Your job contains 1 sequence.
>045842
MSLKEILPPVKSNHASFYDHSNDMWFKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRKI
EDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKKIV
YSQHKDLIPKFLRNDEEEEETDEEMQREIDETTQETKACLEKVVNVKLSAAQPKNVPQQS
SDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFKHKRVPRASGSPPVPVMHS
PPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALY
VAEQKAREAVAMRSKVQKEMLMKEKERKEQELRALAQKARSERTGAAPPASVPIPSEKSA
MDTSDMREDYEHERERRRERDMPKETREEREERLQREKLRAERRRERERERRLEAKDAAM
GKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYD
KGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDR
PVEFEKEAEEADPFGLDEFLTEVKKGGKKALDKVGTGGTMRASAGSSMRDDYGGSGFEFI
KAVLSFEAFSLQASVDVFNSNDLSGTHIRRPSWFNAPTAPQPLIKRHVGGSETKKNCSRW
ACMLRGCASYSIIQFKSPTLSVSLPLRPSLSQPRLDSVIFMNLKDIGASAVSCYSGNKNH
FFSWILFCLLPKFLGTPIAYVPFFLIKVVDRSPSSAFVLDNSGET
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045842
(765 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2195970 - symbol:SKIP "SNW/Ski-interacting pro... 1178 1.6e-193 2
UNIPROTKB|Q1JQE0 - symbol:SNW1 "SNW domain-containing pro... 803 7.8e-114 2
UNIPROTKB|J9P334 - symbol:SNW1 "Uncharacterized protein" ... 803 7.8e-114 2
UNIPROTKB|I3L897 - symbol:SNW1 "Uncharacterized protein" ... 803 7.8e-114 2
UNIPROTKB|Q13573 - symbol:SNW1 "SNW domain-containing pro... 800 1.3e-113 2
UNIPROTKB|Q5R7R9 - symbol:SNW1 "SNW domain-containing pro... 800 1.3e-113 2
RGD|1561926 - symbol:Snw1 "SNW domain containing 1" speci... 798 3.4e-113 2
UNIPROTKB|F1NNJ3 - symbol:SNW1 "Uncharacterized protein" ... 807 5.5e-113 2
UNIPROTKB|E2RNF5 - symbol:SNW1 "Uncharacterized protein" ... 799 8.9e-113 2
MGI|MGI:1913604 - symbol:Snw1 "SNW domain containing 1" s... 790 3.0e-112 2
FB|FBgn0004856 - symbol:Bx42 "Bx42" species:7227 "Drosoph... 718 1.3e-107 2
UNIPROTKB|G3V3A4 - symbol:SNW1 "SNW domain-containing pro... 800 1.8e-101 2
WB|WBGene00004806 - symbol:skp-1 species:6239 "Caenorhabd... 655 1.8e-93 2
UNIPROTKB|Q22836 - symbol:T27F2.1 "Uncharacterized protei... 655 1.8e-93 2
UNIPROTKB|G4N190 - symbol:MGG_07472 "Pre-mRNA-processing ... 668 1.0e-92 2
ASPGD|ASPL0000009849 - symbol:AN8180 species:162425 "Emer... 650 3.0e-91 2
POMBASE|SPCC188.11 - symbol:prp45 "splicing factor Prp45"... 672 3.0e-89 2
DICTYBASE|DDB_G0269188 - symbol:snwA "nuclear receptor co... 597 1.9e-85 2
UNIPROTKB|G3V4X8 - symbol:SNW1 "SNW domain-containing pro... 496 1.5e-81 2
ZFIN|ZDB-GENE-030131-571 - symbol:snw1 "SNW domain contai... 775 4.1e-79 2
GENEDB_PFALCIPARUM|PFB0875c - symbol:PFB0875c "Chromatin-... 456 9.7e-53 3
UNIPROTKB|O96267 - symbol:PFB0875c "Chromatin-binding pro... 456 9.7e-53 3
UNIPROTKB|G3V5R3 - symbol:SNW1 "SNW domain-containing pro... 285 2.0e-43 2
SGD|S000000030 - symbol:PRP45 "Protein required for pre-m... 185 5.9e-15 2
CGD|CAL0006088 - symbol:orf19.5513 species:5476 "Candida ... 206 7.3e-15 1
UNIPROTKB|Q5AC37 - symbol:PRP45 "Pre-mRNA-processing prot... 206 7.3e-15 1
>TAIR|locus:2195970 [details] [associations]
symbol:SKIP "SNW/Ski-interacting protein" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=ISS;IMP] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0010555 "response to mannitol stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0042752 "regulation of
circadian rhythm" evidence=IGI] InterPro:IPR004015
InterPro:IPR017862 Pfam:PF02731 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0045893 GO:GO:0005730
GO:GO:0008380 GO:GO:0009651 EMBL:AC004260 GO:GO:0042752
GO:GO:0005681 GO:GO:0010228 GO:GO:0000398 eggNOG:NOG295848
KO:K06063 OMA:HIYRPSK PANTHER:PTHR12096 GO:GO:0010555
HOGENOM:HOG000160386 UniGene:At.71064 EMBL:AF386950 EMBL:AY058079
EMBL:AY081520 EMBL:AK175914 EMBL:AK176196 EMBL:AK176338
EMBL:AK176413 EMBL:AK176837 EMBL:AK221263 IPI:IPI00548698
PIR:T00448 RefSeq:NP_001031291.1 RefSeq:NP_565151.1
UniGene:At.22662 IntAct:O80653 STRING:O80653 PaxDb:O80653
PRIDE:O80653 ProMEX:O80653 EnsemblPlants:AT1G77180.1
EnsemblPlants:AT1G77180.2 GeneID:844055 KEGG:ath:AT1G77180
TAIR:At1g77180 InParanoid:O80653 PhylomeDB:O80653
ProtClustDB:CLSN2718907 Genevestigator:O80653 Uniprot:O80653
Length = 613
Score = 1178 (419.7 bits), Expect = 1.6e-193, Sum P(2) = 1.6e-193
Identities = 238/367 (64%), Positives = 268/367 (73%)
Query: 2 SLKEILPPVKSNHASFYDHSNDMWFKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRKIE 61
SL + LP KS ++YDHSND WFKN SE KS K K VP YL RQG P+ E
Sbjct: 3 SLND-LPAPKSTTTTYYDHSNDAWFKNRVTESETVKSSSIKFKVVPAYLNRQGLRPKNPE 61
Query: 62 DFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKKIVY 121
DFGDGGAFPEIH+ QYPL MG+NKS KPG+ LPV+VDA GNV +DAIV+QNENS+KIVY
Sbjct: 62 DFGDGGAFPEIHLPQYPLLMGKNKSNKPGAKTLPVTVDAQGNVVFDAIVRQNENSRKIVY 121
Query: 122 SQHKDLIPKFLRNXXXXXXXXXXXXXXXXX---TTQETKACLEKVVNVKLSAAQPKNVPQ 178
SQHKD+IPKFL+N T +ETKA +EK+VNV+LSAAQP N+ +
Sbjct: 122 SQHKDIIPKFLKNEGDLGTVVDEEEELQKEIQETAEETKAAIEKIVNVRLSAAQPSNIAR 181
Query: 179 QSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFKHKRVPRAXXXXXXXXX 238
QS DS+YIKYKPSQQS AFNSGAKER+IRM+EMPVDPL+PPKFKHKRVPRA
Sbjct: 182 QSGDSQYIKYKPSQQSSAFNSGAKERIIRMVEMPVDPLDPPKFKHKRVPRASGSPPVPVM 241
Query: 239 XXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA 298
TVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA
Sbjct: 242 HSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA 301
Query: 299 LYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSERTGAAPPASVPIPSEK 358
LYVAEQKAREAV+MRSKV ALAQKARSERTGAA S+P+ S++
Sbjct: 302 LYVAEQKAREAVSMRSKVQKEMVMKDKERKEQELRALAQKARSERTGAA--MSMPVSSDR 359
Query: 359 SAMDTSD 365
++ D
Sbjct: 360 GRSESVD 366
Score = 719 (258.2 bits), Expect = 1.6e-193, Sum P(2) = 1.6e-193
Identities = 143/186 (76%), Positives = 162/186 (87%)
Query: 415 AKDAAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDD 474
AKDAAMGKKSKITRDRDRDISEK ALGMASTG GGEVMYDQRLFNQ+KGMDSGFA DD
Sbjct: 419 AKDAAMGKKSKITRDRDRDISEKVALGMASTGGKGGGEVMYDQRLFNQDKGMDSGFAADD 478
Query: 475 QYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSER 534
QYN+YDKGLFTAQPTLSTLY+PKKD D++MYG NADEQ++KI T+RFKPDK F G+SER
Sbjct: 479 QYNLYDKGLFTAQPTLSTLYKPKKDNDEEMYG-NADEQLDKIKNTERFKPDKAFTGASER 537
Query: 535 SGP-RDRPVEFEKEAEEADPFGLDEFLTEVKKGGKKALDKVGTGGTMRASAG---SSMRD 590
G RDRPVEFEKE EE DPFGL+++++++KKG KK LDK+G+GGTMRAS G SS D
Sbjct: 538 VGSKRDRPVEFEKE-EEQDPFGLEKWVSDLKKG-KKPLDKIGSGGTMRASGGGGSSSRDD 595
Query: 591 DYGGSG 596
D+GGSG
Sbjct: 596 DHGGSG 601
>UNIPROTKB|Q1JQE0 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9913
"Bos taurus" [GO:0071146 "SMAD3-SMAD4 protein complex"
evidence=ISS] [GO:0016363 "nuclear matrix" evidence=ISS]
[GO:0008024 "positive transcription elongation factor complex b"
evidence=ISS] [GO:0046332 "SMAD binding" evidence=ISS] [GO:0042974
"retinoic acid receptor binding" evidence=ISS] [GO:0042809 "vitamin
D receptor binding" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0070562 "regulation of
vitamin D receptor signaling pathway" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0048385 "regulation of retinoic acid receptor signaling
pathway" evidence=ISS] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=ISS] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=ISS] [GO:0030511 "positive regulation of
transforming growth factor beta receptor signaling pathway"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0050769
"positive regulation of neurogenesis" evidence=ISS] [GO:0035257
"nuclear hormone receptor binding" evidence=ISS] [GO:0048384
"retinoic acid receptor signaling pathway" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005112 "Notch binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0003714 GO:GO:0042771 GO:GO:0071300 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0050769 GO:GO:0046332
GO:GO:0030511 GO:GO:0048385 GO:GO:0016363 GO:GO:0048384
GO:GO:0042974 GO:GO:0000398 GO:GO:0071013 GO:GO:0051571
eggNOG:NOG295848 GeneTree:ENSGT00390000010423 KO:K06063 OMA:HIYRPSK
PANTHER:PTHR12096 GO:GO:0048026 GO:GO:0042809 GO:GO:0070562
HOGENOM:HOG000160386 EMBL:BC116009 IPI:IPI00760492
RefSeq:NP_001071302.1 UniGene:Bt.42459 STRING:Q1JQE0 PRIDE:Q1JQE0
Ensembl:ENSBTAT00000010697 GeneID:326578 KEGG:bta:326578 CTD:22938
