Citrus Sinensis ID: 045826

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580----
MRGYTFYEGAIRAFQDRSLLSKILVIGTVSGGSAVAFSDSRPFQRIYGDSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVLLKNAEEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLELPFDWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI
cccHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEccccccccccccccccccccccEEEEEcccHHHHHHHHHcccccccEEEEcccccccccccccHHcccccccccccHHHHHHHHHccccEEEEEEEEEEEEccccEEEEEEccccccccccEEEEcccEEEEEccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHcccccccHHHHHccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEccccEEEECcccEEEcccccccEEEEccccEEEcccccccHHHHHHHHHHcccccEEEEccccccccccccEEEEcccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccHHcHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEcccccEEEcccccEEEEccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccc
***YTFYEGAIRAFQDRSLLSKILVIGTVSGGSAVAFSDSRP************FKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVLLKNAEEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCE*****PL**RGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLELPFDWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI
xxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MRGYTFYEGAIRAFQDRSLLSKILVIGTVSGGSAVAFSDSRPFQRIYGDSGEGEFKKKKVVVLGTGWAGTTFLKILKSNSFEVQVVSPRNYFAFTPLLPSVTNGTVEARSIVEPIRNIVRKKGMDIQFKEAECYKIDAEKKQIYCRTTEDRTCGGKEEFALDYDILVIAMGAQANTFNTPGVVEHAHFLKEVEHAQRIRRSVIDCFERASLPNLSDEERKKILHFVVVGGGPTGVEFAAALHDFVIDDLSKLYPSLKEFTRITLLEAGDHILNMFDKRITASAEEKFKRDGIDLKTGSMVVKLSDKEISTKDRATGQISSIPYGMVVWSTGIGTRPVIMDFMKQIGQANRRVLATDEWLRVEGCESVYALGDCATINQRKVMEDISAIFSKADKNNTGKLNVKDLKEVVKDICERYPQVEIYLNKKQLKNINVLLKNAEEDPKKASMEFDIEKFKKALSEVDSQMKHLPATAQVAAQEGAYLANCFNRMEQCEKNPEGPLRFRGAGRHRFHPFRYKHFGQFAPLGGEEAAAQLELPFDWISVGRGSQWLWYSVYASKQISWRTRFLVISDWRRRFMFGRDSSRI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
NAD(P)H dehydrogenase B4, mitochondrial NAD(P)H dehydrogenase; more efficient on NADH.probableQ9SKT7
Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial Catalyzes the oxidation of NADH.probableO43090

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.6.-.-Acting on NADH or NADPH.probable
1.6.5.-With a quinone or similar compound as acceptor.probable
1.6.5.3NADH:ubiquinone reductase (H(+)-translocating).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SX6, chain A
Confidence level:very confident
Coverage over the Query: 57-149,160-207,222-380,398-399,463-492,508-561
View the alignment between query and template
View the model in PyMOL
Template: 4G6H, chain A
Confidence level:very confident
Coverage over the Query: 54-375,466-583
View the alignment between query and template
View the model in PyMOL
Template: 1O94, chain A
Confidence level:confident
Coverage over the Query: 16-148,159-197,208-245,260-375
View the alignment between query and template
View the model in PyMOL
Template: 1NHQ, chain A
Confidence level:probable
Coverage over the Query: 119-204,220-242,257-410
View the alignment between query and template
View the model in PyMOL