BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045849
(320 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
Length = 432
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/320 (72%), Positives = 268/320 (83%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A
Sbjct: 11 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIA 70
Query: 61 EXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+ IHH TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+F
Sbjct: 71 KGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTF 130
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS
Sbjct: 131 GLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 190
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEI+F PEI ET PFKP+S+RYHVPY AS ST+PFWYSIKRAS +IIVL
Sbjct: 191 AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVL 250
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYG+ TPQY WL++EL KV RSETPWLIVLMH+P YNSYN+H+MEGE MR +E W
Sbjct: 251 SSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAW 310
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 311 FVKYKVDVVFAGHVHAYERS 330
>pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DT2|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DHL|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
Length = 426
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/320 (72%), Positives = 268/320 (83%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A
Sbjct: 5 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIA 64
Query: 61 EXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+ IHH TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+F
Sbjct: 65 KGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTF 124
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS
Sbjct: 125 GLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 184
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEI+F PEI ET PFKP+S+RYHVPY AS ST+PFWYSIKRAS +IIVL
Sbjct: 185 AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVL 244
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYG+ TPQY WL++EL KV RSETPWLIVLMH+P YNSYN+H+MEGE MR +E W
Sbjct: 245 SSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAW 304
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 305 FVKYKVDVVFAGHVHAYERS 324
>pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFR|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase With Bound Sulfate
pdb|2QFR|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase With Bound Sulfate
Length = 424
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/320 (72%), Positives = 268/320 (83%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQA 60
MPLD+DVF+VPPGYNAPQQVHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A
Sbjct: 3 MPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIA 62
Query: 61 EXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSF 120
+ IHH TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+F
Sbjct: 63 KGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTF 122
Query: 121 GLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180
GLIGDLGQS+DSN TL+HYE +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS
Sbjct: 123 GLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSV 182
Query: 181 AYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVL 240
AYQPWIWTAGNHEI+F PEI ET PFKP+S+RYHVPY AS ST+PFWYSIKRAS +IIVL
Sbjct: 183 AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVL 242
Query: 241 SSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300
SSYSAYG+ TPQY WL++EL KV RSETPWLIVLMH+P YNSYN+H+MEGE MR +E W
Sbjct: 243 SSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAW 302
Query: 301 LVKYKVDVVFAGHVHAYERS 320
VKYKVDVVFAGHVHAYERS
Sbjct: 303 FVKYKVDVVFAGHVHAYERS 322
>pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
pdb|1XZW|B Chain B, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
Length = 426
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/321 (66%), Positives = 252/321 (78%), Gaps = 1/321 (0%)
Query: 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWSENSEQKEQ 59
MP D+DVF VP GYNAPQQVHITQGD G+ VI+SW T D+ G N V YWSENS+ +++
Sbjct: 9 MPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKR 68
Query: 60 AEXXXXXXXXXXXXXXXIHHCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYS 119
A IHHCTI+ LE++TKYYY +G G +RQFWFVTPP+ GPDVPY
Sbjct: 69 AMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYV 128
Query: 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS 179
FGLIGD+GQ++DSN TLTHYE+N KGQ +LF+GDLSY++ +P HDNNRWDTWGRF ERS
Sbjct: 129 FGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS 188
Query: 180 AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIV 239
AYQPWIWTAGNHEID+ P+IGE PF P+++RY P+ ASGS P WY+IKRAS +IIV
Sbjct: 189 VAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIV 248
Query: 240 LSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEP 299
LSSYS + KY+PQYKW EL KVNRSETPWLIVL+HAP YNSY HYMEGE MR ++EP
Sbjct: 249 LSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEP 308
Query: 300 WLVKYKVDVVFAGHVHAYERS 320
+ V YKVD+VF+GHVH+YERS
Sbjct: 309 YFVYYKVDIVFSGHVHSYERS 329
>pdb|2GKP|A Chain A, Protein Of Unknown Function Nmb0488 From Neisseria
Meningitidis
Length = 167
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 232 RASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNY------ 285
+A+ +++ ++S +G+Y P + + LP +ET VL ++ Y
Sbjct: 17 KANERALIIQTWSGFGRYAPDHLYPPHILPLDTDNETLGTTVLQALANSRTFVYDSPEDQ 76
Query: 286 HYMEGETMRVMYEPWLVK 303
+ + E +R YE W+ K
Sbjct: 77 DFFDTEKIRQRYEDWVAK 94
>pdb|2BQ8|X Chain X, Crystal Structure Of Human Purple Acid Phosphatase With An
Inhibitory Conformation Of The Repression Loop
Length = 304
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 28/159 (17%)
Query: 175 FVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFW---YSIK 231
F +RS PW AGNH D + + + S R++ P +PF+ + I
Sbjct: 73 FSDRSLRKVPWYVLAGNH--DHLGNVSAQIAYSKISKRWNFP-------SPFYRLHFKIP 123
Query: 232 RA--SVYIIVLSSYSAYGKYTPQYKWLEEELP---KVNRSETPWLIVLMHAPW--YNSYN 284
+ SV I +L + + G + + + E P K+ R++ WL + A Y
Sbjct: 124 QTNVSVAIFMLDTVTLCGN-SDDFLSQQPERPRDVKLARTQLSWLKKQLAAAREDYVLVA 182
Query: 285 YHY------MEGETMRVMYE--PWLVKYKVDVVFAGHVH 315
HY G T ++ + P L Y V GH H
Sbjct: 183 GHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDH 221
>pdb|1WAR|A Chain A, Recombinant Human Purple Acid Phosphatase Expressed In
Pichia Pastoris
Length = 310
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 28/159 (17%)
Query: 175 FVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFW---YSIK 231
F +RS PW AGNH D + + + S R++ P +PF+ + I
Sbjct: 79 FSDRSLRKVPWYVLAGNH--DHLGNVSAQIAYSKISKRWNFP-------SPFYRLHFKIP 129
Query: 232 RA--SVYIIVLSSYSAYGKYTPQYKWLEEELP---KVNRSETPWLIVLMHAPW--YNSYN 284
+ SV I +L + + G + + + E P K+ R++ WL + A Y
Sbjct: 130 QTNVSVAIFMLDTVTLCGN-SDDFLSQQPERPRDVKLARTQLSWLKKQLAAAREDYVLVA 188
Query: 285 YHY------MEGETMRVMYE--PWLVKYKVDVVFAGHVH 315
HY G T ++ + P L Y V GH H
Sbjct: 189 GHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDH 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,203,776
Number of Sequences: 62578
Number of extensions: 489019
Number of successful extensions: 1377
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1371
Number of HSP's gapped (non-prelim): 8
length of query: 320
length of database: 14,973,337
effective HSP length: 99
effective length of query: 221
effective length of database: 8,778,115
effective search space: 1939963415
effective search space used: 1939963415
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)