BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045835
(511 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/287 (45%), Positives = 182/287 (63%), Gaps = 1/287 (0%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-EFL 284
Q F+L++++ A++NF + +G GGFG VYKG+LADGT++AVK+L + QG +F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 285 NEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK 344
E+ MIS H NL+++ G C+ + LLVY YM N S+A L R + LDWP RQ+
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I LG ARGLA+LH+ KI+HRD+KA N+LLD + + DFGLAKL + H+ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHL 464
GTIG++APEY G + K DV+ +G++ LE+++G+ A D LLDW L
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 465 QQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++ KL LVD L YK EE E++I+V+LLCT +SP RP MSEV
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 180/287 (62%), Gaps = 1/287 (0%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-EFL 284
Q F+L++++ A++NF + +G GGFG VYKG+LADG ++AVK+L + QG +F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 285 NEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK 344
E+ MIS H NL+++ G C+ + LLVY YM N S+A L R + LDWP RQ+
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I LG ARGLA+LH+ KI+HRD+KA N+LLD + + DFGLAKL + H+ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHL 464
G IG++APEY G + K DV+ +G++ LE+++G+ A D LLDW L
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 465 QQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++ KL LVD L YK EE E++I+V+LLCT +SP RP MSEV
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 174/288 (60%), Gaps = 6/288 (2%)
Query: 225 LQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFL 284
++ L ++ ATNNFD IG G FG VYKG L DG +A+K+ + +S QG EF
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 285 NEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK 344
EI +S +HP+LV + G C E ++++L+Y+YMEN +L L+G + + + W R +
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTR 403
IC+G ARGL +LH + I+HRD+K+ N+LLD + PKI+DFG++K E D+TH+
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 404 IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
+ GT+GY+ PEY + G LT K+DVYSFG+V E++ ++ + +L + L +WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS--AIVQSLPREMVNLAEWAVE 258
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+G+L ++VD L K + E + ++ C S RP+M +V
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 173/288 (60%), Gaps = 6/288 (2%)
Query: 225 LQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFL 284
++ L ++ ATNNFD IG G FG VYKG L DG +A+K+ + +S QG EF
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 285 NEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK 344
EI +S +HP+LV + G C E ++++L+Y+YMEN +L L+G + + + W R +
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTR 403
IC+G ARGL +LH + I+HRD+K+ N+LLD + PKI+DFG++K E +TH+
Sbjct: 144 ICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 404 IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
+ GT+GY+ PEY + G LT K+DVYSFG+V E++ ++ + +L + L +WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS--AIVQSLPREMVNLAEWAVE 258
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+G+L ++VD L K + E + ++ C S RP+M +V
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 142/239 (59%), Gaps = 23/239 (9%)
Query: 216 ETAFMKESDLQTISFTLKQIKAATNNFDS------AKKIGEGGFGPVYKGQLADGTIIAV 269
E ++ SD + SF+ ++K TNNFD K+GEGGFG VYKG + + T +AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 270 KQLSS----KSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAC 325
K+L++ + + ++F EI +++ QH NLV++ G +GD L LVY YM N SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL-- 117
Query: 326 ALFGRENC---ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP 382
R +C L W R KI G A G+ FLHE +HRDIK+ N+LLD
Sbjct: 118 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 383 KISDFGLAKLDEG-DKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
KISDFGLA+ E +T + +RI GT YMAPE AL G +T K+D+YSFG+V LEI++G
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 141/239 (58%), Gaps = 23/239 (9%)
Query: 216 ETAFMKESDLQTISFTLKQIKAATNNFDS------AKKIGEGGFGPVYKGQLADGTIIAV 269
E ++ SD + SF+ ++K TNNFD K+GEGGFG VYKG + + T +AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59
Query: 270 KQLSS----KSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAC 325
K+L++ + + ++F EI +++ QH NLV++ G +GD L LVY YM N SL
Sbjct: 60 KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL-- 117
Query: 326 ALFGRENC---ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP 382
R +C L W R KI G A G+ FLHE +HRDIK+ N+LLD
Sbjct: 118 --LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 383 KISDFGLAKLDEG-DKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
KISDFGLA+ E +T + RI GT YMAPE AL G +T K+D+YSFG+V LEI++G
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 137/232 (59%), Gaps = 23/232 (9%)
Query: 223 SDLQTISFTLKQIKAATNNFDS------AKKIGEGGFGPVYKGQLADGTIIAVKQLSS-- 274
SD + SF+ ++K TNNFD K+GEGGFG VYKG + + T +AVK+L++
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMV 60
Query: 275 --KSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGREN 332
+ + ++F EI +++ QH NLV++ G +GD L LVY YM N SL R +
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LDRLS 116
Query: 333 C---ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 389
C L W R KI G A G+ FLHE +HRDIK+ N+LLD KISDFGL
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 173
Query: 390 AKLDEG-DKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
A+ E + + RI GT YMAPE AL G +T K+D+YSFG+V LEI++G
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 130/226 (57%), Gaps = 23/226 (10%)
Query: 229 SFTLKQIKAATNNFDS------AKKIGEGGFGPVYKGQLADGTIIAVKQLSS----KSRQ 278
SF+ ++K TNNFD K GEGGFG VYKG + + T +AVK+L++ + +
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 63
Query: 279 GNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC---EL 335
++F EI + + QH NLV++ G +GD L LVY Y N SL R +C
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----LDRLSCLDGTP 119
Query: 336 ELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEG 395
L W R KI G A G+ FLHE +HRDIK+ N+LLD KISDFGLA+ E
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 396 DKTHI-STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+ +RI GT Y APE AL G +T K+D+YSFG+V LEI++G
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 12/225 (5%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR--EFLNEIAMISCLQHPNL 298
+ + +KIG G FG V++ + G+ +AVK L + R EFL E+A++ L+HPN+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
V G + L +V EY+ SL L + +LD R + +A+G+ +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
+ IVHRD+K+ N+L+D+ K+ DFGL++L + S AGT +MAPE
Sbjct: 156 RNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 419 GYLTYKADVYSFGIVALEIVSGK------NNMSYAPALEFDCTCL 457
K+DVYSFG++ E+ + + N A+ F C L
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL 258
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 14/221 (6%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR--EFLNEIAMISCLQHPNLVKIHG 303
+KIG G FG V++ + G+ +AVK L + R EFL E+A++ L+HPN+V G
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFK 363
+ L +V EY+ SL L + +LD R + +A+G+ +LH +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-P 159
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR-IAGTIGYMAPEYALWGYLT 422
IVHR++K+ N+L+D+ K+ DFGL++L T +S++ AGT +MAPE
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 423 YKADVYSFGIVALEIVSGK------NNMSYAPALEFDCTCL 457
K+DVYSFG++ E+ + + N A+ F C L
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL 258
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 8/276 (2%)
Query: 214 HKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS 273
H+ T S QT + + K+G+G FG V+ G T +A+K L
Sbjct: 241 HRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 300
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC 333
+ FL E ++ L+H LV+++ E + + +V EYM SL L G
Sbjct: 301 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGK 358
Query: 334 ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 393
L L P + IA G+A++ R VHRD++A N+L+ +L K++DFGLA+L
Sbjct: 359 YLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 413
Query: 394 EGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFD 453
E ++ I + APE AL+G T K+DV+SFGI+ E+ + K + Y + +
Sbjct: 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-KGRVPYPGMVNRE 472
Query: 454 CTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAER 489
++ + + E + + + ++KE ER
Sbjct: 473 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 508
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 214 HKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS 273
H+ T S QT + + K+G+G FG V+ G T +A+K L
Sbjct: 158 HRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC 333
+ FL E ++ L+H LV+++ E + + +V EYM SL L G
Sbjct: 218 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGK 275
Query: 334 ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 393
L L P + IA G+A++ R VHRD++A N+L+ +L K++DFGLA+L
Sbjct: 276 YLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 394 EGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
E ++ I + APE AL+G T K+DV+SFGI+ E+ +
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 8/276 (2%)
Query: 214 HKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS 273
H+ T S QT + + K+G+G FG V+ G T +A+K L
Sbjct: 158 HRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC 333
+ FL E ++ L+H LV+++ E + + +V EYM SL L G
Sbjct: 218 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGK 275
Query: 334 ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 393
L L P + IA G+A++ R VHRD++A N+L+ +L K++DFGLA+L
Sbjct: 276 YLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 394 EGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFD 453
E ++ I + APE AL+G T K+DV+SFGI+ E+ + K + Y + +
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-KGRVPYPGMVNRE 389
Query: 454 CTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAER 489
++ + + E + + + ++KE ER
Sbjct: 390 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 77
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 78 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 131
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 192 SDVWSFGILLTEIVT 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 136
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 78
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 79 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 132
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 193 SDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 84
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 138
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 199 SDVWSFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 8/276 (2%)
Query: 214 HKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS 273
H+ T S QT + + K+G+G FG V+ G T +A+K L
Sbjct: 158 HRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 217
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC 333
+ FL E ++ L+H LV+++ E + + +V EYM SL L G
Sbjct: 218 PGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGK 275
Query: 334 ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 393
L L P + IA G+A++ R VHRD++A N+L+ +L K++DFGLA+L
Sbjct: 276 YLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 394 EGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFD 453
E ++ I + APE AL+G T K+DV+SFGI+ E+ + K + Y + +
Sbjct: 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-KGRVPYPGMVNRE 389
Query: 454 CTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAER 489
++ + + E + + + ++KE ER
Sbjct: 390 VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 85
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 86 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 139
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 200 SDVWSFGILLTEIVT 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 19/216 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGNREFLNEIAMISCL 293
+N +++GEG FG V+ + D ++AVK L S ++F E +++ L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLA---------CALFGRENCELELDWPTRQK 344
QH ++VK +G CVEGD L++V+EYM++ L L N EL
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTR 403
I IA G+ +L + VHRD+ N L+ +L KI DFG+++ + D +
Sbjct: 133 IAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 404 IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
I +M PE ++ T ++DV+S G+V EI +
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 136
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 81
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 82 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 135
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 196 SDVWSFGILLTEIVT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 74 E-EPIXIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 188 VWSFGILLTELTT-KGRVPYP 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 86
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 140
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 201 SDVWSFGILLTEIVT 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 71
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 125
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 186 SDVWSFGILLTEIVT 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 77 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 191 VWSFGILLTELTT-KGRVPYP 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 195 VWSFGILLTELTT-KGRVPYP 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
K++G G FG V+ G + T +AVK L + + FL E ++ LQH LV+++
Sbjct: 18 VKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + ++ EYM SL L E ++ L P IA G+A++ R
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNY 131
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A NVL+ L KI+DFGLA++ E ++ I + APE +G T K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 73 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 126
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 187 VWSFGILLTELTT-KGRVPYP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 75 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 128
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 189 VWSFGILLTELTT-KGRVPYP 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 195 VWSFGILLTELTT-KGRVPYP 214
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
E + + +V EYM SL L E L+L P + +A G+A++ R +
Sbjct: 74 SE-EPIYIVTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+++ N+L+ L KI+DFGLA+L E ++ I + APE AL+G T K+
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 426 DVYSFGIVALEIVS 439
DV+SFGI+ E+V+
Sbjct: 188 DVWSFGILLTELVT 201
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 7/226 (3%)
Query: 214 HKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS 273
H+ T S QT + + K+G+G FG V+ G T +A+K L
Sbjct: 159 HRLTNVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 218
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC 333
FL E ++ L+H LV+++ E + + +V EYM SL L G
Sbjct: 219 P-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGK 276
Query: 334 ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 393
L L P + IA G+A++ R VHRD++A N+L+ +L K++DFGL +L
Sbjct: 277 YLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLI 331
Query: 394 EGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
E ++ I + APE AL+G T K+DV+SFGI+ E+ +
Sbjct: 332 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVCEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G FG V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 72
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 126
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HR+++A N+L+ L+ KI+DFGLA+L E ++ I + APE +G T K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 187 SDVWSFGILLTEIVT 201
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ ++H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM SL L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD+ A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM L L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVMEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
KK+G G FG V+ T +AVK + S FL E ++ LQH LVK+H
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLH-AV 251
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
V + + ++ E+M SL L E + L P IA G+AF+ + + +
Sbjct: 252 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YI 306
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD++A N+L+ L KI+DFGLA++ E ++ I + APE +G T K+
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 426 DVYSFGIVALEIVS 439
DV+SFGI+ +EIV+
Sbjct: 367 DVWSFGILLMEIVT 380
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 6/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
KK+G G FG V+ G + T +AVK L + + FL E ++ LQH LV+++
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ E+M SL L E ++ L P IA G+A++ R
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNY 130
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A NVL+ L KI+DFGLA++ E ++ I + APE +G T K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 425 ADVYSFGIVALEIVS 439
++V+SFGI+ EIV+
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGLA++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 8/201 (3%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
K+G+G FG V+ G T +A+K L + FL E ++ L+H LV+++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
E + + +V EYM L L G L L P + IA G+A++ R VH
Sbjct: 84 E-EPIYIVTEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVH 137
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKAD 426
RD++A N+L+ +L K++DFGLA+L E ++ I + APE AL+G T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 427 VYSFGIVALEIVSGKNNMSYA 447
V+SFGI+ E+ + K + Y
Sbjct: 198 VWSFGILLTELTT-KGRVPYP 217
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
KK+G G FG V+ T +AVK + S FL E ++ LQH LVK+H
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV- 78
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
V + + ++ E+M SL L E + L P IA G+AF+ + + +
Sbjct: 79 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YI 133
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD++A N+L+ L KI+DFGLA++ E ++ I + APE +G T K+
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 426 DVYSFGIVALEIVS 439
DV+SFGI+ +EIV+
Sbjct: 194 DVWSFGILLMEIVT 207
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 7/195 (3%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+++G G G V+ G T +AVK L S + FL E ++ LQH LV+++
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ + + ++ EYMEN SL L +L ++ + IA G+AF+ E +
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRD++A N+L+ L+ KI+DFGLA+L E + I + APE +G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EIV+
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 27 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 139
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 140 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 196
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 197 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL ++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG V+ G + +A+K + + +F+ E ++ L HP LV+++G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 305 CVEGDQLLLVYEYMENNSLA------CALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
C+E + LV+E+ME+ L+ LF E T +CL + G+A+L E
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE---------TLLGMCLDVCEGMAYLEE 121
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
S ++HRD+ A N L+ + K+SDFG+ + D+ ST + + +PE +
Sbjct: 122 AS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 419 GYLTYKADVYSFGIVALEIVS 439
+ K+DV+SFG++ E+ S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKSRQGN 280
QT+ K++ A + D K +G G FG V G+L +A+K L + +
Sbjct: 4 QTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 281 REFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWP 340
R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ + +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---DAQFT 116
Query: 341 TRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E D
Sbjct: 117 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 399 HISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T G I + +PE + T +DV+S+GIV E++S
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKSRQGN 280
QT+ K++ A + D K +G G FG V G+L +A+K L + +
Sbjct: 21 QTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 281 REFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWP 340
R+FL E +++ HPN++++ G + +++V EYMEN SL F R++ + +
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKH---DAQFT 133
Query: 341 TRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E D
Sbjct: 134 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 399 HISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T G I + +PE + T +DV+S+GIV E++S
Sbjct: 191 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 37/270 (13%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVE 307
+G G FG V K + +A+KQ+ S+S + + F+ E+ +S + HPN+VK++G C+
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 308 GDQLLLVYEYMENNSLACALFGRENCEL-----ELDWPTRQKICLGIARGLAFLHEESRF 362
+ + LV EY E SL L G E + W CL ++G+A+LH
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 125
Query: 363 KIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
++HRD+K N+LL KI DFG A +TH+ T G+ +MAPE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNY 181
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+ K DV+S+GI+ E+++ + F + WA H L++ + + + S
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IMWAVHNGTRPPLIKNLPKPIESL 237
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ C + PS RP+M E+
Sbjct: 238 MTR------------CWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 128/270 (47%), Gaps = 37/270 (13%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVE 307
+G G FG V K + +A+KQ+ S+S + + F+ E+ +S + HPN+VK++G C+
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 308 GDQLLLVYEYMENNSLACALFGRENCEL-----ELDWPTRQKICLGIARGLAFLHEESRF 362
+ + LV EY E SL L G E + W CL ++G+A+LH
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 124
Query: 363 KIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
++HRD+K N+LL KI DFG A +TH++ G+ +MAPE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNY 180
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+ K DV+S+GI+ E+++ + F + WA H L++ + + + S
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IMWAVHNGTRPPLIKNLPKPIESL 236
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ C + PS RP+M E+
Sbjct: 237 MTR------------CWSKDPSQRPSMEEI 254
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 42/290 (14%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGN-------REFLNEIAM 289
A N + K+IG+GGFG V+KG+L D +++A+K L +G +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGI 349
+S L HPN+VK++G + +V E++ L L + + + W + ++ L I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLL-----DRDLNPKISDFGLAKLDEGDKTHISTRI 404
A G+ ++ ++ IVHRD+++ N+ L + + K++DFGL++ H + +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGL 186
Query: 405 AGTIGYMAPEY--ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWAC 462
G +MAPE A T KAD YSF ++ I++G+ P E+ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE-----GPFDEYSYGKI----- 236
Query: 463 HLQQDGKLVELV-DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
K + ++ +E L ++ R+ V LC + P RP S +
Sbjct: 237 ------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG V+ G + +A+K + S + +F+ E ++ L HP LV+++G
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGV 90
Query: 305 CVEGDQLLLVYEYMENNSLA------CALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
C+E + LV+E+ME+ L+ LF E T +CL + G+A+L E
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE---------TLLGMCLDVCEGMAYLEE 141
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
++HRD+ A N L+ + K+SDFG+ + D+ ST + + +PE +
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 198
Query: 419 GYLTYKADVYSFGIVALEIVS 439
+ K+DV+SFG++ E+ S
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFS 219
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG V+ G + +A+K + + +F+ E ++ L HP LV+++G
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 305 CVEGDQLLLVYEYMENNSLA------CALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
C+E + LV+E+ME+ L+ LF E T +CL + G+A+L E
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE---------TLLGMCLDVCEGMAYLEE 124
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
++HRD+ A N L+ + K+SDFG+ + D+ ST + + +PE +
Sbjct: 125 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 181
Query: 419 GYLTYKADVYSFGIVALEIVS 439
+ K+DV+SFG++ E+ S
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFS 202
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I ARG+ +LH +S I
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L D KI DFGLA + +H +++G+I +MAPE
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG V+ G + +A+K + + +F+ E ++ L HP LV+++G
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 305 CVEGDQLLLVYEYMENNSLA------CALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
C+E + LV+E+ME+ L+ LF E T +CL + G+A+L E
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE---------TLLGMCLDVCEGMAYLEE 119
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
++HRD+ A N L+ + K+SDFG+ + D+ ST + + +PE +
Sbjct: 120 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 176
Query: 419 GYLTYKADVYSFGIVALEIVS 439
+ K+DV+SFG++ E+ S
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG V+ G + +A+K + + +F+ E ++ L HP LV+++G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 305 CVEGDQLLLVYEYMENNSLA------CALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
C+E + LV+E+ME+ L+ LF E T +CL + G+A+L E
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE---------TLLGMCLDVCEGMAYLEE 121
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
++HRD+ A N L+ + K+SDFG+ + D+ ST + + +PE +
Sbjct: 122 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 419 GYLTYKADVYSFGIVALEIVS 439
+ K+DV+SFG++ E+ S
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFS 199
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 246 KKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+KIG+G G VY +A G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ GD+L +V EY+ SL + E C +D +C + L FLH ++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETC---MDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRDIK+ N+LL D + K++DFG +++ ST + GT +MAPE K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPK 196
Query: 425 ADVYSFGIVALEIVSGK 441
D++S GI+A+E++ G+
Sbjct: 197 VDIWSLGIMAIEMIEGE 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V E MEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E QT+ K++ A + D K +G G FG V G+L +A+K L +
Sbjct: 29 EDPTQTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++++ G + +++V E MEN SL F R++ +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKH---D 141
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + +PE + T +DV+S+GIV E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 14/202 (6%)
Query: 246 KKIGEGGFGPVYKGQLADGT-----IIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNLV 299
K IG G FG VYKG L + +A+K L + + R +FL E ++ H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
++ G + ++++ EYMEN +L F RE + E + GIA G+ +L
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDK--FLREK-DGEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIG--YMAPEYAL 417
+ VHRD+ A N+L++ +L K+SDFGL+++ E D T G I + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 418 WGYLTYKADVYSFGIVALEIVS 439
+ T +DV+SFGIV E+++
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 20/220 (9%)
Query: 229 SFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQL----ADGTIIAVKQLSSK-SRQGNREF 283
SFT ++I+A+ + + K IG G G V G+L +A+K L + + + R+F
Sbjct: 41 SFT-REIEASRIHIE--KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF 97
Query: 284 LNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
L+E +++ HPN++++ G G ++V EYMEN SL L + + Q
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQ 152
Query: 344 KICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS 401
+ + G+ G+ +L S VHRD+ A NVL+D +L K+SDFGL+++ E D
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 402 TRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T G I + APE + + +DV+SFG+V E+++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I ARG+ +LH +S I
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L D KI DFGLA + +H +++G+I +MAPE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
QL +V ++ E +SL L E + + I ARG+ +LH +S I
Sbjct: 89 ST-APQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L D KI DFGLA + +H +++G+I +MAPE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 27/209 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS----RQGNREFLNEIAMISCLQHPNLVKIHG 303
IG GGFG VY+ G +AVK Q E + + L+HPN++ + G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 304 CCVEGDQLLLVYEYMENNSLACALFG-RENCELELDWPTRQKICLGIARGLAFLHEESRF 362
C++ L LV E+ L L G R ++ ++W + IARG+ +LH+E+
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIV 127
Query: 363 KIVHRDIKATNVLL-----DRDLNP---KISDFGLAKLDEGDKTHISTRI--AGTIGYMA 412
I+HRD+K++N+L+ + DL+ KI+DFGLA+ + H +T++ AG +MA
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMA 182
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE + +DV+S+G++ E+++G+
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
KK+G G FG V+ T +AVK + S FL E ++ LQH LVK+H
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV- 245
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
V + + ++ E+M SL L E + L P IA G+AF+ + + +
Sbjct: 246 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YI 300
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD++A N+L+ L KI+DFGLA++ G K I + APE +G T K+
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARV--GAKF--------PIKWTAPEAINFGSFTIKS 350
Query: 426 DVYSFGIVALEIVS 439
DV+SFGI+ +EIV+
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 108/201 (53%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 73 ST-APQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 247 KIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
++GEG FG V+ + D ++AVK L S ++F E +++ LQH ++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 301 IHGCCVEGDQLLLVYEYMENNSL----------ACALFGRENCEL-ELDWPTRQKICLGI 349
G C EG LL+V+EYM + L A L G E+ L + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTI 408
A G+ +L + VHRD+ N L+ + L KI DFG+++ + D + R I
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+M PE L+ T ++DV+SFG+V EI +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 247 KIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
++GEG FG V+ + D ++AVK L S ++F E +++ LQH ++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 301 IHGCCVEGDQLLLVYEYMENNSL----------ACALFGRENCEL-ELDWPTRQKICLGI 349
G C EG LL+V+EYM + L A L G E+ L + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTI 408
A G+ +L + VHRD+ N L+ + L KI DFG+++ + D + R I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+M PE L+ T ++DV+SFG+V EI +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 20/220 (9%)
Query: 229 SFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQL----ADGTIIAVKQLSSK-SRQGNREF 283
SFT ++I+A+ + + K IG G G V G+L +A+K L + + + R+F
Sbjct: 41 SFT-REIEASRIHIE--KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF 97
Query: 284 LNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
L+E +++ HPN++++ G G ++V EYMEN SL L + + Q
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQ 152
Query: 344 KICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS 401
+ + G+ G+ +L S VHRD+ A NVL+D +L K+SDFGL+++ E D
Sbjct: 153 LVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 402 TRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T G I + APE + + +DV+SFG+V E+++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 246 KKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKSRQGNREFLNEIAMISCLQHPNLVK 300
+ IG G FG V G+L +A+K L + + R+FL E +++ HPN+V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL--GIARGLAFLHE 358
+ G G +++V E+MEN +L L + + Q + + GIA G+ +L +
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDG-----QFTVIQLVGMLRGIAAGMRYLAD 163
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIG--YMAPEYA 416
VHRD+ A N+L++ +L K+SDFGL+++ E D + T G I + APE
Sbjct: 164 ---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 417 LWGYLTYKADVYSFGIVALEIVS 439
+ T +DV+S+GIV E++S
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMS 243
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 247 KIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
++GEG FG V+ + D ++AVK L S ++F E +++ LQH ++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 301 IHGCCVEGDQLLLVYEYMENNSL----------ACALFGRENCEL-ELDWPTRQKICLGI 349
G C EG LL+V+EYM + L A L G E+ L + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTI 408
A G+ +L + VHRD+ N L+ + L KI DFG+++ + D + R I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+M PE L+ T ++DV+SFG+V EI +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%), Gaps = 19/223 (8%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKSRQGN 280
QT+ K++ A + D K +G G FG V G+L +A+K L + +
Sbjct: 4 QTVHEFAKELDATNISID--KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 281 REFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWP 340
R+FL E +++ HPN++++ G + +++V E MEN SL F R++ + +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKH---DAQFT 116
Query: 341 TRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
Q + + GIA G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E D
Sbjct: 117 VIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 399 HISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T G I + +PE + T +DV+S+GIV E++S
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 248 IGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
+G+G FG K G ++ +K+L + R FL E+ ++ CL+HPN++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVH 366
+ +L + EY++ +L + ++ + + W R IA G+A+LH I+H
Sbjct: 78 KDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 367 RDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS-------------TRIAGTIGYMAP 413
RD+ + N L+ + N ++DFGLA+L +KT + G +MAP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKN-NMSYAP 448
E K DV+SFGIV EI+ N + Y P
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 120/231 (51%), Gaps = 19/231 (8%)
Query: 218 AFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS 273
F E Q + K+I A+ + K IG G FG V G+L +A+K L
Sbjct: 9 PFTFEDPNQAVREFAKEIDASCIKIE--KVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 274 SK-SRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGREN 332
+ + + R+FL+E +++ HPN++ + G + ++++ EYMEN SL F R+N
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA--FLRKN 124
Query: 333 CELELDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 390
+ + Q + + GI G+ +L + S VHRD+ A N+L++ +L K+SDFG++
Sbjct: 125 ---DGRFTVIQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 391 KLDEGDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
++ E D T G I + APE + T +DV+S+GIV E++S
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGN-------REFLNEIAM 289
A N + K+IG+GGFG V+KG+L D +++A+K L +G +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGI 349
+S L HPN+VK++G + +V E++ L L + + + W + ++ L I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLL-----DRDLNPKISDFGLAKLDEGDKTHISTRI 404
A G+ ++ ++ IVHRD+++ N+ L + + K++DFG ++ H + +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGL 186
Query: 405 AGTIGYMAPEY--ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWAC 462
G +MAPE A T KAD YSF ++ I++G+ P E+ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE-----GPFDEYSYGKI----- 236
Query: 463 HLQQDGKLVELV-DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
K + ++ +E L ++ R+ V LC + P RP S +
Sbjct: 237 ------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG VYKG+ + + +++ + Q + F NE+ ++ +H N++ G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ QL +V ++ E +SL L E + + I A+G+ +LH +S I
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L DL KI DFGLA + +H +++G+I +MAPE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVY+FGIV E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 19/201 (9%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
++IG G FG V+ G + +A+K + + +F+ E ++ L HP LV+++G
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 305 CVEGDQLLLVYEYMENNSLA------CALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
C+E + LV E+ME+ L+ LF E T +CL + G+A+L E
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE---------TLLGMCLDVCEGMAYLEE 122
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
++HRD+ A N L+ + K+SDFG+ + D+ ST + + +PE +
Sbjct: 123 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 179
Query: 419 GYLTYKADVYSFGIVALEIVS 439
+ K+DV+SFG++ E+ S
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFS 200
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 22/213 (10%)
Query: 246 KKIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
+++GEG FG V+ + D ++AVK L + ++F E +++ LQH ++V
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGR-ENCELELDWPTRQ-----------KICL 347
K +G C +GD L++V+EYM++ L L + + +D RQ I
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA G+ +L + VHRD+ N L+ +L KI DFG+++ + D +
Sbjct: 141 QIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
I +M PE ++ T ++DV+SFG++ EI +
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 116/205 (56%), Gaps = 20/205 (9%)
Query: 245 AKKIGEGGFGPVYKG-QLADGTII----AVKQLSSKS-RQGNREFLNEIAMISCLQHPNL 298
K +G G FG VYKG + +G + A+K L+ + + N EF++E +++ + HP+L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGREN---CELELDWPTRQKICLGIARGLAF 355
V++ G C+ + LV + M + L + ++ +L L+W C+ IA+G+ +
Sbjct: 80 VRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 132
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD-KTHISTRIAGTIGYMAPE 414
L E ++VHRD+ A NVL+ + KI+DFGLA+L EGD K + + I +MA E
Sbjct: 133 LEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ T+++DV+S+G+ E+++
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 42/290 (14%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGN-------REFLNEIAM 289
A N + K+IG+GGFG V+KG+L D +++A+K L +G +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGI 349
+S L HPN+VK++G + +V E++ L L + + + W + ++ L I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLL-----DRDLNPKISDFGLAKLDEGDKTHISTRI 404
A G+ ++ ++ IVHRD+++ N+ L + + K++DF L++ H + +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGL 186
Query: 405 AGTIGYMAPEY--ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWAC 462
G +MAPE A T KAD YSF ++ I++G+ P E+ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE-----GPFDEYSYGKI----- 236
Query: 463 HLQQDGKLVELV-DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
K + ++ +E L ++ R+ V LC + P RP S +
Sbjct: 237 ------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTII----AVKQLSSKS-RQGNREFLNEIAMISCL 293
K +G G FG VYKG + +G + A+K L+ + + N EF++E +++ +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGREN---CELELDWPTRQKICLGIA 350
HP+LV++ G C+ + LV + M + L + ++ +L L+W C+ IA
Sbjct: 98 DHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 150
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD-KTHISTRIAGTIG 409
+G+ +L E ++VHRD+ A NVL+ + KI+DFGLA+L EGD K + + I
Sbjct: 151 KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+MA E + T+++DV+S+G+ E+++
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +AVK + S + EF E + L HP LVK +G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 306 VEGDQLLLVYEYMENNSLACALF----GRENCELELDWPTRQKICLGIARGLAFLHEESR 361
+ + +V EY+ N L L G E +L ++C + G+AFL E +
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-------LEMCYDVCEGMAFL-ESHQ 124
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
F +HRD+ A N L+DRDL K+SDFG+ + D+ S + + APE +
Sbjct: 125 F--IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 422 TYKADVYSFGIVALEIVS 439
+ K+DV++FGI+ E+ S
Sbjct: 183 SSKSDVWAFGILMWEVFS 200
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 246 KKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+KIG+G G VY +A G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ GD+L +V EY+ SL + E C +D +C + L FLH ++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETC---MDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRDIK+ N+LL D + K++DFG +++ S + GT +MAPE K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-EMVGTPYWMAPEVVTRKAYGPK 196
Query: 425 ADVYSFGIVALEIVSGK 441
D++S GI+A+E++ G+
Sbjct: 197 VDIWSLGIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 246 KKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+KIG+G G VY +A G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ GD+L +V EY+ SL + E C +D +C + L FLH ++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETC---MDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRDIK+ N+LL D + K++DFG +++ S + GT +MAPE K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPK 196
Query: 425 ADVYSFGIVALEIVSGK 441
D++S GI+A+E++ G+
Sbjct: 197 VDIWSLGIMAIEMIEGE 213
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 19/227 (8%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLS-SKS 276
E Q + K+I+A+ + + IG G FG V G+L +A+K L +
Sbjct: 6 EDPNQAVHEFAKEIEASCITIE--RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 277 RQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE 336
+ R+FL E +++ HPN++ + G + +++V EYMEN SL F ++N +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT--FLKKN---D 118
Query: 337 LDWPTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 394
+ Q + + GI+ G+ +L S VHRD+ A N+L++ +L K+SDFGL+++ E
Sbjct: 119 GQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 175
Query: 395 GDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D T G I + APE + T +DV+S+GIV E+VS
Sbjct: 176 DDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 246 KKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+KIG+G G VY +A G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ GD+L +V EY+ SL + E C +D +C + L FLH ++
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--TETC---MDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HR+IK+ N+LL D + K++DFG +++ ST + GT +MAPE K
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPK 197
Query: 425 ADVYSFGIVALEIVSGK 441
D++S GI+A+E++ G+
Sbjct: 198 VDIWSLGIMAIEMIEGE 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 246 KKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+KIG+G G VY +A G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ GD+L +V EY+ SL + E C +D +C + L FLH ++
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--TETC---MDEGQIAAVCRECLQALEFLHSN---QV 138
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
+HRDIK+ N+LL D + K++DFG +++ S + GT +MAPE K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPK 197
Query: 425 ADVYSFGIVALEIVSGK 441
D++S GI+A+E++ G+
Sbjct: 198 VDIWSLGIMAIEMIEGE 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 28/240 (11%)
Query: 248 IGEGGFGPVYKGQLA----DGTIIAVKQLSSK-SRQGNREFLNEIAMISCLQHPNLVKIH 302
IG G FG V G L +A+K L S + + R+FL+E +++ HPN++ +
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL--GIARGLAFLHEES 360
G + ++++ E+MEN SL F R+N + + Q + + GIA G+ +L +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDS--FLRQN---DGQFTVIQLVGMLRGIAAGMKYLAD-- 153
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEGDKTHISTRIAGTIG--YMAPEY 415
VHRD+ A N+L++ +L K+SDFGL++ D D T+ S + G I + APE
Sbjct: 154 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA-LGGKIPIRWTAPEA 211
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
+ T +DV+S+GIV E+ MSY +D T D ++QD +L +D
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEV------MSYGERPYWDMTN-QDVINAIEQDYRLPPPMD 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 19/223 (8%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLSSK-SRQGN 280
Q + K+I A+ + K IG G FG V G+L +A+K L + + +
Sbjct: 2 QAVREFAKEIDASCIKIE--KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR 59
Query: 281 REFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWP 340
R+FL+E +++ HPN++ + G + ++++ EYMEN SL F R+N + +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA--FLRKN---DGRFT 114
Query: 341 TRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
Q + + GI G+ +L + S VHRD+ A N+L++ +L K+SDFG++++ E D
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 171
Query: 399 HISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T G I + APE + T +DV+S+GIV E++S
Sbjct: 172 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
D+ KIGEG G V + + G ++AVK++ + +Q NE+ ++ QH N+V+
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + GD+L +V E++E +L + E ++ +CL + + L+ LH +
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG 136
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
++HRDIK+ ++LL D K+SDFG + + GT +MAPE L
Sbjct: 137 ---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPE--LISR 190
Query: 421 LTY--KADVYSFGIVALEIVSGKNNMSYAPALE 451
L Y + D++S GI+ +E+V G+ P L+
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
D+ KIGEG G V + + G ++AVK++ + +Q NE+ ++ QH N+V+
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + GD+L +V E++E +L + E ++ +CL + + L+ LH +
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG 140
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
++HRDIK+ ++LL D K+SDFG + + GT +MAPE L
Sbjct: 141 ---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPE--LISR 194
Query: 421 LTY--KADVYSFGIVALEIVSGKNNMSYAPALE 451
L Y + D++S GI+ +E+V G+ P L+
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 227
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
D+ KIGEG G V + + G ++AVK++ + +Q NE+ ++ QH N+V+
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + GD+L +V E++E +L + E ++ +CL + + L+ LH +
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG 145
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
++HRDIK+ ++LL D K+SDFG + + GT +MAPE L
Sbjct: 146 ---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPE--LISR 199
Query: 421 LTY--KADVYSFGIVALEIVSGKNNMSYAPALE 451
L Y + D++S GI+ +E+V G+ P L+
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 232
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
D+ KIGEG G V + + G ++AVK++ + +Q NE+ ++ QH N+V+
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + GD+L +V E++E +L + E ++ +CL + + L+ LH +
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG 147
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
++HRDIK+ ++LL D K+SDFG + + GT +MAPE L
Sbjct: 148 ---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPE--LISR 201
Query: 421 LTY--KADVYSFGIVALEIVSGKNNMSYAPALE 451
L Y + D++S GI+ +E+V G+ P L+
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 234
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 116/216 (53%), Gaps = 19/216 (8%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLSSK-SRQGNREFLNEI 287
K+I A+ + K IG G FG V G+L +A+K L + + + R+FL+E
Sbjct: 3 KEIDASCIKIE--KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
+++ HPN++ + G + ++++ EYMEN SL F R+N + + Q + +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA--FLRKN---DGRFTVIQLVGM 115
Query: 348 --GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIA 405
GI G+ +L + S VHRD+ A N+L++ +L K+SDFG++++ E D T
Sbjct: 116 LRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 406 GTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G I + APE + T +DV+S+GIV E++S
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 115/204 (56%), Gaps = 21/204 (10%)
Query: 248 IGEGGFGPVYKGQL-ADG---TIIAVKQLSSK-SRQGNREFLNEIAMISCLQHPNLVKIH 302
IG G FG V +G+L A G + +A+K L + + REFL+E +++ +HPN++++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL--GIARGLAFLHEES 360
G ++++ E+MEN +L F R N + + Q + + GIA G+ +L E S
Sbjct: 82 GVVTNSMPVMILTEFMENGALDS--FLRLN---DGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE---GDKTHISTRIAGTIG--YMAPEY 415
VHRD+ A N+L++ +L K+SDFGL++ E D T+ S+ + G I + APE
Sbjct: 137 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS-LGGKIPIRWTAPEA 192
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
+ T +D +S+GIV E++S
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
D+ KIGEG G V + + G ++AVK++ + +Q NE+ ++ QH N+V+
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + GD+L +V E++E +L + E ++ +CL + + L+ LH +
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG 267
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
++HRDIK+ ++LL D K+SDFG + + GT +MAPE L
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPE--LISR 321
Query: 421 LTY--KADVYSFGIVALEIVSGKNNMSYAPALE 451
L Y + D++S GI+ +E+V G+ P L+
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 354
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
D+ KIGEG G V + + G ++AVK++ + +Q NE+ ++ QH N+V+
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + GD+L +V E++E +L + E ++ +CL + + L+ LH +
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG 190
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
++HRDIK+ ++LL D K+SDFG + + GT +MAPE L
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFCA-QVSKEVPRRKXLVGTPYWMAPE--LISR 244
Query: 421 LTY--KADVYSFGIVALEIVSGKNNMSYAPALE 451
L Y + D++S GI+ +E+V G+ P L+
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 277
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 114/204 (55%), Gaps = 21/204 (10%)
Query: 248 IGEGGFGPVYKGQL-ADG---TIIAVKQLSSK-SRQGNREFLNEIAMISCLQHPNLVKIH 302
IG G FG V +G+L A G + +A+K L + + REFL+E +++ +HPN++++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL--GIARGLAFLHEES 360
G ++++ E+MEN +L F R N + + Q + + GIA G+ +L E S
Sbjct: 84 GVVTNSMPVMILTEFMENGALDS--FLRLN---DGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE---GDKTHISTRIAGTIG--YMAPEY 415
VHRD+ A N+L++ +L K+SDFGL++ E D T S+ + G I + APE
Sbjct: 139 ---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS-LGGKIPIRWTAPEA 194
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
+ T +D +S+GIV E++S
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 199 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 241
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 33/229 (14%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADG-------TIIAVKQLSSK-SRQGNREFLNEIAMIS 291
NN + + IGEG FG V++ + A G T++AVK L + S +F E A+++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYM---ENNSLACALFGRENCEL-ELDWPTR----- 342
+PN+VK+ G C G + L++EYM + N ++ C L D TR
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 343 ---------QKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 391
