...++..+ ++++.+++..++.....+.. ++ .++.||+||||||+.|..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~~~~~~~~v~~-~g----------~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSH--IEIIRGHAAFTSDPKPTIEV-SG----------KKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEECSCSSCEEEE-TT----------EEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEeEEEEeeCCeEEEEE-CC----------EEEEeeEEEEccCCCCCCC
Confidence 11 1122334455566 66788999988887777663 22 2799999999999999988
Q ss_pred ---CCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCc
Q 045826 178 ---NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYP 254 (584)
Q Consensus 178 ---~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~ 254 (584)
++||.. ++ .+.++.. .+. ...++++|||+|++|+|+|..+++++
T Consensus 164 ~~~~i~G~~-~~---~~~~~~~-------------~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g--------- 210 (478)
T 3dk9_A 164 HESQIPGAS-LG---ITSDGFF-------------QLE-------ELPGRSVIVGAGYIAVEMAGILSALG--------- 210 (478)
T ss_dssp CTTTSTTGG-GS---BCHHHHT-------------TCC-------SCCSEEEEECCSHHHHHHHHHHHHTT---------
T ss_pred CcCCCCCCc-ee---EchHHhh-------------chh-------hcCccEEEECCCHHHHHHHHHHHHcC---------
Confidence 899975 22 1222211 111 12459999999999999999999865
Q ss_pred CCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce--EEEEeCC--CCeE--EEEecceE
Q 045826 255 SLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KE--ISTKDRA--TGQI--SSIPYGMV 326 (584)
Q Consensus 255 ~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~--v~~~~~~--~G~~--~~i~~D~v 326 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+...+ +|+. .++++|.|
T Consensus 211 -----~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~v 285 (478)
T 3dk9_A 211 -----SKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL 285 (478)
T ss_dssp -----CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEE
T ss_pred -----CeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEE
Confidence 7999999999999999999999999999999999999999999963 34 4443322 2321 35999999
Q ss_pred EEccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 327 VWSTGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 327 I~a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|+|+|.+ |+...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 286 i~a~G~~--p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 334 (478)
T 3dk9_A 286 LWAIGRV--PNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCG 334 (478)
T ss_dssp EECSCEE--ESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEeeccc--cCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCC
Confidence 9999954 444334 566666 57899999999998 8999999999984
No 50
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=6.9e-34 Score=306.85 Aligned_cols=263 Identities=17% Similarity=0.269 Sum_probs=191.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc--------------------ccc-----cCcccc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT--------------------NGT-----VEARSI 111 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~--------------------~g~-----~~~~~i 111 (584)
.+||||||||+||+++|..|++.|++|+|||+++ +++......+. .+. .+...+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 4799999999999999999999999999999987 44321110000 000 111111
Q ss_pred cH-----------HHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC-C
Q 045826 112 VE-----------PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN-T 179 (584)
Q Consensus 112 ~~-----------~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~-i 179 (584)
.. .+...+++.+ ++++.+++..++. ++|.+. + .++.||+||+|||++|..|+ +
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~--~~v~v~-g----------~~~~~d~lViATGs~p~~p~gi 149 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNG--VELLRGFARLVGP--KEVEVG-G----------ERYGAKSLILATGSEPLELKGF 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEET-T----------EEEEEEEEEECCCEEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CEEEeeeEEEccC--CEEEEc-c----------EEEEeCEEEEcCCCCCCCCCCC
Confidence 11 1234556666 5577777777764 567664 2 17999999999999998775 7
Q ss_pred CCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCC
Q 045826 180 PGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEF 259 (584)
Q Consensus 180 pG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~ 259 (584)
|| .+. +.+..++..+.+ ...++++|||||++|+|+|..+++++
T Consensus 150 ~~-~~~---v~~~~~~~~l~~-------------------~~~~~vvViGgG~~g~e~A~~l~~~g-------------- 192 (464)
T 2eq6_A 150 PF-GED---VWDSTRALKVEE-------------------GLPKRLLVIGGGAVGLELGQVYRRLG-------------- 192 (464)
T ss_dssp CC-SSS---EECHHHHTCGGG-------------------CCCSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CC-CCc---EEcHHHHHhhhh-------------------hcCCEEEEECCCHHHHHHHHHHHHCC--------------
Confidence 76 222 224443322110 12459999999999999999998864
Q ss_pred cEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCC--CeEEEEecceEEEccCCCCC
Q 045826 260 TRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRAT--GQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 260 ~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~--G~~~~i~~D~vI~a~G~~~~ 335 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+.+....+ |+..++++|.||+|+|.+
T Consensus 193 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~-- 270 (464)
T 2eq6_A 193 AEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK-- 270 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE--
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc--
Confidence 7999999999999999999999999999999999999999999964 3344332113 653349999999999954
Q ss_pred chHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 336 PVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 336 p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|++..+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 271 p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 312 (464)
T 2eq6_A 271 PRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAAR 312 (464)
T ss_dssp ESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTC
T ss_pred cCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 444332 456666 56789999999998 8999999999985
No 51
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=4.4e-34 Score=289.10 Aligned_cols=258 Identities=15% Similarity=0.178 Sum_probs=188.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC-ccccccc-cccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP-LLPSVTN-GTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p-~~~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
++||+|||||++|+++|..|++.|++|+|||+++.....+ ..+.+.. ......++...+.+.+.+.+ .+++++++|+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~ 80 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYP-TIHWVEGRVT 80 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCT-TEEEEESCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcC-CeEEEEeEEE
Confidence 4799999999999999999999999999999876433222 1122221 22344466667777777763 3778889999
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccc-cccCHHHHHHHHHHHHHHHHHhcCCC
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAH-FLKEVEHAQRIRRSVIDCFERASLPN 213 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~~~~~l~~~~~~~~~~~ 213 (584)
.++++++...+....+ ..+.||+||+|||+.|+.|.+||..++.. .+.... . .+
T Consensus 81 ~i~~~~~~~~v~~~~g--------~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~----~----~~--------- 135 (297)
T 3fbs_A 81 DAKGSFGEFIVEIDGG--------RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP----Y----CH--------- 135 (297)
T ss_dssp EEEEETTEEEEEETTS--------CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH----H----HH---------
T ss_pred EEEEcCCeEEEEECCC--------CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc----c----Cc---------
Confidence 9998876555443321 17999999999999999999999764210 000000 0 00
Q ss_pred CCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcE
Q 045826 214 LSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGID 293 (584)
Q Consensus 214 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~ 293 (584)
.....+++++|||+|++|+|+|..|.+. + +|+++++.+.. +. +.+.+.|++.||+
T Consensus 136 ---~~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g-~v~~v~~~~~~---~~----~~~~~~l~~~gv~ 190 (297)
T 3fbs_A 136 ---GYELDQGKIGVIAASPMAIHHALMLPDW--------------G-ETTFFTNGIVE---PD----ADQHALLAARGVR 190 (297)
T ss_dssp ---TGGGTTCEEEEECCSTTHHHHHHHGGGT--------------S-EEEEECTTTCC---CC----HHHHHHHHHTTCE
T ss_pred ---chhhcCCEEEEEecCccHHHHHHHhhhc--------------C-cEEEEECCCCC---CC----HHHHHHHHHCCcE
Confidence 0113467999999999999999998753 3 89999988752 22 3456788899999
Q ss_pred EEeCCceeEEcCC-eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--c--CCC-ceeeCCCCccCCCCCE
Q 045826 294 LKTGSMVVKLSDK-EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--A--NRR-VLATDEWLRVEGCESV 367 (584)
Q Consensus 294 v~~~~~V~~v~~~-~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~--~~g-~i~Vd~~l~~~~~~~V 367 (584)
++. ++|++++.+ .+++. +|++ +++|.||||+|+.++. .+++.+++ + .+| ++.||+++++ +.|+|
T Consensus 191 i~~-~~v~~i~~~~~v~~~---~g~~--~~~D~vi~a~G~~p~~---~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~v 260 (297)
T 3fbs_A 191 VET-TRIREIAGHADVVLA---DGRS--IALAGLFTQPKLRITV---DWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGI 260 (297)
T ss_dssp EEC-SCEEEEETTEEEEET---TSCE--EEESEEEECCEEECCC---SCHHHHTCCEEEETTEEEECCCTTCBC-SSTTE
T ss_pred EEc-ceeeeeecCCeEEeC---CCCE--EEEEEEEEccCcccCc---hhHHhcCCccccCCCCceEEeCCCCcc-CCCCE
Confidence 996 999999887 45554 3765 9999999999976543 35566666 2 356 8999999998 89999
Q ss_pred EEeCcccc
Q 045826 368 YALGDCAT 375 (584)
Q Consensus 368 faiGD~a~ 375 (584)
||+|||+.
T Consensus 261 ya~GD~~~ 268 (297)
T 3fbs_A 261 FACGDVAR 268 (297)
T ss_dssp EECSGGGC
T ss_pred EEEeecCC
Confidence 99999985
No 52
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1.5e-33 Score=287.79 Aligned_cols=264 Identities=16% Similarity=0.154 Sum_probs=186.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCCCCCCCCcc----cccc--ccccCcccccHHHHHHHHHcCCcEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRNYFAFTPLL----PSVT--NGTVEARSIVEPIRNIVRKKGMDIQFK 129 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~~~~~~p~~----~~~~--~g~~~~~~i~~~~~~~~~~~g~~v~~~ 129 (584)
+++|+|||||++|+++|..|++.|+ +|+|||++. +++.... ...+ .......++...+.+.+.+.+++ ++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~--~~ 77 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLK--HE 77 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCE--EE
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCE--EE
Confidence 3689999999999999999999999 999999963 3322111 1111 01123345566677777777744 45
Q ss_pred EEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHHHHHH
Q 045826 130 EAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVIDCFER 208 (584)
Q Consensus 130 ~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~~~~~ 208 (584)
.++|..++.+.+.+.+....+ ..+.||+||+|+|+.+..|++||..++. ..+..... . +.
T Consensus 78 ~~~v~~i~~~~~~~~v~~~~g--------~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~-------~----~~ 138 (311)
T 2q0l_A 78 MTAVQRVSKKDSHFVILAEDG--------KTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCAT-------C----DG 138 (311)
T ss_dssp CSCEEEEEEETTEEEEEETTS--------CEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHH-------H----HG
T ss_pred EEEEEEEEEcCCEEEEEEcCC--------CEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeec-------C----Ch
Confidence 588999998877444432221 1799999999999999999999875321 00111110 0 00
Q ss_pred hcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHH
Q 045826 209 ASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFK 288 (584)
Q Consensus 209 ~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~ 288 (584)
....+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+. .++. +.+.+.
T Consensus 139 ---------~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~--~~~~----~~~~l~ 189 (311)
T 2q0l_A 139 ---------FFYKNKEVAVLGGGDTAVEEAIYLANIC--------------KKVYLIHRRDGFR--CAPI----TLEHAK 189 (311)
T ss_dssp ---------GGGTTSEEEEECCSHHHHHHHHHHHTTS--------------SEEEEECSSSSCC--SCHH----HHHHHH
T ss_pred ---------hhcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeeCCccC--CCHH----HHHHHh
Confidence 0124569999999999999999998754 7999999998763 3333 334454
Q ss_pred -hCCcEEEeCCceeEEcCC-----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhC----C--cCCCceeeC
Q 045826 289 -RDGIDLKTGSMVVKLSDK-----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIG----Q--ANRRVLATD 356 (584)
Q Consensus 289 -~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~----l--~~~g~i~Vd 356 (584)
+.||++++++++++++.+ ++++.+..+|+..++++|.||+|+|+.++. .+++..+ + +.+|+|.||
T Consensus 190 ~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~g~~~~l~~~~~g~i~vd 266 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNN---AVLKQEDNSMLCKCDEYGSIVVD 266 (311)
T ss_dssp TCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECC---GGGBCTTSCBSSCBCTTSCBCCC
T ss_pred hCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccCh---hhhhcccccceeEeccCCCEEeC
Confidence 479999999999999654 356654335765569999999999965543 3444443 4 567999999
Q ss_pred CCCccCCCCCEEEeCcccc
Q 045826 357 EWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 357 ~~l~~~~~~~VfaiGD~a~ 375 (584)
+++|| +.|+|||+|||+.
T Consensus 267 ~~~~t-~~~~vya~GD~~~ 284 (311)
T 2q0l_A 267 FSMKT-NVQGLFAAGDIRI 284 (311)
T ss_dssp TTCBC-SSTTEEECSTTBT
T ss_pred Ccccc-CCCCeEEcccccC
Confidence 99998 8999999999986
No 53
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.3e-33 Score=306.71 Aligned_cols=269 Identities=17% Similarity=0.226 Sum_probs=195.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC--------CCCCCCCccccc------------------------c-
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR--------NYFAFTPLLPSV------------------------T- 102 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~--------~~~~~~p~~~~~------------------------~- 102 (584)
..+||+|||||+||+++|..|++.|++|+|||++ ..+++......+ .
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 3579999999999999999999999999999973 334443211100 0
Q ss_pred --ccccCcccccHH-----------HHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEc
Q 045826 103 --NGTVEARSIVEP-----------IRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIA 169 (584)
Q Consensus 103 --~g~~~~~~i~~~-----------~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlA 169 (584)
....+...+... +...+...+ ++++.+++..+++.. +.+.... .+..++.||+||||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--V~~i~g~~~~~~~~~--v~v~~~~------g~~~~~~~d~lViA 154 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRK--VKYFNIKASFVDEHT--VRGVDKG------GKATLLSAEHIVIA 154 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECCEEEESSSSE--EEEECTT------SCEEEEEEEEEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEccCCe--EEEEeCC------CceEEEECCEEEEc
Confidence 001111111111 233455556 668899998888664 4443321 11248999999999
Q ss_pred cCCCCCCCC-CCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHh
Q 045826 170 MGAQANTFN-TPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDD 248 (584)
Q Consensus 170 tGs~~~~~~-ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~ 248 (584)
||+.|..|+ +||..++.+ +..+.. .+. ...++++|||+|++|+|+|..+++++
T Consensus 155 TGs~p~~p~~i~G~~~~~~---~~~~~~-------------~~~-------~~~~~vvViGgG~ig~E~A~~l~~~g--- 208 (488)
T 3dgz_A 155 TGGRPRYPTQVKGALEYGI---TSDDIF-------------WLK-------ESPGKTLVVGASYVALECAGFLTGIG--- 208 (488)
T ss_dssp CCEEECCCSSCBTHHHHCB---CHHHHT-------------TCS-------SCCCSEEEECCSHHHHHHHHHHHHTT---
T ss_pred CCCCCCCCCCCCCcccccC---cHHHHH-------------hhh-------hcCCeEEEECCCHHHHHHHHHHHHcC---
Confidence 999999998 999865433 222111 111 23458999999999999999999865
Q ss_pred HhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC---Ce--EEEEeCCCCeEEEEec
Q 045826 249 LSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD---KE--ISTKDRATGQISSIPY 323 (584)
Q Consensus 249 ~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~--v~~~~~~~G~~~~i~~ 323 (584)
.+|+++++. .+++.+++++.+.+.+.|++.||++++++.+++++. +. +++.+..+|+..++++
T Consensus 209 -----------~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~ 276 (488)
T 3dgz_A 209 -----------LDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTF 276 (488)
T ss_dssp -----------CCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEE
T ss_pred -----------CceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEEC
Confidence 799999986 588999999999999999999999999999999853 32 4455544466556899
Q ss_pred ceEEEccCCCCCchHHHH-HHHhCC--c-CCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 324 GMVVWSTGIGTRPVIMDF-MKQIGQ--A-NRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 324 D~vI~a~G~~~~p~~~~l-~~~~~l--~-~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|.||+|+|.+ |+...+ ++..++ + .+|+|.||+++|| +.|+|||+|||+.
T Consensus 277 D~vi~a~G~~--p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 329 (488)
T 3dgz_A 277 DTVLWAIGRV--PETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAE 329 (488)
T ss_dssp SEEEECSCEE--ESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBT
T ss_pred CEEEEcccCC--cccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecC
Confidence 9999999954 544433 556666 5 6799999999998 8999999999984
No 54
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.4e-33 Score=287.46 Aligned_cols=263 Identities=18% Similarity=0.227 Sum_probs=188.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc----ccccc-cccCcccccHHHHHHHHHcCCcEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL----PSVTN-GTVEARSIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~----~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
.+||+|||||++|+++|..|++.|++|+|||+.. .++.... ...+. ......++...+.+.+.+.+ ++++.+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~ 92 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYA--KIREGV 92 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTS--EEEETC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcC--CEEEEe
Confidence 4799999999999999999999999999999953 3322111 11111 11222344555666777777 556668
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHHHHHHhc
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVIDCFERAS 210 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~~~~~~~ 210 (584)
+|..++.+.+.+.+.... ..+.||+||+|+|+.+..+++||..++. ..+..... . +
T Consensus 93 ~v~~i~~~~~~~~v~~~~---------~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~-------~-~------ 149 (319)
T 3cty_A 93 EVRSIKKTQGGFDIETND---------DTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCST-------C-D------ 149 (319)
T ss_dssp CEEEEEEETTEEEEEESS---------SEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHH-------H-H------
T ss_pred eEEEEEEeCCEEEEEECC---------CEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEe-------c-c------
Confidence 899999877755443321 1789999999999999988898875421 01111100 0 0
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhC
Q 045826 211 LPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRD 290 (584)
Q Consensus 211 ~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~ 290 (584)
.....+++++|||+|++|+|+|..|.+.+ .+|+++++.+.+.. ++ .+.+.+++.
T Consensus 150 ------~~~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~i~~~~~~~~--~~----~l~~~l~~~ 203 (319)
T 3cty_A 150 ------GYLFKGKRVVTIGGGNSGAIAAISMSEYV--------------KNVTIIEYMPKYMC--EN----AYVQEIKKR 203 (319)
T ss_dssp ------GGGGBTSEEEEECCSHHHHHHHHHHTTTB--------------SEEEEECSSSSCCS--CH----HHHHHHHHT
T ss_pred ------hhhcCCCeEEEECCCHHHHHHHHHHHhhC--------------CcEEEEEcCCccCC--CH----HHHHHHhcC
Confidence 00134579999999999999999998753 79999999887643 23 345666789
Q ss_pred CcEEEeCCceeEEcCC-----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCccCC
Q 045826 291 GIDLKTGSMVVKLSDK-----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVEG 363 (584)
Q Consensus 291 GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~~~~ 363 (584)
||+++++++|+++..+ ++.+.+..+|+..++++|.||||+|+.++. .+++.+++ +.+|+|.||+++|+ +
T Consensus 204 gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~gl~~~~~g~i~vd~~~~t-~ 279 (319)
T 3cty_A 204 NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQT---SFLKDSGVKLDERGYIVVDSRQRT-S 279 (319)
T ss_dssp TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECC---GGGTTSCCCBCTTSCBCCCTTCBC-S
T ss_pred CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccCh---HHHhhccccccCCccEeCCCCCcc-C
Confidence 9999999999999654 356654335765569999999999965553 35555555 56799999999997 8
Q ss_pred CCCEEEeCcccc
Q 045826 364 CESVYALGDCAT 375 (584)
Q Consensus 364 ~~~VfaiGD~a~ 375 (584)
.|+|||+|||+.
T Consensus 280 ~~~vya~GD~~~ 291 (319)
T 3cty_A 280 VPGVYAAGDVTS 291 (319)
T ss_dssp STTEEECSTTBT
T ss_pred CCCEEEeecccC
Confidence 999999999985
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.4e-33 Score=286.60 Aligned_cols=264 Identities=17% Similarity=0.182 Sum_probs=179.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc----cccccc-ccCcccccHHHHHHHHHcCCcEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL----PSVTNG-TVEARSIVEPIRNIVRKKGMDIQFKEA 131 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~----~~~~~g-~~~~~~i~~~~~~~~~~~g~~v~~~~~ 131 (584)
.+|||||||||||++||.+|++.|++|+|||+.. .+++... +.++.. .....++.........+....+ ....
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 83 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVY-QYGD 83 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEE-EECC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccc-ccee
Confidence 5899999999999999999999999999999863 3433222 111111 1112233444445555555332 2233
Q ss_pred EEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHHHHHHhc
Q 045826 132 ECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVIDCFERAS 210 (584)
Q Consensus 132 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~~~~~~~ 210 (584)
.+...+.....+...++. ++.||+||||||++|+.|++||.++.. ..+.... ..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~----------~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~--------~~~------ 139 (312)
T 4gcm_A 84 IKSVEDKGEYKVINFGNK----------ELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCA--------VCD------ 139 (312)
T ss_dssp CCEEEECSSCEEEECSSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH--------HHH------
T ss_pred eeeeeeeecceeeccCCe----------EEEeceeEEcccCccCcCCCCChhhhCCccEEeee--------ccC------
Confidence 344445544444443332 899999999999999999999976421 1111110 000
Q ss_pred CCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhC
Q 045826 211 LPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRD 290 (584)
Q Consensus 211 ~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~ 290 (584)
....++++++|||||++|+|+|..|++++ .+|+++++.+++++.... ..+.+++.
T Consensus 140 ------~~~~~~k~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~~-----~~~~~~~~ 194 (312)
T 4gcm_A 140 ------GAFFKNKRLFVIGGGDSAVEEGTFLTKFA--------------DKVTIVHRRDELRAQRIL-----QDRAFKND 194 (312)
T ss_dssp ------GGGGTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCCSCHHH-----HHHHHHCT
T ss_pred ------ccccCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEecccccCcchhH-----HHHHHHhc
Confidence 01134569999999999999999998765 799999999998875322 23567778
Q ss_pred CcEEEeCCceeEEcCC-----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC-cCCCceeeCCCCccCCC
Q 045826 291 GIDLKTGSMVVKLSDK-----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLATDEWLRVEGC 364 (584)
Q Consensus 291 GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~Vd~~l~~~~~ 364 (584)
++.+.....+..+... ........+++...+++|.|++++|..++ . .+....++ +++|+|.||+++|| +.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~--~-~~~~~~g~~~~~G~I~vd~~~~T-s~ 270 (312)
T 4gcm_A 195 KIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPL--T-APFKDLGITNDVGYIVTKDDMTT-SV 270 (312)
T ss_dssp TEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEES--C-GGGGGGTCBCTTSCBCCCTTSBC-SS
T ss_pred CcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcC--c-hhHHhcceecCCCeEeeCCCCcc-CC
Confidence 8888887776665321 12233333455556999999999995444 3 45566676 67899999999999 89
Q ss_pred CCEEEeCcccc
Q 045826 365 ESVYALGDCAT 375 (584)
Q Consensus 365 ~~VfaiGD~a~ 375 (584)
|+|||+|||+.
T Consensus 271 pgIyA~GDv~~ 281 (312)
T 4gcm_A 271 PGIFAAGDVRD 281 (312)
T ss_dssp TTEEECSTTBS
T ss_pred CCEEEEeecCC
Confidence 99999999985
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=9.8e-34 Score=295.48 Aligned_cols=266 Identities=16% Similarity=0.215 Sum_probs=191.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc--c-----ccccc-cccCcccccHHHHHHHHHcCCcEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL--L-----PSVTN-GTVEARSIVEPIRNIVRKKGMDIQ 127 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~--~-----~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~ 127 (584)
.++||||||||++|+++|..|++.|++|+|||+++.+++... . +..+. ......++...+.+.+.+.++.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~- 91 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV- 91 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE-
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE-
Confidence 357999999999999999999999999999999887654321 0 11110 01122345556677777777544
Q ss_pred EEEEEEEEEecCCC-EEEEeecCccCCCCCceEEEeCCEEEEccCC---CCCCCCCCC-ccccc----c-cccCHHHHHH
Q 045826 128 FKEAECYKIDAEKK-QIYCRTTEDRTCGGKEEFALDYDILVIAMGA---QANTFNTPG-VVEHA----H-FLKEVEHAQR 197 (584)
Q Consensus 128 ~~~~~v~~id~~~~-~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs---~~~~~~ipG-~~~~~----~-~~~~~~~a~~ 197 (584)
+...+|+.++...+ .+.+....+ ..+.||+||+|+|+ .|..+++|| .++.. + .+++.
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~~g--------~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~----- 158 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTNTG--------NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSV----- 158 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEETTS--------CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCG-----
T ss_pred EcCCEEEEEEECCCceEEEEECCC--------cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCH-----
Confidence 23568999988654 333332221 17999999999999 566667777 54321 0 01111
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccH
Q 045826 198 IRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDK 277 (584)
Q Consensus 198 ~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~ 277 (584)
....+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+++. +
T Consensus 159 --------------------~~~~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~~--~ 202 (360)
T 3ab1_A 159 --------------------EDFKGKRVVIVGGGDSALDWTVGLIKNA--------------ASVTLVHRGHEFQGH--G 202 (360)
T ss_dssp --------------------GGGTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCSSC--S
T ss_pred --------------------HHcCCCcEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCCCCCC--H
Confidence 1124569999999999999999987653 799999999887664 3
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEcCC-----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC-cCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLSDK-----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRR 351 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g 351 (584)
...+.+.+.+++.||+++++++|++++.+ ++.+. ..+|+..++++|.||+|+|+.++. .+++.+++ .++|
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~~~~~~~g 278 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIGFKSNL---GPLARWDLELYEN 278 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCCBCCSC---GGGGGSSCCEETT
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCCCCCCH---HHHHhhccccccC
Confidence 56677788889999999999999999643 45555 234754469999999999976554 35556666 2478
Q ss_pred ceeeCCCCccCCCCCEEEeCccccc
Q 045826 352 VLATDEWLRVEGCESVYALGDCATI 376 (584)
Q Consensus 352 ~i~Vd~~l~~~~~~~VfaiGD~a~~ 376 (584)
+|.||+++|| +.|+|||+|||+..
T Consensus 279 ~i~vd~~~~t-~~~~vya~GD~~~~ 302 (360)
T 3ab1_A 279 ALVVDSHMKT-SVDGLYAAGDIAYY 302 (360)
T ss_dssp EEECCTTSBC-SSTTEEECSTTEEC
T ss_pred eeeecCCCcC-CCCCEEEecCccCC
Confidence 9999999998 89999999999874
No 57
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.4e-33 Score=288.92 Aligned_cols=267 Identities=17% Similarity=0.207 Sum_probs=191.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccc----cccc--cccCcccccHHHHHHHHHcCCcEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLP----SVTN--GTVEARSIVEPIRNIVRKKGMDIQFK 129 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~----~~~~--g~~~~~~i~~~~~~~~~~~g~~v~~~ 129 (584)
.++||+|||||+||+++|..|++.|++|+|||+. ..++..... ..+. ..+...++...+...+.+.+ ++++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 80 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFE--TEII 80 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTT--CEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCC--CEEE
Confidence 3579999999999999999999999999999975 233211110 0100 01222345556677777777 4466
Q ss_pred EEEEEEEecCCCEEEE-eecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHHHHH
Q 045826 130 EAECYKIDAEKKQIYC-RTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVIDCFE 207 (584)
Q Consensus 130 ~~~v~~id~~~~~v~~-~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~~~~ 207 (584)
.++|..++.+.+.+.+ .++. .+.||+||+|+|+.|..|++||..++. ..+..... . +
T Consensus 81 ~~~v~~i~~~~~~~~v~~~~~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~--------~ 139 (320)
T 1trb_A 81 FDHINKVDLQNRPFRLNGDNG----------EYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---S--------D 139 (320)
T ss_dssp CCCEEEEECSSSSEEEEESSC----------EEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---H--------H
T ss_pred EeeeeEEEecCCEEEEEeCCC----------EEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---C--------C
Confidence 6779999987776654 2221 799999999999999888888865321 01111110 0 0
Q ss_pred HhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHH
Q 045826 208 RASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKF 287 (584)
Q Consensus 208 ~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L 287 (584)
. ....+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+.. ++.+.+.+.+.+
T Consensus 140 ~---------~~~~~~~v~ViG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~--~~~~~~~l~~~l 194 (320)
T 1trb_A 140 G---------FFYRNQKVAVIGGGNTAVEEALYLSNIA--------------SEVHLIHRRDGFRA--EKILIKRLMDKV 194 (320)
T ss_dssp G---------GGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCC--CHHHHHHHHHHH
T ss_pred c---------cccCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCcccc--CHHHHHHHHHhc
Confidence 0 0134569999999999999999998754 79999999987754 577888888999
Q ss_pred HhCCcEEEeCCceeEEcCCe-----EEEEeCCC-CeEEEEecceEEEccCCCCCchHHHHHH-HhCCcCCCceeeCCCC-
Q 045826 288 KRDGIDLKTGSMVVKLSDKE-----ISTKDRAT-GQISSIPYGMVVWSTGIGTRPVIMDFMK-QIGQANRRVLATDEWL- 359 (584)
Q Consensus 288 ~~~GV~v~~~~~V~~v~~~~-----v~~~~~~~-G~~~~i~~D~vI~a~G~~~~p~~~~l~~-~~~l~~~g~i~Vd~~l- 359 (584)
++.||+++++++|++++.++ +++.+..+ |+..++++|.||+|+|+.+++ .+++ .+.++ +|+|.||+++
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~---~~~~~~l~~~-~G~i~vd~~~~ 270 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNT---AIFEGQLELE-NGYIKVQSGIH 270 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESC---GGGTTTSCEE-TTEECCCCSSS
T ss_pred ccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCCh---HHhccccccc-CceEEECCCcc
Confidence 99999999999999996543 66654323 433359999999999976554 2333 23336 8999999997
Q ss_pred ---ccCCCCCEEEeCcccc
Q 045826 360 ---RVEGCESVYALGDCAT 375 (584)
Q Consensus 360 ---~~~~~~~VfaiGD~a~ 375 (584)
+.++.|+|||+|||+.
T Consensus 271 ~~~~~t~~~~vya~GD~~~ 289 (320)
T 1trb_A 271 GNATQTSIPGVFAAGDVMD 289 (320)
T ss_dssp SCTTBCSSTTEEECGGGGC
T ss_pred cccccCCCCCEEEcccccC
Confidence 2338999999999986
No 58
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.1e-33 Score=305.11 Aligned_cols=260 Identities=22% Similarity=0.317 Sum_probs=193.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc------------------------cccc--ccCccc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS------------------------VTNG--TVEARS 110 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~------------------------~~~g--~~~~~~ 110 (584)
++||+|||||+||+++|.+|++.|++|+|||+++ .++...... +... ..+...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 5799999999999999999999999999999983 443321100 0000 011111
Q ss_pred -----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCC
Q 045826 111 -----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT 179 (584)
Q Consensus 111 -----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~i 179 (584)
+...+...+.+.+ ++++.+++..++. +.|.+ ++ ..+.||+||+|||+.|..|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~--~~v~~-~g----------~~~~~d~lviAtGs~p~~p~i 147 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLG--ITRVDGHARFVDA--HTIEV-EG----------QRLSADHIVIATGGRPIVPRL 147 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEE-TT----------EEEEEEEEEECCCEEECCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--CEEEEeEEEEccC--CEEEE-CC----------EEEEcCEEEECCCCCCCCCCC
Confidence 1112334455666 6678888888875 46766 22 279999999999999999999
Q ss_pred CCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCC
Q 045826 180 PGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEF 259 (584)
Q Consensus 180 pG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~ 259 (584)
||. +++ .+..++..+ . ...++++|||||++|+|+|..|.+++
T Consensus 148 ~G~-~~~---~~~~~~~~~-------------~-------~~~~~vvVvGgG~~g~e~A~~l~~~G-------------- 189 (463)
T 2r9z_A 148 PGA-ELG---ITSDGFFAL-------------Q-------QQPKRVAIIGAGYIGIELAGLLRSFG-------------- 189 (463)
T ss_dssp TTG-GGS---BCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCc-cce---ecHHHHhhh-------------h-------ccCCEEEEECCCHHHHHHHHHHHhcC--------------
Confidence 997 332 233322211 1 12459999999999999999998865
Q ss_pred cEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCch
Q 045826 260 TRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPV 337 (584)
Q Consensus 260 ~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~ 337 (584)
.+|+++++.+++++.+++.+.+.+.+.+++.||+++++++|++++. +++.+.. .+|+. ++++|.||+|+|.+ |+
T Consensus 190 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~G~~-~i~~D~vv~a~G~~--p~ 265 (463)
T 2r9z_A 190 SEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVA-QDGTR-LEGFDSVIWAVGRA--PN 265 (463)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEE-TTCCE-EEEESEEEECSCEE--ES
T ss_pred CEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEE-eCCcE-EEEcCEEEECCCCC--cC
Confidence 7999999999999999999999999999999999999999999964 3444443 34762 39999999999954 44
Q ss_pred HHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 338 IMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 338 ~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+..+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 266 ~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 305 (463)
T 2r9z_A 266 TRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITG 305 (463)
T ss_dssp CTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGT
T ss_pred CCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCC
Confidence 4333 456666 56899999999998 8999999999974
No 59
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=4.3e-33 Score=284.19 Aligned_cols=261 Identities=20% Similarity=0.324 Sum_probs=185.4
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc----cccccc-cccCcccccHHHHHHHHHcCCcEEEEEE-
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL----LPSVTN-GTVEARSIVEPIRNIVRKKGMDIQFKEA- 131 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~----~~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~~~~- 131 (584)
+||+|||||++|+++|..|++.|++|+|||+. .++... ++.... .......+...+.+.+++.+ ++++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~ 77 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYD--VDVIDSQ 77 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSC--EEEECSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcC--CeEEccC
Confidence 68999999999999999999999999999874 222211 111111 11122345556777777776 666666
Q ss_pred EEEEEecCC-----CEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccc-cccCHHHHHHHHHHHHHH
Q 045826 132 ECYKIDAEK-----KQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAH-FLKEVEHAQRIRRSVIDC 205 (584)
Q Consensus 132 ~v~~id~~~-----~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~-~~~~~~~a~~~~~~l~~~ 205 (584)
+|+.++++. ..|.+.++. .+.||+||+|+|+.|..|++||..++.. .+..... +
T Consensus 78 ~v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~-------~--- 137 (310)
T 1fl2_A 78 SASKLIPAAVEGGLHQIETASGA----------VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH-------C--- 137 (310)
T ss_dssp CEEEEECCSSTTCCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH-------H---
T ss_pred EEEEEEecccCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc-------C---
Confidence 899998753 244443322 7999999999999998888998754311 1111110 0
Q ss_pred HHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHH
Q 045826 206 FERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEE 285 (584)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~ 285 (584)
+ .....+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+. +++ .+.+
T Consensus 138 -~---------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~--~~~----~~~~ 187 (310)
T 1fl2_A 138 -D---------GPLFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMK--ADQ----VLQD 187 (310)
T ss_dssp -H---------GGGGBTCEEEEECCSHHHHHHHHHHHTTB--------------SEEEEECSSSSCC--SCH----HHHH
T ss_pred -c---------HhhcCCCEEEEECCCHHHHHHHHHHHHhC--------------CEEEEEEeCcccC--ccH----HHHH
Confidence 0 01135679999999999999999988753 7999999998773 333 3456
Q ss_pred HHHh-CCcEEEeCCceeEEcCC-----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHH-hCCcCCCceeeCCC
Q 045826 286 KFKR-DGIDLKTGSMVVKLSDK-----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ-IGQANRRVLATDEW 358 (584)
Q Consensus 286 ~L~~-~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~l~~~g~i~Vd~~ 358 (584)
.|++ .||++++++++++++.+ ++++.+..+|+..++++|.||+|+|+.++. .++.+ +.++.+|+|.||++
T Consensus 188 ~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~l~~~~~g~i~vd~~ 264 (310)
T 1fl2_A 188 KLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNT---NWLEGAVERNRMGEIIIDAK 264 (310)
T ss_dssp HHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESC---GGGTTTSCBCTTSCBCCCTT
T ss_pred HHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCc---hHHhccccccCCCcEEcCCC
Confidence 6776 69999999999999754 466665445665569999999999965543 23333 33467789999999
Q ss_pred CccCCCCCEEEeCccccc
Q 045826 359 LRVEGCESVYALGDCATI 376 (584)
Q Consensus 359 l~~~~~~~VfaiGD~a~~ 376 (584)
+|+ +.|+|||+|||+..
T Consensus 265 ~~t-~~~~vya~GD~~~~ 281 (310)
T 1fl2_A 265 CET-NVKGVFAAGDCTTV 281 (310)
T ss_dssp CBC-SSTTEEECSTTBSC
T ss_pred Ccc-CCCCEEEeecccCC
Confidence 997 89999999999863
No 60
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.7e-34 Score=308.95 Aligned_cols=268 Identities=20% Similarity=0.300 Sum_probs=196.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccC---CCeEEEEcCCCCCCCCCcccc-------------------cc-ccc--------
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN---SFEVQVVSPRNYFAFTPLLPS-------------------VT-NGT-------- 105 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~---g~~V~lid~~~~~~~~p~~~~-------------------~~-~g~-------- 105 (584)
.+||||||||+||+++|..|++. |++|+|||+++ +++...... .. .+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 36999999999999999999977 99999999987 443211100 00 011
Q ss_pred cCccc-----------ccHHHHHHHHHcCCcEEEEEEEEEEEecC----CCEEEEeecCccCCCCCceEEEeCCEEEEcc
Q 045826 106 VEARS-----------IVEPIRNIVRKKGMDIQFKEAECYKIDAE----KKQIYCRTTEDRTCGGKEEFALDYDILVIAM 170 (584)
Q Consensus 106 ~~~~~-----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAt 170 (584)
.+... +...+.+++++.+ ++++.+++..+++. ++.+.+.... + +...+.||+||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~~~~~~~~~~~V~~~~-----g-~~~~~~~d~lviAT 152 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMG--VQVIAGRGELIDSTPGLARHRIKATAAD-----G-STSEHEADVVLVAT 152 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEECCSSSCCSSEEEEEECTT-----S-CEEEEEESEEEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCcccCCCCEEEEEeCC-----C-cEEEEEeCEEEEcC
Confidence 11111 1122456666777 55778888888873 2455554322 1 11379999999999
Q ss_pred CCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHh
Q 045826 171 GAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLS 250 (584)
Q Consensus 171 Gs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~ 250 (584)
|+.|..|++||.+... +.+..++. .+. ...++++|||+|++|+|+|..+.+++
T Consensus 153 Gs~p~~p~i~g~~~~~--v~~~~~~~-------------~~~-------~~~~~vvViGgG~ig~E~A~~l~~~g----- 205 (499)
T 1xdi_A 153 GASPRILPSAQPDGER--ILTWRQLY-------------DLD-------ALPDHLIVVGSGVTGAEFVDAYTELG----- 205 (499)
T ss_dssp CEEECCCGGGCCCSSS--EEEGGGGG-------------GCS-------SCCSSEEEESCSHHHHHHHHHHHHTT-----
T ss_pred CCCCCCCCCCCCCcCc--EEehhHhh-------------hhh-------ccCCeEEEECCCHHHHHHHHHHHHcC-----
Confidence 9999988888875321 11111111 111 13469999999999999999998865
Q ss_pred hhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEE
Q 045826 251 KLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVW 328 (584)
Q Consensus 251 ~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~ 328 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ ++.+.. .+|++ +++|.||+
T Consensus 206 ---------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vv~ 273 (499)
T 1xdi_A 206 ---------VPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTM-TDGRT--VEGSHALM 273 (499)
T ss_dssp ---------CCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEE-TTSCE--EEESEEEE
T ss_pred ---------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEE-CCCcE--EEcCEEEE
Confidence 79999999999999999999999999999999999999999999643 366654 34654 99999999
Q ss_pred ccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 329 STGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 329 a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|+|.+++ ...+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 274 a~G~~p~--~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 320 (499)
T 1xdi_A 274 TIGSVPN--TSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTG 320 (499)
T ss_dssp CCCEEEC--CSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGT
T ss_pred CCCCCcC--CCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 9996544 3222 455666 56789999999998 8999999999985
No 61
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.4e-33 Score=304.04 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=190.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc-------------------c----ccc------c
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV-------------------T----NGT------V 106 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~-------------------~----~g~------~ 106 (584)
.++||||||||+||+++|..|++.|++|+|||+ +.+++......+ . .|. .
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 357999999999999999999999999999999 445433211000 0 111 1
Q ss_pred CcccccH-----------HHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCC
Q 045826 107 EARSIVE-----------PIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQAN 175 (584)
Q Consensus 107 ~~~~i~~-----------~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~ 175 (584)
+...+.. .+..++++.+ ++++.+++..++. ++|.+.+ ..+.||+||||||++|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~~~~--~~v~v~~-----------~~~~~d~lviATGs~p~ 147 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHG--VKVVHGWAKVLDG--KQVEVDG-----------QRIQCEHLLLATGSSSV 147 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSCEEEEET--TEEEETT-----------EEEECSEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEEEEEEccC--CEEEEee-----------EEEEeCEEEEeCCCCCC
Confidence 1111111 1335566677 5567777776663 5776642 28999999999999987
Q ss_pred CCC-CCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCc
Q 045826 176 TFN-TPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYP 254 (584)
Q Consensus 176 ~~~-ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~ 254 (584)
.|+ +| .+. .+.+..++.. +. ..+++++|||||++|+|+|..|++.+
T Consensus 148 ~~~~~~-~~~---~v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~g--------- 194 (458)
T 1lvl_A 148 ELPMLP-LGG---PVISSTEALA-------------PK-------ALPQHLVVVGGGYIGLELGIAYRKLG--------- 194 (458)
T ss_dssp CBTTBC-CBT---TEECHHHHTC-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHHT---------
T ss_pred CCCCCC-ccC---cEecHHHHhh-------------hh-------ccCCeEEEECcCHHHHHHHHHHHHCC---------
Confidence 665 55 222 2233332211 11 13469999999999999999999875
Q ss_pred CCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 255 SLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 255 ~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+|+++++.+++++.+++++.+.+.+.+++.||+++++++|++++.+++.+. ..+|+..++++|.||+|+|.++
T Consensus 195 -----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~-~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 195 -----AQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLAN-DGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp -----CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEE-CSSSCCCEECCSCEEECCCEEE
T ss_pred -----CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEE-ECCCceEEEECCEEEECcCCCc
Confidence 7999999999999999999999999999999999999999999987556665 2346323499999999999654
Q ss_pred CchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 335 RPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 335 ~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+ ...+ ++..++ +.+ +|.||+++|| +.|+|||+|||+.
T Consensus 269 ~--~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~ 308 (458)
T 1lvl_A 269 R--TKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAG 308 (458)
T ss_dssp C--CSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGC
T ss_pred C--CCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCC
Confidence 4 3222 455666 445 8999999997 8999999999985
No 62
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=8.6e-33 Score=299.92 Aligned_cols=267 Identities=21% Similarity=0.275 Sum_probs=192.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC---------CCCCCCcccc------------------------cc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN---------YFAFTPLLPS------------------------VT 102 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~---------~~~~~p~~~~------------------------~~ 102 (584)
..+||+|||||+||+++|..|++.|++|+|||+.. .+++...... +.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 46899999999999999999999999999999421 1333221110 00
Q ss_pred c---cccCcccccHH-----------HHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEE
Q 045826 103 N---GTVEARSIVEP-----------IRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVI 168 (584)
Q Consensus 103 ~---g~~~~~~i~~~-----------~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVl 168 (584)
. ...+...+... +...++..+ ++++.+.+..+++.. +.+.... + +..+.||+|||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~a~~~~~~~--v~v~~~~-----g--~~~~~~d~lvi 156 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKK--VEYINGLGSFVDSHT--LLAKLKS-----G--ERTITAQTFVI 156 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETTE--EEEECTT-----C--CEEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEccCCE--EEEEeCC-----C--eEEEEcCEEEE
Confidence 0 01111111111 223345555 668889998888664 4443321 1 13799999999
Q ss_pred ccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHh
Q 045826 169 AMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDD 248 (584)
Q Consensus 169 AtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~ 248 (584)
|||+.|..|++||.+++.+ +..+.. .+. ...++++|||+|++|+|+|..+++++
T Consensus 157 ATGs~p~~p~i~G~~~~~~---~~~~~~-------------~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g--- 210 (483)
T 3dgh_A 157 AVGGRPRYPDIPGAVEYGI---TSDDLF-------------SLD-------REPGKTLVVGAGYIGLECAGFLKGLG--- 210 (483)
T ss_dssp CCCEEECCCSSTTHHHHCB---CHHHHT-------------TCS-------SCCCEEEEECCSHHHHHHHHHHHHTT---
T ss_pred eCCCCcCCCCCCCcccccC---cHHHHh-------------hhh-------hcCCcEEEECCCHHHHHHHHHHHHcC---
Confidence 9999999999999865432 222211 111 23459999999999999999999865
Q ss_pred HhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce---EEEEeCCCCeEEEEec
Q 045826 249 LSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KE---ISTKDRATGQISSIPY 323 (584)
Q Consensus 249 ~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~---v~~~~~~~G~~~~i~~ 323 (584)
.+|+++++ +.+++.+++++.+.+.+.|++.||+++++++|++++. ++ +++.+..+|+..++++
T Consensus 211 -----------~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~ 278 (483)
T 3dgh_A 211 -----------YEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVY 278 (483)
T ss_dssp -----------CEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEE
T ss_pred -----------CEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEc
Confidence 79999998 5788999999999999999999999999999999963 32 5555533344456999
Q ss_pred ceEEEccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 324 GMVVWSTGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 324 D~vI~a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|.||+|+|.+ |+...+ ++..++ +. |+|.||+++|| +.|+|||+|||+.
T Consensus 279 D~vi~a~G~~--p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~ 329 (483)
T 3dgh_A 279 DTVLWAIGRK--GLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIY 329 (483)
T ss_dssp SEEEECSCEE--ECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBT
T ss_pred CEEEECcccc--cCcCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccC
Confidence 9999999954 444333 356666 44 99999999998 8999999999984
No 63
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.2e-33 Score=300.02 Aligned_cols=260 Identities=18% Similarity=0.268 Sum_probs=192.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc------------------------c--ccccCcc-
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV------------------------T--NGTVEAR- 109 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~------------------------~--~g~~~~~- 109 (584)
.+||+|||||++|+++|..|++.|++|+|||+ +.+++......+ . ....+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 47999999999999999999999999999999 444442211000 0 0011111
Q ss_pred ----------cccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEe-ecCccCCCCCceEEEeCCEEEEccCCCCC-CC
Q 045826 110 ----------SIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCR-TTEDRTCGGKEEFALDYDILVIAMGAQAN-TF 177 (584)
Q Consensus 110 ----------~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~i~yD~LVlAtGs~~~-~~ 177 (584)
.+...+...+...+ ++++.+++..++. +.+.+. ++ ..+.||+||+|||+.|. .|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~--~~v~~~~~~----------~~~~~d~lviAtG~~p~~~p 149 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAG--AEILDTRAELAGP--NTVKLLASG----------KTVTAERIVIAVGGHPSPHD 149 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEESSS--SEEEETTTT----------EEEEEEEEEECCCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeC--CEEEEecCC----------eEEEeCEEEEecCCCcccCC
Confidence 11222344555566 5678888888764 466662 21 28999999999999999 89
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCC
Q 045826 178 NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLK 257 (584)
Q Consensus 178 ~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~ 257 (584)
.+||.+ ++ .+..+... +. ...++++|||+|++|+|+|..+.+++
T Consensus 150 ~i~G~~-~~---~~~~~~~~-------------~~-------~~~~~v~ViGgG~~g~e~A~~l~~~g------------ 193 (463)
T 4dna_A 150 ALPGHE-LC---ITSNEAFD-------------LP-------ALPESILIAGGGYIAVEFANIFHGLG------------ 193 (463)
T ss_dssp TSTTGG-GC---BCHHHHTT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHTT------------
T ss_pred CCCCcc-cc---ccHHHHhh-------------hh-------cCCCeEEEECCCHHHHHHHHHHHHcC------------
Confidence 999974 22 22222111 11 23569999999999999999998865
Q ss_pred CCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce-EEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 258 EFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KE-ISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 258 ~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+....+|+ +++|.||+|+|.++
T Consensus 194 --~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~---i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 194 --VKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE---IVADQVMLALGRMP 268 (463)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE---EEESEEEECSCEEE
T ss_pred --CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe---EEeCEEEEeeCccc
Confidence 7999999999999999999999999999999999999999999964 33 3443134464 89999999999644
Q ss_pred CchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 335 RPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 335 ~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+ ...+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 269 ~--~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~ 309 (463)
T 4dna_A 269 N--TNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTD 309 (463)
T ss_dssp S--CTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGS
T ss_pred C--CCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCC
Confidence 4 3333 556666 67899999999997 8999999999985
No 64
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=2e-32 Score=298.48 Aligned_cols=267 Identities=17% Similarity=0.177 Sum_probs=192.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC--------CCCCCCcccccc---------------------cc---
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN--------YFAFTPLLPSVT---------------------NG--- 104 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~--------~~~~~p~~~~~~---------------------~g--- 104 (584)
.+||||||||+||+.+|.++++.|.+|+|||+.. .++++.+...+. .|
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4799999999999999999999999999999754 234322111110 01
Q ss_pred ---ccCcccc-----------cHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEcc
Q 045826 105 ---TVEARSI-----------VEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAM 170 (584)
Q Consensus 105 ---~~~~~~i-----------~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAt 170 (584)
..+...+ ...+...+++.+ |+++++....+++..-.|..... ..+...+.+|++||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~--V~~i~G~a~f~~~~~v~V~~~~~------~~~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSK--VKYINGLAKLKDKNTVSYYLKGD------LSKEETVTGKYILIAT 193 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECEEEEEEETTEEEEEEC--------CCCEEEEEEEEEEECC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEeeeEEEcCCCcceEeeccc------CCceEEEeeeeEEecc
Confidence 0011111 112334456666 67889999999876433333221 1123489999999999
Q ss_pred CCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhH
Q 045826 171 GAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDL 249 (584)
Q Consensus 171 Gs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~ 249 (584)
|++|..|+.++.. +..+ +- .+...++.+| ++++|||||++|+|+|..+++++
T Consensus 194 Gs~P~~P~~~~~~~~~~~---ts-------------~~~l~l~~lP-------~~lvIIGgG~IGlE~A~~~~~lG---- 246 (542)
T 4b1b_A 194 GCRPHIPDDVEGAKELSI---TS-------------DDIFSLKKDP-------GKTLVVGASYVALECSGFLNSLG---- 246 (542)
T ss_dssp CEEECCCSSSBTHHHHCB---CH-------------HHHTTCSSCC-------CSEEEECCSHHHHHHHHHHHHHT----
T ss_pred CCCCCCCCcccCCCcccc---Cc-------------hhhhccccCC-------ceEEEECCCHHHHHHHHHHHhcC----
Confidence 9999888544432 3322 11 1222333333 39999999999999999999987
Q ss_pred hhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEE
Q 045826 250 SKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVV 327 (584)
Q Consensus 250 ~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI 327 (584)
++||++++ +++|+.+++++.+.+.+.|++.||++++++.+++++ ++.+.+.. .++.. +.+|.|+
T Consensus 247 ----------~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~-~~~~~--~~~D~vL 312 (542)
T 4b1b_A 247 ----------YDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEF-SDKTS--ELYDTVL 312 (542)
T ss_dssp ----------CCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEE-TTSCE--EEESEEE
T ss_pred ----------CeEEEecc-cccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEE-cCCCe--EEEEEEE
Confidence 79999987 578999999999999999999999999999999985 34555544 33554 7899999
Q ss_pred EccCCCCCchHHHH-HHHhCC--cCCC-ceeeCCCCccCCCCCEEEeCcccc
Q 045826 328 WSTGIGTRPVIMDF-MKQIGQ--ANRR-VLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 328 ~a~G~~~~p~~~~l-~~~~~l--~~~g-~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+|+| +.|+++.| ++.+++ +.++ .|.||+++|| +.|+|||+|||+.
T Consensus 313 vAvG--R~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~ 361 (542)
T 4b1b_A 313 YAIG--RKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAE 361 (542)
T ss_dssp ECSC--EEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBT
T ss_pred Eccc--ccCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccC
Confidence 9999 78888776 566666 4444 4578889998 8999999999984
No 65
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.8e-33 Score=301.53 Aligned_cols=263 Identities=22% Similarity=0.326 Sum_probs=192.6
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc-------------------ccc------cCcccc-
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT-------------------NGT------VEARSI- 111 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~-------------------~g~------~~~~~i- 111 (584)
+||||||||+||+++|..|++.|++|+|||+++.+++......+. .+. .+...+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 689999999999999999999999999999997765532111000 000 111111
Q ss_pred ----------cHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCC
Q 045826 112 ----------VEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPG 181 (584)
Q Consensus 112 ----------~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG 181 (584)
...+...+++.+ ++++.+++..+++ +.+.+.. . + ..+.||+||+|||+.|..|+++|
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~--v~~~~g~~~~i~~--~~~~v~~-~-----g---~~~~~d~lviAtG~~p~~~~~~g 148 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNG--IARHQGTARFLSE--RKVLVEE-T-----G---EELEARYILIATGSAPLIPPWAQ 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEESSS--SEEEETT-T-----C---CEEEEEEEEECCCEEECCCTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CeEEEee-C-----C---EEEEecEEEECCCCCCCCCCCCC
Confidence 111345566666 5567777766654 4555542 1 1 27999999999999999888888
Q ss_pred cccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcE
Q 045826 182 VVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTR 261 (584)
Q Consensus 182 ~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~ 261 (584)
.+.. .+.+..++. .+. ...++++|||||++|+|+|..+.+.+ .+
T Consensus 149 ~~~~--~v~~~~~~~-------------~~~-------~~~~~vvIiGgG~~g~e~A~~l~~~g--------------~~ 192 (455)
T 2yqu_A 149 VDYE--RVVTSTEAL-------------SFP-------EVPKRLIVVGGGVIGLELGVVWHRLG--------------AE 192 (455)
T ss_dssp CCSS--SEECHHHHT-------------CCS-------SCCSEEEEECCSHHHHHHHHHHHHTT--------------CE
T ss_pred CCcC--cEechHHhh-------------ccc-------cCCCeEEEECCCHHHHHHHHHHHHcC--------------CE
Confidence 6531 122332221 111 13469999999999999999998764 79
Q ss_pred EEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHH
Q 045826 262 ITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIM 339 (584)
Q Consensus 262 V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~ 339 (584)
|+++++.++++|.+++.+.+.+.+.+++.||+++++++|++++. +++.+.. .+|++ +++|.||+|+|.+++ ..
