Query 045849
Match_columns 320
No_of_seqs 277 out of 2508
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 06:08:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045849.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045849hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 3.8E-64 8.1E-69 448.6 30.4 308 1-320 29-347 (452)
2 PLN02533 probable purple acid 100.0 2.8E-61 6E-66 444.7 34.7 295 13-320 40-337 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 1.9E-36 4.1E-41 269.8 21.2 201 115-320 2-208 (294)
4 cd07378 MPP_ACP5 Homo sapiens 100.0 2.2E-29 4.9E-34 222.3 16.9 187 118-320 1-216 (277)
5 PTZ00422 glideosome-associated 100.0 5.1E-29 1.1E-33 223.3 17.9 192 115-320 24-263 (394)
6 cd07395 MPP_CSTP1 Homo sapiens 100.0 5.1E-28 1.1E-32 211.9 16.3 191 116-319 3-220 (262)
7 PF09423 PhoD: PhoD-like phosp 99.9 3.1E-26 6.7E-31 215.3 21.0 284 22-317 3-377 (453)
8 KOG2679 Purple (tartrate-resis 99.9 3.4E-25 7.4E-30 183.9 11.0 192 114-319 40-257 (336)
9 cd07396 MPP_Nbla03831 Homo sap 99.9 1.3E-24 2.9E-29 190.5 15.2 181 118-319 1-230 (267)
10 COG3540 PhoD Phosphodiesterase 99.9 3.8E-24 8.2E-29 190.8 16.2 285 20-316 41-417 (522)
11 cd07402 MPP_GpdQ Enterobacter 99.9 4.9E-24 1.1E-28 184.4 15.0 176 119-318 1-195 (240)
12 cd07401 MPP_TMEM62_N Homo sapi 99.9 1.6E-23 3.6E-28 182.1 17.1 186 120-319 2-212 (256)
13 PRK11148 cyclic 3',5'-adenosin 99.9 3.6E-22 7.9E-27 175.9 15.6 185 106-318 5-208 (275)
14 cd07399 MPP_YvnB Bacillus subt 99.9 2.3E-22 5E-27 170.3 13.4 149 118-319 1-163 (214)
15 cd00842 MPP_ASMase acid sphing 99.8 5.1E-21 1.1E-25 170.5 11.0 193 122-318 42-262 (296)
16 cd08163 MPP_Cdc1 Saccharomyces 99.8 5.4E-19 1.2E-23 153.1 14.0 167 135-317 36-228 (257)
17 PF00149 Metallophos: Calcineu 99.8 1.6E-20 3.5E-25 153.3 2.2 190 118-317 1-200 (200)
18 cd07383 MPP_Dcr2 Saccharomyces 99.8 4E-18 8.6E-23 143.1 11.4 148 117-318 2-177 (199)
19 TIGR03729 acc_ester putative p 99.7 7.5E-17 1.6E-21 139.2 12.9 176 119-318 1-222 (239)
20 TIGR03767 P_acnes_RR metalloph 99.7 2.4E-16 5.1E-21 144.0 13.6 92 224-318 290-393 (496)
21 cd07392 MPP_PAE1087 Pyrobaculu 99.7 3.5E-16 7.6E-21 129.9 13.2 166 120-317 1-173 (188)
22 cd07393 MPP_DR1119 Deinococcus 99.7 1.7E-16 3.8E-21 136.1 10.2 174 120-319 1-207 (232)
23 COG1409 Icc Predicted phosphoh 99.6 4.2E-15 9.1E-20 132.4 13.7 179 118-317 1-193 (301)
24 cd07404 MPP_MS158 Microscilla 99.6 4.8E-15 1E-19 120.8 10.7 143 120-317 1-149 (166)
25 cd07388 MPP_Tt1561 Thermus the 99.6 4.1E-14 8.9E-19 119.6 14.6 175 116-315 3-189 (224)
26 cd07400 MPP_YydB Bacillus subt 99.6 1.3E-14 2.9E-19 115.2 10.5 115 120-318 1-126 (144)
27 cd07385 MPP_YkuE_C Bacillus su 99.6 1.1E-14 2.3E-19 124.5 10.2 162 117-318 1-167 (223)
28 cd00840 MPP_Mre11_N Mre11 nucl 99.6 2.4E-14 5.2E-19 122.2 12.3 186 119-318 1-202 (223)
29 TIGR03768 RPA4764 metallophosp 99.5 1.1E-13 2.5E-18 125.3 14.7 91 225-316 292-410 (492)
30 PRK11340 phosphodiesterase Yae 99.5 2.7E-13 5.9E-18 119.0 12.1 160 115-316 47-213 (271)
31 KOG1432 Predicted DNA repair e 99.5 8.1E-13 1.7E-17 114.3 13.8 193 115-317 51-311 (379)
32 cd00838 MPP_superfamily metall 99.4 1E-12 2.2E-17 101.8 11.3 116 121-320 1-118 (131)
33 cd07379 MPP_239FB Homo sapiens 99.3 7.5E-12 1.6E-16 98.3 9.6 116 119-317 1-116 (135)
34 cd08166 MPP_Cdc1_like_1 unchar 99.3 9.2E-12 2E-16 102.2 8.6 106 144-319 41-149 (195)
35 PRK05340 UDP-2,3-diacylglucosa 99.3 1.7E-11 3.7E-16 105.9 9.0 178 118-317 1-199 (241)