+++C+ +A G+A+L E K VHRD+ N L+ ++ KI+DFGL++
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 392 -LDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ D A I +M PE + T ++DV+++G+V EI S
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G FG VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 192 DVWAFGVLLWEIAT--YGMSPYPGID---------------PSQVYELLEKDYRMERPEG 234
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 235 CPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 199 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 241
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 195 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 237
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 194 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 236
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 31/306 (10%)
Query: 207 YYLRTKRHKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTI 266
+Y KR+K T + +S + + + K+G G +G VY+G ++
Sbjct: 233 HYPAPKRNKPTVY-------GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL 285
Query: 267 -IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAC 325
+AVK L + + EFL E A++ ++HPNLV++ G C ++ E+M +L
Sbjct: 286 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 344
Query: 326 ALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKIS 385
L RE E++ + I+ + +L +++ +HR++ A N L+ + K++
Sbjct: 345 YL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVA 399
Query: 386 DFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMS 445
DFGL++L GD I + APE + + K+DV++FG++ EI + MS
Sbjct: 400 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT--YGMS 457
Query: 446 YAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLR 505
P ++ ++ EL+++ + + E++ ++ C +PS R
Sbjct: 458 PYPGIDLS---------------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 502
Query: 506 PTMSEV 511
P+ +E+
Sbjct: 503 PSFAEI 508
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 194 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 236
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 196 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 238
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 199 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 241
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 92 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 146
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 207 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 249
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 250 CPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 80 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 195 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 237
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 31/306 (10%)
Query: 207 YYLRTKRHKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTI 266
+Y KR+K T + +S + + + K+G G +G VY+G ++
Sbjct: 191 HYPAPKRNKPTVY-------GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL 243
Query: 267 -IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAC 325
+AVK L + + EFL E A++ ++HPNLV++ G C ++ E+M +L
Sbjct: 244 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 302
Query: 326 ALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKIS 385
L RE E++ + I+ + +L +++ +HR++ A N L+ + K++
Sbjct: 303 YL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVA 357
Query: 386 DFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMS 445
DFGL++L GD I + APE + + K+DV++FG++ EI + MS
Sbjct: 358 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT--YGMS 415
Query: 446 YAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLR 505
P ++ ++ EL+++ + + E++ ++ C +PS R
Sbjct: 416 PYPGIDLS---------------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 460
Query: 506 PTMSEV 511
P+ +E+
Sbjct: 461 PSFAEI 466
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 83 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 137
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 198 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 240
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 196 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 238
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 199 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 241
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E++ + I+ + +L +++ +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 196 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 238
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 194 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 236
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 194 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 236
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 194 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 236
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 194 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 236
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 199 DVWAFGVLLWEIAT--YGMSPYPGIDL---------------SQVYELLEKDYRMERPEG 241
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 192 DVWAFGVLLWEIAT--YGMSPYPGID---------------PSQVYELLEKDYRMERPEG 234
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 235 CPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 136/304 (44%), Gaps = 56/304 (18%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGN-REFLNEIAMISC 292
N K +GEG FG V K A T +AVK L + R+ L+E ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL--------------ELD 338
+ HP+++K++G C + LLL+ EY + SL F RE+ ++ LD
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG--FLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 339 WPTRQKICLG--------IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 390
P + + +G I++G+ +L E K+VHRD+ A N+L+ KISDFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 391 KLDEGDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYA 447
+ D ++ R G I +MA E T ++DV+SFG++ EIV+ G N
Sbjct: 198 R-DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 448 PALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPT 507
P +L + G +E D +E M ++ L C P RP
Sbjct: 257 PPERL---------FNLLKTGHRMERPDNC---------SEEMYRLMLQCWKQEPDKRPV 298
Query: 508 MSEV 511
+++
Sbjct: 299 FADI 302
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 136/304 (44%), Gaps = 56/304 (18%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGN-REFLNEIAMISC 292
N K +GEG FG V K A T +AVK L + R+ L+E ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL--------------ELD 338
+ HP+++K++G C + LLL+ EY + SL F RE+ ++ LD
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG--FLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 339 WPTRQKICLG--------IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 390
P + + +G I++G+ +L E K+VHRD+ A N+L+ KISDFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 391 KLDEGDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYA 447
+ D ++ R G I +MA E T ++DV+SFG++ EIV+ G N
Sbjct: 198 R-DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 448 PALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPT 507
P +L + G +E D +E M ++ L C P RP
Sbjct: 257 PPERL---------FNLLKTGHRMERPDNC---------SEEMYRLMLQCWKQEPDKRPV 298
Query: 508 MSEV 511
+++
Sbjct: 299 FADI 302
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K FD +K+GEG +G VYK G I+A+KQ+ +S +E + EI+++
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCD 82
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
P++VK +G + L +V EY S++ + R E + T I +GL
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---ILQSTLKGLE 139
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
+LH + +HRDIKA N+LL+ + + K++DFG+A D + GT +MAPE
Sbjct: 140 YLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAG-QLTDXMAKRNXVIGTPFWMAPE 195
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGK 441
AD++S GI A+E+ GK
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 31/306 (10%)
Query: 207 YYLRTKRHKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTI 266
+Y KR+K T + +S + + + K+G G +G VY+G ++
Sbjct: 194 HYPAPKRNKPTIY-------GVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL 246
Query: 267 -IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLAC 325
+AVK L + + EFL E A++ ++HPNLV++ G C ++ E+M +L
Sbjct: 247 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 305
Query: 326 ALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKIS 385
L RE E+ + I+ + +L +++ +HR++ A N L+ + K++
Sbjct: 306 YL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVA 360
Query: 386 DFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMS 445
DFGL++L GD I + APE + + K+DV++FG++ EI + MS
Sbjct: 361 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT--YGMS 418
Query: 446 YAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLR 505
P ++ ++ EL+++ + + E++ ++ C +PS R
Sbjct: 419 PYPGIDLS---------------QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 463
Query: 506 PTMSEV 511
P+ +E+
Sbjct: 464 PSFAEI 469
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 38/276 (13%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ FL
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LD-EGDKTHISTRIAGTIGYMAPEY 415
+ K VHRD+ A N +LD K++DFGLA+ LD E D H T + +MA E
Sbjct: 153 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ--- 259
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 260 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 21/204 (10%)
Query: 248 IGEGGFGPVYKGQLA----DGTIIAVKQLSSK-SRQGNREFLNEIAMISCLQHPNLVKIH 302
IG G FG V G L +A+K L S + + R+FL+E +++ HPN++ +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL--GIARGLAFLHEES 360
G + ++++ E+MEN SL F R+N + + Q + + GIA G+ +L +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDS--FLRQN---DGQFTVIQLVGMLRGIAAGMKYLAD-- 127
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEGDKTHISTRIAGTIG--YMAPEY 415
VHR + A N+L++ +L K+SDFGL++ D D T+ S + G I + APE
Sbjct: 128 -MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA-LGGKIPIRWTAPEA 185
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
+ T +DV+S+GIV E++S
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY+G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
++ E+M +L L RE E+ + I+ + +L +++ +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ ++ EL+++ + +
Sbjct: 192 DVWAFGVLLWEIAT--YGMSPYPGID---------------PSQVYELLEKDYRMERPEG 234
Query: 486 EAERMIKVSLLCTNASPSLRPTMSEV 511
E++ ++ C +PS RP+ +E+
Sbjct: 235 CPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 28/258 (10%)
Query: 267 IAVKQLS-SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNS--- 322
+A+K+++ K + E L EI +S HPN+V + V D+L LV + + S
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 323 -LACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN 381
+ + E+ LD T I + GL +LH+ + +HRD+KA N+LL D +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 382 PKISDFGLAKL--DEGDKTHISTR--IAGTIGYMAPEYA--LWGYLTYKADVYSFGIVAL 435
+I+DFG++ GD T R GT +MAPE + GY +KAD++SFGI A+
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAI 213
Query: 436 EIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVE--LVDERLGSKYKKEEAERMIKV 493
E+ +G P ++ LQ D +E + D+ + KY K +MI
Sbjct: 214 ELATGAAPYHKYPPMKV-------LMLTLQNDPPSLETGVQDKEMLKKYGK-SFRKMIS- 264
Query: 494 SLLCTNASPSLRPTMSEV 511
LC P RPT +E+
Sbjct: 265 --LCLQKDPEKRPTAAEL 280
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 136/304 (44%), Gaps = 56/304 (18%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL------ADGTIIAVKQLSSKSRQGN-REFLNEIAMISC 292
N K +GEG FG V K A T +AVK L + R+ L+E ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL--------------ELD 338
+ HP+++K++G C + LLL+ EY + SL F RE+ ++ LD
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG--FLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 339 WPTRQKICLG--------IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 390
P + + +G I++G+ +L E S +VHRD+ A N+L+ KISDFGL+
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLS 197
Query: 391 KLDEGDKTHISTRIAGTIG--YMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYA 447
+ D ++ R G I +MA E T ++DV+SFG++ EIV+ G N
Sbjct: 198 R-DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 448 PALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPT 507
P +L + G +E D +E M ++ L C P RP
Sbjct: 257 PPERL---------FNLLKTGHRMERPDNC---------SEEMYRLMLQCWKQEPDKRPV 298
Query: 508 MSEV 511
+++
Sbjct: 299 FADI 302
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 28/258 (10%)
Query: 267 IAVKQLS-SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNS--- 322
+A+K+++ K + E L EI +S HPN+V + V D+L LV + + S
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 323 -LACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN 381
+ + E+ LD T I + GL +LH+ + +HRD+KA N+LL D +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 382 PKISDFGLAKL--DEGDKTHISTR--IAGTIGYMAPEY--ALWGYLTYKADVYSFGIVAL 435
+I+DFG++ GD T R GT +MAPE + GY +KAD++SFGI A+
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAI 218
Query: 436 EIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVE--LVDERLGSKYKKEEAERMIKV 493
E+ +G P ++ LQ D +E + D+ + KY K +MI
Sbjct: 219 ELATGAAPYHKYPPMKV-------LMLTLQNDPPSLETGVQDKEMLKKYGK-SFRKMIS- 269
Query: 494 SLLCTNASPSLRPTMSEV 511
LC P RPT +E+
Sbjct: 270 --LCLQKDPEKRPTAAEL 285
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 38/276 (13%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ FL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIAGTIGYMAPEY 415
+ K VHRD+ A N +LD K++DFGLA+ E D H T + +MA E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ--- 258
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 259 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 38/276 (13%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ FL
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIAGTIGYMAPEY 415
+ K VHRD+ A N +LD K++DFGLA+ E D H T + +MA E
Sbjct: 157 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ--- 263
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 264 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 38/276 (13%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ FL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIAGTIGYMAPEY 415
+ K VHRD+ A N +LD K++DFGLA+ E D H T + +MA E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ--- 258
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 259 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 38/276 (13%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ FL
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIAGTIGYMAPEY 415
+ K VHRD+ A N +LD K++DFGLA+ E D H T + +MA E
Sbjct: 153 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ--- 259
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 260 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 38/276 (13%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ FL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIAGTIGYMAPEY 415
+ K VHRD+ A N +LD K++DFGLA+ E D H T + +MA E
Sbjct: 150 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ--- 256
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 257 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 38/276 (13%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ FL
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIAGTIGYMAPEY 415
+ K VHRD+ A N +LD K++DFGLA+ E D H T + +MA E
Sbjct: 211 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ--- 317
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 318 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 32/269 (11%)
Query: 247 KIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VY G ++ +AVK L + + EFL E A++ ++HPNLV++ G C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
+V EYM +L L RE E+ + I+ + +L +++ +
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLEKKN---FI 152
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKA 425
HRD+ A N L+ + K++DFGL++L GD I + APE + + K+
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 426 DVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSKYKKE 485
DV++FG++ EI + MS P ++ L Q L+E Y+ E
Sbjct: 213 DVWAFGVLLWEIAT--YGMSPYPGID------------LSQVYDLLE-------KGYRME 251
Query: 486 EAE----RMIKVSLLCTNASPSLRPTMSE 510
+ E ++ ++ C SP+ RP+ +E
Sbjct: 252 QPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 14/208 (6%)
Query: 247 KIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
KIGEG G V + G +AVK++ + +Q NE+ ++ H N+V ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
+ GD+L +V E++E +L + E ++ +CL + R L++LH + ++
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQG---VI 163
Query: 366 HRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY-- 423
HRDIK+ ++LL D K+SDFG + + GT +MAPE + L Y
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCA-QVSKEVPKRKXLVGTPYWMAPE--VISRLPYGT 220
Query: 424 KADVYSFGIVALEIVSGKNNMSYAPALE 451
+ D++S GI+ +E++ G+ P L+
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPPLQ 248
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 114/212 (53%), Gaps = 14/212 (6%)
Query: 237 AATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREF-LNEIAMISCLQ 294
++++ F +K+G G + VYKG G +A+K++ S +G + EI+++ L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENN---SLACALFGRENCELELDWPTRQKICLGIAR 351
H N+V+++ ++L LV+E+M+N+ + G LEL+ + + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELN--LVKYFQWQLLQ 119
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYM 411
GLAF HE KI+HRD+K N+L+++ K+ DFGLA+ S+ + T+ Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYR 175
Query: 412 APEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
AP+ L G TY D++S G + E+++GK
Sbjct: 176 APD-VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 240 NNFDSAKKIGE-GGFGPVYKGQLADGTIIAV-KQLSSKSRQGNREFLNEIAMISCLQHPN 297
N D + IGE G FG VYK Q + +++A K + +KS + +++ EI +++ HPN
Sbjct: 9 NPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 68
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTR----QKICLGIARGL 353
+VK+ + L ++ E+ CA + LEL+ P Q +C L
Sbjct: 69 IVKLLDAFYYENNLWILIEF-------CAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 121
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR--IAGTIGYM 411
+LH+ KI+HRD+KA N+L D + K++DFG++ + +T I R GT +M
Sbjct: 122 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTXIQRRDSFIGTPYWM 176
Query: 412 APEYALWGY-----LTYKADVYSFGIVALEI 437
APE + YKADV+S GI +E+
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 10/201 (4%)
Query: 242 FDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
DS KIGEG G V + G +AVK + + +Q NE+ ++ QH N+V+
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + G++L ++ E+++ +L + ++ L+ +C + + LA+LH +
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQG 161
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
++HRDIK+ ++LL D K+SDFG D + GT +MAPE
Sbjct: 162 ---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSL 217
Query: 421 LTYKADVYSFGIVALEIVSGK 441
+ D++S GI+ +E+V G+
Sbjct: 218 YATEVDIWSLGIMVIEMVDGE 238
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 242 FDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLV 299
++ +++G GGFG V + D G +A+KQ + NRE + EI ++ L HPN+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 300 KIHGC------CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
D LL EY E L L ENC + P R + I+ L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSAL 134
Query: 354 AFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+LHE +I+HRD+K N++L + L KI D G AK E D+ + T GT+ Y
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQY 189
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+APE T D +SFG +A E ++G
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 242 FDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLV 299
++ +++G GGFG V + D G +A+KQ + NRE + EI ++ L HPN+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 300 KIHGC------CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
D LL EY E L L ENC + P R + I+ L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSAL 135
Query: 354 AFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+LHE +I+HRD+K N++L + L KI D G AK E D+ + T GT+ Y
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQY 190
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+APE T D +SFG +A E ++G
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 25/203 (12%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAV-KQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G+G FG VYK Q + +++A K + +KS + +++ EI +++ HPN+VK+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTR----QKICLGIARGLAFLHEESR 361
+ L ++ E+ CA + LEL+ P Q +C L +LH+
Sbjct: 104 YYENNLWILIEF-------CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN-- 154
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR--IAGTIGYMAPEYALWG 419
KI+HRD+KA N+L D + K++DFG++ + I R GT +MAPE +
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 420 Y-----LTYKADVYSFGIVALEI 437
YKADV+S GI +E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 25/203 (12%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAV-KQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G+G FG VYK Q + +++A K + +KS + +++ EI +++ HPN+VK+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTR----QKICLGIARGLAFLHEESR 361
+ L ++ E+ CA + LEL+ P Q +C L +LH+
Sbjct: 104 YYENNLWILIEF-------CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN-- 154
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR--IAGTIGYMAPEYALWG 419
KI+HRD+KA N+L D + K++DFG++ + I R GT +MAPE +
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 420 Y-----LTYKADVYSFGIVALEI 437
YKADV+S GI +E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 25/203 (12%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAV-KQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G+G FG VYK Q + +++A K + +KS + +++ EI +++ HPN+VK+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTR----QKICLGIARGLAFLHEESR 361
+ L ++ E+ CA + LEL+ P Q +C L +LH+
Sbjct: 104 YYENNLWILIEF-------CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN-- 154
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR--IAGTIGYMAPEYALWG 419
KI+HRD+KA N+L D + K++DFG++ + I R GT +MAPE +
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 420 Y-----LTYKADVYSFGIVALEI 437
YKADV+S GI +E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 257
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 258 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELEL--DWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYM 411
+A+L+ + K VHRD+ A N ++ D KI DFG+ + + E D + + +M
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLV 471
APE G T +D++SFG+V EI S ++ P +L + DG +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYL 251
Query: 472 ELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ D ER+ + +C +P++RPT E+
Sbjct: 252 DQPDNC---------PERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 174
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 24/220 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGN---REFLNEIAMISCLQHPN 297
F ++IG G FG VY + + + ++A+K++S +Q N ++ + E+ + L+HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 298 LVKIHGCCVEGDQLLLVYEY-MENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
++ GC + LV EY + + S + + E+E+ + G +GLA+L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYL 170
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H + ++HRD+KA N+LL K+ DFG A + + GT +MAPE
Sbjct: 171 HSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVI 222
Query: 417 LW---GYLTYKADVYSFGIVALEIVSGKN---NMSYAPAL 450
L G K DV+S GI +E+ K NM+ AL
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 262
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 32/247 (12%)
Query: 220 MKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-S 273
M E+ Q + LK+ F K +G G FG VYKG + +G +A+K+L
Sbjct: 3 MGEAPNQALLRILKE-----TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 57
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN 332
+ S + N+E L+E +++ + +P++ ++ G C+ L+ M+ C L + RE+
Sbjct: 58 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREH 113
Query: 333 -----CELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF 387
+ L+W C+ IA+G+ +L + ++VHRD+ A NVL+ + KI+DF
Sbjct: 114 KDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 164
Query: 388 GLAK-LDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMS 445
GLAK L +K + + I +MA E L T+++DV+S+G+ E+++ G
Sbjct: 165 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 446 YAPALEF 452
PA E
Sbjct: 225 GIPASEI 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 144 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 250
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 251 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 279
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 147 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 253
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 254 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 282
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 258
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 259 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 170 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 276
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 277 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 305
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 171 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 277
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 278 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 306
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 24/220 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGN---REFLNEIAMISCLQHPN 297
F ++IG G FG VY + + + ++A+K++S +Q N ++ + E+ + L+HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 298 LVKIHGCCVEGDQLLLVYEY-MENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
++ GC + LV EY + + S + + E+E+ + G +GLA+L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYL 131
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H + ++HRD+KA N+LL K+ DFG A + + GT +MAPE
Sbjct: 132 HSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVI 183
Query: 417 LW---GYLTYKADVYSFGIVALEIVSGKN---NMSYAPAL 450
L G K DV+S GI +E+ K NM+ AL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 150 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 256
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 257 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 258
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 259 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 149 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 255
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 256 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 284
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIARG 352
N+VK+ ++L LV+E++ + A AL G + P + + +G
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQG 119
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
LAF H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y A
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 175
Query: 413 PEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
PE L Y + D++S G + E+V+ +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 40/277 (14%)
Query: 248 IGEGGFGPVYKGQLAD--GTII--AVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
IG G FG VY G L D G I AVK L+ + G +FL E ++ HPN++ +
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 303 GCCVEGD-QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFLHE 358
G C+ + L+V YM++ L R E PT + + L +A+G+ +L
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDL------RNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK----THISTRIAGTIGYMAPE 414
+ K VHRD+ A N +LD K++DFGLA+ D DK H T + +MA E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 415 YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
T K+DV+SFG++ E+++ + Y FD T +L Q +L++
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDIT------VYLLQGRRLLQ-- 257
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + +V L C + +RP+ SE+
Sbjct: 258 --------PEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 34/280 (12%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELEL--DWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYM 411
+A+L+ + K VHRD+ A N ++ D KI DFG+ + + E D + + +M
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLV 471
APE G T +D++SFG+V EI S ++ P +L + DG +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYL 251
Query: 472 ELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ D ER+ + +C +P +RPT E+
Sbjct: 252 DQPDNC---------PERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 34/280 (12%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELE--LDWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYM 411
+A+L+ + K VHRD+ A N ++ D KI DFG+ + + E D + + +M
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLV 471
APE G T +D++SFG+V EI S ++ P +L + DG +
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYL 248
Query: 472 ELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ D ER+ + +C +P +RPT E+
Sbjct: 249 DQPDNC---------PERVTDLMRMCWQFNPKMRPTFLEI 279
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 77 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 76 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 125
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 126 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 79 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 129 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 75 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 11/201 (5%)
Query: 245 AKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
+ +IG G FG VYKG+ + + ++ + + + F NE+A++ +H N++ G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 305 CVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
+ D L +V ++ E +SL L +E + I A+G+ +LH ++ I
Sbjct: 101 MTK-DNLAIVTQWCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAKN---I 153
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTRIAGTIGYMAPEYALW---GY 420
+HRD+K+ N+ L L KI DFGLA + + + G++ +MAPE
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 421 LTYKADVYSFGIVALEIVSGK 441
++++DVYS+GIV E+++G+
Sbjct: 214 FSFQSDVYSYGIVLYELMTGE 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD---LKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 21/201 (10%)
Query: 247 KIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G+G FG VYK + + G + A K + +KS + +++ EI +++ HP +VK+ G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDW----PTRQKICLGIARGLAFLHEESR 361
+L ++ E+ ++ + LELD P Q +C + L FLH +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIM-------LELDRGLTEPQIQVVCRQMLEALNFLHSK-- 136
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+I+HRD+KA NVL+ + + +++DFG++ + + I GT +MAPE + +
Sbjct: 137 -RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETM 194
Query: 422 T-----YKADVYSFGIVALEI 437
YKAD++S GI +E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQL---ADG---TIIAVKQLSSKSRQGNRE-FL 284
LK+I + F +++GE FG VYKG L A G +A+K L K+ RE F
Sbjct: 3 LKEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 285 NEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGR------------EN 332
+E + + LQHPN+V + G + L +++ Y + L L R
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 333 CELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK- 391
+ L+ P + IA G+ +L S +VH+D+ NVL+ LN KISD GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 392 LDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALE 451
+ D + I +MAPE ++G + +D++S+G+V E+ SY
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV------FSYG---- 227
Query: 452 FDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
L + + QD +VE++ R + + + + C N PS RP ++
Sbjct: 228 -----LQPYCGYSNQD--VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIARG 352
N+VK+ ++L LV+E++ + A AL G + P + + +G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQG 115
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L+F H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y A
Sbjct: 116 LSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 171
Query: 413 PEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
PE L Y + D++S G + E+V+ +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ S+ F + + P + + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 174
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 21/201 (10%)
Query: 247 KIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G+G FG VYK + + G + A K + +KS + +++ EI +++ HP +VK+ G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDW----PTRQKICLGIARGLAFLHEESR 361
+L ++ E+ ++ + LELD P Q +C + L FLH +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIM-------LELDRGLTEPQIQVVCRQMLEALNFLHSK-- 128
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+I+HRD+KA NVL+ + + +++DFG++ + + I GT +MAPE + +
Sbjct: 129 -RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETM 186
Query: 422 T-----YKADVYSFGIVALEI 437
YKAD++S GI +E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ S+ F + + P + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 176
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 42/300 (14%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQL---ADG---TIIAVKQLSSKSRQGNRE-FL 284
LK+I + F +++GE FG VYKG L A G +A+K L K+ RE F
Sbjct: 20 LKEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 285 NEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGR------------EN 332
+E + + LQHPN+V + G + L +++ Y + L L R
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 333 CELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK- 391
+ L+ P + IA G+ +L S +VH+D+ NVL+ LN KISD GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 392 LDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALE 451
+ D + I +MAPE ++G + +D++S+G+V E+ SY
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV------FSYG---- 244
Query: 452 FDCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
L + + QD +VE++ R + + + + C N PS RP ++
Sbjct: 245 -----LQPYCGYSNQD--VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 13/203 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS-SKSRQG-NREFLNEIAMISCLQHPNLV 299
+ +KIGEG +G VYK Q G A+K++ K +G + EI+++ L+H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
K++ +L+LV+E+++ + L L + CE L+ T + L + G+A+ H+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD-LKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWG 419
+++HRD+K N+L++R+ KI+DFGLA+ G T T+ Y AP+ L G
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPD-VLMG 174
Query: 420 YLTYKA--DVYSFGIVALEIVSG 440
Y D++S G + E+V+G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 176
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 13/203 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS-SKSRQG-NREFLNEIAMISCLQHPNLV 299
+ +KIGEG +G VYK Q G A+K++ K +G + EI+++ L+H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
K++ +L+LV+E+++ + L L + CE L+ T + L + G+A+ H+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD-LKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWG 419
+++HRD+K N+L++R+ KI+DFGLA+ G T T+ Y AP+ L G
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPD-VLMG 174
Query: 420 YLTYKA--DVYSFGIVALEIVSG 440
Y D++S G + E+V+G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ S+ F + + P + + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 175
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 32/247 (12%)
Query: 220 MKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-S 273
M E+ Q + LK+ F K +G G FG VYKG + +G +A+K+L
Sbjct: 3 MGEAPNQALLRILKE-----TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 57
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN 332
+ S + N+E L+E +++ + +P++ ++ G C+ + L+ + M C L + RE+
Sbjct: 58 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREH 113
Query: 333 -----CELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF 387
+ L+W C+ IA+G+ +L + ++VHRD+ A NVL+ + KI+DF
Sbjct: 114 KDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 164
Query: 388 GLAK-LDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMS 445
GLAK L +K + + I +MA E L T+++DV+S+G+ E+++ G
Sbjct: 165 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 446 YAPALEF 452
PA E
Sbjct: 225 GIPASEI 231
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIA 350
HPN+VK+ ++L LV+E++ + A AL G + P + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLL 113
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+GLAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 411 MAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
APE L Y + D++S G + E+V+ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 32/247 (12%)
Query: 220 MKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-S 273
M E+ Q + LK+ F K +G G FG VYKG + +G +A+K+L
Sbjct: 3 MGEAPNQALLRILKE-----TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 57
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN 332
+ S + N+E L+E +++ + +P++ ++ G C+ + L+ + M C L + RE+
Sbjct: 58 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREH 113
Query: 333 -----CELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF 387
+ L+W C+ IA+G+ +L + ++VHRD+ A NVL+ + KI+DF
Sbjct: 114 KDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 164
Query: 388 GLAK-LDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMS 445
GLAK L +K + + I +MA E L T+++DV+S+G+ E+++ G
Sbjct: 165 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 446 YAPALEF 452
PA E
Sbjct: 225 GIPASEI 231
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIA 350
HPN+VK+ ++L LV+E++ + A AL G + P + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLL 113
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+GLAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 411 MAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
APE L Y + D++S G + E+V+ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 173
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 32/247 (12%)
Query: 220 MKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-S 273
M E+ Q + LK+ F K +G G FG VYKG + +G +A+K+L
Sbjct: 3 MGEAPNQALLRILKE-----TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 57
Query: 274 SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN 332
+ S + N+E L+E +++ + +P++ ++ G C+ + L+ + M C L + RE+
Sbjct: 58 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREH 113
Query: 333 -----CELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF 387
+ L+W C+ IA+G+ +L + ++VHRD+ A NVL+ + KI+DF
Sbjct: 114 KDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDF 164
Query: 388 GLAK-LDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMS 445
GLAK L +K + + I +MA E L T+++DV+S+G+ E+++ G
Sbjct: 165 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
Query: 446 YAPALEF 452
PA E
Sbjct: 225 GIPASEI 231
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ S+ F + + P + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 176
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 173
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIA 350
HPN+VK+ ++L LV+E++ + A AL G + P + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG-------IPLPLIKSYLFQLL 113
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+GLAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 169
Query: 411 MAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
APE L Y + D++S G + E+V+ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL-----ADGTI-IAVKQLSSKSRQGNRE-FLNEIAMISC 292
NN K +G G FG V + D + +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 293 L-QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---- 347
L QH N+V + G C G +L++ EY L F R E +LD + + L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN--FLRRKAEADLDKEDGRPLELRDLL 163
Query: 348 ----GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR 403
+A+G+AFL ++ +HRD+ A NVLL KI DFGLA+ D +I
Sbjct: 164 HFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 220
Query: 404 IAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
A + +MAPE T ++DV+S+GI+ EI S
Sbjct: 221 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 174
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL-----ADGTI-IAVKQLSSKSRQGNRE-FLNEIAMISC 292
NN K +G G FG V + D + +AVK L S + +E ++E+ ++S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 293 L-QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---- 347
L QH N+V + G C G +L++ EY L F R E +LD + + L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN--FLRRKAEADLDKEDGRPLELRDLL 155
Query: 348 ----GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR 403
+A+G+AFL ++ +HRD+ A NVLL KI DFGLA+ D +I
Sbjct: 156 HFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 212
Query: 404 IAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
A + +MAPE T ++DV+S+GI+ EI S
Sbjct: 213 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIA 350
HPN+VK+ ++L LV+E++ + A AL G + P + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLL 115
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+GLAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 171
Query: 411 MAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
APE L Y + D++S G + E+V+ +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 13/203 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGTIIAVKQLS-SKSRQG-NREFLNEIAMISCLQHPNLV 299
+ +KIGEG +G VYK Q G A+K++ K +G + EI+++ L+H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
K++ +L+LV+E+++ + L L + CE L+ T + L + G+A+ H+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD-LKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWG 419
+++HRD+K N+L++R+ KI+DFGLA+ G T T+ Y AP+ L G
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPD-VLMG 174
Query: 420 YLTYKA--DVYSFGIVALEIVSG 440
Y D++S G + E+V+G
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIA 350
HPN+VK+ ++L LV+E++ + A AL G + P + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLL 114
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+GLAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 170
Query: 411 MAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
APE L Y + D++S G + E+V+ +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+ + L +++ + EI+++ L HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIARG 352
N+VK+ ++L LV+E++ + A AL G + P + + +G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQG 115
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
LAF H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y A
Sbjct: 116 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 171
Query: 413 PEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
PE L Y + D++S G + E+V+ +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+ + L +++ + EI+++ L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIARG 352
N+VK+ ++L LV+E++ + A AL G + P + + +G
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQG 114
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
LAF H +++HRD+K N+L++ + K++DFGLA+ G T T+ Y A
Sbjct: 115 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRA 170
Query: 413 PEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
PE L Y + D++S G + E+V+ +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 224
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 177
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 19/212 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIA 350
HPN+VK+ ++L LV+E++ + A AL G + P + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLL 115
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+GLAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 171
Query: 411 MAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
APE L Y + D++S G + E+V+ +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 176
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 77 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 175
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN+VK+ ++L LV+E++ + F + + P + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
F H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPE 176
Query: 415 YAL-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 69 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 118
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 119 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 85 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 134
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 135 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 192 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 238
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 100 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 150 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 207 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 253
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 34/280 (12%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELEL--DWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYM 411
+A+L+ + K VHRD+ A N ++ D KI DFG+ + + E D + + +M
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLV 471
APE G T +D++SFG+V EI S ++ P +L + DG +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYL 251
Query: 472 ELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ D ER+ + +C +P +RPT E+
Sbjct: 252 DQPDNC---------PERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 81 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 130
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 131 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 188 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 234
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+VK+ ++L LV+E++ + F + + P + + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD---LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H +++HRD+K N+L++ + K++DFGLA+ G T+ Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 417 L-WGYLTYKADVYSFGIVALEIVSGK 441
L Y + D++S G + E+V+ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIARG 352
N+VK+ ++L LV+E++ + A AL G + P + + +G
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQG 116
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
LAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y A
Sbjct: 117 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWYRA 172
Query: 413 PEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
PE L Y + D++S G + E+V+ +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 82 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 34/280 (12%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELE--LDWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYM 411
+A+L+ + K VHRD+ A N ++ D KI DFG+ + + E D + + +M
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLV 471
APE G T +D++SFG+V EI S ++ P +L + DG +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYL 250
Query: 472 ELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ D ER+ + +C +P +RPT E+
Sbjct: 251 DQPDNC---------PERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 164 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 255
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 140 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 231
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 132 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 224
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 131 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 222
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 138 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 229
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 139 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 227
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 137 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 19/212 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCLQ 294
+ NF +KIGEG +G VYK + G ++A+K+ L +++ + EI+++ L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSL----ACALFGRENCELELDWPTRQKICLGIA 350
HPN+VK+ ++L LV+E+++ + A AL G + P + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG-------IPLPLIKSYLFQLL 116
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+GLAF H +++HRD+K N+L++ + K++DFGLA+ G T+ Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLWY 172
Query: 411 MAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
APE L Y + D++S G + E+V+ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K + G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 82 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 242
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 79 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFG AK L +K + +
Sbjct: 129 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 77 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFG AK L +K + +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 242
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ L+ M+ C L + RE+ + L+W C+
Sbjct: 77 DNPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFG AK L +K + +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 114/219 (52%), Gaps = 21/219 (9%)
Query: 245 AKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCLQHPNL 298
K +G G FG VYKG + DG +A+K L + S + N+E L+E +++ + P +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKICLGIARGLAF 355
++ G C+ + LV + M L + GR + L+W C+ IA+G+++
Sbjct: 82 SRLLGICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSY 134
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT-IGYMAPE 414
L + ++VHRD+ A NVL+ + KI+DFGLA+L + D+T I +MA E
Sbjct: 135 LED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 415 YALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
L T+++DV+S+G+ E+++ G PA E
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L +D + I +G+ +L
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE---RIDHIKLLQYTSQICKGMEYLGT 135
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 227
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 72 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 121
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 122 QIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 179 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ EY+ SL L + + +D + I +G+ +L
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HR++ N+L++ + KI DFGL K+ DK + + G I + APE
Sbjct: 134 K---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 25/226 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGREN-----CELELDWPTRQKICLG 348
+P++ ++ G C+ + L+ + M L + RE+ + L+W C+
Sbjct: 76 DNPHVCRLLGICLTS-TVQLIMQLMPFGXLLD--YVREHKDNIGSQYLLNW------CVQ 126
