Query 045836
Match_columns 154
No_of_seqs 127 out of 865
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 10:06:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045836.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045836hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q7r_A Arachidonate 5-lipoxyge 100.0 8.2E-32 2.8E-36 205.3 12.6 128 13-149 3-131 (161)
2 3pcv_A Leukotriene C4 synthase 100.0 5.8E-31 2E-35 199.7 14.9 126 17-150 2-128 (156)
3 3dww_A Prostaglandin E synthas 99.9 6.8E-24 2.3E-28 161.0 14.3 142 9-150 7-156 (158)
4 2h8a_A Microsomal glutathione 99.9 4.8E-23 1.7E-27 155.3 2.7 130 17-146 9-149 (154)
5 1bl1_A Parathyroid hormone rec 22.3 30 0.001 18.6 0.9 9 111-119 21-29 (31)
6 3ehu_C Corticoliberin; G prote 12.5 81 0.0028 15.4 1.0 9 69-77 5-13 (21)
7 2i15_A A05_ORF129, hypothetica 7.2 2.9E+02 0.01 18.9 2.5 22 71-92 92-113 (135)
8 1go9_A Corticotropin releasing 7.0 1.7E+02 0.0057 16.7 1.0 9 69-77 26-34 (42)
9 2lp1_A C99; alzheimer'S D memb 8.9 1.1E+02 0.0037 21.5 0.0 11 72-82 80-90 (122)
10 3bz1_y Protein YCF12; electron 6.3 4.6E+02 0.016 15.1 3.0 38 2-39 4-41 (46)
No 1
>2q7r_A Arachidonate 5-lipoxygenase-activating protein; flap, mapeg, membrane protein, lipid transport; HET: 3CS; 4.00A {Homo sapiens} SCOP: f.56.1.1 PDB: 2q7m_A*
Probab=99.97 E-value=8.2e-32 Score=205.26 Aligned_cols=128 Identities=17% Similarity=0.206 Sum_probs=115.1
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHH
Q 045836 13 TQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVG 92 (154)
Q Consensus 13 ~~~~p~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~ 92 (154)
.++++ ||+++.+++++.++++++++++|+++|+|+|+++|.+++|+ +|||+||||+|++||+|+|+++++++
T Consensus 3 ~~~~~-e~~~~~l~a~l~~l~~~~~s~~V~~~R~k~~V~~p~~~g~~-------~f~R~~RAh~N~lE~~P~fl~llll~ 74 (161)
T 2q7r_A 3 QETVG-NVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTL-------AFERVYTANQNCVDAYPTFLAVLWSA 74 (161)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSCCCH-------HHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred eeeec-cHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCCCCCCCCcH-------HHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44554 99999999999999999999999999999999999877654 49999999999999999999999999
Q ss_pred Hhh-hHHHHHHHHHHHHHHHHHHhHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 045836 93 GLK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGI 149 (154)
Q Consensus 93 ~l~-~p~~~~~~g~~~~~gRi~y~~gY~~g~p~~R~~gg~~~~~~~l~l~~~~~~~~~ 149 (154)
++. +|.+++.+|.+|+++|++|+.||.. +|++|..|+.+++++.+.+++++++...
T Consensus 75 ~l~g~~~~a~~~G~i~l~gRily~~gY~~-~p~~R~~G~~~~~l~l~~l~~~~l~gi~ 131 (161)
T 2q7r_A 75 GLLCSQVPAAFAGLMYLFVRQKYFVGYLG-ERTQSTPGYIFGKRIILFLFLMSVAGIF 131 (161)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHTCC-SSSCCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHHHHHHHhC-CCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 7899999999999999999999986 5889999556789999888888887654
No 2
>3pcv_A Leukotriene C4 synthase; membrane protein, helix bundle, HOMO trimer, MGST, mapeg, LY; HET: GSH LMT; 1.90A {Homo sapiens} PDB: 2pno_A* 3b29_A* 2uui_A* 2uuh_A* 3hkk_A* 3leo_A*
Probab=99.97 E-value=5.8e-31 Score=199.66 Aligned_cols=126 Identities=27% Similarity=0.348 Sum_probs=114.1
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHHHhh-
Q 045836 17 PTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLK- 95 (154)
Q Consensus 17 p~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~~l~- 95 (154)
++|..+++++++++++++++++++|+++|+|+|+++|.+++|+ +|||+||||||++||+|+|+++++++++.
T Consensus 2 ~~el~lla~v~vl~~l~~~~~s~~V~~~R~k~~V~~P~~~g~~-------~f~Ra~RAH~N~lE~~P~fl~ll~l~~l~~ 74 (156)
T 3pcv_A 2 KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPP-------EFERVYRAQVNCSEYFPLFLATLWVAGIFF 74 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTCCCCSH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHHHhhHHHHHHHHHHHHHHHHcC
Confidence 4677889999999999999999999999999999999877654 49999999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHHH
Q 045836 96 HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGIN 150 (154)
Q Consensus 96 ~p~~~~~~g~~~~~gRi~y~~gY~~g~p~~R~~gg~~~~~~~l~l~~~~~~~~~~ 150 (154)
.|.+++.+|.+|+++|++|++||..+ |++|+.|..+++.+.+.|++++++....