HOVERGEN:HBG047516 InParanoid:Q1JQE0 OrthoDB:EOG4RBQJG
NextBio:20809651 ArrayExpress:Q1JQE0 Uniprot:Q1JQE0
Length = 536
Score = 803 (287.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 159/312 (50%), Positives = 207/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VDA G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 AIQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 340 (124.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 77/155 (49%), Positives = 99/155 (63%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + +YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 430 YNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRRQ 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 51 (23.0 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRRQRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>UNIPROTKB|J9P334 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0005681
GO:GO:0000398 GeneTree:ENSGT00390000010423 OMA:HIYRPSK
PANTHER:PTHR12096 EMBL:AAEX03005881 Ensembl:ENSCAFT00000049121
Uniprot:J9P334
Length = 536
Score = 803 (287.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 159/312 (50%), Positives = 207/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VDA G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 AIQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 340 (124.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 77/155 (49%), Positives = 99/155 (63%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + +YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 430 YNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRRQ 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 51 (23.0 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRRQRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>UNIPROTKB|I3L897 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0005112 "Notch binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR004015
InterPro:IPR017862 Pfam:PF02731 GO:GO:0045892 GO:GO:0071300
GO:GO:0045944 GO:GO:0048384 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000010423 OMA:HIYRPSK PANTHER:PTHR12096
PRIDE:I3L897 Ensembl:ENSSSCT00000025189 Uniprot:I3L897
Length = 536
Score = 803 (287.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 159/312 (50%), Positives = 207/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VDA G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 AIQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 340 (124.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 77/155 (49%), Positives = 99/155 (63%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + +YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 430 YNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRRQ 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 51 (23.0 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRRQRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>UNIPROTKB|Q13573 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005112 "Notch binding"
evidence=IPI] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0044428 "nuclear part" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071300 "cellular response to
retinoic acid" evidence=IDA] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IDA] [GO:0050769 "positive regulation
of neurogenesis" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IDA]
[GO:0070564 "positive regulation of vitamin D receptor signaling
pathway" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IDA] [GO:0071146 "SMAD3-SMAD4
protein complex" evidence=IDA] [GO:0042974 "retinoic acid receptor
binding" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IDA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IMP] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0048385 "regulation of retinoic acid receptor
signaling pathway" evidence=IDA] [GO:0008024 "positive
transcription elongation factor complex b" evidence=IDA]
[GO:0043923 "positive regulation by host of viral transcription"
evidence=IMP;IDA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR004015
InterPro:IPR017862 Pfam:PF02731 EMBL:AF045184 Reactome:REACT_111102
GO:GO:0003714 GO:GO:0005654 EMBL:CH471061 GO:GO:0042771
GO:GO:0071300 GO:GO:0045944 GO:GO:0007219 GO:GO:0000785
GO:GO:0000122 GO:GO:0003713 GO:GO:0050769 GO:GO:0046332
GO:GO:0030511 GO:GO:0048385 GO:GO:0016363 GO:GO:0048384
GO:GO:0006367 GO:GO:0042974 GO:GO:0000398 GO:GO:0071013
GO:GO:0051571 eggNOG:NOG295848 KO:K06063 PANTHER:PTHR12096
Reactome:REACT_2155 GO:GO:0048026 GO:GO:0070564 GO:GO:0043923
GO:GO:0042809 HOGENOM:HOG000160386 CTD:22938 HOVERGEN:HBG047516
OrthoDB:EOG4RBQJG EMBL:U51432 EMBL:BT020060 EMBL:BT020061
EMBL:AK292274 EMBL:AC008372 EMBL:BC040112 EMBL:BC046105
EMBL:BC108903 EMBL:U43960 IPI:IPI00013830 RefSeq:NP_036377.1
UniGene:Hs.445498 ProteinModelPortal:Q13573 IntAct:Q13573
MINT:MINT-193944 STRING:Q13573 PhosphoSite:Q13573 DMDM:2500813
PaxDb:Q13573 PeptideAtlas:Q13573 PRIDE:Q13573 DNASU:22938
Ensembl:ENST00000261531 GeneID:22938 KEGG:hsa:22938 UCSC:uc001xuf.3
GeneCards:GC14M078183 HGNC:HGNC:16696 HPA:CAB009931 HPA:HPA002457
HPA:HPA017370 MIM:603055 neXtProt:NX_Q13573 PharmGKB:PA134883977
InParanoid:Q13573 PhylomeDB:Q13573 GenomeRNAi:22938 NextBio:43687
ArrayExpress:Q13573 Bgee:Q13573 CleanEx:HS_SNW1
Genevestigator:Q13573 GermOnline:ENSG00000100603 Uniprot:Q13573
Length = 536
Score = 800 (286.7 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 158/312 (50%), Positives = 207/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VD+ G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 AIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 341 (125.1 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 77/155 (49%), Positives = 100/155 (64%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + ++YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 430 YNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRRQ 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 50 (22.7 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRRQRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>UNIPROTKB|Q5R7R9 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9601
"Pongo abelii" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0016363
"nuclear matrix" evidence=ISS] [GO:0030511 "positive regulation of
transforming growth factor beta receptor signaling pathway"
evidence=ISS] [GO:0035257 "nuclear hormone receptor binding"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
[GO:0042809 "vitamin D receptor binding" evidence=ISS] [GO:0042974
"retinoic acid receptor binding" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0046332 "SMAD binding" evidence=ISS]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISS] [GO:0048385 "regulation of retinoic acid
receptor signaling pathway" evidence=ISS] [GO:0050769 "positive
regulation of neurogenesis" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:0070562
"regulation of vitamin D receptor signaling pathway" evidence=ISS]
[GO:0008024 "positive transcription elongation factor complex b"
evidence=ISS] [GO:0071146 "SMAD3-SMAD4 protein complex"
evidence=ISS] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0003714 GO:GO:0042771 GO:GO:0045944 GO:GO:0005681
GO:GO:0000122 GO:GO:0003713 GO:GO:0050769 GO:GO:0046332
GO:GO:0030511 GO:GO:0048385 GO:GO:0016363 GO:GO:0048384
GO:GO:0042974 GO:GO:0000398 GO:GO:0051571 KO:K06063
PANTHER:PTHR12096 GO:GO:0048026 GO:GO:0042809 GO:GO:0070562
CTD:22938 HOVERGEN:HBG047516 EMBL:CR860041 RefSeq:NP_001127521.1
UniGene:Pab.18846 PRIDE:Q5R7R9 GeneID:100174597 KEGG:pon:100174597
Uniprot:Q5R7R9
Length = 536
Score = 800 (286.7 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 158/312 (50%), Positives = 207/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VD+ G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 AIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKVTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 341 (125.1 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 77/155 (49%), Positives = 100/155 (64%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + ++YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 430 YNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRRQ 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 50 (22.7 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRRQRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>RGD|1561926 [details] [associations]