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGT 407
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELEL--DWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYM 411
+A+L+ + K VHR++ A N ++ D KI DFG+ + + E D + + +M
Sbjct: 144 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLV 471
APE G T +D++SFG+V EI S ++ P +L + DG +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYL 252
Query: 472 ELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ D ER+ + +C +P++RPT E+
Sbjct: 253 DQPDNC---------PERVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 246 KKIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+++G+G FG V + L D G ++AVK+L + + R+F EI ++ LQH N+VK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 301 IHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
G C + L L+ E++ SL L + + +D + I +G+ +L
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYA 416
+ + +HRD+ N+L++ + KI DFGL K+ DK + G I + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 417 LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ +DV+SFG+V E+ + S +P EF
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEK-SKSPPAEF 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 34/280 (12%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELEL--DWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYM 411
+A+L+ + K VHR++ A N ++ D KI DFG+ + + E D + + +M
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLV 471
APE G T +D++SFG+V EI S ++ P +L + DG +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV----MDGGYL 251
Query: 472 ELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ D ER+ + +C +P++RPT E+
Sbjct: 252 DQPDNC---------PERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 118/226 (52%), Gaps = 25/226 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGREN-----CELELDWPTRQKICLG 348
+P++ ++ G C+ + L+ + M L + RE+ + L+W C+
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLMPFGXLLD--YVREHKDNIGSQYLLNW------CVQ 125
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGT 407
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 15/198 (7%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +A+K + S + EF+ E ++ L H LV+++G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ--KICLGIARGLAFLHEESRFK 363
+ + ++ EYM N L L E+ + T+Q ++C + + +L ES+ +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYL--ESK-Q 140
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+HRD+ A N L++ K+SDFGL++ LD+ + + + ++ + + PE ++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP--VRWSPPEVLMYSKF 198
Query: 422 TYKADVYSFGIVALEIVS 439
+ K+D+++FG++ EI S
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 46/286 (16%)
Query: 246 KKIGEGGFGPVYKGQLAD------GTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNL 298
+++G+G FG VY+G D T +AVK ++ + R EFLNE +++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFG-RENCELEL--DWPTRQ---KICLGIARG 352
V++ G +G L+V E M + L L R E PT Q ++ IA G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-------LDEGDKTHISTRIA 405
+A+L+ + K VHRD+ A N ++ D KI DFG+ + +G K + R
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR-- 197
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQ 465
+MAPE G T +D++SFG+V EI S ++ P +L +
Sbjct: 198 ----WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFV---- 245
Query: 466 QDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
DG ++ D ER+ + +C +P +RPT E+
Sbjct: 246 MDGGYLDQPDNC---------PERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 108/230 (46%), Gaps = 46/230 (20%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNE--IAMISCLQHPN 297
+N + IG G +G VYKG L D +AVK S +RQ F+NE I + ++H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 298 LVKIHGCCVEGDQ---------LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
+ + + GD+ LLV EY N SL L + DW + ++
Sbjct: 69 IARF----IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHS 119
Query: 349 IARGLAFLHEE------SRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-------LDEG 395
+ RGLA+LH E + I HRD+ + NVL+ D ISDFGL+ + G
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 396 DKTHISTRIAGTIGYMAPEYALWGYLTYK--------ADVYSFGIVALEI 437
++ + + GTI YMAPE L G + + D+Y+ G++ EI
Sbjct: 180 EEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+ +L + S + N+E L+E +++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 109 DNPHVCRLLGICLTST-VQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 158
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 159 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 262
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K + G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 31/279 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQ------LSSKSRQGNREFLNEIAMISCL 293
NF KKIG G F VY+ L DG +A+K+ + +K+R + + EI ++ L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA---DCIKEIDLLKQL 89
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
HPN++K + +E ++L +V E + L+ + + + + T K + + L
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAP 413
+H +++HRDIK NV + K+ D GL + KT + + GT YM+P
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF-FSSKTTAAHSLVGTPYYMSP 205
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVEL 473
E +K+D++S G + E+ + ++ Y + C K +E
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPF-YGDKMNLYSLC------------KKIEQ 252
Query: 474 VD-ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
D L S + EE +++ +C N P RP ++ V
Sbjct: 253 CDYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 77 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFG AK L +K + +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K + G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 82 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFGLAK L +K + +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFG AK L +K + +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 27/227 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADG----TIIAVKQL-SSKSRQGNREFLNEIAMISCL 293
F K +G G FG VYKG + +G +A+K+L + S + N+E L+E +++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL-FGREN-----CELELDWPTRQKICL 347
+P++ ++ G C+ + L+ + M C L + RE+ + L+W C+
Sbjct: 82 DNPHVCRLLGICLTS-TVQLITQLM---PFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAG 406
IA+G+ +L + ++VHRD+ A NVL+ + KI+DFG AK L +K + +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEF 452
I +MA E L T+++DV+S+G+ E+++ G PA E
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 235
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 34/221 (15%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L RE LE + P Q
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI--- 400
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 206
Query: 401 --STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+T + +MAPE T+++DV+SFG++ EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL-----ADGTI-IAVKQLSSKSRQGNRE-FLNEIAMISC 292
NN K +G G FG V + D + +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 293 L-QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ--- 343
L QH N+V + G C G +L++ EY L L + LE + P Q
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 344 ----KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH 399
+A+G+AFL ++ +HRD+ A NVLL KI DFGLA+ D +
Sbjct: 166 RDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 400 ISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
I A + +MAPE T ++DV+S+GI+ EI S
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +A+K + S + EF+ E ++ L H LV+++G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ--KICLGIARGLAFLHEESRFK 363
+ + ++ EYM N L L E+ + T+Q ++C + + +L ES+ +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYL--ESK-Q 125
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY 423
+HRD+ A N L++ K+SDFGL++ D+ S + + PE ++ +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 424 KADVYSFGIVALEIVS 439
K+D+++FG++ EI S
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +A+K + S + EF+ E ++ L H LV+++G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ--KICLGIARGLAFLHEESRFK 363
+ + ++ EYM N L L E+ + T+Q ++C + + +L ES+ +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYL--ESK-Q 131
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY 423
+HRD+ A N L++ K+SDFGL++ D+ S + + PE ++ +
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 424 KADVYSFGIVALEIVS 439
K+D+++FG++ EI S
Sbjct: 192 KSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +A+K + S + EF+ E ++ L H LV+++G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ--KICLGIARGLAFLHEESRFK 363
+ + ++ EYM N L L E+ + T+Q ++C + + +L ES+ +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYL--ESK-Q 124
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY 423
+HRD+ A N L++ K+SDFGL++ D+ S + + PE ++ +
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 424 KADVYSFGIVALEIVS 439
K+D+++FG++ EI S
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 220 MKESDLQTISFTLKQIKAATNN-FDSAKKIGEGGFGPVYKGQLADGT--IIAVKQLS-SK 275
M S +Q+ ++ +KA F +KIG+G FG V+KG + + T ++A+K + +
Sbjct: 1 MAHSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEE 59
Query: 276 SRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL 335
+ + EI ++S P + K +G ++ +L ++ EY+ S AL E L
Sbjct: 60 AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS---ALDLLEPGPL 116
Query: 336 ELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEG 395
D I I +GL +LH E + +HRDIKA NVLL K++DFG+A G
Sbjct: 117 --DETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA----G 167
Query: 396 DKTHISTR---IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
T + GT +MAPE KAD++S GI A+E+ G+ S +
Sbjct: 168 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-- 225
Query: 453 DCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
K++ L+ + + ++ + + C N PS RPT E+
Sbjct: 226 ----------------KVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 268
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL-----ADGTI-IAVKQLSSKSRQGNRE-FLNEIAMISC 292
NN K +G G FG V + D + +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 293 L-QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELD---------WPTR 342
L QH N+V + G C G +L++ EY L R++ LE D TR
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 343 QKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI 400
+ +A+G+AFL ++ +HRD+ A NVLL KI DFGLA+ D +I
Sbjct: 165 DLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 401 STRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
A + +MAPE T ++DV+S+GI+ EI S
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +A+K + S + EF+ E ++ L H LV+++G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ--KICLGIARGLAFLHEESRFK 363
+ + ++ EYM N L L E+ + T+Q ++C + + +L ES+ +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYL--ESK-Q 140
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY 423
+HRD+ A N L++ K+SDFGL++ D+ S + + PE ++ +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 424 KADVYSFGIVALEIVS 439
K+D+++FG++ EI S
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +A+K + S + EF+ E ++ L H LV+++G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ--KICLGIARGLAFLHEESRFK 363
+ + ++ EYM N L L E+ + T+Q ++C + + +L ES+ +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYL--ESK-Q 120
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY 423
+HRD+ A N L++ K+SDFGL++ D+ S + + PE ++ +
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 424 KADVYSFGIVALEIVS 439
K+D+++FG++ EI S
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIST 402
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ + D +T
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +MAPE T+++DV+SFG++ EI +
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
K++G G FG V G+ +A+K + S + EF+ E ++ L H LV+++G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ--KICLGIARGLAFLHEESRFK 363
+ + ++ EYM N L L E+ + T+Q ++C + + +L ES+ +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYL--ESK-Q 125
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY 423
+HRD+ A N L++ K+SDFGL++ D+ S + + PE ++ +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 424 KADVYSFGIVALEIVS 439
K+D+++FG++ EI S
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL-----ADGTI-IAVKQLSSKSRQGNRE-FLNEIAMISC 292
NN K +G G FG V + D + +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 293 L-QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELD---------WPTR 342
L QH N+V + G C G +L++ EY L R++ LE D TR
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKSRVLETDPAFAIANSTASTR 164
Query: 343 QKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI 400
+ +A+G+AFL ++ +HRD+ A NVLL KI DFGLA+ D +I
Sbjct: 165 DLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 401 STRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
A + +MAPE T ++DV+S+GI+ EI S
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 132
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 123
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 17/202 (8%)
Query: 248 IGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
+G+G +G VY G+ L++ IA+K++ + + ++ EIA+ L+H N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 307 EGDQLLLVYEYMENNSLACALFGR----ENCELELDWPTRQKICLGIARGLAFLHEESRF 362
E + + E + SL+ L + ++ E + + T+Q I GL +LH+
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN--- 141
Query: 363 KIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+IVHRDIK NVL++ KISDFG +K G T GT+ YMAPE G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPR 200
Query: 422 TY--KADVYSFGIVALEIVSGK 441
Y AD++S G +E+ +GK
Sbjct: 201 GYGKAADIWSLGCTIIEMATGK 222
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 237 AATNNFDSAKKIGEGGFGPV------YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
A N+ K +GEG FG V GQ II K L+ QG E EI+ +
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 67
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
L+HP+++K++ D++++V EY N + + E E ++ I
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----ARRFFQQII 122
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+ + H R KIVHRD+K N+LLD LN KI+DFGL+ + D + T G+ Y
Sbjct: 123 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNY 177
Query: 411 MAPEYALWG--YLTYKADVYSFGIV 433
APE + G Y + DV+S G++
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVI 201
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 17/202 (8%)
Query: 248 IGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
+G+G +G VY G+ L++ IA+K++ + + ++ EIA+ L+H N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 307 EGDQLLLVYEYMENNSLACALFGR----ENCELELDWPTRQKICLGIARGLAFLHEESRF 362
E + + E + SL+ L + ++ E + + T+Q I GL +LH+
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-----ILEGLKYLHDN--- 127
Query: 363 KIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+IVHRDIK NVL++ KISDFG +K G T GT+ YMAPE G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPR 186
Query: 422 TY--KADVYSFGIVALEIVSGK 441
Y AD++S G +E+ +GK
Sbjct: 187 GYGKAADIWSLGCTIIEMATGK 208
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 19/213 (8%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCL 293
+ + +K+GEG +G VYK + + G I+A+K+ L ++ + EI+++ L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENN---SLACALFGRENCELELDWPTRQKICLGIA 350
HPN+V + L LV+E+ME + L G ++ ++++ +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YLYQLL 129
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
RG+A H+ +I+HRD+K N+L++ D K++DFGLA+ G T T+ Y
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA-FGIPVRSYTHEVVTLWY 185
Query: 411 MAPEYALWGYLTY--KADVYSFGIVALEIVSGK 441
AP+ L G Y D++S G + E+++GK
Sbjct: 186 RAPD-VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 37/276 (13%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGT--IIAVKQLS-SKSRQGNREFLNEIAMISCLQHPNL 298
F +KIG+G FG V+KG + + T ++A+K + ++ + EI ++S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
K +G ++ +L ++ EY+ S AL E L D I I +GL +LH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS---ALDLLEPGPL--DETQIATILREILKGLDYLHS 122
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR---IAGTIGYMAPEY 415
E + +HRDIKA NVLL K++DFG+A G T + GT +MAPE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPEV 175
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
KAD++S GI A+E+ G+ S + K++ L+
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------------------KVLFLIP 217
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + ++ + + C N PS RPT E+
Sbjct: 218 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 237 AATNNFDSAKKIGEGGFGPVY------KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
A N+ K +GEG FG V GQ II K L+ QG E EI+ +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 58
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
L+HP+++K++ D++++V EY N + + E E ++ I
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----ARRFFQQII 113
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+ + H R KIVHRD+K N+LLD LN KI+DFGL+ + D + T G+ Y
Sbjct: 114 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNY 168
Query: 411 MAPEYALWG--YLTYKADVYSFGIV 433
APE + G Y + DV+S G++
Sbjct: 169 AAPE-VISGKLYAGPEVDVWSCGVI 192
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 237 AATNNFDSAKKIGEGGFGPV------YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
A N+ K +GEG FG V GQ II K L+ QG E EI+ +
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 68
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
L+HP+++K++ D++++V EY N + + E E ++ I
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----ARRFFQQII 123
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+ + H R KIVHRD+K N+LLD LN KI+DFGL+ + D + T G+ Y
Sbjct: 124 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNY 178
Query: 411 MAPEYALWG--YLTYKADVYSFGIV 433
APE + G Y + DV+S G++
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVI 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 37/276 (13%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGT--IIAVKQLS-SKSRQGNREFLNEIAMISCLQHPNL 298
F +KIG+G FG V+KG + + T ++A+K + ++ + EI ++S P +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
K +G ++ +L ++ EY+ S AL E L D I I +GL +LH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGS---ALDLLEPGPL--DETQIATILREILKGLDYLHS 142
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR---IAGTIGYMAPEY 415
E + +HRDIKA NVLL K++DFG+A G T + GT +MAPE
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNTFVGTPFWMAPEV 195
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
KAD++S GI A+E+ G+ S + K++ L+
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------------------KVLFLIP 237
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + ++ + + C N PS RPT E+
Sbjct: 238 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 125/276 (45%), Gaps = 37/276 (13%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGT--IIAVKQLS-SKSRQGNREFLNEIAMISCLQHPNL 298
F +KIG+G FG V+KG + + T ++A+K + ++ + EI ++S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
K +G ++ +L ++ EY+ S AL E L D I I +GL +LH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS---ALDLLEPGPL--DETQIATILREILKGLDYLHS 122
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR---IAGTIGYMAPEY 415
E + +HRDIKA NVLL K++DFG+A G T + GT +MAPE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNTFVGTPFWMAPEV 175
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVD 475
KAD++S GI A+E+ G+ S + K++ L+
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPM------------------KVLFLIP 217
Query: 476 ERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + ++ + + C N PS RPT E+
Sbjct: 218 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 19/213 (8%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQ--LSSKSRQGNREFLNEIAMISCL 293
+ + +K+GEG +G VYK + + G I+A+K+ L ++ + EI+++ L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENN---SLACALFGRENCELELDWPTRQKICLGIA 350
HPN+V + L LV+E+ME + L G ++ ++++ +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YLYQLL 129
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
RG+A H+ +I+HRD+K N+L++ D K++DFGLA+ G T T+ Y
Sbjct: 130 RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA-FGIPVRSYTHEVVTLWY 185
Query: 411 MAPEYALWGYLTY--KADVYSFGIVALEIVSGK 441
AP+ L G Y D++S G + E+++GK
Sbjct: 186 RAPD-VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 37/290 (12%)
Query: 240 NNFDSAKKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MIS 291
+ + K +G G FG V + + A +AVK L + +R ++E+ +I
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 292 CLQHPNLVKIHGCCVE-GDQLLLVYEYMENNSLACALFGREN-----CELELDWPTRQK- 344
H N+V + G C + G L+++ E+ + +L+ L + N +L D+ T +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 345 IC--LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST 402
IC +A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++
Sbjct: 147 ICYSFQVAKGMEFL--ASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 403 RIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWA 461
A + +MAPE T ++DV+SFG++ EI S S P ++ D +
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEF 256
Query: 462 CHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
C ++G + D Y E M + L C + PS RPT SE+
Sbjct: 257 CRRLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 297
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 237 AATNNFDSAKKIGEGGFGPV------YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
A N+ K +GEG FG V GQ II K L+ QG E EI+ +
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 62
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
L+HP+++K++ D++++V EY N + + E E ++ I
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE-----ARRFFQQII 117
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
+ + H R KIVHRD+K N+LLD LN KI+DFGL+ + D + T G+ Y
Sbjct: 118 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKTS-CGSPNY 172
Query: 411 MAPEYALWG--YLTYKADVYSFGIV 433
APE + G Y + DV+S G++
Sbjct: 173 AAPE-VISGKLYAGPEVDVWSCGVI 196
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 230 FTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR- 281
F + + A ++++G+G FG VY+G +A G + +A+K ++ + R
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 282 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----L 337
EFLNE +++ ++V++ G +G L++ E M L L E+E L
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVL 123
Query: 338 DWPTRQKICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LD 393
P+ K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 394 EGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
E D + + +M+PE G T +DV+SFG+V EI +
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 34/222 (15%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST 402
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 194 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDY 246
Query: 403 RIAGTIG-----YMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T G +MAPE T+++DV+SFG++ EI +
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI--- 400
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 143 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 195
Query: 401 --STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+T + +MAPE T+++DV+SFG++ EI +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI--- 400
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 147 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 199
Query: 401 --STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+T + +MAPE T+++DV+SFG++ EI +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 39/277 (14%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGT--IIAVKQLS-SKSRQGNREFLNEIAMISCLQHPNL 298
F +IG+G FG VYKG + + T ++A+K + ++ + EI ++S P +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
+ G ++ +L ++ EY+ S AL + LE + I I +GL +LH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGS---ALDLLKPGPLEETYIA--TILREILKGLDYLHS 134
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR---IAGTIGYMAPEY 415
E + +HRDIKA NVLL + K++DFG+A G T + GT +MAPE
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPEV 187
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGK-NNMSYAPALEFDCTCLLDWACHLQQDGKLVELV 474
+KAD++S GI A+E+ G+ N P +++ L+
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM-------------------RVLFLI 228
Query: 475 DERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ + + ++ + C N P RPT E+
Sbjct: 229 PKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI--- 400
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 146 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 198
Query: 401 --STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+T + +MAPE T+++DV+SFG++ EI +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI--- 400
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 206
Query: 401 --STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+T + +MAPE T+++DV+SFG++ EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIST 402
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +MAPE T+++DV+SFG++ EI +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 31/227 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQGNRE-FLNEIAMISCL 293
N + K +G G FG V + +AVK L K+ RE ++E+ M++ L
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 294 -QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGREN--CELELDWPTRQKI----- 345
H N+V + G C + L++EY L L + E E+++ ++++
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 346 ----------CLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 393
C +A+G+ FL +S VHRD+ A NVL+ KI DFGLA+
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 394 EGDKTHISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D ++ A + +MAPE G T K+DV+S+GI+ EI S
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 4 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 117 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 247 KIGEGGFGPV---YKGQLAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKI 301
++G+G FG V L D G ++AVKQL R+F EI ++ L +VK
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 302 HGCCV-EGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
G G Q L LV EY+ + L L + LD I +G+ +L
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYAL 417
+ VHRD+ A N+L++ + + KI+DFGLAKL DK + R G I + APE
Sbjct: 134 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 418 WGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ ++DV+SFG+V E+ + + S +P+ EF
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEF 224
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF Y+ D + ++ KS + +E ++ EIA+ L +P++V HG
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I +G+ +LH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN-- 161
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ D++ KI DFGLA E D T + GT Y+APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGH 219
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ D++S G + ++ GK F+ +CL + +++ +E +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKP--------PFETSCLKETYIRIKK--------NEYSVPR 263
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L +A P+LRP+++E+
Sbjct: 264 HINPVASALIRRML---HADPTLRPSVAEL 290
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIST 402
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +MAPE T+++DV+SFG++ EI +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 234 QIKAATNN-------FDSAKKIGEGGFGPVYKGQLADGT--IIAVKQLS-SKSRQGNREF 283
Q+ NN F ++IG+G FG V+KG + + T ++A+K + ++ +
Sbjct: 10 QVPGMQNNIADPEELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDI 68
Query: 284 LNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
EI ++S + K +G ++G +L ++ EY+ S L E ++ ++
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE 128
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR 403
I +GL +LH E + +HRDIKA NVLL + K++DFG+A G T +
Sbjct: 129 -----ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA----GQLTDTQIK 176
Query: 404 ---IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
GT +MAPE KAD++S GI A+E+ G+
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 16/212 (7%)
Query: 236 KAATNNFDSAKK---IGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNREFLNEIAMIS 291
+ A N+F + K +G G FG V+K + A G +A K + ++ + E NEI++++
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR 351
L H NL++++ + ++LV EY++ L + ELD K I
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICE 198
Query: 352 GLAFLHEESRFKIVHRDIKATNVL-LDRDLNP-KISDFGLA-KLDEGDKTHISTRIAGTI 408
G+ +H+ I+H D+K N+L ++RD KI DFGLA + +K ++ GT
Sbjct: 199 GIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTP 252
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + ++++ D++S G++A ++SG
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
+ IG+G FG V G G +AVK + K+ + FL E ++++ L+H NLV++ G
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 306 VEGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
VE L +V EYM SL L R L D K L + + +L E + F
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYL-EGNNF-- 129
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
VHRD+ A NVL+ D K+SDFGL K E T + ++ + + APE + K
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREAAFSTK 185
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EI S
Sbjct: 186 SDVWSFGILLWEIYS 200
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
L ++ F+ + +G G +G VYKG+ + G + A+K + + E EI M+
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINML 74
Query: 291 SCL-QHPNLVKIHGCCVEG------DQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
H N+ +G ++ DQL LV E+ S+ + + L+ +W
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY- 133
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL-AKLDEGDKTHIST 402
IC I RGL+ LH+ K++HRDIK NVLL + K+ DFG+ A+LD
Sbjct: 134 -ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR--TVGRRN 187
Query: 403 RIAGTIGYMAPEYALW-----GYLTYKADVYSFGIVALEIVSG 440
GT +MAPE +K+D++S GI A+E+ G
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG +G V QLA + +AVK + K E + EI + L
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 119 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 247 KIGEGGFGPV---YKGQLAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKI 301
++G+G FG V L D G ++AVKQL R+F EI ++ L +VK
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 302 HGCCV-EGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
G G Q L LV EY+ + L L + LD I +G+ +L
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR 134
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYAL 417
+ VHRD+ A N+L++ + + KI+DFGLAKL DK + R G I + APE
Sbjct: 135 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 418 WGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ ++DV+SFG+V E+ + + S +P+ EF
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEF 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 247 KIGEGGFGPV---YKGQLAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKI 301
++G+G FG V L D G ++AVKQL R+F EI ++ L +VK
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 302 HGCCV-EGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
G G Q L LV EY+ + L L + LD I +G+ +L
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYAL 417
+ VHRD+ A N+L++ + + KI+DFGLAKL DK + R G I + APE
Sbjct: 147 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 418 WGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ ++DV+SFG+V E+ + + S +P+ EF
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEF 237
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
+ IG+G FG V G G +AVK + K+ + FL E ++++ L+H NLV++ G
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 306 VEGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
VE L +V EYM SL L R L D K L + + +L E + F
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYL-EGNNF-- 310
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
VHRD+ A NVL+ D K+SDFGL K E T + ++ + + APE + K
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREKKFSTK 366
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EI S
Sbjct: 367 SDVWSFGILLWEIYS 381
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 132
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGN---REFLNEIA 288
K + K+G GG VY LA+ TI +A+K + R+ + F E+
Sbjct: 7 KIINERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
S L H N+V + E D LV EY+E +L+ + + L +D T
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSE--YIESHGPLSVD--TAINFTNQ 119
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGT 407
I G+ H+ +IVHRDIK N+L+D + KI DFG+AK L E T + + GT
Sbjct: 120 ILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGT 175
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQD 467
+ Y +PE A D+YS GIV E++ G+ + A+ + D ++ D
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTD 235
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
+ IG+G FG V G G +AVK + K+ + FL E ++++ L+H NLV++ G
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 306 VEGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
VE L +V EYM SL L R L D K L + + +L E + F
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYL-EGNNF-- 138
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
VHRD+ A NVL+ D K+SDFGL K E T + ++ + + APE + K
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREKKFSTK 194
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EI S
Sbjct: 195 SDVWSFGILLWEIYS 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 101
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 160
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 161 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 217
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 131
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 125
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
+ IG+G FG V G G +AVK + K+ + FL E ++++ L+H NLV++ G
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 306 VEGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKI 364
VE L +V EYM SL L R L D K L + + +L E + F
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYL-EGNNF-- 123
Query: 365 VHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYK 424
VHRD+ A NVL+ D K+SDFGL K E T + ++ + + APE + K
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREKKFSTK 179
Query: 425 ADVYSFGIVALEIVS 439
+DV+SFGI+ EI S
Sbjct: 180 SDVWSFGILLWEIYS 194
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 131
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 138
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 110/217 (50%), Gaps = 19/217 (8%)
Query: 246 KKIGEGGFGPVY---KGQLADGT--IIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLV 299
+ +GEG FG V DGT ++AVK L + + +R + EI ++ L H +++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 300 KIHGCCVEGD--QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLH 357
K GCC + L LV EY+ SL L R + L Q+IC G+A+LH
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQIC----EGMAYLH 151
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH-ISTRIAGTIGYMAPEY 415
+ +HRD+ A NVLLD D KI DFGLAK + EG + + + + + APE
Sbjct: 152 AQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
Y +DV+SFG+ E+++ ++ S +P +F
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKF 244
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI--- 400
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 206
Query: 401 --STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+T + +MAPE T+++DV+SFG++ EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIST 402
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +MAPE T+++DV+SFG++ EI +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQL-----ADGTI-IAVKQLSSKSRQGNRE-FLNEIAMISC 292
NN K +G G FG V + D + +AVK L S + +E ++E+ ++S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 293 L-QHPNLVKIHGCCVEGDQLLLVYEYMENNSL-------ACALFGR--------ENCELE 336
L QH N+V + G C G +L++ EY L A A+ G E + E
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 337 LDWPTRQKICL----GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 392
P + L +A+G+AFL ++ +HRD+ A NVLL KI DFGLA+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 393 DEGDKTHISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
D +I A + +MAPE T ++DV+S+GI+ EI S
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + T +AVK L S + + + + ++E+ M+ + +H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R LE + P Q
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI--- 400
+ARG+ +L + K +HRD+ A NVL+ D KI+DFGLA+ D HI
Sbjct: 139 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 191
Query: 401 --STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+T + +MAPE T+++DV+SFG++ EI +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 246 KKIGEGGFG-PVYKGQLADGTIIAVKQ-----LSSKSRQGNREFLNEIAMISCLQHPNLV 299
+KIGEG FG + DG +K+ +SSK R+ +R E+A+++ ++HPN+V
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR---EVAVLANMKHPNIV 86
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
+ E L +V +Y E L F R N + + + Q + + LA H
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDL----FKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWG 419
R KI+HRDIK+ N+ L +D ++ DFG+A++ ++ GT Y++PE
Sbjct: 143 DR-KILHRDIKSQNIFLTKDGTVQLGDFGIARV-LNSTVELARACIGTPYYLSPEICENK 200
Query: 420 YLTYKADVYSFGIVALEIVSGKN 442
K+D+++ G V E+ + K+
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKH 223
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNL 298
+++D +++G G FG V++ + A G A K + + EI +S L+HP L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGREN--CELELDWPTRQKICLGIARGLAFL 356
V +H + ++++++YE+M L + N E E RQ + +GL +
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ-----VCKGLCHM 165
Query: 357 HEESRFKIVHRDIKATNVLL--DRDLNPKISDFGL-AKLDEGDKTHISTRIAGTIGYMAP 413
HE + VH D+K N++ R K+ DFGL A LD ++T GT + AP
Sbjct: 166 HENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAP 219
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSG 440
E A + Y D++S G+++ ++SG
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLA--DGTI--IAVK--QLSSKSRQGNREFLN 285
L+ + N K +GEG FG V +G L DGT +AVK +L + S++ EFL+
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 286 EIAMISCLQHPNLVKIHGCCVEGD-----QLLLVYEYMENNSLAC-ALFGR-ENCELELD 338
E A + HPN++++ G C+E + +++ +M+ L L+ R E +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 339 WPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
T K + IA G+ +L S +HRD+ A N +L D+ ++DFGL+K
Sbjct: 146 LQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 399 HISTRIAGT-IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALE 451
+ RIA + ++A E T K+DV++FG+ EI + M+ P ++
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQ 254
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 130/293 (44%), Gaps = 40/293 (13%)
Query: 240 NNFDSAKKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MIS 291
+ + K +G G FG V + + A +AVK L + +R ++E+ +I
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 292 CLQHPNLVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENCELELDWPT--------- 341
H N+V + G C + G L+++ E+ + +L+ L + N + P
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 342 RQKIC--LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH 399
IC +A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D
Sbjct: 148 EHLICYSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 400 ISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLL 458
+ A + +MAPE T ++DV+SFG++ EI S S P ++ D
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID----- 257
Query: 459 DWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ C ++G + D Y E M + L C + PS RPT SE+
Sbjct: 258 EEFCRRLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF Y+ D + ++ KS + +E ++ EIA+ L +P++V HG
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I +G+ +LH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN-- 161
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ D++ KI DFGLA E D + GT Y+APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEVLCKKGH 219
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ D++S G + ++ GK F+ +CL + +++ +E +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKP--------PFETSCLKETYIRIKK--------NEYSVPR 263
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L +A P+LRP+++E+
Sbjct: 264 HINPVASALIRRML---HADPTLRPSVAEL 290
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF ++ AD + ++ KS + RE ++ EI++ L H ++V HG
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I G +LH R
Sbjct: 85 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-----IVLGCQYLH---R 135
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ DL KI DFGLA E D T + GT Y+APE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH 194
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ DV+S G + ++ GK F+ +CL + +++ +E K
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKP--------PFETSCLKETYLRIKK--------NEYSIPK 238
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L P+ RPT++E+
Sbjct: 239 HINPVAASLIQKML---QTDPTARPTINEL 265
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 41/288 (14%)
Query: 246 KKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHPN 297
K +G G FG V + + A +AVK L + +R ++E+ +I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 298 LVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-IC 346
+V + G C + G L+++ E+ + +L+ L + N +L D+ T + IC
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 347 --LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++
Sbjct: 144 YSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 405 AG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCR 253
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 254 RLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 41/288 (14%)
Query: 246 KKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHPN 297
K +G G FG V + + A +AVK L + +R ++E+ +I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 298 LVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-IC 346
+V + G C + G L+++ E+ + +L+ L + N +L D+ T + IC
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 347 --LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++
Sbjct: 144 YSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 405 AG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCR 253
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 254 RLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF ++ AD + ++ KS + RE ++ EI++ L H ++V HG
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I G +LH R
Sbjct: 85 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-----IVLGCQYLH---R 135
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ DL KI DFGLA E D T + GT Y+APE
Sbjct: 136 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH 194
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ DV+S G + ++ GK F+ +CL + +++ +E K
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKP--------PFETSCLKETYLRIKK--------NEYSIPK 238
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L P+ RPT++E+
Sbjct: 239 HINPVAASLIQKML---QTDPTARPTINEL 265
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + +I+DFGLA+ ++ D +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 39/287 (13%)
Query: 245 AKKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHP 296
K +G G FG V + + A +AVK L + +R ++E+ +I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 297 NLVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC-------ELELDWPTRQKI--- 345
N+V + G C + G L+++ E+ + +L+ L + N +L D+ T + +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIA 405
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D + A
Sbjct: 154 SFQVAKGMEFL--ASR-KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 406 G-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHL 464
+ +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCRR 263
Query: 465 QQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 264 LKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF ++ AD + ++ KS + RE ++ EI++ L H ++V HG
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I G +LH R
Sbjct: 89 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-----IVLGCQYLH---R 139
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ DL KI DFGLA E D T + GT Y+APE
Sbjct: 140 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH 198
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ DV+S G + ++ GK F+ +CL + +++ +E K
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKP--------PFETSCLKETYLRIKK--------NEYSIPK 242
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L P+ RPT++E+
Sbjct: 243 HINPVAASLIQKML---QTDPTARPTINEL 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNREFLN-EIAMISCL 293
++D + +GEG G V QLA + +AVK + K E + EI + L
Sbjct: 5 VEDWDLVQTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
H N+VK +G EG+ L EY L F R ++ + P Q+ + G+
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIAGTIGYMA 412
+LH I HRDIK N+LLD N KISDFGLA + ++ + ++ GT+ Y+A
Sbjct: 118 VYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSGK 441
PE + DV+S GIV +++G+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF Y+ D + ++ KS + +E ++ EIA+ L +P++V HG
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I +G+ +LH
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN-- 161
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ D++ KI DFGLA E D + GT Y+APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGH 219
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ D++S G + ++ GK F+ +CL + +++ +E +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKP--------PFETSCLKETYIRIKK--------NEYSVPR 263
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L +A P+LRP+++E+
Sbjct: 264 HINPVASALIRRML---HADPTLRPSVAEL 290
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 245 AKKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHP 296
K +G G FG V + + A +AVK L + +R ++E+ +I H
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 297 NLVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-I 345
N+V + G C + G L+++ E+ + +L+ L + N +L D+ T + I
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 346 C--LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR 403
C +A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++
Sbjct: 189 CYSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 404 IAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWAC 462
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFC 298
Query: 463 HLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 299 RRLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 338
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNL 298
+++D +++G G FG V++ + A G A K + + EI +S L+HP L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGREN--CELELDWPTRQKICLGIARGLAFL 356
V +H + ++++++YE+M L + N E E RQ + +GL +
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ-----VCKGLCHM 271
Query: 357 HEESRFKIVHRDIKATNVLL--DRDLNPKISDFGL-AKLDEGDKTHISTRIAGTIGYMAP 413
HE + VH D+K N++ R K+ DFGL A LD ++T GT + AP
Sbjct: 272 HENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAP 325
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSG 440
E A + Y D++S G+++ ++SG
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +
Sbjct: 147 VSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 245 AKKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHP 296
K +G G FG V + + A +AVK L + +R ++E+ +I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 297 NLVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-I 345
N+V + G C + G L+++ E+ + +L+ L + N +L D+ T + I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 346 C--LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR 403
C +A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++
Sbjct: 154 CYSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 404 IAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWAC 462
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFC 263
Query: 463 HLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 264 RRLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 303
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIST 402
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +T
Sbjct: 207 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +MAPE T+++DV+SFG++ EI +
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 128/270 (47%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF Y+ D + ++ KS + +E ++ EIA+ L +P++V HG
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I +G+ +LH
Sbjct: 94 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN-- 145
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ D++ KI DFGLA E D + GT Y+APE
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKKGH 203
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ D++S G + ++ GK F+ +CL + +++ +E +
Sbjct: 204 SFEVDIWSLGCILYTLLVGKP--------PFETSCLKETYIRIKK--------NEYSVPR 247
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L +A P+LRP+++E+
Sbjct: 248 HINPVASALIRRML---HADPTLRPSVAEL 274
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 41/288 (14%)
Query: 246 KKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHPN 297
K +G G FG V + + A +AVK L + +R ++E+ +I H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 298 LVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-IC 346
+V + G C + G L+++ E+ + +L+ L + N +L D+ T + IC
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 347 --LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++
Sbjct: 153 YSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 405 AG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCR 262
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 263 RLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE---LDWPTRQK 344
+++ ++V++ G +G L++ E M L L L P+ K
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 345 ICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHI 400
+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 401 STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE---LDWPTRQK 344
+++ ++V++ G +G L++ E M L L L P+ K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 345 ICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHI 400
+ IA G+A+L+ K VHRD+ A N ++ D KI DFG+ + + E D
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 401 STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 21/220 (9%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNR-EFLNEI 287
+ A ++++G+G FG VY+G +A G + +A+K ++ + R EFLNE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELE----LDWPTRQ 343
+++ ++V++ G +G L++ E M L L E+E L P+
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPEMENNPVLAPPSLS 125
Query: 344 KICL---GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
K+ IA G+A+L+ K VHRD+ A N + D KI DFG+ + + E D