T Consensus 193 V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~~D~vv~A~G~~p~--~~ 267 (455)
T 2yqu_A 193 VIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVEL-EGGEV--LEADRVLVAVGRRPY--TE 267 (455)
T ss_dssp EEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSCEEEC--CT
T ss_pred EEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCCeE--EEcCEEEECcCCCcC--CC
Confidence 99999999999999999999999999999999999999999964 3465553 34665 999999999996544 32
Q ss_pred HH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 340 DF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 340 ~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
.+ ++..++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 268 ~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~ 305 (455)
T 2yqu_A 268 GLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVR 305 (455)
T ss_dssp TCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSS
T ss_pred CCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCC
Confidence 22 455666 45688999999998 8999999999985
No 66
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.1e-32 Score=281.67 Aligned_cols=270 Identities=18% Similarity=0.211 Sum_probs=183.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC--ccc------ccc--ccccCcccccHHHHHHHHHcCCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP--LLP------SVT--NGTVEARSIVEPIRNIVRKKGMD 125 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p--~~~------~~~--~g~~~~~~i~~~~~~~~~~~g~~ 125 (584)
.++|||||||||||++||.+|++.|++|+|||++..-+..+ .++ .++ ...+...++...+...+.+.+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~-- 80 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYG-- 80 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT--
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcC--
Confidence 35899999999999999999999999999999875322111 111 111 011222345566677777777
Q ss_pred EEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHH
Q 045826 126 IQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVID 204 (584)
Q Consensus 126 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~ 204 (584)
+.+...++..+....+........+ .++.||+||||||+.|+.|++||.+... ..+........
T Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~------- 145 (314)
T 4a5l_A 81 TTIITETIDHVDFSTQPFKLFTEEG--------KEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDG------- 145 (314)
T ss_dssp CEEECCCEEEEECSSSSEEEEETTC--------CEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHT-------
T ss_pred cEEEEeEEEEeecCCCceEEEECCC--------eEEEEeEEEEcccccccccCCCccccccccceeeehhhhh-------
Confidence 4456666777766655443333221 2899999999999999999999976321 11111111000
Q ss_pred HHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHH
Q 045826 205 CFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284 (584)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~ 284 (584)
.....++++++|||||++|+|+|..+++++ .+|+++++.+..+.. + ....
T Consensus 146 -----------~~~~~~~~~vvViGgG~ig~e~A~~l~~~G--------------~~Vt~v~~~~~~~~~--~---~~~~ 195 (314)
T 4a5l_A 146 -----------AVPIFRNKVLMVVGGGDAAMEEALHLTKYG--------------SKVIILHRRDAFRAS--K---TMQE 195 (314)
T ss_dssp -----------TSGGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCSC--H---HHHH
T ss_pred -----------hhhhcCCCeEEEECCChHHHHHHHHHHHhC--------------Ceeeeeccccccccc--c---hhhh
Confidence 001134679999999999999999998865 799999998776543 2 2233
Q ss_pred HHHHhCCcEEEeCCceeEEcC-----CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCC
Q 045826 285 EKFKRDGIDLKTGSMVVKLSD-----KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWL 359 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v~~-----~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l 359 (584)
+.+...+++.+..+.+.++.. +++.+.+...++..++++|.|++++| ..|++..+...+.++++|.+ ||+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G--~~pn~~~l~~~~~~~~~G~i-v~~~~ 272 (314)
T 4a5l_A 196 RVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIG--HSPNSKFLGGQVKTADDGYI-LTEGP 272 (314)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC--EEESCGGGTTSSCBCTTSCB-CCBTT
T ss_pred hhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecc--cccChhHhcccceEcCCeeE-eCCCC
Confidence 556677899998888888753 23556554445555699999999999 45555433222222566655 89999
Q ss_pred ccCCCCCEEEeCccccc
Q 045826 360 RVEGCESVYALGDCATI 376 (584)
Q Consensus 360 ~~~~~~~VfaiGD~a~~ 376 (584)
|| +.|+|||+|||+..
T Consensus 273 ~T-s~pgIyA~GDv~~~ 288 (314)
T 4a5l_A 273 KT-SVDGVFACGDVCDR 288 (314)
T ss_dssp BC-SSTTEEECSTTTCS
T ss_pred cc-CCCCEEEEEeccCC
Confidence 98 89999999999863
No 67
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-32 Score=284.47 Aligned_cols=266 Identities=18% Similarity=0.237 Sum_probs=183.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc----ccccc--cccCcccccHHHHHHHHHcCCcEEE
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL----PSVTN--GTVEARSIVEPIRNIVRKKGMDIQF 128 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~----~~~~~--g~~~~~~i~~~~~~~~~~~g~~v~~ 128 (584)
+.++||+|||||++|+++|..|++.|++|+|||+.. .++.... ...+. ..+...++...+.+.+.+.++ ++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v--~~ 88 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGA--DL 88 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTC--EE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCC--EE
Confidence 346799999999999999999999999999999752 2221111 01110 012233555667777777774 45
Q ss_pred EEEEEEEEecCC-CEE-EEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHHH
Q 045826 129 KEAECYKIDAEK-KQI-YCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVIDC 205 (584)
Q Consensus 129 ~~~~v~~id~~~-~~v-~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~~ 205 (584)
+.++|..++..+ ..| .+.++ ..+.||+||+|+|+.+..|++||..++. ..+..... .. .
T Consensus 89 ~~~~v~~i~~~~~~~v~~~~~g----------~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~---~~----~- 150 (335)
T 2a87_A 89 RMEDVESVSLHGPLKSVVTADG----------QTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT---CD----G- 150 (335)
T ss_dssp ECCCEEEEECSSSSEEEEETTS----------CEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH---HH----G-
T ss_pred EEeeEEEEEeCCcEEEEEeCCC----------CEEEeCEEEECCCCCccCCCCCchHhccCCceEEeec---cc----h-
Confidence 666789998722 234 33322 1799999999999999988999865421 01111110 00 0
Q ss_pred HHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHH
Q 045826 206 FERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEE 285 (584)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~ 285 (584)
....+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.++.. ..+ ..+
T Consensus 151 ------------~~~~~~~v~ViG~G~~g~e~a~~l~~~g--------------~~V~l~~~~~~~~~~--~~~---~~~ 199 (335)
T 2a87_A 151 ------------FFFRDQDIAVIGGGDSAMEEATFLTRFA--------------RSVTLVHRRDEFRAS--KIM---LDR 199 (335)
T ss_dssp ------------GGGTTCEEEEECSSHHHHHHHHHHTTTC--------------SEEEEECSSSSCSSC--TTH---HHH
T ss_pred ------------hhcCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEcCCcCCcc--HHH---HHH
Confidence 0124569999999999999999998653 799999999877532 111 124
Q ss_pred HHHhCCcEEEeCCceeEEcCCe----EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHH-HhCCcCCCceeeCCCCc
Q 045826 286 KFKRDGIDLKTGSMVVKLSDKE----ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMK-QIGQANRRVLATDEWLR 360 (584)
Q Consensus 286 ~L~~~GV~v~~~~~V~~v~~~~----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~-~~~l~~~g~i~Vd~~l~ 360 (584)
.+++.||+++++++|++++.++ +.+.+..+|+..++++|.||||+|++++. .+++ .+.++.+|+|.||++++
T Consensus 200 ~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~vd~~~~ 276 (335)
T 2a87_A 200 ARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRS---GLVREAIDVDPDGYVLVQGRTT 276 (335)
T ss_dssp HHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECC---TTTBTTBCBCTTSCBCCSTTSS
T ss_pred HhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccCh---hHhhcccccCCCccEEeCCCCC
Confidence 4567899999999999997654 77765334643459999999999976554 2333 23336689999999753
Q ss_pred cCCCCCEEEeCcccc
Q 045826 361 VEGCESVYALGDCAT 375 (584)
Q Consensus 361 ~~~~~~VfaiGD~a~ 375 (584)
.++.|+|||+|||+.
T Consensus 277 ~t~~~~iya~GD~~~ 291 (335)
T 2a87_A 277 STSLPGVFAAGDLVD 291 (335)
T ss_dssp BCSSTTEEECGGGTC
T ss_pred ccCCCCEEEeeecCC
Confidence 348999999999985
No 68
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.8e-32 Score=295.45 Aligned_cols=268 Identities=19% Similarity=0.299 Sum_probs=190.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC------ccccc--------------------c-cc----
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP------LLPSV--------------------T-NG---- 104 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p------~~~~~--------------------~-~g---- 104 (584)
..+||+|||||+||+++|..|++.|++|+|||+++..++.. ....+ . .+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 35899999999999999999999999999999987332221 00000 0 00
Q ss_pred --ccCccc-----------ccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccC
Q 045826 105 --TVEARS-----------IVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMG 171 (584)
Q Consensus 105 --~~~~~~-----------i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtG 171 (584)
..+... +...+..++++.+ ++++.+++..++.....|...++ ....+.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~~~~~~~~v~~~~g--------~~~~~~~d~lvlAtG 151 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANG--VTLFEGHGKLLAGKKVEVTAADG--------SSQVLDTENVILASG 151 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEESEEEECSTTCEEEECTTS--------CEEEECCSCEEECCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCCEEEEEcCCC--------ceEEEEcCEEEEcCC
Confidence 000000 1111234455566 66788888888766544433222 124899999999999
Q ss_pred CCCCCCCCCCccc-ccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHh
Q 045826 172 AQANTFNTPGVVE-HAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLS 250 (584)
Q Consensus 172 s~~~~~~ipG~~~-~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~ 250 (584)
+.|..++.++... +++ +..+. ..+. ...++++|||+|++|+|+|..+.+++
T Consensus 152 ~~p~~~~~~~~~~~~v~---~~~~~-------------~~~~-------~~~~~v~ViGgG~~g~e~A~~l~~~g----- 203 (476)
T 3lad_A 152 SKPVEIPPAPVDQDVIV---DSTGA-------------LDFQ-------NVPGKLGVIGAGVIGLELGSVWARLG----- 203 (476)
T ss_dssp EEECCCTTSCCCSSSEE---EHHHH-------------TSCS-------SCCSEEEEECCSHHHHHHHHHHHHTT-----
T ss_pred CCCCCCCCCCCCcccEE---echhh-------------hccc-------cCCCeEEEECCCHHHHHHHHHHHHcC-----
Confidence 9987665554332 222 11111 1111 23469999999999999999998865
Q ss_pred hhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeE--EEEeCCCCeEEEEecceE
Q 045826 251 KLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEI--STKDRATGQISSIPYGMV 326 (584)
Q Consensus 251 ~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v--~~~~~~~G~~~~i~~D~v 326 (584)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+ .+.+ .+| ..++++|.|
T Consensus 204 ---------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~-~~g-~~~~~~D~v 272 (476)
T 3lad_A 204 ---------AEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVD-AEG-EKSQAFDKL 272 (476)
T ss_dssp ---------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEES-SSE-EEEEEESEE
T ss_pred ---------CcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEe-CCC-cEEEECCEE
Confidence 7999999999999999999999999999999999999999999963 333 3333 123 235999999
Q ss_pred EEccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 327 VWSTGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 327 I~a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|+|+|.+ |+...+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 273 i~a~G~~--p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 321 (476)
T 3lad_A 273 IVAVGRR--PVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVR 321 (476)
T ss_dssp EECSCEE--ECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS
T ss_pred EEeeCCc--ccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCC
Confidence 9999954 444333 455565 56789999999998 8999999999984
No 69
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=9.9e-33 Score=299.45 Aligned_cols=260 Identities=20% Similarity=0.262 Sum_probs=192.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc------------------------c--ccccCcc-
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV------------------------T--NGTVEAR- 109 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~------------------------~--~g~~~~~- 109 (584)
.+||+|||||++|+++|..|++.|++|+|||+ +.+++......+ . ....+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 46999999999999999999999999999999 444443211100 0 0001111
Q ss_pred ----------cccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEe-ecCccCCCCCceEEEeCCEEEEccCCCCC-CC
Q 045826 110 ----------SIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCR-TTEDRTCGGKEEFALDYDILVIAMGAQAN-TF 177 (584)
Q Consensus 110 ----------~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~i~yD~LVlAtGs~~~-~~ 177 (584)
.+...+...+...+ ++++.+++..++. +.+.+. ++ ..+.||+||+|||+.|. .|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~i~~--~~v~v~~~~----------~~~~~d~lviAtG~~p~~~p 170 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSN--VHIYESRAVFVDE--HTLELSVTG----------ERISAEKILIATGAKIVSNS 170 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEETTTC----------CEEEEEEEEECCCEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeC--CEEEEecCC----------eEEEeCEEEEccCCCcccCC
Confidence 11222445556666 6678888888885 466664 22 28999999999999998 88
Q ss_pred CCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCC
Q 045826 178 NTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLK 257 (584)
Q Consensus 178 ~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~ 257 (584)
.+||.. .++...... .+. ...++++|||+|++|+|+|..+.+++
T Consensus 171 ~i~G~~-~~~~~~~~~----------------~~~-------~~~~~v~ViGgG~~g~e~A~~l~~~g------------ 214 (484)
T 3o0h_A 171 AIKGSD-LCLTSNEIF----------------DLE-------KLPKSIVIVGGGYIGVEFANIFHGLG------------ 214 (484)
T ss_dssp -CBTGG-GSBCTTTGG----------------GCS-------SCCSEEEEECCSHHHHHHHHHHHHTT------------
T ss_pred CCCCcc-ccccHHHHH----------------hHH-------hcCCcEEEECcCHHHHHHHHHHHHcC------------
Confidence 999874 222221110 011 23469999999999999999998865
Q ss_pred CCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCCCC
Q 045826 258 EFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 258 ~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 335 (584)
.+|+++++.+++++.+++.+.+.+.+.+++.||+++++++|++++.+ ++.+.. .+|++ +++|.||+|+|.+++
T Consensus 215 --~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 215 --VKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVL-TNGQT--ICADRVMLATGRVPN 289 (484)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEE-TTSCE--EEESEEEECCCEEEC
T ss_pred --CeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEE-CCCcE--EEcCEEEEeeCCCcC
Confidence 79999999999999999999999999999999999999999999643 444443 34764 999999999996444
Q ss_pred chHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 336 PVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 336 p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
...+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 290 --~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 329 (484)
T 3o0h_A 290 --TTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTG 329 (484)
T ss_dssp --CTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGT
T ss_pred --CCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC
Confidence 3322 455666 67799999999997 8999999999985
No 70
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1.3e-32 Score=283.59 Aligned_cols=270 Identities=16% Similarity=0.198 Sum_probs=184.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcC----CCCCCCCCccc----cccc--cccCcccccHHHHHHHHHcCCcE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSP----RNYFAFTPLLP----SVTN--GTVEARSIVEPIRNIVRKKGMDI 126 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~----~~~~~~~p~~~----~~~~--g~~~~~~i~~~~~~~~~~~g~~v 126 (584)
+++|+|||||++|+++|..|++.|++|+|||+ ....++..... ..+. ..+...++...+.+.+.+.++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv-- 85 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT-- 85 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC--
Confidence 57999999999999999999999999999998 33332221110 0000 011223455667777777774
Q ss_pred EEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc--ccccCHHHHHHHHHHHHH
Q 045826 127 QFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA--HFLKEVEHAQRIRRSVID 204 (584)
Q Consensus 127 ~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~--~~~~~~~~a~~~~~~l~~ 204 (584)
+++.++|..++.+.+.+.+.. .+ ..+.||+||+|+|+.+..+++||..+.. +....+.........
T Consensus 86 ~~~~~~v~~i~~~~~~~~v~~-~~--------~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 153 (333)
T 1vdc_A 86 TIFTETVTKVDFSSKPFKLFT-DS--------KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGA--- 153 (333)
T ss_dssp EEECCCCCEEECSSSSEEEEC-SS--------EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTT---
T ss_pred EEEEeEEEEEEEcCCEEEEEE-CC--------cEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccc---
Confidence 456667999998777444432 11 2799999999999999988899875411 111111110000000
Q ss_pred HHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHH
Q 045826 205 CFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284 (584)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~ 284 (584)
+ ....+++|+|||+|++|+|+|..|.+.+ .+|+++++.+.+.. .+.+ ..
T Consensus 154 -~-----------~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~--~~~~---~~ 202 (333)
T 1vdc_A 154 -A-----------PIFRNKPLAVIGGGDSAMEEANFLTKYG--------------SKVYIIHRRDAFRA--SKIM---QQ 202 (333)
T ss_dssp -S-----------GGGTTSEEEEECCSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS--CHHH---HH
T ss_pred -h-----------hhcCCCeEEEECCChHHHHHHHHHHhcC--------------CeEEEEecCCcCCc--cHHH---HH
Confidence 0 0134579999999999999999987653 79999999987643 2222 22
Q ss_pred HHHHhCCcEEEeCCceeEEcCCe-------EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHH-HhCCcCCCceeeC
Q 045826 285 EKFKRDGIDLKTGSMVVKLSDKE-------ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMK-QIGQANRRVLATD 356 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v~~~~-------v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~-~~~l~~~g~i~Vd 356 (584)
+.+++.||+++++++|++++.++ +.+.+..+|+..++++|.||||+|++++. .+++ .+.++.+|+|.||
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~vd 279 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPAT---KFLDGGVELDSDGYVVTK 279 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESC---GGGTTSSCBCTTSCBCCC
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccch---HHhhccccccCCCCEEec
Confidence 44567899999999999996543 66665435654569999999999976554 2333 2223567999999
Q ss_pred CCC-ccCCCCCEEEeCcccc
Q 045826 357 EWL-RVEGCESVYALGDCAT 375 (584)
Q Consensus 357 ~~l-~~~~~~~VfaiGD~a~ 375 (584)
+++ +| +.|+|||+|||+.
T Consensus 280 ~~~~~t-~~~~vya~GD~~~ 298 (333)
T 1vdc_A 280 PGTTQT-SVPGVFAAGDVQD 298 (333)
T ss_dssp TTSCBC-SSTTEEECGGGGC
T ss_pred hhhccc-CCCCEEEeeeccC
Confidence 975 55 8999999999986
No 71
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.3e-32 Score=298.98 Aligned_cols=264 Identities=16% Similarity=0.208 Sum_probs=188.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc------------------------cccc--ccCccc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS------------------------VTNG--TVEARS 110 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~------------------------~~~g--~~~~~~ 110 (584)
.+||+|||||+||+++|..|++.|++|+|||+++ ++++..... +..+ ..+...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 4799999999999999999999999999999975 454321100 0000 111112
Q ss_pred ccHHHHHH-----------HHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCC
Q 045826 111 IVEPIRNI-----------VRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT 179 (584)
Q Consensus 111 i~~~~~~~-----------~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~i 179 (584)
+...+... +.... .+.++.+++..++. ++|.+.++ ..+.||+||||||++|..|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~g~a~~~~~--~~v~~~~~----------~~~~~d~lViATGs~p~~p~~ 153 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFD-EQDKIRGFAKFLDE--HTLQVDDH----------SQVIAKRIVIATGSRPNYPEF 153 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC-GGGEEESCEEEEET--TEEEETTT----------EEEEEEEEEECCCEECCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CeeEEEEEEEEecC--CEEEEcCC----------cEEEeCEEEEccCCCCcCCCC
Confidence 22222211 11111 23356777776664 46766432 289999999999999988876
Q ss_pred CCcc-cccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCC
Q 045826 180 PGVV-EHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKE 258 (584)
Q Consensus 180 pG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~ 258 (584)
++.. ++++ +..+.. .+. ..+++++|||||++|+|+|..+.+++
T Consensus 154 ~~~~~~~v~---t~~~~~-------------~~~-------~~~k~vvViGgG~ig~E~A~~l~~~g------------- 197 (492)
T 3ic9_A 154 LAAAGSRLL---TNDNLF-------------ELN-------DLPKSVAVFGPGVIGLELGQALSRLG------------- 197 (492)
T ss_dssp HHTTGGGEE---CHHHHT-------------TCS-------SCCSEEEEESSCHHHHHHHHHHHHTT-------------
T ss_pred CCccCCcEE---cHHHHh-------------hhh-------hcCCeEEEECCCHHHHHHHHHHHHcC-------------
Confidence 5532 2222 222211 111 23569999999999999999999865
Q ss_pred CcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeC-CCCeEEEEecceEEEccCCCCC
Q 045826 259 FTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDR-ATGQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 259 ~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~-~~G~~~~i~~D~vI~a~G~~~~ 335 (584)
.+|+++++.+++++.+++++.+.+.+.|++. |+++++++|++++. +++.+... .+|+..++++|.||+|+|.++
T Consensus 198 -~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p- 274 (492)
T 3ic9_A 198 -VIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKA- 274 (492)
T ss_dssp -CEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEE-
T ss_pred -CeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCcc-
Confidence 7999999999999999999999999999998 99999999999954 44554432 247444699999999999544
Q ss_pred chHHHH-HHHhCC--cCCCceeeC-CCCccCCCCCEEEeCcccc
Q 045826 336 PVIMDF-MKQIGQ--ANRRVLATD-EWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 336 p~~~~l-~~~~~l--~~~g~i~Vd-~~l~~~~~~~VfaiGD~a~ 375 (584)
+...+ ++.+++ +.+|+|.|| +++|| +.|+|||+|||+.
T Consensus 275 -~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~ 316 (492)
T 3ic9_A 275 -NVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANN 316 (492)
T ss_dssp -SCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGT
T ss_pred -CCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCC
Confidence 44332 566666 678999999 89999 8999999999985
No 72
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.98 E-value=5e-32 Score=301.55 Aligned_cols=270 Identities=16% Similarity=0.227 Sum_probs=189.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC-CC-------CCCCCccccc-------------------------
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR-NY-------FAFTPLLPSV------------------------- 101 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~-~~-------~~~~p~~~~~------------------------- 101 (584)
...+||+|||||+||+++|..|++.|++|+|||+. +. ++++.....+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999999999999999973 21 2221110000
Q ss_pred -ccc--ccCcccccHHH-----------HHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEE
Q 045826 102 -TNG--TVEARSIVEPI-----------RNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILV 167 (584)
Q Consensus 102 -~~g--~~~~~~i~~~~-----------~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LV 167 (584)
... ..+...+...+ ...+...+ ++++.+.+..++.. .+.+.... + +...+.||+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--V~~~~~~~~~~~~~--~v~v~~~~-----g-~~~~~~~d~lv 254 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQ--VTYLNAKGRLISPH--EVQITDKN-----Q-KVSTITGNKII 254 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETT--EEEEECTT-----C-CEEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCC--cEEEEEEEEEcCCC--EEEEEeCC-----C-CeEEEEeCEEE
Confidence 000 01111111111 22244455 66788888888865 45544322 1 12379999999
Q ss_pred EccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHH
Q 045826 168 IAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVID 247 (584)
Q Consensus 168 lAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~ 247 (584)
||||++|+.|++||..++.. +..++ + ..+ ...++++|||||++|+|+|..+++++
T Consensus 255 iAtGs~p~~p~i~G~~~~~~---~~~~~----------~---~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g-- 309 (598)
T 2x8g_A 255 LATGERPKYPEIPGAVEYGI---TSDDL----------F---SLP-------YFPGKTLVIGASYVALECAGFLASLG-- 309 (598)
T ss_dssp ECCCEEECCCSSTTHHHHCE---EHHHH----------T---TCS-------SCCCSEEEECCSHHHHHHHHHHHHTT--
T ss_pred EeCCCCCCCCCCCCcccceE---cHHHH----------h---hCc-------cCCCEEEEECCCHHHHHHHHHHHHcC--
Confidence 99999999999999755432 11111 1 111 23458999999999999999999875
Q ss_pred hHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEc--------C---CeEEEEe-CCC
Q 045826 248 DLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLS--------D---KEISTKD-RAT 315 (584)
Q Consensus 248 ~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--------~---~~v~~~~-~~~ 315 (584)
.+|+++++. .+++.+++.+.+.+.+.|++.||++++++.+++++ . +.+.+.. ..+
T Consensus 310 ------------~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~ 376 (598)
T 2x8g_A 310 ------------GDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD 376 (598)
T ss_dssp ------------CCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETT
T ss_pred ------------CEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCC
Confidence 789999998 78889999999999999999999999998887773 2 3343331 134
Q ss_pred CeEEEEecceEEEccCCCCCchHHHH-HHHhCC--cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 316 GQISSIPYGMVVWSTGIGTRPVIMDF-MKQIGQ--ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 316 G~~~~i~~D~vI~a~G~~~~p~~~~l-~~~~~l--~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|++.++++|.||||+|++ |++..+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 377 g~~~~~~~D~vi~a~G~~--p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~ 436 (598)
T 2x8g_A 377 GKKFEEEFETVIFAVGRE--PQLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINA 436 (598)
T ss_dssp SCEEEEEESEEEECSCEE--ECGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBT
T ss_pred CcEEeccCCEEEEEeCCc--cccCccCchhcCceECCCCcEEeCCCCcC-CCCCEEEEeeecC
Confidence 765456699999999954 544333 455666 56789999999998 8999999999964
No 73
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.98 E-value=5.5e-32 Score=280.71 Aligned_cols=263 Identities=16% Similarity=0.191 Sum_probs=181.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc------------cccccccc---------cCcccccHHH
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL------------LPSVTNGT---------VEARSIVEPI 115 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~------------~~~~~~g~---------~~~~~i~~~~ 115 (584)
+++|+|||||++|+++|..|++.|++|+|||+++.+++... ......+. .....+...+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 57999999999999999999999999999999976543211 00000110 0113455667
Q ss_pred HHHHHHcCCcEEEEEEEEEEEecCCCEEE-EeecCccCCCCCceEEEeCCEEEEccCC--CCCCCCCCCcccccccccCH
Q 045826 116 RNIVRKKGMDIQFKEAECYKIDAEKKQIY-CRTTEDRTCGGKEEFALDYDILVIAMGA--QANTFNTPGVVEHAHFLKEV 192 (584)
Q Consensus 116 ~~~~~~~g~~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LVlAtGs--~~~~~~ipG~~~~~~~~~~~ 192 (584)
.+++++.++++ +...+|+.++.+++.+. +.... ..+.||+||+|+|. .|..|.+||..+........
T Consensus 83 ~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~v~~~~---------g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~ 152 (357)
T 4a9w_A 83 AQYEQKYALPV-LRPIRVQRVSHFGERLRVVARDG---------RQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHS 152 (357)
T ss_dssp HHHHHHTTCCE-ECSCCEEEEEEETTEEEEEETTS---------CEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHcCCEE-EcCCEEEEEEECCCcEEEEEeCC---------CEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEe
Confidence 77778888665 34678999999888766 55432 17999999999995 67778899876421100000
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCC-ccc
Q 045826 193 EHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAG-DHI 271 (584)
Q Consensus 193 ~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~i 271 (584)
. .+ .......+++|+|||+|++|+|+|..|++. .+|+++++. +.+
T Consensus 153 ~----------------~~---~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~---------------~~v~~v~~~~~~~ 198 (357)
T 4a9w_A 153 A----------------HY---STPAPFAGMRVAIIGGGNSGAQILAEVSTV---------------AETTWITQHEPAF 198 (357)
T ss_dssp G----------------GC---CCSGGGTTSEEEEECCSHHHHHHHHHHTTT---------------SEEEEECSSCCCB
T ss_pred c----------------cC---CChhhcCCCEEEEECCCcCHHHHHHHHHhh---------------CCEEEEECCCCee
Confidence 0 00 011123567999999999999999999864 269999988 566
Q ss_pred cccc--cHHHHHHHHHHHH----------------------------hCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEE
Q 045826 272 LNMF--DKRITASAEEKFK----------------------------RDGIDLKTGSMVVKLSDKEISTKDRATGQISSI 321 (584)
Q Consensus 272 l~~~--~~~~~~~~~~~L~----------------------------~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i 321 (584)
+|.. ...+.+.+.+.+. +.|+ +..+..+.+++.+++.+.+ |++ +
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~~---g~~--i 272 (357)
T 4a9w_A 199 LADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQWAD---GTE--R 272 (357)
T ss_dssp CCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEECTT---SCE--E
T ss_pred cchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeEECC---CCE--e
Confidence 6642 3344333333332 4555 6677788889888877654 775 9
Q ss_pred ecceEEEccCCCCCchHHHHHHHhCC-cCCCceeeCCC--CccCCCCCEEEeCcc
Q 045826 322 PYGMVVWSTGIGTRPVIMDFMKQIGQ-ANRRVLATDEW--LRVEGCESVYALGDC 373 (584)
Q Consensus 322 ~~D~vI~a~G~~~~p~~~~l~~~~~l-~~~g~i~Vd~~--l~~~~~~~VfaiGD~ 373 (584)
++|.||||+|++++. .++++.++ +.+|+|.||++ +++ +.|||||+|||
T Consensus 273 ~~D~vi~a~G~~p~~---~~l~~~gl~~~~G~i~vd~~~l~~t-~~~~vya~Gd~ 323 (357)
T 4a9w_A 273 AFDAVIWCTGFRPAL---SHLKGLDLVTPQGQVEVDGSGLRAL-AVPSVWLLGYG 323 (357)
T ss_dssp ECSEEEECCCBCCCC---GGGTTTTCBCTTSCBCBCTTSCBBS-SCTTEEECSSC
T ss_pred cCCEEEECCCcCCCC---cccCcccccCCCCCccccCCcccCC-CCCCeEEeccc
Confidence 999999999976653 35566677 67789999998 565 99999999954
No 74
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.97 E-value=4e-31 Score=288.97 Aligned_cols=265 Identities=21% Similarity=0.320 Sum_probs=189.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc----cccccc-cccCcccccHHHHHHHHHcCCcEEEE
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL----LPSVTN-GTVEARSIVEPIRNIVRKKGMDIQFK 129 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~----~~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~~ 129 (584)
...+||+|||||+||+++|..|++.|++|+|||+. +++... ...... .......+...+...+++.+ ++++
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g--v~v~ 285 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYD--VDVI 285 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSC--EEEE
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcC--CEEE
Confidence 34679999999999999999999999999999974 222211 111111 11122345566777777777 6666
Q ss_pred EE-EEEEEecC-----CCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHH
Q 045826 130 EA-ECYKIDAE-----KKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVI 203 (584)
Q Consensus 130 ~~-~v~~id~~-----~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~ 203 (584)
.+ +|+.++++ ...|.+.++. .+.||+||+|||+.+..+++||..++.. +.+.
T Consensus 286 ~~~~v~~i~~~~~~~~~~~V~~~~g~----------~~~~d~vVlAtG~~~~~~~ipG~~~~~~--~~v~---------- 343 (521)
T 1hyu_A 286 DSQSASKLVPAATEGGLHQIETASGA----------VLKARSIIIATGAKWRNMNVPGEDQYRT--KGVT---------- 343 (521)
T ss_dssp CSCCEEEEECCSSTTSCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTTT--TTEE----------
T ss_pred cCCEEEEEEeccCCCceEEEEECCCC----------EEEcCEEEECCCCCcCCCCCCChhhhcC--ceEE----------
Confidence 66 89999864 2345443332 7999999999999998889999754210 0000
Q ss_pred HHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHH
Q 045826 204 DCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASA 283 (584)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~ 283 (584)
..+.. ......+++|+|||||++|+|+|..|+..+ .+|+++++.+.++.. ..+
T Consensus 344 ------~~~~~-~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g--------------~~Vtlv~~~~~l~~~------~~l 396 (521)
T 1hyu_A 344 ------YCPHC-DGPLFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMKAD------QVL 396 (521)
T ss_dssp ------CCTTC-CGGGGBTSEEEEECCSHHHHHHHHHHHHHB--------------SEEEEECSSSSCCSC------HHH
T ss_pred ------EeecC-chhhcCCCeEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCcccCcC------HHH
Confidence 00000 011245779999999999999999998864 799999999887642 345
Q ss_pred HHHHHh-CCcEEEeCCceeEEcCC-----eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHH-hCCcCCCceeeC
Q 045826 284 EEKFKR-DGIDLKTGSMVVKLSDK-----EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQ-IGQANRRVLATD 356 (584)
Q Consensus 284 ~~~L~~-~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~l~~~g~i~Vd 356 (584)
.+.|++ .||++++++.+++++.+ ++.+.+..+|+..++++|.||+++|..++ . .++.. +.++.+|+|.||
T Consensus 397 ~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn--~-~~l~~~l~~~~~G~I~Vd 473 (521)
T 1hyu_A 397 QDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPN--T-HWLEGALERNRMGEIIID 473 (521)
T ss_dssp HHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEES--C-GGGTTTSCBCTTSCBCCC
T ss_pred HHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCC--c-hHHhhhhccCCCCcEEeC
Confidence 667777 69999999999999754 35666544576557999999999996544 3 23332 334678999999
Q ss_pred CCCccCCCCCEEEeCccccc
Q 045826 357 EWLRVEGCESVYALGDCATI 376 (584)
Q Consensus 357 ~~l~~~~~~~VfaiGD~a~~ 376 (584)
+++|| +.|+|||+|||+..
T Consensus 474 ~~~~t-s~p~VfA~GD~~~~ 492 (521)
T 1hyu_A 474 AKCET-SVKGVFAAGDCTTV 492 (521)
T ss_dssp TTCBC-SSTTEEECSTTBCC
T ss_pred CCCCC-CCCCEEEeecccCC
Confidence 99998 89999999999863
No 75
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.97 E-value=9.3e-32 Score=274.02 Aligned_cols=262 Identities=15% Similarity=0.169 Sum_probs=170.7
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC--ccccccc-cccCcccccHHHHHHHHHcCCcEEEE
Q 045826 53 GEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP--LLPSVTN-GTVEARSIVEPIRNIVRKKGMDIQFK 129 (584)
Q Consensus 53 ~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p--~~~~~~~-g~~~~~~i~~~~~~~~~~~g~~v~~~ 129 (584)
+.|+.+|||||||||||++||.+|++.|++|+|||++.. ++.. ..+.+.. ....+.++.....+.+.+++ .+.+.
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 79 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-RNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYP-SVHYY 79 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-GGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTST-TEEEE
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-CCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcC-CEEEE
Confidence 346678999999999999999999999999999998753 2211 1111111 11222233333344444444 36677
Q ss_pred EEEEEEEecCCC---EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHHH
Q 045826 130 EAECYKIDAEKK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVIDC 205 (584)
Q Consensus 130 ~~~v~~id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~~ 205 (584)
...+..++.... ++.+.++. ++.||+||||||++|+.|++||.++.. ..+...... +
T Consensus 80 ~~~~~~~~~~~~~~~~v~~~~g~----------~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~--------~- 140 (304)
T 4fk1_A 80 EKTVVMITKQSTGLFEIVTKDHT----------KYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYC--------D- 140 (304)
T ss_dssp ECCEEEEEECTTSCEEEEETTCC----------EEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHH--------H-
T ss_pred eeEEEEeeecCCCcEEEEECCCC----------EEEeCEEEEccCCccccccccCccccccceeeecccc--------c-
Confidence 777777654332 34433322 899999999999999999999975421 111111000 0
Q ss_pred HHHhcCCCCCHHHHhccceEEEECCChh-HHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHH
Q 045826 206 FERASLPNLSDEERKKILHFVVVGGGPT-GVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284 (584)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~vvVVGgG~~-gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~ 284 (584)
....++++++|||||.. ++|+|..+..+ ..+|+++++.+.+. +.+.
T Consensus 141 -----------~~~~~~~~~~VIggG~~~~~e~a~~~~~~--------------~~~v~i~~~~~~~~--------~~~~ 187 (304)
T 4fk1_A 141 -----------GWELKDQPLIIISENEDHTLHMTKLVYNW--------------STDLVIATNGNELS--------QTIM 187 (304)
T ss_dssp -----------SGGGTTSCEEEECCSHHHHHHHHHHHTTT--------------CSCEEEECSSCCCC--------HHHH
T ss_pred -----------hhHhcCCceeeecCCCchhhhHHHHHHhC--------------CceEEEEeccccch--------hhhh
Confidence 00124457888888865 56777666554 37899998877553 2345
Q ss_pred HHHHhCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCc
Q 045826 285 EKFKRDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLR 360 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~ 360 (584)
+.|++.|+++++++ ++.+..+ .+......+|++ +++|.+|+++|..++. .+++++++ +.+|+|.||+++|
T Consensus 188 ~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~--i~~~~~vi~~g~~~~~---~~~~~~g~~~~~~G~I~vd~~~~ 261 (304)
T 4fk1_A 188 DELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLR--IERAGGFIVPTFFRPN---QFIEQLGCELQSNGTFVIDDFGR 261 (304)
T ss_dssp HHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCE--ECCCEEEECCEEECSS---CHHHHTTCCCCTTSSSCSSTTCB
T ss_pred hhhhccceeEeeee-EEEeecCCCeeeeeeccccce--eeecceeeeeccccCC---hhhhhcCeEECCCCCEEECcCCc
Confidence 77889999999875 6666543 222222345775 8888888887753332 35667776 6788999999999
Q ss_pred cCCCCCEEEeCcccc
Q 045826 361 VEGCESVYALGDCAT 375 (584)
Q Consensus 361 ~~~~~~VfaiGD~a~ 375 (584)
| +.|+|||+|||+.
T Consensus 262 T-s~p~IyA~GDv~~ 275 (304)
T 4fk1_A 262 T-SEKNIYLAGETTT 275 (304)
T ss_dssp C-SSTTEEECSHHHH
T ss_pred c-CCCCEEEEeccCC
Confidence 9 8999999999985
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=8.2e-31 Score=273.88 Aligned_cols=265 Identities=17% Similarity=0.210 Sum_probs=178.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCCCCCC------------CCccccccccc------------------
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRNYFAF------------TPLLPSVTNGT------------------ 105 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~~~~~------------~p~~~~~~~g~------------------ 105 (584)
.++|+|||||++|+++|..|++.|+ +|+|||+++ .+. .+.......+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4799999999999999999999999 999999986 221 11111000010
Q ss_pred --cCcccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc
Q 045826 106 --VEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV 183 (584)
Q Consensus 106 --~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~ 183 (584)
.....+...+..++++.++++ +...+|+.++++++.+.+.... + .+.||+||+|+|+.+. |.+|+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i-~~~~~v~~i~~~~~~~~v~~~~-----g----~~~~d~vVlAtG~~~~-p~ip~-- 149 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNI-FENTVVTNISADDAYYTIATTT-----E----TYHADYIFVATGDYNF-PKKPF-- 149 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEE-ECSCCEEEEEECSSSEEEEESS-----C----CEEEEEEEECCCSTTS-BCCCS--
T ss_pred cCCCHHHHHHHHHHHHHHcCCeE-EeCCEEEEEEECCCeEEEEeCC-----C----EEEeCEEEECCCCCCc-cCCCC--
Confidence 111223444566677777553 2245789898875433333321 1 6899999999999865 56676
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEE
Q 045826 184 EHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRIT 263 (584)
Q Consensus 184 ~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~ 263 (584)
+..+....+. .....++++|+|||+|++|+|+|..|.+.+ .+|+
T Consensus 150 ~~~~~~~~~~----------------------~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g--------------~~V~ 193 (369)
T 3d1c_A 150 KYGIHYSEIE----------------------DFDNFNKGQYVVIGGNESGFDAAYQLAKNG--------------SDIA 193 (369)
T ss_dssp SSCEEGGGCS----------------------CGGGSCSSEEEEECCSHHHHHHHHHHHHTT--------------CEEE
T ss_pred CceechhhcC----------------------ChhhcCCCEEEEECCCcCHHHHHHHHHhcC--------------CeEE
Confidence 2222111100 001124569999999999999999998864 7999
Q ss_pred EecCCccccc-------cccHHHHHHHHHHHHhCC-cEEEeCCceeEE--cCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 264 LLEAGDHILN-------MFDKRITASAEEKFKRDG-IDLKTGSMVVKL--SDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 264 lv~~~~~il~-------~~~~~~~~~~~~~L~~~G-V~v~~~~~V~~v--~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
++++.+.+++ .+++.+.+.+.+.|++.| |+++++++|+++ +++.+.+.. .+|+. ...+|.||||+|+.
T Consensus 194 lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~-~~g~~-~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 194 LYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISF-DSGQS-VHTPHEPILATGFD 271 (369)
T ss_dssp EECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEE-SSSCC-EEESSCCEECCCBC
T ss_pred EEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEe-cCCeE-eccCCceEEeeccC
Confidence 9999998874 256788889999999997 999999999999 455544433 34764 23469999999965
Q ss_pred CCchHHHHHHHhCC-cCCCceeeCCCCccCCCCCEEEeCccccc
Q 045826 334 TRPVIMDFMKQIGQ-ANRRVLATDEWLRVEGCESVYALGDCATI 376 (584)
Q Consensus 334 ~~p~~~~l~~~~~l-~~~g~i~Vd~~l~~~~~~~VfaiGD~a~~ 376 (584)
++. ..+ .+.++ +.+|++.||++++.+++|+|||+|||+..
T Consensus 272 ~~~--~~~-~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~ 312 (369)
T 3d1c_A 272 ATK--NPI-VQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVEN 312 (369)
T ss_dssp GGG--SHH-HHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCC
T ss_pred Ccc--chh-hhhhccCCCCCEEechhhcccCCCCeEEecccccc
Confidence 543 222 23234 66788999987666699999999999975
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=8.8e-32 Score=288.65 Aligned_cols=275 Identities=15% Similarity=0.160 Sum_probs=183.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
.+.++|+|||||+||+++|..|++.|++|+|||+++.+++. +.+.++... .+.++.....+++.+.+++ +..+...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~-l~~gip~~~-~~~~~~~~~~~~l~~~gv~--~~~~~~v 195 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGL-LVYGIPGFK-LEKSVVERRVKLLADAGVI--YHPNFEV 195 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTH-HHHTSCTTT-SCHHHHHHHHHHHHHTTCE--EETTCCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCe-eeecCCCcc-CCHHHHHHHHHHHHHCCcE--EEeCCEe
Confidence 45689999999999999999999999999999999877653 222232222 2345666677788888844 4333221
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCC-CCCCCCCCcccccccccCHHHHHHHHHHHHH-HHHHhcCC
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQ-ANTFNTPGVVEHAHFLKEVEHAQRIRRSVID-CFERASLP 212 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~-~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~-~~~~~~~~ 212 (584)
. +.+.+.+ ..+.||+||+|||+. ++.+++||.... .+.+..+ +...... .+... .+
T Consensus 196 ~-----~~v~~~~-----------~~~~~d~vvlAtG~~~~~~~~ipG~~~~--gv~~a~~---~l~~~~~~~~~~~-~~ 253 (456)
T 2vdc_G 196 G-----RDASLPE-----------LRRKHVAVLVATGVYKARDIKAPGSGLG--NIVAALD---YLTTSNKVSLGDT-VE 253 (456)
T ss_dssp T-----TTBCHHH-----------HHSSCSEEEECCCCCEECCTTCSCCTTT--TEEEHHH---HHHHHHHHHCTTT-CS
T ss_pred c-----cEEEhhH-----------hHhhCCEEEEecCCCCCCCCCCCCCcCC--CcEEHHH---HHHHhhhhhcccc-cc
Confidence 1 1122211 146799999999996 777889986421 1112222 1111111 01100 00
Q ss_pred CCCH-HHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc-cccccHHHHHHHHHHHHhC
Q 045826 213 NLSD-EERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI-LNMFDKRITASAEEKFKRD 290 (584)
Q Consensus 213 ~~~~-~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i-l~~~~~~~~~~~~~~L~~~ 290 (584)
.... .....+++|+|||||++|+|+|..+.+.+ ..+|+++++.+.+ +|..+.++ +.+++.
T Consensus 254 ~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~G-------------a~~Vtiv~r~~~~~~p~~~~e~-----~~~~~~ 315 (456)
T 2vdc_G 254 AYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQG-------------ATSVKCLYRRDRKNMPGSQREV-----AHAEEE 315 (456)
T ss_dssp SCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCSTTCSSCHHHH-----HHHHHT
T ss_pred cccccccccCCCEEEEECCChhHHHHHHHHHHcC-------------CCEEEEEEeCCccCCCCCHHHH-----HHHHHC
Confidence 0000 01145789999999999999999988764 1369999999876 77665543 567888
Q ss_pred CcEEEeCCceeEEcCCe----EEEEeC------C---------CCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cC
Q 045826 291 GIDLKTGSMVVKLSDKE----ISTKDR------A---------TGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--AN 349 (584)
Q Consensus 291 GV~v~~~~~V~~v~~~~----v~~~~~------~---------~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~ 349 (584)
||++++++.++++.+++ +++... . +|+..++++|+||+|+|+.+++.. .+++.+++ +.
T Consensus 316 Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~-~~l~~~gl~~~~ 394 (456)
T 2vdc_G 316 GVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLP-NAFDEPELKVTR 394 (456)
T ss_dssp TCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHH-HHHHSTTSCBCT
T ss_pred CCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcch-hhcccCCeeECC
Confidence 99999999999886543 233210 0 254457999999999997554321 15566665 67
Q ss_pred CCceeeCCC-CccCCCCCEEEeCcccc
Q 045826 350 RRVLATDEW-LRVEGCESVYALGDCAT 375 (584)
Q Consensus 350 ~g~i~Vd~~-l~~~~~~~VfaiGD~a~ 375 (584)
+|+|.||++ +|| +.|+|||+|||+.
T Consensus 395 ~G~i~vd~~~~~T-s~~~VfA~GD~~~ 420 (456)
T 2vdc_G 395 WGTLLVDHRTKMT-NMDGVFAAGDIVR 420 (456)
T ss_dssp TSSBCCCTTTCBC-SSTTEEECGGGGS
T ss_pred CCCEEECCCCCcC-CCCCEEEeccccC
Confidence 899999997 997 8999999999985
No 78
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=6.5e-31 Score=296.77 Aligned_cols=290 Identities=13% Similarity=0.102 Sum_probs=204.5
Q ss_pred cCccchhhhhhheeccccceeecccCCCcCc-cC-----CCCCCCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 16 DRSLLSKILVIGTVSGGSAVAFSDSRPFQRI-YG-----DSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
-+||.+|..|+.... ......|..+|.... .. ....+...++||||||||+||+++|..|++.|++|+|||++
T Consensus 345 i~~c~~c~~C~~~~~-~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~ 423 (690)
T 3k30_A 345 IRECIGCNICVSGDL-TMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAG 423 (690)
T ss_dssp CCCCCCCCHHHHHHH-TTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred cccccchhhhhhccc-CCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 357777766665432 223346777776553 11 12234456789999999999999999999999999999999
Q ss_pred CCCCCCCccccccccccCcccccHHHHHHHHHc-CCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEE
Q 045826 90 NYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKK-GMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVI 168 (584)
Q Consensus 90 ~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~-g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVl 168 (584)
+.+++.........+..+...+...+...+.+. + +++..++ .+...+. ..+.||+||+
T Consensus 424 ~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g--v~~~~~~---------~v~~~~~----------~~~~~d~lvl 482 (690)
T 3k30_A 424 RDLGGRVTQESALPGLSAWGRVKEYREAVLAELPN--VEIYRES---------PMTGDDI----------VEFGFEHVIT 482 (690)
T ss_dssp SSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTT--EEEESSC---------CCCHHHH----------HHTTCCEEEE
T ss_pred CCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCC--CEEEECC---------eecHHHH----------hhcCCCEEEE
Confidence 988876555555555555666677777777776 5 4443221 1211111 2688999999
Q ss_pred ccCCC--------CCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEEC--CChhHHHHH
Q 045826 169 AMGAQ--------ANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVG--GGPTGVEFA 238 (584)
Q Consensus 169 AtGs~--------~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG--gG~~gvE~A 238 (584)
|||+. +..+.+||.+.. .+.+..+.. .. . ...+++|+||| +|++|+|+|
T Consensus 483 AtG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l----------~~-~--------~~~g~~VvViG~ggG~~g~e~A 541 (690)
T 3k30_A 483 ATGATWRTDGVARFHTTALPIAEGM--QVLGPDDLF----------AG-R--------LPDGKKVVVYDDDHYYLGGVVA 541 (690)
T ss_dssp CCCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHH----------TT-C--------CCSSSEEEEEECSCSSHHHHHH
T ss_pred cCCCccccccccccCCCCCCCCCCC--cEEcHHHHh----------CC-C--------CCCCCEEEEEcCCCCccHHHHH
Confidence 99998 446778887531 122222211 10 0 13456899999 999999999
Q ss_pred HHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccccc-HHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCe
Q 045826 239 AALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFD-KRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQ 317 (584)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~-~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~ 317 (584)
..|.+.+ .+|+++++.+.+++... +.....+.+.|++.||+++++++|++++.+++.+....+|+
T Consensus 542 ~~L~~~g--------------~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~ 607 (690)
T 3k30_A 542 ELLAQKG--------------YEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASI 607 (690)
T ss_dssp HHHHHTT--------------CEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCC
T ss_pred HHHHhCC--------------CeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCe
Confidence 9999865 79999999999887643 56678888999999999999999999999988877543344
Q ss_pred EEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 318 ISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 318 ~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
..++++|.||+|+|++++. .+.+.++. .+. ++ +.|+|||+|||+.
T Consensus 608 ~~~i~aD~VV~A~G~~p~~---~l~~~l~~--~~~-------~t-~~~~VyaiGD~~~ 652 (690)
T 3k30_A 608 ERELECDAVVMVTARLPRE---ELYLDLVA--RRD-------AG-EIASVRGIGDAWA 652 (690)
T ss_dssp EEEEECSEEEEESCEEECC---HHHHHHHH--HHH-------HT-SCSEEEECGGGTS
T ss_pred EEEEECCEEEECCCCCCCh---HHHHHHhh--hhc-------cc-CCCCEEEEeCCCc
Confidence 4469999999999976554 34433322 111 44 8999999999985
No 79
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=1.4e-30 Score=295.28 Aligned_cols=295 Identities=14% Similarity=0.136 Sum_probs=191.9
Q ss_pred cCccchhhhhhhe-eccccceeecccCCCcCc-c-----CCCCCCCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcC
Q 045826 16 DRSLLSKILVIGT-VSGGSAVAFSDSRPFQRI-Y-----GDSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSP 88 (584)
Q Consensus 16 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~ 88 (584)
-|||.+|..|+.. ... .....|..+|.... . .....+...+++|||||||+||+++|..|++.|++|+|||+
T Consensus 342 ~~~ci~Cn~C~~~~~~~-~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~ 420 (729)
T 1o94_A 342 IRVCIGCNVCISRWEIG-GPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT 420 (729)
T ss_dssp CCCCCCCCHHHHHHHHS-SSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cccccccchhccccccc-CCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4677776655533 111 12234666665442 1 11223445678999999999999999999999999999999
Q ss_pred CCCCCCCCccccccccccCcccccHHHHHHHHHc---C-CcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCC
Q 045826 89 RNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKK---G-MDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYD 164 (584)
Q Consensus 89 ~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~---g-~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD 164 (584)
++++++.........+..+.......+...+... . ..+. ++. ++.+.+.+. ..+.||
T Consensus 421 ~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~--------i~~-~~~v~~~~~----------~~~~~d 481 (729)
T 1o94_A 421 AEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQL--------ALG-QKPMTADDV----------LQYGAD 481 (729)
T ss_dssp SSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEE--------ECS-CCCCCHHHH----------HTSCCS
T ss_pred CCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceE--------EEe-CeEEehhhc----------cccCCC
Confidence 9887765433333333322222222333333322 0 0122 222 223332221 168899
Q ss_pred EEEEccCCC--------CCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEEC--CChhH
Q 045826 165 ILVIAMGAQ--------ANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVG--GGPTG 234 (584)
Q Consensus 165 ~LVlAtGs~--------~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG--gG~~g 234 (584)
+||+|||+. |..+++||.+++...+.+..+... . . ...+++|+||| ||++|
T Consensus 482 ~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~----------~-~--------~~~gk~VvVIG~GgG~~g 542 (729)
T 1o94_A 482 KVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD----------G-K--------KKIGKRVVILNADTYFMA 542 (729)
T ss_dssp EEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH----------C-C--------SCCCSEEEEEECCCSSHH
T ss_pred EEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc----------C-C--------CCCCCeEEEEcCCCCchH
Confidence 999999998 456788987632222334333211 0 0 12467999999 99999
Q ss_pred HHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc--ccHHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEe
Q 045826 235 VEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM--FDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKD 312 (584)
Q Consensus 235 vE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~ 312 (584)
+|+|..|++++ .+|+++++.+ +++. ++.. ...+.+.|++.||++++++.|++++.+++.+..
T Consensus 543 ~e~A~~l~~~G--------------~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~ 606 (729)
T 1o94_A 543 PSLAEKLATAG--------------HEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYN 606 (729)
T ss_dssp HHHHHHHHHTT--------------CEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHcC--------------CEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEE
Confidence 99999999865 7999999998 6652 3333 467788899999999999999999988877653
Q ss_pred CC-CC-----------------eEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEEEeCccc
Q 045826 313 RA-TG-----------------QISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCA 374 (584)
Q Consensus 313 ~~-~G-----------------~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~VfaiGD~a 374 (584)
.. ++ ++.++++|.||||+|+.++. .+++.++ ..+|+++|| +.|+|||+|||+
T Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~---~l~~~l~------~~vd~~~~t-~~~~VyAiGD~~ 676 (729)
T 1o94_A 607 IWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC---TLWNELK------ARESEWAEN-DIKGIYLIGDAE 676 (729)
T ss_dssp TTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC---HHHHHHH------HTGGGTGGG-TCCEEEECGGGT
T ss_pred ecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh---HHHHHHh------hhccccccc-CCCCeEEEeCcc
Confidence 21 12 12348999999999965553 3444432 136888998 899999999997
Q ss_pred c
Q 045826 375 T 375 (584)
Q Consensus 375 ~ 375 (584)
.
