Query 045842
Match_columns 765
No_of_seqs 177 out of 215
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 10:15:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045842.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045842hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tola2 d.212.1.1 (A:125-216) 19.9 13 0.00094 30.3 0.6 44 250-300 17-60 (92)
2 d3coxa2 d.16.1.1 (A:319-450) C 17.8 18 0.0013 32.1 1.0 43 60-109 30-75 (132)
3 d1tiha_ g.69.1.1 (A:) Multidom 11.9 38 0.0028 25.7 1.3 19 259-277 28-46 (53)
4 d1wmta_ g.3.7.2 (A:) Istx {Sco 11.1 15 0.0011 26.4 -1.2 20 652-671 18-37 (41)
5 d1tnsa_ a.6.1.7 (A:) mu transp 11.0 58 0.0043 26.1 2.3 29 50-79 27-55 (76)
6 d4sgbi_ g.69.1.1 (I:) Plant ch 11.0 39 0.0029 25.6 1.1 18 260-277 28-45 (51)
7 d1qpma_ a.6.1.7 (A:) mu transp 9.8 30 0.0022 27.5 0.1 28 51-79 28-55 (69)
8 d1sa0e_ a.137.10.1 (E:) Stathm 8.3 4.2E+02 0.031 22.1 7.2 18 234-251 30-48 (138)
9 d1v9da_ a.207.1.1 (A:) Diaphan 8.0 2.9E+02 0.021 26.0 6.6 21 143-163 204-224 (332)
10 d1pjua1 g.69.1.1 (A:16-74) Wou 7.1 52 0.0038 25.4 0.4 18 260-277 37-54 (59)
No 1
>d1tola2 d.212.1.1 (A:125-216) TolA {Escherichia coli [TaxId: 562]}
Probab=19.92 E-value=13 Score=30.27 Aligned_cols=44 Identities=20% Similarity=0.190 Sum_probs=28.8
Q ss_pred cccccCCCccccCCCCCCcccccchhhhhcCCCCCccccchhHHHHHHHHH
Q 045842 250 QQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALY 300 (765)
Q Consensus 250 Qq~WkIPPcISNWKNpKGYTIpLDKRLAADGRgLq~v~INDkFA~LSEALy 300 (765)
|+.|..|+.++++ +.-|.=+|..||+= ..+.+..+-..|-+|..
T Consensus 17 ~~~w~~p~~~~g~------~~~v~i~l~~~G~v-~~v~~sSG~~~fd~sa~ 60 (92)
T d1tola2 17 ESKFYDASSYAGK------TCTLRIKLAPDGML-LDIKPEGGDPALCQAAL 60 (92)
T ss_dssp HTTCTTGGGGTTC------CEEEEEEECTTSCE-EEEEEEEECHHHHHHHH
T ss_pred HHhcCCCcccCCC------EEEEEEEEeCCccE-EEeEecCCCHHHHHHHH
Confidence 5689999998765 46677788888873 45666544444444433
No 2
>d3coxa2 d.16.1.1 (A:319-450) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]}
Probab=17.82 E-value=18 Score=32.11 Aligned_cols=43 Identities=21% Similarity=0.383 Sum_probs=30.4
Q ss_pred cccCCCCCC--CCccccccCCCcCCCCCCCCCCCCcceEEeC-CCCCcchHHH
Q 045842 60 IEDFGDGGA--FPEIHIGQYPLDMGRNKSGKPGSNILPVSVD-AHGNVAYDAI 109 (765)
Q Consensus 60 ~eDFgDGGA--FPEIhvAQYPL~MG~k~~~~~~sn~lalqvD-~~GkV~YDaI 109 (765)
.+|+.++++ |-| +|..|++++.. .+-.|++.++ +.|...||+-
T Consensus 30 I~~wd~p~~P~~~e--~aPlP~~~~~~-----~s~~l~it~~p~RG~f~YD~a 75 (132)
T d3coxa2 30 IDNWADPTAPIFAE--IAPLPAGLETY-----VSLYLAITKNPERARFQFNSG 75 (132)
T ss_dssp EECTTCTTSCEEEE--EECCCCSSCCC-----EEEEEEEECCCCCBCEEEETT
T ss_pred EeccCCCCCceeEE--ecCCCCCcccc-----eEEEEEEecCCCceEEEecCC
Confidence 567888888 877 66778777532 3445777764 5699999964
No 3
>d1tiha_ g.69.1.1 (A:) Multidomain proteinase inhibitor {Winged tobacco (Nicotiana alata) [TaxId: 4087]}
Probab=11.85 E-value=38 Score=25.75 Aligned_cols=19 Identities=37% Similarity=0.410 Sum_probs=16.3
Q ss_pred cccCCCCCCcccccchhhh
Q 045842 259 ISNWKNPKGYTIPLDKRLA 277 (765)
Q Consensus 259 ISNWKNpKGYTIpLDKRLA 277 (765)
-|.|+|||.-+---|-|+|
T Consensus 28 esdp~nPK~Cp~nCD~rIa 46 (53)
T d1tiha_ 28 ESDPRNPKACPRNCDPRIA 46 (53)
T ss_dssp CCCSSSSCCCTTCCCTTCC
T ss_pred CCCCCCCCcCCccCCCcee
Confidence 3889999999988888876
No 4
>d1wmta_ g.3.7.2 (A:) Istx {Scorpion (Opisthacanthus madagascariensis) [TaxId: 167108]}
Probab=11.07 E-value=15 Score=26.40 Aligned_cols=20 Identities=50% Similarity=0.966 Sum_probs=17.7
Q ss_pred ccccccchhhHhhcCcccee
Q 045842 652 ETKKNCSRWACMLRGCASYS 671 (765)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~ 671 (765)
|.|-||.|-.||-|-|.-|.