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 400 ISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ + +M+PE G T +DV+SFG+V EI +
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +
Sbjct: 152 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ EY +L L R +E + P Q
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +
Sbjct: 149 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 246 KKIGEGGFGPVY---KGQLADGT--IIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLV 299
+ +GEG FG V DGT ++AVK L + +R + EI ++ L H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 300 KIHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLH 357
K GCC + + L LV EY+ SL L R + L Q+IC G+A+LH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQIC----EGMAYLH 134
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEY 415
+ +HR++ A NVLLD D KI DFGLAK + R G + + APE
Sbjct: 135 SQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
Y +DV+SFG+ E+++ ++ S +P +F
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKF 227
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 246 KKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHPN 297
K +G G FG V + + A +AVK L + +R ++E+ +I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 298 LVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-IC 346
+V + G C + G L+++ E+ + +L+ L + N +L D+ T + IC
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 347 --LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D +
Sbjct: 144 YSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 405 AG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCR 253
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 254 RLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 247 KIGEGGFGPVYKGQ---LAD--GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKI 301
++G+G FG V + L D G ++AVKQL R+F EI ++ L +VK
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 302 HGCCVEG--DQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
G +L LV EY+ + L L + LD I +G+ +L
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYAL 417
+ VHRD+ A N+L++ + + KI+DFGLAKL DK R G I + APE
Sbjct: 131 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 418 WGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
+ ++DV+SFG+V E+ + + S +P+ EF
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEF 221
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 246 KKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHPN 297
K +G G FG V + + A +AVK L + +R ++E+ +I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 298 LVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-IC 346
+V + G C + G L+++ E+ + +L+ L + N +L D+ T + IC
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 347 --LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D +
Sbjct: 144 YSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 405 AG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCR 253
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 254 RLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 45/294 (15%)
Query: 240 NNFDSAKKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MIS 291
+ + K +G G FG V + + A +AVK L + +R ++E+ +I
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 292 CLQHPNLVKIHGCCVE-GDQLLLVYEYMENNSLACALFGREN-----CELELDWPTRQKI 345
H N+V + G C + G L+++ E+ + +L+ L + N +L D+ T + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 346 C---LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST 402
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++
Sbjct: 147 IXYSFQVAKGMEFL--ASR-KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 403 RIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWA 461
A + +MAPE T ++DV+SFG++ EI S S P ++ D
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-------- 253
Query: 462 CHLQQDGKLVELVDERL--GSKYKKEE--AERMIKVSLLCTNASPSLRPTMSEV 511
E RL G++ + + M + L C + PS RPT SE+
Sbjct: 254 ----------EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 297
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 246 KKIGEGGFGPVY---KGQLADGT--IIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLV 299
+ +GEG FG V DGT ++AVK L + +R + EI ++ L H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 300 KIHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLH 357
K GCC + + L LV EY+ SL L R + L Q+IC G+A+LH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQIC----EGMAYLH 134
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEY 415
+ +HR++ A NVLLD D KI DFGLAK + R G + + APE
Sbjct: 135 AQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
Y +DV+SFG+ E+++ ++ S +P +F
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKF 227
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 246 KKIGEGGFGPVYKG-QLADGTII----AVKQLSSKS-RQGNREFLNEIAMISCLQHPNLV 299
K +G G FG V+KG + +G I +K + KS RQ + + + I L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKICLGIARGLAFL 356
++ G C G L LV +Y+ SL + G +L L+W + IA+G+ +L
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 131
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPEY 415
E +VHR++ A NVLL +++DFG+A L DK + + I +MA E
Sbjct: 132 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
+G T+++DV+S+G+ E+++
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 15/209 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSK--SRQGNREFLN-EIAMIS 291
K + +F + +G G FG V+ + +G A+K L + R E N E M+S
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR 351
+ HP ++++ G + Q+ ++ +Y+E L L + + ++CL
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA--- 118
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYM 411
L +LH + I++RD+K N+LLD++ + KI+DFG AK ++ + GT Y+
Sbjct: 119 -LEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY----VPDVTYXLCGTPDYI 170
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSG 440
APE D +SFGI+ E+++G
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 246 KKIGEGGFGPVYKG-QLADGTII----AVKQLSSKS-RQGNREFLNEIAMISCLQHPNLV 299
K +G G FG V+KG + +G I +K + KS RQ + + + I L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKICLGIARGLAFL 356
++ G C G L LV +Y+ SL + G +L L+W + IA+G+ +L
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 149
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPEY 415
E +VHR++ A NVLL +++DFG+A L DK + + I +MA E
Sbjct: 150 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
+G T+++DV+S+G+ E+++
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 246 KKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHPN 297
K +G G FG V + + A +AVK L + +R ++E+ +I H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 298 LVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-IC 346
+V + G C + G L+++ E+ + +L+ L + N +L D+ T + IC
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 347 --LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D +
Sbjct: 153 YSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 405 AG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCR 262
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 263 RLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 245 AKKIGEGGFGPVYKGQL-ADGTIIAVKQL-SSKSRQGNREFLNEIAMISCLQHPNLVKIH 302
++IG G FG V+ G+L AD T++AVK + +FL E ++ HPN+V++
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G C + + +V E ++ E L + T ++ A G+ +L +
Sbjct: 179 GVCTQKQPIYIVMELVQGGDF-LTFLRTEGARLRVK--TLLQMVGDAAAGMEYLESKC-- 233
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST--RIAGTIGYMAPEYALWGY 420
+HRD+ A N L+ KISDFG+++ +E D + ++ + + APE +G
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 421 LTYKADVYSFGIVALEIVS 439
+ ++DV+SFGI+ E S
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AV+ QL+S S Q + E+ ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC-ELELDWPTRQKICLGIARGL 353
HPN+VK+ L LV EY + L E E RQ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAV 126
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-------KLDEGDKTHISTRIAG 406
+ H++ IVHRD+KA N+LLD D+N KI+DFG + KLDE G
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE---------FCG 174
Query: 407 TIGYMAPE-YALWGYLTYKADVYSFGIVALEIVSG 440
+ Y APE + Y + DV+S G++ +VSG
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 246 KKIGEGGFGPV----YKGQLAD-GTIIAVKQLSSKSRQGNR--EFLNEIAMISCLQHPNL 298
+ +GEG FG V Y + + G +AVK L +S GN + EI ++ L H N+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENI 85
Query: 299 VKIHGCCVE--GDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
VK G C E G+ + L+ E++ + SL L +N +++ + K + I +G+ +L
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYL 142
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR--IAGTIGYMAPE 414
SR + VHRD+ A NVL++ + KI DFGL K E DK + + + + APE
Sbjct: 143 G--SR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ +DV+SFG+ E+++
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 41/288 (14%)
Query: 246 KKIGEGGFGPVYKG------QLADGTIIAVKQLSSKSRQG-NREFLNEIA-MISCLQHPN 297
K +G G FG V + + A +AVK L + +R ++E+ +I H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 298 LVKIHGCCVE-GDQLLLVYEYMENNSLACALFGRENC---------ELELDWPTRQK-IC 346
+V + G C + G L+++ E+ + +L+ L + N +L D+ T + IC
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 347 --LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D +
Sbjct: 153 YSFQVAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 405 AG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACH 463
A + +MAPE T ++DV+SFG++ EI S S P ++ D + C
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCR 262
Query: 464 LQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
++G + D Y E M + L C + PS RPT SE+
Sbjct: 263 RLKEGTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AVK QL+S S Q + E+ ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC-ELELDWPTRQKICLGIARGL 353
HPN+VK+ L LV EY + L E E RQ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAV 126
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMA 412
+ H++ IVHRD+KA N+LLD D+N KI+DFG + + G+K G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 180
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSG 440
PE + Y + DV+S G++ +VSG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 246 KKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-QH 295
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------- 343
N++ + G C + L ++ Y +L L R +E + P Q
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIST 402
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +MAPE T+++DV+SFG++ EI +
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSKSRQGNREFLNEIAMISCL 293
N+ IGEG FG V K ++ D I +K+ +SK +R+F E+ ++ L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKL 82
Query: 294 -QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELD------------WP 340
HPN++ + G C L L EY + +L F R++ LE D
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD--FLRKSRVLETDPAFAIANSTASTLS 140
Query: 341 TRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
++Q + +ARG+ +L S+ + +HRD+ A N+L+ + KI+DFGL++ G +
Sbjct: 141 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEV 194
Query: 399 HISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
++ + + +MA E + T +DV+S+G++ EIVS
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 246 KKIGEGGFGPV----YKGQLAD-GTIIAVKQLSSKSRQGNR--EFLNEIAMISCLQHPNL 298
+ +GEG FG V Y + + G +AVK L +S GN + EI ++ L H N+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENI 73
Query: 299 VKIHGCCVE--GDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
VK G C E G+ + L+ E++ + SL L +N +++ + K + I +G+ +L
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYL 130
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR--IAGTIGYMAPE 414
+ VHRD+ A NVL++ + KI DFGL K E DK + + + + APE
Sbjct: 131 GSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ +DV+SFG+ E+++
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AVK QL+S S Q + E+ ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC-ELELDWPTRQKICLGIARGL 353
HPN+VK+ L LV EY + L E E RQ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAV 126
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMA 412
+ H++ IVHRD+KA N+LLD D+N KI+DFG + + G+K G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 180
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSG 440
PE + Y + DV+S G++ +VSG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 16/212 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPVY---KGQLAD-GTIIAVKQLSS---KSRQGNREFLNEIA 288
KA ++F+ K +G+G FG V+ K D G + A+K L K R R + E
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERD 82
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
+++ + HP +VK+H +L L+ +++ L F R + E+ +
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE 138
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTI 408
+A GL LH I++RD+K N+LLD + + K++DFGL+K + D + GT+
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTV 194
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
YMAPE ++ AD +S+G++ E+++G
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSKSRQGNREFLNEIAMISCL 293
N+ IGEG FG V K ++ D I +K+ +SK +R+F E+ ++ L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKL 72
Query: 294 -QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELD------------WP 340
HPN++ + G C L L EY + +L F R++ LE D
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD--FLRKSRVLETDPAFAIANSTASTLS 130
Query: 341 TRQKICLG--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
++Q + +ARG+ +L S+ + +HRD+ A N+L+ + KI+DFGL++ G +
Sbjct: 131 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEV 184
Query: 399 HISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
++ + + +MA E + T +DV+S+G++ EIVS
Sbjct: 185 YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF ++ AD + ++ KS + RE ++ EI++ L H ++V HG
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I G +LH R
Sbjct: 83 FFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQ-----IVLGCQYLH---R 133
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ DL KI DFGLA E D + GT Y+APE
Sbjct: 134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGH 192
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ DV+S G + ++ GK F+ +CL + +++ +E K
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKP--------PFETSCLKETYLRIKK--------NEYSIPK 236
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L P+ RPT++E+
Sbjct: 237 HINPVAASLIQKML---QTDPTARPTINEL 263
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMIS- 291
QIK +F+ K +G+G FG V+ + A+K L + + E M+
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV--ECTMVEK 69
Query: 292 -----CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
+HP L + + L V EY+ L ++ ++C + D
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCH-KFDLSRATFYA 125
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIA 405
I GL FLH + IV+RD+K N+LLD+D + KI+DFG+ K + GD +
Sbjct: 126 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFC 180
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKN 442
GT Y+APE L + D +SFG++ E++ G++
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGT-------IIAVKQLSSKSRQGNREFLNEIA 288
KA + F+ K +G+G FG V+ + G+ + +K+ + K R R +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
++ HP +VK+H +L L+ +++ L F R + E+ +
Sbjct: 80 LVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE 134
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTI 408
+A L LH I++RD+K N+LLD + + K++DFGL+K + D + GT+
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTV 190
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
YMAPE T AD +SFG++ E+++G
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF ++ AD + ++ KS + RE ++ EI++ L H ++V HG
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I G +LH R
Sbjct: 107 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-----IVLGCQYLH---R 157
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ DL KI DFGLA E D + GT Y+APE
Sbjct: 158 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGH 216
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ DV+S G + ++ GK F+ +CL + +++ +E K
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKP--------PFETSCLKETYLRIKK--------NEYSIPK 260
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L P+ RPT++E+
Sbjct: 261 HINPVAASLIQKML---QTDPTARPTINEL 287
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGT-------IIAVKQLSSKSRQGNREFLNEIA 288
KA + F+ K +G+G FG V+ + G+ + +K+ + K R R +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
++ HP +VK+H +L L+ +++ L F R + E+ +
Sbjct: 80 LVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE 134
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTI 408
+A L LH I++RD+K N+LLD + + K++DFGL+K + D + GT+
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTV 190
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
YMAPE T AD +SFG++ E+++G
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 42/278 (15%)
Query: 244 SAKKIGEGGFGPVYKGQLADGTI----IAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNL 298
S + IG+G FG VY G+ D A+K LS + E FL E ++ L HPN+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 299 VKIHGCCVEGDQLL-LVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLA 354
+ + G + + L ++ YM + L + + PT + + L +ARG+
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN------PTVKDLISFGLQVARGME 138
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDE---GDKTHISTRIAGTIG 409
+L E+ K VHRD+ A N +LD K++DFGLA+ LD + H R+ +
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP--VK 193
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGK 469
+ A E T K+DV+SFG++ E+++ + Y FD T L L Q
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLPQ--- 249
Query: 470 LVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPT 507
+Y + + +V C A P++RPT
Sbjct: 250 ----------PEYCPDS---LYQVMQQCWEADPAVRPT 274
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS---RQGNREFLN-EIAMISCLQHPNLVKIHG 303
+G+GGF ++ AD + ++ KS + RE ++ EI++ L H ++V HG
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENC--ELELDWPTRQKICLGIARGLAFLHEESR 361
+ D + +V E SL L R E E + RQ I G +LH R
Sbjct: 109 FFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQ-----IVLGCQYLH---R 159
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+++HRD+K N+ L+ DL KI DFGLA E D + GT Y+APE
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGH 218
Query: 422 TYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERLGSK 481
+++ DV+S G + ++ GK F+ +CL + +++ +E K
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKP--------PFETSCLKETYLRIKK--------NEYSIPK 262
Query: 482 YKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ A +I+ L P+ RPT++E+
Sbjct: 263 HINPVAASLIQKML---QTDPTARPTINEL 289
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGT-------IIAVKQLSSKSRQGNREFLNEIA 288
KA + F+ K +G+G FG V+ + G+ + +K+ + K R R +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
++ HP +VK+H +L L+ +++ L F R + E+ +
Sbjct: 81 LVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE 135
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTI 408
+A L LH I++RD+K N+LLD + + K++DFGL+K + D + GT+
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTV 191
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
YMAPE T AD +SFG++ E+++G
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 245 AKKIGEGGFGPVY--------KGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCL-Q 294
K +GEG FG V K + + +AVK L + + + + ++E+ M+ + +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDW-----PTRQ------ 343
H N++ + G C + L ++ Y +L L R +E + P Q
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 344 -KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHIS 401
+ARG+ +L + K +HRD+ A NVL+ + KI+DFGLA+ ++ D +
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 402 TRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
T + +MAPE T+++DV+SFG++ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 245 AKKIGEGGFGPVYKGQL-ADGTIIAVKQL-SSKSRQGNREFLNEIAMISCLQHPNLVKIH 302
++IG G FG V+ G+L AD T++AVK + +FL E ++ HPN+V++
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G C + + +V E ++ E L + T ++ A G+ +L +
Sbjct: 179 GVCTQKQPIYIVMELVQGGDF-LTFLRTEGARLRVK--TLLQMVGDAAAGMEYLESKC-- 233
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST--RIAGTIGYMAPEYALWGY 420
+HRD+ A N L+ KISDFG+++ +E D ++ + + APE +G
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 421 LTYKADVYSFGIVALEIVS 439
+ ++DV+SFGI+ E S
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNRE-FLNEIAMIS 291
N K +G G FG V + A G I +AVK L + RE ++E+ ++S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 292 CL-QHPNLVKIHGCCVEGDQLLLVYEYM-----------ENNSLACALFG---RENCELE 336
L H N+V + G C G L++ EY + +S C+ E+ EL
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 337 LDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD 396
LD +A+G+AFL ++ +HRD+ A N+LL KI DFGLA+ + D
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 397 KTHISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEFDC 454
++ A + +MAPE T+++DV+S+GI E+ S G + P
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----- 276
Query: 455 TCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
D K +++ E + M + C +A P RPT ++
Sbjct: 277 ------------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AV+ QL+S S Q + E+ ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC-ELELDWPTRQKICLGIARGL 353
HPN+VK+ L LV EY + L E E RQ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAV 126
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMA 412
+ H++ IVHRD+KA N+LLD D+N KI+DFG + + G+K G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 180
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSG 440
PE + Y + DV+S G++ +VSG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AVK QL+S S Q + E+ ++ L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC-ELELDWPTRQKICLGIARGL 353
HPN+VK+ L LV EY + L E E RQ I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAV 126
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMA 412
+ H++ IVHRD+KA N+LLD D+N KI+DFG + + G+K G Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAA 180
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSG 440
PE + Y + DV+S G++ +VSG
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVY------KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++ + + +G+G FG V GQ +I+ +Q+ K+ + L E+ ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLLKQ 82
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L HPN++K++ + LV E L + R+ E+D +I + G
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAA---RIIRQVLSG 138
Query: 353 LAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
+ ++H+ KIVHRD+K N+LL+ +D N +I DFGL+ E K + +I GT
Sbjct: 139 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI-GTAY 193
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L G K DV+S G++ ++SG
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNRE-FLNEIAMIS 291
N K +G G FG V + A G I +AVK L + RE ++E+ ++S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 81
Query: 292 CL-QHPNLVKIHGCCVEGDQLLLVYEYM-----------ENNSLACALFG---RENCELE 336
L H N+V + G C G L++ EY + +S C+ E+ EL
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 337 LDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD 396
LD +A+G+AFL ++ +HRD+ A N+LL KI DFGLA+ + D
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 397 KTHISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEFDC 454
++ A + +MAPE T+++DV+S+GI E+ S G + P
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----- 253
Query: 455 TCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
D K +++ E + M + C +A P RPT ++
Sbjct: 254 ------------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLS--SKSRQGNREFLNEIAMIS 291
+ + +++ IG G +G K + +DG I+ K+L S + + ++E+ ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 292 CLQHPNLVKIHGCCVE--GDQLLLVYEYMENNSLACALFG--RENCELELDWPTRQKICL 347
L+HPN+V+ + ++ L +V EY E LA + +E L+ ++ R L
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A + ++HRD+K NV LD N K+ DFGLA++ D T + GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKTFVGT 179
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
YM+PE K+D++S G + E+ +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVY------KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++ + + +G+G FG V GQ +I+ +Q+ K+ + L E+ ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLLKQ 105
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L HPN++K++ + LV E L + R+ E+D +I + G
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAA---RIIRQVLSG 161
Query: 353 LAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
+ ++H+ KIVHRD+K N+LL+ +D N +I DFGL+ E K + +I GT
Sbjct: 162 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 216
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L G K DV+S G++ ++SG
Sbjct: 217 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNRE-FLNEIAMIS 291
N K +G G FG V + A G I +AVK L + RE ++E+ ++S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 99
Query: 292 CL-QHPNLVKIHGCCVEGDQLLLVYEYM-----------ENNSLACALFG---RENCELE 336
L H N+V + G C G L++ EY + +S C+ E+ EL
Sbjct: 100 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 337 LDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD 396
LD +A+G+AFL ++ +HRD+ A N+LL KI DFGLA+ + D
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 397 KTHISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEFDC 454
++ A + +MAPE T+++DV+S+GI E+ S G + P
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----- 271
Query: 455 TCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
D K +++ E + M + C +A P RPT ++
Sbjct: 272 ------------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVY------KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++ + + +G+G FG V GQ +I+ +Q+ K+ + L E+ ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLLKQ 106
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L HPN++K++ + LV E L + R+ E+D +I + G
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAA---RIIRQVLSG 162
Query: 353 LAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
+ ++H+ KIVHRD+K N+LL+ +D N +I DFGL+ E K + +I GT
Sbjct: 163 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 217
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L G K DV+S G++ ++SG
Sbjct: 218 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNRE-FLNEIAMIS 291
N K +G G FG V + A G I +AVK L + RE ++E+ ++S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 292 CL-QHPNLVKIHGCCVEGDQLLLVYEYM-----------ENNSLACALFG---RENCELE 336
L H N+V + G C G L++ EY + +S C+ E+ EL
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 337 LDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD 396
LD +A+G+AFL ++ +HRD+ A N+LL KI DFGLA+ + D
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 397 KTHISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEFDC 454
++ A + +MAPE T+++DV+S+GI E+ S G + P
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----- 276
Query: 455 TCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
D K +++ E + M + C +A P RPT ++
Sbjct: 277 ------------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVY------KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++ + + +G+G FG V GQ +I+ +Q+ K+ L E+ ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT--DKESLLREVQLLKQ 88
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L HPN++K++ + LV E L + R+ E+D +I + G
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVD---AARIIRQVLSG 144
Query: 353 LAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
+ ++H+ KIVHRD+K N+LL+ +D N +I DFGL+ E K + +I GT
Sbjct: 145 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI-GTAY 199
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L G K DV+S G++ ++SG
Sbjct: 200 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 237 AATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKS---RQGNREFLNEI-AMIS 291
A ++F K IG+G FG V + A+ AVK L K+ ++ + ++E ++
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR 351
++HP LV +H D+L V +Y+ L L RE C LE P + IA
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL-QRERCFLE---PRARFYAAEIAS 150
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYM 411
L +LH IV+RD+K N+LLD + ++DFGL K + + ST GT Y+
Sbjct: 151 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYL 206
Query: 412 APEYALWGYLTYKADVYSFGIVALEIVSG 440
APE D + G V E++ G
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLS--SKSRQGNREFLNEIAMIS 291
+ + +++ IG G +G K + +DG I+ K+L S + + ++E+ ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 292 CLQHPNLVKIHGCCVE--GDQLLLVYEYMENNSLACALFG--RENCELELDWPTRQKICL 347
L+HPN+V+ + ++ L +V EY E LA + +E L+ ++ R L
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A + ++HRD+K NV LD N K+ DFGLA++ D T + GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGT 179
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
YM+PE K+D++S G + E+ +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 126/297 (42%), Gaps = 46/297 (15%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTI-------IAVKQLSSKSRQGNRE-FLNEIAMIS 291
N K +G G FG V + A G I +AVK L + RE ++E+ ++S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEAT-AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 97
Query: 292 CL-QHPNLVKIHGCCVEGDQLLLVYEYM-----------ENNSLACALFG---RENCELE 336
L H N+V + G C G L++ EY + +S C+ E+ EL
Sbjct: 98 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 337 LDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD 396
LD +A+G+AFL ++ +HRD+ A N+LL KI DFGLA+ + D
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 397 KTHISTRIAG-TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS-GKNNMSYAPALEFDC 454
++ A + +MAPE T+++DV+S+GI E+ S G + P
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----- 269
Query: 455 TCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
D K +++ E + M + C +A P RPT ++
Sbjct: 270 ------------DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AVK QL+S S Q + E+ ++ L
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLN 64
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRE-NCELELDWPTRQKICLGIARGL 353
HPN+VK+ L LV EY + L E E RQ I +
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ-----IVSAV 119
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMA 412
+ H++ IVHRD+KA N+LLD D+N KI+DFG + + G+K G+ Y A
Sbjct: 120 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAA 173
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSG 440
PE + Y + DV+S G++ +VSG
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 19/201 (9%)
Query: 248 IGEGGFGPV-----YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIH 302
+GEG FG V YK Q +QL KS R EI+ + L+HP+++K++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
+++V EY + + E E +Q IC + + H R
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIIC-----AIEYCH---RH 127
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWG--Y 420
KIVHRD+K N+LLD +LN KI+DFGL+ + D + T G+ Y APE + G Y
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNI-MTDGNFLKTS-CGSPNYAAPE-VINGKLY 184
Query: 421 LTYKADVYSFGIVALEIVSGK 441
+ DV+S GIV ++ G+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 40/234 (17%)
Query: 225 LQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQG-NREF 283
Q++ L ++KA G FG V+K QL + +AVK + +Q E+
Sbjct: 21 FQSMPLQLLEVKA------------RGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY 67
Query: 284 LNEIAMISCLQHPNLVKIHGCCVEGDQ----LLLVYEYMENNSLACALFGRENCELELDW 339
E+ + ++H N+++ G G L L+ + E SL+ F + N + W
Sbjct: 68 --EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSD--FLKANV---VSW 120
Query: 340 PTRQKICLGIARGLAFLHEE-------SRFKIVHRDIKATNVLLDRDLNPKISDFGLA-K 391
I +ARGLA+LHE+ + I HRDIK+ NVLL +L I+DFGLA K
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 392 LDEGDKTHISTRIAGTIGYMAPEYALWGYLTY------KADVYSFGIVALEIVS 439
+ G + GT YMAPE L G + + + D+Y+ G+V E+ S
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 32/214 (14%)
Query: 248 IGEGGFGPVYKGQLA------DGTIIAVKQLSSKSRQGNREFLNEIAMISCL-QHPNLVK 300
IGEG FG V K ++ D I +K+ +SK +R+F E+ ++ L HPN++
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKLGHHPNIIN 87
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELD------------WPTRQKICLG 348
+ G C L L EY + +L F R++ LE D ++Q +
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLD--FLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 349 --IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG 406
+ARG+ +L S+ + +HR++ A N+L+ + KI+DFGL++ G + ++ +
Sbjct: 146 ADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 407 -TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +MA E + T +DV+S+G++ EIVS
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMIS- 291
QIK +F K +G+G FG V+ + A+K L + + E M+
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV--ECTMVEK 68
Query: 292 -----CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
+HP L + + L V EY+ L ++ ++C + D
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCH-KFDLSRATFYA 124
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE-GDKTHISTRIA 405
I GL FLH + IV+RD+K N+LLD+D + KI+DFG+ K + GD +
Sbjct: 125 AEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFC 179
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKN 442
GT Y+APE L + D +SFG++ E++ G++
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 247 KIGEGGFGPVYKG--QLADGTI-IAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIH 302
++G G FG V +G ++ I +A+K L + + + E + E ++ L +P +V++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G C + + L+LV E L L G+ E+ ++ ++ G+ +L E++
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEEKN-- 130
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEYALWGY 420
VHRD+ A NVLL KISDFGL+K D ++ + R AG + + APE +
Sbjct: 131 -FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 421 LTYKADVYSFGIVALEIVS 439
+ ++DV+S+G+ E +S
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLAD--GTIIAVKQLSSKSRQGNREF--LNEIAMISCL 293
A ++ +IGEG +G V+K + G +A+K++ ++ + + E+A++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 294 Q---HPNLVKIHGCCV-----EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKI 345
+ HPN+V++ C +L LV+E+++ + + + E + T + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD---LTTYLDKVPEPGVPTETIKDM 125
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIA 405
+ RGL FLH ++VHRD+K N+L+ K++DFGLA++ T +
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVV 180
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T+ Y APE L D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLAD--GTIIAVKQLSSKSRQGNREF--LNEIAMISCL 293
A ++ +IGEG +G V+K + G +A+K++ ++ + + E+A++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 294 Q---HPNLVKIHGCCV-----EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKI 345
+ HPN+V++ C +L LV+E+++ + + + E + T + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD---LTTYLDKVPEPGVPTETIKDM 125
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIA 405
+ RGL FLH ++VHRD+K N+L+ K++DFGLA++ T +
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVV 180
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T+ Y APE L D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AVK QL+ S Q + E+ ++ L
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILN 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC-ELELDWPTRQKICLGIARGL 353
HPN+VK+ L LV EY + L E E RQ I +
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ-----IVSAV 127
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMA 412
+ H++ IVHRD+KA N+LLD D+N KI+DFG + + G+K G+ Y A
Sbjct: 128 QYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAA 181
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSG 440
PE + Y + DV+S G++ +VSG
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLAD--GTIIAVKQLSSKSRQGNREF--LNEIAMISCL 293
A ++ +IGEG +G V+K + G +A+K++ ++ + + E+A++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 294 Q---HPNLVKIHGCCV-----EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKI 345
+ HPN+V++ C +L LV+E+++ + + + E + T + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD---LTTYLDKVPEPGVPTETIKDM 125
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIA 405
+ RGL FLH ++VHRD+K N+L+ K++DFGLA++ T +
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVV 180
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T+ Y APE L D++S G + E+ K
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 242 FDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQHPNLV 299
F +K+G G FG V+ + + G +K ++ Q E + EI ++ L HPN++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
KI + + +V E E L + + L ++ + LA+ H +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 360 SRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEY 415
+VH+D+K N+L +D +P KI DFGLA+L + D+ ST AGT YMAPE
Sbjct: 144 H---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE- 196
Query: 416 ALWGYLTYKADVYSFGIVALEIVSG 440
+T+K D++S G+V +++G
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQL--SSKSRQGNREFLNEIAMISCLQHPN 297
++ KIGEG +G V+K + D G I+A+K+ S + L EI M+ L+HPN
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSL-ACALFGR---ENCELELDWPTRQKICLGIARGL 353
LV + +L LV+EY ++ L + R E+ + W T Q +
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAV-------- 115
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAP 413
F H+ + +HRD+K N+L+ + K+ DFG A+L G + +A T Y +P
Sbjct: 116 NFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSP 171
Query: 414 EYALWGYLTY--KADVYSFGIVALEIVSG 440
E L G Y DV++ G V E++SG
Sbjct: 172 E-LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLS--SKSRQGNREFLNEIAMIS 291
+ + +++ IG G +G K + +DG I+ K+L S + + ++E+ ++
Sbjct: 1 MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 292 CLQHPNLVKIHGCCVE--GDQLLLVYEYMENNSLACALFG--RENCELELDWPTRQKICL 347
L+HPN+V+ + ++ L +V EY E LA + +E L+ ++ R L
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A + ++HRD+K NV LD N K+ DFGLA++ D+ + GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGT 179
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
YM+PE K+D++S G + E+ +
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQL--SSKSRQGNREFLNEIAMISCLQ 294
+ +++ +GEG +G V K + D G I+A+K+ S + + + EI ++ L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL---ELDWPTRQKICLGIAR 351
H NLV + C + + LV+E++++ L ++ EL LD+ QK I
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTIL-------DDLELFPNGLDYQVVQKYLFQIIN 135
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYM 411
G+ F H + I+HRDIK N+L+ + K+ DFG A+ +A T Y
Sbjct: 136 GIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYR 191
Query: 412 APEYALWGYLTY--KADVYSFGIVALEIVSGK 441
APE L G + Y DV++ G + E+ G+
Sbjct: 192 APE-LLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +A+K QL+ S Q + E+ ++ L
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILN 69
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENC-ELELDWPTRQKICLGIARGL 353
HPN+VK+ L L+ EY + L E E RQ I +
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ-----IVSAV 124
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMA 412
+ H++ +IVHRD+KA N+LLD D+N KI+DFG + + G K G+ Y A
Sbjct: 125 QYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAA 178
Query: 413 PE-YALWGYLTYKADVYSFGIVALEIVSG 440
PE + Y + DV+S G++ +VSG
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 244 SAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSR--------------QGNREFLNEIAM 289
+K+G G +G V + +G ++ KS+ + + E NEI++
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGI 349
+ L HPN++K+ + LV E+ E L + R + D I I
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQI 155
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLLDRD---LNPKISDFGLAKLDEGDKTHISTRIAG 406
G+ +LH+ + IVHRDIK N+LL+ LN KI DFGL+ D + R+ G
Sbjct: 156 LSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-YKLRDRL-G 210
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
T Y+APE Y K DV+S G++ ++ G
Sbjct: 211 TAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +AVK QL+S S Q + E+ + L
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVLN 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF--GRENCELELDWPTRQKICLGIARG 352
HPN+VK+ L LV EY + L GR E E RQ I
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK-EKEARAKFRQ-----IVSA 125
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYM 411
+ + H++ IVHRD+KA N+LLD D N KI+DFG + + G+K G Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYA 179
Query: 412 APE-YALWGYLTYKADVYSFGIVALEIVSG 440
APE + Y + DV+S G++ +VSG
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 21/232 (9%)
Query: 216 ETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG------QLADGTIIAV 269
E+ F +L+ LK+ N + ++G G FG V +G + D I +
Sbjct: 316 ESPFSDPEELKDKKLFLKR----DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL 371
Query: 270 KQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFG 329
KQ + K+ E + E ++ L +P +V++ G C + + L+LV E L L G
Sbjct: 372 KQGTEKA--DTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG 428
Query: 330 RENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 389
+ E+ ++ ++ G+ +L E++ VHR++ A NVLL KISDFGL
Sbjct: 429 KRE---EIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGL 482
Query: 390 AKLDEGDKTHISTRIAG--TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+K D ++ + R AG + + APE + + ++DV+S+G+ E +S
Sbjct: 483 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 30/224 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQGNREFLNEIAM-- 289
++ +A N+ ++ ++G G G V+K + G +IAVKQ+ R GN+E I M
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR---RSGNKEENKRILMDL 74
Query: 290 -ISCLQH--PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKI- 345
+ H P +V+ G + + + E M CA E + + P ++I
Sbjct: 75 DVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGT----CA----EKLKKRMQGPIPERIL 126
Query: 346 ---CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST 402
+ I + L +L E + ++HRD+K +N+LLD K+ DFG++ DK
Sbjct: 127 GKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KD 182
Query: 403 RIAGTIGYMAPEYALWGYLT-----YKADVYSFGIVALEIVSGK 441
R AG YMAPE T +ADV+S GI +E+ +G+
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFL-NEIAMI 290
KQ + + +D +G G F V + ++A+K ++ K+ +G + NEIA++
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
++HPN+V + G L L+ + + L + + E D ++ +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERD---ASRLIFQVL 126
Query: 351 RGLAFLHEESRFKIVHRDIKATNVL---LDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+ +LH+ IVHRD+K N+L LD D ISDFGL+K++ D + + GT
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGT 181
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY+APE + D +S G++A ++ G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 17/212 (8%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLS----SKSRQG-NREFLNEIA 288
+K+ ++ +GEG F VYK + + I+A+K++ S+++ G NR L EI
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
++ L HPN++ + + LV+++ME + + ++N L L + L
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMETD---LEVIIKDN-SLVLTPSHIKAYMLM 120
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTI 408
+GL +LH+ I+HRD+K N+LLD + K++DFGLAK G T
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRAYXHQVVTR 176
Query: 409 GYMAPEYALWGYLTY--KADVYSFGIVALEIV 438
Y APE L+G Y D+++ G + E++
Sbjct: 177 WYRAPEL-LFGARMYGVGVDMWAVGCILAELL 207
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 247 KIGEGGFGPVYKGQ--LADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPNLVKIHG 303
K+GEG + VYKG+ L D ++A+K++ + +G + E++++ L+H N+V +H
Sbjct: 9 KLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFK 363
L LV+EY++ + L L ++C ++ + + RGLA+ H R K
Sbjct: 68 IIHTEKSLTLVFEYLDKD-LKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCH---RQK 120
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY 423
++HRD+K N+L++ K++DFGLA+ + T+ Y P+ L G Y
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPD-ILLGSTDY 178
Query: 424 --KADVYSFGIVALEIVSGK 441
+ D++ G + E+ +G+
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 242 FDSAKKIGEGGFGPVY----KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPN 297
+ KK+G G +G V K + I +++ +S S N + L E+A++ L HPN
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRK-TSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLH 357
++K++ + LV E + L + R E+D I + G+ +LH
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN-EVDAAV---IIKQVLSGVTYLH 153
Query: 358 EESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
+ IVHRD+K N+LL ++D KI DFGL+ + E K + R+ GT Y+APE
Sbjct: 154 ---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERL-GTAYYIAPE 208
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
Y K DV+S G++ +++G
Sbjct: 209 VLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVY------KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++ + + +G+G FG V GQ +I+ +Q+ K+ + L E+ ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLLKQ 82
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L HPN+ K++ + LV E L + R+ E+D +I + G
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAA---RIIRQVLSG 138
Query: 353 LAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
+ + H+ KIVHRD+K N+LL+ +D N +I DFGL+ E K GT
Sbjct: 139 ITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IGTAY 193
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L G K DV+S G++ ++SG
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVK-----QLSSKSRQGNREFLNEIAMISCLQ 294
N+ K IG+G F V + + G +A+K QL+ S Q + E+ ++ L
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILN 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF--GRENCELELDWPTRQKICLGIARG 352
HPN+VK+ L L+ EY + L GR E E RQ I
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFRQ-----IVSA 126
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYM 411
+ + H++ +IVHRD+KA N+LLD D+N KI+DFG + + G K G Y
Sbjct: 127 VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYA 180
Query: 412 APE-YALWGYLTYKADVYSFGIVALEIVSG 440
APE + Y + DV+S G++ +VSG
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V K Q G I+A K + + + R + + E+ ++ P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLH 357
+V +G ++ + E+M+ SL L + E+ K+ + + RGLA+L
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI----LGKVSIAVLRGLAYLR 131
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAPEY 415
E + +I+HRD+K +N+L++ K+ DFG++ +D ++ GT YMAPE
Sbjct: 132 E--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMAPER 184
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDC 454
+ + ++D++S G+ +E+ G+ + A E +
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEA 223
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKS--RQGNREFLNEIAMISC-LQHP 296
+F +G+G F VY+ + + G +A+K + K+ + G + + I C L+HP
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
++++++ + + + LV E N + L R E + + I G+ +L
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEA---RHFMHQIITGMLYL 128
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAPEY 415
H I+HRD+ +N+LL R++N KI+DFGLA +L + H + + GT Y++PE
Sbjct: 129 HSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 416 ALWGYLTYKADVYSFGIVALEIVSGK 441
A ++DV+S G + ++ G+
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVY---KGQLADGT--IIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLV 299
+ +GEG FG V DGT ++AVK L R + EI ++ L H ++V
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 300 KIHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLH 357
K GCC + + + LV EY+ SL L R L Q+IC G+A+LH
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQIC----EGMAYLH 129
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEY 415
+ +HR + A NVLLD D KI DFGLAK + R G + + APE
Sbjct: 130 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
Y +DV+SFG+ E+++
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 41/229 (17%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNL 298
+F+ + +G GGFG V++ + D A+K++ +R+ RE + E+ ++ L+HP +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALF------GRENCELELDW--------PTRQK 344
V+ +E + E ++ +S L+ +EN + DW +
Sbjct: 66 VRYFNAWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLK---DWMNGRCTIEERERS 118
Query: 345 ICL----GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEGDK 397
+CL IA + FLH + ++HRD+K +N+ D K+ DFGL DE ++
Sbjct: 119 VCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 398 THIS-----TRIAGTIG---YMAPEYALWGYLTYKADVYSFGIVALEIV 438
T ++ R G +G YM+PE ++K D++S G++ E++
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 116
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T ++GT
Sbjct: 117 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGT 170
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVY---KGQLADGT--IIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLV 299
+ +GEG FG V DGT ++AVK L R + EI ++ L H ++V
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 300 KIHGCCVEGDQ--LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLH 357
K GCC + + + LV EY+ SL L R L Q+IC G+A+LH
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQIC----EGMAYLH 128
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPEY 415
+ +HR + A NVLLD D KI DFGLAK + R G + + APE
Sbjct: 129 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
Y +DV+SFG+ E+++
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 118
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 172
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 118
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 172
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYL-ESKRF 512
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 513 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 120
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 174
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 120
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 174
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPA 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 115
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 116 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 169
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 120
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 121 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 174
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 20/216 (9%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFL-NEIAMI 290
KQ + + +D +G G F V + ++A+K ++ ++ +G + NEIA++
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ---KICL 347
++HPN+V + G L L+ + + LF R +E + T + ++
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGE----LFDR---IVEKGFYTERDASRLIF 123
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVL---LDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+ + +LH+ IVHRD+K N+L LD D ISDFGL+K++ D + +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTA 178
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT GY+APE + D +S G++A ++ G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFL-NEIAMI 290