T Consensus 677 ~ 677 (729)
T 1o94_A 677 A 677 (729)
T ss_dssp S
T ss_pred c
Confidence 4
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=1.5e-30 Score=279.47 Aligned_cols=285 Identities=14% Similarity=0.103 Sum_probs=190.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccc-C------CCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKS-N------SFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQF 128 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~-~------g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~ 128 (584)
.+++|+|||||+||+++|..|++ . +++|+|||+++++++. ..+.+.++.....++...+...+.+.+ ++|
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~-~~~gv~p~~~~~~~~~~~~~~~~~~~~--v~~ 78 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL-VRSGVAPDHPKIKSISKQFEKTAEDPR--FRF 78 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH-HHHTSCTTCTGGGGGHHHHHHHHTSTT--EEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc-cccccCCCCCCHHHHHHHHHHHHhcCC--CEE
Confidence 35799999999999999999988 6 9999999999876543 244554555455567777888887776 666
Q ss_pred EEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCC-CCCCCCCCcccccccccCHHHHHHHHHHHHHHHH
Q 045826 129 KEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQ-ANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFE 207 (584)
Q Consensus 129 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~-~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~ 207 (584)
+.+ +. + ++.|.+.++ .+.||+||+|||+. ++.+++||.+. ..+.+..+... .+....+
T Consensus 79 ~~~-v~-v---~~~v~~~~~-----------~~~~d~lViAtG~~~~~~~~ipG~~~--~gv~~~~~~~~---~~~~~~d 137 (456)
T 1lqt_A 79 FGN-VV-V---GEHVQPGEL-----------SERYDAVIYAVGAQSDRMLNIPGEDL--PGSIAAVDFVG---WYNAHPH 137 (456)
T ss_dssp EES-CC-B---TTTBCHHHH-----------HHHSSEEEECCCCCEECCCCCTTTTS--TTEEEHHHHHH---HHTTCGG
T ss_pred Eee-EE-E---CCEEEECCC-----------eEeCCEEEEeeCCCCCCCCCCCCCCC--CCcEEHHHHHh---hhhcCcc
Confidence 544 21 2 223333221 57899999999997 78889999741 11223333222 1111111
Q ss_pred H-hcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcC-----CC-CC-cEEEEecCCccccccccH--
Q 045826 208 R-ASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPS-----LK-EF-TRITLLEAGDHILNMFDK-- 277 (584)
Q Consensus 208 ~-~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~-----~~-~~-~~V~lv~~~~~il~~~~~-- 277 (584)
. ..+. ...+++|+|||+|++|+|+|..|.+........+++. ++ .+ .+|+++++.+.++..|.+
T Consensus 138 ~~~~~~------~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~e 211 (456)
T 1lqt_A 138 FEQVSP------DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLE 211 (456)
T ss_dssp GTTCCC------CCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHH
T ss_pred cccchh------hcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHH
Confidence 1 1111 1246799999999999999999987542211111110 01 12 499999998876543321
Q ss_pred -----------------H------------------HHHHHHHHHHh------CCcEEEeCCceeEEcCC----eEEEEe
Q 045826 278 -----------------R------------------ITASAEEKFKR------DGIDLKTGSMVVKLSDK----EISTKD 312 (584)
Q Consensus 278 -----------------~------------------~~~~~~~~L~~------~GV~v~~~~~V~~v~~~----~v~~~~ 312 (584)
+ +.+.+.+.+++ +||++++++.++++..+ ++++..
T Consensus 212 lrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~ 291 (456)
T 1lqt_A 212 LRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGR 291 (456)
T ss_dssp HHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEE
T ss_pred HHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEE
Confidence 1 12344455555 79999999999999764 265542
Q ss_pred C-------------CCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 313 R-------------ATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 313 ~-------------~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
. .+|+..+++||+||||+|+++++. ..+.++.+|+|.||+++|+++.|+|||+|||+.
T Consensus 292 ~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l-----~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~ 362 (456)
T 1lqt_A 292 NELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT-----PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKR 362 (456)
T ss_dssp EEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC-----TTSCCBTTTTBCCEETTEETTCSSEEECTHHHH
T ss_pred EEecCCCcccccccCCCceEEEEcCEEEEccccccCCC-----CCCcccCCCCeeECCCCcCCCCCCEEEEeccCC
Confidence 1 135545699999999999887762 234457778899999999668999999999985
No 81
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.96 E-value=4.2e-29 Score=269.44 Aligned_cols=282 Identities=12% Similarity=0.158 Sum_probs=180.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCC-----CeEEEEcCCCCCCCCCccc--cccc--------------------------
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNS-----FEVQVVSPRNYFAFTPLLP--SVTN-------------------------- 103 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g-----~~V~lid~~~~~~~~p~~~--~~~~-------------------------- 103 (584)
++||||||||++|+++|..|++.| ++|+|||+++.++|.+... ....
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~ 109 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHK 109 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhh
Confidence 469999999999999999999888 9999999999888765321 0000
Q ss_pred -c---------cc--CcccccHHHHHHHHHcCCcEEEEEEEEEEEecC---CC----EEEEeecCccCCCCCceEEEeCC
Q 045826 104 -G---------TV--EARSIVEPIRNIVRKKGMDIQFKEAECYKIDAE---KK----QIYCRTTEDRTCGGKEEFALDYD 164 (584)
Q Consensus 104 -g---------~~--~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~---~~----~v~~~~~~~~~~~~~~~~~i~yD 164 (584)
+ .. ...++...++.+.++.++.+. ...+|+.|+++ .+ .|.+.++. .+.+++.||
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~V~~i~~~~~~~~~~~~~V~~~~g~------g~~~~~~~d 182 (463)
T 3s5w_A 110 HDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSR-YGEEVLRIEPMLSAGQVEALRVISRNAD------GEELVRTTR 182 (463)
T ss_dssp TTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEE-ESEEEEEEEEEEETTEEEEEEEEEEETT------SCEEEEEES
T ss_pred cCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEE-eCCEEEEEEEecCCCceEEEEEEEecCC------CceEEEEeC
Confidence 0 00 011222334444555666664 46779998876 44 44444432 123479999
Q ss_pred EEEEccCCCCCCCC-CCCccc--ccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHH
Q 045826 165 ILVIAMGAQANTFN-TPGVVE--HAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAAL 241 (584)
Q Consensus 165 ~LVlAtGs~~~~~~-ipG~~~--~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l 241 (584)
+||+|||+.|..|. ++++.. .++......+ .+ + .+ ......+++|+|||||.+|+|+|..|
T Consensus 183 ~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~------~~----~--~~----~~~~~~~~~vvVvGgG~sg~e~a~~l 246 (463)
T 3s5w_A 183 ALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLE------HM----A--KQ----PCSSGKPMKIAIIGGGQSAAEAFIDL 246 (463)
T ss_dssp EEEECCCCEECCCGGGGGGTTCTTEEEGGGHHH------HH----C--C-----------CEEEEEECCSHHHHHHHHHH
T ss_pred EEEECCCCCCCCcchhhhcCCCCcEEECHHHHh------hH----H--Hh----hhcccCCCeEEEECCCHhHHHHHHHH
Confidence 99999999877664 233322 2222211111 00 0 00 00112467999999999999999999
Q ss_pred HHHHHHhHhhhCcCCCCCcEEEEecCCcccccc--------------------ccHHHHHHHHHHHHh------------
Q 045826 242 HDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM--------------------FDKRITASAEEKFKR------------ 289 (584)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--------------------~~~~~~~~~~~~L~~------------ 289 (584)
.+.. +..+|+++++.+.++|. +++.....+.+.+..
T Consensus 247 ~~~~------------~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (463)
T 3s5w_A 247 NDSY------------PSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIE 314 (463)
T ss_dssp HHHC------------TTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHH
T ss_pred HhcC------------CCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHH
Confidence 9862 23799999999987652 223333333333222
Q ss_pred --------------CCcEEEeCCceeEEcC--Ce--EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCC
Q 045826 290 --------------DGIDLKTGSMVVKLSD--KE--ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRR 351 (584)
Q Consensus 290 --------------~GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g 351 (584)
.||+++++++|++++. ++ +.+.+..+|+..++++|.||||+|+++++.. .++..+.... |
T Consensus 315 ~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~-~~l~~l~~~~-g 392 (463)
T 3s5w_A 315 RIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHR-QLLEPLAEYL-G 392 (463)
T ss_dssp HHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-C-TTTGGGGGGB-C
T ss_pred HHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCcc-chhHHHHHHh-C
Confidence 6999999999999964 33 5555544677667999999999998777323 2333332211 7
Q ss_pred ceeeCCCCccCC----CCCEEEeCcccc
Q 045826 352 VLATDEWLRVEG----CESVYALGDCAT 375 (584)
Q Consensus 352 ~i~Vd~~l~~~~----~~~VfaiGD~a~ 375 (584)
+|.||+++++.. .|+|||+|||..
T Consensus 393 ~i~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 393 DHEIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp --CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred CcccCcccccccCCCCCCeEEEcCCCcc
Confidence 899999999854 356999999975
No 82
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=2.3e-29 Score=270.40 Aligned_cols=285 Identities=15% Similarity=0.139 Sum_probs=180.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCC--CeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNS--FEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g--~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
.+++|||||||+||+++|..|++.| ++|+|||+++.+++. +.+.+.+......++...+.+.+++.+ ++++.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~-~~~g~~p~~~~~~~~~~~~~~~~~~~g--v~~~~~~~ 81 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGL-VRFGVAPDHPEVKNVINTFTQTARSDR--CAFYGNVE 81 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTH-HHHTSCTTCGGGGGHHHHHHHHHTSTT--EEEEBSCC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCce-eecccCCCCccHHHHHHHHHHHHHhCC--cEEEeeeE
Confidence 3579999999999999999999777 999999999876432 233333333334456666777777776 55543321
Q ss_pred EEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCC-CCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhcC
Q 045826 134 YKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQA-NTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERASL 211 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~-~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~~ 211 (584)
+ .+.|.+.+ ..+.||+||+|||+.+ +.+++||.+ +.++ +..+... .+....+...+
T Consensus 82 --v---~~~V~~~~-----------~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~---~~~~~~~---~~~~~~d~~~~ 139 (460)
T 1cjc_A 82 --V---GRDVTVQE-----------LQDAYHAVVLSYGAEDHQALDIPGEELPGVF---SARAFVG---WYNGLPENREL 139 (460)
T ss_dssp --B---TTTBCHHH-----------HHHHSSEEEECCCCCEECCCCCTTTTSTTEE---EHHHHHH---HHTTCGGGTTC
T ss_pred --E---eeEEEecc-----------ceEEcCEEEEecCcCCCCCCCCCCCCCCcEE---EHHHHHH---HhhcCcccccc
Confidence 1 12232221 1578999999999995 778999974 2222 2222211 11100010011
Q ss_pred CCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcC-----C-CCCc-EEEEecCCccc-------------
Q 045826 212 PNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPS-----L-KEFT-RITLLEAGDHI------------- 271 (584)
Q Consensus 212 ~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~-----~-~~~~-~V~lv~~~~~i------------- 271 (584)
. . ...+++|+|||+|++|+|+|..|++...+....+.+. + ..+. +|+++++.+.+
T Consensus 140 ~---~--~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~ 214 (460)
T 1cjc_A 140 A---P--DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMI 214 (460)
T ss_dssp C---C--CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHH
T ss_pred c---c--CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhh
Confidence 0 0 0146799999999999999999984221100000000 0 1234 79999998865
Q ss_pred -cccc-------------------cH---HHHHHHHHHHHh--------------CCcEEEeCCceeEEcCC----e---
Q 045826 272 -LNMF-------------------DK---RITASAEEKFKR--------------DGIDLKTGSMVVKLSDK----E--- 307 (584)
Q Consensus 272 -l~~~-------------------~~---~~~~~~~~~L~~--------------~GV~v~~~~~V~~v~~~----~--- 307 (584)
+|.. +. .+.+.+.+.+++ +||++++++.+++|..+ .
T Consensus 215 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~ 294 (460)
T 1cjc_A 215 QLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAG 294 (460)
T ss_dssp TCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEE
T ss_pred cCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEE
Confidence 2311 11 123344445555 89999999999999643 2
Q ss_pred EEEEeC------------CCCeEEEEecceEEEccCCCCCchHHHHHHHh-CCcCCCceeeCCCCccCCCCCEEEeCccc
Q 045826 308 ISTKDR------------ATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI-GQANRRVLATDEWLRVEGCESVYALGDCA 374 (584)
Q Consensus 308 v~~~~~------------~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~l~~~g~i~Vd~~l~~~~~~~VfaiGD~a 374 (584)
+.+... .+|+..++++|+||+|+|+++++. ..+ .++.+|+|.||+++||.+.|+|||+|||+
T Consensus 295 v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l-----~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~ 369 (460)
T 1cjc_A 295 IRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI-----DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVK 369 (460)
T ss_dssp EEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC-----CTTSCCBTTTTBCCEETTEETTCTTEEECTHHH
T ss_pred EEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC-----CCCcccccCCCeeECCCCcCcCCCCEEEEEeCC
Confidence 444321 025445699999999999887763 234 45667889999999995589999999998
Q ss_pred c
Q 045826 375 T 375 (584)
Q Consensus 375 ~ 375 (584)
.
T Consensus 370 ~ 370 (460)
T 1cjc_A 370 R 370 (460)
T ss_dssp H
T ss_pred c
Confidence 5
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=2.7e-28 Score=262.84 Aligned_cols=252 Identities=12% Similarity=0.148 Sum_probs=175.7
Q ss_pred CeEEEECCcHHHHHHHHhccc---CCCe---EEEEcCCCCCCCCCcccc----------------------cc-------
Q 045826 58 KKVVVLGTGWAGTTFLKILKS---NSFE---VQVVSPRNYFAFTPLLPS----------------------VT------- 102 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~---~g~~---V~lid~~~~~~~~p~~~~----------------------~~------- 102 (584)
++|+|||||+||+++|..|++ .|++ |+|||+++..++...... ..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999998 9999 999999876654322100 00
Q ss_pred ------------ccccCcccccHHHHHHHHHcCCc--EEEEEEEEEEEecCCC----EEEEeecCccCCCCCceEEEeCC
Q 045826 103 ------------NGTVEARSIVEPIRNIVRKKGMD--IQFKEAECYKIDAEKK----QIYCRTTEDRTCGGKEEFALDYD 164 (584)
Q Consensus 103 ------------~g~~~~~~i~~~~~~~~~~~g~~--v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD 164 (584)
........+...+++++++.++. ++ .+.+|+.|+...+ .|.+.+.. +.+..++.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~-~~~~V~~v~~~~~~~~~~V~~~~~~-----~g~~~~~~~d 156 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIR-FNTAVRHVEFNEDSQTFTVTVQDHT-----TDTIYSEEFD 156 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEE-CSEEEEEEEEETTTTEEEEEEEETT-----TTEEEEEEES
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEE-eCCEEEEEEEcCCCCcEEEEEEEcC-----CCceEEEEcC
Confidence 00011123444566777777765 53 4788999987665 66665421 1112478999
Q ss_pred EEEEccC--CCCCCCCCCCcccc---cccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHH
Q 045826 165 ILVIAMG--AQANTFNTPGVVEH---AHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAA 239 (584)
Q Consensus 165 ~LVlAtG--s~~~~~~ipG~~~~---~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~ 239 (584)
+||+||| +.|+.|.+||.+++ .+....+. ......+++|+|||+|++|+|+|.
T Consensus 157 ~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~----------------------~~~~~~~k~VvVVG~G~sg~eiA~ 214 (464)
T 2xve_A 157 YVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFR----------------------DALEFKDKTVLLVGSSYSAEDIGS 214 (464)
T ss_dssp EEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCC----------------------CGGGGTTSEEEEECCSTTHHHHHH
T ss_pred EEEECCCCCCCCccCCCCCcccCCceEEehhhhC----------------------CHhHcCCCEEEEEcCCCCHHHHHH
Confidence 9999999 78999999997642 11111100 011235679999999999999999
Q ss_pred HHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCeEE
Q 045826 240 ALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQIS 319 (584)
Q Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~ 319 (584)
+|++.+ .+|+++++.+.+++..- ..||+++ ..|+++++++|++.+ |++
T Consensus 215 ~l~~~g--------------~~V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~~~V~~~d---G~~- 262 (464)
T 2xve_A 215 QCYKYG--------------AKKLISCYRTAPMGYKW------------PENWDER--PNLVRVDTENAYFAD---GSS- 262 (464)
T ss_dssp HHHHTT--------------CSEEEEECSSCCCCCCC------------CTTEEEC--SCEEEECSSEEEETT---SCE-
T ss_pred HHHHhC--------------CeEEEEEECCCCCCCCC------------CCceEEc--CCeEEEeCCEEEECC---CCE-
Confidence 999875 78999999988776421 2588887 789999988888754 875
Q ss_pred EEecceEEEccCCCCCchHHHHHH-HhCC--cCCCceeeCCC---CccCCCCCEEEeCcccc
Q 045826 320 SIPYGMVVWSTGIGTRPVIMDFMK-QIGQ--ANRRVLATDEW---LRVEGCESVYALGDCAT 375 (584)
Q Consensus 320 ~i~~D~vI~a~G~~~~p~~~~l~~-~~~l--~~~g~i~Vd~~---l~~~~~~~VfaiGD~a~ 375 (584)
+++|.||+|+|++++ . .++. .+++ ++++++ ++.+ +++ +.|+||++|||+.
T Consensus 263 -i~~D~Vi~atG~~p~--~-~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~ 318 (464)
T 2xve_A 263 -EKVDAIILCTGYIHH--F-PFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQ 318 (464)
T ss_dssp -EECSEEEECCCBCCC--C-TTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCC
T ss_pred -EeCCEEEECCCCCCC--C-CCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCccc
Confidence 899999999997655 2 2332 3555 333355 4433 344 8999999999874
No 84
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.1e-28 Score=277.93 Aligned_cols=272 Identities=15% Similarity=0.153 Sum_probs=188.5
Q ss_pred cccCCCcCc-cCCCCCCCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHH
Q 045826 38 SDSRPFQRI-YGDSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIR 116 (584)
Q Consensus 38 ~~~~~~~~~-~~~~~~~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~ 116 (584)
|..+|.... ......+...+++|||||||+||+++|..|++.|++|+|||+++++++.+.+.....+.....++...+.
T Consensus 353 C~~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 432 (671)
T 1ps9_A 353 CLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYR 432 (671)
T ss_dssp CSSCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHH
T ss_pred EEeCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHH
Confidence 666666432 1112233455789999999999999999999999999999999988887655444444433334455566
Q ss_pred HHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEE-eCCEEEEccCCCCCCCCCCCccc-ccccccCHHH
Q 045826 117 NIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFAL-DYDILVIAMGAQANTFNTPGVVE-HAHFLKEVEH 194 (584)
Q Consensus 117 ~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i-~yD~LVlAtGs~~~~~~ipG~~~-~~~~~~~~~~ 194 (584)
..+++.+++ +..++. +. .. .+ .||+||||||+.|+.|++||.++ +++ +..+
T Consensus 433 ~~~~~~gv~--~~~~~~---------v~---~~----------~~~~~d~lviAtG~~p~~~~i~G~~~~~v~---~~~~ 485 (671)
T 1ps9_A 433 RMIEVTGVT--LKLNHT---------VT---AD----------QLQAFDETILASGIVPRTPPIDGIDHPKVL---SYLD 485 (671)
T ss_dssp HHHHHHTCE--EEESCC---------CC---SS----------SSCCSSEEEECCCEEECCCCCBTTTSTTEE---EHHH
T ss_pred HHHHHcCCE--EEeCcE---------ec---HH----------HhhcCCEEEEccCCCcCCCCCCCCCCCcEe---eHHH
Confidence 777777744 333321 10 00 34 89999999999999999999754 222 2211
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHh------Hhh----------------h
Q 045826 195 AQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDD------LSK----------------L 252 (584)
Q Consensus 195 a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~------~~~----------------~ 252 (584)
. +... ...+++|+|||||++|+|+|..|++.+.+. +.+ .
T Consensus 486 ~----------l~~~---------~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~ 546 (671)
T 1ps9_A 486 V----------LRDK---------APVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQ 546 (671)
T ss_dssp H----------HTSC---------CCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTT
T ss_pred H----------hhCC---------CCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccccccccc
Confidence 1 1100 124679999999999999999998765211 000 0
Q ss_pred CcCCC-CCcEEEEecCCccccc-cccHHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEcc
Q 045826 253 YPSLK-EFTRITLLEAGDHILN-MFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWST 330 (584)
Q Consensus 253 ~~~~~-~~~~V~lv~~~~~il~-~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~ 330 (584)
+|... ...+|+++++.+..+. .+++.....+.+.|++.||+++++++|++++++++++. .+|+..++++|.||||+
T Consensus 547 ~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~--~~G~~~~i~~D~Vi~a~ 624 (671)
T 1ps9_A 547 GMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVV--INGETQVLAVDNVVICA 624 (671)
T ss_dssp CCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEE--ETTEEEEECCSEEEECC
T ss_pred ccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEe--cCCeEEEEeCCEEEECC
Confidence 12222 3478999999887664 46777778888999999999999999999998888774 23754569999999999
Q ss_pred CCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 331 GIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 331 G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
|++++. .+++.+ +. ..++||++|||+.
T Consensus 625 G~~p~~---~l~~~l--------------~~-~g~~v~aiGD~~~ 651 (671)
T 1ps9_A 625 GQEPNR---ALAQPL--------------ID-SGKTVHLIGGCDV 651 (671)
T ss_dssp CEEECC---TTHHHH--------------HT-TTCCEEECGGGTC
T ss_pred CccccH---HHHHHH--------------Hh-cCCCEEEECCcCc
Confidence 966553 233322 11 2378999999986
No 85
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=1.5e-28 Score=287.81 Aligned_cols=276 Identities=14% Similarity=0.120 Sum_probs=179.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
+.++|+|||||+||+++|..|++.|+ +|+|||+++++++. +.+.++.... +.++.....+++++.++ ++..++..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~-~~~~ip~~~~-~~~~~~~~~~~~~~~gv--~~~~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEIPQFRL-PYDVVNFEIELMKDLGV--KIICGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH-HHHTSCTTTS-CHHHHHHHHHHHHTTTC--EEEESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc-ccccCCcccC-CHHHHHHHHHHHHHCCc--EEEcccEe
Confidence 46899999999999999999999999 79999999877664 2223322222 22344455667777774 45444332
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCC-CCCCCCC-CCcccccccccCHHHHHHHHHHHHHHHHHhcCC
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA-QANTFNT-PGVVEHAHFLKEVEHAQRIRRSVIDCFERASLP 212 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs-~~~~~~i-pG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~ 212 (584)
. .+.+.+.+. ..+.||+||||||+ .|+.+++ +|+.+. ..+.+..+... .+.+... ....
T Consensus 262 ~----~~~v~~~~~----------~~~~~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~---~~~~~~~-~~~~ 322 (1025)
T 1gte_A 262 S----ENEITLNTL----------KEEGYKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLP---LVAKSSK-AGMC 322 (1025)
T ss_dssp S----TTSBCHHHH----------HHTTCCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHH---HHHHHHC-BTTB
T ss_pred c----cceEEhhhc----------CccCCCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHH---HHHhhcc-cccc
Confidence 1 122333221 15789999999999 4876654 465321 11222222222 1111100 0000
Q ss_pred CCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCc-cccccccHHHHHHHHHHHHhCC
Q 045826 213 NLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGD-HILNMFDKRITASAEEKFKRDG 291 (584)
Q Consensus 213 ~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~-~il~~~~~~~~~~~~~~L~~~G 291 (584)
.........+++|+|||||++|+|+|..+.+++ ..+|+++++.+ .+++.+++++ +.+++.|
T Consensus 323 ~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G-------------~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~G 384 (1025)
T 1gte_A 323 ACHSPLPSIRGAVIVLGAGDTAFDCATSALRCG-------------ARRVFLVFRKGFVNIRAVPEEV-----ELAKEEK 384 (1025)
T ss_dssp SCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCGGGCCSCHHHH-----HHHHHTT
T ss_pred cccccccccCCcEEEECCChHHHHHHHHHHHcC-------------CCEEEEEEecChhhCCCCHHHH-----HHHHHcC
Confidence 000000012459999999999999999998865 14899999998 5677777665 5678899
Q ss_pred cEEEeCCceeEEcC--CeE---EEEe---CCC-------CeEEEEecceEEEccCCCCCchHHHHHHH-hCC--cCCCce
Q 045826 292 IDLKTGSMVVKLSD--KEI---STKD---RAT-------GQISSIPYGMVVWSTGIGTRPVIMDFMKQ-IGQ--ANRRVL 353 (584)
Q Consensus 292 V~v~~~~~V~~v~~--~~v---~~~~---~~~-------G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~l--~~~g~i 353 (584)
|++++++.++++.. +.+ ++.. ..+ |+..++++|.||+|+|+.++ +. .++.+ .++ +.+|+|
T Consensus 385 v~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~-~~-~l~~~~~gl~~~~~G~I 462 (1025)
T 1gte_A 385 CEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLR-DP-KVKEALSPIKFNRWDLP 462 (1025)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECC-CH-HHHHHTTTSCBCTTSSB
T ss_pred CEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCC-ch-hhhhcccCceECCCCCE
Confidence 99999999998853 333 3321 011 33346999999999996432 22 45554 355 668999
Q ss_pred eeCC-CCccCCCCCEEEeCcccc
Q 045826 354 ATDE-WLRVEGCESVYALGDCAT 375 (584)
Q Consensus 354 ~Vd~-~l~~~~~~~VfaiGD~a~ 375 (584)
.||+ ++|| +.|+|||+|||+.
T Consensus 463 ~vd~~~~~T-s~~~VfA~GD~~~ 484 (1025)
T 1gte_A 463 EVDPETMQT-SEPWVFAGGDIVG 484 (1025)
T ss_dssp CCCTTTCBC-SSTTEEECSGGGC
T ss_pred EECCCCCcc-CCCCEEEeCCCCC
Confidence 9997 8998 8999999999985
No 86
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=5.6e-28 Score=264.47 Aligned_cols=268 Identities=15% Similarity=0.176 Sum_probs=181.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcc-cCCCeEEEEcCCCCCCCCCccc---cc----cc-------------------cccCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILK-SNSFEVQVVSPRNYFAFTPLLP---SV----TN-------------------GTVEA 108 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~-~~g~~V~lid~~~~~~~~p~~~---~~----~~-------------------g~~~~ 108 (584)
..+||||||||++|+++|..|+ +.|++|+|||+++..++..... .+ .. .....
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 3579999999999999999999 9999999999987665432111 10 00 00112
Q ss_pred ccccHHHHHHHHHcCC--cEEEEEEEEEEEecCCC----EEEEeecCccCCCCCceEEEeCCEEEEccC--CCCCCCCCC
Q 045826 109 RSIVEPIRNIVRKKGM--DIQFKEAECYKIDAEKK----QIYCRTTEDRTCGGKEEFALDYDILVIAMG--AQANTFNTP 180 (584)
Q Consensus 109 ~~i~~~~~~~~~~~g~--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LVlAtG--s~~~~~~ip 180 (584)
.++...+...+++.++ .++ .+.+|+.++.+.+ .|.+.++. ++.||+||+|+| +.|..|.+|
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~~~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ip 155 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFK-FGTEVTSALYLDDENLWEVTTDHGE----------VYRAKYVVNAVGLLSAINFPNLP 155 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-ESCCEEEEEEETTTTEEEEEETTSC----------EEEEEEEEECCCSCCSBCCCCCT
T ss_pred HHHHHHHHHHHHHcCCcceeE-eccEEEEEEEeCCCCEEEEEEcCCC----------EEEeCEEEECCcccccCCCCCCC
Confidence 2455556777778776 554 4678888887665 44443322 799999999999 689999999
Q ss_pred CcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCc
Q 045826 181 GVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFT 260 (584)
Q Consensus 181 G~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~ 260 (584)
|++++....... ..+ +......+++|+|||+|.+|+|+|.+|++.+ .
T Consensus 156 G~~~f~g~~~~~----------------~~~---~~~~~~~~krV~VIG~G~sgve~a~~l~~~~--------------~ 202 (540)
T 3gwf_A 156 GLDTFEGETIHT----------------AAW---PEGKSLAGRRVGVIGTGSTGQQVITSLAPEV--------------E 202 (540)
T ss_dssp TGGGCCSEEEEG----------------GGC---CSSCCCTTSEEEEECCSHHHHHHHHHHTTTC--------------S
T ss_pred CccccCCCEEEe----------------ecC---CCccccccceEEEECCCchHHHHHHHHHhhC--------------C
Confidence 986421100000 000 0111245679999999999999999998754 7
Q ss_pred EEEEecCCcc-cccccc----HHHHHHHH---------------------------------------------------
Q 045826 261 RITLLEAGDH-ILNMFD----KRITASAE--------------------------------------------------- 284 (584)
Q Consensus 261 ~V~lv~~~~~-il~~~~----~~~~~~~~--------------------------------------------------- 284 (584)
+|+++++.+. ++|.++ +...+.+.
T Consensus 203 ~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~ 282 (540)
T 3gwf_A 203 HLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFM 282 (540)
T ss_dssp EEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHH
T ss_pred EEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhh
Confidence 9999999998 454332 22211111
Q ss_pred ----------------------H---------------------------------HHHhCCcEEEe--CCceeEEcCCe
Q 045826 285 ----------------------E---------------------------------KFKRDGIDLKT--GSMVVKLSDKE 307 (584)
Q Consensus 285 ----------------------~---------------------------------~L~~~GV~v~~--~~~V~~v~~~~ 307 (584)
+ .|.+.+|+++. +..|++|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g 362 (540)
T 3gwf_A 283 FGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG 362 (540)
T ss_dssp HTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE
T ss_pred hhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe
Confidence 0 01145899986 78999999999
Q ss_pred EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeC----------CCCccCCCCCEEEe-Ccccc
Q 045826 308 ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATD----------EWLRVEGCESVYAL-GDCAT 375 (584)
Q Consensus 308 v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd----------~~l~~~~~~~Vfai-GD~a~ 375 (584)
|++.+ |+. +++|+||+|||+.+.. .++..+++..++.+.++ ..+.++++||+|.+ |..+.
T Consensus 363 v~~~d---G~~--~~~DvIV~ATGf~~~~---~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~ 433 (540)
T 3gwf_A 363 VVTED---GVL--HELDVLVFATGFDAVD---GNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP 433 (540)
T ss_dssp EEETT---CCE--EECSEEEECCCBSCSS---HHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB
T ss_pred EEcCC---CCE--EECCEEEECCccCccc---cCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC
Confidence 98765 876 9999999999986653 23334444333333333 34677899999999 87653
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=1.7e-27 Score=277.06 Aligned_cols=268 Identities=14% Similarity=0.140 Sum_probs=181.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccc--cccccccCcccccHHHHHHHHHc-CCcEEEE-EEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLP--SVTNGTVEARSIVEPIRNIVRKK-GMDIQFK-EAE 132 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~--~~~~g~~~~~~i~~~~~~~~~~~-g~~v~~~-~~~ 132 (584)
.+||||||||+||+++|..|++.|++|+|||+++++++..... ....+. ...+....+.+.+.+. + ++++ ..+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~--v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEE--TTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTT--EEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCC--cEEEeCCE
Confidence 4689999999999999999999999999999998877654410 011111 1112233333444454 5 5454 457
Q ss_pred EEEEecCCCEEEEeecCc-cCCC------CCceEEEeCCEEEEccCCCCCCCCCCCccc-ccccccCHHHHHHHHHHHHH
Q 045826 133 CYKIDAEKKQIYCRTTED-RTCG------GKEEFALDYDILVIAMGAQANTFNTPGVVE-HAHFLKEVEHAQRIRRSVID 204 (584)
Q Consensus 133 v~~id~~~~~v~~~~~~~-~~~~------~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~-~~~~~~~~~~a~~~~~~l~~ 204 (584)
|..++.++....+..... .... ......+.||+||||||+.|+.+++||.+. .++ +..+... .
T Consensus 205 V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~---~~~~~~~---~--- 275 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIM---LAGAVRS---Y--- 275 (965)
T ss_dssp EEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEE---EHHHHHH---H---
T ss_pred EEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEE---EhHHHHH---H---
Confidence 888887665433322110 0000 111237999999999999999889998753 222 2222111 1
Q ss_pred HHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHH
Q 045826 205 CFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAE 284 (584)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~ 284 (584)
+.... ...+++++|||+|++|+|+|..|.+++ .+|+++++.+.+++. .
T Consensus 276 -l~~~~--------~~~gk~vvViGgG~~g~E~A~~L~~~G--------------~~Vtvv~~~~~~~~~---------~ 323 (965)
T 2gag_A 276 -LNRYG--------VRAGARIAVATTNDSAYELVRELAATG--------------GVVAVIDARSSISAA---------A 323 (965)
T ss_dssp -HHTTC--------EESCSSEEEEESSTTHHHHHHHHGGGT--------------CCSEEEESCSSCCHH---------H
T ss_pred -HHhcC--------CCCCCeEEEEcCCHHHHHHHHHHHHcC--------------CcEEEEECCCccchh---------H
Confidence 11100 123569999999999999999998865 679999999887642 5
Q ss_pred HHHHhCCcEEEeCCceeEEcC--C----eEEEEe--CC--CCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCcee
Q 045826 285 EKFKRDGIDLKTGSMVVKLSD--K----EISTKD--RA--TGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLA 354 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v~~--~----~v~~~~--~~--~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~ 354 (584)
+.+++.||+|++++.|++++. + ++++.+ .. +|+..++++|.||+++|.+++ + .++... ++.|.
T Consensus 324 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~--~-~l~~~~----~g~i~ 396 (965)
T 2gag_A 324 AQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPV--V-HLHSQR----QGKLD 396 (965)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEEC--C-HHHHHT----TCCEE
T ss_pred HHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcC--h-HHHHhC----CCcEE
Confidence 678899999999999999975 3 455653 11 254346999999999996544 4 344433 46799
Q ss_pred eCCCCcc----CCCCCEEEeCcccc
Q 045826 355 TDEWLRV----EGCESVYALGDCAT 375 (584)
Q Consensus 355 Vd~~l~~----~~~~~VfaiGD~a~ 375 (584)
||++++. ++.|+|||+|||+.
T Consensus 397 vd~~~~~~v~~ts~p~IyAaGD~a~ 421 (965)
T 2gag_A 397 WDTTIHAFVPADAVANQHLAGAMTG 421 (965)
T ss_dssp EETTTTEEEECSCCTTEEECGGGGT
T ss_pred EcCcccccccCCCCCCEEEEEecCC
Confidence 9998872 48999999999986
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.94 E-value=3.8e-27 Score=253.02 Aligned_cols=258 Identities=16% Similarity=0.120 Sum_probs=166.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCCCCCCCCcccccc----------------------------ccc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRNYFAFTPLLPSVT----------------------------NGT 105 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~~~~~~p~~~~~~----------------------------~g~ 105 (584)
..++|+|||||++|+++|..|++.|. +|+|||+++..++........ ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35799999999999999999999999 999999987654332211100 000
Q ss_pred ---------------------------cCcccccHHHHHHHHHcCCcEEEEEEEEEEEecCCC--EEEEeecCccCCCCC
Q 045826 106 ---------------------------VEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKK--QIYCRTTEDRTCGGK 156 (584)
Q Consensus 106 ---------------------------~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~ 156 (584)
.....+...+.++.+..+..+++ +.+|+.|+...+ .|.+.+.. ++.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~-~t~V~~v~~~~~~~~V~~~~~~----~G~ 159 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKL-ATDVLDIEKKDGSWVVTYKGTK----AGS 159 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEEC-SEEEEEEEEETTEEEEEEEESS----TTC
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEe-CCEEEEEEeCCCeEEEEEeecC----CCC
Confidence 00012233345555555545644 788999988766 44444311 010
Q ss_pred ceEEEeCCEEEEccCC--CCCCCCCCCcccc-------cccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEE
Q 045826 157 EEFALDYDILVIAMGA--QANTFNTPGVVEH-------AHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVV 227 (584)
Q Consensus 157 ~~~~i~yD~LVlAtGs--~~~~~~ipG~~~~-------~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvV 227 (584)
...++.||+||+|+|+ .|+.|.+||++++ ++....+ .......+++|+|
T Consensus 160 ~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~----------------------~~~~~~~~k~VvV 217 (447)
T 2gv8_A 160 PISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLF----------------------REPELFVGESVLV 217 (447)
T ss_dssp CEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGC----------------------CCGGGGTTCCEEE
T ss_pred eeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEeccc----------------------CChhhcCCCEEEE
Confidence 0236899999999999 7888889987532 1111110 0111235679999
Q ss_pred ECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcE-EEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEc--
Q 045826 228 VGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTR-ITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLS-- 304 (584)
Q Consensus 228 VGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~-- 304 (584)
||+|++|+|+|.+|++.+ .+ |+++++.+.+ +++.||.+ +..|++++
T Consensus 218 vG~G~sg~e~A~~l~~~~--------------~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~~ 266 (447)
T 2gv8_A 218 VGGASSANDLVRHLTPVA--------------KHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDPT 266 (447)
T ss_dssp ECSSHHHHHHHHHHTTTS--------------CSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEETT
T ss_pred EccCcCHHHHHHHHHHHh--------------CCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEecC
Confidence 999999999999998764 56 9999998765 44567774 56899994
Q ss_pred CCeEEEEeCCCCeEEEEecceEEEccCCCCC-chHHH-HHHHh--CCcCCCceeeCCCCcc--CCCCCEEEeCcccc
Q 045826 305 DKEISTKDRATGQISSIPYGMVVWSTGIGTR-PVIMD-FMKQI--GQANRRVLATDEWLRV--EGCESVYALGDCAT 375 (584)
Q Consensus 305 ~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~-p~~~~-l~~~~--~l~~~g~i~Vd~~l~~--~~~~~VfaiGD~a~ 375 (584)
+++|++.+ |+. ++++|.||+|+|+.++ +++.. .++.+ ++..++.+.++.+.++ ++.|+||++|||..
T Consensus 267 ~~~v~~~d---G~~-~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~ 339 (447)
T 2gv8_A 267 TREIYLKG---GKV-LSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALH 339 (447)
T ss_dssp TTEEEETT---TEE-ECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBS
T ss_pred CCEEEECC---CCE-eccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEecccc
Confidence 45677654 763 4799999999997665 32000 02222 2222344445544442 47899999999974
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=7.1e-27 Score=256.01 Aligned_cols=178 Identities=10% Similarity=0.086 Sum_probs=117.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc--------------------------ccccCcc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT--------------------------NGTVEAR 109 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~--------------------------~g~~~~~ 109 (584)
..+||||||||+||+++|..|++.|++|+|||+++.++++.....++ .......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 45799999999999999999999999999999998765432111100 1111223
Q ss_pred cccHHHHHHHHHcCC--cEEEEEEEEEEEecCCC----EEEEeecCccCCCCCceEEEeCCEEEEccC--CCCCCCCCCC
Q 045826 110 SIVEPIRNIVRKKGM--DIQFKEAECYKIDAEKK----QIYCRTTEDRTCGGKEEFALDYDILVIAMG--AQANTFNTPG 181 (584)
Q Consensus 110 ~i~~~~~~~~~~~g~--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LVlAtG--s~~~~~~ipG 181 (584)
++...++...++.++ .++ .+.+|+.++.+.+ .|.+.++ .++.||+||+|+| +.|+.|++||
T Consensus 88 ei~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~G----------~~~~ad~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYR-FNTRVTAARYVENDRLWEVTLDNE----------EVVTCRFLISATGPLSASRMPDIKG 156 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEE-CSCCEEEEEEEGGGTEEEEEETTT----------EEEEEEEEEECCCSCBC---CCCTT
T ss_pred HHHHHHHHHHHHcCCcCcEE-ECCEEEEEEEeCCCCEEEEEECCC----------CEEEeCEEEECcCCCCCCcCCCCCC
Confidence 455667777777775 454 3677888876554 4444332 2799999999999 7899999999
Q ss_pred ccccccc-ccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCc
Q 045826 182 VVEHAHF-LKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFT 260 (584)
Q Consensus 182 ~~~~~~~-~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~ 260 (584)
++++... +.+.. . ....+..+......+++|+|||+|++|+|+|.+|++.+ .
T Consensus 157 ~~~f~g~~~h~~~-----------~--~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~--------------~ 209 (545)
T 3uox_A 157 IDSFKGESFHSSR-----------W--PTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETA--------------K 209 (545)
T ss_dssp GGGCCSEEEEGGG-----------C--CBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTB--------------S
T ss_pred ccccCCCeEEccc-----------c--cccccccccccccCCCeEEEECCCccHHHHHHHHHhhC--------------C
Confidence 8652110 00000 0 00000000001246789999999999999999998754 7
Q ss_pred EEEEecCCccc
Q 045826 261 RITLLEAGDHI 271 (584)
Q Consensus 261 ~V~lv~~~~~i 271 (584)
+|+++++.+.+
T Consensus 210 ~Vtv~~r~~~~ 220 (545)
T 3uox_A 210 ELYVFQRTPNW 220 (545)
T ss_dssp EEEEEESSCCC
T ss_pred EEEEEEcCCCc
Confidence 99999999873
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=3.5e-26 Score=250.79 Aligned_cols=175 Identities=15% Similarity=0.215 Sum_probs=122.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccc---cc-----------------------cccccCcc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLP---SV-----------------------TNGTVEAR 109 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~---~~-----------------------~~g~~~~~ 109 (584)
..++|||||||++|+++|..|++.|++|+|||+++.++++.... .+ ........
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 45799999999999999999999999999999987655322110 00 00011223
Q ss_pred cccHHHHHHHHHcCC--cEEEEEEEEEEEecCCC----EEEEeecCccCCCCCceEEEeCCEEEEccC--CCCCCCCCCC
Q 045826 110 SIVEPIRNIVRKKGM--DIQFKEAECYKIDAEKK----QIYCRTTEDRTCGGKEEFALDYDILVIAMG--AQANTFNTPG 181 (584)
Q Consensus 110 ~i~~~~~~~~~~~g~--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LVlAtG--s~~~~~~ipG 181 (584)
++...++..+++.++ .++ .+.+|+.++.+.+ .|.+.++. ++.||+||+|+| +.|..|.+||
T Consensus 100 ei~~yl~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~w~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ipG 168 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIR-FDTRVTSAVLDEEGLRWTVRTDRGD----------EVSARFLVVAAGPLSNANTPAFDG 168 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEE-CSCCEEEEEEETTTTEEEEEETTCC----------EEEEEEEEECCCSEEECCCCCCTT
T ss_pred HHHHHHHHHHHHcCCCccEE-ECCEEEEEEEcCCCCEEEEEECCCC----------EEEeCEEEECcCCCCCCCCCCCCC
Confidence 455667777888876 554 3678888877665 45443332 799999999999 7899999999
Q ss_pred ccccccc-ccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCc
Q 045826 182 VVEHAHF-LKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFT 260 (584)
Q Consensus 182 ~~~~~~~-~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~ 260 (584)
++++... +.+. .+.. ......+++|+|||+|++|+|+|.+|++.+ .
T Consensus 169 ~~~f~g~~~~~~-----------------~~~~--~~~~~~~krV~VIG~G~sgve~a~~l~~~~--------------~ 215 (549)
T 4ap3_A 169 LDRFTGDIVHTA-----------------RWPH--DGVDFTGKRVGVIGTGSSGIQSIPIIAEQA--------------E 215 (549)
T ss_dssp GGGCCSEEEEGG-----------------GCCT--TCCCCBTCEEEEECCSHHHHHHHHHHHHHB--------------S
T ss_pred cccCCCceEEec-----------------cccc--cccccCCCEEEEECCCchHHHHHHHHHhhC--------------C
Confidence 8653110 1000 0000 011135779999999999999999999865 7
Q ss_pred EEEEecCCccc-ccc
Q 045826 261 RITLLEAGDHI-LNM 274 (584)
Q Consensus 261 ~V~lv~~~~~i-l~~ 274 (584)
+|+++++.+.+ +|.
T Consensus 216 ~Vtv~~r~~~~ilp~ 230 (549)
T 4ap3_A 216 QLFVFQRSANYSIPA 230 (549)
T ss_dssp EEEEEESSCCCEEEC
T ss_pred EEEEEECCCCccccC
Confidence 99999999874 443
No 91
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=5.9e-26 Score=246.46 Aligned_cols=238 Identities=16% Similarity=0.167 Sum_probs=160.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc-cccccc-CcccccHHHHHHHHHcCCcEEE-EEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS-VTNGTV-EARSIVEPIRNIVRKKGMDIQF-KEAEC 133 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~-~~~g~~-~~~~i~~~~~~~~~~~g~~v~~-~~~~v 133 (584)
.+||||||||++|+++|..|++. ++|+|||+++++++...... ...+.. ...++...+.+.+ ..+ +++ ...+|
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~--v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NEN--TKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTT--EEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcC--CEEEcCCEE
Confidence 35899999999999999999988 99999999988776533211 111110 1112222222222 334 443 46788
Q ss_pred EEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCC
Q 045826 134 YKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPN 213 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~ 213 (584)
..++.+++.+.+.... ..+...+.||+||+|||+.+..+++||.+.. .+.+..++..+.+ ...
T Consensus 184 ~~i~~~~~~~~~~~~~-----~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~--gv~~~~~~~~~~~-------~~~--- 246 (493)
T 1y56_A 184 LGVFDKGEYFLVPVVR-----GDKLIEILAKRVVLATGAIDSTMLFENNDMP--GVFRRDFALEVMN-------VWE--- 246 (493)
T ss_dssp CCCEECSSSEEEEEEE-----TTEEEEEEESCEEECCCEEECCCCCTTTTST--TEEEHHHHHHHHH-------TSC---
T ss_pred EEEEcCCcEEEEEEec-----CCeEEEEECCEEEECCCCCccCCCCCCCCCC--CEEEcHHHHHHHH-------hcc---
Confidence 8888877755443211 1112379999999999999998889987522 1223333322211 100
Q ss_pred CCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcE
Q 045826 214 LSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGID 293 (584)
Q Consensus 214 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~ 293 (584)
...+++++|||+|++|+| +.+++.||+
T Consensus 247 -----~~~~~~vvViGgG~~gle------------------------------------------------~~l~~~GV~ 273 (493)
T 1y56_A 247 -----VAPGRKVAVTGSKADEVI------------------------------------------------QELERWGID 273 (493)
T ss_dssp -----BCSCSEEEEESTTHHHHH------------------------------------------------HHHHHHTCE
T ss_pred -----cCCCCEEEEECCCHHHHH------------------------------------------------HHHHhCCcE
Confidence 124569999999999987 345677999
Q ss_pred EEeCCceeEEcCCe-EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC----cCCCcee-eCCCCccCCCCCE
Q 045826 294 LKTGSMVVKLSDKE-ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ----ANRRVLA-TDEWLRVEGCESV 367 (584)
Q Consensus 294 v~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l----~~~g~i~-Vd~~l~~~~~~~V 367 (584)
|++++.|++++.++ +......+|++ +++|.||+|+|++++. .+++.+++ +.+|+|. ||++++ +.|+|
T Consensus 274 v~~~~~v~~i~~~~~v~~v~~~~g~~--i~aD~Vv~a~G~~p~~---~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~v 346 (493)
T 1y56_A 274 YVHIPNVKRVEGNEKVERVIDMNNHE--YKVDALIFADGRRPDI---NPITQAGGKLRFRRGYYSPVLDEYHR--IKDGI 346 (493)
T ss_dssp EEECSSEEEEECSSSCCEEEETTCCE--EECSEEEECCCEEECC---HHHHHTTCCEEEETTEEEECCCTTSE--EETTE
T ss_pred EEeCCeeEEEecCCceEEEEeCCCeE--EEeCEEEECCCcCcCc---hHHHhcCCCccccCCceeeccccccC--cCCCE
Confidence 99999999997643 22111234665 9999999999965553 46666665 3578887 899999 78999
Q ss_pred EEeCcccc
Q 045826 368 YALGDCAT 375 (584)
Q Consensus 368 faiGD~a~ 375 (584)
||+|||+.
T Consensus 347 ya~GD~~~ 354 (493)
T 1y56_A 347 YVAGSAVS 354 (493)
T ss_dssp EECSTTTC
T ss_pred EEEeccCC
Confidence 99999985
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.92 E-value=1.2e-24 Score=239.03 Aligned_cols=174 Identities=17% Similarity=0.223 Sum_probs=113.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc---ccc-----------cc------------ccccCcc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL---LPS-----------VT------------NGTVEAR 109 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~---~~~-----------~~------------~g~~~~~ 109 (584)
..++|||||||++|+++|..|++.|++|+|||+++.+++... .+. .. .......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 357999999999999999999999999999999876653211 000 00 0001112
Q ss_pred cccHHHHHHHHHcC--CcEEEEEEEEEEEecCC--CEEEEeecCccCCCCCceEEEeCCEEEEccC--CCCCCCCCCCcc
Q 045826 110 SIVEPIRNIVRKKG--MDIQFKEAECYKIDAEK--KQIYCRTTEDRTCGGKEEFALDYDILVIAMG--AQANTFNTPGVV 183 (584)
Q Consensus 110 ~i~~~~~~~~~~~g--~~v~~~~~~v~~id~~~--~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtG--s~~~~~~ipG~~ 183 (584)
++...+..+.++.+ ..+++ +.+|+.++.+. +.+.+....+ .++.||+||+|+| +.|..|.+||++
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~-~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~vV~AtG~~s~p~~p~i~G~~ 165 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITF-HTTVTAAAFDEATNTWTVDTNHG--------DRIRARYLIMASGQLSVPQLPNFPGLK 165 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEEC-SCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSCCCCCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCCceEEc-CcEEEEEEEcCCCCeEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 23344555556655 24543 66788887643 2344433221 1789999999999 468888899975
Q ss_pred ccccc-ccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEE
Q 045826 184 EHAHF-LKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRI 262 (584)
Q Consensus 184 ~~~~~-~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V 262 (584)
.+... +.+. .++. ......+++|+|||+|.+|+|+|..++..+ .+|
T Consensus 166 ~f~G~~~hs~-----------------~~~~--~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~--------------~~v 212 (542)
T 1w4x_A 166 DFAGNLYHTG-----------------NWPH--EPVDFSGQRVGVIGTGSSGIQVSPQIAKQA--------------AEL 212 (542)
T ss_dssp GCCSEEEEGG-----------------GCCS--SCCCCBTCEEEEECCSHHHHHHHHHHHHHB--------------SEE
T ss_pred cCCCceEECC-----------------CCCC--chhccCCCEEEEECCCccHHHHHHHHhhcC--------------ceE
Confidence 42110 1000 0000 001135789999999999999999999864 689
Q ss_pred EEecCCccc
Q 045826 263 TLLEAGDHI 271 (584)
Q Consensus 263 ~lv~~~~~i 271 (584)
+++.+.+.+
T Consensus 213 tv~~r~~~~ 221 (542)
T 1w4x_A 213 FVFQRTPHF 221 (542)
T ss_dssp EEEESSCCC
T ss_pred EEEEcCCcc
Confidence 999888765
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.84 E-value=6.7e-20 Score=171.32 Aligned_cols=126 Identities=23% Similarity=0.346 Sum_probs=104.2
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc---------ccc-----cHHHHHHHHHHHHh
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL---------NMF-----DKRITASAEEKFKR 289 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------~~~-----~~~~~~~~~~~L~~ 289 (584)
+|+|||||++|+|+|..|++.+ .+|+++++.+.++ +.+ ++++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAG--------------LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999864 7999999988766 233 57889999999999
Q ss_pred CCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC--cCCCceeeCCCCccCCCC
Q 045826 290 DGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ--ANRRVLATDEWLRVEGCE 365 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l--~~~g~i~Vd~~l~~~~~~ 365 (584)
.||+++++ +|++++. +++.+.. ++| + +++|.||+|+|.. |. +.+.+++ + +|.|.||+++|| +.|
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~-~~g-~--i~ad~vI~A~G~~--~~---~~~~~g~~~~-~g~i~vd~~~~t-~~~ 136 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVET-EEG-V--EKAERLLLCTHKD--PT---LPSLLGLTRR-GAYIDTDEGGRT-SYP 136 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEEC-SSC-E--EEEEEEEECCTTC--CH---HHHHHTCCEE-TTEECCCTTCBC-SST
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEE-CCC-E--EEECEEEECCCCC--CC---ccccCCCCcc-CceEEeCCCCCc-CCC
Confidence 99999999 9999964 4455543 346 3 9999999999954 43 3445555 5 889999999999 899
Q ss_pred CEEEeCcccc
Q 045826 366 SVYALGDCAT 375 (584)
Q Consensus 366 ~VfaiGD~a~ 375 (584)
+|||+|||+.
T Consensus 137 ~i~a~GD~~~ 146 (180)
T 2ywl_A 137 RVYAAGVARG 146 (180)
T ss_dssp TEEECGGGGT
T ss_pred CEEEeecccC
Confidence 9999999986
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.81 E-value=1.9e-18 Score=187.59 Aligned_cols=283 Identities=12% Similarity=0.118 Sum_probs=168.1
Q ss_pred CCCCCeEEEECCcHHHHHHHHhccc--------------CCCeEEEEcCCCCCCCCCc--cccccccc------------
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKS--------------NSFEVQVVSPRNYFAFTPL--LPSVTNGT------------ 105 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~--------------~g~~V~lid~~~~~~~~p~--~~~~~~g~------------ 105 (584)
....+||||||+||+||++|..|.+ .+...+.+|+.+.|.|.+. ++......
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCC
Confidence 3456899999999999999998863 2346789999998888652 22211000
Q ss_pred --------------------------cCcccccHHHHHHHHHcCCcEEEEEEEEEEEecCC----------CEEEEeecC
Q 045826 106 --------------------------VEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEK----------KQIYCRTTE 149 (584)
Q Consensus 106 --------------------------~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~----------~~v~~~~~~ 149 (584)
....++..+++.+.++.+..++| ..+|+.|.+.. -+|++.++.
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf-~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAY-GEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEE-SEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEc-ceEEEeeccccccccccccceEEEEEecCC
Confidence 01123445566666666656765 66788875432 245555543
Q ss_pred ccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEEC
Q 045826 150 DRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVG 229 (584)
Q Consensus 150 ~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG 229 (584)
......+.++.||+|||..|..|+.++....++......+ ..... .....++|+|+|||
T Consensus 195 -----~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~------~~~~~----------~~~~~~gKrV~VVG 253 (501)
T 4b63_A 195 -----TGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCT------TLPAL----------LKDKSKPYNIAVLG 253 (501)
T ss_dssp -----TCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHH------HHHHH----------SCCTTSCCEEEEEC
T ss_pred -----CceEEEEEeCEEEECcCCCCCCCCCCCCCcceeecccccc------chhhc----------cccccCCcEEEEEC
Confidence 2224588999999999998887766554443332222211 11110 01124678999999
Q ss_pred CChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc---------ccHHH-----------HH--------
Q 045826 230 GGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM---------FDKRI-----------TA-------- 281 (584)
Q Consensus 230 gG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~---------~~~~~-----------~~-------- 281 (584)
+|.+|+|++.+|++.. ...+|+++.|.+.+.|. +.+.. ..