symbol:Snw1 "SNW domain containing 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0000785
"chromatin" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0005112 "Notch binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016363 "nuclear matrix" evidence=ISO] [GO:0030511
"positive regulation of transforming growth factor beta receptor
signaling pathway" evidence=ISO] [GO:0035257 "nuclear hormone
receptor binding" evidence=IEA;ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=ISO] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043923 "positive regulation by host of viral
transcription" evidence=ISO] [GO:0044428 "nuclear part"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA;ISO] [GO:0048385 "regulation of retinoic acid receptor
signaling pathway" evidence=ISO] [GO:0050769 "positive regulation
of neurogenesis" evidence=ISO] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0070562 "regulation of
vitamin D receptor signaling pathway" evidence=ISO] [GO:0070564
"positive regulation of vitamin D receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0008024
"positive transcription elongation factor complex b" evidence=ISO]
[GO:0071146 "SMAD3-SMAD4 protein complex" evidence=ISO]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 RGD:1561926
GO:GO:0045892 GO:GO:0071300 GO:GO:0045944 GO:GO:0000785
GO:GO:0048384 GO:GO:0000398 GO:GO:0071013 EMBL:CH473982
GeneTree:ENSGT00390000010423 KO:K06063 PANTHER:PTHR12096 CTD:22938
OrthoDB:EOG4RBQJG IPI:IPI00476223 RefSeq:NP_001102749.1
UniGene:Rn.220230 Ensembl:ENSRNOT00000057807 GeneID:500695
KEGG:rno:500695 UCSC:RGD:1561926 NextBio:707018 Uniprot:D4A8G7
Length = 536
Score = 798 (286.0 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 158/312 (50%), Positives = 206/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VD G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 AIQVDPEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 339 (124.4 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 77/155 (49%), Positives = 100/155 (64%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + ++YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 430 YNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG----DDLETRIKTNRFVPDKEFSGSDGRK 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 52 (23.4 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QSIYRPSKNLDKDMYGDDLETRIKTNRFVPDKEFS-------GSDGRKRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>UNIPROTKB|F1NNJ3 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005112 "Notch binding" evidence=IEA] [GO:0035257 "nuclear
hormone receptor binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048384 "retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 GO:GO:0045892 GO:GO:0071300 GO:GO:0045944
GO:GO:0048384 GO:GO:0000398 GO:GO:0071013
GeneTree:ENSGT00390000010423 OMA:HIYRPSK PANTHER:PTHR12096
EMBL:AADN02003502 IPI:IPI00595301 Ensembl:ENSGALT00000017099
Uniprot:F1NNJ3
Length = 538
Score = 807 (289.1 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 161/312 (51%), Positives = 208/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ +L + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTALVSSRREPPPYGYRKGWIPRTLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
V VDA G + YDAI +Q ++ KI+YS++ DL+PK + N T +
Sbjct: 87 AVQVDAEGKIKYDAIARQGQSKDKIIYSKYTDLVPKEVMNVDDPELQRPDEETIREIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+A LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRAALEKSVSQKIAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 328 (120.5 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 77/157 (49%), Positives = 99/157 (63%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRPSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSE-- 533
YNVYD+ + + +YRP K+ D DMYG + +E +KT+RF PDK F+ S
Sbjct: 430 YNVYDQPWRSGKDMAQNIYRPSKNVDKDMYG----DDLEARIKTNRFVPDKEFSNSDRNT 485
Query: 534 RSGPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R RD PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGRGRDGPVQFEE-----DPFGLDKFLEEAKQHGGSK 517
Score = 47 (21.6 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 24/102 (23%), Positives = 36/102 (35%)
Query: 449 RGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGN 508
R G+ M Q ++ K +D DD F S R + D G
Sbjct: 438 RSGKDMA-QNIYRPSKNVDKDMYGDDLEARIKTNRFVPDKEFSNSDRNTRGRGRD---GP 493
Query: 509 ADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
+ E D+F + G S+R RP E E E+++
Sbjct: 494 VQFE-EDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHESKK 534
>UNIPROTKB|E2RNF5 [details] [associations]
symbol:SNW1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0005681
GO:GO:0000398 GeneTree:ENSGT00390000010423 PANTHER:PTHR12096
EMBL:AAEX03007745 Ensembl:ENSCAFT00000000889 OMA:VHINENV
NextBio:20894654 Uniprot:E2RNF5
Length = 536
Score = 799 (286.3 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 158/312 (50%), Positives = 207/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VDA G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 TIQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++P+ TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPQGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 334 (122.6 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
Identities = 76/155 (49%), Positives = 98/155 (63%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQ LFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQSLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + +YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 430 YNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRRQ 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 51 (23.0 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRRQRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>MGI|MGI:1913604 [details] [associations]
symbol:Snw1 "SNW domain containing 1" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005112 "Notch binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0035257 "nuclear
hormone receptor binding" evidence=ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=IMP] [GO:0042771 "intrinsic
apoptotic signaling pathway in response to DNA damage by p53 class
mediator" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043923 "positive regulation by host of viral
transcription" evidence=ISO] [GO:0044428 "nuclear part"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0048385 "regulation of retinoic acid receptor
signaling pathway" evidence=ISO] [GO:0050769 "positive regulation
of neurogenesis" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=ISO] [GO:0070562 "regulation of
vitamin D receptor signaling pathway" evidence=ISO] [GO:0070564
"positive regulation of vitamin D receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO;IDA] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 MGI:MGI:1913604 GO:GO:0003714 GO:GO:0042771
GO:GO:0071300 GO:GO:0045944 GO:GO:0005681 GO:GO:0000122
GO:GO:0003713 GO:GO:0050769 GO:GO:0046332 GO:GO:0030511
GO:GO:0048385 GO:GO:0016363 GO:GO:0048384 GO:GO:0035914
GO:GO:0042974 GO:GO:0000398 GO:GO:0051571 eggNOG:NOG295848
KO:K06063 PANTHER:PTHR12096 GO:GO:0048026 GO:GO:0042809
GO:GO:0070562 HOGENOM:HOG000160386 CTD:22938 HOVERGEN:HBG047516
OrthoDB:EOG4RBQJG EMBL:AK012384 EMBL:BY734581 IPI:IPI00317298
RefSeq:NP_079783.2 UniGene:Mm.271174 ProteinModelPortal:Q9CSN1
IntAct:Q9CSN1 MINT:MINT-1346847 STRING:Q9CSN1 PhosphoSite:Q9CSN1
PaxDb:Q9CSN1 PRIDE:Q9CSN1 DNASU:66354 GeneID:66354 KEGG:mmu:66354
UCSC:uc007ojf.1 InParanoid:Q9CSN1 ChiTaRS:SNW1 NextBio:321413
CleanEx:MM_SNW1 Genevestigator:Q9CSN1 GermOnline:ENSMUSG00000021039
Uniprot:Q9CSN1
Length = 536