KQ + + +D +G G F V + ++A+K ++ ++ +G + NEIA++
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
++HPN+V + G L L+ + + L + + E D ++ +
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK-GFYTERD---ASRLIFQVL 126
Query: 351 RGLAFLHEESRFKIVHRDIKATNVL---LDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+ +LH+ IVHRD+K N+L LD D ISDFGL+K++ D + + GT
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGT 181
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY+APE + D +S G++A ++ G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADG-TIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHP 296
++ +KIGEG +G V+K + + I+A+K+ L L EI ++ L+H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFL 356
N+V++H +L LV+E+ + + ++C +LD + + +GL F
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYF----DSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
H + ++HRD+K N+L++R+ K++DFGLA+ G + T+ Y P+
Sbjct: 118 HSRN---VLHRDLKPQNLLINRNGELKLADFGLARA-FGIPVRCYSAEVVTLWYRPPD-V 172
Query: 417 LWGYLTYKA--DVYSFGIVALEIVSG 440
L+G Y D++S G + E+ +
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 116
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 117 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 170
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 120
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + T + GT+ Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLP 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 18/236 (7%)
Query: 216 ETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVY---------KGQLADGTI 266
E + +L+T + T K NF+ K +G G +G V+ G+L +
Sbjct: 30 EQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV 89
Query: 267 IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACA 326
+ + K++ + Q P LV +H +L L+ +Y+ L
Sbjct: 90 LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTH 149
Query: 327 LFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISD 386
L RE T ++ + + + L + I++RDIK N+LLD + + ++D
Sbjct: 150 LSQRERF-------TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTD 202
Query: 387 FGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY--KADVYSFGIVALEIVSG 440
FGL+K D+T + GTI YMAP+ G + D +S G++ E+++G
Sbjct: 203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 120
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + T + GT+ Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLP 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 20/216 (9%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFL-NEIAMI 290
KQ + + +D +G G F V + ++A+K ++ ++ +G + NEIA++
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ---KICL 347
++HPN+V + G L L+ + + LF R +E + T + ++
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGE----LFDR---IVEKGFYTERDASRLIF 123
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVL---LDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+ + +LH+ IVHRD+K N+L LD D ISDFGL+K++ D + +
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTA 178
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT GY+APE + D +S G++A ++ G
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNL 298
++F+ +G+G FG V K + A D A+K++ + + L+E+ +++ L H +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYV 64
Query: 299 VKIHGCCVE-------------GDQLLLVYEYMENNSLACALFGRENCELELD--WPTRQ 343
V+ + +E L + EY EN +L L EN + D W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL-YDLIHSENLNQQRDEYW---- 119
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA----------KLD 393
++ I L+++H + I+HRD+K N+ +D N KI DFGLA KLD
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 394 E----GDKTHISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIV 438
G ++++ I GT Y+A E G+ K D+YS GI+ E++
Sbjct: 177 SQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 119
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + T + GT+ Y+
Sbjct: 120 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLP 173
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 124
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + T + GT+ Y+
Sbjct: 125 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLP 178
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFL-NEIAMI 290
KQ + F+ + +G G F V + A G + AVK + K+ +G + NEIA++
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
++H N+V + + L LV + + L F R +E + T + I
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGEL----FDRI---VEKGFYTEKDASTLIR 127
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+ L ++ R IVHRD+K N+L D + ISDFGL+K+ EG K + + GT
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EG-KGDVMSTACGT 185
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY+APE + D +S G++A ++ G
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 120
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + T + GT+ Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLP 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 127
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 181
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 132
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 133 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 186
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 127
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 181
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
+ S L+HPN+++++G + ++ L+ EY + L + D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITE 121
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTI 408
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 175
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
Y+ PE K D++S G++ E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 41/230 (17%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNL 298
++F+ +G+G FG V K + A D A+K++ + + L+E+ +++ L H +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYV 64
Query: 299 VKIHGCCVE-------------GDQLLLVYEYMENNSLACALFGRENCELELD--WPTRQ 343
V+ + +E L + EY EN +L L EN + D W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL-YDLIHSENLNQQRDEYW---- 119
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA----------KLD 393
++ I L+++H + I+HRD+K N+ +D N KI DFGLA KLD
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 394 E----GDKTHISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIV 438
G ++++ I GT Y+A E G+ K D+YS GI+ E++
Sbjct: 177 SQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYL-ESKRF 132
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E +++ I +MAPE + T
Sbjct: 133 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCLQH 295
+FD + +G+G FG VY + I+A+K L + + E+ + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARGLA 354
PN+++++G + ++ L+ EY ++ RE +L D +A L+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSRFDEQRTATYITELANALS 126
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
+ H + +++HRDIK N+LL + KI+DFG + + T + GT+ Y+ PE
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE 180
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
K D++S G++ E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 141
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + T + GT
Sbjct: 142 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGT 195
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 120
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + T + GT+ Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLP 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 19/210 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVY--KGQL--ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
++ + KK+G G +G V K +L A+ I +K+ S + + L+E+A++ L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++K++ + LV E L + R+ E+D K L G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS-EVDAAVIMKQVLS---GTT 118
Query: 355 FLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGL-AKLDEGDKTHISTRIAGTIGY 410
+LH + IVHRD+K N+LL+ RD KI DFGL A + G K + R+ GT Y
Sbjct: 119 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERL-GTAYY 172
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+APE Y K DV+S G++ ++ G
Sbjct: 173 IAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL-ESKRF 132
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 133 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVY--KGQL--ADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
++ + KK+G G +G V K +L A+ I +K+ S + + L+E+A++ L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++K++ + LV E L + R+ E+D K L G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS-EVDAAVIMKQVLS---GTT 135
Query: 355 FLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGL-AKLDEGDKTHISTRIAGTIGY 410
+LH+ + IVHRD+K N+LL+ RD KI DFGL A + G K + R+ GT Y
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERL-GTAYY 189
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+APE Y K DV+S G++ ++ G
Sbjct: 190 IAPEVLRKKY-DEKCDVWSCGVILYILLCG 218
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 251 GGFGPVYKGQLADGTIIAVKQLS---SKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVE 307
G FG V+K QL + +AVK +S Q RE + M +H NL++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIFSTPGM----KHENLLQFIAAEKR 80
Query: 308 GD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF- 362
G +L L+ + + SL L G + W + ++RGL++LHE+ +
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 363 -------KIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAPE 414
I HRD K+ NVLL DL ++DFGLA + + G + GT YMAPE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 415 YALWGYLTY------KADVYSFGIVALEIVS 439
L G + + + D+Y+ G+V E+VS
Sbjct: 196 -VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL-ESKRF 160
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 161 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYL-ESKRF 512
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 513 --VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 117
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + T + GT+ Y+
Sbjct: 118 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLP 171
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKS---RQGNREFLNEIAMI 290
I N+F + IG GGFG VY + AD G + A+K L K +QG LNE M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 291 SCLQH---PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
S + P +V + D+L + + M L L + E D +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM---RFYAA 299
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I GL +H +RF +V+RD+K N+LLD + +ISD GLA K H S GT
Sbjct: 300 EIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 408 IGYMAPEYALWGYLTY--KADVYSFGIVALEIVSG 440
GYMAPE G + Y AD +S G + +++ G
Sbjct: 354 HGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRG 387
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKS---RQGNREFLNEIAMI 290
I N+F + IG GGFG VY + AD G + A+K L K +QG LNE M+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 291 SCLQH---PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
S + P +V + D+L + + M L L + E D +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM---RFYAA 298
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I GL +H +RF +V+RD+K N+LLD + +ISD GLA K H S GT
Sbjct: 299 EIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 352
Query: 408 IGYMAPEYALWGYLTY--KADVYSFGIVALEIVSG 440
GYMAPE G + Y AD +S G + +++ G
Sbjct: 353 HGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRG 386
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL-ESKRF 134
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 135 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL-ESKRF 129
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 130 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL-ESKRF 137
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 138 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL-ESKRF 132
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 133 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYL-ESKRF 135
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ + K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 136 --VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 248 IGEGGFGPVYKGQLAD----GTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
IGEG FG V++G +A+K + + RE FL E + HP++VK+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G E + + ++ E L L R+ LD + ++ LA+L E RF
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYL-ESKRF 132
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI A NVL+ K+ DFGL++ E + +++ I +MAPE + T
Sbjct: 133 --VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 423 YKADVYSFGIVALEIV 438
+DV+ FG+ EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + + I+A+K L + + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 120
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + K++HRDIK N+LL KI+DFG + + + GT+ Y+
Sbjct: 121 LSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLP 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKS---RQGNREFLNEIAMI 290
I N+F + IG GGFG VY + AD G + A+K L K +QG LNE M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 291 SCLQH---PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
S + P +V + D+L + + M L L + E D +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM---RFYAA 299
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I GL +H +RF +V+RD+K N+LLD + +ISD GLA K H S GT
Sbjct: 300 EIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 408 IGYMAPEYALWGYLTY--KADVYSFGIVALEIVSG 440
GYMAPE G + Y AD +S G + +++ G
Sbjct: 354 HGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKS---RQGNREFLNEIAMI 290
I N+F + IG GGFG VY + AD G + A+K L K +QG LNE M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 291 SCLQH---PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
S + P +V + D+L + + M L L + E D +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM---RFYAA 299
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I GL +H +RF +V+RD+K N+LLD + +ISD GLA K H S GT
Sbjct: 300 EIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 408 IGYMAPEYALWGYLTY--KADVYSFGIVALEIVSG 440
GYMAPE G + Y AD +S G + +++ G
Sbjct: 354 HGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRG 387
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQ 294
+D+ +++G G F V K G I ++ S R +RE + E++++ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++ +H ++L+ E + L L +E+ E + I G+
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE----EATEFLKQILNGVY 128
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL-NP--KISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH +I H D+K N+ LLDR++ P KI DFGLA K+D G++ I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 118
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI++FG + + T + GT
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGT 172
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 118
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + + GT
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGT 172
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISC 292
++++ +++G G F V K G+ I ++LSS R +RE + E+ ++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
++HPN++ +H ++L+ E + L L +E+ L D T + I G
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT--QFLKQILDG 120
Query: 353 LAFLHEESRFKIVHRDIKATNV-LLDRDL-NPKIS--DFGLA-KLDEGDKTHISTRIAGT 407
+ +LH + +I H D+K N+ LLD+++ NP+I DFG+A K++ G++ I GT
Sbjct: 121 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 174
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 117
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI++FG + + T + GT
Sbjct: 118 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGT 171
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 247 KIGEGGFGPVYKGQLADGTI------IAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+IG G F VYKG + T+ + ++L+ RQ F E + LQHPN+V+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIVR 89
Query: 301 IHG---CCVEGDQ-LLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLA 354
+ V+G + ++LV E + +L L F ++ W C I +GL
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQ 143
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDL-NPKISDFGLAKLDEGDKTHISTRIAGTIGYMAP 413
FLH + I+HRD+K N+ + + KI D GLA L + + + GT + AP
Sbjct: 144 FLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAP 199
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGK 441
E Y DVY+FG LE + +
Sbjct: 200 EXYEEKY-DESVDVYAFGXCXLEXATSE 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 73 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 123
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 124 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 117
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + + GT
Sbjct: 118 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGT 171
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 93 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 144 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 93 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 143
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 144 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 83 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 133
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 134 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 71 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 121
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 122 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 91 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 141
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 142 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISC 292
++++ +++G G F V K G+ I ++LSS R +RE + E+ ++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
++HPN++ +H ++L+ E + L L +E+ L D T + I G
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT--QFLKQILDG 127
Query: 353 LAFLHEESRFKIVHRDIKATNV-LLDRDL-NPKIS--DFGLA-KLDEGDKTHISTRIAGT 407
+ +LH + +I H D+K N+ LLD+++ NP+I DFG+A K++ G++ I GT
Sbjct: 128 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 181
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADG-TIIAVKQ--LSSKSRQGNREFLNEIAMISCLQHPNL 298
++ +KIGEG +G V+K + + I+A+K+ L L EI ++ L+H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
V++H +L LV+E+ + + ++C +LD + + +GL F H
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYF----DSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW 418
+ ++HRD+K N+L++R+ K+++FGLA+ G + T+ Y P+ L+
Sbjct: 120 RN---VLHRDLKPQNLLINRNGELKLANFGLARA-FGIPVRCYSAEVVTLWYRPPD-VLF 174
Query: 419 GYLTYKA--DVYSFGIVALEIVSG 440
G Y D++S G + E+ +
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANA 198
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 116
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + + GT
Sbjct: 117 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGT 170
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 77 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 128 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 181
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 182 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 234
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDG 468
E + + ++D++S G+ +E+ G+ + A E + L + C ++ D
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE----LMFGCQVEGDA 285
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 435 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 485
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 486 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 119
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 172
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDG 468
E + + ++D++S G+ +E+ G+ + A E + L + C ++ D
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE----LMFGCQVEGDA 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 436 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 486
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + + G + + APE
Sbjct: 487 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 120
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + + GT+ Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLP 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 146
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 147 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 199
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDG 468
E + + ++D++S G+ +E+ G+ + A E + L + C ++ D
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE----LMFGCQVEGDA 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K N+FD K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTE----ERARFYGAEIV 115
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L +LH +V+RDIK N++LD+D + KI+DFGL K D + T GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+APE D + G+V E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
+ S L+HPN+++++G + ++ L+ EY + L + D
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITE 121
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTI 408
+A L++ H + +++HRDIK N+LL KI+DFG + + + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGTL 175
Query: 409 GYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
Y+ PE K D++S G++ E + GK
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K N+FD K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTE----ERARFYGAEIV 118
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L +LH +V+RDIK N++LD+D + KI+DFGL K D + T GT Y
Sbjct: 119 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 174
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+APE D + G+V E++ G+
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 119
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 172
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDG 468
E + + ++D++S G+ +E+ G+ + A E + L + C ++ D
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE----LMFGCQVEGDA 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K N+FD K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTE----ERARFYGAEIV 115
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L +LH +V+RDIK N++LD+D + KI+DFGL K D + T GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+APE D + G+V E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 120
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + + GT+ Y+
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLP 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 123
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + + GT+ Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLP 177
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 18/200 (9%)
Query: 248 IGEGGFGPVYKGQ----LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
+G+G FG V K + + + + + S+K++ + L E+ ++ L HPN++K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-ILREVELLKKLDHPNIMKLFE 88
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFK 363
+ +V E L + R+ E D +I + G+ ++H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFS-EHDAA---RIIKQVFSGITYMH---KHN 141
Query: 364 IVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
IVHRD+K N+LL ++D + KI DFGL+ + + T + RI GT Y+APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 421 LTYKADVYSFGIVALEIVSG 440
K DV+S G++ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 119
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 172
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDG 468
E + + ++D++S G+ +E+ G+ + A E + L + C ++ D
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE----LMFGCQVEGDA 223
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 23/235 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 119
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 172
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDG 468
E + + ++D++S G+ +E+ G+ + A E + L + C ++ D
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE----LMFGCQVEGDA 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 248 IGEGGFGPVYKG----QLADGTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
+GEG FG VY+G + +AVK N+E F++E ++ L HP++VK+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G +E + ++ E L L +N L T L I + +A+L
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLES---I 132
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI N+L+ K+ DFGL++ E + + ++ I +M+PE + T
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 423 YKADVYSFGIVALEIVS 439
+DV+ F + EI+S
Sbjct: 193 TASDVWMFAVCMWEILS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 248 IGEGGFGPVYKG----QLADGTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
+GEG FG VY+G + +AVK N+E F++E ++ L HP++VK+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G +E + ++ E L L +N L T L I + +A+L
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLES---I 128
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI N+L+ K+ DFGL++ E + + ++ I +M+PE + T
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 423 YKADVYSFGIVALEIVS 439
+DV+ F + EI+S
Sbjct: 189 TASDVWMFAVCMWEILS 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 37/226 (16%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
+F + IG GGFG V+K + DG ++++ + + RE + ++ L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 300 KIHGC-------CVEGDQLLLVYEYMENNS-------LACALFGRENCEL---------- 335
+GC D L +Y NS C E C+
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 336 ---ELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 392
+LD ++ I +G+ ++H + K++HRD+K +N+ L KI DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 393 DEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIV 438
+ D TR GT+ YM+PE + D+Y+ G++ E++
Sbjct: 186 LKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 19/208 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 122
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +DE ++ GT YM+P
Sbjct: 123 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE-----MANEFVGTRSYMSP 175
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGK 441
E + + ++D++S G+ +E+ G+
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 248 IGEGGFGPVYKG----QLADGTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNLVKIH 302
+GEG FG VY+G + +AVK N+E F++E ++ L HP++VK+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 303 GCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
G +E + ++ E L L +N L T L I + +A+L
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLES---I 144
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
VHRDI N+L+ K+ DFGL++ E + + ++ I +M+PE + T
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 423 YKADVYSFGIVALEIVS 439
+DV+ F + EI+S
Sbjct: 205 TASDVWMFAVCMWEILS 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 26/273 (9%)
Query: 247 KIGEGGFGPVYKG-QLADGTIIAVKQL-SSKSRQGNREFLNEI-AMISCLQHPNLVKIHG 303
+IG G +G V K G I+AVK++ S+ + ++ L ++ ++ P +V+ +G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFK 363
+ E M + + + + KI L + L L E K
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LK 146
Query: 364 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEY-----ALW 418
I+HRDIK +N+LLDR N K+ DFG++ + + TR AG YMAPE +
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 419 GYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQDGKLVELVDERL 478
GY ++DV+S GI E+ +G+ Y W Q ++V+ +L
Sbjct: 205 GY-DVRSDVWSLGITLYELATGR--FPYP-----------KWNSVFDQLTQVVKGDPPQL 250
Query: 479 GSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ ++E + I LC S RP E+
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 37/245 (15%)
Query: 211 TKRHKETAFMKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAV 269
T HKE +L K I + + +G G +G V + G IAV
Sbjct: 28 TMSHKERPTFYRQELN------KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAV 81
Query: 270 KQLSS--KSRQGNREFLNEIAMISCLQHPNLVKIHGCCV------EGDQLLLVYEYME-- 319
K+LS +S + E+ ++ ++H N++ + E + + LV M
Sbjct: 82 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGAD 141
Query: 320 -NNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR 378
NN + C ++ Q + I RGL ++H I+HRD+K +N+ ++
Sbjct: 142 LNNIVKCQKLTDDHV---------QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNE 189
Query: 379 DLNPKISDFGLAKLDEGDKT-HISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALE 436
D KI DFGLA+ + + T +++TR Y APE L W + D++S G + E
Sbjct: 190 DCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAE 244
Query: 437 IVSGK 441
+++G+
Sbjct: 245 LLTGR 249
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNR-----EFLNEIAMISCLQHPNLVK 300
K++G G FG V KG ++ + + N E L E ++ L +P +V+
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK----ICLGIARGLAFL 356
+ G C E + +LV E E G N L+ + + K + ++ G+ +L
Sbjct: 77 MIGIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYL 127
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG--TIGYMAPE 414
EES F VHRD+ A NVLL KISDFGL+K D+ + G + + APE
Sbjct: 128 -EESNF--VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 415 YALWGYLTYKADVYSFGIVALEIVS 439
+ + K+DV+SFG++ E S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCLQH 295
+FD + +G+G FG VY + I+A+K L + + E+ + S L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARGLA 354
PN+++++G + ++ L+ EY ++ RE +L D +A L+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSRFDEQRTATYITELANALS 126
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
+ H + +++HRDIK N+LL + KI+DFG + + + GT+ Y+ PE
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPE 180
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
K D++S G++ E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIAMISCL 293
A +F+ + +G+G FG VY + I+A+K L + + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICLGIARG 352
+HPN+++++G + ++ L+ EY ++ RE +L + D +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYITELANA 123
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
L++ H + +++HRDIK N+LL KI+DFG + + + GT+ Y+
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLP 177
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGK 441
PE K D++S G++ E + GK
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 248 IGEGGFGPVYKGQ----LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
+G+G FG V K + + + + + S+K++ + L E+ ++ L HPN++K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFE 88
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFK 363
+ +V E L + R+ E D +I + G+ ++H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFS-EHD---AARIIKQVFSGITYMHKHN--- 141
Query: 364 IVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
IVHRD+K N+LL ++D + KI DFGL+ + + T + RI GT Y+APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 421 LTYKADVYSFGIVALEIVSG 440
K DV+S G++ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQLSSKSRQG---NREFLNEIA 288
K+ + A +F+ + +G+G FG VY + I+A+K L + + E+
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL 347
+ S L+HPN+++++G + ++ L+ EY ++ RE +L + D
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY-----RELQKLSKFDEQRTATYIT 141
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A L++ H + +++HRDIK N+LL KI+DFG + + + GT
Sbjct: 142 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGT 195
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ Y+ PE K D++S G++ E + GK
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFL-----NEIAMIS 291
AT+ ++ +IG G +G VYK + G +A+K + + G L E+A++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 292 CLQ---HPNLVKIHGCCVEGD-----QLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
L+ HPN+V++ C ++ LV+E+++ + L L L + T +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAE--TIK 123
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR 403
+ RGL FLH IVHRD+K N+L+ K++DFGLA++ T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 404 IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+ T+ Y APE L D++S G + E+ K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 18/210 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSK---SRQGNREFLNEIAMISCLQH 295
++F+ + IG+G FG V Q D + A+K ++ + R R E+ ++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P LV + + + + +V + + L L ++N + + T + + L +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEE--TVKLFICELVMALDY 130
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEY 415
L + +I+HRD+K N+LLD + I+DF +A + + T I+T +AGT YMAPE
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMAPEM 185
Query: 416 AL----WGYLTYKADVYSFGIVALEIVSGK 441
GY ++ D +S G+ A E++ G+
Sbjct: 186 FSSRKGAGY-SFAVDWWSLGVTAYELLRGR 214
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 248 IGEGGFGPVYKGQ----LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
+G+G FG V K + + + + + S+K++ + L E+ ++ L HPN++K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFE 88
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFK 363
+ +V E L + R+ E D +I + G+ ++H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFS-EHD---AARIIKQVFSGITYMHKHN--- 141
Query: 364 IVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
IVHRD+K N+LL ++D + KI DFGL+ + + T + RI GT Y+APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 421 LTYKADVYSFGIVALEIVSG 440
K DV+S G++ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 242 FDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVK 300
+D +++G G FG V++ + A G + K +++ NEI++++ L HP L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR----GLAFL 356
+H + +++L+ E++ LF R E D+ + + R GL +
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGE----LFDRIAAE---DYKMSEAEVINYMRQACEGLKHM 165
Query: 357 HEESRFKIVHRDIKATNVLLD--RDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAP 413
HE S IVH DIK N++ + + + KI DFGLA KL+ + ++T T + AP
Sbjct: 166 HEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAP 219
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSG 440
E + + D+++ G++ ++SG
Sbjct: 220 EIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS L H N+V+ G ++ ++ E M L L R + L +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 147 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 198
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLN-EIAMISC 292
++++ +++G G F V K G+ I ++L S R +RE + E+ ++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
++HPN++ +H ++L+ E + L L +E+ L D T + I G
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT--QFLKQILDG 141
Query: 353 LAFLHEESRFKIVHRDIKATNV-LLDRDL-NPKIS--DFGLA-KLDEGDKTHISTRIAGT 407
+ +LH + +I H D+K N+ LLD+++ NP+I DFG+A K++ G++ I GT
Sbjct: 142 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 195
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 41/230 (17%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNL 298
++F+ +G+G FG V K + A D A+K++ + + L+E+ +++ L H +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVXLLASLNHQYV 64
Query: 299 VKIHGCCVE-------------GDQLLLVYEYMENNSLACALFGRENCELELD--WPTRQ 343
V+ + +E L + EY EN +L L EN + D W
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL-YDLIHSENLNQQRDEYW---- 119
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA----------KLD 393
++ I L+++H + I+HR++K N+ +D N KI DFGLA KLD
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 394 E----GDKTHISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIV 438
G ++++ I GT Y+A E G+ K D YS GI+ E +
Sbjct: 177 SQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS L H N+V+ G ++ ++ E M L L R + L +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 161 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 212
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEI 287
K + + +G G +G V Y +L +AVK+LS +S R E+
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYREL 70
Query: 288 AMISCLQHPNLVKI-----HGCCVEG-DQLLLVYEYME---NNSLACALFGRENCELELD 338
++ L+H N++ + +E ++ LV M NN + C E+
Sbjct: 71 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHV----- 125
Query: 339 WPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDK 397
Q + + RGL ++H I+HRD+K +NV ++ D +I DFGLA+ DE
Sbjct: 126 ----QFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT 178
Query: 398 THISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
+++TR Y APE L W + D++S G + E++ GK
Sbjct: 179 GYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLA--DGTII--AVKQLSSK--SRQGNREFLN 285
L+ + F + +G+G FG V + QL DG+ + AVK L + + EFL
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 286 EIAMISCLQHPNLVKIHGCCVEGDQ------LLLVYEYMENNSLACALFGRENCELELDW 339
E A + HP++ K+ G + +++ +M++ L L E +
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 340 P--TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGD 396
P T + + IA G+ +L S +HRD+ A N +L D+ ++DFGL+ K+ GD
Sbjct: 135 PLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 397 KTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ ++A E T +DV++FG+ EI++
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREF--LNEIAMISCLQ 294
AT+ ++ +IG G +G VYK + G +A+K + + + + E+A++ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 295 ---HPNLVKIHGCCVEGD-----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
HPN+V++ C ++ LV+E+++ + L L L + T + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAE--TIKDLM 118
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG 406
RGL FLH IVHRD+K N+L+ K++DFGLA++ +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T+ Y APE L D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 168
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 169 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 221
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 222 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K N+FD K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTE----ERARFYGAEIV 115
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L +LH +V+RDIK N++LD+D + KI+DFGL K D + GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+APE D + G+V E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 112
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 170
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 171 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 223
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 224 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K N+FD K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTE----ERARFYGAEIV 115
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L +LH +V+RDIK N++LD+D + KI+DFGL K D + GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+APE D + G+V E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 81
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 139
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 140 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 192
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 193 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K N+FD K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTE----ERARFYGAEIV 120
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L +LH +V+RDIK N++LD+D + KI+DFGL K D + GT Y
Sbjct: 121 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 176
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+APE D + G+V E++ G+
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
K N+FD K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTE----ERARFYGAEIV 115
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L +LH +V+RDIK N++LD+D + KI+DFGL K D + GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
+APE D + G+V E++ G+
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 104
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 162
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 163 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 215
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 216 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 35/225 (15%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEI 287
K + + +G G +G V Y +L +AVK+LS +S R E+
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYREL 78
Query: 288 AMISCLQHPNLVKI-----HGCCVEG-DQLLLVYEYME---NNSLACALFGRENCELELD 338
++ L+H N++ + +E ++ LV M NN + C E+
Sbjct: 79 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHV----- 133
Query: 339 WPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDK 397
Q + + RGL ++H I+HRD+K +NV ++ D +I DFGLA+ DE
Sbjct: 134 ----QFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT 186
Query: 398 THISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
+++TR Y APE L W + D++S G + E++ GK
Sbjct: 187 GYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 114
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 172
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 173 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 225
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 226 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 155
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 213
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 214 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 266
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 267 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREF--LNEIAMISCLQ 294
AT+ ++ +IG G +G VYK + G +A+K + + + + E+A++ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 295 ---HPNLVKIHGCCVEGD-----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
HPN+V++ C ++ LV+E+++ + L L L + T + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAE--TIKDLM 118
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG 406
RGL FLH IVHRD+K N+L+ K++DFGLA++ +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-- 173
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T+ Y APE L D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 89
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 147
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 148 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 200
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 201 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 248 IGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGNR------EFLNEIAMISCLQHPNLVK 300
+G G FG V G+ G +AVK L+ RQ R + EI + +HP+++K
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ + +V EY+ L F LD +++ I G+ + H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYCH--- 133
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPEYALWG 419
R +VHRD+K NVLLD +N KI+DFGL+ + +G+ S G+ Y APE + G
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPE-VISG 189
Query: 420 --YLTYKADVYSFGIVALEIVSG 440
Y + D++S G++ ++ G
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCG 212
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + CA ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHV------- 123
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 124 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 178
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGKN 442
++TR Y APE L W + D++S G + E+++G+
Sbjct: 179 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 134
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 187
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 188 -YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 173 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 224
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 225 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 153 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 204
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 205 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ C + ++L Y +N L + + D + I L +
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 152
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 147 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 198
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 161 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 212
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 163 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 214
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 215 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 161 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 212
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 138
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 139 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 191
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGK 441
E + + ++D++S G+ +E+ G+
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNR-EFLNEIAMISCLQHPN 297
++F+ ++G G G V+K G ++A K + + + R + + E+ ++ P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V +G ++ + E+M+ SL L GR + K+ + + +GL +
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR------IPEQILGKVSIAVIKGLTY 119
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMAP 413
L E + KI+HRD+K +N+L++ K+ DFG++ +D ++ GT YM+P
Sbjct: 120 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----MANSFVGTRSYMSP 172
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGK 441
E + + ++D++S G+ +E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 146 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 197
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 238 ATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREF--LNEIAMISCLQ 294
AT+ ++ +IG G +G VYK + G +A+K + + + + E+A++ L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 295 ---HPNLVKIHGCCVEGD-----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
HPN+V++ C ++ LV+E+++ + L L L + T + +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAE--TIKDLM 118
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG 406
RGL FLH IVHRD+K N+L+ K++DFGLA++ +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVVV 173
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T+ Y APE L D++S G + E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 146 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 197
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 168
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 169 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 221
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 222 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 138 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAR----DIYRAS 189
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 27/223 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHIS 401
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ D S
Sbjct: 147 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAQ----DIYRAS 198
Query: 402 TRIAG-----TIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
G + +M PE + G T K D +SFG++ EI S
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEI-----AMISCLQ 294
+FD + IG G + V +L I ++ K + E ++ +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HP LV +H C +L V EY+ L + + E + I+ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE----HARFYSAEISLALN 120
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMA 412
+LHE I++RD+K NVLLD + + K++D+G+ K L GD T + GT Y+A
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 174
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGKN 442
PE + D ++ G++ E+++G++
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEI-----AMISCLQ 294
+FD + IG G + V +L I ++ K + E ++ +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HP LV +H C +L V EY+ L + + E + I+ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE----HARFYSAEISLALN 124
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMA 412
+LHE I++RD+K NVLLD + + K++D+G+ K L GD T + GT Y+A
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 178
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGKN 442
PE + D ++ G++ E+++G++
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + IG G +G V G +AVK+LS +S + E+ +
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 132
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 133 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 187
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 188 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEI-----AMISCLQ 294
+FD + IG G + V +L I ++ K + E ++ +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HP LV +H C +L V EY+ L + + +L + I+ L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALN 135
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMA 412
+LHE I++RD+K NVLLD + + K++D+G+ K L GD T + GT Y+A
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 189
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGKN 442
PE + D ++ G++ E+++G++
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 146
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 147 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 199
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 200 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 13/219 (5%)
Query: 228 ISFTLKQIKAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNE 286
+S + + N F+ K +G+G FG V + A G A+K L + E +
Sbjct: 139 VSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 198
Query: 287 IAMISCLQ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
+ LQ HP L + D+L V EY L L RE E R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSE----DRA 253
Query: 344 KIC-LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST 402
+ I L +LH E +V+RD+K N++LD+D + KI+DFGL K D + T
Sbjct: 254 RFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 311
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
GT Y+APE D + G+V E++ G+
Sbjct: 312 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 13/219 (5%)
Query: 228 ISFTLKQIKAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNE 286
+S + + N F+ K +G+G FG V + A G A+K L + E +
Sbjct: 136 VSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT 195
Query: 287 IAMISCLQ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
+ LQ HP L + D+L V EY L L RE E R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSE----DRA 250
Query: 344 KIC-LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST 402
+ I L +LH E +V+RD+K N++LD+D + KI+DFGL K D + T
Sbjct: 251 RFYGAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
GT Y+APE D + G+V E++ G+
Sbjct: 309 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCEL-ELDWPTRQKICL---GIARGLAFLHEESR 361
E M++ L L G + +L + + IC I RGL ++H +
Sbjct: 111 RAP-----TIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 164
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL-- 417
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 165 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 418 WGYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 223 KGY-TKSIDIWSVGCILAEMLSNR 245
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 146
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 147 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 199