T Consensus 254 ~G~SA~ei~~~L~~~~------------~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~ 321 (501)
T 4b63_A 254 SGQSAAEIFHDLQKRY------------PNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKA 321 (501)
T ss_dssp CSHHHHHHHHHHHHHS------------TTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGG
T ss_pred CcHHHHHHHHHHHhcC------------CCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999999998642 24789999998765431 11111 11
Q ss_pred ------------HHHHHHH----------hCCcEEEeCCceeEEcCC----eEEEE--e---------CCCCeEEEEecc
Q 045826 282 ------------SAEEKFK----------RDGIDLKTGSMVVKLSDK----EISTK--D---------RATGQISSIPYG 324 (584)
Q Consensus 282 ------------~~~~~L~----------~~GV~v~~~~~V~~v~~~----~v~~~--~---------~~~G~~~~i~~D 324 (584)
.+.+.+- .....+..+..+..++.. .+.+. . ..+|++ +++|
T Consensus 322 ~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~--~~~D 399 (501)
T 4b63_A 322 TNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKET--LEVD 399 (501)
T ss_dssp GTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCE--EEES
T ss_pred hhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeE--EECC
Confidence 1111110 012345555555555321 12111 0 123665 9999
Q ss_pred eEEEccCCCCCchHHHHHH---HhCCcCCCceeeCCCCccC-------CCCCEEEeCcc
Q 045826 325 MVVWSTGIGTRPVIMDFMK---QIGQANRRVLATDEWLRVE-------GCESVYALGDC 373 (584)
Q Consensus 325 ~vI~a~G~~~~p~~~~l~~---~~~l~~~g~i~Vd~~l~~~-------~~~~VfaiGD~ 373 (584)
.||+|||+++.... .|+. .+..+.+|.+.|+.+++.. ..++||+.|=|
T Consensus 400 ~VI~ATGy~~~~p~-~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 400 ALMVATGYNRNAHE-RLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp EEEECCCEECCTHH-HHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred EEEECcCCCCCCcc-hhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 99999998765422 3322 2233667888898877652 23569999943
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.51 E-value=1.7e-13 Score=133.21 Aligned_cols=94 Identities=20% Similarity=0.114 Sum_probs=70.3
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc-----------------ccccc-------cHHH
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH-----------------ILNMF-------DKRI 279 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-----------------il~~~-------~~~~ 279 (584)
.|+|||||++|+++|..|++.+ .+|+++++... ++..+ ...+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g--------------~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKG--------------VRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 7999999999999999999864 79999998731 11111 2366
Q ss_pred HHHHHHHHHhC-CcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 280 TASAEEKFKRD-GIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 280 ~~~~~~~L~~~-GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+.+.+.+++. ||+++ +++|+++. ++.+......+|++ +++|.||+|+|...
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~--i~a~~VV~A~G~~s 125 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP--ARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC--EECSEEEECCTTCS
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE--EECCEEEECCCCCh
Confidence 77888889887 99999 46899885 34443222345764 99999999999743
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.47 E-value=1.9e-14 Score=154.88 Aligned_cols=257 Identities=15% Similarity=0.177 Sum_probs=142.4
Q ss_pred eEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc----------c-----------------------------
Q 045826 59 KVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL----------P----------------------------- 99 (584)
Q Consensus 59 ~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~----------~----------------------------- 99 (584)
||||||||+||+++|..|++.|.+|+|||+. .......+ +
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 6999999999999999999999999999998 32221100 0
Q ss_pred ------------ccc--------ccccCc----------ccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEE---EEe
Q 045826 100 ------------SVT--------NGTVEA----------RSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQI---YCR 146 (584)
Q Consensus 100 ------------~~~--------~g~~~~----------~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v---~~~ 146 (584)
.+. .+...+ ..+...+.+.+++.++++ +....| .+..+++.+ .+.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i-~~~~~v-~l~~~~~~v~Gv~v~ 157 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI-IEDRLV-EIRVKDGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE-ECCCEE-EEEEETTEEEEEEET
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE-EECcEE-EEEEeCCEEEEEEEE
Confidence 000 000000 112233445556667555 335568 887666654 222
Q ss_pred ecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcccccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEE
Q 045826 147 TTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFV 226 (584)
Q Consensus 147 ~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vv 226 (584)
+.. .++.+|.+|+|||..+..+.++.-.. ...-..+. ..++. .+.+.. .+..+...+++
T Consensus 158 ~~~---------g~~~a~~VVlAtGg~~~~~~~~~~~~-~~tGdgi~--~a~~a-------Ga~~~d--~e~~q~~p~~~ 216 (472)
T 2e5v_A 158 KRG---------LVEDVDKLVLATGGYSYLYEYSSTQS-TNIGDGMA--IAFKA-------GTILAD--MEFVQFHPTVT 216 (472)
T ss_dssp TTE---------EECCCSEEEECCCCCGGGSSSBSSCT-TCSCHHHH--HHHHT-------TCCEEC--TTCEEEEEEEE
T ss_pred eCC---------CeEEeeeEEECCCCCcccCccccCCC-CCchHHHH--HHHHc-------CCCEeC--CcceEEEeEEE
Confidence 111 15779999999999876554321110 00000010 00000 000000 00001111445
Q ss_pred EECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHH--------HHHHHHHHHhCCcEEEeCC
Q 045826 227 VVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRI--------TASAEEKFKRDGIDLKTGS 298 (584)
Q Consensus 227 VVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~--------~~~~~~~L~~~GV~v~~~~ 298 (584)
++|+| +++++..+...+ ..+ +.+.++++++.+++.. ...+.+.+++.|. ++++.
T Consensus 217 ~~ggg--~~~~ae~~~~~G--------------~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~ 278 (472)
T 2e5v_A 217 SLDGE--VFLLTETLRGEG--------------AQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDL 278 (472)
T ss_dssp CGGGC--CEECCTHHHHTT--------------CEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEEC
T ss_pred ccCCC--ceeeehhhcCCc--------------eEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEec
Confidence 56766 777777666543 455 8889999997665543 5666777776663 33322
Q ss_pred ceeEEcCCeEEEEeCCCCeEEEEe-cceEEEccCCCCCchHHHHHHH--hCCcCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 299 MVVKLSDKEISTKDRATGQISSIP-YGMVVWSTGIGTRPVIMDFMKQ--IGQANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 299 ~V~~v~~~~v~~~~~~~G~~~~i~-~D~vI~a~G~~~~p~~~~l~~~--~~l~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
.. +.. + .+. ++ .+.++++.|+.+. .++.- ......|.|.||+++|| +.|+|||+|||+.
T Consensus 279 ~~--~~~----~-----~~~--~~~~~~~~~~~G~dp~----~~i~v~p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 279 SK--IED----F-----ERK--FPVVAKYLARHGHNYK----VKIPIFPAAHFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp TT--CTT----H-----HHH--CHHHHHHHHHTTCCTT----SCEECEEEEEEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred cc--hHH----H-----HHH--hHHHHHHHHHhCcCcc----cceEeehhhceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 10 110 1 111 44 4677778885433 11110 11234688999999999 8999999999986
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1e-15 Score=156.88 Aligned_cols=226 Identities=10% Similarity=0.029 Sum_probs=125.1
Q ss_pred CCeEEEECCcHHHHHHHHhcc--cCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILK--SNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~--~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
.+||+|||||||||+||++|+ +.|++|+|||++++.++....... .++...+......++++.++++.. .
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~---~~~~~~l~~~~~~~~~e~Gv~~~~--~--- 136 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ---LFSAMVMRKPAHLFLQELEIPYED--E--- 136 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST---TCCCEEEETTTHHHHHHTTCCCEE--C---
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc---cCCHHHHHHHHHHHHHHcCCEEEE--C---
Confidence 469999999999999999996 579999999999988876543221 222223444566777788854321 1
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCccccc-ccccCHHHHHHHHHHHHHHHHHhcCCC
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHA-HFLKEVEHAQRIRRSVIDCFERASLPN 213 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~~~~-~~~~~~~~a~~~~~~l~~~~~~~~~~~ 213 (584)
... ....+..+++++..+..+.+||..... ..... +...
T Consensus 137 -----~~~-----------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------------~~~~----- 176 (326)
T 3fpz_A 137 -----GDY-----------------VVVKHAALFISTVLSKVLQLPNVKLFNATCVED-------------LVTR----- 176 (326)
T ss_dssp -----SSE-----------------EEESCHHHHHHHHHHHHHTSTTEEEETTEEEEE-------------EEEE-----
T ss_pred -----Ccc-----------------eecceeEEEEcchhhhccccccceeecccccce-------------eecc-----
Confidence 111 233344445555555555666643210 00000 0000
Q ss_pred CCHHHHhccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcE
Q 045826 214 LSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGID 293 (584)
Q Consensus 214 ~~~~~~~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~ 293 (584)
.......++++|||+|.++++.|..+.... .+++++.+......... +.....
T Consensus 177 --~~~~~~~~~v~viggg~~av~~a~~~~~~~--------------~~v~i~~~~~~~~~~~~----------~~~~~~- 229 (326)
T 3fpz_A 177 --PPTEKGEVTVAGVVTNWTLVTQAHGTQCAM--------------DPNVIELAGYKNDGTRD----------LSQKHG- 229 (326)
T ss_dssp --SSCSSSSCEEEEEEEEEHHHHTCTTSSSCC--------------CCEEEEESCBCTTSSBC----------TTSCCC-
T ss_pred --CCcccCCCEEEEEccCceeeehhhhhhhcc--------------CcEEEEeeccccccccc----------ceeecc-
Confidence 001134569999999999999987665433 57777766654322110 000000
Q ss_pred EEeCCceeEEcCC-eEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCCCCccCCCCCEEEeCc
Q 045826 294 LKTGSMVVKLSDK-EISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGD 372 (584)
Q Consensus 294 v~~~~~V~~v~~~-~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~~l~~~~~~~VfaiGD 372 (584)
.+.....+ ...... +....+.+|.++.+.|.++... .+. .+.|.++..++| +.|+|||+||
T Consensus 230 -----~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~--~~~-------e~~iv~~~~~~t-~vpGv~aaGD 291 (326)
T 3fpz_A 230 -----VILSTTGHDGPFGAF---CAKRIVDIDQNQKLGGMKGLDM--NHA-------EHDVVIHSGAYA-GVDNMYFAGM 291 (326)
T ss_dssp -----EEEECCCSCSSSCSH---HHHHHHHHCTTCCCCCCCCBCH--HHH-------HHHHHHHCEECT-TSBTEEECTH
T ss_pred -----eEEEEecceeeEeec---ceeEEEecCceeeecceecccc--ccc-------CCeEEECCCeEE-CCCCEEEEch
Confidence 11111111 000000 1111256677777777544321 121 134667777787 8999999999
Q ss_pred ccc
Q 045826 373 CAT 375 (584)
Q Consensus 373 ~a~ 375 (584)
++.
T Consensus 292 aa~ 294 (326)
T 3fpz_A 292 EVA 294 (326)
T ss_dssp HHH
T ss_pred Hhc
Confidence 985
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.29 E-value=4e-12 Score=133.85 Aligned_cols=109 Identities=20% Similarity=0.221 Sum_probs=71.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC--------CCcccc--cc------------------------
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF--------TPLLPS--VT------------------------ 102 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~--------~p~~~~--~~------------------------ 102 (584)
.+||+|||||++|+++|..|++.|.+|+|||+++..+. ...+.. ..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 47999999999999999999999999999999875421 000000 00
Q ss_pred ---------------cccc----CcccccHHHHHHHHHcCCcEEEEEEEEEEEecC----CCEEEEeecCccCCCCCceE
Q 045826 103 ---------------NGTV----EARSIVEPIRNIVRKKGMDIQFKEAECYKIDAE----KKQIYCRTTEDRTCGGKEEF 159 (584)
Q Consensus 103 ---------------~g~~----~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~ 159 (584)
.+.+ ....+...+.+.+++.++++ +...+|+.+..+ ...+.+.... .
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i-~~~~~v~~i~~~~~g~~~~~~v~~~~---------g 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI-LLRSEVSQVERIQNDEKVRFVLQVNS---------T 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEE-ECSCCEEEEEECCSCSSCCEEEEETT---------E
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEE-EeCCEEEEEEcccCcCCCeEEEEECC---------C
Confidence 0000 12233344666677778655 335678888755 3445554322 1
Q ss_pred EEeCCEEEEccCCCCC
Q 045826 160 ALDYDILVIAMGAQAN 175 (584)
Q Consensus 160 ~i~yD~LVlAtGs~~~ 175 (584)
.+.+|+||+|+|+.+.
T Consensus 154 ~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 154 QWQCKNLIVATGGLSM 169 (401)
T ss_dssp EEEESEEEECCCCSSC
T ss_pred EEECCEEEECCCCccC
Confidence 6999999999999873
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.03 E-value=1.6e-09 Score=114.79 Aligned_cols=92 Identities=10% Similarity=0.044 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccC--------CCCCchHHHHHHHhCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTG--------IGTRPVIMDFMKQIGQ 347 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G--------~~~~p~~~~l~~~~~l 347 (584)
.+...+.+.+++.| +|+++++|++|+. +++.+.. .+|++ +.+|.||+|+| +.++ +.....+.++.
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vi~a~~~~~l~~i~~~p~-l~~~~~~~~~~ 279 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTV-KDGHA--FQAHSVIVATPMNTWRRIVFTPA-LPERRRSVIEE 279 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEE-TTSCC--EEEEEEEECSCGGGGGGSEEESC-CCHHHHHHHHH
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEE-CCCCE--EEeCEEEEecCcchHhheeeCCC-CCHHHHHHHHh
Confidence 34455556666778 9999999999953 4566654 44664 99999999999 4322 11111222322
Q ss_pred -cCCCceeeCCCCccCCCCCEEEeCcccc
Q 045826 348 -ANRRVLATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 348 -~~~g~i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
.....+.|+..+++ ..++||+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECC-CCcCceEcCCCCE
Confidence 23345889988888 5799999999854
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.98 E-value=9.6e-10 Score=101.92 Aligned_cols=106 Identities=14% Similarity=0.182 Sum_probs=74.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC-cc---ccccccccCcccccHHHHHHHHHcCCcEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP-LL---PSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAE 132 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p-~~---~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~ 132 (584)
+++|+|||||++|+++|..|++.|.+|+|||+++...... .+ +..+ ......++...+.+.+++.++++ +..+
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~gv~v--~~~~ 77 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLL-DEPSGEELLRRLEAHARRYGAEV--RPGV 77 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCT-TCCCHHHHHHHHHHHHHHTTCEE--EECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCc-CCCCHHHHHHHHHHHHHHcCCEE--EeCE
Confidence 3689999999999999999999999999999987433211 00 1110 11223456667788888888554 4448
Q ss_pred EEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCC
Q 045826 133 CYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQA 174 (584)
Q Consensus 133 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~ 174 (584)
|+.++.+++.+.+.... + ++.+|+||+|+|..|
T Consensus 78 v~~i~~~~~~~~v~~~~-----g----~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 78 VKGVRDMGGVFEVETEE-----G----VEKAERLLLCTHKDP 110 (180)
T ss_dssp CCEEEECSSSEEEECSS-----C----EEEEEEEEECCTTCC
T ss_pred EEEEEEcCCEEEEEECC-----C----EEEECEEEECCCCCC
Confidence 88998765544443321 1 789999999999876
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.96 E-value=2.1e-09 Score=107.50 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=88.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-----------------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM----------------------------- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~----------------------------- 274 (584)
.|+|||||++|+.+|..|++. ++.+|+++++.+.+...
T Consensus 41 dVvIIGgG~aGl~aA~~la~~-------------~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~ 107 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKN-------------PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYD 107 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTS-------------TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCE
T ss_pred CEEEECccHHHHHHHHHHHHc-------------CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcc
Confidence 799999999999999999874 13799999988754210
Q ss_pred ---------ccHHHHHHHHHHHHh-CCcEEEeCCceeEEc--CCe---EEEEeC----C--C---CeEEEEecceEEEcc
Q 045826 275 ---------FDKRITASAEEKFKR-DGIDLKTGSMVVKLS--DKE---ISTKDR----A--T---GQISSIPYGMVVWST 330 (584)
Q Consensus 275 ---------~~~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~~~---v~~~~~----~--~---G~~~~i~~D~vI~a~ 330 (584)
....+...+.+.+.+ .||+++++++|+++. ++. +.+... . + |+..++++|.||.|+
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~At 187 (284)
T 1rp0_A 108 EQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSC 187 (284)
T ss_dssp ECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECC
T ss_pred cCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECC
Confidence 123455556666665 699999999999985 343 333310 0 1 233459999999999
Q ss_pred CCCCC--chHHHHHHHhC----CcCCCceeeCC-------CCccCCCCCEEEeCcccc
Q 045826 331 GIGTR--PVIMDFMKQIG----QANRRVLATDE-------WLRVEGCESVYALGDCAT 375 (584)
Q Consensus 331 G~~~~--p~~~~l~~~~~----l~~~g~i~Vd~-------~l~~~~~~~VfaiGD~a~ 375 (584)
|..+. ++...+...++ +.....+.++. +.++ ..|++|++||++.
T Consensus 188 G~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 188 GHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp CSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred CCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 95332 22223333322 22222233331 2233 5699999999864
No 102
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.94 E-value=9.3e-10 Score=106.67 Aligned_cols=117 Identities=17% Similarity=0.222 Sum_probs=76.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc---cccc----------CcccccHHHHHHHHHc-
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT---NGTV----------EARSIVEPIRNIVRKK- 122 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~---~g~~----------~~~~i~~~~~~~~~~~- 122 (584)
.+||+|||||++|+++|..|++.|.+|+|||++....+.+..+... .+.+ +...+...+.+.+++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~ 82 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLR 82 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999973222211111100 0000 1113334455666665
Q ss_pred CCcEEEEEEEEEEEecCCCEE-EEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCCCCcc
Q 045826 123 GMDIQFKEAECYKIDAEKKQI-YCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVV 183 (584)
Q Consensus 123 g~~v~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~~ 183 (584)
+ +++++.+|+++..++..+ .+....+ .++.+|+||+|+|........+|..
T Consensus 83 g--v~i~~~~v~~i~~~~~~v~~v~~~~g--------~~i~a~~VV~A~G~~s~~~~~~G~~ 134 (232)
T 2cul_A 83 P--LHLFQATATGLLLEGNRVVGVRTWEG--------PPARGEKVVLAVGSFLGARLFLGGV 134 (232)
T ss_dssp T--EEEEECCEEEEEEETTEEEEEEETTS--------CCEECSEEEECCTTCSSCEEEETTE
T ss_pred C--cEEEEeEEEEEEEeCCEEEEEEECCC--------CEEECCEEEECCCCChhhceecCCc
Confidence 6 566678999998766653 2322211 1799999999999976655555654
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.83 E-value=3.9e-09 Score=115.81 Aligned_cols=117 Identities=13% Similarity=0.172 Sum_probs=75.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC-CCCCCCccccc--------------cccc----------------
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN-YFAFTPLLPSV--------------TNGT---------------- 105 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~-~~~~~p~~~~~--------------~~g~---------------- 105 (584)
.+||||||||+||++||..|++.|.+|+|||+++ .++..+..+.. ..+.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 5799999999999999999999999999999874 22221111000 0000
Q ss_pred -------------cCcccccHHHHHHHHH-cCCcEEEEEEEEEEEecCCCEE-EEeecCccCCCCCceEEEeCCEEEEcc
Q 045826 106 -------------VEARSIVEPIRNIVRK-KGMDIQFKEAECYKIDAEKKQI-YCRTTEDRTCGGKEEFALDYDILVIAM 170 (584)
Q Consensus 106 -------------~~~~~i~~~~~~~~~~-~g~~v~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~i~yD~LVlAt 170 (584)
.+...+...+.+.+.+ .+ +++++++|+.+..+++.| .+.... + ..+.+|.||+|+
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~G--V~I~~~~V~~L~~e~g~V~GV~t~d-----G---~~I~Ad~VVLAT 177 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPN--LMIFQQAVEDLIVENDRVVGAVTQM-----G---LKFRAKAVVLTV 177 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTT--EEEEECCEEEEEESSSBEEEEEETT-----S---EEEEEEEEEECC
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCC--CEEEEEEEEEEEecCCEEEEEEECC-----C---CEEECCEEEEcC
Confidence 0001123334555655 45 666789999997665543 232211 1 279999999999
Q ss_pred CCCCCCCCCCCcc
Q 045826 171 GAQANTFNTPGVV 183 (584)
Q Consensus 171 Gs~~~~~~ipG~~ 183 (584)
|+.+..+.++|..
T Consensus 178 Gt~s~~~~i~G~~ 190 (651)
T 3ces_A 178 GTFLDGKIHIGLD 190 (651)
T ss_dssp STTTCCEEECC--
T ss_pred CCCccCccccCcc
Confidence 9988777777753
No 104
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.83 E-value=7.7e-09 Score=111.84 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEE--cCCeEEEEeCCCCeEEEEecceEEEccC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKL--SDKEISTKDRATGQISSIPYGMVVWSTG 331 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v--~~~~v~~~~~~~G~~~~i~~D~vI~a~G 331 (584)
..+.+.+.+.+++.|++|+++++|++| ++++++...+.+|++ +.+|.||.+++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~--~~ad~VV~~a~ 275 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRR--FLTQAVASNAD 275 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSCEEECCC
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcE--EEcCEEEECCC
Confidence 567788889999999999999999998 456665444456886 99999999887
No 105
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.73 E-value=2e-08 Score=104.66 Aligned_cols=108 Identities=24% Similarity=0.275 Sum_probs=70.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccc-----------------cc-c------------c
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPS-----------------VT-N------------G 104 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~-----------------~~-~------------g 104 (584)
+..++|+|||||++|+++|..|++.|++|+|||+.+.......-.. +. . +
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 3467999999999999999999999999999999876532110000 00 0 0
Q ss_pred --------------ccCcccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEcc
Q 045826 105 --------------TVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAM 170 (584)
Q Consensus 105 --------------~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAt 170 (584)
.+....+...+.+.+.+.++++. ...+|+.++.+. .|.+.++. ++.+|+||.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~-~~~~v~~i~~~~-~v~~~~g~----------~~~ad~vV~Ad 156 (379)
T 3alj_A 89 KSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDIS-VNSEAVAADPVG-RLTLQTGE----------VLEADLIVGAD 156 (379)
T ss_dssp EEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEE-SSCCEEEEETTT-EEEETTSC----------EEECSEEEECC
T ss_pred ceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEeCC-EEEECCCC----------EEEcCEEEECC
Confidence 00011223345566666675542 356788887744 66554432 79999999999
Q ss_pred CCCC
Q 045826 171 GAQA 174 (584)
Q Consensus 171 Gs~~ 174 (584)
|..+
T Consensus 157 G~~s 160 (379)
T 3alj_A 157 GVGS 160 (379)
T ss_dssp CTTC
T ss_pred CccH
Confidence 9864
No 106
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.70 E-value=5e-07 Score=95.26 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=48.4
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc-----ccc--ccCcccccHHHHHHHHHcCCcE
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV-----TNG--TVEARSIVEPIRNIVRKKGMDI 126 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~-----~~g--~~~~~~i~~~~~~~~~~~g~~v 126 (584)
+||||||||++||+||++|++.|++|+|+|+++..++....... ..| ...+......+.++++..+...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 76 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASV 76 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCc
Confidence 48999999999999999999999999999999887765433211 111 1111112235677888887543
No 107
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.69 E-value=1.5e-08 Score=110.82 Aligned_cols=117 Identities=18% Similarity=0.228 Sum_probs=77.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC-CCCCCCccccc--------------ccc-----------------
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN-YFAFTPLLPSV--------------TNG----------------- 104 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~-~~~~~p~~~~~--------------~~g----------------- 104 (584)
.+||||||||+||++||..|++.|.+|+|||++. .++..+..+.. ..+
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 5799999999999999999999999999999974 23321111000 000
Q ss_pred ------------ccCcccccHHHHHHHHH-cCCcEEEEEEEEEEEecCCCEEE-EeecCccCCCCCceEEEeCCEEEEcc
Q 045826 105 ------------TVEARSIVEPIRNIVRK-KGMDIQFKEAECYKIDAEKKQIY-CRTTEDRTCGGKEEFALDYDILVIAM 170 (584)
Q Consensus 105 ------------~~~~~~i~~~~~~~~~~-~g~~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LVlAt 170 (584)
..+...+...+.+.+.+ .+ +++++++|+++..+++.+. +.... + ..+.+|.||+||
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~G--VeI~~~~Vt~L~~e~g~V~GV~t~d-----G---~~i~AdaVVLAT 176 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQEN--LYIKQEEVVDIIVKNNQVVGVRTNL-----G---VEYKTKAVVVTT 176 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTT--EEEEESCEEEEEESSSBEEEEEETT-----S---CEEECSEEEECC
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCC--CEEEEeEEEEEEecCCEEEEEEECC-----C---cEEEeCEEEEcc
Confidence 00011223335555655 35 6667899999987665432 22221 1 279999999999
Q ss_pred CCCCCCCCCCCcc
Q 045826 171 GAQANTFNTPGVV 183 (584)
Q Consensus 171 Gs~~~~~~ipG~~ 183 (584)
|..++.+.++|..
T Consensus 177 G~~s~~~~~~G~~ 189 (637)
T 2zxi_A 177 GTFLNGVIYIGDK 189 (637)
T ss_dssp TTCBTCEEEETTE
T ss_pred CCCccCceeccce
Confidence 9988777777754
No 108
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.68 E-value=9.4e-08 Score=100.91 Aligned_cols=52 Identities=13% Similarity=0.189 Sum_probs=42.3
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
...+.+.+.+.+++.|++|+++++|++|+. +++ + . .+|++ +.+|.||+|+|.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~-~~g~~--~~ad~Vv~a~~~ 241 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-T-RDNEE--YSFDVAISNVGV 241 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-E-TTCCE--EECSEEEECSCH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-E-eCCcE--EEeCEEEECCCH
Confidence 467888888999999999999999999953 456 3 3 34654 999999999993
No 109
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.64 E-value=2.9e-08 Score=104.68 Aligned_cols=109 Identities=18% Similarity=0.212 Sum_probs=72.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC--------cccc-------cc------------------
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP--------LLPS-------VT------------------ 102 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p--------~~~~-------~~------------------ 102 (584)
..+||+|||||++|+++|..|++.|++|+|||+++..+... .+.. ..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 35799999999999999999999999999999987653211 0000 00
Q ss_pred ----------------ccc----cCcccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEe
Q 045826 103 ----------------NGT----VEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALD 162 (584)
Q Consensus 103 ----------------~g~----~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~ 162 (584)
.+. .....+...+.+.+++.++++ +...+|+.+..++..+.+.... ..+.
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i-~~~~~V~~i~~~~~~~~V~~~~---------g~i~ 175 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQL-RLETSIGEVERTASGFRVTTSA---------GTVD 175 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEE-ECSCCEEEEEEETTEEEEEETT---------EEEE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEE-EECCEEEEEEEeCCEEEEEECC---------cEEE
Confidence 000 001133444556666677555 2357888888777666665432 1799
Q ss_pred CCEEEEccCCCC
Q 045826 163 YDILVIAMGAQA 174 (584)
Q Consensus 163 yD~LVlAtGs~~ 174 (584)
+|+||+|+|..+
T Consensus 176 ad~VIlAtG~~S 187 (417)
T 3v76_A 176 AASLVVASGGKS 187 (417)
T ss_dssp ESEEEECCCCSS
T ss_pred eeEEEECCCCcc
Confidence 999999999875
No 110
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.64 E-value=1.4e-06 Score=89.65 Aligned_cols=65 Identities=8% Similarity=0.126 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce-EEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHh
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLSD--KE-ISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI 345 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~ 345 (584)
+..+.+.+.+.+++.|++++++++|++++. ++ +.+.. .+|+..++.+|.||+|+|... ..++..+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~~~~~a~~VV~A~G~~s----~~l~~~~ 216 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDF-GGAEPMTLSCRVLINAAGLHA----PGLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEE-CTTSCEEEEEEEEEECCGGGH----HHHHHTE
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEE-CCCceeEEEeCEEEECCCcch----HHHHHHh
Confidence 457788888999999999999999999953 34 55443 446433599999999999533 2455544
No 111
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.64 E-value=5.1e-08 Score=105.34 Aligned_cols=121 Identities=16% Similarity=0.143 Sum_probs=77.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc--------cc------c--------cCccccc
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT--------NG------T--------VEARSIV 112 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~--------~g------~--------~~~~~i~ 112 (584)
...++|+|||||++|+++|..|++.|++|+|||+++..+......... .| . +....+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 346899999999999999999999999999999987654321110000 00 0 1112334
Q ss_pred HHHHHHHHHcCCcEEEEEEEEEEEecC---CC--EEEEeec-CccCCCCCceEEEeCCEEEEccCCCCCCCCCCCc
Q 045826 113 EPIRNIVRKKGMDIQFKEAECYKIDAE---KK--QIYCRTT-EDRTCGGKEEFALDYDILVIAMGAQANTFNTPGV 182 (584)
Q Consensus 113 ~~~~~~~~~~g~~v~~~~~~v~~id~~---~~--~v~~~~~-~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ipG~ 182 (584)
..+.+.+.+.++++ +...+|+.+..+ .+ .|.+.+. .+ +...+.+|+||+|+|..+......+.
T Consensus 170 ~~L~~~~~~~gv~v-~~~~~v~~i~~~~~~~~~~~v~~~~~~~g------~~~~i~ad~VV~A~G~~S~~r~~~~~ 238 (497)
T 2bry_A 170 LLLLKVALLLGVEI-HWGVKFTGLQPPPRKGSGWRAQLQPNPPA------QLASYEFDVLISAAGGKFVPEGFTIR 238 (497)
T ss_dssp HHHHHHHHHTTCEE-EESCEEEEEECCCSTTCCBEEEEESCCCH------HHHTCCBSEEEECCCTTCCCTTCEEE
T ss_pred HHHHHHHHhCCCEE-EeCCEEEEEEEecCCCCEEEEEEEECCCC------CEEEEEcCEEEECCCCCcccccccch
Confidence 44666666677665 346788888763 22 4544321 11 01268999999999998766555443
No 112
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.63 E-value=1.7e-06 Score=90.43 Aligned_cols=55 Identities=15% Similarity=0.186 Sum_probs=41.9
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
+..+.+.+.+.+++.|++++.+++|+++. ++.+....+.+| . +.+|.||+|+|..
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~--~~a~~vV~a~G~~ 229 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-T--IHAGKVALAGAGH 229 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-C--EEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-e--EECCEEEECCchh
Confidence 35777888889999999999999999985 344432233446 3 8999999999953
No 113
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.61 E-value=9.8e-08 Score=95.32 Aligned_cols=118 Identities=15% Similarity=0.160 Sum_probs=69.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccC-CCeEEEEcCCCCCCCCCcccc--------------------cc---cccc----Cc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN-SFEVQVVSPRNYFAFTPLLPS--------------------VT---NGTV----EA 108 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~-g~~V~lid~~~~~~~~p~~~~--------------------~~---~g~~----~~ 108 (584)
.+||||||||++|+++|..|++. |.+|+|||+++..+....... +. .+.. ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 46999999999999999999986 999999999876543211000 00 0000 11
Q ss_pred ccccHHHHHHHHH-cCCcEEEE-EEEEEEEecCCCEE---EEeec----CccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 109 RSIVEPIRNIVRK-KGMDIQFK-EAECYKIDAEKKQI---YCRTT----EDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 109 ~~i~~~~~~~~~~-~g~~v~~~-~~~v~~id~~~~~v---~~~~~----~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
.++...+.+.+.+ .+ ++++ ..+|++++.++..+ .+... ...+....+...+.+|.+|+|+|..+..
T Consensus 119 ~~~~~~l~~~~~~~~g--v~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPN--VKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHTSTT--EEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHhcCC--CEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 1222233333433 45 4444 56889998766644 33210 0000000112479999999999987653
No 114
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.57 E-value=6.7e-07 Score=92.96 Aligned_cols=76 Identities=14% Similarity=0.178 Sum_probs=55.5
Q ss_pred hCcCCC-CCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEE
Q 045826 252 LYPSLK-EFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVW 328 (584)
Q Consensus 252 ~~~~~~-~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~ 328 (584)
.+|.+. +.....++.+.+..+. +..+...+.+.+++.|++++.+++|++++ ++++.+.. .+| . +.+|.||+
T Consensus 126 ~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~~g-~--~~a~~vV~ 199 (389)
T 2gf3_A 126 RWPGITVPENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIET-ANG-S--YTADKLIV 199 (389)
T ss_dssp HSTTCCCCTTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEE-TTE-E--EEEEEEEE
T ss_pred hCCCcccCCCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEe-CCC-E--EEeCEEEE
Confidence 345443 3467777777665554 36777888899999999999999999985 34565554 334 3 99999999
Q ss_pred ccCCC
Q 045826 329 STGIG 333 (584)
Q Consensus 329 a~G~~ 333 (584)
|+|..
T Consensus 200 A~G~~ 204 (389)
T 2gf3_A 200 SMGAW 204 (389)
T ss_dssp CCGGG
T ss_pred ecCcc
Confidence 99953
No 115
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.57 E-value=2.2e-08 Score=108.17 Aligned_cols=154 Identities=16% Similarity=0.146 Sum_probs=98.5
Q ss_pred eCCEEEEccCCCCCCCCCCCcc-cccccccCHHHHHHHHHHHHHHHHHhcCCCCCHHHHhccceEEEECCChhHHHHHHH
Q 045826 162 DYDILVIAMGAQANTFNTPGVV-EHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAA 240 (584)
Q Consensus 162 ~yD~LVlAtGs~~~~~~ipG~~-~~~~~~~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~~gvE~A~~ 240 (584)
.||.+++++|+.+..+++++.. +..+..+...+..++... ................+|+|||||++|+.+|..
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~ 110 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDK------RASQPVYQQGQACTNTKCLVVGAGPCGLRAAVE 110 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHH------HHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhh------hhccccccCccccCCCCEEEECccHHHHHHHHH
Confidence 4788999999998766655543 233444444444332100 000000000111235689999999999999999
Q ss_pred HHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-----cc----------------------------HHHHHHHHHHH
Q 045826 241 LHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-----FD----------------------------KRITASAEEKF 287 (584)
Q Consensus 241 l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-----~~----------------------------~~~~~~~~~~L 287 (584)
|++.+ .+|+|+++.+.+... .+ ..+.+.+.+.+
T Consensus 111 La~~G--------------~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 176 (497)
T 2bry_A 111 LALLG--------------ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVA 176 (497)
T ss_dssp HHHTT--------------CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHH
T ss_pred HHHCC--------------CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHH
Confidence 99864 899999988654210 01 45666778888
Q ss_pred HhCCcEEEeCCceeEEcC-----Ce--EEEEeCCCCeEEEEecceEEEccCCCCC
Q 045826 288 KRDGIDLKTGSMVVKLSD-----KE--ISTKDRATGQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 288 ~~~GV~v~~~~~V~~v~~-----~~--v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 335 (584)
++.||+++++++|++++. +. +.+.+..+|+..++.+|.||.|+|..+.
T Consensus 177 ~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 177 LLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 889999999999999964 22 3332211462223899999999995443
No 116
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.53 E-value=1.5e-06 Score=95.56 Aligned_cols=38 Identities=21% Similarity=0.350 Sum_probs=34.4
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
.++.+||||||||++|+++|..|++.|++|+|||+.+.
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 34568999999999999999999999999999999864
No 117
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.53 E-value=6.5e-08 Score=100.53 Aligned_cols=39 Identities=15% Similarity=0.234 Sum_probs=34.2
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 53 GEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 53 ~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
+...++||||||||++|+++|+.|++.|++|+|||+...
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 444568999999999999999999999999999998753
No 118
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.48 E-value=2.3e-07 Score=100.77 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
...+||||||||++|+++|..|++.|++|+|||+.+.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 3457999999999999999999999999999999853
No 119
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.47 E-value=2.1e-07 Score=102.16 Aligned_cols=116 Identities=17% Similarity=0.248 Sum_probs=75.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC-CCCCCCccccc--------------ccc----------------
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN-YFAFTPLLPSV--------------TNG---------------- 104 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~-~~~~~p~~~~~--------------~~g---------------- 104 (584)
..+||+|||||+||+++|..|++.|.+|+|||+++ .++..+..+.. ..+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 45799999999999999999999999999999874 23221111000 000
Q ss_pred -------------ccCcccccHHHHHHHHHc-CCcEEEEEEEEEEEecCCCEEE-EeecCccCCCCCceEEEeCCEEEEc
Q 045826 105 -------------TVEARSIVEPIRNIVRKK-GMDIQFKEAECYKIDAEKKQIY-CRTTEDRTCGGKEEFALDYDILVIA 169 (584)
Q Consensus 105 -------------~~~~~~i~~~~~~~~~~~-g~~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LVlA 169 (584)
..+...+...+.+.+.+. + +++++++|+.+..++..|. +.... + ..+.+|.||+|
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~G--V~I~~~~V~~L~~d~g~V~GV~t~~-----G---~~i~Ad~VVLA 169 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPN--IDLLQDTVIGVSANSGKFSSVTVRS-----G---RAIQAKAAILA 169 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTT--EEEEECCEEEEEEETTEEEEEEETT-----S---CEEEEEEEEEC
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCC--CEEEeeEEEEEEecCCEEEEEEECC-----C---cEEEeCEEEEC
Confidence 001112233355556553 5 6677889999887666644 33222 1 17999999999
Q ss_pred cCCCCCCCCCCC
Q 045826 170 MGAQANTFNTPG 181 (584)
Q Consensus 170 tGs~~~~~~ipG 181 (584)
+|+.++....+|
T Consensus 170 TG~~s~~~i~~G 181 (641)
T 3cp8_A 170 CGTFLNGLIHIG 181 (641)
T ss_dssp CTTCBTCEEEET
T ss_pred cCCCCCccceee
Confidence 999876544444
No 120
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.44 E-value=3.5e-07 Score=96.00 Aligned_cols=41 Identities=20% Similarity=0.196 Sum_probs=33.7
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 52 EGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 52 ~~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
+...+++||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 34455689999999999999999999999999999998754
No 121
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.43 E-value=3.4e-07 Score=93.70 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=33.9
Q ss_pred CCeEEEECCcHHHHHHHHhccc---CCCeEEEEcCCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS---NSFEVQVVSPRNYFAF 94 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~---~g~~V~lid~~~~~~~ 94 (584)
|+||+|||||++|+++|+.|++ .|++|+|+|+++..++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 3689999999999999999998 9999999999865543
No 122
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.43 E-value=2.5e-07 Score=96.09 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=35.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFA 93 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~ 93 (584)
|+.+||+||||||||+++|..|++.|++|+|||+++.++
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 446899999999999999999999999999999987543
No 123
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.43 E-value=3.6e-07 Score=97.32 Aligned_cols=36 Identities=19% Similarity=0.196 Sum_probs=33.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
.+||||||||++|+++|..|++.|.+|+|||+.+..
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~ 61 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKL 61 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999998754
No 124
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.42 E-value=2e-07 Score=96.64 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=33.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
+.+++|||||||++|+++|+.|+ .|++|+|+|+++..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 44689999999999999999999 69999999998644
No 125
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.41 E-value=2.4e-06 Score=90.47 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=44.8
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCC---ceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCCCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGS---MVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~---~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 335 (584)
+..+...+.+.+++.||+|++++ +|+++. +++++...+.+|++ +.+|.||+|+|....
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~--i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKI--WRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEE--EECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCE--EECCEEEECCCCChh
Confidence 35677788888999999999999 999984 45666233355764 999999999995443
No 126
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.40 E-value=4.1e-06 Score=94.13 Aligned_cols=57 Identities=14% Similarity=0.105 Sum_probs=44.2
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCe-EEEEecceEEEccCCCCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQ-ISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~-~~~i~~D~vI~a~G~~~~ 335 (584)
+..+...+.+.+++.|++|+++++|+++. ++++.+.. .+|+ . +.+|.||+|+|....
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~~--i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTF-GQSQAA--KHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEE-C-CCCC--EEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEe-CCCcEE--EECCEEEECCCcchh
Confidence 36777888888999999999999999985 44565554 3354 4 899999999996544
No 127
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.38 E-value=3e-07 Score=96.22 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
++||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 469999999999999999999999999999998654
No 128
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.38 E-value=8.4e-07 Score=95.06 Aligned_cols=42 Identities=24% Similarity=0.180 Sum_probs=37.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCCCCCCCCcc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRNYFAFTPLL 98 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~~~~~~p~~ 98 (584)
++||+|||||++||++|++|++.|. +|+|+|+++..++....
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 4799999999999999999999999 99999999988776543
No 129
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.36 E-value=6.8e-07 Score=90.94 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=33.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
++||+|||||++|+++|..|++.|++|+|||+++..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 469999999999999999999999999999998754
No 130
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.36 E-value=1.1e-07 Score=105.48 Aligned_cols=38 Identities=24% Similarity=0.328 Sum_probs=34.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF 94 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~ 94 (584)
.+||||||||++|+++|..|++.|++|+|||+.+..++
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 57999999999999999999999999999999886654
No 131
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.36 E-value=1.1e-06 Score=98.72 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
..+||||||||++|+++|+.|++.|++|+|||+++..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~ 307 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAP 307 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3479999999999999999999999999999996543
No 132
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.35 E-value=9.7e-07 Score=92.88 Aligned_cols=35 Identities=31% Similarity=0.607 Sum_probs=32.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
.+||||||||++|+++|..|++.|++|+|||+.+.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999863
No 133
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.35 E-value=7.4e-07 Score=92.51 Aligned_cols=34 Identities=35% Similarity=0.487 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+||||||||++|+++|+.|++.|++|+|||++.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5799999999999999999999999999999974
No 134
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.35 E-value=9.2e-07 Score=94.37 Aligned_cols=102 Identities=18% Similarity=0.211 Sum_probs=76.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||++|+.+|..|++.|.+|+|+++.+.+.- . ...++...+.+.+++.|+++ +...+|+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-----~------~~~~~~~~l~~~l~~~Gv~i-~~~~~V~~i 234 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-----T------MDLEVSRAAERVFKKQGLTI-RTGVRVTAV 234 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T------SCHHHHHHHHHHHHHHTCEE-ECSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EECCEEEEE
Confidence 57999999999999999999999999999999875321 0 12245556777788888655 235688999
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+.+++.+.+....+ .++++|.||+|+|.+|+...
T Consensus 235 ~~~~~~v~v~~~~g--------~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 235 VPEAKGARVELEGG--------EVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEETTEEEEEETTS--------CEEEESEEEECSCEEECCTT
T ss_pred EEeCCEEEEEECCC--------eEEEcCEEEECcCCCcCCCC
Confidence 87776665543221 27999999999999987654
No 135
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.33 E-value=5.3e-07 Score=93.94 Aligned_cols=113 Identities=12% Similarity=0.195 Sum_probs=69.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc--------------c-cc--------------cccccc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL--------------L-PS--------------VTNGTV 106 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~--------------~-~~--------------~~~g~~ 106 (584)
..+||+|||||++|+++|..|++.|++|+|||+++..+.... + .. ...+..
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCE
Confidence 357999999999999999999999999999999875432100 0 00 000000
Q ss_pred --C---------------cccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEE-EeecCccCCCCCceEEEeCCEEEE
Q 045826 107 --E---------------ARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIY-CRTTEDRTCGGKEEFALDYDILVI 168 (584)
Q Consensus 107 --~---------------~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LVl 168 (584)
. ...+...+.+.+.+.|+++ +...+|+.+..++..+. +.... ..+..++.+|.||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i-~~~~~v~~i~~~~~~v~gv~~~~-----~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV-WVKSPALGVIKENGKVAGAKIRH-----NNEIVDVRAKMVIA 156 (397)
T ss_dssp CEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE-ESSCCEEEEEEETTEEEEEEEEE-----TTEEEEEEEEEEEE
T ss_pred EEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE-EECCEEEEEEEeCCEEEEEEEEE-----CCeEEEEEcCEEEE
Confidence 0 0011123445555567554 33668888877766543 32210 01124899999999
Q ss_pred ccCCCC
Q 045826 169 AMGAQA 174 (584)
Q Consensus 169 AtGs~~ 174 (584)
|+|...
T Consensus 157 A~G~~s 162 (397)
T 3cgv_A 157 ADGFES 162 (397)
T ss_dssp CCCTTC
T ss_pred CCCcch
Confidence 999754
No 136
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.33 E-value=1.6e-06 Score=95.31 Aligned_cols=38 Identities=21% Similarity=0.202 Sum_probs=34.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF 94 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~ 94 (584)
..||||||||+||+++|..|++.|++|+|||+.+..+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg 163 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGG 163 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 57999999999999999999999999999999886554
No 137
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.30 E-value=1.1e-06 Score=92.04 Aligned_cols=37 Identities=32% Similarity=0.467 Sum_probs=33.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
..++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 4579999999999999999999999999999998653
No 138
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.30 E-value=4.8e-06 Score=91.18 Aligned_cols=57 Identities=23% Similarity=0.158 Sum_probs=44.2
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCe---EEEEeCCCCeEEEEecceEEEccCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKE---ISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
+..+...+.+.+++.|++++++++|+++. +++ |.+.+..+|+..++.+|.||.|+|.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ 230 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGP 230 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCc
Confidence 35677777888889999999999999984 343 5555544565556999999999994
No 139
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.29 E-value=8e-07 Score=97.51 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=68.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc-----------------cc----------cc-cccc--
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL-----------------LP----------SV-TNGT-- 105 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~-----------------~~----------~~-~~g~-- 105 (584)
..++|+|||||++|+++|..|++.|++|+|||+.+....... +. .. ..+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 357999999999999999999999999999998754321100 00 00 0000
Q ss_pred --c---------------CcccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEee--cCccCCCCCceEEEeCCEE
Q 045826 106 --V---------------EARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRT--TEDRTCGGKEEFALDYDIL 166 (584)
Q Consensus 106 --~---------------~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~--~~~~~~~~~~~~~i~yD~L 166 (584)
+ +...+...+.+.+.+.++++ +...+|+.++.+...+.+.. .++ +.++.+|+|
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i-~~~~~v~~l~~~~~~v~v~~~~~~G-------~~~~~a~~v 199 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEI-PRGHEVTRLRQDAEAVEVTVAGPSG-------PYPVRARYG 199 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEEC-CBSCEEEECCBCSSCEEEEEEETTE-------EEEEEESEE
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEE-EeCCEEEEEEEcCCeEEEEEEeCCC-------cEEEEeCEE
Confidence 0 01112223455555566443 23568888887766555433 221 138999999
Q ss_pred EEccCCCC
Q 045826 167 VIAMGAQA 174 (584)
Q Consensus 167 VlAtGs~~ 174 (584)
|.|.|...
T Consensus 200 V~ADG~~S 207 (570)
T 3fmw_A 200 VGCDGGRS 207 (570)
T ss_dssp EECSCSSC
T ss_pred EEcCCCCc
Confidence 99999864
No 140
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.29 E-value=2e-06 Score=89.87 Aligned_cols=36 Identities=19% Similarity=0.325 Sum_probs=33.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
.+++|+|||||++|+++|..|++.|++|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357999999999999999999999999999999865
No 141
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.29 E-value=5.2e-07 Score=93.28 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
..||+|||||++|+++|+.|++.|++|+|||+...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 36999999999999999999999999999999754
No 142
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.28 E-value=1.8e-06 Score=94.05 Aligned_cols=36 Identities=28% Similarity=0.387 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999998643
No 143
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.27 E-value=2.1e-06 Score=92.65 Aligned_cols=115 Identities=18% Similarity=0.216 Sum_probs=71.7
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc-----------------cccccc----------c-c
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL-----------------LPSVTN----------G-T 105 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~-----------------~~~~~~----------g-~ 105 (584)
...+++|+|||||++|+++|..|++.|++|+|||+.+.....+. ...+.. + .
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 34568999999999999999999999999999999865432110 000000 0 0
Q ss_pred cC--------c-------ccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEcc
Q 045826 106 VE--------A-------RSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAM 170 (584)
Q Consensus 106 ~~--------~-------~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAt 170 (584)
++ + ..+..-+.+.+.+.+++++ ...+|+.+..+...|.+....+ .+..++.+|+||.|.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~~-----~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIR-RGHEVLSLTDDGAGVTVEVRGP-----EGKHTLRAAYLVGCD 161 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEE-ETCEEEEEEEETTEEEEEEEET-----TEEEEEEESEEEECC
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEE-CCcEEEEEEEcCCeEEEEEEcC-----CCCEEEEeCEEEECC
Confidence 00 0 0111123444555676653 3678888877666555443211 112479999999999
Q ss_pred CCCC
Q 045826 171 GAQA 174 (584)
Q Consensus 171 Gs~~ 174 (584)
|...
T Consensus 162 G~~S 165 (500)
T 2qa1_A 162 GGRS 165 (500)
T ss_dssp CTTC
T ss_pred Ccch
Confidence 9864
No 144
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.26 E-value=2.4e-06 Score=88.92 Aligned_cols=101 Identities=18% Similarity=0.305 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+... ..+.++...+.+.+++.|+++ +...+|..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~~~~~~~~~l~~~l~~~gv~i-~~~~~v~~i 213 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------LLHPAAAKAVQAGLEGLGVRF-HLGPVLASL 213 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHTTTCEE-EESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------ccCHHHHHHHHHHHHHcCCEE-EeCCEEEEE
Confidence 689999999999999999999999999999998753321 112345566778888888654 235578888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+.+++.+.+...++ .++++|.+|+|+|..|+.
T Consensus 214 ~~~~~~~~v~~~~g--------~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 214 KKAGEGLEAHLSDG--------EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEETTEEEEEETTS--------CEEEESEEEECSCEEECC
T ss_pred EecCCEEEEEECCC--------CEEECCEEEECcCCCcCH
Confidence 77655444433221 279999999999998764
No 145
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.26 E-value=2.5e-06 Score=91.20 Aligned_cols=107 Identities=17% Similarity=0.244 Sum_probs=76.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
+++|+|||||+.|+.+|..|++.|.+|+||++.+.+... ...++...+.+.+++.|+++ +...+|+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~gV~i-~~~~~v~~i 236 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-----------GDPETAALLRRALEKEGIRV-RTKTKAVGY 236 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------SCHHHHHHHHHHHHHTTCEE-ECSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------cCHHHHHHHHHHHHhcCCEE-EcCCEEEEE
Confidence 579999999999999999999999999999998753211 12345566778888888665 235688899
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+.+++.+.+....+ ...+..++++|.||+|+|..|+...
T Consensus 237 ~~~~~~~~v~~~~~---~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 237 EKKKDGLHVRLEPA---EGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEETTEEEEEEEET---TCCSCEEEEESEEEECSCEEESCTT
T ss_pred EEeCCEEEEEEeec---CCCceeEEEcCEEEECCCcccCCCC
Confidence 87665444332100 0011237899999999999987654
No 146
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.26 E-value=2e-06 Score=94.42 Aligned_cols=39 Identities=23% Similarity=0.235 Sum_probs=34.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF 94 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~ 94 (584)
...||||||||++|+++|..|++.|++|+|||+.+..+.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGG 158 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 346999999999999999999999999999999876543
No 147
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.26 E-value=1.2e-06 Score=91.46 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=32.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
..||||||||++|+++|+.|++.|++|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 36999999999999999999999999999999764
No 148
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.25 E-value=1.9e-06 Score=93.37 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+||||||||++|+++|..|++.|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 4799999999999999999999999999999986
No 149
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=2.8e-06 Score=90.63 Aligned_cols=105 Identities=17% Similarity=0.282 Sum_probs=75.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++...+.+.+++.|+++ +...+|..+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~i 237 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-----G------FEKQMAAIIKKRLKKKGVEV-VTNALAKGA 237 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T------SCHHHHHHHHHHHHHTTCEE-EESEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EeCCEEEEE
Confidence 57999999999999999999999999999999875321 0 12245566777888888665 335788888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+.+...+.+.... +.+..++++|.+|+|+|.+|+...
T Consensus 238 ~~~~~~~~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 238 EEREDGVTVTYEA-----NGETKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp EEETTEEEEEEEE-----TTEEEEEEESEEEECSCEEESCSS
T ss_pred EEeCCeEEEEEEe-----CCceeEEEcCEEEECcCCCcccCc
Confidence 8766544433110 001237999999999999987643
No 150
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.24 E-value=2.5e-06 Score=89.69 Aligned_cols=97 Identities=13% Similarity=0.257 Sum_probs=74.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ..+.++...+.+.+++.|+++ +...+|..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i-~~~~~v~~i 213 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR----------AAPATLADFVARYHAAQGVDL-RFERSVTGS 213 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHHTTCEE-EESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------ccCHHHHHHHHHHHHHcCcEE-EeCCEEEEE
Confidence 579999999999999999999999999999998753221 112245566778888888665 235578888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+ ++ .|.+.++. ++++|.+|+|+|..|+.
T Consensus 214 ~-~~-~v~~~~g~----------~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 214 V-DG-VVLLDDGT----------RIAADMVVVGIGVLAND 241 (408)
T ss_dssp E-TT-EEEETTSC----------EEECSEEEECSCEEECC
T ss_pred E-CC-EEEECCCC----------EEEcCEEEECcCCCccH
Confidence 8 43 67665432 89999999999998764
No 151
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.24 E-value=4.7e-07 Score=87.94 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=36.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP 96 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p 96 (584)
..+|+|||||||||+||..|++.|++|+|||+++..++..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 3689999999999999999999999999999998876643
No 152
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.23 E-value=2.7e-06 Score=90.73 Aligned_cols=112 Identities=17% Similarity=0.265 Sum_probs=69.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCC--CCCc--------cccc---------------------cccc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFA--FTPL--------LPSV---------------------TNGT 105 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~--~~p~--------~~~~---------------------~~g~ 105 (584)
.+||+|||||++|+++|..|++.|++|+|||+.+... ..+. +... ..+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 4799999999999999999999999999999986421 1100 0000 0000
Q ss_pred -----------cCcccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEE---EEeec-CccCCCCCceEEEeCCEEEEcc
Q 045826 106 -----------VEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQI---YCRTT-EDRTCGGKEEFALDYDILVIAM 170 (584)
Q Consensus 106 -----------~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v---~~~~~-~~~~~~~~~~~~i~yD~LVlAt 170 (584)
++...+...+.+.+.+.|+++ +...+|+.++.++..+ .+... + + +..++.+|.||.|+
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i-~~~~~v~~i~~~~~~v~gv~~~~~~~-----G-~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEI-WDLTTAMKPIFEDGYVKGAVLFNRRT-----N-EELTVYSKVVVEAT 158 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEE-ESSEEEEEEEEETTEEEEEEEEETTT-----T-EEEEEECSEEEECC
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEE-EeCcEEEEEEEECCEEEEEEEEEcCC-----C-ceEEEEcCEEEECc
Confidence 000112222444455567555 3367888887766654 34321 1 1 12379999999999
Q ss_pred CCCCC
Q 045826 171 GAQAN 175 (584)
Q Consensus 171 Gs~~~ 175 (584)
|....