Score = 790 (283.2 bits), Expect = 3.0e-112, Sum P(2) = 3.0e-112
Identities = 156/311 (50%), Positives = 205/311 (65%)
Query: 36 EKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNILP 95
+ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 31 QTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNALA 87
Query: 96 VSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQE 155
+ VD G + YDAI +Q ++ K++YS++ DL+PK + N T ++
Sbjct: 88 IQVDPEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-EK 146
Query: 156 TKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDP 215
T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM +P
Sbjct: 147 TRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKEP 206
Query: 216 LEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDK 274
+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIP+DK
Sbjct: 207 MEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPIDK 266
Query: 275 RLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXA 334
RLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 267 RLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLRE 326
Query: 335 LAQKARSERTG 345
+AQKAR R G
Sbjct: 327 MAQKARERRAG 337
Score = 338 (124.0 bits), Expect = 3.0e-112, Sum P(2) = 3.0e-112
Identities = 76/155 (49%), Positives = 100/155 (64%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + ++YRP K+ D DMYG + +E +KT+RF PDK F+GS +
Sbjct: 430 YNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRKQ 485
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 486 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 515
Score = 51 (23.0 bits), Expect = 5.8e-82, Sum P(2) = 5.8e-82
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 436 AWRGGKDMA-QSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRKQRG 487
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 488 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 532
>FB|FBgn0004856 [details] [associations]
symbol:Bx42 "Bx42" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS] [GO:0035214 "eye-antennal disc
development" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=NAS] [GO:0001700 "embryonic development via the syncytial
blastoderm" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;IC] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 GO:GO:0001700 GO:GO:0003677 EMBL:AE014298
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 EMBL:X64536 EMBL:AY113364
PIR:A56575 RefSeq:NP_511093.2 UniGene:Dm.2932 DIP:DIP-17877N
IntAct:P39736 MINT:MINT-334628 STRING:P39736 PaxDb:P39736
PRIDE:P39736 EnsemblMetazoa:FBtr0071350 EnsemblMetazoa:FBtr0333809
GeneID:31840 KEGG:dme:Dmel_CG8264 CTD:31840 FlyBase:FBgn0004856
eggNOG:NOG295848 GeneTree:ENSGT00390000010423 InParanoid:P39736
KO:K06063 OMA:HIYRPSK OrthoDB:EOG4PNVZ4 PhylomeDB:P39736
GenomeRNAi:31840 NextBio:775589 Bgee:P39736 GermOnline:CG8264
GO:GO:0035214 PANTHER:PTHR12096 Uniprot:P39736
Length = 547
Score = 718 (257.8 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 158/362 (43%), Positives = 213/362 (58%)
Query: 1 MSLKEILPPVKSNHASFYDHSNDMWFKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRKI 60
MSL +LP +N + +D ++ + + + K +L + + PPY +R+ +VP
Sbjct: 1 MSLSSLLP-TPTN--AIWDREDER--RLVARGAPKIGALVSAKIAAPPYGQRKDWVPHTD 55
Query: 61 EDFGDGGAFPEIHIGQYPLDMGR-NKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKKI 119
DFGDGGAFPEIH+ QYPL +G GK S+ L V +D G V YDAI +Q KI
Sbjct: 56 ADFGDGGAFPEIHVAQYPLGLGAPGNVGKK-SDALAVRLDDKGKVKYDAIARQGHGKDKI 114
Query: 120 VYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQETKACLEKVVNVKLSAAQPKNVPQQ 179
VYS L+P + TT+ET+ LEK+ N K+++A P Q+
Sbjct: 115 VYSSISQLLPAEVL-AEDADELQRPDEETVMETTEETRLALEKLTNQKITSALPVRHAQK 173
Query: 180 SSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFK-HKRVPRAXXXXXXXXX 238
+ ++YI+Y PSQQ FNSGAK+RVIRM+E +DP+EPPKF+ +K++PR
Sbjct: 174 AGPAQYIRYTPSQQGDTFNSGAKQRVIRMVEAQLDPMEPPKFRINKKIPRGPPSPPAPVL 233
Query: 239 XXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEA 298
TVK+Q++WKIPPCISNWKN KGYTIPLDKRLAADGRGLQ V IN+ FAK++EA
Sbjct: 234 HSPSRKVTVKEQKEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQQVHINEKFAKMAEA 293
Query: 299 LYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSERTGAAPPASVPIPSEK 358
LY+A++KAREAV RS++ +AQ+AR ER G P + PS
Sbjct: 294 LYIADRKAREAVEARSQLEKKLAQKEKEKKEDMLRMMAQRAREERAGLRNPEAAE-PSGS 352
Query: 359 SA 360
A
Sbjct: 353 GA 354
Score = 366 (133.9 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 79/158 (50%), Positives = 103/158 (65%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYN 477
AA K+SK+ ++R+RDISE+ ALG+ + A G E ++DQRLFN KGMDSG+ D+ YN
Sbjct: 382 AAPEKRSKLQKERERDISEQIALGLPAKSAGNG-ETLFDQRLFNTTKGMDSGYGDDEAYN 440
Query: 478 VYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS-- 535
VYDK + + +YRP K AD D YGG+ D I+ T RF PDK F+G+S+ +
Sbjct: 441 VYDKPWRDSNTLGAHIYRPSKQADSDNYGGDLDA----IVNTKRFVPDKQFSGASKEAAA 496
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKKGGKKALDK 573
G R PVEFEKE DPFGLD+FL KK K+A +K
Sbjct: 497 GQRSGPVEFEKEE---DPFGLDQFLNMAKKAPKRAEEK 531
>UNIPROTKB|G3V3A4 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0005634 GO:GO:0005681 GO:GO:0000398 OMA:HIYRPSK
PANTHER:PTHR12096 EMBL:AC008372 HGNC:HGNC:16696
Ensembl:ENST00000555761 ArrayExpress:G3V3A4 Bgee:G3V3A4
Uniprot:G3V3A4
Length = 571
Score = 800 (286.7 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 158/312 (50%), Positives = 207/312 (66%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQ 154
+ VD+ G + YDAI +Q ++ K++YS++ DL+PK + N T +
Sbjct: 87 AIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEIT-E 145
Query: 155 ETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
+T+ LEK V+ K++AA P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM D
Sbjct: 146 KTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKD 205
Query: 215 PLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLD 273
P+EPP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLD
Sbjct: 206 PMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLD 265
Query: 274 KRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXX 333
KRLAADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V
Sbjct: 266 KRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLR 325
Query: 334 ALAQKARSERTG 345
+AQKAR R G
Sbjct: 326 EMAQKARERRAG 337
Score = 226 (84.6 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 51/106 (48%), Positives = 68/106 (64%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 429
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDR 521
YNVYD+ + ++YRP K+ D DMYG + +E +KT+R
Sbjct: 430 YNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG----DDLEARIKTNR 471
>WB|WBGene00004806 [details] [associations]
symbol:skp-1 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0042303 "molting cycle" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0060065 "uterus development" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0018996 GO:GO:0040011
GO:GO:0005681 GO:GO:0040035 GO:GO:0007281 GO:GO:0040025
GO:GO:0010468 GO:GO:0000398 eggNOG:NOG295848
GeneTree:ENSGT00390000010423 KO:K06063 OMA:HIYRPSK
PANTHER:PTHR12096 GO:GO:0060065 HOGENOM:HOG000160386 EMBL:Z74045
PIR:T25379 RefSeq:NP_505950.1 ProteinModelPortal:Q22836
DIP:DIP-26404N IntAct:Q22836 MINT:MINT-250943 STRING:Q22836
PaxDb:Q22836 PRIDE:Q22836 EnsemblMetazoa:T27F2.1.1
EnsemblMetazoa:T27F2.1.2 GeneID:179598 KEGG:cel:CELE_T27F2.1
CTD:179598 WormBase:T27F2.1 InParanoid:Q22836 NextBio:906094
Uniprot:Q22836
Length = 535
Score = 655 (235.6 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 148/347 (42%), Positives = 203/347 (58%)
Query: 1 MSLKEILP-PVKSNHASFYDHSNDMWFKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRK 59
M L++ILP PV ++ A+ D WF N E +L +K +P PPY KR F PR
Sbjct: 3 MKLRDILPAPVAADEAASQIR-RDPWFGGRDN--EPSAALVSK-EP-PPYGKRTSFRPRG 57
Query: 60 IEDFGDGGAFPEIHIGQYPLDMGR-NKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKK 118
EDFGDGGAFPEIH+ Q+PL +G + GKP N L + G + +DAI + K
Sbjct: 58 PEDFGDGGAFPEIHVAQFPLGLGLGDMRGKP-ENTLALQYGTDGKLQHDAIARIGHVKDK 116
Query: 119 IVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQETKACLEKVVNVKLSAAQPKNVPQ 178