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 200 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 248 IGEGGFGPVYKG---------QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNL 298
+G+G F ++KG QL + T + +K L R + F +M+S L H +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
V +G CV GD+ +LV E+++ SL L +NC + + W + ++ +A + FL E
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC-INILW--KLEVAKQLAAAMHFLEE 131
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTR--IAGTIGYMAPE- 414
+ ++H ++ A N+LL R+ + K + KL D G + + + I ++ PE
Sbjct: 132 NT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
L D +SFG EI SG
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 84
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 142
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 143 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 195
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 196 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 95
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 153
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 154 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 206
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 207 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEI-----AMISCLQ 294
+FD + IG G + V +L I ++ K + E ++ +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HP LV +H C +L V EY+ L + + +L + I+ L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAEISLALN 167
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTHISTRIAGTIGYMA 412
+LHE I++RD+K NVLLD + + K++D+G+ K L GD T + GT Y+A
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIA 221
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSGKN 442
PE + D ++ G++ E+++G++
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 134
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 188 -YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 77
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 135
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 136 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 188
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 189 -YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 134
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 188 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 132
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 133 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 187
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 188 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 80
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 138
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 139 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 191
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 192 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 17/218 (7%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQ---GNREFLNEI 287
L++ N F + +G+GGFG V Q+ A G + A K+L K + G LNE
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
++ + +V + D L LV M L ++ + +P + +
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG----QAGFPEARAVFY 291
Query: 348 G--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRI 404
I GL LH E +IV+RD+K N+LLD + +ISD GLA + EG I R+
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV 346
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKN 442
GT+GYMAPE T+ D ++ G + E+++G++
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKI 301
+ + K IG G FG V++ +L + +A+K++ R NR E+ ++ ++HPN+V +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDL 97
Query: 302 HGCCVE-GDQ-----LLLVYEYMENNSLACALFGRENCELELDWPTR--QKICLGIARGL 353
GD+ L LV EY+ + R +L+ P + + R L
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRAS---RHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAKL---DEGDKTHISTRIAGTIG 409
A++H I HRDIK N+LLD K+ DFG AK+ E + + I +R
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY----- 206
Query: 410 YMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y D++S G V E++ G+
Sbjct: 207 YRAPEL-IFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 129
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 130 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 184
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 185 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 138
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 139 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 193
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 194 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 139
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 140 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 194
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 195 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 125
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 126 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 180
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 181 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 17/218 (7%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQ---GNREFLNEI 287
L++ N F + +G+GGFG V Q+ A G + A K+L K + G LNE
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
++ + +V + D L LV M L ++ + +P + +
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG----QAGFPEARAVFY 291
Query: 348 G--IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRI 404
I GL LH E +IV+RD+K N+LLD + +ISD GLA + EG I R+
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV 346
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKN 442
GT+GYMAPE T+ D ++ G + E+++G++
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 124
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 125 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 179
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 180 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 133
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 134 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 188
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 189 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ R NRE + ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 300 KIH------GCCVEGDQLLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ G + L LV +Y+ A + R L + + + + R
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 134
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 188 -YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 146
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 147 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 201
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 202 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ S +G G +G V G +A+K+LS +S + E+ ++ +QH
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 297 NLVKIHGCCVEGDQL------LLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + L LV +M+ + + G E E ++ Q + +
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKI-----QYLVYQML 154
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-HISTRIAGTIG 409
+GL ++H +VHRD+K N+ ++ D KI DFGLA+ + + T ++ TR
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W 206
Query: 410 YMAPEYAL-WGYLTYKADVYSFGIVALEIVSGKN 442
Y APE L W + D++S G + E+++GK
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 132
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 133 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 187
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 188 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 123
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 124 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 178
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 179 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGT----IIAVKQLSS----KSRQGNREFLNEIAMISCL 293
F+ + +G+GG+G V++ + G I A+K L ++ + E ++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR-- 351
+HP +V + G +L L+ EY+ L L RE +E C +A
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFME------DTACFYLAEIS 131
Query: 352 -GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L LH++ I++RD+K N++L+ + K++DFGL K D T ++ GTI Y
Sbjct: 132 MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEY 187
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
MAPE + D +S G + ++++G
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 139
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 140 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 194
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 195 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 133
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 134 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 188
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 189 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 129
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 130 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 184
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 185 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 139
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 140 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 194
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 195 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 129
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 130 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 184
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 185 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNR---EFLNEIAMISCLQ 294
++ ++ + +G GG V+ + L D +AVK L + + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 295 HPNLVKIHGC----CVEGDQLLLVYEYMENNSLACALFGRENCELELDW-PTRQ-KICLG 348
HP +V ++ G +V EY++ +L R+ E P R ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL------RDIVHTEGPMTPKRAIEVIAD 124
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEGDKTHISTRIAG 406
+ L F H+ I+HRD+K N+L+ K+ DFG+A+ D G+ + + G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T Y++PE A + ++DVYS G V E+++G+
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 132
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 133 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 187
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 188 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 126
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 127 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 181
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 182 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQLADGT----IIAVKQLSS----KSRQGNREFLNEIAMISCL 293
F+ + +G+GG+G V++ + G I A+K L ++ + E ++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR-- 351
+HP +V + G +L L+ EY+ L L RE +E C +A
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFME------DTACFYLAEIS 131
Query: 352 -GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
L LH++ I++RD+K N++L+ + K++DFGL K D T ++ GTI Y
Sbjct: 132 MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEY 187
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
MAPE + D +S G + ++++G
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 94/219 (42%), Gaps = 19/219 (8%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAK-LDEGDKTHI 400
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ +
Sbjct: 187 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 401 STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +M PE + G T K D +SFG++ EI S
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 124
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 125 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 179
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 180 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 147
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 148 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 202
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 203 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 134
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 135 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 189
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 190 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K IG G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EYM + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ K++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 150
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 151 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 205
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 206 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 138
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 139 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 193
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 194 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K IG G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EYM + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ K++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 129
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 130 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY 184
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 185 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 123
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 124 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 178
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 179 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 133
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 134 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY 188
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 189 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 147
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 148 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 202
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 203 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 94/219 (42%), Gaps = 19/219 (8%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLA------DGTIIAVKQLSSK-SRQGNREFLNEIA 288
+ N + +G G FG VY+GQ++ +AVK L S Q +FL E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF---GRENCELELDWPTRQKI 345
+IS H N+V+ G ++ ++ E M L L R + L +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAK-LDEGDKTHI 400
IA G +L EE+ F +HRDI A N LL P KI DFG+A+ +
Sbjct: 164 ARDIACGCQYL-EENHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 401 STRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVS 439
+ +M PE + G T K D +SFG++ EI S
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
+F + IG GGFG V+K + DG +K++ + + RE + ++ L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 300 KIHGCCVEGDQLLLVYEYMENNS----LACALFGRENCEL-------------ELDWPTR 342
+GC D E NS C E C+ +LD
Sbjct: 68 HYNGCW---DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 343 QKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST 402
++ I +G+ ++H + K+++RD+K +N+ L KI DFGL + D
Sbjct: 125 LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--X 179
Query: 403 RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIV 438
R GT+ YM+PE + D+Y+ G++ E++
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 133
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 134 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 188
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 189 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 146
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 147 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 201
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 202 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI 400
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ H
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HT 175
Query: 401 STRIAGTIG---YMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
+AG + Y APE L W + D++S G + E+++G+
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 137
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 138 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 192
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 193 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 37/214 (17%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKSRQG-NREFLNEIAMISCLQHPNLVKIHGCCV 306
+G+G +G V++G L G +AVK SS+ Q RE EI L+H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 307 ----EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE--- 359
QL L+ Y E+ SL R+ E L ++ + A GLA LH E
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLY-DFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFG 127
Query: 360 --SRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--------LDEGDKTHISTRIAGTIG 409
+ I HRD K+ NVL+ +L I+D GLA LD G+ + GT
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-----GTKR 182
Query: 410 YMAPEY-----ALWGYLTYK-ADVYSFGIVALEI 437
YMAPE + +YK D+++FG+V EI
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQL--SSKSRQG-NREFLNEI 287
+ + K ++FD + +G+G FG VY + + I+A+K L S ++G + EI
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKI 345
+ S L+HPN+++++ + ++ L+ E+ L L GR D
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR------FDEQRSATF 119
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST--- 402
+A L + HE K++HRDIK N+L+ KI+DFG + H +
Sbjct: 120 MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRR 169
Query: 403 -RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+ GT+ Y+ PE K D++ G++ E + G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI 400
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ H
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HT 175
Query: 401 STRIAGTIG---YMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
+AG + Y APE L W + D++S G + E+++G+
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 220 MKESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD--GT--IIAVKQLSSK 275
M D + S L ++K NF +G+G FG V LAD GT + A+K L
Sbjct: 1 MPSEDRKQPSNNLDRVKLTDFNFLMV--LGKGSFGKV---MLADRKGTEELYAIKILKKD 55
Query: 276 SRQGNREF---LNEIAMISCLQHPN-LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FG 329
+ + + E +++ L P L ++H C D+L V EY+ L + G
Sbjct: 56 VVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG 115
Query: 330 RENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 389
+ P I+ GL FLH+ I++RD+K NV+LD + + KI+DFG+
Sbjct: 116 K------FKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGM 166
Query: 390 AKLDEGDKTHISTR-IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
K E ++TR GT Y+APE + D +++G++ E+++G+
Sbjct: 167 CK--EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
+ N F+ K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSE----DRARFYGAEIV 118
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR-IAGTIG 409
L +LH E +V+RD+K N++LD+D + KI+DFGL K EG K + + GT
Sbjct: 119 SALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 174
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
Y+APE D + G+V E++ G+
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQL--SSKSRQG-NREFLNEI 287
+ + K ++FD + +G+G FG VY + I+A+K L S ++G + EI
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKI 345
+ S L+HPN+++++ + ++ L+ E+ L L GR D
Sbjct: 67 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR------FDEQRSATF 120
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST--- 402
+A L + HE K++HRDIK N+L+ KI+DFG + H +
Sbjct: 121 MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRR 170
Query: 403 -RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+ GT+ Y+ PE K D++ G++ E + G
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 123
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI 400
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ H
Sbjct: 124 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HT 171
Query: 401 STRIAGTIG---YMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
+AG + Y APE L W + D++S G + E+++G+
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
+ N F+ K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSE----DRARFYGAEIV 120
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR-IAGTIG 409
L +LH E +V+RD+K N++LD+D + KI+DFGL K EG K + + GT
Sbjct: 121 SALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 176
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
Y+APE D + G+V E++ G+
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKS-RQGNREFLNEIAMISCLQHPNLVKIHGC 304
+ IG+G FG V++G+ G +AVK SS+ R RE EI L+H N++
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAA 66
Query: 305 CVEGD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE- 359
+ + QL LV +Y E+ SL L R +E K+ L A GLA LH E
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE----GMIKLALSTASGLAHLHMEI 121
Query: 360 ----SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI---STRIAGTIGYMA 412
+ I HRD+K+ N+L+ ++ I+D GLA + I GT YMA
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 413 PEYA-----LWGYLTYK-ADVYSFGIVALEI 437
PE + + ++K AD+Y+ G+V EI
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQL--SSKSRQG-NREFLNEI 287
+ + K ++FD + +G+G FG VY + I+A+K L S ++G + EI
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKI 345
+ S L+HPN+++++ + ++ L+ E+ L L GR D
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR------FDEQRSATF 119
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST--- 402
+A L + HE K++HRDIK N+L+ KI+DFG + H +
Sbjct: 120 MEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRR 169
Query: 403 -RIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+ GT+ Y+ PE K D++ G++ E + G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
+ N F+ K +G+G FG V + A G A+K L + E + + LQ
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 295 ---HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC-LGIA 350
HP L + D+L V EY L L RE E R + I
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSE----DRARFYGAEIV 119
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTR-IAGTIG 409
L +LH E +V+RD+K N++LD+D + KI+DFGL K EG K + + GT
Sbjct: 120 SALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE 175
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
Y+APE D + G+V E++ G+
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKS-RQGNREFLNEIAMISCLQHPNLVKIHGC 304
+ IG+G FG V++G+ G +AVK SS+ R RE EI L+H N++
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAA 91
Query: 305 CVEGD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE- 359
+ + QL LV +Y E+ SL L R +E K+ L A GLA LH E
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE----GMIKLALSTASGLAHLHMEI 146
Query: 360 ----SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI---STRIAGTIGYMA 412
+ I HRD+K+ N+L+ ++ I+D GLA + I GT YMA
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 413 PEYA-----LWGYLTYK-ADVYSFGIVALEI 437
PE + + ++K AD+Y+ G+V EI
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKS-RQGNREFLNEIAMISCLQHPNLVKIHGC 304
+ IG+G FG V++G+ G +AVK SS+ R RE EI L+H N++
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAA 104
Query: 305 CVEGD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE- 359
+ + QL LV +Y E+ SL L R +E K+ L A GLA LH E
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE----GMIKLALSTASGLAHLHMEI 159
Query: 360 ----SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI---STRIAGTIGYMA 412
+ I HRD+K+ N+L+ ++ I+D GLA + I GT YMA
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 413 PEYA-----LWGYLTYK-ADVYSFGIVALEI 437
PE + + ++K AD+Y+ G+V EI
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNR---EFLNEIAMISCLQ 294
++ ++ + +G GG V+ + L D +AVK L + + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 295 HPNLVKIHGC----CVEGDQLLLVYEYMENNSLACALFGRENCELELDW-PTRQ-KICLG 348
HP +V ++ G +V EY++ +L R+ E P R ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL------RDIVHTEGPMTPKRAIEVIAD 124
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEGDKTHISTRIAG 406
+ L F H+ I+HRD+K N+++ K+ DFG+A+ D G+ + + G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T Y++PE A + ++DVYS G V E+++G+
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAMIS 291
+ +NF+ + +G+G FG V ++ + G + AVK L + + + E ++S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 292 CLQ-HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
+ HP L ++ C D+L V E++ L +F + D + I
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSR-RFDEARARFYAAEII 134
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIST-RIAGTIG 409
L FLH++ I++RD+K NVLLD + + K++DFG+ K EG ++T GT
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPD 189
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE D ++ G++ E++ G
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNR---EFLNEIAMISCLQ 294
++ ++ + +G GG V+ + L D +AVK L + + F E + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 295 HPNLVKIHGC----CVEGDQLLLVYEYMENNSLACALFGRENCELELDW-PTRQ-KICLG 348
HP +V ++ G +V EY++ +L R+ E P R ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL------RDIVHTEGPMTPKRAIEVIAD 124
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEGDKTHISTRIAG 406
+ L F H+ I+HRD+K N+++ K+ DFG+A+ D G+ + + G
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
T Y++PE A + ++DVYS G V E+++G+
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
AGT Y+APE L D ++ G++ E+ +G
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGX 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 134
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + T +
Sbjct: 135 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY 189
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 190 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMIS 291
K +F K +GEG F V +LA A+K L + ++ ++ E ++S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR 351
L HP VK++ + ++L Y +N L + + D + I
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVS 121
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGY 410
L +LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++PE +D+++ G + ++V+G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMIS 291
K +F K +GEG F V +LA A+K L + ++ ++ E ++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR 351
L HP VK++ + ++L Y +N L + + D + I
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVS 119
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGY 410
L +LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++PE +D+++ G + ++V+G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 134
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + T +
Sbjct: 135 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY 189
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 190 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVKQLSSKS-RQGNREFLNEIAMISCLQHPNLVKIHGC 304
+ IG+G FG V++G+ G +AVK SS+ R RE EI L+H N++
Sbjct: 15 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAA 71
Query: 305 CVEGD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE- 359
+ + QL LV +Y E+ SL L R +E K+ L A GLA LH E
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE----GMIKLALSTASGLAHLHMEI 126
Query: 360 ----SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI---STRIAGTIGYMA 412
+ I HRD+K+ N+L+ ++ I+D GLA + I GT YMA
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 413 PEYA-----LWGYLTYK-ADVYSFGIVALEI 437
PE + + ++K AD+Y+ G+V EI
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 134
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + T +
Sbjct: 135 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY 189
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 190 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMIS 291
K +F K +GEG F V +LA A+K L + ++ ++ E ++S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR 351
L HP VK++ + ++L Y +N L + + D + I
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVS 118
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGY 410
L +LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++PE +D+++ G + ++V+G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 27/209 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS-RQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
IG+G FG V++G+ G +AVK SS+ R RE EI L+H N++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 67
Query: 307 EGD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE--- 359
+ + QL LV +Y E+ SL L R +E K+ L A GLA LH E
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE----GMIKLALSTASGLAHLHMEIVG 122
Query: 360 --SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI---STRIAGTIGYMAPE 414
+ I HRD+K+ N+L+ ++ I+D GLA + I GT YMAPE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 415 YA-----LWGYLTYK-ADVYSFGIVALEI 437
+ + ++K AD+Y+ G+V EI
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMIS 291
K +F K +GEG F V +LA A+K L + ++ ++ E ++S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 292 CLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIAR 351
L HP VK++ + ++L Y +N L + + D + I
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVS 120
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGY 410
L +LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++PE +D+++ G + ++V+G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ C+ + IC I RGL ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQ----HLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 208 GY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 27/209 (12%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKS-RQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
IG+G FG V++G+ G +AVK SS+ R RE EI L+H N++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 70
Query: 307 EGD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE--- 359
+ + QL LV +Y E+ SL L R +E K+ L A GLA LH E
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE----GMIKLALSTASGLAHLHMEIVG 125
Query: 360 --SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI---STRIAGTIGYMAPE 414
+ I HRD+K+ N+L+ ++ I+D GLA + I GT YMAPE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 415 YA-----LWGYLTYK-ADVYSFGIVALEI 437
+ + ++K AD+Y+ G+V EI
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 150
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTH 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ D+ +
Sbjct: 151 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY 205
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 206 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL----ELDWPTRQKI 345
+ ++H N++ + L E + L L G + + +L Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-HISTRI 404
I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +++TR
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR- 186
Query: 405 AGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
Y APE L W + D++S G + E+++G+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 206 GY-TKSIDIWSVGCILAEMLSNR 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI D+GLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 242 FDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLN-EIAMISCLQHPNLV 299
++ + IG GGF V + G ++A+K + + + + EI + L+H ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
+++ +++ +V EY L + ++ E + + I +A++H +
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE----ETRVVFRQIVSAVAYVHSQ 127
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALW- 418
HRD+K N+L D K+ DFGL +G+K + G++ Y APE
Sbjct: 128 G---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 419 GYLTYKADVYSFGIVALEIVSG 440
YL +ADV+S GI+ ++ G
Sbjct: 185 SYLGSEADVWSMGILLYVLMCG 206
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 248 IGEGGFGPVYKG---------QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNL 298
+G+G F ++KG QL + T + +K L R + F +M+S L H +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHE-TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
V +G C GD+ +LV E+++ SL L +NC + + W + ++ +A + FL E
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC-INILW--KLEVAKQLAWAMHFLEE 131
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL-DEGDKTHISTR--IAGTIGYMAPE- 414
+ ++H ++ A N+LL R+ + K + KL D G + + + I ++ PE
Sbjct: 132 NT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
L D +SFG EI SG
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 23/222 (10%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQ-----LADGTIIAVKQLSSKSRQG--NREF 283
T KQ K + +D +++G G F V K + L K+ S SR+G E
Sbjct: 4 TFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEI 62
Query: 284 LNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
E++++ + HPN++ +H ++L+ E + L L +E+ L
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEAT 118
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNV-LLDRDL---NPKISDFGLA-KLDEGDKT 398
I G+ +LH + KI H D+K N+ LLD+++ + K+ DFGLA ++++G +
Sbjct: 119 SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
Query: 399 HISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
I GT ++APE + L +AD++S G++ ++SG
Sbjct: 176 ---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 239 TNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++N+D +++G+G F V + G II K+LS++ Q + E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRE-NCELELDWPTRQKICLGIAR 351
LQHPN+V++H E LV++ + L + RE E + +Q I
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-----ILE 139
Query: 352 GLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLA-KLDEGDKTHISTRIAGT 407
+A+ H IVHR++K N+LL + K++DFGLA ++++ + H AGT
Sbjct: 140 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGT 193
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY++PE + D+++ G++ ++ G
Sbjct: 194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 35/225 (15%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEI 287
K + + +G G +G V Y +L +AVK+LS +S R E+
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYREL 78
Query: 288 AMISCLQHPNLVKI-----HGCCVEG-DQLLLVYEYME---NNSLACALFGRENCELELD 338
++ L+H N++ + +E ++ LV M NN + E+
Sbjct: 79 RLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHV----- 133
Query: 339 WPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDK 397
Q + + RGL ++H I+HRD+K +NV ++ D +I DFGLA+ DE
Sbjct: 134 ----QFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT 186
Query: 398 THISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
+++TR Y APE L W + D++S G + E++ GK
Sbjct: 187 GYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+ +D+++ G + ++V+G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREF--LNEIAMISCLQH 295
+ ++ KIG+G FG V+K + G +A+K++ ++ + L EI ++ L+H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 296 PNLVKIHGCCVEG--------DQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
N+V + C + LV+++ E++ LA L N ++ +++
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-LAGLL---SNVLVKFTLSEIKRVMQ 131
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG- 406
+ GL ++H R KI+HRD+KA NVL+ RD K++DFGLA+ K R
Sbjct: 132 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 188
Query: 407 --TIGYMAPEYAL 417
T+ Y PE L
Sbjct: 189 VVTLWYRPPELLL 201
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQ 278
+ I ++ ++ ++D K IG G FG V QL A + A+K LS R
Sbjct: 61 EKIVKKIRGLQMKAEDYDVVKVIGRGAFGEV---QLVRHKASQKVYAMKLLSKFEMIKRS 117
Query: 279 GNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLL-LVYEYMENNSLACALFGRENCELEL 337
+ F E +++ P +V++ C + D+ L +V EYM L + N ++
Sbjct: 118 DSAFFWEERDIMAFANSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPE 173
Query: 338 DWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGD 396
W + + L +H ++HRD+K N+LLD+ + K++DFG K+DE
Sbjct: 174 KWA--KFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 228
Query: 397 KTHISTRIAGTIGYMAPEYALW----GYLTYKADVYSFGIVALEIVSG 440
H T + GT Y++PE GY + D +S G+ E++ G
Sbjct: 229 MVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ S +G G +G V G +A+K+LS +S + E+ ++ +QH
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 297 NLVKIHGCCVEGDQL------LLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + L LV +M+ + + G + E ++ Q + +
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKI-----QYLVYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-HISTRIAGTIG 409
+GL ++H +VHRD+K N+ ++ D KI DFGLA+ + + T ++ TR
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W 188
Query: 410 YMAPEYAL-WGYLTYKADVYSFGIVALEIVSGKN 442
Y APE L W + D++S G + E+++GK
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ NRE + ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 134
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 187
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 188 -YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREF--LNEIAMISCLQH 295
+ ++ KIG+G FG V+K + G +A+K++ ++ + L EI ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 296 PNLVKIHGCCVEG--------DQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
N+V + C + LV+++ E++ LA L N ++ +++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-LAGLL---SNVLVKFTLSEIKRVMQ 132
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG- 406
+ GL ++H R KI+HRD+KA NVL+ RD K++DFGLA+ K R
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 407 --TIGYMAPEYAL 417
T+ Y PE L
Sbjct: 190 VVTLWYRPPELLL 202
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQH 295
++ + IG+G F V + GQ I+ V + +S + E ++ L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P++V++ L +V+E+M+ L + R + I L +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNP---KISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
H+ + I+HRD+K NVLL N K+ DFG+A + G+ ++ GT +MA
Sbjct: 146 CHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPHFMA 201
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSG 440
PE DV+ G++ ++SG
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + +E LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ K++DFGLAK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL----ELDWPTRQKI 345
+ ++H N++ + L E + L L G + + +L Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-HISTRI 404
I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +++TR
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 186
Query: 405 AGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
Y APE L W + D++S G + E+++G+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ NRE + ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 134
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + ++I +R
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---- 187
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 188 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 147
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI 400
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ H
Sbjct: 148 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HT 195
Query: 401 STRIAGTIG---YMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
+ G + Y APE L W + D++S G + E+++G+
Sbjct: 196 DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K IG G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ K++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 204 GY-TKSIDIWSVGCILAEMLSNR 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREF--LNEIAMISCLQH 295
+ ++ KIG+G FG V+K + G +A+K++ ++ + L EI ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 296 PNLVKIHGCCVEG--------DQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
N+V + C + LV+++ E++ LA L N ++ +++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD-LAGLL---SNVLVKFTLSEIKRVMQ 132
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG- 406
+ GL ++H R KI+HRD+KA NVL+ RD K++DFGLA+ K R
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 407 --TIGYMAPEYAL 417
T+ Y PE L
Sbjct: 190 VVTLWYRPPELLL 202
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 206 GY-TKSIDIWSVGCILAEMLSNR 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 129
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 21/193 (10%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREF--LNEIAMISCLQH 295
+ ++ KIG+G FG V+K + G +A+K++ ++ + L EI ++ L+H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 296 PNLVKIHGCCVEGDQ--------LLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
N+V + C + LV+++ E++ LA L N ++ +++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHD-LAGLL---SNVLVKFTLSEIKRVMQ 132
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG- 406
+ GL ++H R KI+HRD+KA NVL+ RD K++DFGLA+ K R
Sbjct: 133 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 407 --TIGYMAPEYAL 417
T+ Y PE L
Sbjct: 190 VVTLWYRPPELLL 202
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 239 TNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++N+D +++G+G F V + G II K+LS++ Q + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRE-NCELELDWPTRQKICLGIAR 351
LQHPN+V++H E LV++ + L + RE E + +Q I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-----ILE 116
Query: 352 GLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLA-KLDEGDKTHISTRIAGT 407
+A+ H IVHR++K N+LL + K++DFGLA ++++ + H AGT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGT 170
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY++PE + D+++ G++ ++ G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQL-SSKSRQGNREFLNEIAMISCLQ 294
+ K+IG+G +G V+ G+ G +AVK +++ RE EI ++
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMR 89
Query: 295 HPNLVKIHGCCVEGD----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
H N++ ++G QL L+ +Y EN SL L LD + K+
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSV 144
Query: 351 RGLAFLHEE-----SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI----S 401
GL LH E + I HRD+K+ N+L+ ++ I+D GLA D + +
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 402 TRIAGTIGYMAPEYA--------LWGYLTYKADVYSFGIVALEI 437
TR+ GT YM PE Y+ AD+YSFG++ E+
Sbjct: 205 TRV-GTKRYMPPEVLDESLNRNHFQSYIM--ADMYSFGLILWEV 245
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 239 TNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++N+D +++G+G F V + G II K+LS++ Q + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRE-NCELELDWPTRQKICLGIAR 351
LQHPN+V++H E LV++ + L + RE E + +Q I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-----ILE 116
Query: 352 GLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLA-KLDEGDKTHISTRIAGT 407
+A+ H IVHR++K N+LL + K++DFGLA ++++ + H AGT
Sbjct: 117 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGT 170
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY++PE + D+++ G++ ++ G
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 239 TNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
++N+D +++G+G F V + G II K+LS++ Q + E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRE-NCELELDWPTRQKICLGIAR 351
LQHPN+V++H E LV++ + L + RE E + +Q I
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-----ILE 115
Query: 352 GLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLA-KLDEGDKTHISTRIAGT 407
+A+ H IVHR++K N+LL + K++DFGLA ++++ + H AGT
Sbjct: 116 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGT 169
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY++PE + D+++ G++ ++ G
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 204 GY-TKSIDIWSVGCILAEMLSNR 225
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 246 KKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQ---GNREFLNEIAMISCLQHPNLVKI 301
+ +G GGFG V+ Q+ A G + A K+L+ K + G + + E +++ + +V +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 302 HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESR 361
L LV M + ++ + P I GL LH+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
I++RD+K NVLLD D N +ISD GLA + +T + AGT G+MAPE L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 422 TYKADVYSFGIVALEIVSGKN 442
+ D ++ G+ E+++ +
Sbjct: 367 DFSVDYFALGVTLYEMIAARG 387
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 204 GY-TKSIDIWSVGCILAEMLSNR 225
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 246 KKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQ---GNREFLNEIAMISCLQHPNLVKI 301
+ +G GGFG V+ Q+ A G + A K+L+ K + G + + E +++ + +V +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 302 HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESR 361
L LV M + ++ + P I GL LH+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
I++RD+K NVLLD D N +ISD GLA + +T + AGT G+MAPE L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 422 TYKADVYSFGIVALEIVSGKN 442
+ D ++ G+ E+++ +
Sbjct: 367 DFSVDYFALGVTLYEMIAARG 387
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGP-VYKGQLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 246 KKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQ---GNREFLNEIAMISCLQHPNLVKI 301
+ +G GGFG V+ Q+ A G + A K+L+ K + G + + E +++ + +V +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 302 HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESR 361
L LV M + ++ + P I GL LH+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
I++RD+K NVLLD D N +ISD GLA + +T + AGT G+MAPE L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 422 TYKADVYSFGIVALEIVSGKN 442
+ D ++ G+ E+++ +
Sbjct: 367 DFSVDYFALGVTLYEMIAARG 387
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 246 KKIGEGGFGPVYKGQL-ADGTIIAVKQLSSKSRQ---GNREFLNEIAMISCLQHPNLVKI 301
+ +G GGFG V+ Q+ A G + A K+L+ K + G + + E +++ + +V +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 302 HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESR 361
L LV M + ++ + P I GL LH+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 362 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
I++RD+K NVLLD D N +ISD GLA + +T + AGT G+MAPE L
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEY 366
Query: 422 TYKADVYSFGIVALEIVSGKN 442
+ D ++ G+ E+++ +
Sbjct: 367 DFSVDYFALGVTLYEMIAARG 387
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 150
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 39/215 (18%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKSRQG-NREFLNEIAMISCLQHPNLVKIHGCCV 306
+G+G +G V++G G +AVK SS+ + RE E+ L+H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 307 ----EGDQLLLVYEYMENNSLACALFGRENCELE-LDWPTRQKICLGIARGLAFLHEE-- 359
QL L+ Y E SL L +L LD + +I L IA GLA LH E
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 360 ---SRFKIVHRDIKATNVLLDRDLNPKISDFGLA--------KLDEGDKTHISTRIAGTI 408
+ I HRD+K+ N+L+ ++ I+D GLA +LD G+ + GT
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 210
Query: 409 GYMAPEY-----ALWGYLTYK-ADVYSFGIVALEI 437
YMAPE + + +YK D+++FG+V E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQG-NREFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 208 GY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 12/206 (5%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKS--RQGNREFLN-EIAMISCLQH 295
+F K +GEG F V +LA A+K L + ++ ++ E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P VK++ + ++L Y +N L + + D + I L +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPE 414
LH + I+HRD+K N+LL+ D++ +I+DFG AK L K + GT Y++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 415 YALWGYLTYKADVYSFGIVALEIVSG 440
+D+++ G + ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 152
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 153 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 212 GY-TKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 204 GY-TKSIDIWSVGCILAEMLSNR 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 39/215 (18%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCCV 306
+G+G +G V++G G +AVK SS+ + RE E+ L+H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 307 ----EGDQLLLVYEYMENNSLACALFGRENCELE-LDWPTRQKICLGIARGLAFLHEE-- 359
QL L+ Y E SL L +L LD + +I L IA GLA LH E
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 360 ---SRFKIVHRDIKATNVLLDRDLNPKISDFGLA--------KLDEGDKTHISTRIAGTI 408
+ I HRD+K+ N+L+ ++ I+D GLA +LD G+ + GT
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 181
Query: 409 GYMAPEY-----ALWGYLTYK-ADVYSFGIVALEI 437
YMAPE + + +YK D+++FG+V E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ K IG G G V G +AVK+LS +++ + E+ ++ C+ H
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLC---- 135
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + T T Y
Sbjct: 136 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYY 189
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E+V G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 204 GY-TKSIDIWSVGCILAEMLSNR 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 39/215 (18%)
Query: 248 IGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCCV 306
+G+G +G V++G G +AVK SS+ + RE E+ L+H N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 307 ----EGDQLLLVYEYMENNSLACALFGRENCELE-LDWPTRQKICLGIARGLAFLHEE-- 359
QL L+ Y E SL L +L LD + +I L IA GLA LH E
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 360 ---SRFKIVHRDIKATNVLLDRDLNPKISDFGLA--------KLDEGDKTHISTRIAGTI 408
+ I HRD+K+ N+L+ ++ I+D GLA +LD G+ + GT
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 181
Query: 409 GYMAPEY-----ALWGYLTYK-ADVYSFGIVALEI 437
YMAPE + + +YK D+++FG+V E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 206 GY-TKSIDIWSVGCILAEMLSNR 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 283 FLNEIAMISCLQHPNLVKIHGC----CVEGDQLLLVYEYMENNSLACALFGRENCELELD 338
F E + L HP +V ++ G +V EY++ +L R+ E
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTL------RDIVHTEGP 112
Query: 339 W-PTRQ-KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DE 394
P R ++ + L F H+ I+HRD+K N+++ K+ DFG+A+ D
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 395 GDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
G+ + + GT Y++PE A + ++DVYS G V E+++G+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 271 QLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGR 330
++S KS+ +F NE+ +I+ +++ + G D++ ++YEYMEN+S+ F
Sbjct: 80 KISIKSKYD--DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL--KFDE 135
Query: 331 ENCELELDW----PTRQKICL--GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKI 384
L+ ++ P + C+ + +++H E I HRD+K +N+L+D++ K+
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKL 193
Query: 385 SDFGLAKLDEGDKTHISTRIAGTIGYMAPEY--ALWGYLTYKADVYSFGI 432
SDFG ++ DK +R GT +M PE+ Y K D++S GI
Sbjct: 194 SDFGESEY-MVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 165 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 224 GY-TKSIDIWSVGCILAEMLSNR 245
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++++ LV++ M+ L F ++ L +KI + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAP 413
LH + IVHRD+K N+LLD D+N K++DFG + +LD G+K + GT Y+AP
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 192
Query: 414 EYALW-------GYLTYKADVYSFGIVALEIVSG 440
E GY + D++S G++ +++G
Sbjct: 193 EIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAG 225
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 208 GY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++++ LV++ M+ L F ++ L +KI + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAP 413