T Consensus 159 G~~s~ 163 (453)
T 3atr_A 159 GYSRS 163 (453)
T ss_dssp GGGCT
T ss_pred CCchh
Confidence 98654
No 153
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.22 E-value=2.3e-06 Score=91.09 Aligned_cols=100 Identities=17% Similarity=0.256 Sum_probs=74.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEE-EEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKE-AECY 134 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~-~~v~ 134 (584)
..++|+|||||++|+.+|..|++.|.+|+|+|+.+.+... ....++...+.+.+++.| ++++. .+|.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~g--v~i~~~~~v~ 215 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------YLDKEFTDVLTEEMEANN--ITIATGETVE 215 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TCCHHHHHHHHHHHHTTT--EEEEESCCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc----------cCCHHHHHHHHHHHHhCC--CEEEcCCEEE
Confidence 4689999999999999999999999999999998754321 012345566777888888 54544 5788
Q ss_pred EEecCCCE--EEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 135 KIDAEKKQ--IYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 135 ~id~~~~~--v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
.++.+++. +.+ ++ .++++|.+|+|+|.+|+...
T Consensus 216 ~i~~~~~v~~v~~-~~----------~~i~~d~vi~a~G~~p~~~~ 250 (447)
T 1nhp_A 216 RYEGDGRVQKVVT-DK----------NAYDADLVVVAVGVRPNTAW 250 (447)
T ss_dssp EEECSSBCCEEEE-SS----------CEEECSEEEECSCEEESCGG
T ss_pred EEEccCcEEEEEE-CC----------CEEECCEEEECcCCCCChHH
Confidence 88876432 333 21 17999999999999887543
No 154
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=1.8e-06 Score=92.28 Aligned_cols=102 Identities=18% Similarity=0.307 Sum_probs=75.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- . ...++...+.+.+++.|+++ +...+|+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~i 238 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-----T------YDSELTAPVAESLKKLGIAL-HLGHSVEGY 238 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHHTCEE-ETTCEEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EECCEEEEE
Confidence 57999999999999999999999999999999875421 0 12244556777788888654 235689999
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+. ++ +.+.... + +..++++|.||+|+|.+|+...
T Consensus 239 ~~-~~-v~v~~~~-----G-~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 239 EN-GC-LLANDGK-----G-GQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp ET-TE-EEEECSS-----S-CCCEECCSCEEECCCEEECCSS
T ss_pred Ee-CC-EEEEECC-----C-ceEEEECCEEEECcCCCcCCCC
Confidence 87 44 6555211 1 1137999999999999987653
No 155
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.20 E-value=3.1e-06 Score=91.33 Aligned_cols=113 Identities=17% Similarity=0.223 Sum_probs=70.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc-----------------cccccc----------c----
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL-----------------LPSVTN----------G---- 104 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~-----------------~~~~~~----------g---- 104 (584)
..++|+|||||++|+++|..|++.|++|+|||+.+.....+. ...+.. +
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 467999999999999999999999999999999865432110 000000 0
Q ss_pred --ccC---c-------ccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCC
Q 045826 105 --TVE---A-------RSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGA 172 (584)
Q Consensus 105 --~~~---~-------~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs 172 (584)
... + ..+..-+.+.+.+.+++++ ...+|+.+..+...|.+....+ ++ +.++.+|+||.|.|.
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~~---~g--~~~~~a~~vVgADG~ 164 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELL-RGHTVRALTDEGDHVVVEVEGP---DG--PRSLTTRYVVGCDGG 164 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEE-ESCEEEEEEECSSCEEEEEECS---SC--EEEEEEEEEEECCCT
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEeCCEEEEEEEcC---CC--cEEEEeCEEEEccCc
Confidence 000 0 0111224444555675653 3568888877666554432211 01 247999999999998
Q ss_pred CC
Q 045826 173 QA 174 (584)
Q Consensus 173 ~~ 174 (584)
..
T Consensus 165 ~S 166 (499)
T 2qa2_A 165 RS 166 (499)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 156
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.20 E-value=5.9e-06 Score=84.32 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=74.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc---------------------ccc-------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL---------------------NMF------- 275 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------------~~~------- 275 (584)
+|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +.+
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g--------------~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSG--------------LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG 70 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSS--------------CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc
Confidence 8999999999999999998753 7899999886531 111
Q ss_pred ----cHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEE-EEeCCCCeEEEEecceEEEccCCCCCc
Q 045826 276 ----DKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEIS-TKDRATGQISSIPYGMVVWSTGIGTRP 336 (584)
Q Consensus 276 ----~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~-~~~~~~G~~~~i~~D~vI~a~G~~~~p 336 (584)
...+.+++.+.+++.|++++++++|++++. +.+. +.. .+| + +.+|.||+|+|....|
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g-~--~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVAR-DGR-Q--WLARAVISATGTWGEA 134 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEET-TSC-E--EEEEEEEECCCSGGGB
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEe-CCC-E--EEeCEEEECCCCCCCC
Confidence 167888888999999999999999999853 4444 443 445 3 9999999999964443
No 157
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.16 E-value=3.8e-06 Score=89.23 Aligned_cols=37 Identities=30% Similarity=0.192 Sum_probs=32.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCC-CeEEEEcCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNS-FEVQVVSPRNYF 92 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g-~~V~lid~~~~~ 92 (584)
..+||||||||++|+++|+.|++.| .+|+|||++...
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 4579999999999999999999989 999999994433
No 158
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.16 E-value=3.9e-05 Score=88.09 Aligned_cols=55 Identities=18% Similarity=0.311 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
+..+...+.+.+++.|++++.+++|++++ ++++....+.+| + +.+|.||+|+|..
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~--i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-V--IPADIVVSCAGFW 206 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-E--EECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-E--EECCEEEECCccc
Confidence 45777888899999999999999999985 355543333445 3 9999999999953
No 159
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.16 E-value=1.9e-06 Score=89.87 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
.++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 36899999999999999999999999999998863
No 160
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.15 E-value=2.6e-06 Score=89.54 Aligned_cols=99 Identities=15% Similarity=0.291 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ......+...+.+.+++.|+++. ....|..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~----------~~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 211 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV----------RVLGRRIGAWLRGLLTELGVQVE-LGTGVVGF 211 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH----------HHHCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch----------hhcCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 57999999999999999999999999999999875321 00122455667788888885542 36778888
Q ss_pred ecCCC--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKK--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+.+++ .|.+.++. ++++|.+|+|+|..|+.
T Consensus 212 ~~~~~~~~v~~~dg~----------~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 212 SGEGQLEQVMASDGR----------SFVADSALICVGAEPAD 243 (410)
T ss_dssp ECSSSCCEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred eccCcEEEEEECCCC----------EEEcCEEEEeeCCeecH
Confidence 87654 45554432 89999999999998864
No 161
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.15 E-value=5.7e-06 Score=87.07 Aligned_cols=99 Identities=18% Similarity=0.276 Sum_probs=75.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .....+...+.+.+++.|+++ +....|..+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i-~~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------VAGEALSEFYQAEHRAHGVDL-RTGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHHTTCEE-EETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh----------hcCHHHHHHHHHHHHhCCCEE-EECCEEEEE
Confidence 679999999999999999999999999999998754321 112345666778888888665 236678888
Q ss_pred ecCCC---EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
..++. .|.+.++. .+++|.+|+|+|..|+.
T Consensus 221 ~~~~~~v~~v~l~dG~----------~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 221 EGDGTKVTGVRMQDGS----------VIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EESSSBEEEEEESSSC----------EEECSEEEECSCCEESC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECCCCccCh
Confidence 87654 34444432 89999999999998764
No 162
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.15 E-value=5.5e-06 Score=87.84 Aligned_cols=97 Identities=18% Similarity=0.325 Sum_probs=77.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..+++.|.+|+|+++.+.+.- ....++...+.+.+++.++++ +...+|+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~-----------~~d~~~~~~~~~~l~~~gV~i-~~~~~v~~~ 214 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK-----------LMDADMNQPILDELDKREIPY-RLNEEINAI 214 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST-----------TSCGGGGHHHHHHHHHTTCCE-EESCCEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc-----------cccchhHHHHHHHhhccceEE-EeccEEEEe
Confidence 56999999999999999999999999999999875321 112356677888899999777 346778888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.. .+.+.+++ .+++|.+++|+|..|+..
T Consensus 215 ~~~--~v~~~~g~----------~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 215 NGN--EITFKSGK----------VEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp ETT--EEEETTSC----------EEECSEEEECCCEEESCG
T ss_pred cCC--eeeecCCe----------EEeeeeEEEEeceecCcH
Confidence 754 67766543 899999999999988754
No 163
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.14 E-value=7.3e-06 Score=87.93 Aligned_cols=104 Identities=15% Similarity=0.306 Sum_probs=75.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
+++|+|||||+.|+.+|..|++.|.+|+||++.+.+... ...++...+.+.+++.|+++. ...+|+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 250 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-----------MDGEVAKATQKFLKKQGLDFK-LSTKVISA 250 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----------SCHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----------cCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 579999999999999999999999999999998753221 112455667788888886652 35688888
Q ss_pred ec--CCCEE--EEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DA--EKKQI--YCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~--~~~~v--~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+. +++.+ .+.+.. +.+...+++|.+|+|+|.+|+..
T Consensus 251 ~~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 251 KRNDDKNVVEIVVEDTK-----TNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEETTTTEEEEEEEETT-----TTEEEEEEESEEEECSCEEECCT
T ss_pred EEecCCCeEEEEEEEcC-----CCCceEEECCEEEECCCCCcCCC
Confidence 86 55543 333110 00123799999999999998765
No 164
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.13 E-value=5.5e-06 Score=88.81 Aligned_cols=107 Identities=17% Similarity=0.221 Sum_probs=75.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
+++|+|||||+.|+.+|..|++.|.+|+|+++.+.+... . ...++...+.+.+++.|+++ +...+|..+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 246 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV---------G-IDMEISKNFQRILQKQGFKF-KLNTKVTGA 246 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS---------S-CCHHHHHHHHHHHHHTTCEE-ECSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc---------c-cCHHHHHHHHHHHHHCCCEE-EeCceEEEE
Confidence 579999999999999999999999999999998753210 0 12245566778888888665 336688899
Q ss_pred ecCCCE-EEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEKKQ-IYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~~~-v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.+++. +.+...... .....++++|.||+|+|.+|+..
T Consensus 247 ~~~~~~~~~v~~~~~~---~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 247 TKKSDGKIDVSIEAAS---GGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EECTTSCEEEEEEETT---SCCCEEEEESEEEECSCEEECCT
T ss_pred EEcCCceEEEEEEecC---CCCceEEEcCEEEECcCCCcCCC
Confidence 876543 333310000 00113799999999999998764
No 165
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.13 E-value=4.4e-06 Score=84.46 Aligned_cols=92 Identities=12% Similarity=0.110 Sum_probs=72.3
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc---------------cc----ccHHHHHHH
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL---------------NM----FDKRITASA 283 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------~~----~~~~~~~~~ 283 (584)
.+|+|||||+.|+.+|..|++.+ .+|+++++.+.+. +. ...++..++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQ--------------ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 48999999999999999998753 7999999977432 11 136777888
Q ss_pred HHHHHhCCcEEEeCCceeEEcCC---eEEEEeCCCCeEEEEecceEEEccCC
Q 045826 284 EEKFKRDGIDLKTGSMVVKLSDK---EISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 284 ~~~L~~~GV~v~~~~~V~~v~~~---~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
.+.+++.|++++++++|++++.+ ...+.. .+|+ +.+|.||+|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~---~~~d~vVlAtG~ 121 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVT-NEET---HYSKTVIITAGN 121 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEE-SSEE---EEEEEEEECCTT
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEE-CCCE---EEeCEEEECCCC
Confidence 88889999999999999998643 334443 2343 899999999996
No 166
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.12 E-value=4.4e-06 Score=87.71 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=33.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCe-EEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFE-VQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~-V~lid~~~~~ 92 (584)
.++|+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 57999999999999999999999999 9999998754
No 167
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.12 E-value=1.9e-05 Score=81.85 Aligned_cols=98 Identities=19% Similarity=0.239 Sum_probs=74.0
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-----------------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN----------------------------- 273 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~----------------------------- 273 (584)
.+|+|||||++|+.+|..|++.+ .+|+|+++.+.+.+
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G--------------~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNG--------------WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 48999999999999999999864 78888887654421
Q ss_pred ---------------cc-----------cHHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEE
Q 045826 274 ---------------MF-----------DKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVV 327 (584)
Q Consensus 274 ---------------~~-----------~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI 327 (584)
.+ ...+.+.+.+.+++.||+++.+++|++++.++ .+.. .+|++ +.+|.||
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~-~~g~~--~~ad~vV 153 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTL-QTGEV--LEADLIV 153 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEE-TTSCE--EECSEEE
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEE-CCCCE--EEcCEEE
Confidence 00 14556777888888999999999999997555 4433 34764 9999999
Q ss_pred EccCCCCCchHHH
Q 045826 328 WSTGIGTRPVIMD 340 (584)
Q Consensus 328 ~a~G~~~~p~~~~ 340 (584)
.|+|. .+.+..
T Consensus 154 ~AdG~--~s~vr~ 164 (379)
T 3alj_A 154 GADGV--GSKVRD 164 (379)
T ss_dssp ECCCT--TCHHHH
T ss_pred ECCCc--cHHHHH
Confidence 99994 444443
No 168
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.12 E-value=4.3e-06 Score=89.01 Aligned_cols=99 Identities=14% Similarity=0.183 Sum_probs=73.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+...- . . ..++...+.+.+++.|+++ +...+|..+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~-----~-~~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 234 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-----S-----F-DPMISETLVEVMNAEGPQL-HTNAIPKAV 234 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----S-CHHHHHHHHHHHHHHSCEE-ECSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-----h-----h-hHHHHHHHHHHHHHCCCEE-EeCCEEEEE
Confidence 57999999999999999999999999999999875321 0 1 1245566777888888655 235578888
Q ss_pred ecCC-C--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEK-K--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~-~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.++ + .+.+.++. .+++|.||+|+|.+|+..
T Consensus 235 ~~~~~~~~~v~~~~g~----------~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 235 VKNTDGSLTLELEDGR----------SETVDCLIWAIGREPAND 268 (450)
T ss_dssp EECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEeCCcEEEEEECCCc----------EEEcCEEEECCCCCcCCC
Confidence 7653 2 34443322 799999999999998764
No 169
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.12 E-value=3.9e-05 Score=84.35 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=43.6
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEc---CCe---EEEEeCCCCeEEEEecceEEEccCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLS---DKE---ISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~---~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
+..+...+.+.+++.||+|++++.|+++. ++. +.+.+..+|+...+.++.||+|+|-
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 35677778888888999999999999984 232 4444445576556999999999995
No 170
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.11 E-value=3e-05 Score=86.28 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=34.1
Q ss_pred CCCeEEEECCcHHHHHHHHhccc-CCCeEEEEcCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKS-NSFEVQVVSPRNYFA 93 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid~~~~~~ 93 (584)
...+|+|||||++|+++|..|++ .|++|+|||+.+...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 35699999999999999999999 999999999987543
No 171
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.10 E-value=1.1e-05 Score=87.59 Aligned_cols=108 Identities=19% Similarity=0.247 Sum_probs=77.8
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc-------------------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI------------------------------- 271 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i------------------------------- 271 (584)
.+|+|||||++|+.+|..|++.+ .+|+|+++++.+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G--------------~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMG--------------FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTT--------------CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 48999999999999999999854 788899887432
Q ss_pred -----c------cc------------------------------ccHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeE
Q 045826 272 -----L------NM------------------------------FDKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEI 308 (584)
Q Consensus 272 -----l------~~------------------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v 308 (584)
+ +. ....+.+.+.+.+++.||+++++++|+++. ++.+
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 00 014566677788888999999999999984 3444
Q ss_pred EEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC
Q 045826 309 STKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ 347 (584)
Q Consensus 309 ~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l 347 (584)
......+|++ +.+|.||+|+|..+.... .++...++
T Consensus 254 ~gV~l~~G~~--i~Ad~VVlA~G~~s~~~~-~~l~~~Gi 289 (549)
T 3nlc_A 254 TGVTLSNGEE--IKSRHVVLAVGHSARDTF-EMLHERGV 289 (549)
T ss_dssp EEEEETTSCE--EECSCEEECCCTTCHHHH-HHHHHTTC
T ss_pred EEEEECCCCE--EECCEEEECCCCChhhHH-HHHHHcCC
Confidence 4333345765 999999999996544332 24555554
No 172
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.09 E-value=1.4e-05 Score=85.30 Aligned_cols=104 Identities=16% Similarity=0.288 Sum_probs=73.7
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcE---EEEecCCccccc--------------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTR---ITLLEAGDHILN-------------------------- 273 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~---V~lv~~~~~il~-------------------------- 273 (584)
++|+|||||++|+.+|..|++... .+.+ |+++++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~-----------~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~ 71 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE-----------KGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLW 71 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH-----------TTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhh-----------cCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchh
Confidence 389999999999999999987221 1256 999998764310
Q ss_pred -----------cc---------------cHHHHHHHHHHHHhCCcE--EEeCCceeEEc--CC----eEEEEeCCCCeEE
Q 045826 274 -----------MF---------------DKRITASAEEKFKRDGID--LKTGSMVVKLS--DK----EISTKDRATGQIS 319 (584)
Q Consensus 274 -----------~~---------------~~~~~~~~~~~L~~~GV~--v~~~~~V~~v~--~~----~v~~~~~~~G~~~ 319 (584)
.+ ...+.+++.+.+++.|++ ++++++|+.++ ++ .|++.+..+|+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~ 151 (464)
T 2xve_A 72 SNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIY 151 (464)
T ss_dssp CSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred hcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceE
Confidence 01 145667777888888998 99999999985 33 3555443346444
Q ss_pred EEecceEEEccCCCCCch
Q 045826 320 SIPYGMVVWSTGIGTRPV 337 (584)
Q Consensus 320 ~i~~D~vI~a~G~~~~p~ 337 (584)
++.+|.||+|+|....|.
T Consensus 152 ~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEESEEEECCCSSSSBC
T ss_pred EEEcCEEEECCCCCCCCc
Confidence 689999999999544443
No 173
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.09 E-value=1.6e-06 Score=91.89 Aligned_cols=95 Identities=22% Similarity=0.323 Sum_probs=67.3
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc--ccccH---------HHHHHHHHHHHhCC
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL--NMFDK---------RITASAEEKFKRDG 291 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--~~~~~---------~~~~~~~~~L~~~G 291 (584)
|+|||||||+.|+.+|..|++.. ++.+|+||++.+.+. |.+.. ++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 48999999999999999998764 358999999988642 21111 11111234566789
Q ss_pred cEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
|+++.+ +|++|+.+.-++.. ++|++ ++||.+|+|+|.+
T Consensus 71 v~~i~~-~v~~Id~~~~~V~~-~~g~~--i~YD~LViAtG~~ 108 (430)
T 3hyw_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGPK 108 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCCE
T ss_pred cEEEEe-EEEEEECCCCEEEE-CCCCE--EECCEEEEeCCCC
Confidence 999876 69999765422222 34775 9999999999954
No 174
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.08 E-value=7.5e-06 Score=81.32 Aligned_cols=90 Identities=8% Similarity=0.041 Sum_probs=70.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||+|+.|+.+|..|.+.| +|+++++.+. .+...+.+.+++.+++ ++...+..
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~------------------~~~~~~~~~l~~~gv~--i~~~~v~~ 198 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV------------------EPDADQHALLAARGVR--VETTRIRE 198 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC------------------CCCHHHHHHHHHTTCE--EECSCEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC------------------CCCHHHHHHHHHCCcE--EEcceeee
Confidence 3579999999999999999999888 9999987754 1234466778888855 45588999
Q ss_pred EecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
++.++ .|.+.++. ++++|.+|+|+|..|+..
T Consensus 199 i~~~~-~v~~~~g~----------~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 199 IAGHA-DVVLADGR----------SIALAGLFTQPKLRITVD 229 (297)
T ss_dssp EETTE-EEEETTSC----------EEEESEEEECCEEECCCS
T ss_pred eecCC-eEEeCCCC----------EEEEEEEEEccCcccCch
Confidence 98765 66665443 899999999999987643
No 175
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.08 E-value=1e-05 Score=82.06 Aligned_cols=97 Identities=15% Similarity=0.178 Sum_probs=73.9
Q ss_pred hccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCc----cc------------cccc-----cHH
Q 045826 220 KKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGD----HI------------LNMF-----DKR 278 (584)
Q Consensus 220 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~----~i------------l~~~-----~~~ 278 (584)
....+|+|||||+.|+.+|..|++.+ .+|+|+++.+ .+ .|.+ ..+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 85 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAE--------------IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSE 85 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHH
Confidence 34569999999999999999999864 7899999843 11 1222 357
Q ss_pred HHHHHHHHHHhCCcEEEeCCceeEEcCC--eEEEEeC--CCCeEEEEecceEEEccCCC
Q 045826 279 ITASAEEKFKRDGIDLKTGSMVVKLSDK--EISTKDR--ATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 279 ~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~--~~G~~~~i~~D~vI~a~G~~ 333 (584)
+.+++.+.+++.|++++.++ |++++.+ .+.+... .++.. +.+|.+|+|+|..
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~--~~~d~vvlAtG~~ 141 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEP--VTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCC--EEEEEEEECCCEE
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcE--EEeCEEEECcCCC
Confidence 88888999999999999998 9888643 4555432 23454 8999999999964
No 176
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.08 E-value=6.7e-06 Score=87.90 Aligned_cols=105 Identities=20% Similarity=0.252 Sum_probs=75.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- . ...++...+.+.+++.|+++ +...+|..+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~i 238 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-----N------EDADVSKEIEKQFKKLGVTI-LTATKVESI 238 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHHTCEE-ECSCEEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-----c------cCHHHHHHHHHHHHHcCCEE-EeCcEEEEE
Confidence 57999999999999999999999999999999875321 1 12245566778888888665 235688888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+.+++.+.+.... +.+..++++|.+|+|+|..|+...
T Consensus 239 ~~~~~~~~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 239 ADGGSQVTVTVTK-----DGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EECSSCEEEEEES-----SSCEEEEEESEEEECSCEEECCSS
T ss_pred EEcCCeEEEEEEc-----CCceEEEEcCEEEECCCCCccCCC
Confidence 7665433333110 001237999999999999987643
No 177
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=9.2e-06 Score=87.71 Aligned_cols=99 Identities=17% Similarity=0.313 Sum_probs=73.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+...- . ...++...+.+.+++.|+++ +...+|..|
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~gv~i-~~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-----K------FDESVINVLENDMKKNNINI-VTFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-----T------SCHHHHHHHHHHHHHTTCEE-ECSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-----c------cchhhHHHHHHHHHhCCCEE-EECCEEEEE
Confidence 57999999999999999999999999999999875321 1 12245566778888888665 235678888
Q ss_pred ecCC-C--EEEEeecCccCCCCCceEE-EeCCEEEEccCCCCCCC
Q 045826 137 DAEK-K--QIYCRTTEDRTCGGKEEFA-LDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~-~--~v~~~~~~~~~~~~~~~~~-i~yD~LVlAtGs~~~~~ 177 (584)
+.+. + .+.+.++. + +++|.+|+|+|..|+..
T Consensus 244 ~~~~~~~~~v~~~~g~----------~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGR----------IYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp EESSTTCEEEEETTSC----------EEEEESEEEECCCBCCTTT
T ss_pred EEcCCceEEEEECCCc----------EEEECCEEEECCCCCcCCC
Confidence 7643 2 34443321 4 89999999999998753
No 178
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.08 E-value=5.2e-06 Score=91.34 Aligned_cols=38 Identities=26% Similarity=0.334 Sum_probs=33.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccC------CCeEEEEcCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSN------SFEVQVVSPRNYFA 93 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~------g~~V~lid~~~~~~ 93 (584)
..+||||||||+||+++|..|++. |++|+|||+.+..+
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 347999999999999999999987 99999999987654
No 179
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.07 E-value=6.4e-06 Score=89.48 Aligned_cols=102 Identities=14% Similarity=0.187 Sum_probs=77.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
-+++++|||||+.|+.+|..+++.|.+|||+++...+ +. ...++...+...+++.++.+ +....+..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L------~~------~D~ei~~~l~~~l~~~gi~~-~~~~~v~~ 288 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL------RG------FDQQCAVKVKLYMEEQGVMF-KNGILPKK 288 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS------TT------SCHHHHHHHHHHHHHTTCEE-EETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc------cc------cchhHHHHHHHHHHhhccee-ecceEEEE
Confidence 4689999999999999999999999999999875321 11 12356777888899999665 34567788
Q ss_pred EecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 136 IDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 136 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+...+..+.+....+ ..+.+|.|++|+|.+|+...
T Consensus 289 ~~~~~~~~~v~~~~~--------~~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 289 LTKMDDKILVEFSDK--------TSELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp EEEETTEEEEEETTS--------CEEEESEEEECSCEEESCGG
T ss_pred EEecCCeEEEEEcCC--------CeEEEEEEEEcccccCCccc
Confidence 877777776654432 27789999999999988653
No 180
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.07 E-value=5.1e-06 Score=88.91 Aligned_cols=106 Identities=22% Similarity=0.319 Sum_probs=76.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. ...++...+.+.+++.|+++ +...+|..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-----------~~~~~~~~l~~~l~~~gv~i-~~~~~v~~ 243 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-----------MDAEIRKQFQRSLEKQGMKF-KLKTKVVG 243 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------SCHHHHHHHHHHHHHSSCCE-ECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------ccHHHHHHHHHHHHHcCCEE-EeCCEEEE
Confidence 3579999999999999999999999999999998753210 12245566778888888765 34678999
Q ss_pred EecCCCE--EEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 136 IDAEKKQ--IYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 136 id~~~~~--v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
++.+++. +.+.+.. ++ +..++++|.+|+|+|..|+...
T Consensus 244 i~~~~~~~~v~~~~~~----~g-~~~~~~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSA----GG-EQTIIEADVVLVSAGRTPFTSG 283 (470)
T ss_dssp EECSSSSEEEEEEESS----SC-CCEEEEESEEECCCCEEECCTT
T ss_pred EEEcCCeEEEEEEecC----CC-cceEEECCEEEECCCCCcCCCC
Confidence 9876543 3333210 01 1137999999999999987643
No 181
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.07 E-value=1.3e-05 Score=84.25 Aligned_cols=95 Identities=16% Similarity=0.247 Sum_probs=72.8
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-----------------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM----------------------------- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~----------------------------- 274 (584)
.|+|||||++|+.+|..+++.+ .+|+|+++.+.+...
T Consensus 29 dViIIGgG~AGl~aA~~La~~G--------------~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKRG--------------RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 8999999999999999999864 789999887643100
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCe
Q 045826 275 -----------------------------------FDKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQ 317 (584)
Q Consensus 275 -----------------------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~ 317 (584)
....+.+.+.+.+++.||+++++++|+++. ++++.+.. .+|
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~-~~g- 172 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTT-SAG- 172 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTE-
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCc-
Confidence 012556677788888999999999999984 45566554 334
Q ss_pred EEEEecceEEEccCCCCCc
Q 045826 318 ISSIPYGMVVWSTGIGTRP 336 (584)
Q Consensus 318 ~~~i~~D~vI~a~G~~~~p 336 (584)
. +.+|.||+|+|..+.|
T Consensus 173 ~--i~ad~VIlAtG~~S~p 189 (417)
T 3v76_A 173 T--VDAASLVVASGGKSIP 189 (417)
T ss_dssp E--EEESEEEECCCCSSCG
T ss_pred E--EEeeEEEECCCCccCC
Confidence 3 9999999999976544
No 182
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=4.4e-06 Score=86.48 Aligned_cols=92 Identities=14% Similarity=0.354 Sum_probs=70.3
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEE-EEEEEEE
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFK-EAECYKI 136 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~-~~~v~~i 136 (584)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ...++...+.+.+++.| ++++ ..+|..+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------~~~~~~~~l~~~l~~~g--V~i~~~~~v~~i 209 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------LDEELSNMIKDMLEETG--VKFFLNSELLEA 209 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------------CCHHHHHHHHHHHHHTT--EEEECSCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------------CCHHHHHHHHHHHHHCC--CEEEcCCEEEEE
Confidence 7999999999999999999999999999999875321 12245566778888888 4444 4578888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+. ..+.+.++ ++++|.+|+|+|..|+.
T Consensus 210 ~~--~~v~~~~g-----------~i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 210 NE--EGVLTNSG-----------FIEGKVKICAIGIVPNV 236 (367)
T ss_dssp CS--SEEEETTE-----------EEECSCEEEECCEEECC
T ss_pred Ee--eEEEECCC-----------EEEcCEEEECcCCCcCH
Confidence 73 35655421 38999999999998763
No 183
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.06 E-value=1.6e-05 Score=87.18 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=34.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF 94 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~ 94 (584)
..++|+|||+|++|+++|..|++.|++|+|+|+.+..++
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~ 163 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGG 163 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCc
Confidence 356999999999999999999999999999999876543
No 184
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.06 E-value=2e-06 Score=90.28 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~ 90 (584)
.+||||||||++|+++|+.|++. |++|+|||+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 47999999999999999999988 99999999875
No 185
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.06 E-value=1.4e-05 Score=86.61 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=34.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFA 93 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~ 93 (584)
...||||||||+||+++|..|++.|++|+||||.+..+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~G 77 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWG 77 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 45799999999999999999999999999999987654
No 186
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.05 E-value=3.9e-06 Score=87.76 Aligned_cols=97 Identities=21% Similarity=0.281 Sum_probs=67.8
Q ss_pred cceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-ccHHH---------HHHHHHHHHhCC
Q 045826 222 ILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-FDKRI---------TASAEEKFKRDG 291 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-~~~~~---------~~~~~~~L~~~G 291 (584)
+|+|+|||||+.|+.+|..|.+.+ .+.+|+||++.+..... +...+ ...-.+.+.+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 679999999999999999998764 34799999988753211 11111 011124566789
Q ss_pred cEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
|+++.+ +|++|+.+.-.+.. .+|++ +.+|.+|+|+|..+
T Consensus 70 v~~i~~-~v~~id~~~~~v~~-~~g~~--i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 70 IQVVHD-SALGIDPDKKLVKT-AGGAE--FAYDRCVVAPGIDL 108 (401)
T ss_dssp CEEECS-CEEEEETTTTEEEE-TTSCE--EECSEEEECCCEEE
T ss_pred CEEEEe-EEEEEEccCcEEEe-cccce--eecceeeeccCCcc
Confidence 999876 68999765533332 34765 99999999999543
No 187
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.05 E-value=9.2e-06 Score=87.48 Aligned_cols=100 Identities=18% Similarity=0.317 Sum_probs=74.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+... ....++...+.+.+++.|+++ +...+|+.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i-~~~~~v~~ 261 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG----------YYDRDLTDLMAKNMEEHGIQL-AFGETVKE 261 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHTTTCEE-EETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh----------HHHHHHHHHHHHHHHhCCeEE-EeCCEEEE
Confidence 4689999999999999999999999999999998753221 012245566778888888665 23567888
Q ss_pred EecCCC--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEKK--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
++.+++ .+.+ ++ .++++|.||+|+|.+|+..
T Consensus 262 i~~~~~v~~v~~-~g----------~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 262 VAGNGKVEKIIT-DK----------NEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EECSSSCCEEEE-SS----------CEEECSEEEECCCEEECCG
T ss_pred EEcCCcEEEEEE-CC----------cEEECCEEEECCCCCcChH
Confidence 876543 2333 22 1799999999999988754
No 188
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.05 E-value=7.9e-06 Score=85.65 Aligned_cols=99 Identities=24% Similarity=0.367 Sum_probs=73.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .....+...+.+.+++.|+++. ....|..+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 210 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR----------VVTPEISSYFHDRHSGAGIRMH-YGVRATEI 210 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------TSCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh----------ccCHHHHHHHHHHHHhCCcEEE-ECCEEEEE
Confidence 578999999999999999999999999999998754321 1123455667788888885542 25578888
Q ss_pred ecCCCE---EEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKKQ---IYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~~---v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
..++.. |.+.++. ++++|.+|+|+|..|+.
T Consensus 211 ~~~~~~v~~V~~~dG~----------~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 211 AAEGDRVTGVVLSDGN----------TLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEETTEEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECcCCccCH
Confidence 776543 3343332 89999999999998764
No 189
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.05 E-value=9e-06 Score=87.81 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 5799999999999999999999999999999975
No 190
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.05 E-value=9.4e-06 Score=85.89 Aligned_cols=99 Identities=18% Similarity=0.366 Sum_probs=72.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+..... ....++...+.+.+++.|+++. ...+|..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 217 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER----------VTAPPVSAFYEHLHREAGVDIR-TGTQVCGF 217 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------TSCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------hhhHHHHHHHHHHHHhCCeEEE-eCCEEEEE
Confidence 579999999999999999999999999999988653211 1122445567778888886552 35578888
Q ss_pred ec--CC-C--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DA--EK-K--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~--~~-~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+. ++ + .|.+.++. .+.+|.+|+|+|..|+.
T Consensus 218 ~~~~~~~~v~~v~~~~G~----------~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 218 EMSTDQQKVTAVLCEDGT----------RLPADLVIAGIGLIPNC 252 (431)
T ss_dssp EECTTTCCEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EeccCCCcEEEEEeCCCC----------EEEcCEEEECCCCCcCc
Confidence 76 33 3 34443322 79999999999998764
No 191
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.05 E-value=7.1e-06 Score=88.13 Aligned_cols=101 Identities=15% Similarity=0.239 Sum_probs=74.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. ....++...+.+.+++.|+++ +...+|..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------~~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 252 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-----------IYDGDMAEYIYKEADKHHIEI-LTNENVKA 252 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-----------SSCHHHHHHHHHHHHHTTCEE-ECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-----------cCCHHHHHHHHHHHHHcCcEE-EcCCEEEE
Confidence 468999999999999999999999999999999865322 012345566778888888654 23567888
Q ss_pred EecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
++.+++...+.... .++++|.||+|+|..|+..
T Consensus 253 i~~~~~v~~v~~~~---------~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 253 FKGNERVEAVETDK---------GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEESSBEEEEEETT---------EEEECSEEEECSCEEESCG
T ss_pred EEcCCcEEEEEECC---------CEEEcCEEEECcCCCcChH
Confidence 87765432222211 2799999999999988754
No 192
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.04 E-value=5e-06 Score=89.38 Aligned_cols=102 Identities=14% Similarity=0.180 Sum_probs=73.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEE-EEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFK-EAECYK 135 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~-~~~v~~ 135 (584)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+.-. ...++...+.+.+++.| ++++ ..+|..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~g--V~i~~~~~v~~ 251 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-----------ADRDLVKVWQKQNEYRF--DNIMVNTKTVA 251 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------SCHHHHHHHHHHHGGGE--EEEECSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------cCHHHHHHHHHHHHhcC--CEEEECCEEEE
Confidence 579999999999999999999999999999998753311 12245566778888887 4444 458888
Q ss_pred EecCCCE--EEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEKKQ--IYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~~~--v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
++.+++. +.+.+..+ +. .++.+|.+|+|+|..|+..
T Consensus 252 i~~~~~~~~v~~~~~~~----~g--~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGANA----PK--EPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EEEETTEEEEEEESSSC----CS--SCEEESCEEECCCEEECGG
T ss_pred EEEcCCeEEEEEeccCC----Cc--eEEEcCEEEECcCCCcCCC
Confidence 8766544 44433000 01 1688999999999998753
No 193
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.04 E-value=1.6e-05 Score=80.59 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=72.1
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc---------------cc----ccHHHHHHH
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL---------------NM----FDKRITASA 283 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------~~----~~~~~~~~~ 283 (584)
.+|+|||||+.|+.+|..|++.+ .+|+|+++.+.+. +. ....+.+++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRG--------------LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 38999999999999999998743 7899999876431 11 125667778
Q ss_pred HHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCC
Q 045826 284 EEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 284 ~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
.+.+++.+++++.+++|+.++. +.+.+.. .+|+. +.+|.||+|+|.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~-~~g~~--~~~~~lv~AtG~ 119 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTT-SQGNA--YTAKAVIIAAGV 119 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCTT
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEE-CCCCE--EEeCEEEECCCC
Confidence 8888888999999999999864 3454543 34654 899999999996
No 194
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.03 E-value=8.2e-06 Score=89.94 Aligned_cols=98 Identities=15% Similarity=0.331 Sum_probs=76.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. ...++...+.+.+++.|+++ +....|..+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~GV~i-~~~~~v~~i 254 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-----------IDYEMAAYVHEHMKNHDVEL-VFEDGVDAL 254 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------SCHHHHHHHHHHHHHTTCEE-ECSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----------CCHHHHHHHHHHHHHcCCEE-EECCeEEEE
Confidence 579999999999999999999999999999988743221 12245566778888888654 235688999
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+.+.+.|.+.++. ++.+|.+|+|+|..|+.
T Consensus 255 ~~~~~~v~~~~g~----------~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 255 EENGAVVRLKSGS----------VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EGGGTEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred ecCCCEEEECCCC----------EEEcCEEEEccCCCCCh
Confidence 8876777775543 89999999999998875
No 195
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.03 E-value=1.6e-05 Score=84.70 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=75.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|+++ +....|+.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~d~~~~~~l~~~l~~~GV~i-~~~~~v~~i 215 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK----------YFDKEMVAEVQKSLEKQAVIF-HFEETVLGI 215 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TCCHHHHHHHHHHHHTTTEEE-EETCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc----------cCCHHHHHHHHHHHHHcCCEE-EeCCEEEEE
Confidence 579999999999999999999999999999998754321 012345666788888888443 234678888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNT 179 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~i 179 (584)
+..+..+.+.... + ++++|.+|+|+|.+|+....
T Consensus 216 ~~~~~~v~v~~~~-------g--~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 216 EETANGIVLETSE-------Q--EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp EECSSCEEEEESS-------C--EEEESEEEECSCCBCCCSSC
T ss_pred EccCCeEEEEECC-------C--EEEeCEEEECcCCCCChHHH
Confidence 8544444443321 1 79999999999999876543
No 196
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.03 E-value=1.7e-05 Score=79.60 Aligned_cols=93 Identities=12% Similarity=0.202 Sum_probs=71.6
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCC--ccc--------ccc----ccHHHHHHHHHHHH
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAG--DHI--------LNM----FDKRITASAEEKFK 288 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~--~~i--------l~~----~~~~~~~~~~~~L~ 288 (584)
.+|+|||||+.|+.+|..|++.+ .+|+|+++. ..+ .|. ...++.+++.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYM--------------LKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHCC--------------CcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 48999999999999999998854 789999985 111 122 23577788888899
Q ss_pred hCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 289 RDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 289 ~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
+.|++++. ++|++++.+ .+.+.. .+|+. +.+|.+|+|+|..
T Consensus 82 ~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 82 KYEVPVLL-DIVEKIENRGDEFVVKT-KRKGE--FKADSVILGIGVK 124 (323)
T ss_dssp TTTCCEEE-SCEEEEEEC--CEEEEE-SSSCE--EEEEEEEECCCCE
T ss_pred HcCCEEEE-EEEEEEEecCCEEEEEE-CCCCE--EEcCEEEECcCCC
Confidence 99999999 899998644 444443 33554 9999999999964
No 197
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.02 E-value=1.4e-05 Score=84.96 Aligned_cols=101 Identities=13% Similarity=0.337 Sum_probs=74.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.+++.|+++ +...+|+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 217 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK----------YFDKEFTDILAKDYEAHGVNL-VLGSKVAAF 217 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHHTTCEE-EESSCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh----------hhhhhHHHHHHHHHHHCCCEE-EcCCeeEEE
Confidence 579999999999999999999999999999998753221 112245566778888888665 335678888
Q ss_pred ecCCCEEE-EeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEKKQIY-CRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.++..+. +.. + + .++.+|.+|+|+|.+|+..
T Consensus 218 ~~~~~~v~~v~~-~-----g---~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 218 EEVDDEIITKTL-D-----G---KEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEETTEEEEEET-T-----S---CEEEESEEEECCCEEECCG
T ss_pred EcCCCeEEEEEe-C-----C---CEEECCEEEECcCCCCCHH
Confidence 76444443 221 1 1 2799999999999998754
No 198
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.02 E-value=1.1e-05 Score=86.16 Aligned_cols=102 Identities=20% Similarity=0.353 Sum_probs=73.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.... . . ..++...+.+.+++.++++ +...+|..+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----~-----~-~~~~~~~l~~~l~~~gv~i-~~~~~v~~i 233 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----Q-----F-DPLLSATLAENMHAQGIET-HLEFAVAAL 233 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----S-CHHHHHHHHHHHHHTTCEE-ESSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----c-----c-CHHHHHHHHHHHHHCCCEE-EeCCEEEEE
Confidence 57999999999999999999999999999999865331 0 1 1234556777788888654 235578888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.++..+.+...+ +. . ++++|.||+|+|..|+..
T Consensus 234 ~~~~~~~~v~~~~-----G~-~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 234 ERDAQGTTLVAQD-----GT-R-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EEETTEEEEEETT-----CC-E-EEEESEEEECSCEEESCT
T ss_pred EEeCCeEEEEEeC-----Cc-E-EEEcCEEEECCCCCcCCC
Confidence 7654434333221 11 1 689999999999998764
No 199
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.02 E-value=1.2e-05 Score=87.72 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhccc---CCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKS---NSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~---~g~~V~lid~~~ 90 (584)
.+++|||||||++|+++|..|++ .|++|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 35799999999999999999998 999999999865
No 200
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.02 E-value=8e-06 Score=87.67 Aligned_cols=99 Identities=22% Similarity=0.316 Sum_probs=73.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+...- . ...++...+.+.+++.|+++ +...+|..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 252 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-----K------FDECIQNTITDHYVKEGINV-HKLSKIVKV 252 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T------SCHHHHHHHHHHHHHHTCEE-ECSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-----c------cCHHHHHHHHHHHHhCCeEE-EeCCEEEEE
Confidence 57999999999999999999999999999999875321 1 12245556778888888665 235578888
Q ss_pred ecCCC----EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DAEKK----QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+.+.. .|.+.++ . ..+.+|.+|+|+|.+|+.
T Consensus 253 ~~~~~~~~~~v~~~~G-------~--~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 253 EKNVETDKLKIHMNDS-------K--SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EECC-CCCEEEEETTS-------C--EEEEESEEEECSCEEECC
T ss_pred EEcCCCcEEEEEECCC-------c--EEEEcCEEEECCCCCCcc
Confidence 76432 3444322 0 279999999999999876
No 201
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.02 E-value=5.5e-06 Score=86.92 Aligned_cols=99 Identities=17% Similarity=0.243 Sum_probs=71.6
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc--c---------ccHHHHHHHHHHHHhCC
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN--M---------FDKRITASAEEKFKRDG 291 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--~---------~~~~~~~~~~~~L~~~G 291 (584)
++|+|||||++|+++|..|++... .+.+|+|+++.+.+.- . ...++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~-----------~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG-----------SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG-----------GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC-----------CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 389999999999999999988211 2479999999886521 1 11223344567777889
Q ss_pred cEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 292 IDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 292 V~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
|+++.+ +|++++.+ .+++.+. +++..++.+|.||+|+|..+
T Consensus 71 v~~~~~-~v~~i~~~~~~V~~~~g-~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 71 IQFQEG-TVEKIDAKSSMVYYTKP-DGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp CEEEEC-EEEEEETTTTEEEEECT-TSCEEEEECSEEEECCCCEE
T ss_pred eEEEEe-eEEEEeCCCCEEEEccC-CcccceeeCCEEEECCCCCc
Confidence 999988 89999755 5666652 23334689999999999644
No 202
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.02 E-value=1.2e-05 Score=81.80 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=33.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFA 93 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~ 93 (584)
.+||+|||||++|+++|..|++. |++|+|||+++..+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 57999999999999999999975 99999999987655
No 203
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.01 E-value=1.1e-05 Score=86.41 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=74.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHH-HHcCCcEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIV-RKKGMDIQFKEAECY 134 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~-~~~g~~v~~~~~~v~ 134 (584)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+ ++.|+++ +...+|.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~~gv~i-~~~~~v~ 240 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-----T------LDEDVTNALVGALAKNEKMKF-MTSTKVV 240 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHHTCCEE-ECSCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-----c------CCHHHHHHHHHHHhhcCCcEE-EeCCEEE
Confidence 357999999999999999999999999999999875321 1 1224556677888 8888654 2356888
Q ss_pred EEecCCC--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 135 KIDAEKK--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 135 ~id~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
.++.+++ .+.+...+ + +..++++|.+|+|+|..|+..
T Consensus 241 ~i~~~~~~~~v~~~~~~-----g-~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 241 GGTNNGDSVSLEVEGKN-----G-KRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEEECSSSEEEEEECC---------EEEEEESEEEECSCEEECCT
T ss_pred EEEEcCCeEEEEEEcCC-----C-ceEEEECCEEEECCCcccCCC
Confidence 8887654 33333101 1 113799999999999998764
No 204
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.01 E-value=2.2e-05 Score=80.77 Aligned_cols=94 Identities=17% Similarity=0.246 Sum_probs=70.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCc-EEEEecCCcccc--------------c-------c-------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFT-RITLLEAGDHIL--------------N-------M------- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~il--------------~-------~------- 274 (584)
+|+|||||++|+.+|..|++.+ . +|+|+++.+ +. + .
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~g--------------~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 70 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDFG--------------ITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAI 70 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCS
T ss_pred cEEEECcCHHHHHHHHHHHHcC--------------CCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhc
Confidence 8999999999999999998754 5 899999875 10 0 0
Q ss_pred ---------------ccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC--eEEEEeCCCCeEEEEecceEEEccCCCCCc
Q 045826 275 ---------------FDKRITASAEEKFKRDGIDLKTGSMVVKLSDK--EISTKDRATGQISSIPYGMVVWSTGIGTRP 336 (584)
Q Consensus 275 ---------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p 336 (584)
....+..++.+.+++.|++++.+++|++++.+ +..+.. .+|+ +.+|.||+|+|..+.|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~---~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 71 SMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT-TTET---YHADYIFVATGDYNFP 145 (369)
T ss_dssp STTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCC---EEEEEEEECCCSTTSB
T ss_pred cccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEe-CCCE---EEeCEEEECCCCCCcc
Confidence 01345666777888899999999999998643 455544 2343 8999999999965544
No 205
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.00 E-value=7.9e-06 Score=86.59 Aligned_cols=96 Identities=20% Similarity=0.299 Sum_probs=69.3
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc--cccc---------cHHHHHHHHHHHHhCC
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI--LNMF---------DKRITASAEEKFKRDG 291 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i--l~~~---------~~~~~~~~~~~L~~~G 291 (584)
++|+|||||+.|+++|..|++... .+.+|+|+++.+.+ .|.+ ..++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 489999999999999999988321 24899999999865 2211 1223333567778899
Q ss_pred cEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
|+++. .+|++++.+.-.+.. ++|++ +.+|.+|+|+|..
T Consensus 74 v~~~~-~~v~~id~~~~~V~~-~~g~~--i~~d~lviAtG~~ 111 (437)
T 3sx6_A 74 IHFIA-QSAEQIDAEAQNITL-ADGNT--VHYDYLMIATGPK 111 (437)
T ss_dssp CEEEC-SCEEEEETTTTEEEE-TTSCE--EECSEEEECCCCE
T ss_pred CEEEE-eEEEEEEcCCCEEEE-CCCCE--EECCEEEECCCCC
Confidence 99985 689999765322222 23665 9999999999953
No 206
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.00 E-value=1e-05 Score=87.16 Aligned_cols=99 Identities=18% Similarity=0.334 Sum_probs=73.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccC---CCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN---SFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~---g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
.++|+|||||+.|+.+|..|++. |.+|+||++.+.+.- . ...++...+.+.+++.|+++ +...+|
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~GV~i-~~~~~v 258 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-----G------FDETIREEVTKQLTANGIEI-MTNENP 258 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-----T------SCHHHHHHHHHHHHHTTCEE-EESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-----c------cCHHHHHHHHHHHHhCCCEE-EeCCEE
Confidence 57999999999999999999977 999999999875331 1 12245566778888888665 235678
Q ss_pred EEEecCC-C--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 134 YKIDAEK-K--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 134 ~~id~~~-~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
..++.++ + .|.+.++. ++++|.+|+|+|.+|+..
T Consensus 259 ~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 259 AKVSLNTDGSKHVTFESGK----------TLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEECCG
T ss_pred EEEEEcCCceEEEEECCCc----------EEEcCEEEECCCCccccc
Confidence 8887653 2 34443322 799999999999988753
No 207
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.99 E-value=2.3e-05 Score=80.54 Aligned_cols=93 Identities=19% Similarity=0.225 Sum_probs=72.5
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc---------------cc----ccHHHHHHH
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL---------------NM----FDKRITASA 283 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---------------~~----~~~~~~~~~ 283 (584)
.+|+|||||+.|+.+|..|++.+ .+|+|+++.+.+. +. ....+.+.+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNN--------------ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESL 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHH
Confidence 48999999999999999998743 7999999876431 11 125677788
Q ss_pred HHHHHhCCcEEEeCCceeEEcC--C-eEEEEeCCCCeEEEEecceEEEccCC
Q 045826 284 EEKFKRDGIDLKTGSMVVKLSD--K-EISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 284 ~~~L~~~GV~v~~~~~V~~v~~--~-~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
.+.+++.|++++.+++|+.++. + .+.+.. .+|+. +.+|.||+|+|.
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~~--~~~~~li~AtG~ 129 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRT-NTGNV--YRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEEEEEEECCTT
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEE-CCCcE--EEeeEEEEccCC
Confidence 8888889999999999999863 2 344443 34654 999999999996
No 208
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.99 E-value=1.5e-05 Score=80.16 Aligned_cols=102 Identities=21% Similarity=0.289 Sum_probs=72.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEE-EEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFK-EAECYK 135 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~-~~~v~~ 135 (584)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. ...+...+.+.+++.+ ++++ ..++..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~~~~~~~l~~~l~~~g--v~i~~~~~v~~ 209 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------------EKILIKRLMDKVENGN--IILHTNRTLEE 209 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------CHHHHHHHHHHHHTSS--EEEECSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------CHHHHHHHHHhcccCC--eEEEcCceeEE
Confidence 57999999999999999999999999999999875421 1123344556666677 5454 568888
Q ss_pred EecCC-CE--EEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEK-KQ--IYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~-~~--v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
++.+. +. |.+.+... ..+..++++|.+|+|+|..|+..
T Consensus 210 i~~~~~~v~~v~~~~~~~----~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 210 VTGDQMGVTGVRLRDTQN----SDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EEECSSSEEEEEEECCTT----CCCCEEEECSEEEECSCEEESCG
T ss_pred EEcCCCceEEEEEEeccC----CCceEEEEcCEEEEEeCCCCChH
Confidence 88765 22 55554210 01124799999999999988754
No 209
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.98 E-value=9.9e-06 Score=87.22 Aligned_cols=99 Identities=14% Similarity=0.309 Sum_probs=73.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccC---CCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN---SFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~---g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
.++|+|||||+.|+.+|..|++. |.+|+||++.+.+.- . ...++...+.+.+++.|+++ +...+|
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~GV~i-~~~~~v 254 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-----G------FDSELRKQLTEQLRANGINV-RTHENP 254 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-----T------SCHHHHHHHHHHHHHTTEEE-EETCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-----c------cCHHHHHHHHHHHHhCCCEE-EeCCEE
Confidence 57999999999999999999977 999999999875321 1 12245566778888888444 235578
Q ss_pred EEEecCCC---EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 134 YKIDAEKK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 134 ~~id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
..++.++. .|.+.++. ++.+|.||+|+|..|+..
T Consensus 255 ~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 255 AKVTKNADGTRHVVFESGA----------EADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEEEEcCCCEEEEEECCCc----------EEEcCEEEEccCCCcCcc
Confidence 88876542 34433221 799999999999998764
No 210
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.97 E-value=3.2e-05 Score=77.43 Aligned_cols=96 Identities=16% Similarity=0.219 Sum_probs=69.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHH-cCCcEEEE-EEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRK-KGMDIQFK-EAECY 134 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~-~g~~v~~~-~~~v~ 134 (584)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+.+. ..+.+.+.+ .+ ++++ ..++.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----------------~~~~~~l~~~~g--v~v~~~~~v~ 204 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKAD-----------------QVLQDKLRSLKN--VDIILNAQTT 204 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSC-----------------HHHHHHHHTCTT--EEEESSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCcc-----------------HHHHHHHhhCCC--eEEecCCceE
Confidence 579999999999999999999999999999998754210 223444554 46 4444 56788
Q ss_pred EEecCCC---EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 135 KIDAEKK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 135 ~id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
.++.++. .+.+.+.. +.+...+.+|.+|+|+|..|+.
T Consensus 205 ~i~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~ 244 (310)
T 1fl2_A 205 EVKGDGSKVVGLEYRDRV-----SGDIHNIELAGIFVQIGLLPNT 244 (310)
T ss_dssp EEEESSSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESC
T ss_pred EEEcCCCcEEEEEEEECC-----CCcEEEEEcCEEEEeeCCccCc
Confidence 8876643 35555421 1123479999999999998764
No 211
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.97 E-value=1.1e-05 Score=87.08 Aligned_cols=101 Identities=17% Similarity=0.296 Sum_probs=76.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+++.|+++ +....|+.|
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~GV~i-~~~~~V~~i 249 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-----Y------EDADAALVLEESFAERGVRL-FKNARAASV 249 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-----C------SSHHHHHHHHHHHHHTTCEE-ETTCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-----c------cCHHHHHHHHHHHHHCCCEE-EeCCEEEEE
Confidence 57999999999999999999999999999999875321 0 12245666788888888654 235678888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.+++.+.+...++ .++.+|.+|+|+|.+|+..
T Consensus 250 ~~~~~~v~v~~~~g--------~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 250 TRTGAGVLVTMTDG--------RTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp EECSSSEEEEETTS--------CEEEESEEEECCCEEECCS
T ss_pred EEeCCEEEEEECCC--------cEEEcCEEEECCCCCcCCC
Confidence 87654455543321 2799999999999998764
No 212
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.96 E-value=9.5e-05 Score=81.51 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHHHhCC-cEEEeCCceeEEc--CCe---EEEEeCCCCeEEEEecceEEEccCC
Q 045826 276 DKRITASAEEKFKRDG-IDLKTGSMVVKLS--DKE---ISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~G-V~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
...+...+.+.+++.| |+++.++.++++. ++. +...+..+|+...+.++.||+|+|.
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 3566777778888888 9999999999984 343 4444445687556999999999995
No 213
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.95 E-value=2.3e-05 Score=83.98 Aligned_cols=103 Identities=22% Similarity=0.307 Sum_probs=75.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ...++...+.+.+++.|+++ +...+|..