T Consensus 75 ~~~~a~~lg~~~~~gRily~~gY~~~-~~~R~~G~~~t~~~~~~L~~~~~~Gi~~ 128 (156)
T 3pcv_A 75 HEGAAALCGLVYLFARLRYFQGYARS-AQLRLAPLYASARALWLLVALAALGLLA 128 (156)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHC-GGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcC-CCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999988 9999995567888889888888876643
No 3
>3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens}
Probab=99.91 E-value=6.8e-24 Score=161.05 Aligned_cols=142 Identities=14% Similarity=0.066 Sum_probs=108.4
Q ss_pred cchhccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--Cc--cccccchhhhHHHhHHHHhhhhhhhhHH
Q 045836 9 VAAATQFLP-TEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYP--TL--YAVESENKEAKLFNCVQRGHQNSLELMP 83 (154)
Q Consensus 9 ~~~~~~~~p-~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~~p--~~--~~~~~~~~~~~~~~ra~RAH~N~~E~~p 83 (154)
||+-+.++. +.+.-.++.+.+.+++++++++.|++.|.+.|+... |. .++++.+.++++++|++|||+|++||+|
T Consensus 7 ~~~~~~~~~~~v~~~~a~~a~ll~lk~l~ls~~t~~~R~~~kvf~~pED~~~~g~~~~~~~~~~~~Ra~RAh~N~lE~~p 86 (158)
T 3dww_A 7 MPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIY 86 (158)
T ss_dssp ----------CHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCCCSTTSCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCCChHHHHhcCCccccCCCcHHHHHHHHHHHHHHHHH
Confidence 343333333 334555777888899999999999999999987432 10 1112224567899999999999999999
Q ss_pred HHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHhHhhccCCCC-CchhhhHHHHHHHHHHHHHHHHHHHH
Q 045836 84 VFFMLMIVGGLK--HPCVCAVLGSLFTVTRFFYFKGYATGDPQ-KRLTIGKYGFLALLGLMVCTISFGIN 150 (154)
Q Consensus 84 ~fl~~~ll~~l~--~p~~~~~~g~~~~~gRi~y~~gY~~g~p~-~R~~gg~~~~~~~l~l~~~~~~~~~~ 150 (154)
+|+++++++++. +|.+++.++.+|+++|++|+++|..+.|+ .|+.++.+++++.+.+.+..+..+.+
T Consensus 87 ~Fl~~~ll~~l~g~~~~~~~~l~~~fv~~Rilh~~~Y~~~~p~~~Rsl~~~vg~~~~~~m~~~~l~~~~~ 156 (158)
T 3dww_A 87 PFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAAR 156 (158)
T ss_dssp HHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHTTSSCCGGGGHHHHHHHHSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998 66899999999999999999999988744 79996678888888888777776554
No 4
>2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1
Probab=99.86 E-value=4.8e-23 Score=155.25 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=102.0
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCC---cccc---cc-chhhhHHHhHHHHhhhhhhhhHHHHHHH
Q 045836 17 PTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVP-YPT---LYAV---ES-ENKEAKLFNCVQRGHQNSLELMPVFFML 88 (154)
Q Consensus 17 p~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~-~p~---~~~~---~~-~~~~~~~~~ra~RAH~N~~E~~p~fl~~ 88 (154)
++.+...+..+++.+++.++++..|++.|.++|+. -|+ .++| ++ ..+.+++++|++|||+|++|++|+|+++
T Consensus 9 ~~~~~~~~~~a~ll~l~~l~~s~~v~~~R~~~~~~~~~ed~~~~g~~~~~~~~~~~~~~~~Ra~rAh~N~~E~~p~F~~~ 88 (154)
T 2h8a_A 9 NEVLMAFTSYATIILAKMMFLSSATAFQRLTNKVFANPEDCAGFGKGENAKKFLRTDEKVERVRRAHLNDLENIVPFLGI 88 (154)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHGGGSCCCCCCCTTC------------------CHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCChHHHhhhcccccccccccCCHHHHHHHHHHHhhhhHHHHHHHH
Confidence 45577778888888999999999999999998872 222 1111 11 1346678999999999999999999999
Q ss_pred HHHHHhh--hHHHHHHHHHHHHHHHHHHhHhhccCCC-CCchhhhHHHHHHHHHHHHHHHH
Q 045836 89 MIVGGLK--HPCVCAVLGSLFTVTRFFYFKGYATGDP-QKRLTIGKYGFLALLGLMVCTIS 146 (154)
Q Consensus 89 ~ll~~l~--~p~~~~~~g~~~~~gRi~y~~gY~~g~p-~~R~~gg~~~~~~~l~l~~~~~~ 146 (154)
++++++. .+.+++.++.+|+++|++|+.+|..+.| ..|+.++.+++++.+.+.+..+.