+VYS+ D+ K T++T+ LEK+VN K+++A P
Sbjct: 117 VVYSKLNDMKAKTWNEDDDDIQKPDDDAVIDA--TEKTRMALEKIVNSKVASALPVRHAD 174
Query: 179 QSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFK-HKRVPRAXXXXXXXX 237
+ + ++YI+Y PSQQ+ A +G+++R+IRM+E DP+EPPKFK ++++PRA
Sbjct: 175 KLAPAQYIRYTPSQQNGA--AGSQQRIIRMVEEQKDPMEPPKFKINQKIPRAPPSPPAPV 232
Query: 238 XXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSE 297
T KDQ DWKIPPCISNWKNPKG+T+ LDKRLAADGRGLQ IN+NFAKL++
Sbjct: 233 MHSPPRKMTAKDQNDWKIPPCISNWKNPKGFTVGLDKRLAADGRGLQQTHINENFAKLAD 292
Query: 298 ALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSERT 344
ALY+A++KARE V R+++ A KAR ER+
Sbjct: 293 ALYIADRKAREEVETRAQLERRVAQNKKSEQEAKMAEAAAKARQERS 339
Score = 450 (163.5 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 96/214 (44%), Positives = 136/214 (63%)
Query: 153 TQETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMP 212
T++T+ LEK+VN K+++A P + + ++YI+Y PSQQ+ A +G+++R+IRM+E
Sbjct: 149 TEKTRMALEKIVNSKVASALPVRHADKLAPAQYIRYTPSQQNGA--AGSQQRIIRMVEEQ 206
Query: 213 VDPLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIP 271
DP+EPPKFK ++++PRA T KDQ DWKIPPCISNWKNPKG+T+
Sbjct: 207 KDPMEPPKFKINQKIPRAPPSPPAPVMHSPPRKMTAKDQNDWKIPPCISNWKNPKGFTVG 266
Query: 272 LDKRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXX 331
LDKRLAADGRGLQ IN+NFAKL++ALY+A++KARE V R+++
Sbjct: 267 LDKRLAADGRGLQQTHINENFAKLADALYIADRKAREEVETRAQLERR------------ 314
Query: 332 XXALAQKARSERTGAAPPASVPIPSEKSAMDTSD 365
+AQ +SE+ A+ E+SAM D
Sbjct: 315 ---VAQNKKSEQEAKMAEAAAKARQERSAMRRKD 345
Score = 295 (108.9 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 69/169 (40%), Positives = 95/169 (56%)
Query: 422 KKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDK 481
K K+ ++R+RDISEK LG+ T R GE +DQRLF++ +G+DSG DD YN YD
Sbjct: 379 KADKLRKERERDISEKIVLGLPDTNQKRTGEPQFDQRLFDKTQGLDSGAMDDDTYNPYDA 438
Query: 482 GLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRP 541
+YRP K+ D+D+YGG+ D+ +E+ +RF DKGF+G+ E S P
Sbjct: 439 AWRGGDSVQQHVYRPSKNLDNDVYGGDLDKIIEQ---KNRFVADKGFSGA-EGSSRGSGP 494
Query: 542 VEFEKEAEEADPFGLDEFLTEVKKGGKKALDKVGTGGTMRASAGSSMRD 590
V+FEK+ D FGL K+ KK + G GG R + S RD
Sbjct: 495 VQFEKDQ---DVFGLSSLFEHTKE--KK---RGGDGGDSRGESKRSRRD 535
Score = 47 (21.6 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 495 RPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPF 554
R K D DD+ + + +++ D + ++ A S + R E E++ E
Sbjct: 342 RRKDDEDDEQVKVREEIRRDRL---DDIRKERNIARSRPDKADKLRK-ERERDISEKIVL 397
Query: 555 GLDEFLTEVKKGGKKALDKVGTGGTMRASAGSSMRDD 591
GL + T K+ G+ D+ T +G+ M DD
Sbjct: 398 GLPD--TNQKRTGEPQFDQRLFDKTQGLDSGA-MDDD 431
>UNIPROTKB|Q22836 [details] [associations]
symbol:T27F2.1 "Uncharacterized protein T27F2.1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0018996
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 GO:GO:0007281
GO:GO:0040025 GO:GO:0010468 GO:GO:0000398 eggNOG:NOG295848
GeneTree:ENSGT00390000010423 KO:K06063 OMA:HIYRPSK
PANTHER:PTHR12096 GO:GO:0060065 HOGENOM:HOG000160386 EMBL:Z74045
PIR:T25379 RefSeq:NP_505950.1 ProteinModelPortal:Q22836
DIP:DIP-26404N IntAct:Q22836 MINT:MINT-250943 STRING:Q22836
PaxDb:Q22836 PRIDE:Q22836 EnsemblMetazoa:T27F2.1.1
EnsemblMetazoa:T27F2.1.2 GeneID:179598 KEGG:cel:CELE_T27F2.1
CTD:179598 WormBase:T27F2.1 InParanoid:Q22836 NextBio:906094
Uniprot:Q22836
Length = 535
Score = 655 (235.6 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 148/347 (42%), Positives = 203/347 (58%)
Query: 1 MSLKEILP-PVKSNHASFYDHSNDMWFKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRK 59
M L++ILP PV ++ A+ D WF N E +L +K +P PPY KR F PR
Sbjct: 3 MKLRDILPAPVAADEAASQIR-RDPWFGGRDN--EPSAALVSK-EP-PPYGKRTSFRPRG 57
Query: 60 IEDFGDGGAFPEIHIGQYPLDMGR-NKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKK 118
EDFGDGGAFPEIH+ Q+PL +G + GKP N L + G + +DAI + K
Sbjct: 58 PEDFGDGGAFPEIHVAQFPLGLGLGDMRGKP-ENTLALQYGTDGKLQHDAIARIGHVKDK 116
Query: 119 IVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQETKACLEKVVNVKLSAAQPKNVPQ 178
+VYS+ D+ K T++T+ LEK+VN K+++A P
Sbjct: 117 VVYSKLNDMKAKTWNEDDDDIQKPDDDAVIDA--TEKTRMALEKIVNSKVASALPVRHAD 174
Query: 179 QSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFK-HKRVPRAXXXXXXXX 237
+ + ++YI+Y PSQQ+ A +G+++R+IRM+E DP+EPPKFK ++++PRA
Sbjct: 175 KLAPAQYIRYTPSQQNGA--AGSQQRIIRMVEEQKDPMEPPKFKINQKIPRAPPSPPAPV 232
Query: 238 XXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSE 297
T KDQ DWKIPPCISNWKNPKG+T+ LDKRLAADGRGLQ IN+NFAKL++
Sbjct: 233 MHSPPRKMTAKDQNDWKIPPCISNWKNPKGFTVGLDKRLAADGRGLQQTHINENFAKLAD 292
Query: 298 ALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSERT 344
ALY+A++KARE V R+++ A KAR ER+
Sbjct: 293 ALYIADRKAREEVETRAQLERRVAQNKKSEQEAKMAEAAAKARQERS 339
Score = 450 (163.5 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 96/214 (44%), Positives = 136/214 (63%)
Query: 153 TQETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMP 212
T++T+ LEK+VN K+++A P + + ++YI+Y PSQQ+ A +G+++R+IRM+E
Sbjct: 149 TEKTRMALEKIVNSKVASALPVRHADKLAPAQYIRYTPSQQNGA--AGSQQRIIRMVEEQ 206
Query: 213 VDPLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIP 271
DP+EPPKFK ++++PRA T KDQ DWKIPPCISNWKNPKG+T+
Sbjct: 207 KDPMEPPKFKINQKIPRAPPSPPAPVMHSPPRKMTAKDQNDWKIPPCISNWKNPKGFTVG 266
Query: 272 LDKRLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXX 331
LDKRLAADGRGLQ IN+NFAKL++ALY+A++KARE V R+++
Sbjct: 267 LDKRLAADGRGLQQTHINENFAKLADALYIADRKAREEVETRAQLERR------------ 314
Query: 332 XXALAQKARSERTGAAPPASVPIPSEKSAMDTSD 365
+AQ +SE+ A+ E+SAM D
Sbjct: 315 ---VAQNKKSEQEAKMAEAAAKARQERSAMRRKD 345
Score = 295 (108.9 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 69/169 (40%), Positives = 95/169 (56%)
Query: 422 KKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDK 481
K K+ ++R+RDISEK LG+ T R GE +DQRLF++ +G+DSG DD YN YD
Sbjct: 379 KADKLRKERERDISEKIVLGLPDTNQKRTGEPQFDQRLFDKTQGLDSGAMDDDTYNPYDA 438
Query: 482 GLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRP 541
+YRP K+ D+D+YGG+ D+ +E+ +RF DKGF+G+ E S P
Sbjct: 439 AWRGGDSVQQHVYRPSKNLDNDVYGGDLDKIIEQ---KNRFVADKGFSGA-EGSSRGSGP 494
Query: 542 VEFEKEAEEADPFGLDEFLTEVKKGGKKALDKVGTGGTMRASAGSSMRD 590
V+FEK+ D FGL K+ KK + G GG R + S RD
Sbjct: 495 VQFEKDQ---DVFGLSSLFEHTKE--KK---RGGDGGDSRGESKRSRRD 535
Score = 47 (21.6 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 495 RPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPF 554
R K D DD+ + + +++ D + ++ A S + R E E++ E
Sbjct: 342 RRKDDEDDEQVKVREEIRRDRL---DDIRKERNIARSRPDKADKLRK-ERERDISEKIVL 397
Query: 555 GLDEFLTEVKKGGKKALDKVGTGGTMRASAGSSMRDD 591
GL + T K+ G+ D+ T +G+ M DD
Sbjct: 398 GLPD--TNQKRTGEPQFDQRLFDKTQGLDSGA-MDDD 431
>UNIPROTKB|G4N190 [details] [associations]
symbol:MGG_07472 "Pre-mRNA-processing protein 45"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
EMBL:CM001233 GO:GO:0005681 GO:GO:0000398 KO:K06063
PANTHER:PTHR12096 RefSeq:XP_003711376.1 EnsemblFungi:MGG_07472T0
GeneID:2683392 KEGG:mgr:MGG_07472 Uniprot:G4N190
Length = 575
Score = 668 (240.2 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 139/312 (44%), Positives = 186/312 (59%)
Query: 36 EKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNILP 95
E + KR PPY +R G+ PR EDFGDGGAFPE+ + QYPL MG K G SN L
Sbjct: 44 ETQVVLKRAGPPPYGQRSGWRPRSQEDFGDGGAFPEVPVAQYPLQMG--KKGATKSNALA 101
Query: 96 VSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQE 155
V V + G V YDAI +Q + +++++ KDLIP R TT+
Sbjct: 102 VQVGSDGKVKYDAIARQGHSDSRVIHTSFKDLIPLRQRAEAGDINLERPSEEEVAATTER 161
Query: 156 TKACLEKVVNVKLSAAQPKNVPQ-QSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVD 214
TK L +V+ ++A +PKNV Q D+ +++Y P+ Q + +S ++R+++++E D
Sbjct: 162 TKNALAALVSGAVAAQKPKNVNVGQRKDATFVRYTPANQ-MGDSSKKQDRIMKIVERQRD 220
Query: 215 PLEPPKFKHKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDK 274
P+EPPKFKHK++PR T +DQ+DW+IPP ISNWKNPKG+T+PLDK
Sbjct: 221 PMEPPKFKHKKIPRGPPSPPPPVMHSPPRKLTAQDQEDWRIPPPISNWKNPKGFTVPLDK 280
Query: 275 RLAADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXA 334
RLAADGRGLQDV IND FA+LSE+LYVA++ ARE V R+ +
Sbjct: 281 RLAADGRGLQDVTINDKFAQLSESLYVADRHAREEVKQRALMQQRLAEKEKAQKEENLRQ 340
Query: 335 LAQKARSERTGA 346
LAQKAR ER GA
Sbjct: 341 LAQKAREERAGA 352