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~Gv~v-~~~~~v~~ 246 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-----------VDEQVAKEAQKILTKQGLKI-LLGARVTG 246 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------SCHHHHHHHHHHHHHTTEEE-EETCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-----------cCHHHHHHHHHHHHhCCCEE-EECCEEEE
Confidence 3579999999999999999999999999999998753221 12345666778888888443 23568888
Q ss_pred EecCCCEE--EEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEKKQI--YCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~~~v--~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
++.+++.+ .+.++. +...+.+|.+|+|+|..|+..
T Consensus 247 i~~~~~~~~v~~~~~~-------g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 247 TEVKNKQVTVKFVDAE-------GEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEECSSCEEEEEESSS-------EEEEEEESEEEECSCEEECCT
T ss_pred EEEcCCEEEEEEEeCC-------CcEEEECCEEEEeeCCcccCC
Confidence 88665544 333321 123799999999999988764
No 214
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.95 E-value=1.1e-05 Score=84.12 Aligned_cols=94 Identities=16% Similarity=0.315 Sum_probs=68.3
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc---ccccHHH---------HHHHHHHHHhC
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL---NMFDKRI---------TASAEEKFKRD 290 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il---~~~~~~~---------~~~~~~~L~~~ 290 (584)
-+|+|||||+.|+.+|..|.. .+.+|+|+++.+.+. +.++..+ .....+.+++.
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~--------------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~ 75 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALG--------------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKN 75 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTT--------------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHT
T ss_pred CCEEEEcCcHHHHHHHHHHhC--------------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHC
Confidence 389999999999999999932 358999999987642 2222111 12234667889
Q ss_pred CcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 291 GIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 291 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
||+++++++|++++.+.-.+.. .+|++ +.+|.+|+|||.+
T Consensus 76 ~i~~~~~~~V~~id~~~~~v~~-~~g~~--~~yd~lvlAtG~~ 115 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKLVTL-KSGEK--IKYEKLIIASGSI 115 (385)
T ss_dssp TCEEECSCCEEEEETTTTEEEE-TTSCE--EECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCCEEEE-CCCCE--EECCEEEEecCCC
Confidence 9999999999999765423322 33765 9999999999953
No 215
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.95 E-value=1.5e-05 Score=85.23 Aligned_cols=99 Identities=19% Similarity=0.292 Sum_probs=74.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- ...++...+.+.+++.|+++ +...+|..+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~i 242 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------------EDPAIGEAVTAAFRAEGIEV-LEHTQASQV 242 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------------SCHHHHHHHHHHHHHTTCEE-ETTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------------CCHHHHHHHHHHHHhCCCEE-EcCCEEEEE
Confidence 57999999999999999999999999999999874321 01245666778888888554 235678888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.++..+.+.... .++++|.+|+|+|..|+..
T Consensus 243 ~~~~~~~~v~~~~---------~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 243 AHMDGEFVLTTTH---------GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EEETTEEEEEETT---------EEEEESEEEECSCEEESCT
T ss_pred EEeCCEEEEEECC---------cEEEcCEEEECCCCCcCCC
Confidence 7766654443221 2799999999999998754
No 216
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.94 E-value=6.9e-05 Score=81.54 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFA 93 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~ 93 (584)
..||||||||+||+++|..|++ |.+|+||||.+...
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 4799999999999999999999 99999999987543
No 217
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.94 E-value=5.1e-05 Score=76.41 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=70.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.. ...+.+.+.+.++++ +...++..+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~-----------------~~~l~~~l~~~gv~i-~~~~~v~~i 216 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC-----------------ENAYVQEIKKRNIPY-IMNAQVTEI 216 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-----------------CHHHHHHHHHTTCCE-ECSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-----------------CHHHHHHHhcCCcEE-EcCCeEEEE
Confidence 47899999999999999999999999999998875421 122444555778665 346788888
Q ss_pred ecCCC---EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEKK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+.++. .+.+.+.. +.+...+.+|.||+|+|..|+..
T Consensus 217 ~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 255 (319)
T 3cty_A 217 VGDGKKVTGVKYKDRT-----TGEEKLIETDGVFIYVGLIPQTS 255 (319)
T ss_dssp EESSSSEEEEEEEETT-----TCCEEEECCSEEEECCCEEECCG
T ss_pred ecCCceEEEEEEEEcC-----CCceEEEecCEEEEeeCCccChH
Confidence 87654 45554311 11124799999999999988753
No 218
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.94 E-value=0.00011 Score=81.71 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEc--CC---eEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLS--DK---EISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~---~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
..+...+.+.+.+.||+|+.++.|+++. ++ ++.+.+..+|+...+.++.||+|+|-.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 4566777788888899999999999983 34 344544456776568999999999943
No 219
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.94 E-value=9e-05 Score=81.80 Aligned_cols=58 Identities=14% Similarity=0.029 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCe---EEEEeCCCCeEEEEecceEEEccCCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKE---ISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
...+...+.+.+.+.||+|+.++.++++. ++. +.+.+..+|+...+.++.||+|+|-.
T Consensus 154 G~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 34667777788888999999999999984 343 44544356775569999999999953
No 220
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.94 E-value=2.1e-05 Score=84.68 Aligned_cols=106 Identities=18% Similarity=0.215 Sum_probs=77.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ...++...+.+.+++.|+++ +...+|..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~d~~~~~~l~~~l~~~gV~v-~~~~~v~~ 264 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-----------MDGEVAKQLQRMLTKQGIDF-KLGAKVTG 264 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-----------SCHHHHHHHHHHHHHTTCEE-ECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-----------CCHHHHHHHHHHHHhCCCEE-EECCeEEE
Confidence 3579999999999999999999999999999988754321 12345666778888888665 23567888
Q ss_pred EecCCCEEE--EeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 136 IDAEKKQIY--CRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 136 id~~~~~v~--~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+..+++.+. +.+.. +.+..++++|.||+|+|..|+...
T Consensus 265 i~~~~~~~~v~~~~~~-----~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 265 AVKSGDGAKVTFEPVK-----GGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEETTEEEEEEEETT-----SCCCEEEEESEEEECCCCEECCTT
T ss_pred EEEeCCEEEEEEEecC-----CCceEEEEcCEEEEeeCCccCCCc
Confidence 877665543 33311 011248999999999999887653
No 221
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.93 E-value=1.5e-05 Score=85.80 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=74.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ...++...+.+.+++. +++ +....|..+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~d~~~~~~l~~~l~~~-V~i-~~~~~v~~i 240 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-----------QDEEMKRYAEKTFNEE-FYF-DAKARVIST 240 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-----------CCHHHHHHHHHHHHTT-SEE-ETTCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------CCHHHHHHHHHHHhhC-cEE-EECCEEEEE
Confidence 579999999999999999999999999999998764311 1224455566667665 555 236678888
Q ss_pred ecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 137 DAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 137 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
..+++.+.+..... +.++.++++|.||+|+|..|+...
T Consensus 241 ~~~~~~v~v~~~~~----~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 241 IEKEDAVEVIYFDK----SGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EECSSSEEEEEECT----TCCEEEEEESEEEECSCCEESCSS
T ss_pred EEcCCEEEEEEEeC----CCceEEEECCEEEEeeCCccCCCC
Confidence 76655444432100 111248999999999999987654
No 222
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.93 E-value=2.5e-05 Score=85.51 Aligned_cols=100 Identities=16% Similarity=0.305 Sum_probs=72.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. ...++...+.+.+++.|+++. ....+..+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 218 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-----------VDREMAGFAHQAIRDQGVDLR-LGTALSEV 218 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-----------SCHHHHHHHHHHHHHTTCEEE-ETCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-----------cCHHHHHHHHHHHHHCCCEEE-eCCeEEEE
Confidence 469999999999999999999999999999998743210 122445567778888886652 35678888
Q ss_pred ec-------------------CCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DA-------------------EKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~-------------------~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
+. ....+.+...++ ..+++|.+|+|+|..|+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--------~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 219 SYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG--------ELLETDLLIMAIGVRPET 269 (565)
T ss_dssp EEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS--------CEEEESEEEECSCEEECC
T ss_pred eccccccccccccccccccccCCCcEEEEEcCC--------CEEEcCEEEECcCCccch
Confidence 76 344444433221 179999999999998864
No 223
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.92 E-value=0.00016 Score=79.22 Aligned_cols=57 Identities=21% Similarity=0.289 Sum_probs=42.3
Q ss_pred cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCe---EEEEeCCCCeEEEEecceEEEccCC
Q 045826 276 DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKE---ISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 276 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
+..+...+.+.+++.|++++++++|+++. ++. |.+.+..+|+..++.+|.||.|+|.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ 248 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGP 248 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCCh
Confidence 45666667788889999999999999984 333 4444433455445999999999993
No 224
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.92 E-value=2.6e-05 Score=82.86 Aligned_cols=97 Identities=21% Similarity=0.420 Sum_probs=68.3
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc------ccc------cHHHHHHHHHHH-Hh
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL------NMF------DKRITASAEEKF-KR 289 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------~~~------~~~~~~~~~~~L-~~ 289 (584)
++|+|||||+.|+.+|..|++.. ++.+|+++++.+.+. |.+ ...+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999998863 247999999988541 111 111122222334 67
Q ss_pred CCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 290 DGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.||+++++++|+.++.+...+.. .+|+ .++.+|.+|+|||..
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~-~~g~-~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRE-NGGE-KSYEWDYLVFANGAS 113 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEEC-SSSE-EEEECSEEEECCCEE
T ss_pred cCcEEEecCEEEEEecCCCEEEE-CCce-EEEEcCEEEECCCCC
Confidence 89999999999999888766654 3343 248999999999953
No 225
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.90 E-value=2.1e-05 Score=84.15 Aligned_cols=99 Identities=19% Similarity=0.346 Sum_probs=73.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccC-CCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN-SFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~-g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+.-. . ...++...+.+.+++.|+++ +...+|..
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~---------~-~~~~~~~~l~~~l~~~GV~i-~~~~~v~~ 227 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG---------F-TSKSLSQMLRHDLEKNDVVV-HTGEKVVR 227 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT---------T-SCHHHHHHHHHHHHHTTCEE-ECSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc---------c-cCHHHHHHHHHHHHhcCCEE-EeCCEEEE
Confidence 57999999999999999999988 9999999998643220 0 12345666778888888554 23457888
Q ss_pred EecCCCEE--EEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 136 IDAEKKQI--YCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 136 id~~~~~v--~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
++.++..+ .+.++. ++.+|.+|+|+|..|+.
T Consensus 228 i~~~~~~v~v~~~~g~----------~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 228 LEGENGKVARVITDKR----------TLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEESSSBEEEEEESSC----------EEECSEEEECSCEEECC
T ss_pred EEccCCeEEEEEeCCC----------EEEcCEEEECCCCCcCH
Confidence 88755543 333332 89999999999998764
No 226
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.90 E-value=5.1e-05 Score=79.36 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=71.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-----------------c------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN-----------------M------------ 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-----------------~------------ 274 (584)
.|+|||||++|+.+|..+++.+ .+|+|+++.+.+.. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~G--------------~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLG--------------KSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhCC--------------CCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 7999999999999999999864 67888887654310 0
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhCCcEEEeCCceeEEc------CCeEEEEeC
Q 045826 275 -----------------------------------FDKRITASAEEKFKRDGIDLKTGSMVVKLS------DKEISTKDR 313 (584)
Q Consensus 275 -----------------------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~------~~~v~~~~~ 313 (584)
....+.+.+.+.+++.||+++++++|+++. ++.+.+..
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~- 150 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV- 150 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE-
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE-
Confidence 124455667788888999999999999985 24455554
Q ss_pred CCCeEEEEecceEEEccCCCCCc
Q 045826 314 ATGQISSIPYGMVVWSTGIGTRP 336 (584)
Q Consensus 314 ~~G~~~~i~~D~vI~a~G~~~~p 336 (584)
.+| + +.+|.||+|+|..+.|
T Consensus 151 ~~g-~--i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 151 NST-Q--WQCKNLIVATGGLSMP 170 (401)
T ss_dssp TTE-E--EEESEEEECCCCSSCG
T ss_pred CCC-E--EECCEEEECCCCccCC
Confidence 334 3 9999999999976654
No 227
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.89 E-value=5.6e-05 Score=75.58 Aligned_cols=92 Identities=18% Similarity=0.181 Sum_probs=69.1
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEE-ecCCccc------------ccccc-----HHHHHHHH
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITL-LEAGDHI------------LNMFD-----KRITASAE 284 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~l-v~~~~~i------------l~~~~-----~~~~~~~~ 284 (584)
.+|+|||||+.|+.+|..|++.+ .+|++ +++. .+ .|.++ .++..++.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGG--------------LKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHT--------------CSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHH
Confidence 48999999999999999999864 68888 8873 21 12222 57888888
Q ss_pred HHHHhCCcEEEeCCceeEE-cC--CeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 285 EKFKRDGIDLKTGSMVVKL-SD--KEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v-~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
+.+++.|++++.+ +|+++ +. +.+.+.-..++ ++.+|.+|+|+|..
T Consensus 70 ~~~~~~~v~~~~~-~v~~i~~~~~~~~~v~~~~~~---~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQILKNSDGSFTIKLEGGK---TELAKAVIVCTGSA 117 (315)
T ss_dssp HHHTTTCCEEECC-CEEEEEECTTSCEEEEETTSC---EEEEEEEEECCCEE
T ss_pred HHHHHcCcEEEEE-EEEEEecCCCCcEEEEEecCC---EEEeCEEEEeeCCC
Confidence 9999999999998 88888 44 44553111223 39999999999953
No 228
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.88 E-value=1.5e-05 Score=84.89 Aligned_cols=90 Identities=18% Similarity=0.206 Sum_probs=69.8
Q ss_pred hccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc-------ccc--ccHHHHHHHHHHHHhC
Q 045826 220 KKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI-------LNM--FDKRITASAEEKFKRD 290 (584)
Q Consensus 220 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i-------l~~--~~~~~~~~~~~~L~~~ 290 (584)
...++|+|||||+.|+.+|..|++.+ .+|+|+++.+.+ +|. ++..+.+...+.+++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G--------------~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKG--------------YEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADA 185 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHC
Confidence 45679999999999999999999865 789999998875 233 3567777788889999
Q ss_pred CcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 291 GIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 291 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
||++++++.|. ..+.+.+ +. +.+|.||+|+|..
T Consensus 186 gv~~~~~~~v~----~~v~~~~---~~---~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 186 GVIYHPNFEVG----RDASLPE---LR---RKHVAVLVATGVY 218 (456)
T ss_dssp TCEEETTCCBT----TTBCHHH---HH---SSCSEEEECCCCC
T ss_pred CcEEEeCCEec----cEEEhhH---hH---hhCCEEEEecCCC
Confidence 99999998763 1222221 22 6799999999964
No 229
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.88 E-value=6e-05 Score=76.30 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=70.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHH-HHHHHHcCCcEEEE-EEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPI-RNIVRKKGMDIQFK-EAEC 133 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~-~~~~~~~g~~v~~~-~~~v 133 (584)
..++|+|||+|..|+.+|..|++.+.+|+++++.+.+.. ...+ +.++++.+ ++++ ..++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------~~~~~~~~~~~~g--v~i~~~~~v 218 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-----------------SKIMQQRALSNPK--IDVIWNSSV 218 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------CHHHHHHHHTCTT--EEEECSEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------cHHHHHHHHhCCC--eeEecCCce
Confidence 357999999999999999999999999999999875421 1122 24455566 5554 5788
Q ss_pred EEEecCC---C--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 134 YKIDAEK---K--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 134 ~~id~~~---~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
..++.+. + .+.+.+.. +.+..++.+|.+|+|+|..|+..
T Consensus 219 ~~i~~~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 219 VEAYGDGERDVLGGLKVKNVV-----TGDVSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp EEEEESSSSSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESCG
T ss_pred EEEeCCCCccceeeEEEEecC-----CCceEEEecCEEEEEeCCccchH
Confidence 8888766 3 36665421 11124899999999999988754
No 230
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.88 E-value=4.6e-05 Score=81.79 Aligned_cols=104 Identities=17% Similarity=0.287 Sum_probs=75.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
.+++|+|||||+.|+.+|..|++.|.+|+++++...+ +. ...++...+.+.+++.|+++ +....|..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l------~~------~d~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 252 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL------RG------FDQQMAELVAASMEERGIPF-LRKTVPLS 252 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS------TT------SCHHHHHHHHHHHHHTTCCE-EETEEEEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC------cc------cCHHHHHHHHHHHHhCCCEE-EeCCEEEE
Confidence 3578999999999999999999999999999975311 11 12245666778888888776 34667888
Q ss_pred EecCCC---EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEKK---QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
+..... .|.+.++. ..+..++.+|.+|+|+|..|+..
T Consensus 253 i~~~~~~~~~v~~~~~~-----~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 253 VEKQDDGKLLVKYKNVE-----TGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEECTTSCEEEEEEETT-----TCCEEEEEESEEEECSCEEECCG
T ss_pred EEEcCCCcEEEEEecCC-----CCceeEEEcCEEEECcccccCcC
Confidence 876432 35555432 11234799999999999988754
No 231
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.87 E-value=0.00011 Score=81.59 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccC------CCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN------SFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~------g~~V~lid~~~~ 91 (584)
..||||||||.||+++|..|++. |.+|+||||.+.
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 47999999999999999999976 999999999854
No 232
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.87 E-value=2.4e-05 Score=84.05 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=75.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ...++...+.+.+++.|+++ +....|..
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-----------~~~~~~~~l~~~l~~~Gv~i-~~~~~V~~ 257 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-----------FDYDLRQLLNDAMVAKGISI-IYEATVSQ 257 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------SCHHHHHHHHHHHHHHTCEE-ESSCCEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-----------cCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 3679999999999999999999999999999998753210 12245566777888888554 23477888
Q ss_pred EecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 136 IDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 136 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
++.++..+.+...++ .++.+|.+|+|+|..|+...
T Consensus 258 i~~~~~~v~v~~~~g--------~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 258 VQSTENCYNVVLTNG--------QTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp EEECSSSEEEEETTS--------CEEEESEEEECCCEEECCTT
T ss_pred EEeeCCEEEEEECCC--------cEEEcCEEEEeeCCCcCCCC
Confidence 887655444433221 17999999999999887653
No 233
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.85 E-value=3.8e-05 Score=83.35 Aligned_cols=101 Identities=14% Similarity=0.305 Sum_probs=73.7
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEEe
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKID 137 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id 137 (584)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. ...++...+.+.+++.|+++ +...+|+.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~GV~i-~~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-----------KDNETRAYVLDRMKEQGMEI-ISGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-----------CSHHHHHHHHHHHHHTTCEE-ESSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-----------ccHHHHHHHHHHHHhCCcEE-EECCEEEEEE
Confidence 89999999999999999999999999999998753211 12345666788888888654 2366888887
Q ss_pred cCCCE----EEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 138 AEKKQ----IYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 138 ~~~~~----v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
.++.. +.+...+ + +.++.+|.||+|+|.+|+..
T Consensus 283 ~~~~~~v~~~~v~~~~-----G--~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 283 EDANGRVQAVVAMTPN-----G--EMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp ECTTSBEEEEEEEETT-----E--EEEEECSCEEECCCCEECCH
T ss_pred EcCCCceEEEEEEECC-----C--cEEEEcCEEEECcCCccCCc
Confidence 63222 3333221 1 12799999999999998753
No 234
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.85 E-value=6.5e-05 Score=75.84 Aligned_cols=93 Identities=18% Similarity=0.221 Sum_probs=68.5
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc-----------ccccc-----cHHHHHHHHHH
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH-----------ILNMF-----DKRITASAEEK 286 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-----------il~~~-----~~~~~~~~~~~ 286 (584)
.+|+|||||+.|+.+|..|++.+ .+|+|+++..- ..+.+ ...+.+++.+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 74 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQ--------------LSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQ 74 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHcC--------------CcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999998854 78999998721 01222 34677778888
Q ss_pred HHhCCcEEEeCCceeEEcCC---e--EEEEeCCCCeEEEEecceEEEccCCC
Q 045826 287 FKRDGIDLKTGSMVVKLSDK---E--ISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 287 L~~~GV~v~~~~~V~~v~~~---~--v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
+++.|++++. .++++++.+ . +.+.. .+|+. +.+|.+|+|+|..
T Consensus 75 ~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~-~~g~~--~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 75 AEKFGAKVEM-DEVQGVQHDATSHPYPFTVR-GYNGE--YRAKAVILATGAD 122 (325)
T ss_dssp HHHTTCEEEE-CCEEEEEECTTSSSCCEEEE-ESSCE--EEEEEEEECCCEE
T ss_pred HHHcCCEEEe-eeEEEEEeccCCCceEEEEE-CCCCE--EEeCEEEECcCCC
Confidence 8999999998 578888533 2 23222 23654 9999999999954
No 235
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.85 E-value=4e-05 Score=83.22 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHhccc------------CCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS------------NSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~------------~g~~V~lid~~~ 90 (584)
.++|||||||+||+++|..|++ .|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 5799999999999999999998 899999999864
No 236
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.84 E-value=3.6e-05 Score=84.04 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
..+|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 469999999999999999999999999999998654
No 237
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.84 E-value=9.7e-05 Score=73.94 Aligned_cols=92 Identities=20% Similarity=0.230 Sum_probs=69.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCc-EEEEecCCcc-----------ccccc-----cHHHHHHHHHH
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFT-RITLLEAGDH-----------ILNMF-----DKRITASAEEK 286 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~-----------il~~~-----~~~~~~~~~~~ 286 (584)
+|+|||||+.|+.+|..|++.+ . +|+++++... ..+.+ ...+.+++.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGG--------------VKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHCC--------------CCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 7999999999999999998754 6 8999988521 01222 25677778888
Q ss_pred HHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 287 FKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 287 L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
+++.|++++. ++|+.++ .+.+.+.. .+|+. +.+|.||+|+|..
T Consensus 69 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSKKDSHFVILA-EDGKT--FEAKSVIIATGGS 113 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCCEE
T ss_pred HHHcCCEEEE-EEEEEEEEcCCEEEEEE-cCCCE--EECCEEEECCCCC
Confidence 8899999998 7888885 34444433 34654 9999999999953
No 238
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.84 E-value=2.8e-05 Score=83.67 Aligned_cols=102 Identities=17% Similarity=0.229 Sum_probs=71.6
Q ss_pred CCeEEEECCcHHHHHHHHhccc----CCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS----NSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAE 132 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~----~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~ 132 (584)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+..... .-+..+...+.+.+++.|+++. ....
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~----------~l~~~~~~~~~~~l~~~GV~v~-~~~~ 248 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK----------ILPEYLSNWTMEKVRREGVKVM-PNAI 248 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT----------TSCHHHHHHHHHHHHTTTCEEE-CSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc----------cCCHHHHHHHHHHHHhcCCEEE-eCCE
Confidence 5799999999999999999874 57899999987642211 1112445567778888885542 3457
Q ss_pred EEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 133 CYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 133 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
|+.++.+++.+.+...++ .++.+|.+|+|+|..|+..
T Consensus 249 V~~i~~~~~~~~v~l~dG--------~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDG--------RKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp EEEEEEETTEEEEEETTS--------CEEEESEEEECCCEEECCT
T ss_pred EEEEEecCCeEEEEECCC--------CEEECCEEEECCCCCccHH
Confidence 888876555443332221 1899999999999988753
No 239
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.84 E-value=7.1e-05 Score=75.99 Aligned_cols=98 Identities=17% Similarity=0.232 Sum_probs=70.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHH-HHHHHHcCCcEEEE-EEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPI-RNIVRKKGMDIQFK-EAECY 134 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~-~~~~~~~g~~v~~~-~~~v~ 134 (584)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+... ..+ ..++++.+ ++++ ..++.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~-----------------~~~~~~~~~~~g--V~v~~~~~v~ 215 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS-----------------KIMLDRARNNDK--IRFLTNHTVV 215 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC-----------------TTHHHHHHHCTT--EEEECSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc-----------------HHHHHHHhccCC--cEEEeCceeE
Confidence 579999999999999999999999999999988754210 112 24455566 5444 66888
Q ss_pred EEecCCC--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 135 KIDAEKK--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 135 ~id~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
.++.+.+ .+.+.+.. +.+..++++|.+|+|+|..|+..-
T Consensus 216 ~i~~~~~~~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~~ 256 (335)
T 2a87_A 216 AVDGDTTVTGLRVRDTN-----TGAETTLPVTGVFVAIGHEPRSGL 256 (335)
T ss_dssp EEECSSSCCEEEEEEET-----TSCCEEECCSCEEECSCEEECCTT
T ss_pred EEecCCcEeEEEEEEcC-----CCceEEeecCEEEEccCCccChhH
Confidence 9987663 36665421 011237999999999999987543
No 240
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.81 E-value=4.2e-05 Score=81.19 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=65.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCe-EEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFE-VQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~-V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
..++|+|||+|..|+.+|..|++.+.+ |+|+++.+.+ +...+ +. ....|.
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~--------------------------l~~~~--i~-~~~~v~ 261 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD--------------------------IQNES--LQ-QVPEIT 261 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--------------------------CBCSS--EE-EECCEE
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--------------------------CCCCC--eE-EecCeE
Confidence 357899999999999999999999999 9999998654 11123 43 356777
Q ss_pred EEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 135 KIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 135 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
.+..++..|.+.++. ..+.+|.||+|||..|+++-
T Consensus 262 ~~~~~~~~v~~~dG~---------~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 262 KFDPTTREIYLKGGK---------VLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp EEETTTTEEEETTTE---------EECCCSEEEECCCBCCCCCC
T ss_pred EEecCCCEEEECCCC---------EeccCCEEEECCCCCcCCCC
Confidence 887666778776542 24789999999999988665
No 241
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.81 E-value=4.5e-05 Score=81.73 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=74.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+++.|+++ +....+..+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~---------~d~~~~~~~~~~l~~~gv~i-~~~~~v~~i 254 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR--S---------FDSMISTNCTEELENAGVEV-LKFSQVKEV 254 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--T---------SCHHHHHHHHHHHHHTTCEE-ETTEEEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc--c---------cCHHHHHHHHHHHHHCCCEE-EeCCEEEEE
Confidence 57999999999999999999999999999998875331 0 12245566778888888654 235678888
Q ss_pred ecCC-C-EEEEeecCccCCCCCc--eEEEeCCEEEEccCCCCCCC
Q 045826 137 DAEK-K-QIYCRTTEDRTCGGKE--EFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~~~-~-~v~~~~~~~~~~~~~~--~~~i~yD~LVlAtGs~~~~~ 177 (584)
+... . .+.+..... ...+ ...+.+|.+|+|+|..|+..
T Consensus 255 ~~~~~~~~~~v~~~~~---~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 255 KKTLSGLEVSMVTAVP---GRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EECSSSEEEEEEECCT---TSCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEcCCCcEEEEEEccC---CCCcccceEEEcCEEEEeeccccCCC
Confidence 7543 2 233322110 0011 14799999999999988765
No 242
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.80 E-value=5.2e-05 Score=82.77 Aligned_cols=35 Identities=20% Similarity=0.361 Sum_probs=32.3
Q ss_pred CCCeEEEECCcHHHHHHHHhccc---CCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKS---NSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~---~g~~V~lid~~~ 90 (584)
..++|||||||++|+++|..|++ .|++|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 35799999999999999999998 999999999865
No 243
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.79 E-value=6.8e-05 Score=80.56 Aligned_cols=105 Identities=14% Similarity=0.175 Sum_probs=73.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
.+++|+|||||+.|+.+|..|++.|.+|+++++... ++. ...++...+.+.+++.++++ +....+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~------l~~------~d~~~~~~l~~~l~~~gv~~-~~~~~v~~ 250 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP------LRG------FDQQMSSLVTEHMESHGTQF-LKGCVPSH 250 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STT------SCHHHHHHHHHHHHHTTCEE-EETEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc------ccc------CCHHHHHHHHHHHHHCCCEE-EeCCEEEE
Confidence 356899999999999999999999999999998631 111 12345666788888888665 33557777
Q ss_pred EecC-CC--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 136 IDAE-KK--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 136 id~~-~~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
+... +. .+.+.+.. +.+..++.+|.+|+|+|..|+...
T Consensus 251 i~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 251 IKKLPTNQLQVTWEDHA-----SGKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp EEECTTSCEEEEEEETT-----TTEEEEEEESEEEECSCEEESCGG
T ss_pred EEEcCCCcEEEEEEeCC-----CCeeEEEECCEEEEcccCCcccCc
Confidence 7652 22 34444421 112236899999999999887643
No 244
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.77 E-value=5.3e-05 Score=78.23 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=51.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC-CCCCCCCcccccc---------ccc-c-----CcccccHHHHHH
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR-NYFAFTPLLPSVT---------NGT-V-----EARSIVEPIRNI 118 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~-~~~~~~p~~~~~~---------~g~-~-----~~~~i~~~~~~~ 118 (584)
..+++|+|||||++||++|+.|++.|++|+|+|++ +..++....+... .+. . ........+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 34679999999999999999999999999999999 8777754432211 010 0 011224456788
Q ss_pred HHHcCCcE
Q 045826 119 VRKKGMDI 126 (584)
Q Consensus 119 ~~~~g~~v 126 (584)
+++.++..
T Consensus 122 ~~~lGl~~ 129 (376)
T 2e1m_A 122 IDKLGLKR 129 (376)
T ss_dssp HHHTTCCE
T ss_pred HHHcCCCc
Confidence 88888543
No 245
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.77 E-value=8.6e-05 Score=80.44 Aligned_cols=104 Identities=16% Similarity=0.282 Sum_probs=69.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
+++|+|||||+.|+.+|..|++.|.+|+++++... ++. ...++...+.+.+++.|+++. ....+..+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~------l~~------~d~~~~~~~~~~l~~~GV~v~-~~~~v~~v 276 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL------LRG------FDQDMANKIGEHMEEHGIKFI-RQFVPIKV 276 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STT------SCHHHHHHHHHHHHHTTCEEE-ESEEEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc------ccc------CCHHHHHHHHHHHHHCCCEEE-eCCeEEEE
Confidence 56899999999999999999999999999997421 111 123456667788888886652 23344444
Q ss_pred ecCC----CEEE--EeecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 137 DAEK----KQIY--CRTTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 137 d~~~----~~v~--~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
.... ..+. +.... +.+..++++|.+|+|+|..|+...
T Consensus 277 ~~~~~~~~~~~~v~~~~~~-----g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 277 EQIEAGTPGRLRVVAQSTN-----SEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEEECCTTCEEEEEEEESS-----SSCEEEEEESEEEECSCEEESCSS
T ss_pred EEccCCCCceEEEEEEECC-----CcEEEEEECCEEEEecCCcccCCC
Confidence 3211 3333 33221 112246789999999999987653
No 246
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.77 E-value=1.1e-05 Score=87.11 Aligned_cols=41 Identities=20% Similarity=0.138 Sum_probs=36.9
Q ss_pred CCCeEEEECCcHHHHHHHHhccc-CCCeEEEEcCCCCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKS-NSFEVQVVSPRNYFAFTP 96 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid~~~~~~~~p 96 (584)
...||||||||++||+||++|++ .|++|+|+|++++.++..
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 35799999999999999999986 699999999999988854
No 247
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.77 E-value=6.3e-05 Score=82.00 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=72.1
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc--------c--------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN--------M-------------------- 274 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--------~-------------------- 274 (584)
.+|+|||||++|+.+|..|.+.+ .+|+|+++.+.+.. .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQG--------------LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 48999999999999999998743 79999998654321 0
Q ss_pred ---------ccHHHHHHHHHHHHhCCc--EEEeCCceeEEc--CC--eEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 275 ---------FDKRITASAEEKFKRDGI--DLKTGSMVVKLS--DK--EISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 275 ---------~~~~~~~~~~~~L~~~GV--~v~~~~~V~~v~--~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
-.+++.+++.+.+++.|+ +++++++|++++ ++ ...+.. .+|++ +.||.||+|+|..
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~-~~G~~--i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT-DRGDE--VSARFLVVAAGPL 158 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE-TTCCE--EEEEEEEECCCSE
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE-CCCCE--EEeCEEEECcCCC
Confidence 125677888888899998 899999999984 33 233333 45775 9999999999953
No 248
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.76 E-value=4.7e-05 Score=82.29 Aligned_cols=34 Identities=32% Similarity=0.471 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhccc---CCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS---NSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~---~g~~V~lid~~~ 90 (584)
.++|||||||++|+++|..|++ .|++|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 4699999999999999999998 999999999864
No 249
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.76 E-value=0.00012 Score=77.81 Aligned_cols=97 Identities=22% Similarity=0.393 Sum_probs=70.5
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-------------------c----------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN-------------------M---------- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-------------------~---------- 274 (584)
.|+|||||++|+-+|..+++.+ .+|+|+++.+.+.. .
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G--------------~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~ 93 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEG--------------ANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGR 93 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGG
T ss_pred CEEEECCcHHHHHHHHHHHHCC--------------CCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChH
Confidence 7999999999999999998754 67888877653210 0
Q ss_pred ---------------------------------c-----cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCC
Q 045826 275 ---------------------------------F-----DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRA 314 (584)
Q Consensus 275 ---------------------------------~-----~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~ 314 (584)
+ ...+.+.+.+.+++.||+++++++|+++. ++.+......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 94 FLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp GGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred HHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 0 13445567777888999999999999984 4443322334
Q ss_pred CCeEEEEecceEEEccCCCCCc
Q 045826 315 TGQISSIPYGMVVWSTGIGTRP 336 (584)
Q Consensus 315 ~G~~~~i~~D~vI~a~G~~~~p 336 (584)
+|+. +.+|.||+|+|....|
T Consensus 174 ~G~~--i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 174 TGEV--LETNHVVIAVGGKSVP 193 (447)
T ss_dssp TCCE--EECSCEEECCCCSSSG
T ss_pred CCCE--EECCEEEECCCCCcCC
Confidence 5764 9999999999965533
No 250
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.75 E-value=7.7e-05 Score=81.13 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=73.0
Q ss_pred ceEEEECCChhHHHHHHHHH-HHHHHhHhhhCcCCCCCcEEEEecCCccccc--------c-------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALH-DFVIDDLSKLYPSLKEFTRITLLEAGDHILN--------M------------------- 274 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~-~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--------~------------------- 274 (584)
.+|+|||||++|+.+|..|+ +. +.+|+|+++.+.+.. .
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~--------------G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHEL--------------GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcC--------------CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 48999999999999999998 53 368999998754321 0
Q ss_pred ----------ccHHHHHHHHHHHHhCCc--EEEeCCceeEEc--CC--eEEEEeCCCCeEEEEecceEEEccCCCCCc
Q 045826 275 ----------FDKRITASAEEKFKRDGI--DLKTGSMVVKLS--DK--EISTKDRATGQISSIPYGMVVWSTGIGTRP 336 (584)
Q Consensus 275 ----------~~~~~~~~~~~~L~~~GV--~v~~~~~V~~v~--~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p 336 (584)
..+++.+++.+.+++.|+ +++++++|++++ ++ ...+.. .+|++ +.||.||+|+|....|
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~-~~G~~--i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT-DHGEV--YRAKYVVNAVGLLSAI 149 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE-TTSCE--EEEEEEEECCCSCCSB
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE-cCCCE--EEeCEEEECCcccccC
Confidence 134677888888889998 899999999985 22 334433 45775 8999999999964444
No 251
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.75 E-value=1.5e-05 Score=84.25 Aligned_cols=95 Identities=22% Similarity=0.304 Sum_probs=67.1
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc--c---------cHHHHHHHHHHHHhCC
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM--F---------DKRITASAEEKFKRDG 291 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~--~---------~~~~~~~~~~~L~~~G 291 (584)
++|+|||||+.|+.+|..|++.. .+.+|+|+++.+.+... + ...+...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 38999999999999999998842 25899999998875321 1 0111112334566789
Q ss_pred cEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
|+++.+ .++.++.+...+.. .+|++ +.+|.+|+|+|..
T Consensus 71 v~~~~~-~v~~id~~~~~v~~-~~g~~--i~~d~liiAtG~~ 108 (430)
T 3h28_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGPK 108 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCCE
T ss_pred CEEEEE-EEEEEECCCCEEEE-CCCcE--EECCEEEEcCCcc
Confidence 999975 89999765433322 23664 9999999999954
No 252
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.75 E-value=7.9e-05 Score=77.66 Aligned_cols=92 Identities=16% Similarity=0.229 Sum_probs=67.3
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc-------------------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL------------------------------- 272 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------------------------------- 272 (584)
+|+|||||++|+-+|..|++.+ .+|+|+++.+.+-
T Consensus 8 dVvIVGaG~aGl~~A~~L~~~G--------------~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~ 73 (399)
T 2x3n_A 8 DVLINGCGIGGAMLAYLLGRQG--------------HRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGR 73 (399)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCE
T ss_pred CEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCC
Confidence 8999999999999999999864 5566665543220
Q ss_pred ------------------------c-----cccHHHHHHHHHHHHhC-CcEEEeCCceeEEc--CCeE--EEEeCCCCeE
Q 045826 273 ------------------------N-----MFDKRITASAEEKFKRD-GIDLKTGSMVVKLS--DKEI--STKDRATGQI 318 (584)
Q Consensus 273 ------------------------~-----~~~~~~~~~~~~~L~~~-GV~v~~~~~V~~v~--~~~v--~~~~~~~G~~ 318 (584)
+ .....+.+.+.+.+++. ||+++.+++|++++ ++++ .+.. .+|++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~-~~g~~ 152 (399)
T 2x3n_A 74 VRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRL-NDGRV 152 (399)
T ss_dssp EECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEE-TTSCE
T ss_pred cceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEE-CCCCE
Confidence 0 01235566777778887 99999999999985 3445 4443 44764
Q ss_pred EEEecceEEEccCC
Q 045826 319 SSIPYGMVVWSTGI 332 (584)
Q Consensus 319 ~~i~~D~vI~a~G~ 332 (584)
+.+|.||.|+|.
T Consensus 153 --~~ad~vV~AdG~ 164 (399)
T 2x3n_A 153 --LRPRVVVGADGI 164 (399)
T ss_dssp --EEEEEEEECCCT
T ss_pred --EECCEEEECCCC
Confidence 999999999994
No 253
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.73 E-value=0.00015 Score=78.66 Aligned_cols=95 Identities=17% Similarity=0.246 Sum_probs=71.7
Q ss_pred cceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCc--ccc------------ccccHHHHHHHHHHH
Q 045826 222 ILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGD--HIL------------NMFDKRITASAEEKF 287 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~--~il------------~~~~~~~~~~~~~~L 287 (584)
..+|+|||||+.|+.+|..+++.+ .+|++++... .+. ....+.+...+.+.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G--------------~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 277 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKG--------------IRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHV 277 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 447999999999999999998854 7888887531 111 012457778888889
Q ss_pred HhCCcEEEeCCceeEEcCC-----eEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 288 KRDGIDLKTGSMVVKLSDK-----EISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 288 ~~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
++.||+++.+++|+.++.+ ...+.. .+|+. +.+|.||+|+|..
T Consensus 278 ~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~-~~g~~--~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 278 SDYDVDVIDSQSASKLVPAATEGGLHQIET-ASGAV--LKARSIIIATGAK 325 (521)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTSCEEEEE-TTSCE--EEEEEEEECCCEE
T ss_pred HHcCCEEEcCCEEEEEEeccCCCceEEEEE-CCCCE--EEcCEEEECCCCC
Confidence 9999999999999999632 344433 34765 9999999999954
No 254
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.71 E-value=5.6e-05 Score=76.26 Aligned_cols=37 Identities=16% Similarity=0.295 Sum_probs=33.4
Q ss_pred CeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYFAF 94 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~~~ 94 (584)
.||+|||||++|+++|..|++. |++|+|+|+++..+.
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 4899999999999999999976 999999999877653
No 255
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.71 E-value=8.3e-05 Score=80.99 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=72.6
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-----------------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN----------------------------- 273 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~----------------------------- 273 (584)
.+|+|||||++|+.+|..|.+.+ .+|+|+++.+.+..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g--------------~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAG--------------MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 38999999999999999998743 78999999864310
Q ss_pred --------cccHHHHHHHHHHHHhCCc--EEEeCCceeEEcC--C--eEEEEeCCCCeEEEEecceEEEccCCCCCc
Q 045826 274 --------MFDKRITASAEEKFKRDGI--DLKTGSMVVKLSD--K--EISTKDRATGQISSIPYGMVVWSTGIGTRP 336 (584)
Q Consensus 274 --------~~~~~~~~~~~~~L~~~GV--~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p 336 (584)
.-.+++.+++.+.+++.|+ .++++++|++++- + ...+.. .+|++ +.||.||+|+|....|
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~~--~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL-DNEEV--VTCRFLISATGPLSAS 149 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE-TTTEE--EEEEEEEECCCSCBC-
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE-CCCCE--EEeCEEEECcCCCCCC
Confidence 0136677888888888887 7899999999852 2 233333 45775 9999999999964444
No 256
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.71 E-value=7e-05 Score=79.87 Aligned_cols=102 Identities=15% Similarity=0.255 Sum_probs=74.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+++.|+++ +....|..
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~--~---------~~~~~~~~l~~~l~~~Gv~i-~~~~~v~~ 236 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS--R---------FDQDMRRGLHAAMEEKGIRI-LCEDIIQS 236 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--T---------SCHHHHHHHHHHHHHTTCEE-ECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc--c---------cCHHHHHHHHHHHHHCCCEE-ECCCEEEE
Confidence 367999999999999999999999999999999875321 0 12245666778888888554 23467888
Q ss_pred EecCCC-EEEEe-ecCccCCCCCceEEEeCCEEEEccCCCCCCCC
Q 045826 136 IDAEKK-QIYCR-TTEDRTCGGKEEFALDYDILVIAMGAQANTFN 178 (584)
Q Consensus 136 id~~~~-~v~~~-~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~~ 178 (584)
++.++. .+.+. ..+ + ++.+|.+|+|+|..|+...
T Consensus 237 i~~~~~~~~~v~~~~~-----g----~i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 237 VSADADGRRVATTMKH-----G----EIVADQVMLALGRMPNTNG 272 (463)
T ss_dssp EEECTTSCEEEEESSS-----C----EEEESEEEECSCEEESCTT
T ss_pred EEEcCCCEEEEEEcCC-----C----eEEeCEEEEeeCcccCCCC
Confidence 877533 23333 221 1 3899999999999887653
No 257
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.70 E-value=6.3e-05 Score=81.46 Aligned_cols=70 Identities=21% Similarity=0.299 Sum_probs=49.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccccc-ccC--c---ccccHHHHHHHHHcCCcE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNG-TVE--A---RSIVEPIRNIVRKKGMDI 126 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g-~~~--~---~~i~~~~~~~~~~~g~~v 126 (584)
++||||||||++||+||..|++.|++|+|+|+++..++.........+ ..+ . .....++.+++++.++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLET 79 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcc
Confidence 579999999999999999999999999999999988776433222111 111 0 011345677888888553
No 258
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.69 E-value=5.3e-05 Score=79.65 Aligned_cols=70 Identities=16% Similarity=0.232 Sum_probs=49.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCC-CeEEEEcCCCCCCCCCccccccccccCc-----ccccHHHHHHHHHcCCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNS-FEVQVVSPRNYFAFTPLLPSVTNGTVEA-----RSIVEPIRNIVRKKGMD 125 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g-~~V~lid~~~~~~~~p~~~~~~~g~~~~-----~~i~~~~~~~~~~~g~~ 125 (584)
.++||+|||||++||+||..|++.| ++|+|+|+++..++............+. ......+.++++..|+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~ 80 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDK 80 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCc
Confidence 4579999999999999999999999 8999999999888764433221111111 11124467788887743
No 259
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.67 E-value=0.0002 Score=74.43 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=68.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc----------c-c-------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI----------L-N------------------- 273 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i----------l-~------------------- 273 (584)
+|+|||||++|+-+|..|++.+ .+|+|+++.+.. + +
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAG--------------IDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 7999999999999999999865 677777765431 0 0
Q ss_pred ------------------------c------ccHHHHHHHHHHHHhCCcEEEeCCceeEEcC---CeEEEEeCCCCeEEE
Q 045826 274 ------------------------M------FDKRITASAEEKFKRDGIDLKTGSMVVKLSD---KEISTKDRATGQISS 320 (584)
Q Consensus 274 ------------------------~------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~v~~~~~~~G~~~~ 320 (584)
. -...+.+.+.+.+.+.|++++.+++|++++. +.+.+....+|+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 0134455666777788999999999999964 233333212477445
Q ss_pred EecceEEEccCCC
Q 045826 321 IPYGMVVWSTGIG 333 (584)
Q Consensus 321 i~~D~vI~a~G~~ 333 (584)
+.+|+||.|.|..
T Consensus 150 ~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 150 LDCDYIAGCDGFH 162 (394)
T ss_dssp EECSEEEECCCTT
T ss_pred EEeCEEEECCCCC
Confidence 9999999999953
No 260
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.66 E-value=0.00017 Score=79.02 Aligned_cols=55 Identities=16% Similarity=0.128 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--C-Ce---EEEEeCCCCeEEEEecceEEEccCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--D-KE---ISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+.+.+.+.+++.||+|+++++|+++. + +. |++.+ .+|+..++.+|.||+|+|..
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 256 HVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCc
Confidence 445566777788999999999999984 3 33 44443 24765569999999999953
No 261
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.66 E-value=0.00014 Score=72.80 Aligned_cols=94 Identities=14% Similarity=0.121 Sum_probs=66.5
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc--------c--------ccc-----ccHHHHHH
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH--------I--------LNM-----FDKRITAS 282 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~--------i--------l~~-----~~~~~~~~ 282 (584)
.|+|||||+.|+.+|..+++.+ .+|+++++.+. + .|. ..+++.+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g--------------~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSS--------------LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 7999999999999999998865 68899987542 0 011 13567788
Q ss_pred HHHHHHhCCcEEEeCCceeEEc-CCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 283 AEEKFKRDGIDLKTGSMVVKLS-DKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 283 ~~~~L~~~GV~v~~~~~V~~v~-~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
..+.+++.++++...+...... .+...... .++.+ +.+|.+|+|||.++
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~--~~~~~liiATG~~~ 121 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFT-EEGKE--VLTKSVIIATGATA 121 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEE-TTCCE--EEEEEEEECCCEEE
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEE-CCCeE--EEEeEEEEcccccc
Confidence 8888999999988765333332 23333333 33554 99999999999644
No 262
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.65 E-value=9.9e-05 Score=78.57 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=69.0
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc-------cc----------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL-------NM---------------------- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il-------~~---------------------- 274 (584)
.|+|||||++|+.+|..|++.+... ...+|+++++.+.+. +.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~---------~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQ---------GALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYS 102 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHH---------CCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTS
T ss_pred CEEEECCCHHHHHHHHHHHhccccc---------CcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCC
Confidence 7999999999999999999876210 005899998876321 00
Q ss_pred ----------------------ccHHHHHHHHHHHHhCCcEEEeCCceeEEcCC----e-----EEEEeCCCCeEEEEec
Q 045826 275 ----------------------FDKRITASAEEKFKRDGIDLKTGSMVVKLSDK----E-----ISTKDRATGQISSIPY 323 (584)
Q Consensus 275 ----------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~----~-----v~~~~~~~G~~~~i~~ 323 (584)
...++.+++....++.+++++++++|++++.+ + |...+ .+|+..++.+
T Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~-g~g~~~~~~~ 181 (463)
T 3s5w_A 103 FVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN-ADGEELVRTT 181 (463)
T ss_dssp HHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE-TTSCEEEEEE
T ss_pred hhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec-CCCceEEEEe
Confidence 12345566666667779999999999998643 2 33333 1244345999
Q ss_pred ceEEEccCC
Q 045826 324 GMVVWSTGI 332 (584)
Q Consensus 324 D~vI~a~G~ 332 (584)
|.||+|+|.
T Consensus 182 d~lVlAtG~ 190 (463)
T 3s5w_A 182 RALVVSPGG 190 (463)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999995
No 263
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.65 E-value=8e-05 Score=80.28 Aligned_cols=102 Identities=14% Similarity=0.208 Sum_probs=71.8
Q ss_pred CeEEEECCcHHHHHHHHhccc--------------CCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcC
Q 045826 58 KKVVVLGTGWAGTTFLKILKS--------------NSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKG 123 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~--------------~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g 123 (584)
.+++|||||+.|+.+|..|+. .+.+|+|||..+...- . .+..+.....+.+++.|
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~-----~------~~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN-----M------FEKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc-----C------CCHHHHHHHHHHHHhcc
Confidence 479999999999999988762 2468999999875321 1 12355667788899999
Q ss_pred CcEEEEEEEEEEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCC
Q 045826 124 MDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQAN 175 (584)
Q Consensus 124 ~~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~ 175 (584)
+++ ..+..|+.++.+...+.....++ ...+.++++|.+|.|+|..|+
T Consensus 287 V~v-~~~~~v~~v~~~~~~~~~~~~dg----~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKV-HLRTAVAKVEEKQLLAKTKHEDG----KITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEE-ETTEEEEEECSSEEEEEEECTTS----CEEEEEEECSEEEECCCEECC
T ss_pred eee-ecCceEEEEeCCceEEEEEecCc----ccceeeeccCEEEEccCCcCC
Confidence 776 34788999987644443332221 111247999999999998764
No 264
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.64 E-value=0.00029 Score=78.60 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHhccc-----CCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS-----NSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~-----~g~~V~lid~~~~~ 92 (584)
..+|+|||||++||++|..|++ .|++|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 4699999999999999999999 99999999998653
No 265
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.64 E-value=0.00029 Score=71.21 Aligned_cols=91 Identities=18% Similarity=0.289 Sum_probs=63.9
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc--------------------cccHHHHHHH
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN--------------------MFDKRITASA 283 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--------------------~~~~~~~~~~ 283 (584)
.|+|||||++|+.+|..|++.+ .+|+|+++.+.+.. ...+.+.+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G--------------~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHCC--------------CcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 7999999999999999999864 78999998764310 1112222222
Q ss_pred H-------------------------------------------HHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeE
Q 045826 284 E-------------------------------------------EKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQI 318 (584)
Q Consensus 284 ~-------------------------------------------~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~ 318 (584)
. +.|. .|++++++++|++++ ++++.+.. .+|+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~-~~g~~ 147 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLD-AEGQN 147 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEE-TTSCE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEe-CCCcC
Confidence 2 2222 289999999999995 45666654 45664
Q ss_pred EEEecceEEEccC
Q 045826 319 SSIPYGMVVWSTG 331 (584)
Q Consensus 319 ~~i~~D~vI~a~G 331 (584)
...+|.||.|+|
T Consensus 148 -~~~a~~vV~a~g 159 (336)
T 1yvv_A 148 -HGPFSHVIIATP 159 (336)
T ss_dssp -EEEESEEEECSC
T ss_pred -ccccCEEEEcCC
Confidence 235999999999
No 266
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.63 E-value=0.00021 Score=71.59 Aligned_cols=94 Identities=16% Similarity=0.187 Sum_probs=68.7
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc---cc--------cc----ccHHHHHHHHHHHH
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH---IL--------NM----FDKRITASAEEKFK 288 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~---il--------~~----~~~~~~~~~~~~L~ 288 (584)
.|+||||||.|+.+|..+++.+ .+|+|+++..- ++ |. ..+++.....+...
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g--------------~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRAN--------------LKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 7999999999999999998865 78999987531 11 21 23567777778888
Q ss_pred hCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 289 RDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 289 ~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
+.++.+..+..+............ .++++ +.+|.+|+|||.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVIN-FGNKE--LTAKAVIIATGAEY 116 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEE-CSSCE--EEEEEEEECCCEEE
T ss_pred hccccccceeeeeeeeeecceeec-cCCeE--EEeceeEEcccCcc
Confidence 889999888777766544433333 23554 99999999999543
No 267
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.62 E-value=0.00026 Score=77.50 Aligned_cols=56 Identities=29% Similarity=0.231 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--C-Ce---EEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--D-KE---ISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+.+.+.+.+++.||+++++++|+++. + +. |++.+ .+|+..++.+|.||+|+|...
T Consensus 251 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 251 EIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcc
Confidence 344566677788999999999999984 3 33 44443 357655699999999999533
No 268
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.59 E-value=0.00022 Score=74.29 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=68.4
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc------ccHHHHH---------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM------FDKRITA--------------- 281 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~------~~~~~~~--------------- 281 (584)
.+|+|||||++|+.+|..|++.+ .+|+|+++.+...+. +.+...+
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAG--------------VDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 38999999999999999999864 788888876653111 1222111
Q ss_pred ----------------------------HHHHHHHh--CCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEc
Q 045826 282 ----------------------------SAEEKFKR--DGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWS 329 (584)
Q Consensus 282 ----------------------------~~~~~L~~--~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a 329 (584)
.+.+.|.+ .|++++.+++|++++ ++++++.. .+|++ +.+|.||.|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~~ad~vV~A 148 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRF-SDGTK--AEANWVIGA 148 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEE-TTSCE--EEESEEEEC
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEEC
Confidence 12222222 488999999999984 45566554 44765 999999999
Q ss_pred cCCCCCchHHHHH
Q 045826 330 TGIGTRPVIMDFM 342 (584)
Q Consensus 330 ~G~~~~p~~~~l~ 342 (584)
.| ..+.+...+
T Consensus 149 dG--~~S~vr~~~ 159 (397)
T 2vou_A 149 DG--GASVVRKRL 159 (397)
T ss_dssp CC--TTCHHHHHH
T ss_pred CC--cchhHHHHh
Confidence 99 455454443
No 269
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.57 E-value=4.4e-05 Score=81.22 Aligned_cols=43 Identities=19% Similarity=0.252 Sum_probs=38.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLL 98 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~ 98 (584)
..+||||||||++||++|..|++.|++|+|+|++++.++....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 4579999999999999999999999999999999998886443
No 270
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.56 E-value=5.4e-05 Score=78.82 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=33.0
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFA 93 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~ 93 (584)
.||+|||||++|+++|..|++.|++|+|+|+.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~ 37 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAAS 37 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 489999999999999999999999999999987543
No 271
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.55 E-value=0.00025 Score=74.24 Aligned_cols=94 Identities=17% Similarity=0.345 Sum_probs=68.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc--------cccc---------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH--------ILNM--------------------- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~--------il~~--------------------- 274 (584)
.|+|||||++|+-+|..|++.+ .+|+|+++.+. +.+.