T Consensus 89 ~ll~~~~g~~~~~~~~l~~~~v~~Ri~h~~~y~~~~~~~~R~~~~~~~~~~~~~l~~~~l~ 149 (154)
T 2h8a_A 89 GLLYSLSGPDLSTALIHFRIFVGARIYHTIAYLTPLPQPNRGLAFFVGYGVTLSMAYRLLR 149 (154)
T ss_dssp HHHTTTSCCCSTTHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHTHHHHHHHHTC--
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 3589999999999999999999998888 58998666777777777665544
No 5
>1bl1_A Parathyroid hormone receptor; micelle structures, calciotropic hormones, structures; NMR {Homo sapiens} SCOP: j.15.1.1
Probab=22.26 E-value=30 Score=18.61 Aligned_cols=9 Identities=33% Similarity=0.778 Sum_probs=5.6
Q ss_pred HHHHhHhhc
Q 045836 111 RFFYFKGYA 119 (154)
Q Consensus 111 Ri~y~~gY~ 119 (154)
.++|++||.
T Consensus 21 ~~iYTVGYS 29 (31)
T 1bl1_A 21 GMIYTVGYS 29 (31)
T ss_dssp HHHHHHHHH
T ss_pred eeEEEEeee
Confidence 356777774
No 6
>3ehu_C Corticoliberin; G protein-coupled receptor, corticotropin releasing factor, fold, MBP fusion, extracellular domain, sugar transport; HET: BTB MAL; 1.96A {Escherichia coli}
Probab=12.55 E-value=81 Score=15.40 Aligned_cols=9 Identities=33% Similarity=0.519 Sum_probs=6.4
Q ss_pred hHHHHhhhh
Q 045836 69 NCVQRGHQN 77 (154)
Q Consensus 69 ~ra~RAH~N 77 (154)
+-+++||.|
T Consensus 5 q~~qQA~~N 13 (21)
T 3ehu_C 5 QLAQQAHSN 13 (26)
T ss_pred HHHHHHHHh
Confidence 356778887
No 7
>2i15_A A05_ORF129, hypothetical protein Mg296 homolog; structural genomics, MPN423, hypothetical protien, all alpha structure, PSI; 2.40A {Mycoplasma pneumoniae} SCOP: a.291.1.1
Probab=7.22 E-value=2.9e+02 Score=18.89 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=17.3
Q ss_pred HHHhhhhhhhhHHHHHHHHHHH
Q 045836 71 VQRGHQNSLELMPVFFMLMIVG 92 (154)
Q Consensus 71 a~RAH~N~~E~~p~fl~~~ll~ 92 (154)
.+.+-||+.|.+.+|+.++.+.
T Consensus 92 ~~~ccq~fyeal~~fisalait 113 (135)
T 2i15_A 92 VKSCCQSFYEALTLFISALAIT 113 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3566789999999998777654
No 8
>1go9_A Corticotropin releasing hormone; synthetic analogues, solid phase synthesis, solutions structure; HET: DPN AIB; NMR {Synthetic} SCOP: j.16.1.1 PDB: 1goe_A* 2rme_A* 2rmd_A* 2rmi_A* 2jnd_B*
Probab=7.04 E-value=1.7e+02 Score=16.67 Aligned_cols=9 Identities=33% Similarity=0.519 Sum_probs=6.6
Q ss_pred hHHHHhhhh
Q 045836 69 NCVQRGHQN 77 (154)
Q Consensus 69 ~ra~RAH~N 77 (154)
+-+|+||.|
T Consensus 26 ~~~qqA~~N 34 (42)
T 1go9_A 26 QLAQQAHSN 34 (42)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 356888888
No 9
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=8.90 E-value=1.1e+02 Score=21.46 Aligned_cols=11 Identities=27% Similarity=0.175 Sum_probs=6.6
Q ss_pred HHhhhhhhhhH
Q 045836 72 QRGHQNSLELM 82 (154)
Q Consensus 72 ~RAH~N~~E~~ 82 (154)
..-|+|.-||-
T Consensus 80 a~MQ~nGYENP 90 (122)
T 2lp1_A 80 SKMQQNGYENP 90 (122)
Confidence 33467777764
No 10
>3bz1_y Protein YCF12; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 3bz2_y* 3kzi_y* 3prq_y* 3prr_y*
Probab=6.34 E-value=4.6e+02 Score=15.12 Aligned_cols=38 Identities=11% Similarity=0.129 Sum_probs=15.4
Q ss_pred CcccccccchhccccCccchHHHHHHHHHHHHHHHHHH
Q 045836 2 FSSIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGF 39 (154)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~~~~v~l~~~l~~l~~~~~s~ 39 (154)
|..|..-++.|.+++--+..-++++.+..-+..++++.
T Consensus 4 ~~~~~~~~~~mN~evI~QL~~LalIv~aGPlVI~LLa~ 41 (46)
T 3bz1_y 4 FNGIIEFLSNINFEVIAQLTMIAMIGIAGPMIIFLLAV 41 (46)
T ss_dssp ---------------CCTHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHcCCHHHHHHHHHHHHHHHcccHHhhhHHh
Confidence 33344445556677777777777777777666666554
Done!