Score = 275 (101.9 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 63/156 (40%), Positives = 93/156 (59%)
Query: 416 KDAAMGKKSKI---TRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFAT 472
+ + MG + ++ R+++RDISEK ALG+A + E MYD RLFNQ G + G
Sbjct: 398 RQSRMGAERRVQVMAREQNRDISEKIALGLAKP--TQSSEGMYDSRLFNQSSGFEGGINE 455
Query: 473 DDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKG---FA 529
D N YDK LF Q +S++YRP+ + DD+ D +M KI K R+ G F+
Sbjct: 456 D---NPYDKPLFAVQDAISSIYRPRANNDDEDEAAG-DAEMAKIQKASRYGEVLGRGTFS 511
Query: 530 GSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVKK 565
G+ + R+ PV+FEK+A ADPF +D+FL+EV++
Sbjct: 512 GAGDVEA-REGPVQFEKDAAGADPFNVDKFLSEVEQ 546
>ASPGD|ASPL0000009849 [details] [associations]
symbol:AN8180 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0005681 EMBL:BN001302 EMBL:AACD01000141 GO:GO:0000398
eggNOG:NOG295848 KO:K06063 OMA:HIYRPSK PANTHER:PTHR12096
RefSeq:XP_681449.1 STRING:Q5AU50 EnsemblFungi:CADANIAT00004222
GeneID:2868906 KEGG:ani:AN8180.2 HOGENOM:HOG000160386
OrthoDB:EOG4FJCK5 Uniprot:Q5AU50
Length = 583
Score = 650 (233.9 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 138/311 (44%), Positives = 185/311 (59%)
Query: 42 KRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNILPVSVDAH 101
+R PPY R G+ PR EDFGDGGAFPEI + QYPLDMGR K + SN L V VDA
Sbjct: 48 RRTGPPPYGNRAGWRPRAPEDFGDGGAFPEILVAQYPLDMGR-KGTQSKSNALAVQVDAE 106
Query: 102 GNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQETKACLE 161
G V YDAI ++ + +IV++ KDLIP R ++TK L
Sbjct: 107 GKVKYDAIARRGHSDDRIVHASFKDLIPLRQRVDMGEVSLDRPSEEEVQAQMEKTKNALA 166
Query: 162 KVVNVKLSAAQPKNVPQQS-SDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPK 220
+V+ ++A +PKNV S ++ +++Y P+ Q + S +R+++++E DP+EPPK
Sbjct: 167 SLVSGAVAAQKPKNVKGGSRAEPTFVRYTPANQ-MGDTSRKNDRIMKIVERQQDPMEPPK 225
Query: 221 FKHKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADG 280
FKHK++PR T +DQ+ WKIPP +SNWKNPKGYT+PLDKRLAADG
Sbjct: 226 FKHKKIPRGPPSPPPPIMHSPPRKLTAEDQEAWKIPPPVSNWKNPKGYTVPLDKRLAADG 285
Query: 281 RGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKAR 340
RGLQDV IND FA+ +EAL+ A++ ARE V +R+++ ALAQKAR
Sbjct: 286 RGLQDVSINDKFAQFAEALFTADRHAREEVRLRAQMQQRLAEKEKAQKEEHLRALAQKAR 345
Query: 341 SERTGAAPPAS 351
ER+ A AS
Sbjct: 346 EERSRAQSRAS 356
Score = 279 (103.3 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 68/166 (40%), Positives = 99/166 (59%)
Query: 416 KDAAMGKKSKI---TRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFAT 472
+ + MG + +I R+++RDISEK ALG+A + E M+D RLFNQ G+ +GF
Sbjct: 405 RQSRMGTERRIQAMAREQNRDISEKVALGLAKP--TQSSETMWDSRLFNQTSGLSTGFNE 462
Query: 473 DDQYNVYDKGLFTAQPTLSTLYRPKKDAD-DDMYGGNADEQMEKIMKTDRF----KPDKG 527
D N YDK LF AQ ++++YRPK AD DD +A+ +M KI K++RF + +G
Sbjct: 463 D---NPYDKPLFAAQDAINSIYRPKPQADFDDE--ADAEGEMSKIQKSNRFEVLGRAKEG 517
Query: 528 FAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVKKGGKKALDK 573
F G+++ R PV+FEK+ ADPFG+D + +V G A K
Sbjct: 518 FRGAADAE-ERSGPVQFEKDT--ADPFGIDSMIADVTGGAGGAGQK 560
>POMBASE|SPCC188.11 [details] [associations]
symbol:prp45 "splicing factor Prp45" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IPI] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=IPI] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 PomBase:SPCC188.11 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
eggNOG:NOG295848 KO:K06063 PANTHER:PTHR12096 GO:GO:0045292
HOGENOM:HOG000160386 OrthoDB:EOG4FJCK5 PIR:T39128
RefSeq:NP_588213.1 IntAct:Q09882 STRING:Q09882
EnsemblFungi:SPCC188.11.1 GeneID:2538988 KEGG:spo:SPCC188.11
OMA:IPPYGQR NextBio:20800163 Uniprot:Q09882
Length = 557
Score = 672 (241.6 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 147/352 (41%), Positives = 198/352 (56%)
Query: 3 LKEILPPVKSNHASFYDHSNDMWFKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRKIED 62
L E L + N F D D + ++ E++ ++ +PPY +R+G+ P ED
Sbjct: 4 LSEELSSILPN-PDFDDEEEDYVERETSHADERQIGVKFH---IPPYGQRKGWFPSSPED 59
Query: 63 FGDGGAFPEIHIGQYPLDMGRNKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKKIVYS 122
FGDGGAFPEIH+ QYPLDMGR +S K N L + V + G V Y+AI +Q ++V +
Sbjct: 60 FGDGGAFPEIHVAQYPLDMGRKRSAKSAGNTLALQVTSSGAVDYNAIARQGHEHGELVQA 119
Query: 123 QHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQETKACLEKVVNVKLSAAQPKN-VPQQSS 181
+DLIP R +TK L+K+++ +++ +QPK+ V QQ
Sbjct: 120 SFRDLIPLRARLGVGEISLEKPSDEQKQEVANKTKLALQKILSKQIAQSQPKSAVVQQRD 179
Query: 182 DSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFKHKRVPRAXXXXXXXXXXXX 241
D YI+Y PS Q S K+R+I+M+ DP+EPPKF+HK+VPR
Sbjct: 180 DPVYIRYTPSNQMGQALS--KQRIIKMVTAEQDPMEPPKFRHKKVPRGPPSPPPPVLHSP 237
Query: 242 XXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALYV 301
+ ++QQDW+IPP ISNWKNPKGYTIPLDKRLAADGRGL DV+IND FAK SEALY
Sbjct: 238 PRKVSAQEQQDWQIPPSISNWKNPKGYTIPLDKRLAADGRGLNDVEINDGFAKFSEALYT 297
Query: 302 AEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSERTGAAPPASVP 353
E++ARE V R+ + LAQKAR +R G +S P
Sbjct: 298 VERQAREEVRYRAIMRQKMAEKEKQEKEQRLFMLAQKAREDRMGRNAASSGP 349
Score = 238 (88.8 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 60/147 (40%), Positives = 83/147 (56%)
Query: 422 KKSKIT-RDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYD 480
K++K+ +DR RD++E+ ALG++ + + M D RLFNQ G+ SGF +D YNVYD
Sbjct: 415 KRAKLAEKDRPRDVAERVALGLSKPSMS--SDTMIDSRLFNQASGLGSGFQDEDSYNVYD 472
Query: 481 KGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRF----KPDKGFAGSSERSG 536
K + A P+ STLYRP + +A ++E+I R+ K F GS E
Sbjct: 473 KP-WRAAPS-STLYRPGATLSRQV---DASAELERITSESRYDVLGNAHKKFKGSDEVVE 527
Query: 537 PRDRPVEFEKEAEEADPFGLDEFLTEV 563
R PV FEK+ ADPFG+D FL V
Sbjct: 528 SRAGPVTFEKDI--ADPFGVDTFLNNV 552
Score = 40 (19.1 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 24/98 (24%), Positives = 34/98 (34%)
Query: 493 LYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEAD 552
L+ + A +D G NA K R S R+G E E E E+++
Sbjct: 328 LFMLAQKAREDRMGRNAASSGPSHAKP-RSTSVSSEERSRSRAGSFSHHSESENEDEDSE 386
Query: 553 PFGL-DEFLTEVKKGGKKALDKVGTGGTMRASAGSSMR 589
F E E ++ +K L G RA R
Sbjct: 387 AFRRRQELRRERRRQAEKDLRLSRMGAEKRAKLAEKDR 424
>DICTYBASE|DDB_G0269188 [details] [associations]
symbol:snwA "nuclear receptor coactivator NC0A-62"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
dictyBase:DDB_G0269188 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:NOG295848 KO:K06063
PANTHER:PTHR12096 EMBL:U43887 RefSeq:XP_646059.1 IntAct:P54705
STRING:P54705 EnsemblProtists:DDB0191206 GeneID:8617007
KEGG:ddi:DDB_G0269188 Uniprot:P54705
Length = 685
Score = 597 (215.2 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 143/366 (39%), Positives = 200/366 (54%)
Query: 2 SLKEILPPVKSNHASFYDHSNDMWF----KNLYNSSEKEKSLEAKRKP---VPPYLKRQG 54
SL +LP K+ +++ D F K ++++ E KP +P Y R+G
Sbjct: 3 SLSSLLPKPKNVYSN---EEEDPLFQPKPKPQQQKQQQQQQQELNDKPKKVIPTYGNRKG 59
Query: 55 FVPRKIEDFGDGGAFPEIHIGQYPLDMGRN-KSGKPGSN------------ILPVSVDAH 101
++P+ IEDFGDGGAFPEIHI QYPLDMGR KS SN I+PVSVD+
Sbjct: 60 YLPKNIEDFGDGGAFPEIHIVQYPLDMGRKGKSKSSNSNTSNMNGGGTTTSIVPVSVDST 119
Query: 102 GNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQETKACLE 161
G V ++AI+ + K ++SQ+KDLIPK T TK LE
Sbjct: 120 GRVKHEAILGE----KGSLHSQYKDLIPK----QHTEHELQRPDDDELQETLDRTKNALE 171
Query: 162 KVVNVKLSAAQPKN-VPQQSSDSKYIKYKPSQQSVAFNSGA-KERVIRMMEMPVDPLEPP 219
K+VN K+ +++ N V + + YIKY PS Q + N A +++RM+++ DPLEPP
Sbjct: 172 KIVNGKIKSSKSTNYVEVEKKSATYIKYTPSNQLGSNNGSALNSKIVRMVDVAQDPLEPP 231
Query: 220 KFKHKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAAD 279
K+K K+ +V+DQQDW IPPC+SNWKNPKG+ I +DKRL ++
Sbjct: 232 KYKIKKKIMEHGSPPAPVMHSPTRKLSVQDQQDWTIPPCVSNWKNPKGFAISIDKRLVSN 291
Query: 280 GRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKA 339
G GLQDV+IND FA ++ALY+AE ARE V+ R+++ LA+
Sbjct: 292 GGGLQDVEINDKFAHFTQALYIAESNAREEVSARAELERKLAQKEKERKQDMLRKLAEDV 351
Query: 340 RSERTG 345
R+ER+G
Sbjct: 352 RNERSG 357
Score = 277 (102.6 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 67/154 (43%), Positives = 92/154 (59%)
Query: 419 AMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNV 478
A GKKSK RD+DRDISEK ALG AS R + +YDQRLFNQ + + SGF DD YNV
Sbjct: 539 ASGKKSKFNRDQDRDISEKIALGQASI--KRTEDSIYDQRLFNQSESLTSGFGNDDSYNV 596