T Consensus 7 dVvIIGgG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~ 72 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKSG--------------FKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQ 72 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEE
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcc
Confidence 8999999999999999998754 67777776531 0000
Q ss_pred ------------------------------c-cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCe--EEEEeCCCCeEE
Q 045826 275 ------------------------------F-DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKE--ISTKDRATGQIS 319 (584)
Q Consensus 275 ------------------------------~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~--v~~~~~~~G~~~ 319 (584)
+ ...+.+.+.+.+++.|++++.+++|++++ +++ +.+.. .+|+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~-~~g~~~ 151 (421)
T 3nix_A 73 KFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIED-INGNKR 151 (421)
T ss_dssp ECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEE-TTSCEE
T ss_pred cCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEc-CCCCEE
Confidence 0 12445566677777899999999999985 344 33433 457755
Q ss_pred EEecceEEEccCC
Q 045826 320 SIPYGMVVWSTGI 332 (584)
Q Consensus 320 ~i~~D~vI~a~G~ 332 (584)
++.+|.||.|+|.
T Consensus 152 ~~~a~~vV~A~G~ 164 (421)
T 3nix_A 152 EIEARFIIDASGY 164 (421)
T ss_dssp EEEEEEEEECCGG
T ss_pred EEEcCEEEECCCC
Confidence 6999999999994
No 272
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.54 E-value=0.00033 Score=76.96 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=66.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc-cc-----------------------cc-----
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH-IL-----------------------NM----- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-il-----------------------~~----- 274 (584)
.|+|||||++|+++|..+++.+ .+|.|+++.+. +. ..
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARMG--------------QQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhCC--------------CCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 8999999999999999999865 78888887631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEeCCceeEE--cCCeEEEEeCCCCeEEEEecce
Q 045826 275 -------------------------FD-KRITASAEEKFKR-DGIDLKTGSMVVKL--SDKEISTKDRATGQISSIPYGM 325 (584)
Q Consensus 275 -------------------------~~-~~~~~~~~~~L~~-~GV~v~~~~~V~~v--~~~~v~~~~~~~G~~~~i~~D~ 325 (584)
.+ ..+...+.+.+++ .||++ .+++|+.+ +++.+......+|.. +.+|.
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~--I~Ad~ 172 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLK--FRAKA 172 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEE--EEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCE--EECCE
Confidence 01 2345566777777 69999 46789988 345553333345764 99999
Q ss_pred EEEccCCC
Q 045826 326 VVWSTGIG 333 (584)
Q Consensus 326 vI~a~G~~ 333 (584)
||+|+|..
T Consensus 173 VVLATGt~ 180 (651)
T 3ces_A 173 VVLTVGTF 180 (651)
T ss_dssp EEECCSTT
T ss_pred EEEcCCCC
Confidence 99999954
No 273
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.54 E-value=0.00019 Score=76.20 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=68.3
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc-------------------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL------------------------------- 272 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------------------------------- 272 (584)
.|+|||||++|+-+|..|++.+ .+|+|+++.+...
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G--------------~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRG--------------LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSS--------------CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhh
Confidence 8999999999999999998754 5566665543210
Q ss_pred -----------------c----cc-cHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeE---EEEeCCCCeEEEEecce
Q 045826 273 -----------------N----MF-DKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEI---STKDRATGQISSIPYGM 325 (584)
Q Consensus 273 -----------------~----~~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v---~~~~~~~G~~~~i~~D~ 325 (584)
+ .+ ...+.+.+.+.+.+.|++++.+++|+++. ++.+ ++.+..+|+..++.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred hcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 0 01 13456677778888999999999999985 3443 34432147644699999
Q ss_pred EEEccCCC
Q 045826 326 VVWSTGIG 333 (584)
Q Consensus 326 vI~a~G~~ 333 (584)
||.|+|..
T Consensus 154 VV~AdG~~ 161 (453)
T 3atr_A 154 VVEATGYS 161 (453)
T ss_dssp EEECCGGG
T ss_pred EEECcCCc
Confidence 99999953
No 274
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.54 E-value=6.9e-05 Score=80.39 Aligned_cols=43 Identities=28% Similarity=0.220 Sum_probs=38.4
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL 97 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~ 97 (584)
...++|+|||||++||++|+.|++.|++|+|+|+++..++...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~ 51 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVW 51 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCcee
Confidence 3467999999999999999999999999999999998877543
No 275
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.54 E-value=5e-05 Score=80.95 Aligned_cols=90 Identities=19% Similarity=0.192 Sum_probs=67.7
Q ss_pred cceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc--------ccc--cHHHHHHHHHHHHhCC
Q 045826 222 ILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL--------NMF--DKRITASAEEKFKRDG 291 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--------~~~--~~~~~~~~~~~L~~~G 291 (584)
.++|+|||+|++|+.+|..|.+.+ ++.+|+++++.+.+. |.+ ...+...+.+.+++.|
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~g 73 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDR 73 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTT
T ss_pred CceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCC
Confidence 358999999999999999998753 247999999988764 322 2356667778888999
Q ss_pred cEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
|+++.++.+. ..+.+.+ . . +.||.||+|||..
T Consensus 74 v~~~~~~~v~----~~V~~~~---~-~--~~~d~lVlAtGs~ 105 (460)
T 1cjc_A 74 CAFYGNVEVG----RDVTVQE---L-Q--DAYHAVVLSYGAE 105 (460)
T ss_dssp EEEEBSCCBT----TTBCHHH---H-H--HHSSEEEECCCCC
T ss_pred cEEEeeeEEe----eEEEecc---c-e--EEcCEEEEecCcC
Confidence 9999997762 2232221 2 2 7899999999965
No 276
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.54 E-value=0.00014 Score=77.67 Aligned_cols=104 Identities=14% Similarity=0.238 Sum_probs=68.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEE
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYK 135 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~ 135 (584)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ....++...+.+.++ +++ +....|..
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~d~~~~~~l~~~l~---v~i-~~~~~v~~ 236 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT----------LEDQDIVNTLLSILK---LNI-KFNSPVTE 236 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------SCCHHHHHHHHHHHC---CCE-ECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC----------CCCHHHHHHHHhcCE---EEE-EECCEEEE
Confidence 3579999999999999999999999999999998754321 001123333444433 444 23557777
Q ss_pred EecCC-CEEEEeecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 136 IDAEK-KQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 136 id~~~-~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
++.+. ..+.+.... . +.++.++++|.+|+|+|.+|+..
T Consensus 237 i~~~~~~~v~v~~~~---~-~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 237 VKKIKDDEYEVIYST---K-DGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp EEEEETTEEEEEECC---T-TSCCEEEEESCEEECCCEEECCC
T ss_pred EEEcCCCcEEEEEEe---c-CCceEEEEcCEEEECcCCCcccc
Confidence 77654 444433220 0 01124799999999999998765
No 277
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.54 E-value=3.4e-05 Score=83.49 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=38.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCC-CeEEEEcCCCCCCCCCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNS-FEVQVVSPRNYFAFTPL 97 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g-~~V~lid~~~~~~~~p~ 97 (584)
..++|+|||||++||+||..|++.| ++|+|+|+++..++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~ 49 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQ 49 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCcee
Confidence 3579999999999999999999999 99999999998888653
No 278
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.52 E-value=0.00031 Score=70.24 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=61.5
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc---c---cc-------cccHHHHHHHHHHHHhC
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH---I---LN-------MFDKRITASAEEKFKRD 290 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~---i---l~-------~~~~~~~~~~~~~L~~~ 290 (584)
.|+|||+||.|+.+|..+++.+ .+|+|+++... + .+ ..++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRAR--------------KQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 7999999999999999888754 78999987531 1 01 12355666666666665
Q ss_pred C-cEEEeCCceeEEc---CCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 291 G-IDLKTGSMVVKLS---DKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 291 G-V~v~~~~~V~~v~---~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
+ +.++.. .+..+. .+..++.. .+|++ +.+|.||+|||.++
T Consensus 74 ~~~~~~~~-~~~~~~~~~~~~~~v~~-~~g~~--~~a~~liiATGs~p 117 (304)
T 4fk1_A 74 PSVHYYEK-TVVMITKQSTGLFEIVT-KDHTK--YLAERVLLATGMQE 117 (304)
T ss_dssp TTEEEEEC-CEEEEEECTTSCEEEEE-TTCCE--EEEEEEEECCCCEE
T ss_pred CCEEEEee-EEEEeeecCCCcEEEEE-CCCCE--EEeCEEEEccCCcc
Confidence 4 555544 444442 23344443 34665 99999999999543
No 279
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.52 E-value=0.00021 Score=73.76 Aligned_cols=53 Identities=15% Similarity=0.121 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
..+.+.+.+.+++.|++++.+++|++++. +++.+.. .+| . +.+|.||+|+|..
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~-~~g-~--~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKT-PSG-D--VWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEE-TTE-E--EEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEc-CCc-e--EEcCEEEECCChh
Confidence 45667778888899999999999999953 4454443 334 3 8999999999954
No 280
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.51 E-value=3e-05 Score=82.43 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=36.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCC------CeEEEEcCCCCCCCCCc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNS------FEVQVVSPRNYFAFTPL 97 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g------~~V~lid~~~~~~~~p~ 97 (584)
++||+|||||++||++|+.|++.| ++|+|+|+++..++...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~ 51 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQ 51 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEE
Confidence 579999999999999999999888 99999999988876543
No 281
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.51 E-value=0.00028 Score=72.78 Aligned_cols=52 Identities=31% Similarity=0.275 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEE-EEeCCCCeEEEEecceEEEccCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKEIS-TKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~-~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+...+.+.+++.|++++.+++|++++ ++.+. +.. .+| + +.+|.||+|+|..
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~-~~g-~--i~a~~VV~A~G~~ 204 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKT-NKG-I--IKTGIVVNATNAW 204 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE-TTE-E--EECSEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEE-CCc-E--EECCEEEECcchh
Confidence 444556677888999999999999985 34555 433 335 3 9999999999953
No 282
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.50 E-value=0.00043 Score=75.87 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--C-Ce---EEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--D-KE---ISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+...+.+.+++.||+++++++|+++. + +. |.+.+ .+|+..++.+|.||+|+|...
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCc
Confidence 455667777888999999999999983 3 33 44543 347655699999999999533
No 283
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.49 E-value=5.2e-05 Score=80.11 Aligned_cols=35 Identities=29% Similarity=0.477 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+++|+|||||++|+++|..|++.|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34799999999999999999999999999999986
No 284
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.48 E-value=0.00027 Score=79.27 Aligned_cols=102 Identities=19% Similarity=0.230 Sum_probs=72.8
Q ss_pred CCCeEEEEC--CcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEE
Q 045826 56 KKKKVVVLG--TGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAEC 133 (584)
Q Consensus 56 ~~~~VVIVG--gG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v 133 (584)
..++|+||| +|+.|+.+|..|++.|.+|+++++.+.+... .........+.+.+++.|+++ +...+|
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~----------~~~~~~~~~l~~~l~~~GV~i-~~~~~V 590 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW----------TNNTFEVNRIQRRLIENGVAR-VTDHAV 590 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG----------GGGGTCHHHHHHHHHHTTCEE-EESEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc----------cccchhHHHHHHHHHHCCCEE-EcCcEE
Confidence 346899999 9999999999999999999999988653211 111233456778888888665 346789
Q ss_pred EEEecCCCEEEEeecCccCCCCCceEEEeCCEEEEccCCCCC
Q 045826 134 YKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQAN 175 (584)
Q Consensus 134 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~ 175 (584)
+.|+.+...+..... .+..++.+|.||+|+|..|+
T Consensus 591 ~~i~~~~~~v~~~~~-------~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 591 VAVGAGGVTVRDTYA-------SIERELECDAVVMVTARLPR 625 (690)
T ss_dssp EEEETTEEEEEETTT-------CCEEEEECSEEEEESCEEEC
T ss_pred EEEECCeEEEEEccC-------CeEEEEECCEEEECCCCCCC
Confidence 999876433332111 11247999999999999875
No 285
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.48 E-value=6.7e-05 Score=80.16 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=48.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCc--c---cccHHHHHHHHHcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEA--R---SIVEPIRNIVRKKGM 124 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~--~---~i~~~~~~~~~~~g~ 124 (584)
..+||+|||||++||++|..|++.|++|+|+|+++..++............+. . .....+.+++++.++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNL 88 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCC
Confidence 46799999999999999999999999999999999888765433221111110 0 112356778888875
No 286
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.45 E-value=5.8e-05 Score=80.35 Aligned_cols=93 Identities=17% Similarity=0.158 Sum_probs=67.0
Q ss_pred ceEEEECCChhHHHHHHHHHH-HHHHhHhhhCcCCCCCcEEEEecCCccccc--------c--ccHHHHHHHHHHHHhCC
Q 045826 223 LHFVVVGGGPTGVEFAAALHD-FVIDDLSKLYPSLKEFTRITLLEAGDHILN--------M--FDKRITASAEEKFKRDG 291 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~-~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--------~--~~~~~~~~~~~~L~~~G 291 (584)
++|+|||||+.|+.+|..|.+ ... ....+.+|+|+++.+.+.. . ....+...+.+.+++.|
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 489999999999999999987 531 0001489999999876542 1 22356677778888899
Q ss_pred cEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 292 IDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 292 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
|+++.+..+ ...+.+.+ ++ +.+|.||+|+|..
T Consensus 76 v~~~~~v~v----~~~v~~~~---~~---~~~d~lViAtG~~ 107 (456)
T 1lqt_A 76 FRFFGNVVV----GEHVQPGE---LS---ERYDAVIYAVGAQ 107 (456)
T ss_dssp EEEEESCCB----TTTBCHHH---HH---HHSSEEEECCCCC
T ss_pred CEEEeeEEE----CCEEEECC---Ce---EeCCEEEEeeCCC
Confidence 999998653 23343332 43 7899999999964
No 287
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.45 E-value=0.00074 Score=69.82 Aligned_cols=54 Identities=13% Similarity=0.198 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCe---EEEEeCCCCeEEEEecceEEEccCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKE---ISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+.+.+.+.+++.|++++.+++|++++ ++. |++.+. ++..++.+|.||.|+|..
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~--~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHN--NEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEET--TEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEEC--CeEEEEEcCEEEECCCcc
Confidence 345667777788899999999999985 343 344332 333359999999999953
No 288
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.44 E-value=0.00038 Score=72.75 Aligned_cols=102 Identities=19% Similarity=0.246 Sum_probs=68.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcE-EEEecCCccccc-----------------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTR-ITLLEAGDHILN----------------------------- 273 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~-V~lv~~~~~il~----------------------------- 273 (584)
+|+|||||++|+-+|..|++.+ .+ |+|+++.+.+.+
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~G--------------~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~ 71 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQAG--------------IGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC
Confidence 8999999999999999999865 45 666665443210
Q ss_pred -----------------------------c---ccHHHHHHHHHHHHh-CC-cEEEeCCceeEEc-CCeEEEE--eCCCC
Q 045826 274 -----------------------------M---FDKRITASAEEKFKR-DG-IDLKTGSMVVKLS-DKEISTK--DRATG 316 (584)
Q Consensus 274 -----------------------------~---~~~~~~~~~~~~L~~-~G-V~v~~~~~V~~v~-~~~v~~~--~~~~G 316 (584)
. ....+.+.+.+.+.+ .| ++++.+++|++++ ++++.+. +..+|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g 151 (410)
T 3c96_A 72 PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHG 151 (410)
T ss_dssp EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCC
Confidence 0 012445566666665 35 6899999999886 3444443 32236
Q ss_pred eEEEEecceEEEccCCCCCchHHHH
Q 045826 317 QISSIPYGMVVWSTGIGTRPVIMDF 341 (584)
Q Consensus 317 ~~~~i~~D~vI~a~G~~~~p~~~~l 341 (584)
+..++.+|.||.|.| ..+.+...
T Consensus 152 ~~~~~~ad~vV~AdG--~~S~vR~~ 174 (410)
T 3c96_A 152 KPQALGADVLVGADG--IHSAVRAH 174 (410)
T ss_dssp CEEEEEESEEEECCC--TTCHHHHH
T ss_pred CceEEecCEEEECCC--ccchhHHH
Confidence 434599999999999 45544443
No 289
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.42 E-value=6.1e-05 Score=79.88 Aligned_cols=69 Identities=14% Similarity=0.258 Sum_probs=49.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc-----ccccCcccccHHHHHHHHHcCCc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT-----NGTVEARSIVEPIRNIVRKKGMD 125 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~-----~g~~~~~~i~~~~~~~~~~~g~~ 125 (584)
.+||+|||||++||+||..|++.|++|+|+|+++..++........ .|..........+.+++++.++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 4799999999999999999999999999999999887765332211 11100011134567788888854
No 290
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.42 E-value=8.6e-05 Score=77.26 Aligned_cols=41 Identities=24% Similarity=0.358 Sum_probs=37.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP 96 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p 96 (584)
..+||+|||||++|+++|..|++.|.+|+|+|+++..++..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 45799999999999999999999999999999998877654
No 291
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.41 E-value=7.6e-05 Score=78.01 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=37.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccC-CCeEEEEcCCCCCCCCCcc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN-SFEVQVVSPRNYFAFTPLL 98 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~-g~~V~lid~~~~~~~~p~~ 98 (584)
.+||+|||||++|+++|..|++. |++|+|+|+++..++....
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 57999999999999999999987 9999999999988876543
No 292
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.41 E-value=0.00073 Score=73.34 Aligned_cols=56 Identities=11% Similarity=0.227 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEc--CC----eEEEEeCCCCeEEEEecceEEEccCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLS--DK----EISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~----~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
..+...+.+.+++.|++++.+++|++++ ++ ++++...+.+...++.+|.||.|.|.
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGN 181 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCC
Confidence 3556677788888999999999999984 44 55544322111235999999999994
No 293
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.40 E-value=9e-05 Score=79.12 Aligned_cols=70 Identities=10% Similarity=0.157 Sum_probs=48.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCC--CeEEEEcCCCCCCCCCccccccc-----cccCcccccHHHHHHHHHcCCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNS--FEVQVVSPRNYFAFTPLLPSVTN-----GTVEARSIVEPIRNIVRKKGMD 125 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g--~~V~lid~~~~~~~~p~~~~~~~-----g~~~~~~i~~~~~~~~~~~g~~ 125 (584)
.++||+|||||++|+++|+.|++.| ++|+|+|+++..++......... |..........+.+++++.++.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~ 79 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLG 79 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCG
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCc
Confidence 4679999999999999999999888 99999999887776433222211 1100111233466777787754
No 294
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.38 E-value=0.00012 Score=78.80 Aligned_cols=69 Identities=19% Similarity=0.195 Sum_probs=48.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCcccccc-----ccccCcccccHHHHHHHHHcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVT-----NGTVEARSIVEPIRNIVRKKGM 124 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~-----~g~~~~~~i~~~~~~~~~~~g~ 124 (584)
.+++|+|||||++||++|..|++.|++|+|+|+++..++........ .|..........+.++++..|+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl 85 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGL 85 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCC
Confidence 35799999999999999999999999999999999888764332211 1110000112456778888874
No 295
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.38 E-value=0.00072 Score=73.53 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=70.1
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc--------c-------------cc------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL--------N-------------MF------ 275 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il--------~-------------~~------ 275 (584)
.+|+|||+|++|+.+|..|.+.+ .+|+++++.+.+. | .+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELG--------------RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 38999999999999999999854 6899998875431 1 00
Q ss_pred ----------cHHHHHHHHHHHHhCC--cEEEeCCceeEEcC--C--eEEEEeCCCCeEEEEecceEEEccCCCCCch
Q 045826 276 ----------DKRITASAEEKFKRDG--IDLKTGSMVVKLSD--K--EISTKDRATGQISSIPYGMVVWSTGIGTRPV 337 (584)
Q Consensus 276 ----------~~~~~~~~~~~L~~~G--V~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~ 337 (584)
.+++.+++....++.+ ++++++++|++++. + ...+.. .+|++ +.+|.||.|+|....|.
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~~--~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT-NHGDR--IRARYLIMASGQLSVPQ 157 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE-TTCCE--EEEEEEEECCCSCCCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE-CCCCE--EEeCEEEECcCCCCCCC
Confidence 1345566666667665 67899999999842 2 344443 45765 89999999999654443
No 296
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.37 E-value=0.00085 Score=73.40 Aligned_cols=93 Identities=23% Similarity=0.265 Sum_probs=65.9
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc-cc-----------------------cc-----
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH-IL-----------------------NM----- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-il-----------------------~~----- 274 (584)
.|+|||||++|+++|..+++.+ .+|.|+++.+. +. +.
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G--------------~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMG--------------AKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 8999999999999999999865 78888887631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecce
Q 045826 275 -------------------------FD-KRITASAEEKFKR-DGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGM 325 (584)
Q Consensus 275 -------------------------~~-~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~ 325 (584)
.+ ..+.+.+.+.+++ .||+++ ++.|+++. ++.+....+.+|.. +.+|.
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~--i~Ada 171 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVE--YKTKA 171 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCE--EECSE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcE--EEeCE
Confidence 00 2345556677777 599994 67899874 45554333345765 99999
Q ss_pred EEEccCCC
Q 045826 326 VVWSTGIG 333 (584)
Q Consensus 326 vI~a~G~~ 333 (584)
||+|+|..
T Consensus 172 VVLATG~~ 179 (637)
T 2zxi_A 172 VVVTTGTF 179 (637)
T ss_dssp EEECCTTC
T ss_pred EEEccCCC
Confidence 99999953
No 297
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.37 E-value=0.00065 Score=73.36 Aligned_cols=55 Identities=15% Similarity=0.228 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCe---EEEEeCCCCeEEEEecceEEEccCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKE---ISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+.+.+.+.+++.||+++.+++|+++. ++. +.+.+ .+|+..++.+|.||.|+|..
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRN-TEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEEC-SSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEe-CCCCEEEEEcCEEEECCCcc
Confidence 455667777888999999999999985 343 44443 45754469999999999953
No 298
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.35 E-value=0.00082 Score=68.95 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 335 (584)
.+.+.+.+.+++.|++++.+++|++++ ++++.+.. .+|+ +.+|.||+|+|....
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~-~~g~---~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIET-ADGE---YQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCE---EEEEEEEECCGGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEE-CCCe---EEcCEEEEcCCccHH
Confidence 455666777888999999999999985 34555544 3453 899999999995443
No 299
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.34 E-value=0.00014 Score=75.57 Aligned_cols=40 Identities=20% Similarity=0.493 Sum_probs=36.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP 96 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p 96 (584)
.++|+|||||++|+++|..|.+.|++|+|+|+++..++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 4699999999999999999999999999999998877653
No 300
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.34 E-value=0.00091 Score=69.74 Aligned_cols=93 Identities=16% Similarity=0.181 Sum_probs=65.1
Q ss_pred ccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc---------------------------
Q 045826 221 KILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN--------------------------- 273 (584)
Q Consensus 221 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~--------------------------- 273 (584)
+..+|+|||||++|+-+|..|++.+ .+|+|+++.+.+-+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~ 87 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSG--------------IDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETF 87 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhh
Confidence 4458999999999999999999865 56666665542200
Q ss_pred -------------------c-----------------ccHHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCC
Q 045826 274 -------------------M-----------------FDKRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRAT 315 (584)
Q Consensus 274 -------------------~-----------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~ 315 (584)
. -...+.+.+.+.+.+ ++++.+++|++++ ++++.+.. .+
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~-~~ 164 (407)
T 3rp8_A 88 GGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWF-TD 164 (407)
T ss_dssp SCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEE-TT
T ss_pred cCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEE-cC
Confidence 0 012334445555555 8899999999984 45666654 44
Q ss_pred CeEEEEecceEEEccCC
Q 045826 316 GQISSIPYGMVVWSTGI 332 (584)
Q Consensus 316 G~~~~i~~D~vI~a~G~ 332 (584)
|++ +.+|+||.|.|.
T Consensus 165 g~~--~~a~~vV~AdG~ 179 (407)
T 3rp8_A 165 GSS--ASGDLLIAADGS 179 (407)
T ss_dssp SCE--EEESEEEECCCT
T ss_pred CCE--EeeCEEEECCCc
Confidence 765 999999999995
No 301
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.34 E-value=0.00058 Score=75.22 Aligned_cols=102 Identities=17% Similarity=0.297 Sum_probs=66.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|+|||||+.|+.+|..|++.|.+|+|+++.. + ++. ...++...+.+.+++.|+++. ....+..+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~-----l~~------~d~~~~~~~~~~l~~~gv~i~-~~~~v~~v 352 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-L-----LRG------FDQQMAEKVGDYMENHGVKFA-KLCVPDEI 352 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-S-----STT------SCHHHHHHHHHHHHHTTCEEE-ETEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-C-----cCc------CCHHHHHHHHHHHHhCCCEEE-ECCeEEEE
Confidence 4689999999999999999999999999999862 1 111 112344556777888886552 23344454
Q ss_pred ec---------CCCEEEEe--ecCccCCCCCceEEEeCCEEEEccCCCCCCC
Q 045826 137 DA---------EKKQIYCR--TTEDRTCGGKEEFALDYDILVIAMGAQANTF 177 (584)
Q Consensus 137 d~---------~~~~v~~~--~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~~ 177 (584)
.. ....+.+. ... + ++..+++|.+|+|+|..|+..
T Consensus 353 ~~~~~~~~~~~~~~~~~v~~~~~~-----g-~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 353 KQLKVVDTENNKPGLLLVKGHYTD-----G-KKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEEECCBTTTTBCCEEEEEEEETT-----S-CEEEEEESEEEECSCEEECGG
T ss_pred EeccccccccCCCceEEEEEEeCC-----C-cEEeccCCEEEEEeCCccccC
Confidence 21 11333332 111 1 123556999999999988753
No 302
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.33 E-value=0.00014 Score=74.65 Aligned_cols=35 Identities=31% Similarity=0.515 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+.||||||||++|+++|+.|++.|++|+|||+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 35799999999999999999999999999999875
No 303
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.33 E-value=0.00014 Score=78.20 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=49.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccc-------cccccCcccccHHHHHHHHHcCCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSV-------TNGTVEARSIVEPIRNIVRKKGMD 125 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~-------~~g~~~~~~i~~~~~~~~~~~g~~ 125 (584)
.+++|+|||||++||++|..|++.|++|+|+|+++..++....... ..|..........+.+++++.|+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~ 108 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLR 108 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCC
Confidence 4679999999999999999999999999999999888775432221 011100011134567888888854
No 304
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.32 E-value=0.00011 Score=78.83 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=37.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL 97 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~ 97 (584)
.+||+|||||++||++|..|++.|++|+|+|+++..++...
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 37999999999999999999999999999999998887654
No 305
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.32 E-value=0.00063 Score=69.14 Aligned_cols=41 Identities=17% Similarity=0.310 Sum_probs=31.6
Q ss_pred HhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccC
Q 045826 288 KRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTG 331 (584)
Q Consensus 288 ~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G 331 (584)
++.|++++++++|++|+ ++++.+.. .+|+. +.+|.||+|++
T Consensus 120 ~~~g~~i~~~~~V~~i~~~~~~~~v~~-~~g~~--~~ad~vV~A~p 162 (342)
T 3qj4_A 120 KESGAEVYFRHRVTQINLRDDKWEVSK-QTGSP--EQFDLIVLTMP 162 (342)
T ss_dssp HHHTCEEESSCCEEEEEECSSSEEEEE-SSSCC--EEESEEEECSC
T ss_pred HhcCCEEEeCCEEEEEEEcCCEEEEEE-CCCCE--EEcCEEEECCC
Confidence 33489999999999995 45566654 34664 79999999997
No 306
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.29 E-value=0.00013 Score=75.26 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=35.8
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP 96 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p 96 (584)
+||+|||||++|+++|..|++.|++|+|+|+++..++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 589999999999999999999999999999998877654
No 307
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.29 E-value=0.00091 Score=68.85 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEE-eCCCCeEEEEecceEEEccCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTK-DRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~-~~~~G~~~~i~~D~vI~a~G~ 332 (584)
.+...+.+...+.|++++.+++++.+. ++.+... ...+|+..++.+|+||-|.|.
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~ 160 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcc
Confidence 344556677778899999999999873 3443322 122355556999999999994
No 308
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.29 E-value=0.00013 Score=85.37 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=68.7
Q ss_pred ccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCc-EEEEecCCcccc-------cc--ccHHHHHHHHHHHHhC
Q 045826 221 KILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFT-RITLLEAGDHIL-------NM--FDKRITASAEEKFKRD 290 (584)
Q Consensus 221 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~-~V~lv~~~~~il-------~~--~~~~~~~~~~~~L~~~ 290 (584)
.+++|+|||||+.|+.+|..|++.+ . +|+|+++.+.+. |. ++....+...+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G--------------~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG--------------YSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--------------CCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 4679999999999999999999865 5 799999987653 21 3455666667888999
Q ss_pred CcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEEccCC
Q 045826 291 GIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 291 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
||++++++.+.. ..+.+.+ +.. +.+|.||+|||.
T Consensus 252 gv~~~~~~~v~~---~~v~~~~---~~~--~~~d~vvlAtGa 285 (1025)
T 1gte_A 252 GVKIICGKSLSE---NEITLNT---LKE--EGYKAAFIGIGL 285 (1025)
T ss_dssp TCEEEESCCBST---TSBCHHH---HHH--TTCCEEEECCCC
T ss_pred CcEEEcccEecc---ceEEhhh---cCc--cCCCEEEEecCC
Confidence 999999987732 2333322 443 789999999996
No 309
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.26 E-value=0.0015 Score=66.22 Aligned_cols=138 Identities=18% Similarity=0.150 Sum_probs=84.7
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-----------------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN----------------------------- 273 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~----------------------------- 273 (584)
..|+|||||++|+-+|..|++.. ++.+|+|+++.+.+..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~------------~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 147 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLR------------PDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPY 147 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHC------------TTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcc
Confidence 38999999999999999998851 1368888887653210
Q ss_pred ---------cccHHHHHHHHHHHHh-CCcEEEeCCceeEEc--C-----------------C--e---EEEEe---CCCC
Q 045826 274 ---------MFDKRITASAEEKFKR-DGIDLKTGSMVVKLS--D-----------------K--E---ISTKD---RATG 316 (584)
Q Consensus 274 ---------~~~~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~-----------------~--~---v~~~~---~~~G 316 (584)
.....+.+.+.+.+.+ .||+++.++.++++. + + . |++.. ..+|
T Consensus 148 ~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g 227 (344)
T 3jsk_A 148 EDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHH 227 (344)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTS
T ss_pred cccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccC
Confidence 0023344556666776 599999999998873 2 1 1 22221 0112
Q ss_pred ------eEEEEecceEEEccCCCCCchHHHH---HHHhCCcC--CC--c--------eeeCCCCccCCCCCEEEeCcccc
Q 045826 317 ------QISSIPYGMVVWSTGIGTRPVIMDF---MKQIGQAN--RR--V--------LATDEWLRVEGCESVYALGDCAT 375 (584)
Q Consensus 317 ------~~~~i~~D~vI~a~G~~~~p~~~~l---~~~~~l~~--~g--~--------i~Vd~~l~~~~~~~VfaiGD~a~ 375 (584)
+..++.++.||.|+|... +....+ +..+++.. .| . ..|+.+-++ +|++|+.|=.+.
T Consensus 228 ~~~~~~d~~~i~Ak~VV~ATG~~s-~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~ 304 (344)
T 3jsk_A 228 DDQSAMDPNTINAPVIISTTGHDG-PFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELS 304 (344)
T ss_dssp SSSSCCBCEEEECSEEEECCCSSS-SSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHH
T ss_pred CcccccCceEEEcCEEEECCCCCc-hhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhH
Confidence 223599999999999533 322222 33445421 11 1 123333333 799999998875
No 310
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.25 E-value=0.00014 Score=75.26 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.2
Q ss_pred CeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRNYF 92 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~~~ 92 (584)
++|+|||||++|+++|..|++. |++|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999977 9999999998764
No 311
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.25 E-value=0.00083 Score=73.44 Aligned_cols=94 Identities=23% Similarity=0.284 Sum_probs=68.1
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc-------------------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL------------------------------- 272 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il------------------------------- 272 (584)
.|+|||||++|+-+|..|++.+ .+|+|+++.+...
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G--------------~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGG--------------VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 8999999999999999999865 6777776543210
Q ss_pred -----------------------c----cccHHHHHHHHHHHHhCCcEEEeCCceeEEcC--CeEEEEeC-CCCeEEEEe
Q 045826 273 -----------------------N----MFDKRITASAEEKFKRDGIDLKTGSMVVKLSD--KEISTKDR-ATGQISSIP 322 (584)
Q Consensus 273 -----------------------~----~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~-~~G~~~~i~ 322 (584)
+ --...+.+.+.+.+++.||+|+.+++|++++. +++++... .+|+ .++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-~~~~ 195 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-YPVR 195 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-EEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-EEEE
Confidence 0 01234566677778888999999999999954 44544321 3462 2499
Q ss_pred cceEEEccCC
Q 045826 323 YGMVVWSTGI 332 (584)
Q Consensus 323 ~D~vI~a~G~ 332 (584)
+|+||.|.|.
T Consensus 196 a~~vV~ADG~ 205 (570)
T 3fmw_A 196 ARYGVGCDGG 205 (570)
T ss_dssp ESEEEECSCS
T ss_pred eCEEEEcCCC
Confidence 9999999994
No 312
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.20 E-value=0.0021 Score=69.14 Aligned_cols=55 Identities=22% Similarity=0.207 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeC-CCCeEEEEecceEEEccCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDR-ATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~-~~G~~~~i~~D~vI~a~G~ 332 (584)
..+.+.+.+.+++.|++++.+++|++++ ++++++... .+|+ .++.+|.||-|.|.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~-~~~~a~~vVgADG~ 164 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGP-RSLTTRYVVGCDGG 164 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCE-EEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCc-EEEEeCEEEEccCc
Confidence 4566677788888899999999999985 345554422 2232 35999999999994
No 313
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.20 E-value=0.00035 Score=75.09 Aligned_cols=95 Identities=19% Similarity=0.319 Sum_probs=65.8
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc----------cc---cHHHHHHHHHHHHh
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN----------MF---DKRITASAEEKFKR 289 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~----------~~---~~~~~~~~~~~L~~ 289 (584)
.+|+|||+|+.|+.+|..|++. .+|+|+++.+.+.. .+ ..++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 4899999999999999998752 58999998876521 11 123333333444 5
Q ss_pred CCcEEEeCCceeEEcCCe--EEEEeCCCCeEEEEecceEEEccCCC
Q 045826 290 DGIDLKTGSMVVKLSDKE--ISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~~~~--v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.||++++++.+.+++.+. +.+...++++..++.+|.+|+|+|..
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 699999999998885432 33332223654458999999999953
No 314
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.20 E-value=0.0017 Score=71.27 Aligned_cols=93 Identities=20% Similarity=0.222 Sum_probs=65.6
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc-cc-----------------------cc-----
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH-IL-----------------------NM----- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~-il-----------------------~~----- 274 (584)
.|+|||||++|+++|..+++.+ .+|.|+++.+. +. +.
T Consensus 23 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~ 88 (641)
T 3cp8_A 23 DVIVVGAGHAGCEAALAVARGG--------------LHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKA 88 (641)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECccHHHHHHHHHHHHCC--------------CcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHH
Confidence 8999999999999999999865 68888887631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecce
Q 045826 275 -------------------------FD-KRITASAEEKFKR-DGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGM 325 (584)
Q Consensus 275 -------------------------~~-~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~ 325 (584)
.+ ..+...+.+.+++ .||+++. ..|+.+. ++.+......+|+. +.+|.
T Consensus 89 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~--i~Ad~ 165 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRA--IQAKA 165 (641)
T ss_dssp HHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCE--EEEEE
T ss_pred HHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcE--EEeCE
Confidence 01 1445566677777 4999965 4888864 55555222345765 99999
Q ss_pred EEEccCCC
Q 045826 326 VVWSTGIG 333 (584)
Q Consensus 326 vI~a~G~~ 333 (584)
||+|+|..
T Consensus 166 VVLATG~~ 173 (641)
T 3cp8_A 166 AILACGTF 173 (641)
T ss_dssp EEECCTTC
T ss_pred EEECcCCC
Confidence 99999954
No 315
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.19 E-value=0.0023 Score=70.21 Aligned_cols=68 Identities=9% Similarity=0.214 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CC-eEE-EEeC-----CCCeE-------EEEecceEEEccCCCCCchH-HH
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DK-EIS-TKDR-----ATGQI-------SSIPYGMVVWSTGIGTRPVI-MD 340 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~-~v~-~~~~-----~~G~~-------~~i~~D~vI~a~G~~~~p~~-~~ 340 (584)
.+.+.+.+.+++.||+|+.+++++++. ++ .+. +... .+|+. .++.+|.||.|.|. ...+ +.
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~--~S~vr~~ 222 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGC--HGHLAKQ 222 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCT--TCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCC--CchHHHH
Confidence 556677788888999999999999984 32 343 3221 13421 24999999999995 4333 34
Q ss_pred HHHHhCC
Q 045826 341 FMKQIGQ 347 (584)
Q Consensus 341 l~~~~~l 347 (584)
+....++
T Consensus 223 l~~~~gl 229 (584)
T 2gmh_A 223 LYKKFDL 229 (584)
T ss_dssp HHHHTTT
T ss_pred HHHHhCC
Confidence 4444454
No 316
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.18 E-value=0.0021 Score=69.09 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeC-CCCeEEEEecceEEEccCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDR-ATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~-~~G~~~~i~~D~vI~a~G~ 332 (584)
..+.+.+.+.+++.|++++.+++|++++ ++++++... .+| ..++.+|.||-|.|.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g-~~~~~a~~vVgADG~ 163 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEG-KHTLRAAYLVGCDGG 163 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTE-EEEEEESEEEECCCT
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCC-CEEEEeCEEEECCCc
Confidence 4556677788888899999999999984 455554321 123 235999999999994
No 317
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.16 E-value=0.0019 Score=72.22 Aligned_cols=54 Identities=19% Similarity=0.134 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCCCC
Q 045826 279 ITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIGTR 335 (584)
Q Consensus 279 ~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 335 (584)
+...+.+.+++.|++++++++|+++. ++++.+.. .+|.+ +.+|.||+|+|....
T Consensus 419 l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~--i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 419 LTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNF-AGDQQ--ATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECCGGGGG
T ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEE-CCCCE--EECCEEEECCCcchh
Confidence 34455566778899999999999984 45665554 34554 999999999996443
No 318
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.14 E-value=0.00042 Score=71.07 Aligned_cols=35 Identities=26% Similarity=0.285 Sum_probs=32.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
|+||+|||||+||+.+|..|++.|++|+|||+++.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 47999999999999999999999999999998863
No 319
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.12 E-value=0.0031 Score=63.43 Aligned_cols=140 Identities=16% Similarity=0.136 Sum_probs=83.2
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc----------------------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM---------------------------- 274 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~---------------------------- 274 (584)
..|+|||+|++|+-+|..|++.. ++.+|+|+++.+.+...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~------------~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 133 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccc
Confidence 38999999999999999998861 13688888875543200
Q ss_pred ----------ccHHHHHHHHHHHHh-CCcEEEeCCceeEEcC------C--eE---EEEe---CCCC------eEEEEec
Q 045826 275 ----------FDKRITASAEEKFKR-DGIDLKTGSMVVKLSD------K--EI---STKD---RATG------QISSIPY 323 (584)
Q Consensus 275 ----------~~~~~~~~~~~~L~~-~GV~v~~~~~V~~v~~------~--~v---~~~~---~~~G------~~~~i~~ 323 (584)
....+...+.+.+.+ .||+++.+++|+++.. + .| ++.. ..+| +..++.+
T Consensus 134 ~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A 213 (326)
T 2gjc_A 134 EDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIEL 213 (326)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEE
T ss_pred ccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEE
Confidence 123344556666666 4999999999998831 2 22 2221 0112 2235899
Q ss_pred ---------------ceEEEccCCCCCchHHHHHHHh---CCcC--CC----------ceeeCCCCccCCCCCEEEeCcc
Q 045826 324 ---------------GMVVWSTGIGTRPVIMDFMKQI---GQAN--RR----------VLATDEWLRVEGCESVYALGDC 373 (584)
Q Consensus 324 ---------------D~vI~a~G~~~~p~~~~l~~~~---~l~~--~g----------~i~Vd~~l~~~~~~~VfaiGD~ 373 (584)
+.||.|+|... |+...+...+ +... .| ...|+.+-...-+|++|+.|-.
T Consensus 214 ~G~~~~~~~~~~~~~~~VV~ATG~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~ 292 (326)
T 2gjc_A 214 AGYKNDGTRDLSQKHGVILSTTGHDG-PFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGME 292 (326)
T ss_dssp SCCCSSSCCCSSTTCCEEEECCCCC---CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHH
T ss_pred eeccccccccccccCCEEEECcCCCc-hHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChH
Confidence 99999999532 3333333322 2111 01 1122222221258999999998
Q ss_pred cc
Q 045826 374 AT 375 (584)
Q Consensus 374 a~ 375 (584)
+.
T Consensus 293 ~~ 294 (326)
T 2gjc_A 293 VA 294 (326)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 320
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.10 E-value=0.00019 Score=73.28 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=30.6
Q ss_pred CeEEEECCcHHHHHHHHhcccCC------CeEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNS------FEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g------~~V~lid~~~ 90 (584)
+||||||||++|+++|+.|++.| .+|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999877 9999999985
No 321
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.10 E-value=0.0027 Score=65.04 Aligned_cols=54 Identities=9% Similarity=0.098 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
..+...+.+.+++.|++++++++|+++. ++++.+.. .+| + +.+|.||+|+|...
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t-~~g-~--i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRC-DAG-S--YRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEEC-SSE-E--EEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEe-CCC-E--EEcCEEEECCChhH
Confidence 3455566777888999999999999984 45555543 335 3 99999999999533
No 322
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.10 E-value=0.0047 Score=63.95 Aligned_cols=51 Identities=24% Similarity=0.269 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
.+...+.+.+++.|++++++++|++++ ++++.+.. .+| + +.+|.||+|+|.
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t-~~g-~--i~a~~VV~A~G~ 206 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTT-DRG-T--YRAGKVVLACGP 206 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-SSC-E--EEEEEEEECCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEE-CCC-E--EEcCEEEEcCCc
Confidence 344556677788999999999999985 45566554 334 3 899999999994
No 323
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.09 E-value=0.0018 Score=69.61 Aligned_cols=56 Identities=20% Similarity=0.166 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEcC--C--eEEEEeCCCCeEEEEecceEEEccCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLSD--K--EISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
..+...+.+.+++.|++++++++|+++.. + +|++.+..+|+..++.+|.||.|+|.
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~ 208 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGP 208 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCCh
Confidence 34556677778889999999999999853 2 24444334576445999999999994
No 324
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.09 E-value=0.00031 Score=75.34 Aligned_cols=42 Identities=14% Similarity=0.032 Sum_probs=37.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCC-CeEEEEcCCCCCCCCCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNS-FEVQVVSPRNYFAFTPL 97 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g-~~V~lid~~~~~~~~p~ 97 (584)
..++|+|||||++|+++|..|++.| .+|+|+|+++..++...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeee
Confidence 3579999999999999999999888 79999999988776543
No 325
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.09 E-value=0.0013 Score=73.37 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=64.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEE-------------------------------------EcCCCCCCCCCcc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQV-------------------------------------VSPRNYFAFTPLL 98 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~l-------------------------------------id~~~~~~~~p~~ 98 (584)
..++|+|||||+.|+.+|..|++.|.+|++ +++.+...
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l----- 567 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKP----- 567 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCT-----
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhh-----
Confidence 357999999999999999999987765543 22221100
Q ss_pred ccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEEecCCCEEEEe-ecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 99 PSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCR-TTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 99 ~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
...+ .......+...+++.|+++ +...+++.++.+ .+.+. ++ +..++++|.+|+|+|..|+.
T Consensus 568 ----~~~l-~~~~~~~~~~~l~~~GV~v-~~~~~v~~i~~~--~v~~~~~G--------~~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 568 ----GQGL-GKTTGWIHRTTLLSRGVKM-IPGVSYQKIDDD--GLHVVING--------ETQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp ----TTTS-CTTTHHHHHHHHHHTTCEE-ECSCEEEEEETT--EEEEEETT--------EEEEECCSEEEECCCEEECC
T ss_pred ----cccc-ccccHHHHHHHHHhcCCEE-EeCcEEEEEeCC--eEEEecCC--------eEEEEeCCEEEECCCccccH
Confidence 0011 1122334567778888655 335678888754 45553 22 12489999999999998763
No 326
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.08 E-value=0.00066 Score=70.23 Aligned_cols=86 Identities=22% Similarity=0.469 Sum_probs=63.5
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc----------------------c-c-------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI----------------------L-N------- 273 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i----------------------l-~------- 273 (584)
+|+|||||++|+.+|..|++.. ++.+|+|+++.+.+ . .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~------------~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQAR------------PLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNP 69 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCC
T ss_pred eEEEECCCHHHHHHHHHHHhcC------------CCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhh
Confidence 7999999999999999999861 12566666654322 0 0
Q ss_pred -------------------------cccHHHHHHHHHHHHhCCcEEEeCCceeEEcCCeEEEEeCCCCeEEEEecceEEE
Q 045826 274 -------------------------MFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVW 328 (584)
Q Consensus 274 -------------------------~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~ 328 (584)
.....+.+.+.+.+++.||+++++++|++++.. +. +.+|.||.
T Consensus 70 ~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------~~--~~ad~vV~ 137 (381)
T 3c4a_A 70 QFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------PL--ADYDLVVL 137 (381)
T ss_dssp EEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------CG--GGCSEEEE
T ss_pred ccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------cc--ccCCEEEE
Confidence 012456777888888889999999999988642 11 68999999
Q ss_pred ccCCC
Q 045826 329 STGIG 333 (584)
Q Consensus 329 a~G~~ 333 (584)
|.|..
T Consensus 138 AdG~~ 142 (381)
T 3c4a_A 138 ANGVN 142 (381)
T ss_dssp CCGGG
T ss_pred CCCCC
Confidence 99953
No 327
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.08 E-value=0.00039 Score=73.42 Aligned_cols=42 Identities=24% Similarity=0.335 Sum_probs=38.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCc
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPL 97 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~ 97 (584)
..++|+|||+|++|+++|..|++.|++|+|+|++++.++...
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 46 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESS 46 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccc
Confidence 357999999999999999999999999999999998887644
No 328
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.08 E-value=0.00068 Score=78.85 Aligned_cols=98 Identities=13% Similarity=0.153 Sum_probs=68.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEEEE
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKI 136 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~~i 136 (584)
.++|||||+|+.|+.+|..|++.|.+|+||++.+.+.. . .+.+++.|+++ +....+..|
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~---------------~-----~~~l~~~GV~v-~~~~~v~~i 342 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA---------------A-----AAQAVADGVQV-ISGSVVVDT 342 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH---------------H-----HHHHHHTTCCE-EETEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch---------------h-----HHHHHhCCeEE-EeCCEeEEE
Confidence 36899999999999999999999999999999875320 0 34567788776 346678888
Q ss_pred ec--CCC--EEEEeecCccCCCCCceEEEeCCEEEEccCCCCCC
Q 045826 137 DA--EKK--QIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 137 d~--~~~--~v~~~~~~~~~~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
.. +++ .|.+.+.+.... +.+..++.+|.||+|+|..|+.
T Consensus 343 ~~~~~~~v~~v~~~~~~~~~~-~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 343 EADENGELSAIVVAELDEARE-LGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp EECTTSCEEEEEEEEECTTCC-EEEEEEEECSEEEEECCEEECC
T ss_pred eccCCCCEEEEEEEeccccCC-CCceEEEEcCEEEECCCcCcCh
Confidence 76 343 455554000000 0112489999999999988764
No 329
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.06 E-value=0.0015 Score=67.97 Aligned_cols=94 Identities=14% Similarity=0.178 Sum_probs=62.1
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccc-----c--c-c---HHH------------
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILN-----M--F-D---KRI------------ 279 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~-----~--~-~---~~~------------ 279 (584)
.+|+|||||++|+.+|..|++.+ .+|+|+++.+.+.. . + + ..+
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNG--------------IDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 38999999999999999998754 78888887653211 0 0 0 000
Q ss_pred ----------------------------------HHHHHHHHHhC--CcEEEeCCceeEEc--CCeEEEEeCCCCeEEEE
Q 045826 280 ----------------------------------TASAEEKFKRD--GIDLKTGSMVVKLS--DKEISTKDRATGQISSI 321 (584)
Q Consensus 280 ----------------------------------~~~~~~~L~~~--GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i 321 (584)
...+.+.|.+. +++++++++|++++ ++++.+.. .+|++ +
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~ 169 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTF-ENKPS--E 169 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEE-TTSCC--E
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEE-CCCcE--E
Confidence 01122223221 36789999999985 34565554 34764 8
Q ss_pred ecceEEEccCCC
Q 045826 322 PYGMVVWSTGIG 333 (584)
Q Consensus 322 ~~D~vI~a~G~~ 333 (584)
.+|.||.|.|..
T Consensus 170 ~ad~vV~AdG~~ 181 (398)
T 2xdo_A 170 TADLVILANGGM 181 (398)
T ss_dssp EESEEEECSCTT
T ss_pred ecCEEEECCCcc
Confidence 999999999953
No 330
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.05 E-value=0.00047 Score=76.88 Aligned_cols=42 Identities=24% Similarity=0.368 Sum_probs=38.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP 96 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p 96 (584)
...++|+|||||++|+++|..|.+.|++|+|+|+++..++..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 456899999999999999999999999999999998877753
No 331
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.05 E-value=0.00091 Score=75.42 Aligned_cols=106 Identities=16% Similarity=0.263 Sum_probs=69.5
Q ss_pred CCeEEEEC--CcHHHHHHHHhcccCCCeEEEEcCCCCCCCCCccccccccccCcccccHHHHHHHHHcCCcEEEEEEEEE
Q 045826 57 KKKVVVLG--TGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECY 134 (584)
Q Consensus 57 ~~~VVIVG--gG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p~~~~~~~g~~~~~~i~~~~~~~~~~~g~~v~~~~~~v~ 134 (584)
.++||||| ||+.|+.+|..|++.|.+|+||++.+ +.. ... ... . ...+.+.+++.|+++ +...++.
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~-----~~~---~~~-~-~~~~~~~l~~~GV~i-~~~~~v~ 595 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN-----YMH---FTL-E-YPNMMRRLHELHVEE-LGDHFCS 595 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH-----HHH---HTT-C-HHHHHHHHHHTTCEE-ECSEEEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc-----ccc---ccc-c-HHHHHHHHHhCCCEE-EcCcEEE
Confidence 46999999 99999999999999999999999886 221 000 000 1 345667777888655 2356788
Q ss_pred EEecCCCEEEEeec--Cc-cC----------CCCCceEEEeCCEEEEccCCCCCC
Q 045826 135 KIDAEKKQIYCRTT--ED-RT----------CGGKEEFALDYDILVIAMGAQANT 176 (584)
Q Consensus 135 ~id~~~~~v~~~~~--~~-~~----------~~~~~~~~i~yD~LVlAtGs~~~~ 176 (584)
.|+.+ .+.+... .+ .. ..+..++.+.+|.||+|+|..|+.
T Consensus 596 ~i~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 596 RIEPG--RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEETT--EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEECC--eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 88865 3433321 10 00 001123459999999999988753
No 332
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.04 E-value=0.00051 Score=78.28 Aligned_cols=42 Identities=24% Similarity=0.368 Sum_probs=38.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTP 96 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~p 96 (584)
...++|+|||||++||++|..|++.|++|+|+|+++..++..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 456899999999999999999999999999999999887753
No 333
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.00 E-value=0.0037 Score=67.33 Aligned_cols=54 Identities=20% Similarity=0.140 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEcC---C---eEEEEeCCCCeEEEEecc-eEEEccCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLSD---K---EISTKDRATGQISSIPYG-MVVWSTGIG 333 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~---~v~~~~~~~G~~~~i~~D-~vI~a~G~~ 333 (584)
.+.+.+.+.+++.||+|+++++|+++.. + +|.+.+ +|+..++.+| .||+|+|-.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCCh
Confidence 5566677778889999999999999842 2 344443 3555569996 999999943
No 334
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.98 E-value=0.005 Score=63.69 Aligned_cols=34 Identities=24% Similarity=0.440 Sum_probs=28.8
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH 270 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 270 (584)
.+|+|||||++|+-+|..|++.+ .+|+|+|+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G--------------~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG--------------IKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--------------CCEEEEecCCC
Confidence 38999999999999999999865 77888876553
No 335
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.96 E-value=0.00042 Score=73.64 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEcC---CeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLSD---KEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.++.+.+.+.+++.|++++++++|++|.. +.++...+.+|+. +.||.||.++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcE--EECCEEEECCCcc
Confidence 46788888999999999999999999843 3444333345775 9999999999965
No 336
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.90 E-value=0.00053 Score=77.56 Aligned_cols=41 Identities=22% Similarity=0.407 Sum_probs=36.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFT 95 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~ 95 (584)
...++|+|||||++|+++|..|++.|++|+|+|+++..++.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 44689999999999999999999999999999998877763
No 337
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.89 E-value=0.0039 Score=64.91 Aligned_cols=51 Identities=16% Similarity=0.195 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhCCcEEEeCCcee---------EEcC--CeEEEEeCCCCeEEEEecceEEEccCCC
Q 045826 279 ITASAEEKFKRDGIDLKTGSMVV---------KLSD--KEISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 279 ~~~~~~~~L~~~GV~v~~~~~V~---------~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
+...+.+.+++.|++++.+++|+ ++.. +.+.+. +.+| ++.+|.||.|+|..
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~-~~~g---~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVV-HETR---QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------C-BCCE---EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEE-ECCc---EEECCEEEECCCcc
Confidence 55666777888999999999999 8753 334332 2334 39999999999953
No 338
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.86 E-value=0.00062 Score=72.59 Aligned_cols=41 Identities=17% Similarity=0.300 Sum_probs=36.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCCCCCCCCc
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRNYFAFTPL 97 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~~~~~~p~ 97 (584)
.++|+|||||++|+++|..|.+.|+ +|+|+|+++..++...
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCcee
Confidence 5799999999999999999999998 8999999988777543
No 339
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.74 E-value=0.0054 Score=66.67 Aligned_cols=52 Identities=19% Similarity=0.242 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEE--EeCCCCeEEEEecceEEEccCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKEIST--KDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~--~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
.+.+.+.+.+++. ++.+++|++++ ++++++ .+..+|+..++.+|.||.|.|.