LH + IVHRD+K N+LLD D+N K++DFG + +LD G+K + GT Y+AP
Sbjct: 126 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 179
Query: 414 EYALW-------GYLTYKADVYSFGIVALEIVSG 440
E GY + D++S G++ +++G
Sbjct: 180 EIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAG 212
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V T +A+K++S Q + L EI ++ +H N++ I
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKL----LKSQQLSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKL--DEGDKTHISTRIAGTIGYMAPEYAL--W 418
++HRD+K +N+L++ + KI DFGLA++ E D T T T Y APE L
Sbjct: 165 -VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 224 GY-TKSIDIWSVGCILAEMLSNR 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FXEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG-T 407
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++ A
Sbjct: 202 VAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQD 467
+ +MAPE T ++DV+SFG++ EI S S P ++ D + C ++
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCRRLKE 311
Query: 468 GKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
G + D Y E M + L C + PS RPT SE+
Sbjct: 312 GTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 346
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 33 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 146
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 147 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 199
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 209 GY-TKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 150
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 151 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 210 GY-TKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 141
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 142 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 201 GY-TKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 208 GY-TKSIDIWSVGCILAEMLSNR 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
HPN++++ LV++ M+ L F ++ L +KI + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTIGYMAP 413
LH + IVHRD+K N+LLD D+N K++DFG + +LD G+K + GT Y+AP
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAP 192
Query: 414 EYALW-------GYLTYKADVYSFGIVALEIVSG 440
E GY + D++S G++ +++G
Sbjct: 193 EIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAG 225
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 27 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 86
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 87 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FXEPHARF 140
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 141 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 193
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 19 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 78
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 79 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 132
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D +++DFG AK +G + +
Sbjct: 133 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXL 185
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + +E LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ +++DFGLAK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG-T 407
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++ A
Sbjct: 200 VAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQD 467
+ +MAPE T ++DV+SFG++ EI S S P ++ D + C ++
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCRRLKE 309
Query: 468 GKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
G + D Y E M + L C + PS RPT SE+
Sbjct: 310 GTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 344
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 53 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 166
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 167 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTL 219
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 202 GY-TKSIDIWSVGCILAEMLSNR 223
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FXEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG-T 407
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++ A
Sbjct: 207 VAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQD 467
+ +MAPE T ++DV+SFG++ EI S S P ++ D + C ++
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCRRLKE 316
Query: 468 GKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
G + D Y E M + L C + PS RPT SE+
Sbjct: 317 GTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 351
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAG-T 407
+A+G+ FL SR K +HRD+ A N+LL KI DFGLA+ D ++ A
Sbjct: 209 VAKGMEFL--ASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQQD 467
+ +MAPE T ++DV+SFG++ EI S S P ++ D + C ++
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--LGASPYPGVKID-----EEFCRRLKE 318
Query: 468 GKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
G + D Y E M + L C + PS RPT SE+
Sbjct: 319 GTRMRAPD------YTTPE---MYQTMLDCWHGEPSQRPTFSEL 353
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI FGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 202 GY-TKSIDIWSVGCILAEMLSNR 223
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FXEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 283 FLNEIAMISCLQHPNLVKIHGC----CVEGDQLLLVYEYMENNSLACALFGRENCELELD 338
F E + L HP +V ++ G +V EY++ +L R+ E
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL------RDIVHTEGP 112
Query: 339 W-PTRQ-KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DE 394
P R ++ + L F H+ I+HRD+K N+++ K+ DFG+A+ D
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 395 GDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
G+ + + GT Y++PE A + ++DVYS G V E+++G+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 241 NFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
++ K IG G FG VY+ +L D G ++A+K++ NRE + ++ L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIV 76
Query: 300 KI----HGCCVEGDQ--LLLVYEYMENNSLACAL-FGRENCELELDWPTRQKICLGIARG 352
++ + + D+ L LV +Y+ A + R L + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY--VKLYMYQLFRS 134
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAK---LDEGDKTHISTRIAGTI 408
LA++H F I HRDIK N+LLD D K+ DFG AK E + + I +R
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---- 187
Query: 409 GYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
Y APE ++G Y + DV+S G V E++ G+
Sbjct: 188 -YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGL 353
P L ++H C D+L V EY+ L + GR P IA GL
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR------FKEPHAVFYAAEIAIGL 455
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAP 413
FL + I++RD+K NV+LD + + KI+DFG+ K + D + GT Y+AP
Sbjct: 456 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAP 511
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGK 441
E + D ++FG++ E+++G+
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGL 353
P L ++H C D+L V EY+ L + GR P IA GL
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR------FKEPHAVFYAAEIAIGL 134
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAP 413
FL + I++RD+K NV+LD + + KI+DFG+ K + D + GT Y+AP
Sbjct: 135 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAP 190
Query: 414 EYALWGYLTYKADVYSFGIVALEIVSGK 441
E + D ++FG++ E+++G+
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 223 SDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGT-IIAVKQL--SSKSRQG 279
D+ T FT+ ++F+ + +G+G FG VY + I+A+K L S ++G
Sbjct: 13 PDILTRHFTI-------DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG 65
Query: 280 -NREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELD 338
+ EI + + L HPN+++++ + ++ L+ EY L L +++C D
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTF--D 121
Query: 339 WPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT 398
I +A L + H + K++HRDIK N+LL KI+DFG + +
Sbjct: 122 EQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR- 177
Query: 399 HISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
+ GT+ Y+ PE K D++ G++ E++ G
Sbjct: 178 --RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DF LA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 53 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FXEPHARF 166
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 167 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 219
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 242 FDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHPNL 298
+ K IG G G V G +AVK+LS +++ + E+ ++ C+ H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 299 VKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
+ + E + LV E M+ N C + E + + Q +C G
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLC-----G 138
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
+ LH I+HRD+K +N+++ D KI DFGLA+ + T T Y A
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRA 193
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSG 440
PE L D++S G + E+V G
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FAEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 40/229 (17%)
Query: 242 FDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLS---SKSRQGNREFLNEIAMISCLQ-HP 296
++ KK+G+G +G V+K G ++AVK++ S R F EI +++ L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHE 69
Query: 297 NLVKIHGCC-VEGDQ-LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
N+V + + D+ + LV++YME + A R N L+ +Q + + + +
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVI---RANI---LEPVHKQYVVYQLIKVIK 123
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---------------LDEG---- 395
+LH ++HRD+K +N+LL+ + + K++DFGL++ ++E
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 396 -DKTHISTRIAGTIGYMAPEYALWGYLTYKA--DVYSFGIVALEIVSGK 441
D I T T Y APE L G Y D++S G + EI+ GK
Sbjct: 181 DDDQPILTDYVATRWYRAPE-ILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI D GLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 283 FLNEIAMISCLQHPNLVKIHGC----CVEGDQLLLVYEYMENNSLACALFGRENCELELD 338
F E + L HP +V ++ G +V EY++ +L R+ E
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL------RDIVHTEGP 129
Query: 339 W-PTRQ-KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL--DE 394
P R ++ + L F H+ I+HRD+K N+++ K+ DFG+A+ D
Sbjct: 130 MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 395 GDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
G+ + + GT Y++PE A + ++DVYS G V E+++G+
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI D GLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 21 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 80
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 134
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 135 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGT 187
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A++++S Q + L EI ++ +H N++ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T T Y APE L
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 208 GY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 34/228 (14%)
Query: 246 KKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIH-- 302
K +G GG G V+ D +A+K++ Q + L EI +I L H N+VK+
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 303 ------------GCCVEGDQLLLVYEYMEN---NSLACALFGRENCELELDWPTRQKICL 347
G E + + +V EYME N L E+ L
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL---------FMY 127
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLD-RDLNPKISDFGLAKLDEGDKTHISTRIAG 406
+ RGL ++H + ++HRD+K N+ ++ DL KI DFGLA++ + +H G
Sbjct: 128 QLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 407 TIG--YMAPEYALWGYLTYKA-DVYSFGIVALEIVSGKNNMSYAPALE 451
+ Y +P L KA D+++ G + E+++GK + A LE
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE L D ++ G++ ++ +G
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI D GLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L W + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 248 IGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCV 306
+G G F V+ Q G + A+K + + NEIA++ ++H N+V +
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 307 EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA---FLHEESRFK 363
LV + + L F R LE T + L I + L+ +LHE
Sbjct: 77 STTHYYLVMQLVSGGEL----FDRI---LERGVYTEKDASLVIQQVLSAVKYLHENG--- 126
Query: 364 IVHRDIKATNVL-LDRDLNPKI--SDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
IVHRD+K N+L L + N KI +DFGL+K+++ I + GT GY+APE
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKP 183
Query: 421 LTYKADVYSFGIVALEIVSGKNNMSYAPALE 451
+ D +S G++ ++ G Y P E
Sbjct: 184 YSKAVDCWSIGVITYILLCG-----YPPFYE 209
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ K++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCEL----ELDWPTRQKI 345
+ ++H N++ + L E + L L G + + +L Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-HISTRI 404
I RGL ++H I+HRD+K +N+ ++ D KI DFGL + + + T +++TR
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR- 186
Query: 405 AGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
Y APE L W + D++S G + E+++G+
Sbjct: 187 ----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FXEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FXEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 248 IGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGNR------EFLNEIAMISCLQHPNLVK 300
+G G FG V G+ G +AVK L+ RQ R + EI + +HP+++K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ +V EY+ L + E E++ +++ I + + H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE-EME---ARRLFQQILSAVDYCH--- 128
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPEYALWG 419
R +VHRD+K NVLLD +N KI+DFGL+ + +G+ S G+ Y APE + G
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPE-VISG 184
Query: 420 --YLTYKADVYSFGIVALEIVSG 440
Y + D++S G++ ++ G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FXEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FXEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ K++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+++D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+APE + D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N ++ELD + +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T Y APE L
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 208 GY-TKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN-REFLNEIAMISCLQHPNLVKIHGCC 305
IGEG +G V + +A+K++S Q + L EI ++ +H N++ I+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL---GIARGLAFLHEESRF 362
+ Y+ + + L+ L+ + IC I RGL ++H +
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKL----LKTQHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 363 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAPEYAL--W 418
++HRD+K +N+LL+ + KI DFGLA++ + D H T Y APE L
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 419 GYLTYKADVYSFGIVALEIVSGK 441
GY T D++S G + E++S +
Sbjct: 209 GY-TKSIDIWSVGCILAEMLSNR 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 141
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 142 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 194
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N ++ELD + +
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQML 129
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 130 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 184
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
T + +++G+G F V + GQ II K+LS++ Q + E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRL 66
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L+HPN+V++H E L+++ + L + RE + + I +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE-------YYSEADASHCIQQI 119
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLN---PKISDFGLAKLDEGDKTHISTRIAGTIG 409
L + + +VHR++K N+LL L K++DFGLA EG++ AGT G
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPG 178
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y++PE D+++ G++ ++ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 246 KKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLV 299
+++G+G F V + GQ II K+LS++ Q + E + L+HPN+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIV 84
Query: 300 KIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
++H E L+++ + L + RE + + I + L +
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVARE-------YYSEADASHCIQQILEAVLHC 137
Query: 360 SRFKIVHRDIKATNVLLDRDLN---PKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYA 416
+ +VHRD+K N+LL L K++DFGLA EG++ AGT GY++PE
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVL 196
Query: 417 LWGYLTYKADVYSFGIVALEIVSG 440
D+++ G++ ++ G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGN----------- 280
+ ++ A + + + I G +G V G ++G +A+K++ + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 281 REFLNEIAMISCLQHPNLVKIHGCCVEGDQ-----LLLVYEYMENNSLACALFGRENCEL 335
+ L EI +++ HPN++ + V ++ L LV E M + LA + + +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVI---HDQRI 129
Query: 336 ELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEG 395
+ Q I GL LHE +VHRD+ N+LL + + I DF LA+ D
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 396 D--KTHISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
D KTH T Y APE + + T D++S G V E+ + K
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 138
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 139 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 192
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGN----------- 280
+ ++ A + + + I G +G V G ++G +A+K++ + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 281 REFLNEIAMISCLQHPNLVKIHGCCVEGDQ-----LLLVYEYMENNSLACALFGRENCEL 335
+ L EI +++ HPN++ + V ++ L LV E M + LA + + +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVI---HDQRI 129
Query: 336 ELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEG 395
+ Q I GL LHE +VHRD+ N+LL + + I DF LA+ D
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTA 186
Query: 396 D--KTHISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGK 441
D KTH T Y APE + + T D++S G V E+ + K
Sbjct: 187 DANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + ++ELD + +
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVI-----QMELDHERMSYLLYQML 174
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 175 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 229
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 137
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 138 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 137
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 138 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAM 289
K I + + +G G +G V G +AVK+LS +S + E+ +
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 290 ISCLQHPNLVKIHGCCV------EGDQLLLVYEYME---NNSLACALFGRENCELELDWP 340
+ ++H N++ + E + + LV M NN + C ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV------- 127
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKT-H 399
Q + I RGL ++H I+HRD+K +N+ ++ D KI DFGLA+ + + T +
Sbjct: 128 --QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 182
Query: 400 ISTRIAGTIGYMAPEYALWG-YLTYKADVYSFGIVALEIVSGK 441
++TR Y APE L + D++S G + E+++G+
Sbjct: 183 VATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT Y+AP L D ++ G++ E+ +G
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 60/215 (27%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA----DGTIIAVKQLSSKS--RQGN------------- 280
N + +IG+G +G V +LA D T A+K LS K RQ
Sbjct: 13 NQYTLKDEIGKGSYGVV---KLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 281 -----------REFLNEIAMISCLQHPNLVKIHGCCVEG--DQLLLVYEYMENNSLACAL 327
+ EIA++ L HPN+VK+ + D L +V+E + +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---- 125
Query: 328 FGRENCELELDWPTRQKICLGIAR--------GLAFLHEESRFKIVHRDIKATNVLLDRD 379
++ PT + + AR G+ +LH + KI+HRDIK +N+L+ D
Sbjct: 126 ---------MEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGED 173
Query: 380 LNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPE 414
+ KI+DFG++ +G +S + GT +MAPE
Sbjct: 174 GHIKIADFGVSNEFKGSDALLSNTV-GTPAFMAPE 207
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 138
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 139 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 192
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 130
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 131 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 184
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 190
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 28 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FXEPHARFYAA 141
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 142 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 194
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 131
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 132 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 228 ISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSS--KSRQGNREFL 284
IS + + ++ + ++G G +G V K + + G I+AVK++ + S++ R +
Sbjct: 39 ISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM 98
Query: 285 NEIAMISCLQHPNLVKIHGCCV-EGDQLLLVYEYMENNSLACALFGRENCELELDWPTR- 342
+ + + P V +G EGD V+ ME + F ++ + P
Sbjct: 99 DLDISMRTVDCPFTVTFYGALFREGD----VWICMELMDTSLDKFYKQVIDKGQTIPEDI 154
Query: 343 -QKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK--LDEGDKTH 399
KI + I + L LH S+ ++HRD+K +NVL++ K+ DFG++ +D KT
Sbjct: 155 LGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
Query: 400 ISTRIAGTIGYMAPEYA-----LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDC 454
AG YMAPE GY + K+D++S GI +E+ L F
Sbjct: 213 ----DAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELA----------ILRFPY 257
Query: 455 TCLLDWACHLQQDGKLVELVDERLGS-KYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
W QQ ++VE +L + K+ E + + C + RPT E+
Sbjct: 258 DS---WGTPFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPEL 308
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 131
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 132 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 248 IGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGNR------EFLNEIAMISCLQHPNLVK 300
+G G FG V G+ G +AVK L+ RQ R + EI + +HP+++K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 301 IHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEES 360
++ +V EY+ L + E E++ +++ I + + H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE-EME---ARRLFQQILSAVDYCH--- 128
Query: 361 RFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPEYALWG 419
R +VHRD+K NVLLD +N KI+DFGL+ + +G+ S G+ Y APE + G
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPE-VISG 184
Query: 420 --YLTYKADVYSFGIVALEIVSG 440
Y + D++S G++ ++ G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 246 KKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
K +GEG F K AVK +S + ++ + + + C HPN+VK+H
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKL--CEGHPNIVKLHEV 74
Query: 305 CVEGDQLLLVYEYMENNSLACALFGREN-CELELDWPTRQKICLGIARGLAFLHEESRFK 363
+ LV E + L + +++ E E + R+ + ++ +H+
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK-----LVSAVSHMHD---VG 126
Query: 364 IVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
+VHRD+K N+L + +L KI DFG A+L D + T T+ Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP-CFTLHYAAPELLNQNG 185
Query: 421 LTYKADVYSFGIVALEIVSGK 441
D++S G++ ++SG+
Sbjct: 186 YDESCDLWSLGVILYTMLSGQ 206
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 35 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY + L GR P +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FSEPHARFYAA 148
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ +++DFG AK +G + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY + L GR P +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ K++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + + G A+K L + ++ LNE +
Sbjct: 56 QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR------FSEPHARFYAA 169
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ +++DFG AK +G + + GT
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 222
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + ++ELD + +
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVI-----QMELDHERMSYLLYQML 174
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 175 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 229
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 237 AATNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
+ T+ + +++G+G F V + GQ II K+LS++ Q + E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
L+HPN+V++H E LV++ + L + RE + + I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-------YYSEADASHCIQ 110
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+ L ++ IVHRD+K N+LL + K++DFGLA +GD+ AGT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGT 169
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY++PE D+++ G++ ++ G
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSS--KSRQGNREFLNEIAMIS 291
++ ++ + ++G G +G V K + + G I+AVK++ + S++ R ++ +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 292 CLQHPNLVKIHGCCV-EGDQLLLVYEYMENNSLACALFGRENCELELDWP--TRQKICLG 348
+ P V +G EGD V+ ME + F ++ + P KI +
Sbjct: 62 TVDCPFTVTFYGALFREGD----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI-AGT 407
I + L LH S+ ++HRD+K +NVL++ K+ DFG++ D ++ I AG
Sbjct: 118 IVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGC 172
Query: 408 IGYMAPEYA-----LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWAC 462
YMAPE GY + K+D++S GI +E+ + +D W
Sbjct: 173 KPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILR--------FPYDS-----WGT 218
Query: 463 HLQQDGKLVELVDERL-GSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
QQ ++VE +L K+ E + + C + RPT E+
Sbjct: 219 PFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPEL 264
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN---REFLNEIAMISCL- 293
T F +KIG G FG V+K + DG I A+K+ S K G+ + L E+ + L
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 64
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
QH ++V+ E D +L+ EY SLA A+ + + L + RGL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK 397
++H S +VH DIK +N+ + R P A +EGD+
Sbjct: 125 RYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDE 159
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN---REFLNEIAMISCL- 293
T F +KIG G FG V+K + DG I A+K+ S K G+ + L E+ + L
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 68
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
QH ++V+ E D +L+ EY SLA A+ + + L + RGL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK 397
++H S +VH DIK +N+ + R P A +EGD+
Sbjct: 129 RYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDE 163
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN---REFLNEIAMISCL- 293
T F +KIG G FG V+K + DG I A+K+ S K G+ + L E+ + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
QH ++V+ E D +L+ EY SLA A+ + + L + RGL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK 397
++H S +VH DIK +N+ + R P A +EGD+
Sbjct: 127 RYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDE 161
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P L K+ + L +V EY + L GR P +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ K++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGN---REFLNEIAMISCL- 293
T F +KIG G FG V+K + DG I A+K+ S K G+ + L E+ + L
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGL 353
QH ++V+ E D +L+ EY SLA A+ + + L + RGL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 354 AFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK 397
++H S +VH DIK +N+ + R P A +EGD+
Sbjct: 127 RYIHSMS---LVHMDIKPSNIFISRTSIPN------AASEEGDE 161
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 237 AATNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
+ T+ + +++G+G F V + GQ II K+LS++ Q + E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 291 SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
L+HPN+V++H E LV++ + L + RE + + I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-------YYSEADASHCIQ 110
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+ L ++ IVHRD+K N+LL + K++DFGLA +GD+ AGT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGT 169
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GY++PE D+++ G++ ++ G
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P L K+ + L +V EY + L GR P +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ K++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + E + + Q +C
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 137
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 138 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + E + + Q +C
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 137
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 138 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + E + + Q +C
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 138
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 139 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 192
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVY-KGQLADGTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ K +G G FG V + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ + P L K+ + L +V EY + L GR P +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR------FXEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+++D+ K++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 231 TLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNE 286
T Q A + FD K +G G FG V + + G A+K L + ++ LNE
Sbjct: 32 TPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQK 344
++ + P LVK+ + L +V EY+ + L GR P +
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR------FSEPHARF 145
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I +LH +++RD+K N+L+D+ +++DFG AK +G + +
Sbjct: 146 YAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXL 198
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT +APE L D ++ G++ E+ +G
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQ-----LADGTIIAVKQLSSKSRQG--NREFLNEIAMISCLQ 294
+D +++G G F V K + L K+ S SR+G E E++++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
H N++ +H ++L+ E + L L +E+ E I G+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE----EATSFIKQILDGVN 129
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL---NPKISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH + KI H D+K N+ LLD+++ + K+ DFGLA ++++G + I GT
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + E + + Q +C
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 137
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 138 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
T+++ +++G+G F V + Q II K+LS++ Q + E +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRL 86
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L+HPN+V++H E LV++ + L + RE + + I +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-------YYSEADASHCIHQI 139
Query: 353 LAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
L ++ + IVHRD+K N+LL + K++DFGLA +G++ AGT G
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGFAGTPG 198
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y++PE D+++ G++ ++ G
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQ-----LADGTIIAVKQLSSKSRQG--NREFLNEIAMISCLQ 294
+D +++G G F V K + L K+ S SR+G E E++++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
H N++ +H ++L+ E + L L +E+ E I G+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE----EATSFIKQILDGVN 129
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL---NPKISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH + KI H D+K N+ LLD+++ + K+ DFGLA ++++G + I GT
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQ-----LADGTIIAVKQLSSKSRQG--NREFLNEIAMISCLQ 294
+D +++G G F V K + L K+ S SR+G E E++++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
H N++ +H ++L+ E + L L +E+ E I G+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE----EATSFIKQILDGVN 129
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL---NPKISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH + KI H D+K N+ LLD+++ + K+ DFGLA ++++G + I GT
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQ-----LADGTIIAVKQLSSKSRQG--NREFLNEIAMISCLQ 294
+D +++G G F V K + L K+ S SR+G E E++++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
H N++ +H ++L+ E + L L +E+ E I G+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE----EATSFIKQILDGVN 129
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL---NPKISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH + KI H D+K N+ LLD+++ + K+ DFGLA ++++G + I GT
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 242 FDSAKKIGEGGFGPVYKGQ-----LADGTIIAVKQLSSKSRQG--NREFLNEIAMISCLQ 294
+D +++G G F V K + L K+ S SR+G E E++++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLA 354
H N++ +H ++L+ E + L L +E+ E I G+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE----EATSFIKQILDGVN 129
Query: 355 FLHEESRFKIVHRDIKATNV-LLDRDL---NPKISDFGLA-KLDEGDKTHISTRIAGTIG 409
+LH + KI H D+K N+ LLD+++ + K+ DFGLA ++++G + I GT
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
++APE + L +AD++S G++ ++SG
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 247 KIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISC--LQHPNLVKIHG 303
++G G FG V++ + G AVK++ E +++C L P +V ++G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAEELMACAGLTSPRIVPLYG 152
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA-RGLAFLHEESRF 362
EG + + E +E SL L + C E R LG A GL +LH
Sbjct: 153 AVREGPWVNIFMELLEGGSLG-QLVKEQGCLPE----DRALYYLGQALEGLEYLHSR--- 204
Query: 363 KIVHRDIKATNVLLDRD-LNPKISDFGLAKLDEGDKTHIST----RIAGTIGYMAPEYAL 417
+I+H D+KA NVLL D + + DFG A + D S I GT +MAPE L
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 418 WGYLTYKADVYSFGIVALEIVSG 440
K DV+S + L +++G
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + E + + Q +C
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 139
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T Y
Sbjct: 140 -GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYY 193
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQGNREFLNEIAMISCLQHPNL 298
+K+G+G FG V +G+ +AVK L + +F+ E+ + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
++++G + + +V E SL L + L T + + +A G+ +L E
Sbjct: 78 IRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYL-E 132
Query: 359 ESRFKIVHRDIKATNVLL-DRDLNPKISDFGLAK-LDEGDKTHISTRIAGT-IGYMAPEY 415
RF +HRD+ A N+LL RDL KI DFGL + L + D ++ + APE
Sbjct: 133 SKRF--IHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
++ +D + FG+ E+ +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNREF---LNEIAM 289
Q A + F+ + +G G FG V + + G A+K L + ++ LNE +
Sbjct: 36 QNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICL 347
+ P LVK+ + L +V EY + L GR P +
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR------FSEPHARFYAA 149
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
I +LH +++RD+K N+L+D+ K++DFG AK +G + + GT
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGT 202
Query: 408 IGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y+APE L D ++ G++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQGNREFLNEIAMISCLQHPNL 298
+K+G+G FG V +G+ +AVK L + +F+ E+ + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
++++G V + +V E SL L + L T + + +A G+ +L E
Sbjct: 74 IRLYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYL-E 128
Query: 359 ESRFKIVHRDIKATNVLL-DRDLNPKISDFGLAK-LDEGDKTHISTRIAGT-IGYMAPEY 415
RF +HRD+ A N+LL RDL KI DFGL + L + D ++ + APE
Sbjct: 129 SKRF--IHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
++ +D + FG+ E+ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQGNREFLNEIAMISCLQHPNL 298
+K+G+G FG V +G+ +AVK L + +F+ E+ + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
++++G + + +V E SL L + L T + + +A G+ +L E
Sbjct: 78 IRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYL-E 132
Query: 359 ESRFKIVHRDIKATNVLL-DRDLNPKISDFGLAK-LDEGDKTHISTRIAGT-IGYMAPEY 415
RF +HRD+ A N+LL RDL KI DFGL + L + D ++ + APE
Sbjct: 133 SKRF--IHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
++ +D + FG+ E+ +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQGNREFLNEIAMISCLQHPNL 298
+K+G+G FG V +G+ +AVK L + +F+ E+ + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
++++G V + +V E SL L + L T + + +A G+ +L E
Sbjct: 74 IRLYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYL-E 128
Query: 359 ESRFKIVHRDIKATNVLL-DRDLNPKISDFGLAK-LDEGDKTHISTRIAGT-IGYMAPEY 415
RF +HRD+ A N+LL RDL KI DFGL + L + D ++ + APE
Sbjct: 129 SKRF--IHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
++ +D + FG+ E+ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + ++ELD + +
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVI-----QMELDHERMSYLLYQML 130
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 131 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQGNREFLNEIAMISCLQHPNL 298
+K+G+G FG V +G+ +AVK L + +F+ E+ + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
++++G + + +V E SL L + L T + + +A G+ +L E
Sbjct: 84 IRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYL-E 138
Query: 359 ESRFKIVHRDIKATNVLL-DRDLNPKISDFGLAK-LDEGDKTHISTRIAGT-IGYMAPEY 415
RF +HRD+ A N+LL RDL KI DFGL + L + D ++ + APE
Sbjct: 139 SKRF--IHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
++ +D + FG+ E+ +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + ++ELD + +
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVI-----QMELDHERMSYLLYQML 141
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 142 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 196
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 247 KIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISC--LQHPNLVKIHG 303
++G G FG V++ + G AVK++ E +++C L P +V ++G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAEELMACAGLTSPRIVPLYG 133
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA-RGLAFLHEESRF 362
EG + + E +E SL L + C E R LG A GL +LH
Sbjct: 134 AVREGPWVNIFMELLEGGSLG-QLVKEQGCLPE----DRALYYLGQALEGLEYLHSR--- 185
Query: 363 KIVHRDIKATNVLLDRD-LNPKISDFGLAKLDE----GDKTHISTRIAGTIGYMAPEYAL 417
+I+H D+KA NVLL D + + DFG A + G I GT +MAPE L
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 418 WGYLTYKADVYSFGIVALEIVSG 440
K DV+S + L +++G
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQGNREFLNEIAMISCLQHPNL 298
+K+G+G FG V +G+ +AVK L + +F+ E+ + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
++++G + + +V E SL L + L T + + +A G+ +L E
Sbjct: 84 IRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYL-E 138
Query: 359 ESRFKIVHRDIKATNVLL-DRDLNPKISDFGLAKLDEGDKTH--ISTRIAGTIGYMAPEY 415
RF +HRD+ A N+LL RDL KI DFGL + + H + + APE
Sbjct: 139 SKRF--IHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
++ +D + FG+ E+ +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 246 KKIGEGGFGPV--YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
+K+GEGGF V +G L DG A+K++ +Q E E M HPN++++
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 304 CCVE----GDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC---LGIARGLAFL 356
C+ + L+ + + +L + E + + ++ T +I LGI RGL +
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 357 HEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD----EGDKTHISTRIAG----TI 408
H + HRD+K TN+LL + P + D G EG + ++ + TI
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 409 GYMAPE-YALWGY--LTYKADVYSFGIVALEIVSGK 441
Y APE +++ + + + DV+S G V ++ G+
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 246 KKIGEGGFGPVYKGQL----ADGTIIAVKQLSS---KSRQGNREFLNEIAMISCLQHPNL 298
+K+G+G FG V +G+ +AVK L + +F+ E+ + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
++++G V + +V E SL L + L T + + +A G+ +L E
Sbjct: 74 IRLYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGYL-E 128
Query: 359 ESRFKIVHRDIKATNVLL-DRDLNPKISDFGLAKLDEGDKTH--ISTRIAGTIGYMAPEY 415
RF +HRD+ A N+LL RDL KI DFGL + + H + + APE
Sbjct: 129 SKRF--IHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 416 ALWGYLTYKADVYSFGIVALEIVS 439
++ +D + FG+ E+ +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 240 NNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLNEIA---------M 289
+D IG G V + A G AVK + + + + E L E+ +
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 290 ISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGI 349
HP+++ + + LV++ M L F ++ L + I +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETRSIMRSL 209
Query: 350 ARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAGTI 408
++FLH + IVHRD+K N+LLD ++ ++SDFG + L+ G+K + GT
Sbjct: 210 LEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTP 263
Query: 409 GYMAPEY-------ALWGYLTYKADVYSFGIVALEIVSG 440
GY+APE GY + D+++ G++ +++G
Sbjct: 264 GYLAPEILKCSMDETHPGY-GKEVDLWACGVILFTLLAG 301
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ 294
+ + F + G+G FG V G + + G +A+K++ R NRE L + ++ L
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLH 77
Query: 295 HPNLVKIHG---CCVEGDQ----LLLVYEYMENN-SLACALFGRENCELELDWPTRQKIC 346
HPN+V++ E D+ L +V EY+ + C + R P K+
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVA---PPPILIKVF 134
Query: 347 L-GIARGLAFLHEESRFKIVHRDIKATNVLLDR-DLNPKISDFGLAK---LDEGDKTHIS 401
L + R + LH S + HRDIK NVL++ D K+ DFG AK E + +I
Sbjct: 135 LFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 402 TRIAGTIGYMAPEYALWG-YLTYKADVYSFGIVALEIVSGK 441
+R Y APE + T D++S G + E++ G+
Sbjct: 194 SRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 15/192 (7%)
Query: 229 SFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIA 288
S L++ + + IG+G FG VY G+ I + + + + F E+
Sbjct: 22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVM 81
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
+H N+V G C+ L ++ + +L + + ++ LD ++I
Sbjct: 82 AYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQE 138
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPK--ISDFGLAKLD---EGDKTHISTR 403
I +G+ +LH + I+H+D+K+ NV D N K I+DFGL + + + R
Sbjct: 139 IVKGMGYLHAKG---ILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLR 192
Query: 404 IA-GTIGYMAPE 414
I G + ++APE
Sbjct: 193 IQNGWLCHLAPE 204
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 227 TISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNRE--F 283
++S + + + + K+GEG +G VYK +A+K++ + +
Sbjct: 21 SMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA 80
Query: 284 LNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
+ E++++ LQH N++++ +L L++EY EN+ + +N ++ + +
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND---LKKYMDKNPDVSMR--VIK 135
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNP--KISDFGLAKLDEGDKT 398
+ G+ F H + +HRD+K N+LL D P KI DFGLA+ G
Sbjct: 136 SFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA-FGIPI 191
Query: 399 HISTRIAGTIGYMAPEYALWG-YLTYKADVYSFGIVALEIV 438
T T+ Y PE L + + D++S + E++
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSKSRQGNREFLNEIAMISCL----Q 294
+F ++G G +G V+K + DG + AVK+ S R G ++ ++A + Q
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQ 115
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLA--CALFGRENCELELDWPTRQKICLGIARG 352
HP V++ EG L L E + SL C +G E ++ W + L
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQV-WGYLRDTLLA---- 169
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
LA LH + +VH D+K N+ L K+ DFGL L E G YMA
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 413 PEYALWGYLTYKADVYSFGIVALEIV 438
PE L G ADV+S G+ LE+
Sbjct: 225 PEL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 13/208 (6%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQH 295
++ + IG+G F V + GQ I+ V + +S + E ++ L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P++V++ L +V+E+M+ L + R + I L +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNP---KISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
H+ + I+HRD+K VLL N K+ FG+A + G+ ++ GT +MA
Sbjct: 146 CHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPHFMA 201
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSG 440
PE DV+ G++ ++SG
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N C + E + + Q +C
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLC---- 137
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 138 -GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 13/208 (6%)
Query: 242 FDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQH 295
++ + IG+G F V + GQ I+ V + +S + E ++ L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
P++V++ L +V+E+M+ L + R + I L +
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNP---KISDFGLAKLDEGDKTHISTRIAGTIGYMA 412
H+ + I+HRD+K VLL N K+ FG+A + G+ ++ GT +MA
Sbjct: 148 CHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPHFMA 203
Query: 413 PEYALWGYLTYKADVYSFGIVALEIVSG 440
PE DV+ G++ ++SG
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N ++ELD + +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVI-----QMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ G + + T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMEPEVV-TRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 247 KIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G G FG V++ + G AVK++ + + + E+ + L P +V ++G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 119
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA-RGLAFLHEESRFKI 364
EG + + E +E SL L + C E R LG A GL +LH +I
Sbjct: 120 REGPWVNIFMELLEGGSLG-QLIKQMGCLPE----DRALYYLGQALEGLEYLHTR---RI 171
Query: 365 VHRDIKATNVLLDRD-LNPKISDFGLAKLDEGDKTHIST----RIAGTIGYMAPEYALWG 419
+H D+KA NVLL D + DFG A + D S I GT +MAPE +
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 420 YLTYKADVYSFGIVALEIVSG 440
K D++S + L +++G
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNG 252
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHI---STRIA 405
+ARG+ FL S K +HRD+ A N+LL + KI DFGLA+ + ++ TR+
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWACHLQ 465
+ +MAPE + K+DV+S+G++ EI S S P ++ D D+ L+
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG--SPYPGVQMD----EDFCSRLR 316
Query: 466 QDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
+ ++ +Y E + ++ L C + P RP +E+
Sbjct: 317 EGMRM-------RAPEYSTPE---IYQIMLDCWHRDPKERPRFAEL 352
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 237 AATNNFDSAKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQH 295
A ++ F+ ++G G VY+ Q A+K L K + EI ++ L H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSH 107
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGR---ENCELELDWPTRQKICLGIARG 352
PN++K+ ++ LV E + LF R + E D K I
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGE----LFDRIVEKGYYSERDAADAVK---QILEA 160
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDR---DLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
+A+LHE IVHRD+K N+L D KI+DFGL+K+ E + + GT G
Sbjct: 161 VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE--HQVLMKTVCGTPG 215
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y APE + D++S GI+ ++ G
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 240 NNFD--SAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSR-QGNR-EFLNEIAMISCLQ 294
NNF ++K++G G F V + + G A K L + R Q R E L+EIA++ +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 295 H-PNLVKIHGCCVEGDQLLLVYEYM---ENNSLACALFGRENCELELDWPTRQKICLGIA 350
P ++ +H +++L+ EY E SL E ++ +Q I
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ-----IL 141
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNP----KISDFGLAKLDEGDKTHISTRIAG 406
G+ +LH+ + IVH D+K N+LL + P KI DFG+++ G + I G
Sbjct: 142 EGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR-KIGHACELR-EIMG 195
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVA 434
T Y+APE + +T D+++ GI+A
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIA 223
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 247 KIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G G FG V++ + G AVK++ + + + E+ + L P +V ++G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 135
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA-RGLAFLHEESRFKI 364
EG + + E +E SL L + C E R LG A GL +LH +I
Sbjct: 136 REGPWVNIFMELLEGGSLG-QLIKQMGCLPE----DRALYYLGQALEGLEYLHTR---RI 187
Query: 365 VHRDIKATNVLLDRD-LNPKISDFGLAKLDEGDKTHIST----RIAGTIGYMAPEYALWG 419
+H D+KA NVLL D + DFG A + D S I GT +MAPE +
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 420 YLTYKADVYSFGIVALEIVSG 440
K D++S + L +++G
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNG 268
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 239 TNNFDSAKKIGEGGFGP--VYKGQLADGTIIAVKQL---SSKSRQGNREFLNEIAMISCL 293
++ +D K IG G FG + + +L ++AVK + ++ RE +N L
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYIERGAAIDENVQREIINH----RSL 73
Query: 294 QHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALF--GRENCELELDWPTRQKICLGIAR 351
+HPN+V+ + L ++ EY L + GR + E E + +Q +
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFS-EDEARFFFQQ-----LLS 127
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDRDLNP--KISDFGLAKLDEGDKTHISTRIAGTIG 409
G+++ H +I HRD+K N LLD P KI DFG +K ST GT
Sbjct: 128 GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPA 182
Query: 410 YMAPEYAL-WGYLTYKADVYSFGIVALEIVSG 440
Y+APE L Y ADV+S G+ ++ G
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 52/244 (21%)
Query: 235 IKAATNNFDSAKKIGEGGFGPVY----KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMI 290
+ +N F KIGEG F VY + Q+ IA+K L S + A +
Sbjct: 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP-----IRIAAEL 70
Query: 291 SCLQ----HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
CL N++ + C + D +++ Y+E+ S L L + ++
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-------LSFQEVREYM 123
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHISTRI- 404
L + + L +H+ F IVHRD+K +N L +R L + DFGLA+ K + +
Sbjct: 124 LNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ 180
Query: 405 --------------------------AGTIGYMAPEY-ALWGYLTYKADVYSFGIVALEI 437
AGT G+ APE T D++S G++ L +
Sbjct: 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240
Query: 438 VSGK 441
+SG+
Sbjct: 241 LSGR 244
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 15/199 (7%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSK--SRQGNREFLNEIAMISCLQHPNLVKIHGC 304
K+ E G ++KG+ G I VK L + S + +R+F E + HPN++ + G
Sbjct: 17 KLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 305 C--VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
C L+ +M SL L E +D K L +ARG+AFLH
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVL--HEGTNFVVDQSQAVKFALDMARGMAFLHTLEPL 133
Query: 363 KIVHRDIKATNVLLDRDLNPKIS--DFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
I + + +V++D D+ +IS D + G + + +A PE
Sbjct: 134 -IPRHALNSRSVMIDEDMTARISMADVKFSFQSPG-RMYAPAWVAPEALQKKPE----DT 187