Query: 479 YDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRF------------KPDK 526
Y K LF + +++YRPK + +D+ ++ ++ RF +P+K
Sbjct: 597 YSKPLFGGAVS-NSIYRPKSNQEDNT-------SIQDVLSNSRFGKEGGSGSGGVPRPNK 648
Query: 527 GFAGSSERSGPRDRPVEFEKEAEEAD-PFGLDEF 559
F+G+ +RS R PV FEKE +++D PFG D+F
Sbjct: 649 EFSGT-DRSKDRTGPVAFEKEKKKSDDPFGFDDF 681
>UNIPROTKB|G3V4X8 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0005634
GO:GO:0000785 GO:GO:0005681 GO:GO:0000398 PANTHER:PTHR12096
EMBL:AC008372 HGNC:HGNC:16696 Ensembl:ENST00000554775
ArrayExpress:G3V4X8 Bgee:G3V4X8 Uniprot:G3V4X8
Length = 374
Score = 496 (179.7 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 98/174 (56%), Positives = 120/174 (68%)
Query: 173 PKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFK-HKRVPRAXX 231
P + + ++YI+Y PSQQ VAFNSGAK+RVIRM+EM DP+EPP+FK +K++PR
Sbjct: 2 PVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPP 61
Query: 232 XXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDN 291
TVK+QQ+WKIPPCISNWKN KGYTIPLDKRLAADGRGLQ V IN+N
Sbjct: 62 SPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINEN 121
Query: 292 FAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSERTG 345
FAKL+EALY+A++KAREAV MR++V +AQKAR R G
Sbjct: 122 FAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAG 175
Score = 341 (125.1 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 77/155 (49%), Positives = 100/155 (64%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQ 475
AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+
Sbjct: 210 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEI 267
Query: 476 YNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERS 535
YNVYD+ + ++YRP K+ D DMYG + +E +KT+RF PDK F+GS R
Sbjct: 268 YNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG----DDLEARIKTNRFVPDKEFSGSDRRQ 323
Query: 536 GPRDRPVEFEKEAEEADPFGLDEFLTEVKK-GGKK 569
R+ PV+FE+ DPFGLD+FL E K+ GG K
Sbjct: 324 RGREGPVQFEE-----DPFGLDKFLEEAKQHGGSK 353
Score = 50 (22.7 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 26/105 (24%), Positives = 37/105 (35%)
Query: 447 AARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 506
A RGG+ M Q ++ K +D DD F S +D G
Sbjct: 274 AWRGGKDMA-QSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFS-------GSDRRQRG 325
Query: 507 GNADEQMEKI-MKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEE 550
Q E+ D+F + G S+R RP E E E ++
Sbjct: 326 REGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKK 370
>ZFIN|ZDB-GENE-030131-571 [details] [associations]
symbol:snw1 "SNW domain containing 1" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
ZFIN:ZDB-GENE-030131-571 GO:GO:0005681 GO:GO:0000398
eggNOG:NOG295848 PANTHER:PTHR12096 HOVERGEN:HBG047516
OrthoDB:EOG4RBQJG EMBL:BC133122 IPI:IPI00844850 UniGene:Dr.31414
PRIDE:A3KMS7 HOGENOM:HOG000205224 InParanoid:A3KMS7 Bgee:A3KMS7
Uniprot:A3KMS7
Length = 558
Score = 775 (277.9 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 155/312 (49%), Positives = 204/312 (65%)
Query: 38 SLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNILPVS 97
+L + R+ PPY R+ +VPR +EDFGDGGAFPEIH+ QYPL+MGR K SN L V
Sbjct: 33 ALVSTRRDPPPYGFRKSWVPRALEDFGDGGAFPEIHVAQYPLEMGRKKRT---SNALAVQ 89
Query: 98 VDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXXXXXXXXXXTTQETK 157
VDA G + YDAI +Q ++ K+++S++ D++PK + N T ++T+
Sbjct: 90 VDAEGKIKYDAIARQGQSKDKVIFSKYTDMLPKEVLNQDDPELQKPDEEAVRELT-EKTR 148
Query: 158 ACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLE 217
LEK V+ K++AA P + + ++YI+Y PSQQ +AFNSGAK+RVIRM+EM DP+E
Sbjct: 149 LALEKQVSQKIAAAMPVRAADKQAPAQYIRYTPSQQGLAFNSGAKQRVIRMVEMQKDPME 208
Query: 218 PPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKGYTIPLDKRL 276
PP+FK +K++PR TVK+QQ+WKIPPCISNWKN KGYTIPLDKRL
Sbjct: 209 PPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRL 268
Query: 277 AADGRGLQDVQINDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXXXXXXXXXXALA 336
AADGRGLQ V IN+NFAKL+EALY+A++KAREAV MR++V LA
Sbjct: 269 AADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVEKKMAQKEKEKKEEKLRELA 328
Query: 337 QKARSERTGAAP 348
+ AR R G P
Sbjct: 329 KMARDRRAGIKP 340
Score = 39 (18.8 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 18/78 (23%), Positives = 30/78 (38%)
Query: 416 KDAAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQ 475
K+ + + +K+ RDR I G + E+ +D+R Q S A D +
Sbjct: 320 KEEKLRELAKMARDRRAGIKPHGDKGGEDSEVRERDEIRHDRRKDRQHDRNISRAAPDKR 379
Query: 476 YNVYDKGLFTAQPTLSTL 493
+ +G T S L
Sbjct: 380 CRSF-RGTKTGTSVSSLL 396
>GENEDB_PFALCIPARUM|PFB0875c [details] [associations]
symbol:PFB0875c "Chromatin-binding protein,
putative" species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0005681 GO:GO:0000398 KO:K06063 PANTHER:PTHR12096
EMBL:AE001362 RefSeq:XP_001349691.2 ProteinModelPortal:O96267
EnsemblProtists:PFB0875c:mRNA GeneID:812773 KEGG:pfa:PFB0875c
EuPathDB:PlasmoDB:PF3D7_0218700 HOGENOM:HOG000284302
ProtClustDB:CLSZ2432919 Uniprot:O96267
Length = 482
Score = 456 (165.6 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 114/339 (33%), Positives = 171/339 (50%)
Query: 18 YDHSNDMW-FKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQ 76
YD N++ FK NS +K++ ++ K+ YLKR+ EDF GGA+PEIH+ Q
Sbjct: 16 YDDENELHDFKESNNSIKKKEEIK-KKNQCYEYLKRRHLRITCNEDFQGGGAYPEIHMNQ 74
Query: 77 YPLDMGRNKSGKPGSNILPVSVDAHGNVAYDAIVKQ-----NENSKKIVYSQHKDLI--P 129
YP ++G K +NI+ +D + NV YD ++ Q N KI ++ + +
Sbjct: 75 YPNNIGLKSDNK--NNIVLKYIDENNNVKYDNLINQQIHIYNNEIDKIEPNERINKLRKK 132
Query: 130 KFL-----RNXXXXXXXXXXXXXXXXXTTQETKACLEKVVNVKLSAAQPKNVPQQSSDSK 184
K L R + TK +E ++N KL+ + N + K
Sbjct: 133 KILSDTKDREEKYNEPTYKPNNDEENEIIENTKRNIENILNEKLNKSNIVN----KKEEK 188
Query: 185 YIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFKHKRVPRAXXXXXXXXXXXXXXX 244
Y +Y P + N+ +ER+I+++E DPL+ KFKHK++P
Sbjct: 189 YYRYIPQNK---LNNNLEERIIKIVEKGTDPLDVSKFKHKKLPNIKNSPDYPILRSPTRK 245
Query: 245 XTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALYVAEQ 304
+++ DWKIPPC+SNWKN KGY IPLDKR+ +D + L +V +N+NFA LSE LYVAE+
Sbjct: 246 LNKEEENDWKIPPCVSNWKNNKGYNIPLDKRIQSDNKKLNNVVVNENFAHLSEYLYVAEK 305
Query: 305 KAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSER 343
KARE + +R+ V LA +AR E+
Sbjct: 306 KAREEIQIRNSVMKQKKLKEKEEKENVLKNLAIQARKEK 344
Score = 61 (26.5 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 540 RPVEFEKEAEEADPFGLDEFLTEVKK 565
+PV++ K+ +DPFGLD L++ KK
Sbjct: 458 QPVKYIKDI--SDPFGLDSLLSQAKK 481
Score = 58 (25.5 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 425 KITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFN-QEKGMDSGFATDDQYNVYDKGL 483
K+ +R + E+ AL + ++ + +D LFN E+ + DD Y +YD L
Sbjct: 371 KMKNYENRYVEEQIALNKVNV--SKNNNI-HDITLFNINEQNNVTTTQDDDTYQIYDTAL 427
Query: 484 F 484
F
Sbjct: 428 F 428
>UNIPROTKB|O96267 [details] [associations]
symbol:PFB0875c "Chromatin-binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
GO:GO:0005681 GO:GO:0000398 KO:K06063 PANTHER:PTHR12096
EMBL:AE001362 RefSeq:XP_001349691.2 ProteinModelPortal:O96267
EnsemblProtists:PFB0875c:mRNA GeneID:812773 KEGG:pfa:PFB0875c
EuPathDB:PlasmoDB:PF3D7_0218700 HOGENOM:HOG000284302
ProtClustDB:CLSZ2432919 Uniprot:O96267
Length = 482
Score = 456 (165.6 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 114/339 (33%), Positives = 171/339 (50%)
Query: 18 YDHSNDMW-FKNLYNSSEKEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQ 76
YD N++ FK NS +K++ ++ K+ YLKR+ EDF GGA+PEIH+ Q
Sbjct: 16 YDDENELHDFKESNNSIKKKEEIK-KKNQCYEYLKRRHLRITCNEDFQGGGAYPEIHMNQ 74
Query: 77 YPLDMGRNKSGKPGSNILPVSVDAHGNVAYDAIVKQ-----NENSKKIVYSQHKDLI--P 129
YP ++G K +NI+ +D + NV YD ++ Q N KI ++ + +
Sbjct: 75 YPNNIGLKSDNK--NNIVLKYIDENNNVKYDNLINQQIHIYNNEIDKIEPNERINKLRKK 132
Query: 130 KFL-----RNXXXXXXXXXXXXXXXXXTTQETKACLEKVVNVKLSAAQPKNVPQQSSDSK 184
K L R + TK +E ++N KL+ + N + K
Sbjct: 133 KILSDTKDREEKYNEPTYKPNNDEENEIIENTKRNIENILNEKLNKSNIVN----KKEEK 188
Query: 185 YIKYKPSQQSVAFNSGAKERVIRMMEMPVDPLEPPKFKHKRVPRAXXXXXXXXXXXXXXX 244
Y +Y P + N+ +ER+I+++E DPL+ KFKHK++P
Sbjct: 189 YYRYIPQNK---LNNNLEERIIKIVEKGTDPLDVSKFKHKKLPNIKNSPDYPILRSPTRK 245
Query: 245 XTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALYVAEQ 304