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~ 194 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGA 194 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCC
Confidence 4455666666665 88999999985 345543 3333465446999999999994
No 340
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.64 E-value=0.0062 Score=65.39 Aligned_cols=109 Identities=22% Similarity=0.231 Sum_probs=70.0
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc-------ccc----------------------
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI-------LNM---------------------- 274 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i-------l~~---------------------- 274 (584)
.|+|||+||+|+-+|..|.+.+...+..............++++.+.+ +|.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 699999999999999999886532221111111122344455443321 110
Q ss_pred ----------------------ccHHHHHHHHHHHHhCCcEEEeCCceeEEcC---C---------eEEEEeCCCCeEEE
Q 045826 275 ----------------------FDKRITASAEEKFKRDGIDLKTGSMVVKLSD---K---------EISTKDRATGQISS 320 (584)
Q Consensus 275 ----------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~---------~v~~~~~~~G~~~~ 320 (584)
...++.+|+....++.+..++.+++|++|+. + .|+..+..+|+..+
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 1235667777777777888999999999842 1 15555555677667
Q ss_pred EecceEEEccCC
Q 045826 321 IPYGMVVWSTGI 332 (584)
Q Consensus 321 i~~D~vI~a~G~ 332 (584)
+.++.||+|+|.
T Consensus 201 ~~ar~vVlatG~ 212 (501)
T 4b63_A 201 RRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEEECCCC
T ss_pred EEeCEEEECcCC
Confidence 999999999993
No 341
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.57 E-value=0.011 Score=63.94 Aligned_cols=53 Identities=11% Similarity=0.143 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce-E-EEEeCCCCeEEEEecceEEEccCCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLSD--KE-I-STKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~-v-~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+.+.+.+.+++.||+++.+ +|++++. ++ + .+.. .+|++ +.+|.||.|+|...
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~-~~g~~--i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLT-KEGRT--LEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE-TTSCE--ECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEE-CCCcE--EEeCEEEECCCCch
Confidence 34455667777889999999 8999853 33 2 3332 44754 99999999999643
No 342
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.52 E-value=0.0014 Score=72.69 Aligned_cols=35 Identities=14% Similarity=0.333 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcc---c-CCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILK---S-NSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~---~-~g~~V~lid~~~~ 91 (584)
..||||||||+||+++|..|+ + .|.+|+||||.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999999 6 8999999999863
No 343
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.39 E-value=0.0011 Score=73.64 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=33.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCC--------CeEEEEcCCC-CC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNS--------FEVQVVSPRN-YF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g--------~~V~lid~~~-~~ 92 (584)
+++|+|||||++||++|+.|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 579999999999999999999877 9999999998 77
No 344
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.31 E-value=0.0021 Score=69.90 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=33.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
..+|+||||+|++|+.+|.+|.+.|++|+|+|+.+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999864
No 345
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.23 E-value=0.0025 Score=68.78 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhccc-CCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS-NSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid~~~~ 91 (584)
.+|+||||||+||..+|.+|++ .+++|.|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5899999999999999999996 7899999999864
No 346
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.14 E-value=0.021 Score=60.70 Aligned_cols=52 Identities=15% Similarity=0.160 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhCCcEEEeCCceeEEc--CCeEEE--EeCCCCeEEEEecceEEEccCCC
Q 045826 278 RITASAEEKFKRDGIDLKTGSMVVKLS--DKEIST--KDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 278 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~--~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+.+.+.+.+++.||+++.++.+ ++. ++.+.. ....+|+ +.+|.||+|+|..
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~---~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV---EDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEE---CCCSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCe---EEeeeEEECCCCC
Confidence 34455566667789999999999 883 344421 1112232 7799999999953
No 347
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.87 E-value=0.044 Score=59.43 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhC-CcEEEeCCceeEEc--CCe--EEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 278 RITASAEEKFKRD-GIDLKTGSMVVKLS--DKE--ISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 278 ~~~~~~~~~L~~~-GV~v~~~~~V~~v~--~~~--v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
.+.+.+.+.+++. ||+++.+ +|++++ +++ +.+.. .+|++ +.+|.||.|+|...
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~-~~G~~--i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRT-ATGRV--FDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEE-TTSCE--EECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEE-CCCCE--EECCEEEECCCCch
Confidence 4566677778887 9999999 999985 233 33333 44764 99999999999533
No 348
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.76 E-value=0.0044 Score=67.17 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
..+|+||||||.||+.+|.+|.+ |.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 35899999999999999999999 999999999875
No 349
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.74 E-value=0.0063 Score=66.41 Aligned_cols=36 Identities=28% Similarity=0.291 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCC-CeEEEEcCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNS-FEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g-~~V~lid~~~~ 91 (584)
..+|+||||||.||+.+|.+|.+.+ .+|.|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3589999999999999999999776 79999999875
No 350
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.55 E-value=0.0087 Score=64.36 Aligned_cols=38 Identities=18% Similarity=0.310 Sum_probs=34.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
...+|++|||+|++|+.+|.+|.+.+.+|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 34589999999999999999999999999999998753
No 351
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.55 E-value=0.043 Score=59.10 Aligned_cols=52 Identities=13% Similarity=0.119 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHh-CCcEEEeCCceeEEcC--Ce-E-EEEeCCCCeEEEEecceEEEccCCC
Q 045826 278 RITASAEEKFKR-DGIDLKTGSMVVKLSD--KE-I-STKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 278 ~~~~~~~~~L~~-~GV~v~~~~~V~~v~~--~~-v-~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
.+.+.+.+.+++ .||+++.+ .|++++. ++ + .+.. .+|.+ +.+|.||.|+|..
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~-~~g~~--i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLIT-KQNGE--ISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEE-SSSCE--EECSEEEECSGGG
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEE-CCCCE--EEcCEEEECCCcc
Confidence 345556677777 89999999 5999852 33 2 3332 34654 9999999999964
No 352
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.51 E-value=0.013 Score=51.14 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=32.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+.+|+|+|.|.-|..+|..|.+.|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 345789999999999999999999999999999864
No 353
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.48 E-value=0.0082 Score=65.51 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhccc-CCCeEEEEcCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKS-NSFEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid~~~~ 91 (584)
..+|+||||||.||+.+|.+|.+ .+.+|.|||+.++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~ 54 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSY 54 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 45899999999999999999995 6899999999873
No 354
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.48 E-value=0.0078 Score=64.66 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=33.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFA 93 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~ 93 (584)
.+|++|||+|++|+.+|.+|.+.|.+|+|||+.+.+.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987554
No 355
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.45 E-value=0.075 Score=56.90 Aligned_cols=53 Identities=13% Similarity=0.079 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHhCCcEEEeCCceeEEcC--Ce--EEEEeCCCCeEEEEecceEEEccCCC
Q 045826 277 KRITASAEEKFKRDGIDLKTGSMVVKLSD--KE--ISTKDRATGQISSIPYGMVVWSTGIG 333 (584)
Q Consensus 277 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vI~a~G~~ 333 (584)
..+.+.+.+.+++.||+++.+ +|++++. ++ +.+.. .+|++ +.+|.||.|+|..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~-~~g~~--~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT-KQHGE--ISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE-SSSCE--EECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE-CCCCE--EEcCEEEECCCcc
Confidence 455566777788899999999 8999853 33 33333 44754 9999999999953
No 356
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.20 E-value=0.012 Score=64.55 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=33.7
Q ss_pred CCCeEEEECCcHHHHHHHHhccc-CCCeEEEEcCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKS-NSFEVQVVSPRNYF 92 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid~~~~~ 92 (584)
..+|++|||+|++|+.+|.+|.+ .+.+|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45799999999999999999998 89999999998754
No 357
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.10 E-value=0.009 Score=65.02 Aligned_cols=36 Identities=25% Similarity=0.216 Sum_probs=32.8
Q ss_pred CCeEEEECCcHHHHHHHHhccc-CCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKS-NSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~-~g~~V~lid~~~~~ 92 (584)
.+|+||||||.||+.+|.+|.+ .+.+|.|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3799999999999999999997 79999999998754
No 358
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.08 E-value=0.018 Score=51.10 Aligned_cols=35 Identities=29% Similarity=0.462 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
...+|+|+|+|.-|..+|..|...|++|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35789999999999999999999999999999874
No 359
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.03 E-value=0.038 Score=55.70 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHH-HHHhcccCCCeEEEEcCCCC
Q 045826 56 KKKKVVVLGTGWAGTT-FLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~-aA~~L~~~g~~V~lid~~~~ 91 (584)
.+++|.|||.|-+|++ +|..|.+.|++|++.|.++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4689999999999997 78888899999999998753
No 360
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.94 E-value=0.02 Score=50.59 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=31.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
..++|+|+|+|..|...+..|.+.|++|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3568999999999999999999999999999986
No 361
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.89 E-value=0.017 Score=55.03 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=30.9
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI 271 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 271 (584)
.|+|||+||+|+-+|..|++.+ .+|+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G--------------~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCC
Confidence 6999999999999999999865 899999988765
No 362
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=94.88 E-value=0.14 Score=57.86 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=31.1
Q ss_pred CCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccC
Q 045826 290 DGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTG 331 (584)
Q Consensus 290 ~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G 331 (584)
.|++|+++++|++|+ ++++.+.. .+|+. +.+|.||+|++
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~-~~G~~--i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTT-TDGTG--YSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEE-TTCCE--EEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEE-CCCcE--EEcCEEEECCC
Confidence 378999999999996 45677664 44665 99999999996
No 363
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.84 E-value=0.02 Score=49.72 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
+++|+|+|+|.-|..+|..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 578999999999999999999999999999986
No 364
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.83 E-value=0.018 Score=62.38 Aligned_cols=37 Identities=22% Similarity=0.281 Sum_probs=33.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcccC-CCeEEEEcCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSN-SFEVQVVSPRNYF 92 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~-g~~V~lid~~~~~ 92 (584)
..+|++|||+|.+|+.+|.+|.+. +.+|+|+|+.+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 357999999999999999999986 8999999998653
No 365
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.68 E-value=0.026 Score=48.59 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=30.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
.++|+|+|+|.-|..+|..|.+.|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 358999999999999999999999999999975
No 366
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.59 E-value=0.024 Score=47.12 Aligned_cols=33 Identities=27% Similarity=0.497 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCC-CeEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNS-FEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g-~~V~lid~~ 89 (584)
+++|+|+|+|..|..++..|...| ++|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999889 999999986
No 367
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=94.18 E-value=0.022 Score=58.42 Aligned_cols=32 Identities=31% Similarity=0.348 Sum_probs=28.8
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGD 269 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 269 (584)
.|+|||||+.|+++|..+++.+ .+|.|+++.+
T Consensus 3 dViVIGgG~AG~~AA~~la~~G--------------~~V~liE~~~ 34 (443)
T 3g5s_A 3 RVNVVGAGLAGSEAAWTLLRLG--------------VPVRLFEMRP 34 (443)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECCTT
T ss_pred CEEEECchHHHHHHHHHHHHCC--------------CcEEEEeccC
Confidence 7999999999999999999865 7999998765
No 368
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=93.99 E-value=0.14 Score=56.60 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=35.5
Q ss_pred HHHHHHhC-Cc-EEEeCCceeEEc--CC---eE---EEEeCCCCeEEEEecceEEEccCCCC
Q 045826 283 AEEKFKRD-GI-DLKTGSMVVKLS--DK---EI---STKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 283 ~~~~L~~~-GV-~v~~~~~V~~v~--~~---~v---~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
+.+.+++. || +++.++.|+++. ++ .+ ...+..+|+...+.++.||+|+|-..
T Consensus 157 l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 157 IAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 33444555 89 999999999883 34 43 33333457655689999999999533
No 369
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.63 E-value=0.053 Score=59.49 Aligned_cols=40 Identities=23% Similarity=0.338 Sum_probs=37.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFT 95 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~~ 95 (584)
+.+||+|||+|..|-.+|..|++.|.+|.+||+++++++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 3689999999999999999999999999999999988764
No 370
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.63 E-value=0.056 Score=51.11 Aligned_cols=34 Identities=29% Similarity=0.410 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
..++|+|||||..|...+..|.+.|.+|+||+++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4679999999999999999999999999999975
No 371
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.60 E-value=0.042 Score=47.38 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|+|+|+|.-|..++..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999763
No 372
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.01 E-value=0.053 Score=52.91 Aligned_cols=35 Identities=31% Similarity=0.470 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|+|||||-.|...+..|.+.|++|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35799999999999999999999999999999864
No 373
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.81 E-value=0.073 Score=48.42 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccC-CCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSN-SFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~-g~~V~lid~~~ 90 (584)
...+|+|+|+|.-|..+|..|.+. |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 356899999999999999999988 99999999863
No 374
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.75 E-value=0.093 Score=52.05 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999999999999999874
No 375
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=92.72 E-value=0.053 Score=54.38 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=48.0
Q ss_pred cceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-------cc-HHHHHHHHHHHHhCCcE
Q 045826 222 ILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-------FD-KRITASAEEKFKRDGID 293 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-------~~-~~~~~~~~~~L~~~GV~ 293 (584)
...|+|||+||.|+-+|..|++.. .+.+|+++++.+.+... ++ ..+...+.+.+++.||+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r------------~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhC------------CCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCE
Confidence 348999999999999999997631 24899999998765321 00 11112344567788999
Q ss_pred EEeCCceeEE
Q 045826 294 LKTGSMVVKL 303 (584)
Q Consensus 294 v~~~~~V~~v 303 (584)
+..+......
T Consensus 133 ~~~~~~~~~~ 142 (326)
T 3fpz_A 133 YEDEGDYVVV 142 (326)
T ss_dssp CEECSSEEEE
T ss_pred EEECCcceec
Confidence 8887655443
No 376
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.62 E-value=0.25 Score=51.97 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=54.5
Q ss_pred ccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCce
Q 045826 221 KILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMV 300 (584)
Q Consensus 221 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V 300 (584)
.+++|.|||.|.+|+-+|..|.+.+ .+|+..+..+... ++ ..+.|++.||+++.+...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--------------~~V~~~D~~~~~~---~~-----~~~~L~~~gi~~~~g~~~ 65 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--------------AIVTVNDGKPFDE---NP-----TAQSLLEEGIKVVCGSHP 65 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--------------CEEEEEESSCGGG---CH-----HHHHHHHTTCEEEESCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEeCCcccC---Ch-----HHHHHHhCCCEEEECCCh
Confidence 4679999999999999988888765 8999998865311 12 235788899999887542
Q ss_pred eEEcCCeEEEEeCCCCeEEEEe-cceEEEccCCCC
Q 045826 301 VKLSDKEISTKDRATGQISSIP-YGMVVWSTGIGT 334 (584)
Q Consensus 301 ~~v~~~~v~~~~~~~G~~~~i~-~D~vI~a~G~~~ 334 (584)
..+. -. +|.||.++|+.+
T Consensus 66 ~~~~----------------~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 66 LELL----------------DEDFCYMIKNPGIPY 84 (451)
T ss_dssp GGGG----------------GSCEEEEEECTTSCT
T ss_pred HHhh----------------cCCCCEEEECCcCCC
Confidence 1110 12 688999999744
No 377
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.28 E-value=0.078 Score=55.71 Aligned_cols=35 Identities=23% Similarity=0.423 Sum_probs=32.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
.++|+|||.|.+|+++|..|.+.|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 46899999999999999999999999999998764
No 378
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.25 E-value=0.11 Score=53.01 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=33.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYF 92 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~ 92 (584)
||+|+|||||..|..+++.+++.|++|+++|+++..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 689999999999999999999999999999987653
No 379
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.19 E-value=0.068 Score=56.91 Aligned_cols=36 Identities=28% Similarity=0.276 Sum_probs=29.6
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL 272 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il 272 (584)
|+|+|||+|..|+-+|..|++.+ .+|+|+|+.+++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G--------------~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAG--------------IPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--------------CCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CcEEEEccCCCCC
Confidence 59999999999999999999865 7999999988764
No 380
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.93 E-value=0.097 Score=49.13 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=30.4
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++|+|+|+|.-|..+|..|.+.|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 379999999999999999999999999999763
No 381
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.78 E-value=0.15 Score=44.31 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
.++|+|||+|..|...+..|...|++|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 478999999999999999999899999999976
No 382
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.72 E-value=0.11 Score=54.74 Aligned_cols=35 Identities=29% Similarity=0.352 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|.|||.|.+|+++|..|.+.|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45799999999999999999999999999999875
No 383
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.58 E-value=0.38 Score=48.21 Aligned_cols=74 Identities=18% Similarity=0.145 Sum_probs=52.2
Q ss_pred cceEEEECCChhHHH-HHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCce
Q 045826 222 ILHFVVVGGGPTGVE-FAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMV 300 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE-~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V 300 (584)
.++|.|||.|.+|+. +|..|.+.+ .+|++.+..+.. + ..+.|++.||+++.+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G--------------~~V~~~D~~~~~-----~-----~~~~L~~~gi~v~~g~~~ 59 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG--------------FEVSGCDAKMYP-----P-----MSTQLEALGIDVYEGFDA 59 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT--------------CEEEEEESSCCT-----T-----HHHHHHHTTCEEEESCCG
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC--------------CEEEEEcCCCCc-----H-----HHHHHHhCCCEEECCCCH
Confidence 359999999999997 777777754 899999886531 1 235678889999876432
Q ss_pred eEEcCCeEEEEeCCCCeEEEEecceEEEccCCCC
Q 045826 301 VKLSDKEISTKDRATGQISSIPYGMVVWSTGIGT 334 (584)
Q Consensus 301 ~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 334 (584)
..+.. -.+|+||.++|+.+
T Consensus 60 ~~l~~---------------~~~d~vV~Spgi~~ 78 (326)
T 3eag_A 60 AQLDE---------------FKADVYVIGNVAKR 78 (326)
T ss_dssp GGGGS---------------CCCSEEEECTTCCT
T ss_pred HHcCC---------------CCCCEEEECCCcCC
Confidence 11100 14789999999744
No 384
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.52 E-value=0.16 Score=49.90 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35799999999999999999999999999999874
No 385
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.39 E-value=0.16 Score=52.33 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+|+|||+|..|+.+|..+...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4699999999999999999999999999999875
No 386
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.23 E-value=0.13 Score=54.25 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.++|+|+|+|--|.+.|..|...|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4589999999999999999999999999999873
No 387
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.85 E-value=0.15 Score=52.07 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
...+|||+|||.||+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45799999999999999999998898 999999873
No 388
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=90.54 E-value=0.21 Score=53.09 Aligned_cols=60 Identities=23% Similarity=0.252 Sum_probs=44.5
Q ss_pred cceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccc----------c--------HHHHHHH
Q 045826 222 ILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMF----------D--------KRITASA 283 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~----------~--------~~~~~~~ 283 (584)
..+|+|||||.+|+.+|..|.+.+ .+|+|+++.+++.+.. . +.....+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g--------------~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 98 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAG--------------HQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIV 98 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHT--------------CEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHH
Confidence 458999999999999999999865 7999999988765421 0 0113456
Q ss_pred HHHHHhCCcEEE
Q 045826 284 EEKFKRDGIDLK 295 (584)
Q Consensus 284 ~~~L~~~GV~v~ 295 (584)
.+.+++.|+++.
T Consensus 99 ~~~~~~~g~~~~ 110 (498)
T 2iid_A 99 REYIRKFDLRLN 110 (498)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHhCCCce
Confidence 677788888654
No 389
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=90.49 E-value=0.18 Score=55.14 Aligned_cols=33 Identities=27% Similarity=0.549 Sum_probs=29.7
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCc
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGD 269 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 269 (584)
..|+|||||++|+-+|..|++.+ .+|+|+++.+
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G--------------~~V~LiEr~~ 56 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLG--------------HDVTIYERSA 56 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHcCC--------------CCEEEEcCCC
Confidence 48999999999999999999854 8999999875
No 390
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.46 E-value=0.16 Score=51.82 Aligned_cols=34 Identities=26% Similarity=0.233 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5799999999999999999999999999999874
No 391
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.40 E-value=0.21 Score=49.83 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~ 90 (584)
+++|+|||+|..|...|..|...|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999998898 999999863
No 392
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.30 E-value=0.16 Score=50.68 Aligned_cols=34 Identities=21% Similarity=0.490 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+|.|||+|.-|-..|..++..|++|+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 393
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.30 E-value=0.21 Score=49.48 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=30.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
+++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 468999999999999999999999999999976
No 394
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.28 E-value=0.32 Score=45.89 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=63.2
Q ss_pred hccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCc
Q 045826 220 KKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSM 299 (584)
Q Consensus 220 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~ 299 (584)
-.+++|+|||||.+|...+..|.+.+ .+|+++.+. +.+++ .+..++.+|+++...-
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~G--------------A~VtVvap~------~~~~l----~~l~~~~~i~~i~~~~ 84 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEG--------------AAITVVAPT------VSAEI----NEWEAKGQLRVKRKKV 84 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGC--------------CCEEEECSS------CCHHH----HHHHHTTSCEEECSCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC------CCHHH----HHHHHcCCcEEEECCC
Confidence 35679999999999999999988754 799999753 23443 2333445676653211
Q ss_pred eeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCCcCCCceeeCC----CCccCCCCCEEEeCcccc
Q 045826 300 VVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDE----WLRVEGCESVYALGDCAT 375 (584)
Q Consensus 300 V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l~~~g~i~Vd~----~l~~~~~~~VfaiGD~a~ 375 (584)
.. +.. -.+|+||.||| .+.+........ .. +|.||- .+-.--.|-|+--||..-
T Consensus 85 -----------~~---~dL--~~adLVIaAT~---d~~~N~~I~~~a--k~-gi~VNvvD~p~~~~f~~Paiv~rg~l~i 142 (223)
T 3dfz_A 85 -----------GE---EDL--LNVFFIVVATN---DQAVNKFVKQHI--KN-DQLVNMASSFSDGNIQIPAQFSRGRLSL 142 (223)
T ss_dssp -----------CG---GGS--SSCSEEEECCC---CTHHHHHHHHHS--CT-TCEEEC-----CCSEECCEEEEETTEEE
T ss_pred -----------CH---hHh--CCCCEEEECCC---CHHHHHHHHHHH--hC-CCEEEEeCCcccCeEEEeeEEEeCCEEE
Confidence 01 111 24799999998 333323322221 22 344441 222223566766676543
No 395
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.25 E-value=0.24 Score=51.75 Aligned_cols=39 Identities=15% Similarity=0.088 Sum_probs=34.5
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 52 EGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 52 ~~~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+..+.+.+|.|||.|+-||.+|..|++.|++|+.+|-++
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 344567899999999999999999999999999999764
No 396
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.23 E-value=0.21 Score=48.69 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++++|+|.|+|+-|-.++..|.+.|++|++++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 35789999999999999999999999999999875
No 397
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.06 E-value=0.19 Score=51.21 Aligned_cols=34 Identities=35% Similarity=0.425 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPR 89 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~ 89 (584)
...+|||+|+|-+|+.+|+.|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999998888 89999987
No 398
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.05 E-value=0.23 Score=49.61 Aligned_cols=32 Identities=31% Similarity=0.450 Sum_probs=30.3
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 68999999999999999999999999999986
No 399
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.93 E-value=0.24 Score=46.81 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=31.4
Q ss_pred CCCCCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 54 EFKKKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 54 ~~~~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
....++|+|.|| |.-|..++..|.+.|++|+++++++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 345679999998 9999999999999999999999863
No 400
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.89 E-value=0.24 Score=48.14 Aligned_cols=34 Identities=12% Similarity=0.306 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|+|.|+|+-|-.++..|.+.|++|+++++++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 5789999999999999999999999999998863
No 401
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.87 E-value=0.26 Score=48.97 Aligned_cols=37 Identities=27% Similarity=0.245 Sum_probs=33.3
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
...+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3456799999999999999999999999999999874
No 402
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=89.77 E-value=0.27 Score=49.42 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
+.+|+|||+|.-|.++|..|+..|+ +|+|+|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3589999999999999999998887 999999874
No 403
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=89.68 E-value=0.25 Score=51.17 Aligned_cols=34 Identities=35% Similarity=0.340 Sum_probs=30.7
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI 271 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 271 (584)
+|+|||||.+|+-+|..|++.+ .+|+|+++.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G--------------~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNG--------------HEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT--------------CEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCC
Confidence 7999999999999999999854 799999998765
No 404
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.54 E-value=0.31 Score=45.44 Aligned_cols=36 Identities=14% Similarity=0.272 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
.+++|.|||+|.-|.+.|..|.+.|++|+++|+++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999999999999998765
No 405
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.43 E-value=0.25 Score=49.44 Aligned_cols=35 Identities=20% Similarity=0.472 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999874
No 406
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.41 E-value=0.3 Score=48.88 Aligned_cols=36 Identities=17% Similarity=0.410 Sum_probs=31.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
+.+.+|.|||+|..|.++|..|...++ +|+|+|.++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 446799999999999999999998888 999999864
No 407
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=89.16 E-value=0.22 Score=51.93 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=29.9
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCc
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGD 269 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 269 (584)
.+|+|||||++|+-+|..|++.+ .+|+|+++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G--------------~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD--------------VDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT--------------CEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CeEEEEcCCC
Confidence 48999999999999999999865 8999999876
No 408
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.09 E-value=0.29 Score=50.68 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+|+|||+|.+|+.++..++..|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5789999999999999999999999999999864
No 409
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.08 E-value=0.27 Score=49.49 Aligned_cols=33 Identities=15% Similarity=0.237 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
+++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999974
No 410
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=89.06 E-value=0.39 Score=50.46 Aligned_cols=38 Identities=16% Similarity=0.268 Sum_probs=33.9
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
....++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 51 ~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 51 AYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 34567999999999999999999999999999998754
No 411
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.83 E-value=0.31 Score=49.22 Aligned_cols=33 Identities=27% Similarity=0.278 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
+++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999999999999976
No 412
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.75 E-value=0.29 Score=51.61 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
..++|+|||||-.|...+..|.+.|.+|+|++++
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3579999999999999999999999999999985
No 413
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.70 E-value=0.36 Score=47.07 Aligned_cols=32 Identities=34% Similarity=0.356 Sum_probs=30.3
Q ss_pred eEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 59 KVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 59 ~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 79999999999999999999999999999875
No 414
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=88.70 E-value=0.31 Score=50.45 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=33.0
Q ss_pred HHHHhCCcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccC
Q 045826 285 EKFKRDGIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTG 331 (584)
Q Consensus 285 ~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G 331 (584)
+.+++.|++|+++++|++|. +++++....+ |++ +.+|.||+|+|
T Consensus 204 ~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~--~~ad~VV~a~~ 249 (425)
T 3ka7_A 204 TVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRI--HDADLVISNLG 249 (425)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEE--EECSEEEECSC
T ss_pred HHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEE--EECCEEEECCC
Confidence 45567899999999999985 4555422222 664 99999999998
No 415
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.67 E-value=0.47 Score=50.04 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999999999999999874
No 416
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.64 E-value=0.35 Score=49.71 Aligned_cols=35 Identities=26% Similarity=0.288 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
...+|+|+|+|..|+.++..++..|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999999999999999999999999999874
No 417
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=88.54 E-value=0.3 Score=49.09 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=29.8
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH 270 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 270 (584)
.|+|||||.+|+-+|..|++.+ .+|+|+++.+.
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G--------------~~V~vlE~~~~ 38 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGG--------------HEVLVAEAAEG 38 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCC
Confidence 7999999999999999999854 79999999864
No 418
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.43 E-value=0.39 Score=43.83 Aligned_cols=33 Identities=30% Similarity=0.477 Sum_probs=30.7
Q ss_pred CeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 58 KKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++|+|+|| |+-|..++..|.+.|++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999998 9999999999999999999999875
No 419
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.39 E-value=0.26 Score=49.05 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=29.5
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
++|.|||+|.-|.+.|..|.+.|++|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 58999999999999999999999999999985
No 420
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.32 E-value=0.4 Score=48.14 Aligned_cols=34 Identities=24% Similarity=0.466 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
+++|.|||+|.-|..+|..|+..|+ +|+|+|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999998888 999999874
No 421
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.28 E-value=0.35 Score=50.84 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=31.0
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++|.|||.|.-|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999874
No 422
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.28 E-value=0.41 Score=47.86 Aligned_cols=34 Identities=21% Similarity=0.452 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
+++|+|||+|..|..+|..|+..|+ +|+|+|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999998887 999999764
No 423
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=88.26 E-value=0.32 Score=51.66 Aligned_cols=36 Identities=22% Similarity=0.481 Sum_probs=28.9
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI 271 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 271 (584)
-.|+|||||.+|+-+|..|++. .+.+|+|+++.+++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~-------------~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI-------------DGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-------------CCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh-------------CCCCEEEEECCCCC
Confidence 3799999999999999999875 13678887776654
No 424
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.26 E-value=0.42 Score=47.79 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=31.4
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
+.+.+|.|||+|..|.++|..|+..++ +|+|+|.++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 345799999999999999999987777 999999874
No 425
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.10 E-value=0.29 Score=46.36 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=29.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|+|+|+|..|...|..|...|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 35689999999999999999998899 99999864
No 426
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.09 E-value=0.36 Score=51.01 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccC-CC-eEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN-SF-EVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~-g~-~V~lid~~~~ 91 (584)
.++|.|||+|.-|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999998 99 9999998864
No 427
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=88.04 E-value=0.31 Score=50.52 Aligned_cols=34 Identities=35% Similarity=0.628 Sum_probs=30.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI 271 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 271 (584)
.|+|||||.+|+-+|..|++.+ .+|+|+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G--------------~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAG--------------KKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTT--------------CCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcC--------------CeEEEEecCCCc
Confidence 7999999999999999999865 799999987654
No 428
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.02 E-value=0.4 Score=44.72 Aligned_cols=34 Identities=32% Similarity=0.586 Sum_probs=31.3
Q ss_pred CCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|+|.|| |+-|-.++..|.+.|++|+++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 578999996 9999999999999999999999875
No 429
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.99 E-value=0.24 Score=46.55 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=31.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEE-EcCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQV-VSPRN 90 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~l-id~~~ 90 (584)
+.+++|.|||+|.-|.+.|..|.+.|++|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 3467999999999999999999999999998 77753
No 430
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.95 E-value=0.41 Score=48.67 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 431
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.87 E-value=0.4 Score=48.78 Aligned_cols=34 Identities=32% Similarity=0.352 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.++|+|+|+|.+|..++..|+..|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4799999999999999999999999999999863
No 432
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.86 E-value=0.44 Score=47.51 Aligned_cols=34 Identities=35% Similarity=0.572 Sum_probs=31.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPR 89 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~ 89 (584)
..++|.|||+|.-|.++|..|+..|+ +|+|+|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45799999999999999999998888 99999986
No 433
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=87.83 E-value=0.94 Score=38.94 Aligned_cols=73 Identities=14% Similarity=0.169 Sum_probs=47.8
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeE
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVK 302 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~ 302 (584)
.+|+|+|.|..|..+|..|.+.+ .+|+++++.+. . .+.+++.|+.++.+..-
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g--------------~~v~vid~~~~--------~----~~~~~~~g~~~i~gd~~-- 59 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD--------------IPLVVIETSRT--------R----VDELRERGVRAVLGNAA-- 59 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCHH--------H----HHHHHHTTCEEEESCTT--
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCHH--------H----HHHHHHcCCCEEECCCC--
Confidence 38999999999999999998754 78999988642 1 13455678876553210
Q ss_pred EcCCeEEEEeCCCCeEEEEecceEEEccC
Q 045826 303 LSDKEISTKDRATGQISSIPYGMVVWSTG 331 (584)
Q Consensus 303 v~~~~v~~~~~~~G~~~~i~~D~vI~a~G 331 (584)
... .+.. .|- -.+|.+|.+++
T Consensus 60 --~~~-~l~~--a~i---~~ad~vi~~~~ 80 (140)
T 3fwz_A 60 --NEE-IMQL--AHL---ECAKWLILTIP 80 (140)
T ss_dssp --SHH-HHHH--TTG---GGCSEEEECCS
T ss_pred --CHH-HHHh--cCc---ccCCEEEEECC
Confidence 000 0110 021 35899999987
No 434
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.80 E-value=0.4 Score=47.50 Aligned_cols=33 Identities=33% Similarity=0.374 Sum_probs=30.0
Q ss_pred CeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~ 90 (584)
++|+|||+|..|.+.|..|+..|+ +|+|+|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999998888 999999863
No 435
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.78 E-value=0.39 Score=50.91 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+|.|||.|+-|+..|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 436
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=87.77 E-value=0.29 Score=51.52 Aligned_cols=34 Identities=26% Similarity=0.520 Sum_probs=29.5
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCc--EEEEecCCccc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFT--RITLLEAGDHI 271 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~--~V~lv~~~~~i 271 (584)
+|+|||||.+|+-+|..|++.+ . +|+|+++.+++
T Consensus 4 dVvVIGaGiaGLsaA~~L~~~G--------------~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 4 TVVVLGGGISGLAASYHLSRAP--------------CPPKVVLVESSERL 39 (477)
T ss_dssp EEEEECCBHHHHHHHHHHHTSS--------------SCCEEEEECSSSSS
T ss_pred eEEEECCcHHHHHHHHHHHhCC--------------CCCcEEEEeCCCCC
Confidence 8999999999999999998754 5 89999887654
No 437
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.76 E-value=0.38 Score=44.97 Aligned_cols=35 Identities=29% Similarity=0.316 Sum_probs=30.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999998899999999763
No 438
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.64 E-value=0.34 Score=46.52 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
.++|+|||+|-.|..+|..|+..|. +|+|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 899999864
No 439
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=87.60 E-value=0.35 Score=49.22 Aligned_cols=33 Identities=33% Similarity=0.403 Sum_probs=30.4
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 389999999999999999999999999999863
No 440
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.52 E-value=0.41 Score=47.73 Aligned_cols=34 Identities=21% Similarity=0.467 Sum_probs=30.8
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
+++|.|||+|.-|...|..|+..|+ +|+|+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999998888 999999874
No 441
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.41 E-value=0.46 Score=49.44 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=30.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+++|.|||.|.-|+..|..|++ |++|+++|+++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345689999999999999999988 99999999874
No 442
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.32 E-value=0.44 Score=47.56 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=30.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~ 90 (584)
+.+|+|||+|..|.++|..|...+. +|+|+|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999997777 899999764
No 443
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.31 E-value=0.37 Score=47.75 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=29.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~~ 90 (584)
.+++|.|||+|..|..+|..|...++ +|+|+|.+.
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 35799999999999999999987787 999999865
No 444
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.24 E-value=1.8 Score=42.99 Aligned_cols=45 Identities=24% Similarity=0.456 Sum_probs=35.4
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEe
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKT 296 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~ 296 (584)
+|+|||+|..|.-+|..|.+.+ .+|+++.|.+. +.+++.|+.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g--------------~~V~~~~r~~~--------------~~i~~~Gl~~~~ 48 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTG--------------HCVSVVSRSDY--------------ETVKAKGIRIRS 48 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTT--------------CEEEEECSTTH--------------HHHHHHCEEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CeEEEEeCChH--------------HHHHhCCcEEee
Confidence 8999999999999999998754 79999987530 455666776653
No 445
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.13 E-value=0.43 Score=47.01 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 446
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.11 E-value=0.48 Score=46.83 Aligned_cols=35 Identities=11% Similarity=0.034 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999864
No 447
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.08 E-value=0.4 Score=49.76 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..+|+|+|.|.-|..+|..|...|++|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999874
No 448
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.99 E-value=0.53 Score=45.76 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
..++|+|+|+|-.|.++|..|.+.|.+|++++++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3578999999999999999999999999999976
No 449
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=86.97 E-value=0.44 Score=49.81 Aligned_cols=41 Identities=29% Similarity=0.428 Sum_probs=31.5
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI 271 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 271 (584)
.+|+|||||.+|+-+|..|++.+.+ ..++.+|+|+|+.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~--------~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKE--------KNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTT--------TTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccc--------cCCCCCEEEEECCCCC
Confidence 4899999999999999999987610 0023689999887644
No 450
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.96 E-value=0.42 Score=47.13 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5789999999999999999999999999999864
No 451
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.93 E-value=0.52 Score=46.83 Aligned_cols=33 Identities=21% Similarity=0.509 Sum_probs=29.8
Q ss_pred CeEEEECCcHHHHHHHHhcccCCC-eEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~~ 90 (584)
++|+|||+|..|..+|..|+..|+ +|+|+|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999998886 999999764
No 452
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.89 E-value=0.67 Score=46.15 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=32.8
Q ss_pred CCCCCCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 53 GEFKKKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 53 ~~~~~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.....++|+|.|| |+-|..++..|.+.|++|++++++.
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3445578999998 9999999999999999999999864
No 453
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=86.82 E-value=0.43 Score=48.58 Aligned_cols=33 Identities=27% Similarity=0.363 Sum_probs=29.3
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH 270 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 270 (584)
.|+|||||.+|+-+|..|++.+ .+|+|+++.+.
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G--------------~~V~vie~~~~ 37 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQG--------------VKTLLVDAFDP 37 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCC
Confidence 7999999999999999999854 78999998753
No 454
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.80 E-value=0.57 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.++|+|||+|-+|-+++..|...|.+|+|++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6799999999999999999998899999999874
No 455
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=86.73 E-value=0.47 Score=48.55 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=31.9
Q ss_pred ccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCC-ccc
Q 045826 221 KILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAG-DHI 271 (584)
Q Consensus 221 ~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~-~~i 271 (584)
...+|+|||+|.+|+-+|..|.+.+ .+|+|+++. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G--------------~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAG--------------HDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTS--------------CEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--------------CcEEEEecccccc
Confidence 3469999999999999999998854 799999998 654
No 456
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.64 E-value=0.55 Score=43.40 Aligned_cols=32 Identities=28% Similarity=0.487 Sum_probs=29.5
Q ss_pred eEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 59 KVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 59 ~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+|+|.|| |+-|..++..|.+.|++|++++|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 7999996 9999999999999999999999863
No 457
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=86.62 E-value=0.54 Score=44.87 Aligned_cols=37 Identities=32% Similarity=0.401 Sum_probs=31.9
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 54 EFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 54 ~~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
....++|.|||+|.-|.+.|..|.+.|++|+++|+++
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3456899999999999999999999999999999874
No 458
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.54 E-value=0.53 Score=48.03 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|+|+|+|..|..+|..|+..|++|+++|+++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34799999999999999999999999999999763
No 459
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.42 E-value=0.53 Score=46.06 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=30.9
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999999874
No 460
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.40 E-value=0.58 Score=46.39 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=30.0
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|.|||+|.-|...|..|. .|.+|+++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999999863
No 461
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=86.35 E-value=0.57 Score=49.53 Aligned_cols=37 Identities=35% Similarity=0.419 Sum_probs=31.5
Q ss_pred cceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccc
Q 045826 222 ILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHIL 272 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il 272 (584)
..+|+|||+|.+|+-+|..|.+.+ .+|+|+++.+++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g--------------~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAG--------------YKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeccCCCC
Confidence 348999999999999999998754 7899999887653
No 462
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=86.34 E-value=0.74 Score=40.35 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=31.1
Q ss_pred hccceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcc
Q 045826 220 KKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDH 270 (584)
Q Consensus 220 ~~~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~ 270 (584)
....+|+|+|+|.+|..+|..|...+ .+|+++++.+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--------------~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--------------HSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCHH
Confidence 45569999999999999999998754 78999988654
No 463
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=86.25 E-value=0.46 Score=50.78 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=29.9
Q ss_pred CcEEEeCCceeEEc--CCeEEEEeCCCCeEEEEecceEEEccCC
Q 045826 291 GIDLKTGSMVVKLS--DKEISTKDRATGQISSIPYGMVVWSTGI 332 (584)
Q Consensus 291 GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 332 (584)
|++++++++|++|+ ++++.+.. .+|+. +.+|.||+|++.
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~VI~a~p~ 266 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVET-LNHEM--YEAKYVISAIPP 266 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEE-TTSCE--EEESEEEECSCG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEE-CCCeE--EEeCEEEECCCH
Confidence 67899999999995 34566554 44765 899999999984
No 464
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=86.25 E-value=0.47 Score=47.48 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=30.8
Q ss_pred CCCCCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 54 EFKKKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 54 ~~~~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
...+++|+|.|| |+-|-.++..|.+.|++|+++++.+.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 345678999998 99999999999999999999998753
No 465
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.20 E-value=0.66 Score=45.77 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCC-eEEEEcCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSF-EVQVVSPR 89 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~-~V~lid~~ 89 (584)
..++|+|||+|-+|..+|..|...|+ +|++++|+
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35789999999999999999999998 99999986
No 466
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.08 E-value=0.66 Score=42.93 Aligned_cols=32 Identities=34% Similarity=0.412 Sum_probs=29.5
Q ss_pred eEEEEC-CcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 59 KVVVLG-TGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 59 ~VVIVG-gG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+|.||| +|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 799999 99999999999999999999999863
No 467
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.08 E-value=0.34 Score=47.45 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=31.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 3589999999999999999999999999999874
No 468
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.07 E-value=0.52 Score=47.03 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 35699999999999999999999999999999864
No 469
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=85.95 E-value=1.4 Score=44.19 Aligned_cols=87 Identities=16% Similarity=0.220 Sum_probs=53.6
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeCCceeE
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVK 302 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~ 302 (584)
.+|.|||+|..|.-+|..|++.+ .+|+++.+.++ .+.+++.|+.+.... ...
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g--------------~~V~~~~r~~~-------------~~~~~~~g~~~~~~~-~~~ 55 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG--------------EAINVLARGAT-------------LQALQTAGLRLTEDG-ATH 55 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT--------------CCEEEECCHHH-------------HHHHHHTCEEEEETT-EEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC--------------CEEEEEEChHH-------------HHHHHHCCCEEecCC-CeE
Confidence 38999999999999999998754 68999976321 145667888775421 111
Q ss_pred EcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHh
Q 045826 303 LSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQI 345 (584)
Q Consensus 303 v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~ 345 (584)
.. .+...+ +-+. .-++|+||+|+. .+.+...++.+
T Consensus 56 ~~--~~~~~~--~~~~-~~~~D~Vilavk---~~~~~~~~~~l 90 (335)
T 3ghy_A 56 TL--PVRATH--DAAA-LGEQDVVIVAVK---APALESVAAGI 90 (335)
T ss_dssp EE--CCEEES--CHHH-HCCCSEEEECCC---HHHHHHHHGGG
T ss_pred EE--eeeEEC--CHHH-cCCCCEEEEeCC---chhHHHHHHHH
Confidence 00 122221 1111 135899999986 34444555554
No 470
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=85.88 E-value=0.78 Score=42.62 Aligned_cols=33 Identities=12% Similarity=0.204 Sum_probs=29.8
Q ss_pred CCeEEEECC-cHHHHHHHHhcc-cCCCeEEEEcCC
Q 045826 57 KKKVVVLGT-GWAGTTFLKILK-SNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGg-G~AGl~aA~~L~-~~g~~V~lid~~ 89 (584)
+++|+|.|| |.-|..++..|. +.|++|++++++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 456999995 999999999999 899999999986
No 471
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=85.81 E-value=0.42 Score=52.97 Aligned_cols=39 Identities=23% Similarity=0.494 Sum_probs=30.2
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccc
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHI 271 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~i 271 (584)
.|+|||||++|+-+|..|++.... ..+.+|+|+++.+..
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~---------~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQ---------KPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHH---------STTCCEEEECSSSSC
T ss_pred cEEEECcCHHHHHHHHHHhccccc---------cCCCCEEEEeCCCCC
Confidence 799999999999999999982100 013899999987654
No 472
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=85.78 E-value=0.64 Score=45.76 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=30.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
...++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 34679999999999999999999 999999999864
No 473
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.74 E-value=0.76 Score=45.47 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999864
No 474
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=85.73 E-value=0.35 Score=47.60 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=30.5
Q ss_pred CeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
++|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999998899999999874
No 475
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=85.73 E-value=0.59 Score=48.97 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
..++.|||.|+-|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998864
No 476
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=85.67 E-value=0.54 Score=44.35 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=31.5
Q ss_pred CCCCCeEEEEC-CcHHHHHHHHhcccCC-CeEEEEcCCC
Q 045826 54 EFKKKKVVVLG-TGWAGTTFLKILKSNS-FEVQVVSPRN 90 (584)
Q Consensus 54 ~~~~~~VVIVG-gG~AGl~aA~~L~~~g-~~V~lid~~~ 90 (584)
.+.+++|+|.| +|.-|..++..|.+.| ++|+++++++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 34577899999 4999999999999999 8999999875
No 477
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=85.63 E-value=0.73 Score=47.58 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=30.8
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCC-cEEEEecCCcccc
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEF-TRITLLEAGDHIL 272 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~-~~V~lv~~~~~il 272 (584)
.+|+|||||.+|+-+|..|++. + .+|+++++.+++.
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~--------------g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA--------------GFHDYTILERTDHVG 43 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCcEEEEECCCCCC
Confidence 4899999999999999999874 3 6899999887763
No 478
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.58 E-value=0.67 Score=45.99 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+++|.|||+|.-|...|..|.+.|++|+++|+++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999998999999999764
No 479
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=85.57 E-value=0.59 Score=47.16 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=28.0
Q ss_pred eEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCC
Q 045826 224 HFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAG 268 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~ 268 (584)
.|+|||||.+|+-+|..|++.+ .+|+|+++.
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~G--------------~~V~vle~~ 38 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARKG--------------YSVHILARD 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CEEEEEecc
Confidence 8999999999999999998754 799999975
No 480
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.54 E-value=0.8 Score=46.92 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=34.2
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCCCCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAF 94 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~~~~~ 94 (584)
+++++|+|+|.-+.++|..+...|++|+++|.++.+.-
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~ 241 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT 241 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc
Confidence 57999999999999999999999999999999886543
No 481
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.50 E-value=0.65 Score=46.13 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=28.8
Q ss_pred eEEEECCcHHHHHHHHhccc--CCCeEEEEcCCC
Q 045826 59 KVVVLGTGWAGTTFLKILKS--NSFEVQVVSPRN 90 (584)
Q Consensus 59 ~VVIVGgG~AGl~aA~~L~~--~g~~V~lid~~~ 90 (584)
+|+|||+|..|.+.|..|+. .+.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 79999999999999999986 478999999874
No 482
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.49 E-value=0.61 Score=45.89 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=32.2
Q ss_pred CCCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCCC
Q 045826 56 KKKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRNY 91 (584)
Q Consensus 56 ~~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~~ 91 (584)
.+++|+|.|| |+-|-.++..|.+.|++|+++++.+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3679999999 99999999999999999999998754
No 483
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.40 E-value=1.5 Score=37.38 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=29.0
Q ss_pred cceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCc
Q 045826 222 ILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGD 269 (584)
Q Consensus 222 ~~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~ 269 (584)
.++++|+|+|..|..+|..|.+.+ .+|+++++.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--------------~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--------------KKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEECCH
Confidence 358999999999999999998754 7899998754
No 484
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.36 E-value=0.67 Score=45.34 Aligned_cols=33 Identities=33% Similarity=0.575 Sum_probs=30.4
Q ss_pred CeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 58 KKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+||+|.|| |+-|-.++..|.+.|++|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 47999998 9999999999999999999998864
No 485
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.36 E-value=0.67 Score=47.87 Aligned_cols=31 Identities=29% Similarity=0.435 Sum_probs=29.0
Q ss_pred eEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 59 KVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 59 ~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+|.|||.|.-|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999998 99999999864
No 486
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.35 E-value=0.66 Score=47.48 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
..++|+|||+|..|..+|..++..|++|+++|+++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45799999999999999999999999999999763
No 487
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=85.29 E-value=0.35 Score=53.29 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=30.5
Q ss_pred eEEEECCChhHHHHHHHHHH-HHHHhHhhhCcCCCCCcEEEEecCCccc
Q 045826 224 HFVVVGGGPTGVEFAAALHD-FVIDDLSKLYPSLKEFTRITLLEAGDHI 271 (584)
Q Consensus 224 ~vvVVGgG~~gvE~A~~l~~-~~~~~~~~~~~~~~~~~~V~lv~~~~~i 271 (584)
.|+|||||++|+-+|..|++ .+ .+|+|+++.+..
T Consensus 34 dVlIVGaGpaGL~~A~~La~~~G--------------~~V~viEr~~~~ 68 (639)
T 2dkh_A 34 DVLIVGCGPAGLTLAAQLAAFPD--------------IRTCIVEQKEGP 68 (639)
T ss_dssp EEEEECCSHHHHHHHHHHTTCTT--------------SCEEEECSSSSC
T ss_pred cEEEECcCHHHHHHHHHHHHhCC--------------CCEEEEeCCCCC
Confidence 79999999999999999987 55 799999988764
No 488
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=85.27 E-value=0.52 Score=49.26 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=30.1
Q ss_pred eEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 59 KVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 59 ~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+|.|||+|.-|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 489
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=85.24 E-value=0.58 Score=46.94 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=30.9
Q ss_pred CCCCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 55 FKKKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 55 ~~~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+.+++|+|+|| |+-|-.++..|.+.|++|+++.+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44578999999 9999999999998899999999875
No 490
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=85.21 E-value=0.61 Score=48.68 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=42.6
Q ss_pred ceEEEECCChhHHHHHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCcccccc-----------------ccHHHHHHHHH
Q 045826 223 LHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNM-----------------FDKRITASAEE 285 (584)
Q Consensus 223 ~~vvVVGgG~~gvE~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~-----------------~~~~~~~~~~~ 285 (584)
.+|+|||+|.+|+-+|..|++.+ .+|+|+++.+++... +... ...+.+
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g--------------~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~ 70 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAG--------------LSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD-QTALIS 70 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT-CHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CcEEEEECCCCCCCceeccccCCceeccCCeEecCc-cHHHHH
Confidence 38999999999999999998854 789999987765321 1111 244567
Q ss_pred HHHhCCcEEEe
Q 045826 286 KFKRDGIDLKT 296 (584)
Q Consensus 286 ~L~~~GV~v~~ 296 (584)
.+++.|++...
T Consensus 71 ~~~~~g~~~~~ 81 (453)
T 2yg5_A 71 LLDELGLKTFE 81 (453)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCcccc
Confidence 77888887644
No 491
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=85.10 E-value=0.71 Score=43.71 Aligned_cols=34 Identities=12% Similarity=0.211 Sum_probs=30.3
Q ss_pred CCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 57 KKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
|++|+|.|| |.-|.+++..|.+.|++|+++++++
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 367999998 8999999999999999999999875
No 492
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=85.09 E-value=0.69 Score=46.36 Aligned_cols=35 Identities=34% Similarity=0.473 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 56 KKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 56 ~~~~VVIVGgG~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
.+++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45799999999999999999999999999999863
No 493
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.02 E-value=0.56 Score=49.75 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccC--CCeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSN--SFEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~--g~~V~lid~~~ 90 (584)
+++|.|||.|.-|+..|..|++. |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999976 79999999864
No 494
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.96 E-value=0.71 Score=46.00 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCC-CeEEEEcCCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNS-FEVQVVSPRN 90 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g-~~V~lid~~~ 90 (584)
+++|.|||.|.-|...|..|.+.| ++|+++|+++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999874
No 495
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.94 E-value=0.72 Score=42.77 Aligned_cols=32 Identities=31% Similarity=0.465 Sum_probs=29.6
Q ss_pred eEEEECC-cHHHHHHHHhcccCCCeEEEEcCCC
Q 045826 59 KVVVLGT-GWAGTTFLKILKSNSFEVQVVSPRN 90 (584)
Q Consensus 59 ~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~~ 90 (584)
+|+|.|| |+-|..++..|.+.|++|+++++++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6999998 9999999999999999999999863
No 496
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.88 E-value=0.86 Score=44.47 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=30.6
Q ss_pred CCeEEEECC-cHHHHHHHHhcccCCCeEEEEcCC
Q 045826 57 KKKVVVLGT-GWAGTTFLKILKSNSFEVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGg-G~AGl~aA~~L~~~g~~V~lid~~ 89 (584)
+++|.|||+ |.-|...|..|.+.|++|+++|++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999 999999999999999999999976
No 497
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.86 E-value=0.86 Score=45.67 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=30.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCC
Q 045826 55 FKKKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPR 89 (584)
Q Consensus 55 ~~~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~ 89 (584)
....+|.|||+|..|.++|..|...++ +++|+|.+
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 346799999999999999999987776 89999975
No 498
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.85 E-value=0.67 Score=46.39 Aligned_cols=33 Identities=24% Similarity=0.522 Sum_probs=29.6
Q ss_pred CCeEEEECCcHHHHHHHHhcccCCC--eEEEEcCC
Q 045826 57 KKKVVVLGTGWAGTTFLKILKSNSF--EVQVVSPR 89 (584)
Q Consensus 57 ~~~VVIVGgG~AGl~aA~~L~~~g~--~V~lid~~ 89 (584)
..+|.|||+|..|.++|..|+..++ +++|+|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 5689999999999999999987776 89999975
No 499
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=84.85 E-value=1.7 Score=46.24 Aligned_cols=87 Identities=17% Similarity=0.162 Sum_probs=0.0
Q ss_pred HhccceEEEECCChhHHH-HHHHHHHHHHHhHhhhCcCCCCCcEEEEecCCccccccccHHHHHHHHHHHHhCCcEEEeC
Q 045826 219 RKKILHFVVVGGGPTGVE-FAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTG 297 (584)
Q Consensus 219 ~~~~~~vvVVGgG~~gvE-~A~~l~~~~~~~~~~~~~~~~~~~~V~lv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~ 297 (584)
....++|.|||-|-+|+- +|..|.+.+ .+|+..+..+. ...+.|++.||+++.+
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G--------------~~V~~~D~~~~-----------~~~~~l~~~gi~~~~g 73 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEG--------------YQISGSDLAPN-----------SVTQHLTALGAQIYFH 73 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTT--------------CEEEEECSSCC-----------HHHHHHHHTTCEEESS
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCC--------------CeEEEEECCCC-----------HHHHHHHHCCCEEECC
Q ss_pred CceeEEcCCeEEEEeCCCCeEEEEecceEEEccCCCCCchHHHHHHHhCC
Q 045826 298 SMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQ 347 (584)
Q Consensus 298 ~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~l 347 (584)
.....+ -.+|+||.++|+.+....-....+.++
T Consensus 74 ~~~~~~-----------------~~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 74 HRPENV-----------------LDASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CCGGGG-----------------TTCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CCHHHc-----------------CCCCEEEECCCCCCCCHHHHHHHHCCC
No 500
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.84 E-value=0.58 Score=46.42 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=29.7
Q ss_pred CeEEEECCcHHHHHHHHhcccCC--CeEEEEcCCC
Q 045826 58 KKVVVLGTGWAGTTFLKILKSNS--FEVQVVSPRN 90 (584)
Q Consensus 58 ~~VVIVGgG~AGl~aA~~L~~~g--~~V~lid~~~ 90 (584)
++|.|||+|.-|.++|..|...| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 58999999999999999999778 7999999863
Done!