T Consensus 18 ekkyncarakcmnrhcncyn 37 (41)
T d1wmta_ 18 EKKYNCARAKCMNRHCNCYN 37 (41)
T ss_dssp HHTTSCCCCEEETTEEECCC
T ss_pred HHhhchHHHHHhhhhccccc
Confidence 56889999999999998874
No 5
>d1tnsa_ a.6.1.7 (A:) mu transposase, DNA-binding domain {Bacteriophage mu [TaxId: 10677]}
Probab=10.96 E-value=58 Score=26.10 Aligned_cols=29 Identities=28% Similarity=0.449 Sum_probs=23.0
Q ss_pred cccCCCccCCcccCCCCCCCCccccccCCC
Q 045842 50 LKRQGFVPRKIEDFGDGGAFPEIHIGQYPL 79 (765)
Q Consensus 50 g~R~gw~Pr~~eDFgDGGAFPEIhvAQYPL 79 (765)
.+|.||.=|..+==|.|+|| |.||.=.|.
T Consensus 27 Akre~W~~Rkr~G~~gGk~~-EYhissLP~ 55 (76)
T d1tnsa_ 27 AKKQGWQNRTRAGVKGGKAI-EYNANSLPV 55 (76)
T ss_dssp HHTTCCCCCCCTTSSSSCCC-CEETTTSCH
T ss_pred HHhCchhhhcccccCCCceE-EEehhhCCH
Confidence 36789988877766667899 999988775
No 6
>d4sgbi_ g.69.1.1 (I:) Plant chymotrypsin inhibitor {Potato tuber (Solanum tuberosum) [TaxId: 4113]}
Probab=10.96 E-value=39 Score=25.56 Aligned_cols=18 Identities=33% Similarity=0.456 Sum_probs=15.9
Q ss_pred ccCCCCCCcccccchhhh
Q 045842 260 SNWKNPKGYTIPLDKRLA 277 (765)
Q Consensus 260 SNWKNpKGYTIpLDKRLA 277 (765)
|.|+|||.-+.--|-|+|
T Consensus 28 Sdp~npkaCp~nCD~rIa 45 (51)
T d4sgbi_ 28 SDPKKPKACPLNCDPHIA 45 (51)
T ss_dssp BCTTSCCCEECCBCTTCC
T ss_pred CCCCCCCcCCccCCCccc
Confidence 789999999988888876
No 7
>d1qpma_ a.6.1.7 (A:) mu transposase, DNA-binding domain {Bacteriophage mu [TaxId: 10677]}
Probab=9.76 E-value=30 Score=27.46 Aligned_cols=28 Identities=32% Similarity=0.440 Sum_probs=22.7
Q ss_pred ccCCCccCCcccCCCCCCCCccccccCCC
Q 045842 51 KRQGFVPRKIEDFGDGGAFPEIHIGQYPL 79 (765)
Q Consensus 51 ~R~gw~Pr~~eDFgDGGAFPEIhvAQYPL 79 (765)
+|.||.=|.-+==+.||+| |.||.=.|.
T Consensus 28 kre~W~~Rkr~G~~~G~~~-EYhissLP~ 55 (69)
T d1qpma_ 28 NVQGWTKRKKEGVKGGKAV-EYDVMSMPT 55 (69)
T ss_dssp HHTTCCEEEESCSSSSCEE-EECGGGSCH
T ss_pred HhCCchhccccccCCCceE-EEehhhCCH
Confidence 5689988777666678999 999998885
No 8
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.30 E-value=4.2e+02 Score=22.11 Aligned_cols=18 Identities=22% Similarity=0.250 Sum_probs=3.8
Q ss_pred CCCcccCCCCC-CCccccc
Q 045842 234 PVPVMHSPPRP-VTVKDQQ 251 (765)
Q Consensus 234 P~PVLHSPpRK-lTkeEQq 251 (765)
|.+.+-||.++ +|.++.+
T Consensus 30 ~~~~~s~p~rk~~s~ee~q 48 (138)
T d1sa0e_ 30 PEFNASLPRRRDPSLEEIQ 48 (138)
T ss_dssp ------------CCCSSTT
T ss_pred CcCCCCCCCCccchHHHHH
Confidence 33344455443 6665544
No 9
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.02 E-value=2.9e+02 Score=25.95 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=14.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHH
Q 045842 143 EEMQREIDETTQETKACLEKV 163 (765)
Q Consensus 143 rPseEei~etterTK~ALEkl 163 (765)
+-+-+++...++..+..+..+
T Consensus 204 k~~~~~l~~~~~~l~~~l~~~ 224 (332)
T d1v9da_ 204 RVSAENLQKSLDQMKKQIADV 224 (332)
T ss_dssp HCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHH
Confidence 446677777777777777665
No 10
>d1pjua1 g.69.1.1 (A:16-74) Wound-induced proteinase inhibitor-II {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=7.11 E-value=52 Score=25.44 Aligned_cols=18 Identities=33% Similarity=0.409 Sum_probs=14.8
Q ss_pred ccCCCCCCcccccchhhh
Q 045842 260 SNWKNPKGYTIPLDKRLA 277 (765)
Q Consensus 260 SNWKNpKGYTIpLDKRLA 277 (765)
|.|+|||.-+---|-|+|
T Consensus 37 sdp~npkaCp~nCD~rIa 54 (59)
T d1pjua1 37 SDPKRPNACTFNCDPNIA 54 (59)
T ss_dssp BBTTBCCEECSCCCTTCC
T ss_pred CCCCCCCcCCccCCCccc
Confidence 788999988887777776
Done!