Query: 421 LTYKADVYSFGIVALEIVS 439
AD++SF ++ E+V+
Sbjct: 188 NRRSADMWSFAVLLWELVT 206
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + LV E M+ N ++ELD + +
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV-------IQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 247 KIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
++G G FG V++ + G AVK++ + + + E+ + L P +V ++G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 133
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA-RGLAFLHEESRFKI 364
EG + + E +E SL L + C E R LG A GL +LH +I
Sbjct: 134 REGPWVNIFMELLEGGSLG-QLIKQMGCLPE----DRALYYLGQALEGLEYLHTR---RI 185
Query: 365 VHRDIKATNVLLDRD-LNPKISDFGLAKLDEGDKTHIST----RIAGTIGYMAPEYALWG 419
+H D+KA NVLL D + DFG A + D S I GT +MAPE +
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 420 YLTYKADVYSFGIVALEIVSG 440
K D++S + L +++G
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNG 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 239 TNNFDSAKKIGEGGFGPVYK------GQLADGTIIAVKQLSSKSRQGNREFLNEIAMISC 292
T+ + + IG+G F V + G II K+LS++ Q + E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ---KLEREARICRL 59
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
L+H N+V++H E LV++ + L + RE + + I +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-------YYSEADASHCIQQI 112
Query: 353 LAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAKLDEGDKTHISTRIAGTIG 409
L + + +VHRD+K N+LL + K++DFGLA +GD+ AGT G
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPG 171
Query: 410 YMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
Y++PE D+++ G++ ++ G
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ C+ H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N C + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVI-----QMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ G + + T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMEPEVV-TRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSGK 441
APE L D++S G + E+V K
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 26/227 (11%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQL--SSKSRQGNRE 282
Q ++ T +++A + + +G G +G V G +A+K+L +S +
Sbjct: 14 QEVTKTAWEVRAVYRDL---QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 70
Query: 283 FLNEIAMISCLQHPNLVKIHGCCVEGDQL------LLVYEYMENNSLACALFGRENCELE 336
E+ ++ ++H N++ + + L LV +M + G+ +
Sbjct: 71 AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD------LGKLMKHEK 124
Query: 337 LDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGD 396
L Q + + +GL ++H I+HRD+K N+ ++ D KI DFGLA+ + D
Sbjct: 125 LGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR--QAD 179
Query: 397 KTHISTRIAGTIGYMAPEYAL-WGYLTYKADVYSFGIVALEIVSGKN 442
+ T Y APE L W T D++S G + E+++GK
Sbjct: 180 SEMXGXVV--TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKGQLADGT-------IIAVKQLSSKSRQGNREFLN--- 285
KA + + +K +G G G V K T II+ ++ + S + LN
Sbjct: 145 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET 203
Query: 286 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKI 345
EI ++ L HP ++KI + + +V E ME L + G + L T +
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLY 258
Query: 346 CLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHIST 402
+ + +LHE I+HRD+K NVLL + D KI+DFG +K+ +T +
Sbjct: 259 FYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMR 313
Query: 403 RIAGTIGYMAPEYAL----WGYLTYKADVYSFGIVALEIVSG 440
+ GT Y+APE + GY D +S G++ +SG
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 27/221 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPV---YKGQLADGT---IIAVKQLSSKSRQGNREFLN---E 286
KA + + +K +G G G V ++ + II+ ++ + S + LN E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
I ++ L HP ++KI + + +V E ME L + G + L T +
Sbjct: 191 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYF 245
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTR 403
+ + +LHE I+HRD+K NVLL + D KI+DFG +K+ +T +
Sbjct: 246 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 300
Query: 404 IAGTIGYMAPEYAL----WGYLTYKADVYSFGIVALEIVSG 440
+ GT Y+APE + GY D +S G++ +SG
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 340
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 239 TNNFDSAKKIGEGGFG--PVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHP 296
++ ++ K IG G FG + + + A+ ++AVK + + + + EI L+HP
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQAN-ELVAVKYIE-RGEKIDENVKREIINHRSLRHP 75
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLA 354
N+V+ + L +V EY L + GR E E + +Q I G++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLIS-----GVS 129
Query: 355 FLHEESRFKIVHRDIKATNVLLDRDLNP--KISDFGLAKLDEGDKTHISTRIA-GTIGYM 411
+ H ++ HRD+K N LLD P KI+DFG +K H + A GT Y+
Sbjct: 130 YAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYI 183
Query: 412 APEYALWG-YLTYKADVYSFGIVALEIVSG 440
APE L Y ADV+S G+ ++ G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSK------SRQGNREF--LNE 286
KA + + +K +G G G V + +A+K +S + +R+ + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
I ++ L HP ++KI + + +V E ME L + G + L T +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYF 120
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTR 403
+ + +LHE I+HRD+K NVLL + D KI+DFG +K+ +T +
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 175
Query: 404 IAGTIGYMAPEYAL----WGYLTYKADVYSFGIVALEIVSG 440
+ GT Y+APE + GY D +S G++ +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 215
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 242 FDSAKKIGEGGFGPV---YKGQLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHP 296
+ + K IG G G V Y L +A+K+LS +++ + E+ ++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 297 NLVKI------HGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ + E + +V E M+ N + ++ELD + +
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANL-------SQVIQMELDHERMSYLLYQML 136
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGTIGY 410
G+ LH I+HRD+K +N+++ D KI DFGLA+ + + T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 411 MAPEYALWGYLTYKADVYSFGIVALEIVSG 440
APE L D++S G + E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSK------SRQGNREF--LNE 286
KA + + +K +G G G V + +A+K +S + +R+ + E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
I ++ L HP ++KI + + +V E ME L + G + L T +
Sbjct: 65 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYF 119
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTR 403
+ + +LHE I+HRD+K NVLL + D KI+DFG +K+ +T +
Sbjct: 120 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 174
Query: 404 IAGTIGYMAPEYAL----WGYLTYKADVYSFGIVALEIVSG 440
+ GT Y+APE + GY D +S G++ +SG
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 19/228 (8%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSK----SRQGNREFLNEI 287
++ ++ +++ K IG G FG V + + +L SK R + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
+++ P +V++ + L +V EYM L + N ++ W +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--RFYTA 180
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAG 406
+ L +H +HRD+K N+LLD+ + K++DFG K+++ T + G
Sbjct: 181 EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 407 TIGYMAPEYALW----GYLTYKADVYSFGIVALEIVSGKNNMSYAPAL 450
T Y++PE GY + D +S G+ E++ G YA +L
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSL 283
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSK------SRQGNREF--LNE 286
KA + + +K +G G G V + +A+K +S + +R+ + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
I ++ L HP ++KI + + +V E ME L + G + L T +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYF 120
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTR 403
+ + +LHE I+HRD+K NVLL + D KI+DFG +K+ +T +
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 175
Query: 404 IAGTIGYMAPEYAL----WGYLTYKADVYSFGIVALEIVSG 440
+ GT Y+APE + GY D +S G++ +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSK----SRQGNREFLNEI 287
++ ++ +++ K IG G FG V + + +L SK R + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
+++ P +V++ + L +V EYM L + N ++ W +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--RFYTA 180
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAG 406
+ L +H +HRD+K N+LLD+ + K++DFG K+++ T + G
Sbjct: 181 EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 407 TIGYMAPEYALW----GYLTYKADVYSFGIVALEIVSG 440
T Y++PE GY + D +S G+ E++ G
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSK----SRQGNREFLNEI 287
++ ++ +++ K IG G FG V + + +L SK R + F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
+++ P +V++ + L +V EYM L + N ++ W +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--RFYTA 175
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA-KLDEGDKTHISTRIAG 406
+ L +H +HRD+K N+LLD+ + K++DFG K+++ T + G
Sbjct: 176 EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 231
Query: 407 TIGYMAPEYALW----GYLTYKADVYSFGIVALEIVSG 440
T Y++PE GY + D +S G+ E++ G
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSK------SRQGNREF--LNE 286
KA + + +K +G G G V + +A+K +S + +R+ + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
I ++ L HP ++KI + + +V E ME L + G + L T +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYF 120
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTR 403
+ + +LHE I+HRD+K NVLL + D KI+DFG +K+ +T +
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 175
Query: 404 IAGTIGYMAPEYAL----WGYLTYKADVYSFGIVALEIVSG 440
+ GT Y+APE + GY D +S G++ +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 27/221 (12%)
Query: 236 KAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSK------SRQGNREF--LNE 286
KA + + +K +G G G V + +A+K +S + +R+ + E
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 287 IAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKIC 346
I ++ L HP ++KI + + +V E ME L + G + L T +
Sbjct: 72 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYF 126
Query: 347 LGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLDEGDKTHISTR 403
+ + +LHE I+HRD+K NVLL + D KI+DFG +K+ +T +
Sbjct: 127 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT 181
Query: 404 IAGTIGYMAPEYAL----WGYLTYKADVYSFGIVALEIVSG 440
+ GT Y+APE + GY D +S G++ +SG
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGY-NRAVDCWSLGVILFICLSG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 268 AVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL 327
AVK + R + E EI ++ QHPN++ + +G + LV E M L
Sbjct: 56 AVKVIDKSKRDPSEEI--EI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---- 108
Query: 328 FGRENCELELDWPTRQK---------ICLGIARGLAFLHEESRFKIVHRDIKATNVL-LD 377
LD RQK + I + + +LH + +VHRD+K +N+L +D
Sbjct: 109 ---------LDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVD 156
Query: 378 RDLNP---KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVA 434
NP +I DFG AK + + T T ++APE D++S GI+
Sbjct: 157 ESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 435 LEIVSGKNNMSYAPA 449
+++G + P+
Sbjct: 216 YTMLAGYTPFANGPS 230
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 239 TNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPN 297
++ ++ K IG G FG ++AVK + + + + EI L+HPN
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 75
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V+ + L +V EY L + GR + E E + +Q I G+++
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-----GVSY 129
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNP--KISDFGLAKLDEGDKTHISTRIAGTIGYMAP 413
H ++ HRD+K N LLD P KI DFG +K ST GT Y+AP
Sbjct: 130 CHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAP 184
Query: 414 EYALWG-YLTYKADVYSFGIVALEIVSG 440
E L Y ADV+S G+ ++ G
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
Query: 239 TNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQG---NREFLNEIAMISCLQ 294
++ ++ K IG G FG ++AVK + + RE +N L+
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH----RSLR 73
Query: 295 HPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARG 352
HPN+V+ + L +V EY L + GR + E E + +Q I G
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-----G 127
Query: 353 LAFLHEESRFKIVHRDIKATNVLLDRDLNP--KISDFGLAKLDEGDKTHISTRIAGTIGY 410
+++ H ++ HRD+K N LLD P KI DFG +K ST GT Y
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAY 182
Query: 411 MAPEYALWG-YLTYKADVYSFGIVALEIVSG 440
+APE L Y ADV+S G+ ++ G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 268 AVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL 327
AVK + R + E EI ++ QHPN++ + +G + LV E M L
Sbjct: 56 AVKVIDKSKRDPSEEI--EI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---- 108
Query: 328 FGRENCELELDWPTRQK---------ICLGIARGLAFLHEESRFKIVHRDIKATNVL-LD 377
LD RQK + I + + +LH + +VHRD+K +N+L +D
Sbjct: 109 ---------LDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVD 156
Query: 378 RDLNP---KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVA 434
NP +I DFG AK + + T T ++APE D++S GI+
Sbjct: 157 ESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 435 LEIVSGKNNMSYAPA 449
+++G + P+
Sbjct: 216 YTMLAGYTPFANGPS 230
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL---DEGDKTHIS 401
I + IA + FLH + ++HRD+K +N+ D K+ DFGL DE ++T ++
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 402 TRIA--------GTIGYMAPEYALWGYLTYKADVYSFGIVALEIV 438
A GT YM+PE ++K D++S G++ E++
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 241 NFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNRE-FLNEIAMISCLQHPNL 298
+F+ + +G GGFG V++ + D A+K++ +R+ RE + E+ ++ L+HP +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 299 VKIHGCCVE 307
V+ +E
Sbjct: 67 VRYFNAWLE 75
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 286 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKI 345
EIA++S ++H N++K+ LV ME + LF + LD P I
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLV---MEKHGSGLDLFAFIDRHPRLDEPLASYI 135
Query: 346 CLGIARGLAFLHEESRFK-IVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
+ + +L R K I+HRDIK N+++ D K+ DFG A E K +
Sbjct: 136 FRQLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--F 189
Query: 405 AGTIGYMAPEYALWG-YLTYKADVYSFGIVALEIVSGKN 442
GTI Y APE + Y + +++S G+ +V +N
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN 228
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 33/285 (11%)
Query: 226 QTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLAD-GTIIAVKQLSSKSRQGNRE-- 282
+ I LK+++ ++F+ K IG G F V ++ G + A+K ++ E
Sbjct: 47 EPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVS 106
Query: 283 -FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDW 339
F E ++ + ++H + + L LV EY L L FG E E+
Sbjct: 107 CFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMAR 165
Query: 340 PTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH 399
+I + I R VHRDIK N+LLDR + +++DFG D T
Sbjct: 166 FYLAEIVMAI-------DSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 400 ISTRIAGTIGYMAPE-------YALWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF 452
S GT Y++PE G + D ++ G+ A E+ G+ YA +
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF-YADSTAE 277
Query: 453 DCTCLLDWACHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLC 497
++ + HL + LVDE + EEA I+ LLC
Sbjct: 278 TYGKIVHYKEHLS-----LPLVDEGV-----PEEARDFIQ-RLLC 311
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 239 TNNFDSAKKIGEGGFGPVYKGQLADGTII--AVKQLSSKSRQGNREFLNEIAMISCLQHP 296
T+ ++ + IG G + V K + T + AVK + R E EI ++ QHP
Sbjct: 21 TDGYEVKEDIGVGSYS-VCKRCIHKATNMEFAVKIIDKSKRDPTEEI--EI-LLRYGQHP 76
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK---------ICL 347
N++ + +G + +V E M+ L LD RQK +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGEL-------------LDKILRQKFFSEREASAVLF 123
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVL-LDRDLNP---KISDFGLAKLDEGDKTHISTR 403
I + + +LH + +VHRD+K +N+L +D NP +I DFG AK + + T
Sbjct: 124 TITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 404 IAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAP 448
T ++APE D++S G++ +++G + P
Sbjct: 181 CY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 234 QIKAATNNFDSAKKIGEGGFGPVYKGQ-LADGTIIAVKQL-SSKSRQGNREFLNEIAM-- 289
++KA ++ + ++G G +G V K + + G I AVK++ ++ + Q + L ++ +
Sbjct: 30 EVKA--DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISX 87
Query: 290 --ISCLQHPNLVKIHGCCV-EGDQLLLVYEYMENNSLACALFGRENCELELDWPTR--QK 344
+ C P V +G EGD V+ E + F ++ + P K
Sbjct: 88 RTVDC---PFTVTFYGALFREGD----VWICXELXDTSLDKFYKQVIDKGQTIPEDILGK 140
Query: 345 ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRI 404
I + I + L LH S+ ++HRD+K +NVL++ K DFG++ D ++ I
Sbjct: 141 IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKDI 195
Query: 405 -AGTIGYMAPEYA-----LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLL 458
AG Y APE GY + K+D++S GI +E+ + +D
Sbjct: 196 DAGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILR--------FPYDS---- 242
Query: 459 DWACHLQQDGKLVELVDERLGS-KYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
W QQ ++VE +L + K+ E + + C + RPT E+
Sbjct: 243 -WGTPFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPEL 291
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 28/193 (14%)
Query: 286 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNS---LACALFGRENCELELDWPTR 342
E+ + HPN+V + ++L +V +M S L C F EL + +
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY--- 132
Query: 343 QKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF--GLAKLDEGDKTHI 400
I G+ + L ++H VHR +KA+++L+ D +S L+ + G + +
Sbjct: 133 --ILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 187
Query: 401 STRI----AGTIGYMAPEYA---LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF- 452
+ +++PE L GY K+D+YS GI A E+ +G PA +
Sbjct: 188 VHDFPKYSVKVLPWLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQML 246
Query: 453 ------DCTCLLD 459
CLLD
Sbjct: 247 LEKLNGTVPCLLD 259
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 28/193 (14%)
Query: 286 EIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNS---LACALFGRENCELELDWPTR 342
E+ + HPN+V + ++L +V +M S L C F EL + +
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY--- 116
Query: 343 QKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF--GLAKLDEGDKTHI 400
I G+ + L ++H VHR +KA+++L+ D +S L+ + G + +
Sbjct: 117 --ILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 171
Query: 401 STRI----AGTIGYMAPEYA---LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEF- 452
+ +++PE L GY K+D+YS GI A E+ +G PA +
Sbjct: 172 VHDFPKYSVKVLPWLSPEVLQQNLQGY-DAKSDIYSVGITACELANGHVPFKDMPATQML 230
Query: 453 ------DCTCLLD 459
CLLD
Sbjct: 231 LEKLNGTVPCLLD 243
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTI-IAVKQLSSKSRQ--GNREFLNEIA 288
+K +K +N++ IG G +G VY + +A+K+++ + L EI
Sbjct: 21 IKNVKVP-DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT 79
Query: 289 MISCLQHPNLVKIHGCCV-----EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQ 343
+++ L+ ++++H + + D+L +V E +++ LF + L +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSD--LKKLFK---TPIFLTEQHVK 134
Query: 344 KICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDK 397
I + G F+HE I+HRD+K N LL++D + KI DFGLA+ DK
Sbjct: 135 TILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 246 KKIGEGGFGPVYKGQ-LADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ-HPNLVKIHG 303
+ + EGGF VY+ Q + G A+K+L S + NR + E+ + L HPN+V+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 304 CCVEGDQ--------LLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
G + LL+ E + + + L T KI R +
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVE--FLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 390
+H + + I+HRD+K N+LL K+ DFG A
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 21/155 (13%)
Query: 293 LQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG 352
LQ P++V IH QL + + LA L R++ L R
Sbjct: 91 LQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXL--------------RRQGPLAPPRA 136
Query: 353 LAFLHE-------ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIA 405
+A + + HRD+K N+L+ D + DFG+A +K
Sbjct: 137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV 196
Query: 406 GTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
GT+ Y APE + TY+AD+Y+ V E ++G
Sbjct: 197 GTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 26/190 (13%)
Query: 268 AVKQLSSKSRQGNREFLNEIAMI-SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACA 326
AVK + + E+ M+ C H N++++ E D+ LV+E M S+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 327 LFGRENC-ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR--DLNP- 382
+ R + ELE + +A L FLH + I HRD+K N+L + ++P
Sbjct: 102 IHKRRHFNELEAS-----VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPV 153
Query: 383 KISDFGLA---KLDEGDKTHIST----RIAGTIGYMAPEYA-----LWGYLTYKADVYSF 430
KI DFGL KL+ GD + IST G+ YMAPE + D++S
Sbjct: 154 KICDFGLGSGIKLN-GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 431 GIVALEIVSG 440
G++ ++SG
Sbjct: 213 GVILYILLSG 222
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 48/244 (19%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMI- 290
+K+++ +F+ K IG G FG V AV ++ + R + LN+ M+
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEV-----------AVVKMKNTERIYAMKILNKWEMLK 114
Query: 291 ----SCLQHPNLVKIHGCCV----------EGDQLLLVYEYMENNSLACALFGRENCELE 336
+C + V ++G C + + L LV +Y L L E+
Sbjct: 115 RAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED---- 170
Query: 337 LDWPTRQKICLGIAR---GLAFLHEES--RFKIVHRDIKATNVLLDRDLNPKISDFGLAK 391
K+ +AR G L +S + VHRDIK NVLLD + + +++DFG
Sbjct: 171 -------KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCL 223
Query: 392 LDEGDKTHISTRIAGTIGYMAPEYAL-----WGYLTYKADVYSFGIVALEIVSGKNNMSY 446
D T S+ GT Y++PE G + D +S G+ E++ G+ Y
Sbjct: 224 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF-Y 282
Query: 447 APAL 450
A +L
Sbjct: 283 AESL 286
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 48/244 (19%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMI- 290
+K+++ +F+ K IG G FG V AV ++ + R + LN+ M+
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEV-----------AVVKMKNTERIYAMKILNKWEMLK 130
Query: 291 ----SCLQHPNLVKIHGCCV----------EGDQLLLVYEYMENNSLACALFGRENCELE 336
+C + V ++G C + + L LV +Y L L E+
Sbjct: 131 RAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED---- 186
Query: 337 LDWPTRQKICLGIAR---GLAFLHEES--RFKIVHRDIKATNVLLDRDLNPKISDFGLAK 391
K+ +AR G L +S + VHRDIK NVLLD + + +++DFG
Sbjct: 187 -------KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCL 239
Query: 392 LDEGDKTHISTRIAGTIGYMAPEYAL-----WGYLTYKADVYSFGIVALEIVSGKNNMSY 446
D T S+ GT Y++PE G + D +S G+ E++ G+ Y
Sbjct: 240 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF-Y 298
Query: 447 APAL 450
A +L
Sbjct: 299 AESL 302
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSK--SRQGNREFLNEIAMISCLQHP 296
+ ++ + IG G +G V + G +A+K++ + + L E+ ++ +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 297 NLVKIHGCCV------EGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIA 350
N++ I E + +V + ME++ L + + LE + +
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESD-LHQIIHSSQPLTLE----HVRYFLYQLL 168
Query: 351 RGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIAGT 407
RGL ++H +++HRD+K +N+L++ + KI DFG+A+ + + T T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 408 IGYMAPEYALWGY-LTYKADVYSFGIVALEIVSGKN 442
Y APE L + T D++S G + E+++ +
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKGQLA-DGTIIAVKQLSSK--SRQGNREFLNEIAMISCLQHP 296
+ ++ + IG G +G V + G +A+K++ + + L E+ ++ +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 297 NLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL--------G 348
N++ I D L Y E S+ L E+ +L + Q + L
Sbjct: 115 NIIAIK------DILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQ 167
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK---LDEGDKTHISTRIA 405
+ RGL ++H +++HRD+K +N+L++ + KI DFG+A+ + + T
Sbjct: 168 LLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 406 GTIGYMAPEYALWGY-LTYKADVYSFGIVALEIVSGKN 442
T Y APE L + T D++S G + E+++ +
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 239 TNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPN 297
++ ++ K IG G FG ++AVK + + + + EI L+HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V+ + L +V EY L + GR + E E + +Q I G+++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-----GVSY 130
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNP--KISDFGLAKLDEGDKTHISTRIAGTIGYMAP 413
H ++ HRD+K N LLD P KI FG +K ST GT Y+AP
Sbjct: 131 CHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAP 185
Query: 414 EYALWG-YLTYKADVYSFGIVALEIVSG 440
E L Y ADV+S G+ ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 248 IGEGGFGPVYKGQLADGTII--AVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
IG G +G V K + GT I A K++ + F EI ++ L HPN+++++
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
+ + LV E LF R + +I + +A+ H + +
Sbjct: 93 EDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVA 145
Query: 366 HRDIKATNVLL--DRDLNP-KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
HRD+K N L D +P K+ DFGLA + K + T++ GT Y++P+ L G
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQ-VLEGLYG 202
Query: 423 YKADVYSFGIVALEIVSG 440
+ D +S G++ ++ G
Sbjct: 203 PECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 248 IGEGGFGPVYKGQLADGTII--AVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHGCC 305
IG G +G V K + GT I A K++ + F EI ++ L HPN+++++
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
+ + LV E LF R + +I + +A+ H + +
Sbjct: 76 EDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVA 128
Query: 366 HRDIKATNVLL--DRDLNP-KISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYLT 422
HRD+K N L D +P K+ DFGLA + K + T++ GT Y++P+ L G
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTPYYVSPQ-VLEGLYG 185
Query: 423 YKADVYSFGIVALEIVSG 440
+ D +S G++ ++ G
Sbjct: 186 PECDEWSAGVMMYVLLCG 203
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 244 SAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREF----LNEIAMIS-CLQHPNL 298
S K +G G G V G +AVK++ +F L EI +++ HPN+
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNV 89
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGR----ENCELELDWPTRQKICLGIARGLA 354
++ + C D+ L + + N +L + + EN +L+ ++ + IA G+A
Sbjct: 90 IRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLRQIASGVA 147
Query: 355 FLHEESRFKIVHRDIKATNVLLD-------------RDLNPKISDFGL-AKLDEGDKTHI 400
LH KI+HRD+K N+L+ +L ISDFGL KLD G
Sbjct: 148 HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 401 S--TRIAGTIGYMAPEY---ALWGYLTYKADVYSFGIVALEIVS 439
+GT G+ APE + LT D++S G V I+S
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 244 SAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREF----LNEIAMIS-CLQHPNL 298
S K +G G G V G +AVK++ +F L EI +++ HPN+
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNV 89
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGR----ENCELELDWPTRQKICLGIARGLA 354
++ + C D+ L + + N +L + + EN +L+ ++ + IA G+A
Sbjct: 90 IRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLRQIASGVA 147
Query: 355 FLHEESRFKIVHRDIKATNVLLD-------------RDLNPKISDFGL-AKLDEGDKTHI 400
LH KI+HRD+K N+L+ +L ISDFGL KLD G
Sbjct: 148 HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 401 S--TRIAGTIGYMAPEY---ALWGYLTYKADVYSFGIVALEIVS 439
+GT G+ APE + LT D++S G V I+S
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNRE----FLNEI 287
+KQ++ +F+ K IG G FG V +L + + ++ +K R F E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 288 AMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICL 347
++ + +H + + L LV +Y L L E D +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFE------DRLPEEMARF 179
Query: 348 GIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTHISTRIAGT 407
+A + + + VHRDIK N+L+D + + +++DFG D T S+ GT
Sbjct: 180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
Query: 408 IGYMAPEYALW-----GYLTYKADVYSFGIVALEIVSGKNNMSYAPAL 450
Y++PE G + D +S G+ E++ G+ YA +L
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF-YAESL 286
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPN 297
T+ ++ + IG G + + A AVK + R E EI ++ QHPN
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEI--EI-LLRYGQHPN 77
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQK---------ICLG 348
++ + +G + +V E + L LD RQK +
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGEL-------------LDKILRQKFFSEREASAVLFT 124
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVL-LDRDLNP---KISDFGLAKLDEGDKTHISTRI 404
I + + +LH + +VHRD+K +N+L +D NP +I DFG AK + + T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 405 AGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSGKNNMSYAP 448
T ++APE D++S G++ ++G + P
Sbjct: 182 Y-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGP 224
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 44/228 (19%)
Query: 244 SAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREF----LNEIAMIS-CLQHPNL 298
S K +G G G V G +AVK++ +F L EI +++ HPN+
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNV 71
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGR----ENCELELDWPTRQKICLGIARGLA 354
++ + C D+ L + + N +L + + EN +L+ ++ + IA G+A
Sbjct: 72 IRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLRQIASGVA 129
Query: 355 FLHEESRFKIVHRDIKATNVLLD-------------RDLNPKISDFGLAKLDEGDKTHIS 401
LH KI+HRD+K N+L+ +L ISDFGL K + ++
Sbjct: 130 HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 402 TRI---AGTIGYMAPE-------YALWGYLTYKADVYSFGIVALEIVS 439
T + +GT G+ APE LT D++S G V I+S
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 56/244 (22%)
Query: 248 IGEGGFGPVYKGQLADGT--IIAVKQLS-SKSRQGN----REFLNEIAMISCLQHPNLVK 300
IG+G +G V + + + T I A+K ++ +K RQ N E+ ++ L HPN+ +
Sbjct: 34 IGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 301 IHGCCVEGDQLLLVYE-------------YMENNSLACAL-------FGRENCELE---- 336
++ + + LV E ++++++ CA+ C E
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 337 --------LDWPTRQKICLGIAR----GLAFLHEESRFKIVHRDIKATNVLL--DRDLNP 382
LD+ R+K+ I R L +LH + I HRDIK N L ++
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEI 209
Query: 383 KISDFGLA----KLDEGDKTHISTRIAGTIGYMAPEYALWGYLTY--KADVYSFGIVALE 436
K+ DFGL+ KL+ G+ ++T+ AGT ++APE +Y K D +S G++
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTK-AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 437 IVSG 440
++ G
Sbjct: 269 LLMG 272
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 50/232 (21%)
Query: 242 FDSAKKIGEGGFGPVYK--GQLADGTIIAVKQLSSKSR--QGNR------EFLNEI---A 288
++ +GEG FG V + A G +AVK + + R + R E LN +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
C+Q + HG + +V+E + L+ F +EN L +K+
Sbjct: 76 TFRCVQMLEWFEHHG------HICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQ 126
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVL-------------LDRD----LNP--KISDFGL 389
I + + FLH K+ H D+K N+L + RD +NP K+ DFG
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 390 AKLD-EGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
A D E T +STR Y APE L + DV+S G + +E G
Sbjct: 184 ATYDDEHHSTLVSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 268 AVKQLSSKSRQGNREFLNEIAMI-SCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACA 326
AVK + + E+ M+ C H N++++ E D+ LV+E M S+
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 327 LFGRENC-ELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR--DLNP- 382
+ R + ELE + +A L FLH + I HRD+K N+L + ++P
Sbjct: 102 IHKRRHFNELEAS-----VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPV 153
Query: 383 KISDFGLA---KLDEGDKTHIST----RIAGTIGYMAPEYA-----LWGYLTYKADVYSF 430
KI DF L KL+ GD + IST G+ YMAPE + D++S
Sbjct: 154 KICDFDLGSGIKLN-GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 431 GIVALEIVSG 440
G++ ++SG
Sbjct: 213 GVILYILLSG 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 239 TNNFDSAKKIGEGGFGPV-YKGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPN 297
++ ++ K IG G FG ++AVK + + + + EI L+HPN
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPN 76
Query: 298 LVKIHGCCVEGDQLLLVYEYMENNSLACAL--FGRENCELELDWPTRQKICLGIARGLAF 355
+V+ + L +V EY L + GR + E E + +Q I G+++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-----GVSY 130
Query: 356 LHEESRFKIVHRDIKATNVLLDRDLNP--KISDFGLAKLDEGDKTHISTR-IAGTIGYMA 412
H ++ HRD+K N LLD P KI FG +K H + GT Y+A
Sbjct: 131 CHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIA 184
Query: 413 PEYALWG-YLTYKADVYSFGIVALEIVSG 440
PE L Y ADV+S G+ ++ G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 15/199 (7%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSK--SRQGNREFLNEIAMISCLQHPNLVKIHGC 304
K+ E G ++KG+ G I VK L + S + +R+F E + HPN++ + G
Sbjct: 17 KLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 305 C--VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRF 362
C L+ + SL L E +D K L ARG AFLH
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVL--HEGTNFVVDQSQAVKFALDXARGXAFLHTLEPL 133
Query: 363 KIVHRDIKATNVLLDRDLNPKIS--DFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGY 420
I + + +V +D D +IS D + G + + +A PE
Sbjct: 134 -IPRHALNSRSVXIDEDXTARISXADVKFSFQSPG-RXYAPAWVAPEALQKKPE----DT 187
Query: 421 LTYKADVYSFGIVALEIVS 439
AD +SF ++ E+V+
Sbjct: 188 NRRSADXWSFAVLLWELVT 206
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 89/214 (41%), Gaps = 24/214 (11%)
Query: 240 NNFDSAKKIGEGGFGPVYKG---QLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQ-H 295
N F +KIG G FG +Y G Q + I ++ + +K Q L E + LQ
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ----LLYESKIYRILQGG 62
Query: 296 PNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAF 355
+ + VEGD +LV + + + F C +L T + + + F
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEF 118
Query: 356 LHEESRFKIVHRDIKATNVL--LDRDLNP-KISDFGLAK--LDEGDKTHISTR----IAG 406
+H +S +HRDIK N L L R N I DFGLAK D HI R + G
Sbjct: 119 VHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
Query: 407 TIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
T Y + L + + D+ S G V + + G
Sbjct: 176 TARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQ-GNREFLNEIAMISCLQHP 296
+++F +GEG +G V G I+A+K++ + L EI ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 297 NLVKIHGCCVEG-----DQLLLVYEYMENN---SLACALFGRENCELELDWPTRQKICLG 348
N++ I +++ ++ E M+ + ++ + ++ Q
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI---------QYFIYQ 120
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDE---------GDKT 398
R + LH + ++HRD+K +N+L++ + + K+ DFGLA+ +DE G ++
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 399 HISTRIAGTIGYMAPEYALWGYLTYKA-DVYSFGIVALEI 437
++ +A T Y APE L +A DV+S G + E+
Sbjct: 178 GMTEXVA-TRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 247 KIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQG-NREFLNEIAMISCLQHPNLVKIHGCC 305
K+G G +G VYK + DG L G + EIA++ L+HPN++ +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 306 VE--GDQLLLVYEYMENNSLACALFGR----ENCELELDWPTRQKICLGIARGLAFLHEE 359
+ ++ L+++Y E++ F R ++L + + I G+ +LH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 360 SRFKIVHRDIKATNVLL----DRDLNPKISDFGLAKLDEGDKTHIS--TRIAGTIGYMAP 413
++HRD+K N+L+ KI+D G A+L ++ + T Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 414 EYALWG-YLTYKADVYSFGIVALEIVSGK 441
E L + T D+++ G + E+++ +
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQ-GNREFLNEIAMISCLQHP 296
+++F +GEG +G V G I+A+K++ + L EI ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 297 NLVKIHGCCVEG-----DQLLLVYEYMENN---SLACALFGRENCELELDWPTRQKICLG 348
N++ I +++ ++ E M+ + ++ + ++ Q
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI---------QYFIYQ 120
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDE--GDKTHISTRIA 405
R + LH + ++HRD+K +N+L++ + + K+ DFGLA+ +DE D + + + +
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 406 GTIG------YMAPEYALWGYLTYKA-DVYSFGIVALEI 437
G + Y APE L +A DV+S G + E+
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 22/200 (11%)
Query: 224 DLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNR 281
DL T + + + + K+IG GG V++ I A+K L Q
Sbjct: 12 DLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD 71
Query: 282 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPT 341
+ NEIA ++ LQ D+++ +Y+Y + + N +L W
Sbjct: 72 SYRNEIAYLNKLQQ-----------HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLK 119
Query: 342 RQKICLGIARG------LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEG 395
++K R L +H + IVH D+K N L+ D K+ DFG+A +
Sbjct: 120 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQP 178
Query: 396 DKTH-ISTRIAGTIGYMAPE 414
D T + GT+ YM PE
Sbjct: 179 DTTSVVKDSQVGTVNYMPPE 198
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 239 TNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQ-GNREFLNEIAMISCLQHP 296
+++F +GEG +G V G I+A+K++ + L EI ++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 297 NLVKIHGCCVEG-----DQLLLVYEYMENN---SLACALFGRENCELELDWPTRQKICLG 348
N++ I +++ ++ E M+ + ++ + ++ Q
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI---------QYFIYQ 120
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-LDE--GDKTHIS---- 401
R + LH + ++HRD+K +N+L++ + + K+ DFGLA+ +DE D + +
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 402 --TRIAGTIGYMAPEYALWGYLTYKA-DVYSFGIVALEI 437
T T Y APE L +A DV+S G + E+
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 352 GLAFLHEESRFKIVHRDIKATNVLLDR-----DLNPKISDFGLAKLDEGDKTHISTR--I 404
GLA LH IVHRD+K N+L+ + ISDFGL K + S R +
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 405 AGTIGYMAPEYA---LWGYLTYKADVYSFGIVALEIVSGKNNMSYAPALEFDCTCLLDWA 461
GT G++APE TY D++S G V ++S + + + +L+ LL A
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS-EGSHPFGKSLQRQANILLG-A 244
Query: 462 CHLQQDGKLVELVDERLGSKYKKEEAERMIKVSLLCTNASPSLRPTMSEV 511
C L L E+ +E E+MI + P RP+ V
Sbjct: 245 CSLDC------LHPEKHEDVIARELIEKMIAM-------DPQKRPSAKHV 281
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 44/228 (19%)
Query: 244 SAKKIGEGGFGPVYKGQLADGTIIAVKQLSSKSRQGNREF----LNEIAMIS-CLQHPNL 298
S K +G G G V G +AVK++ +F L EI +++ HPN+
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNV 71
Query: 299 VKIHGCCVEGDQLLLVYEYMENNSLACALFGR----ENCELELDWPTRQKICLGIARGLA 354
++ + C D+ L + + N +L + + EN +L+ ++ + IA G+A
Sbjct: 72 IRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY-NPISLLRQIASGVA 129
Query: 355 FLHEESRFKIVHRDIKATNVLLD-------------RDLNPKISDFGLA-KLDEGDKTHI 400
LH KI+HRD+K N+L+ +L ISDFGL KLD G
Sbjct: 130 HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 401 S--TRIAGTIGYMAPE-------YALWGYLTYKADVYSFGIVALEIVS 439
+GT G+ APE LT D++S G V I+S
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 245 AKKIGEGGFGPVYK-GQLADGTIIAVKQLSSKSRQGNREFL--NEIAMISCLQHPNLVKI 301
A+ +G G FG V++ + + K + K G + L EI++++ +H N++ +
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHL 66
Query: 302 HGCCVEGDQLLLVYEYMENNSLACALFGRENCE-LELDWPTRQKICLGIARGLAFLHEES 360
H ++L++++E++ +F R N EL+ + L FLH +
Sbjct: 67 HESFESMEELVMIFEFIS----GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 361 RFKIVHRDIKATNVLLD--RDLNPKISDFGLAK-LDEGDKTHISTRIAGTIGYMAPEYAL 417
I H DI+ N++ R KI +FG A+ L GD + + Y APE
Sbjct: 123 ---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL---LFTAPEYYAPEVHQ 176
Query: 418 WGYLTYKADVYSFGIVALEIVSGKN 442
++ D++S G + ++SG N
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGIN 201
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
K+IG GG V++ I A+K L Q + NEIA ++ LQ
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 113
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG------LAFLH 357
D+++ +Y+Y + + N +L W ++K R L +H
Sbjct: 114 ---HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH-ISTRIAGTIGYMAPE 414
+ IVH D+K N L+ D K+ DFG+A + D T + GT+ YM PE
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
K+IG GG V++ I A+K L Q + NEIA ++ LQ
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 66
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG------LAFLH 357
D+++ +Y+Y + + N +L W ++K R L +H
Sbjct: 67 ---HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH-ISTRIAGTIGYMAPE 414
+ IVH D+K N L+ D K+ DFG+A + D T + GT+ YM PE
Sbjct: 123 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
K+IG GG V++ I A+K L Q + NEIA ++ LQ
Sbjct: 18 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 69
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG------LAFLH 357
D+++ +Y+Y + + N +L W ++K R L +H
Sbjct: 70 ---HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLKKKKSIDPWERKSYWKNMLEAVH 125
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH-ISTRIAGTIGYMAPE 414
+ IVH D+K N L+ D K+ DFG+A + D T + GT+ YM PE
Sbjct: 126 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
K+IG GG V++ I A+K L Q + NEIA ++ LQ
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 113
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG------LAFLH 357
D+++ +Y+Y + + N +L W ++K R L +H
Sbjct: 114 ---HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH-ISTRIAGTIGYMAPE 414
+ IVH D+K N L+ D K+ DFG+A + D T + GT+ YM PE
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 242 FDSAKKIGEGGFGPVYK--GQLADGTIIAVKQLSSKSR--QGNR------EFLNEI---A 288
++ +GEG FG V + A G +AVK + + R + R E LN +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLG 348
C+Q + HG + +V+E + L+ F +EN L +K+
Sbjct: 76 TFRCVQMLEWFEHHG------HICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQ 126
Query: 349 IARGLAFLHEESRFKIVHRDIKATNVL-------------LDRD----LNP--KISDFGL 389
I + + FLH K+ H D+K N+L + RD +NP K+ DFG
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 390 AKLDEGDKTHISTRIAGTIGYMAPEYALWGYLTYKADVYSFGIVALEIVSG 440
A D+ H ST + Y APE L + DV+S G + +E G
Sbjct: 184 ATYDD---EHHSTLVXXR-HYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
K+IG GG V++ I A+K L Q + NEIA ++ LQ
Sbjct: 14 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 65
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG------LAFLH 357
D+++ +Y+Y + + N +L W ++K R L +H
Sbjct: 66 ---HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLKKKKSIDPWERKSYWKNMLEAVH 121
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH-ISTRIAGTIGYMAPE 414
+ IVH D+K N L+ D K+ DFG+A + D T + GT+ YM PE
Sbjct: 122 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 22/200 (11%)
Query: 224 DLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNR 281
DL T + + + + K+IG GG V++ I A+K L Q
Sbjct: 12 DLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLD 71
Query: 282 EFLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPT 341
+ NEIA ++ LQ D+++ +Y+Y + + N +L W
Sbjct: 72 SYRNEIAYLNKLQQ-----------HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLK 119
Query: 342 RQKICLGIARG------LAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEG 395
++K R L +H + IVH D+K N L+ D K+ DFG+A +
Sbjct: 120 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQP 178
Query: 396 DKTH-ISTRIAGTIGYMAPE 414
D + GT+ YM PE
Sbjct: 179 DXXXVVKDSQVGTVNYMPPE 198
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLNEI-AMISCLQHPNLVKIHGCC 305
+GEG + V L +G AVK + ++ E+ + C + N++++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 306 VEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIV 365
+ + LV+E ++ S+ + +++ + ++ +A L FLH + I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRDVAAALDFLHTKG---IA 133
Query: 366 HRDIKATNVLLD--RDLNP-KISDFGLA---KLDEGDKTHIS----TRIAGTIGYMAPEY 415
HRD+K N+L + ++P KI DF L KL+ T I+ T G+ YMAPE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLN-NSCTPITTPELTTPCGSAEYMAPEV 192
Query: 416 A-----LWGYLTYKADVYSFGIVALEIVSG 440
+ + D++S G+V ++SG
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 279 GNREFLNEIAMISCLQHPNLVKIHGCCV--EGDQLLLVYEYMENNSLACALFGRENCELE 336
G EI ++ L+H N++++ E ++ +V EY C + + E
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY-----CVCGMQEMLDSVPE 103
Query: 337 LDWPTRQK---ICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 393
+P Q C + GL +LH + IVH+DIK N+LL KIS G+A+
Sbjct: 104 KRFPVCQAHGYFC-QLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
Query: 394 EGDKTHISTRIA-GTIGYMAPEYA--LWGYLTYKADVYSFGIVALEIVSG 440
+ R + G+ + PE A L + +K D++S G+ I +G
Sbjct: 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 248 IGEGGFGPVYKG-QLADGTIIAVKQLSS--KSRQGNREFLNEIAMISCLQHPNLVKIHGC 304
IG G +G V + + ++A+K++ + + L EIA+++ L H ++VK+
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 305 CVEGD-----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHEE 359
+ D +L +V E +++ LF EL T + + G+ ++H
Sbjct: 121 VIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKT---LLYNLLVGVKYVHSA 175
Query: 360 SRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 391
I+HRD+K N L+++D + K+ DFGLA+
Sbjct: 176 G---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 33/256 (12%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLN------ 285
K+ + + + +G GGFG VY G +++D +A+K + E N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 286 EIAMISCLQH--PNLVKIHGCCVEGDQLLLVYEYMEN-NSLACALFGRENCELELDWPTR 342
E+ ++ + ++++ D +L+ E ME L + R + EL
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL----A 116
Query: 343 QKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHIS 401
+ + + H ++HRDIK N+L+D + K+ DFG L K +
Sbjct: 117 RSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVY 170
Query: 402 TRIAGTIGYMAPEYALWG-YLTYKADVYSFGIVALEIVSG-----------KNNMSYAPA 449
T GT Y PE+ + Y A V+S GI+ ++V G + + +
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 230
Query: 450 LEFDCTCLLDWACHLQ 465
+ +C L+ W L+
Sbjct: 231 VSSECQHLIRWCLALR 246
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 22/178 (12%)
Query: 246 KKIGEGGFGPVYKGQLADGTIIAVK--QLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
K+IG GG V++ I A+K L Q + NEIA ++ LQ
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-------- 113
Query: 304 CCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARG------LAFLH 357
D+++ +Y+Y + + N +L W ++K R L +H
Sbjct: 114 ---HSDKIIRLYDYEITDQYIYMVMECGNIDLN-SWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 358 EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEGDKTH-ISTRIAGTIGYMAPE 414
+ IVH D+K N L+ D K+ DFG+A + D T + G + YM PE
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 50/228 (21%)
Query: 248 IGEGGFGPVY----KGQLADGTIIAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKIHG 303
IG G +G VY K + I V ++ R L EI +++ L+ +++++
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR-ILREITILNRLKSDYIIRLYD 92
Query: 304 CCVEGD-----QLLLVYEYMENNSLACALFGRENCELELDWPTRQKICLGIARGLAFLHE 358
+ D +L +V E +++ LF + L + I + G F+HE
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSD--LKKLFK---TPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 359 ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK-------------LDEGDK-------- 397
I+HRD+K N LL++D + K+ DFGLA+ L+E ++
Sbjct: 148 SG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 398 -----THISTRIAGTIGYMAPEYALWGY-LTYKADVYSFGIVALEIVS 439
+H+ TR Y APE L T D++S G + E+++
Sbjct: 205 KKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 100/259 (38%), Gaps = 60/259 (23%)
Query: 222 ESDLQTISFTLKQIKAATNNFDSAKKIGEGGFGPVYKGQLADG----TIIAVKQLSSKSR 277
+ D + + F+ K+ N F +K+G+G FG V Q D + V+ + +R
Sbjct: 17 QGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTR 76
Query: 278 QGNRE--FLNEIAMISCLQHPNLVKIHGCCVEGDQLLLVYEYM---------ENNSLACA 326
E L +I + N+VK HG + D + L++E + NN
Sbjct: 77 SAKIEADILKKIQNDDINNN-NIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNG-- 133
Query: 327 LFGRENCELELDWPTRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD--------- 377
F E+ +L C+ I + L +L + S + H D+K N+LLD
Sbjct: 134 -FHIEDIKL---------YCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLI 180
Query: 378 ----------------RDLNPKISDFGLAKLDEGDKTHISTRIAGTIGYMAPEYALWGYL 421
+ K+ DFG A K+ I T Y APE L
Sbjct: 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATF----KSDYHGSIINTRQYRAPEVILNLGW 236
Query: 422 TYKADVYSFGIVALEIVSG 440
+D++SFG V E+ +G
Sbjct: 237 DVSSDMWSFGCVLAELYTG 255
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 31/256 (12%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLN--EIA 288
+K+ + + + +G GGFG VY G +++D +A+K + E N +
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPT-RQKICL 347
M L L K+ +LL +E +S L E + D+ T R +
Sbjct: 83 MEVVL----LKKVSSGFSGVIRLLDWFE--RPDSFVLILERPEPVQDLFDFITERGALQE 136
Query: 348 GIARGLAFLHEES-----RFKIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHIS 401
+AR + E+ ++HRDIK N+L+D + K+ DFG L K +
Sbjct: 137 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVY 193
Query: 402 TRIAGTIGYMAPEYALWG-YLTYKADVYSFGIVALEIVSG-----------KNNMSYAPA 449
T GT Y PE+ + Y A V+S GI+ ++V G + + +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 253
Query: 450 LEFDCTCLLDWACHLQ 465
+ +C L+ W L+
Sbjct: 254 VSXECQHLIRWCLALR 269
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 31/256 (12%)
Query: 232 LKQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLN--EIA 288
+K+ + + + +G GGFG VY G +++D +A+K + E N +
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 289 MISCLQHPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELELDWPT-RQKICL 347
M L L K+ +LL +E +S L E + D+ T R +
Sbjct: 61 MEVVL----LKKVSSGFSGVIRLLDWFE--RPDSFVLILERPEPVQDLFDFITERGALQE 114
Query: 348 GIARGLAFLHEES-----RFKIVHRDIKATNVLLDRDLNP-KISDFGLAKLDEGDKTHIS 401
+AR + E+ ++HRDIK N+L+D + K+ DFG L K +
Sbjct: 115 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL---LKDTVY 171
Query: 402 TRIAGTIGYMAPEYALWG-YLTYKADVYSFGIVALEIVSG-----------KNNMSYAPA 449
T GT Y PE+ + Y A V+S GI+ ++V G + + +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 231
Query: 450 LEFDCTCLLDWACHLQ 465
+ +C L+ W L+
Sbjct: 232 VSSECQHLIRWCLALR 247
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 24/222 (10%)
Query: 233 KQIKAATNNFDSAKKIGEGGFGPVYKG-QLADGTIIAVKQLSSKSRQGNREFLN------ 285
K +A + +G+GGFG V+ G +L D +A+K + G +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 286 EIAMISCLQ----HPNLVKIHGCCVEGDQLLLVYEYMENNSLACALFGRENCELEL-DWP 340
E+A++ + HP ++++ + +LV +E A LF + L + P
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGP 140
Query: 341 TRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD-RDLNPKISDFGLAKLDEGDKTH 399
+R C A H SR +VHRDIK N+L+D R K+ DFG L +
Sbjct: 141 SR---CFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY- 195
Query: 400 ISTRIAGTIGYMAPEY-ALWGYLTYKADVYSFGIVALEIVSG 440
T GT Y PE+ + Y A V+S GI+ ++V G
Sbjct: 196 --TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,437,021
Number of Sequences: 62578
Number of extensions: 597075
Number of successful extensions: 3884
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 1349
Number of HSP's gapped (non-prelim): 1131
length of query: 511
length of database: 14,973,337
effective HSP length: 103
effective length of query: 408
effective length of database: 8,527,803
effective search space: 3479343624
effective search space used: 3479343624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)