+++ DWKIPPC+SNWKN KGY IPLDKR+ +D + L +V +N+NFA LSE LYVAE+
Sbjct: 246 LNKEEENDWKIPPCVSNWKNNKGYNIPLDKRIQSDNKKLNNVVVNENFAHLSEYLYVAEK 305
Query: 305 KAREAVAMRSKVXXXXXXXXXXXXXXXXXALAQKARSER 343
KARE + +R+ V LA +AR E+
Sbjct: 306 KAREEIQIRNSVMKQKKLKEKEEKENVLKNLAIQARKEK 344
Score = 61 (26.5 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 540 RPVEFEKEAEEADPFGLDEFLTEVKK 565
+PV++ K+ +DPFGLD L++ KK
Sbjct: 458 QPVKYIKDI--SDPFGLDSLLSQAKK 481
Score = 58 (25.5 bits), Expect = 9.7e-53, Sum P(3) = 9.7e-53
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 425 KITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFN-QEKGMDSGFATDDQYNVYDKGL 483
K+ +R + E+ AL + ++ + +D LFN E+ + DD Y +YD L
Sbjct: 371 KMKNYENRYVEEQIALNKVNV--SKNNNI-HDITLFNINEQNNVTTTQDDDTYQIYDTAL 427
Query: 484 F 484
F
Sbjct: 428 F 428
>UNIPROTKB|G3V5R3 [details] [associations]
symbol:SNW1 "SNW domain-containing protein 1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731 GO:GO:0005681
GO:GO:0000398 PANTHER:PTHR12096 EMBL:AC008372 HGNC:HGNC:16696
Ensembl:ENST00000554324 ArrayExpress:G3V5R3 Bgee:G3V5R3
Uniprot:G3V5R3
Length = 185
Score = 285 (105.4 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 51/100 (51%), Positives = 72/100 (72%)
Query: 35 KEKSLEAKRKPVPPYLKRQGFVPRKIEDFGDGGAFPEIHIGQYPLDMGRNKSGKPGSNIL 94
++ SL + R+ PPY R+G++PR +EDFGDGGAFPEIH+ QYPLDMGR K SN L
Sbjct: 30 RQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKM---SNAL 86
Query: 95 PVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRN 134
+ VD+ G + YDAI +Q ++ K++YS++ DL+PK + N
Sbjct: 87 AIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMN 126
Score = 207 (77.9 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 246 TVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDV 286
TVK+QQ+WKIPPCISNWKN KGYTIPLDKRLAADGRGLQ V
Sbjct: 144 TVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTV 184
>SGD|S000000030 [details] [associations]
symbol:PRP45 "Protein required for pre-mRNA splicing"
species:4932 "Saccharomyces cerevisiae" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0000350 "generation of catalytic spliceosome for
second transesterification step" evidence=IGI;IMP] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IC] [GO:0000384 "first
spliceosomal transesterification activity" evidence=IC] [GO:0071014
"post-mRNA release spliceosomal complex" evidence=IDA] [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] [GO:0071006 "U2-type
catalytic step 1 spliceosome" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR004015 InterPro:IPR017862
Pfam:PF02731 SGD:S000000030 EMBL:BK006935 EMBL:U12980
eggNOG:NOG295848 GeneTree:ENSGT00390000010423 KO:K06063
PANTHER:PTHR12096 GO:GO:0071006 GO:GO:0071007 EMBL:X62577
GO:GO:0071014 GO:GO:0000350 OrthoDB:EOG4FJCK5 PIR:S23409
RefSeq:NP_009370.1 ProteinModelPortal:P28004 DIP:DIP-2774N
IntAct:P28004 MINT:MINT-409776 STRING:P28004 PaxDb:P28004
EnsemblFungi:YAL032C GeneID:851201 KEGG:sce:YAL032C CYGD:YAL032c
HOGENOM:HOG000074697 OMA:NWKNPNG NextBio:968058
Genevestigator:P28004 GermOnline:YAL032C Uniprot:P28004
Length = 379
Score = 185 (70.2 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 60/215 (27%), Positives = 101/215 (46%)
Query: 153 TQETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYKPSQQSVAFNSGAKERVIRMMEMP 212
T TK+ ++++VN KL+ N ++S S+Y+ + Q+ A I ++
Sbjct: 67 TARTKSYIQRLVNAKLA-----NSNNRAS-SRYVT--ETHQAPANLLLNNSHHIEVVSKQ 118
Query: 213 VDPLEPPKF---KHKRV--PRAXXXXXXXXXXXXXXXXTVKDQQDWKIPPCISNWKNPKG 267
+DPL P +F K ++V P D +WKIP +SNWKNP G
Sbjct: 119 MDPLLP-RFVGKKARKVVAPTENDEVVPVLHMDGSNDRGEADPNEWKIPAAVSNWKNPNG 177
Query: 268 YTIPLDKRLAADGRGLQDVQ--INDNFAKLSEALYVAEQKAREAVAMRSKVXXXXXXXXX 325
YT+ L++R+ G+ L + IND F KLSEAL A++KAR+ + + ++
Sbjct: 178 YTVALERRV---GKALDNENNTINDGFMKLSEALENADKKARQEIRSKMELKRLAMEQEM 234
Query: 326 XXXXXXXXALAQKARSERTGAAPPASVPIPSEKSA 360
L+Q+AR G ++ P ++++
Sbjct: 235 LAKESKLKELSQRARYHN-GTPQTGAIVKPKKQTS 268
Score = 78 (32.5 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 418 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYN 477
+ + + ++ + RD+SEK LG A + ++ YD R F + S +DQ
Sbjct: 268 STVARLKELAYSQGRDVSEKIILGAAKR--SEQPDLQYDSRFFTRGANA-SAKRHEDQ-- 322
Query: 478 VYDKGLFTAQPTLSTLYRPKKDADDD 503
VYD LF Q + ++Y+ + D+
Sbjct: 323 VYDNPLFVQQD-IESIYKTNYEKLDE 347
Score = 65 (27.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 28/111 (25%), Positives = 49/111 (44%)
Query: 448 ARGGEVMYDQRLFNQEKGMDSGFATDDQYNV-YDKGLFTAQPTLSTLYRPKKDADDDMYG 506
AR E+ Y Q EK + +Q ++ YD FT S + D+ ++
Sbjct: 271 ARLKELAYSQGRDVSEKIILGAAKRSEQPDLQYDSRFFTRGANASAKRHEDQVYDNPLF- 329
Query: 507 GNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEK-EAEE-ADPFG 555
+ +E I KT+ K D+ SE + P++F K E+++ +D +G
Sbjct: 330 --VQQDIESIYKTNYEKLDEAVNVKSEGASGSHGPIQFTKAESDDKSDNYG 378
>CGD|CAL0006088 [details] [associations]
symbol:orf19.5513 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0071007 "U2-type catalytic
step 2 spliceosome" evidence=IEA] [GO:0071006 "U2-type catalytic
step 1 spliceosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] InterPro:IPR004015 InterPro:IPR017862 Pfam:PF02731
CGD:CAL0006088 GO:GO:0005681 GO:GO:0000398 EMBL:AACQ01000034
EMBL:AACQ01000033 eggNOG:NOG295848 KO:K06063 PANTHER:PTHR12096
RefSeq:XP_719078.1 RefSeq:XP_719195.1 GeneID:3639050 GeneID:3639166
KEGG:cal:CaO19.12959 KEGG:cal:CaO19.5513 Uniprot:Q5AC37
Length = 286
Score = 206 (77.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 64/246 (26%), Positives = 111/246 (45%)
Query: 84 NKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXX 143
N S P + PV+ + + + +V +N+ + S++ IP L+
Sbjct: 26 NSSYDPSYHFSPVTREIKNDPTSNGVVSTTKNATPLAPSKYDTTIP--LKKRYPNLVHNF 83
Query: 144 XXXXXXXXTTQETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYK-----------PSQ 192
ETK ++ ++N P + P ++D YIKY+ P+Q
Sbjct: 84 PKPELDENVILETKKIIDSILN-------PSDEP--TNDINYIKYENPNPNPNPNPNPNQ 134
Query: 193 QSVAFNSGAKERVIRMMEMPVDPLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQ 251
+ +S + ++I++ + DP+ PPKFK K T +D++
Sbjct: 135 EQQQQSSSSSSKIIQIKQFQEDPMLPPKFKLRKNRHERIIEDVTFVKDLKTKKLTKEDRE 194
Query: 252 DWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQIN-DNFAKLSEALYVAEQKAREAV 310
W IP +SNWKN +G+TI LDKR+ GR +++N + F LS AL A+ +ARE +
Sbjct: 195 FWNIPAAVSNWKNSQGFTIGLDKRMI--GREHVPIEMNIEKFNDLSTALSDADLQAREDL 252
Query: 311 AMRSKV 316
R+++
Sbjct: 253 KQRNEI 258
>UNIPROTKB|Q5AC37 [details] [associations]
symbol:PRP45 "Pre-mRNA-processing protein 45"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004015
InterPro:IPR017862 Pfam:PF02731 CGD:CAL0006088 GO:GO:0005681
GO:GO:0000398 EMBL:AACQ01000034 EMBL:AACQ01000033 eggNOG:NOG295848
KO:K06063 PANTHER:PTHR12096 RefSeq:XP_719078.1 RefSeq:XP_719195.1
GeneID:3639050 GeneID:3639166 KEGG:cal:CaO19.12959
KEGG:cal:CaO19.5513 Uniprot:Q5AC37
Length = 286
Score = 206 (77.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 64/246 (26%), Positives = 111/246 (45%)
Query: 84 NKSGKPGSNILPVSVDAHGNVAYDAIVKQNENSKKIVYSQHKDLIPKFLRNXXXXXXXXX 143
N S P + PV+ + + + +V +N+ + S++ IP L+
Sbjct: 26 NSSYDPSYHFSPVTREIKNDPTSNGVVSTTKNATPLAPSKYDTTIP--LKKRYPNLVHNF 83
Query: 144 XXXXXXXXTTQETKACLEKVVNVKLSAAQPKNVPQQSSDSKYIKYK-----------PSQ 192
ETK ++ ++N P + P ++D YIKY+ P+Q
Sbjct: 84 PKPELDENVILETKKIIDSILN-------PSDEP--TNDINYIKYENPNPNPNPNPNPNQ 134
Query: 193 QSVAFNSGAKERVIRMMEMPVDPLEPPKFK-HKRVPRAXXXXXXXXXXXXXXXXTVKDQQ 251
+ +S + ++I++ + DP+ PPKFK K T +D++
Sbjct: 135 EQQQQSSSSSSKIIQIKQFQEDPMLPPKFKLRKNRHERIIEDVTFVKDLKTKKLTKEDRE 194
Query: 252 DWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQIN-DNFAKLSEALYVAEQKAREAV 310
W IP +SNWKN +G+TI LDKR+ GR +++N + F LS AL A+ +ARE +
Sbjct: 195 FWNIPAAVSNWKNSQGFTIGLDKRMI--GREHVPIEMNIEKFNDLSTALSDADLQAREDL 252
Query: 311 AMRSKV 316
R+++
Sbjct: 253 KQRNEI 258
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 765 652 0.00095 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 618 (66 KB)
Total size of DFA: 340 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.40u 0.12s 53.52t Elapsed: 00:00:03
Total cpu time: 53.41u 0.12s 53.53t Elapsed: 00:00:03
Start: Fri May 10 07:47:50 2013 End: Fri May 10 07:47:53 2013