36 COG1408 Predicted phosphohydro 99.3 4.8E-11 1E-15 104.6 11.5 84 106-196 33-119 (284)
37 PF12850 Metallophos_2: Calcin 99.2 5E-11 1.1E-15 95.7 8.4 121 118-318 1-122 (156)
38 cd07397 MPP_DevT Myxococcus xa 99.2 2.6E-10 5.5E-15 96.8 12.1 64 118-196 1-64 (238)
39 cd07389 MPP_PhoD Bacillus subt 99.2 2.2E-10 4.7E-15 98.2 11.5 125 119-244 1-167 (228)
40 COG2129 Predicted phosphoester 99.2 1.4E-10 3.1E-15 95.6 9.2 176 116-317 2-187 (226)
41 cd07403 MPP_TTHA0053 Thermus t 99.2 1.6E-10 3.5E-15 89.8 8.5 47 271-318 58-104 (129)
42 KOG3770 Acid sphingomyelinase 99.2 4.3E-10 9.3E-15 104.6 12.5 176 135-316 200-403 (577)
43 COG1768 Predicted phosphohydro 99.2 3E-10 6.6E-15 89.6 9.8 157 134-319 32-201 (230)
44 cd07384 MPP_Cdc1_like Saccharo 99.1 1E-10 2.2E-15 95.3 6.9 59 135-196 36-101 (171)
45 PF14582 Metallophos_3: Metall 99.1 3.6E-10 7.8E-15 93.0 9.0 177 117-316 5-217 (255)
46 cd08165 MPP_MPPE1 human MPPE1 99.1 4E-10 8.8E-15 90.5 7.5 55 138-195 32-89 (156)
47 TIGR00040 yfcE phosphoesterase 99.0 3.2E-09 6.9E-14 85.6 11.8 63 118-194 1-63 (158)
48 cd00841 MPP_YfcE Escherichia c 99.0 1.8E-09 3.9E-14 86.8 8.1 59 119-195 1-59 (155)
49 TIGR01854 lipid_A_lpxH UDP-2,3 99.0 8.1E-09 1.8E-13 88.6 12.5 75 121-195 2-81 (231)
50 cd08164 MPP_Ted1 Saccharomyces 99.0 2.5E-09 5.5E-14 87.7 8.2 59 134-196 34-112 (193)
51 cd00845 MPP_UshA_N_like Escher 98.9 1E-08 2.2E-13 89.2 9.6 173 118-318 1-207 (252)
52 TIGR00583 mre11 DNA repair pro 98.8 3.7E-08 8E-13 90.5 12.0 45 116-160 2-57 (405)
53 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.8 9.6E-08 2.1E-12 82.9 12.7 182 120-319 1-231 (262)
54 cd07406 MPP_CG11883_N Drosophi 98.8 9.2E-08 2E-12 83.4 12.2 178 118-318 1-208 (257)
55 cd07410 MPP_CpdB_N Escherichia 98.7 3.2E-07 6.9E-12 81.0 13.9 183 118-318 1-231 (277)
56 cd07394 MPP_Vps29 Homo sapiens 98.7 5.1E-07 1.1E-11 74.1 13.3 62 119-195 1-65 (178)
57 COG0420 SbcD DNA repair exonuc 98.7 7.2E-08 1.6E-12 89.3 8.3 73 118-195 1-88 (390)
58 cd07398 MPP_YbbF-LpxH Escheric 98.7 4.3E-08 9.3E-13 83.2 6.2 75 121-195 1-82 (217)
59 cd07409 MPP_CD73_N CD73 ecto-5 98.6 4.2E-07 9.2E-12 80.3 9.7 148 145-317 48-218 (281)
60 cd07408 MPP_SA0022_N Staphyloc 98.6 6.9E-07 1.5E-11 78.0 10.9 182 118-318 1-214 (257)
61 cd07412 MPP_YhcR_N Bacillus su 98.5 2E-06 4.2E-11 76.3 13.2 90 226-317 138-241 (288)
62 cd07407 MPP_YHR202W_N Saccharo 98.5 8.9E-06 1.9E-10 71.7 16.8 189 115-317 3-231 (282)
63 cd07411 MPP_SoxB_N Thermus the 98.5 6.2E-07 1.4E-11 78.5 9.5 146 145-317 50-219 (264)
64 KOG3662 Cell division control 98.5 9.1E-07 2E-11 80.0 10.5 117 115-244 46-182 (410)
65 PRK09419 bifunctional 2',3'-cy 98.5 2.4E-06 5.3E-11 89.4 14.7 189 115-317 658-882 (1163)
66 cd07382 MPP_DR1281 Deinococcus 98.5 5.5E-06 1.2E-10 71.6 14.0 172 119-317 1-178 (255)
67 cd07425 MPP_Shelphs Shewanella 98.5 2.7E-07 5.8E-12 77.8 5.5 65 121-195 1-80 (208)
68 TIGR00619 sbcd exonuclease Sbc 98.4 4.9E-07 1.1E-11 78.6 7.2 74 118-195 1-88 (253)
69 cd07390 MPP_AQ1575 Aquifex aeo 98.4 7.1E-07 1.5E-11 72.7 7.1 65 121-195 2-82 (168)
70 COG0737 UshA 5'-nucleotidase/2 98.3 5.1E-06 1.1E-10 79.9 11.9 191 111-317 20-247 (517)
71 cd07405 MPP_UshA_N Escherichia 98.3 3.3E-06 7.1E-11 74.8 9.8 192 118-318 1-222 (285)
72 TIGR00282 metallophosphoestera 98.3 2.5E-05 5.4E-10 67.8 14.9 174 118-317 1-181 (266)
73 cd07380 MPP_CWF19_N Schizosacc 98.3 1.3E-06 2.9E-11 69.2 6.3 117 121-319 1-125 (150)
74 PRK10966 exonuclease subunit S 98.3 1.1E-06 2.5E-11 81.3 6.6 74 118-195 1-87 (407)
75 COG0622 Predicted phosphoester 98.3 6.5E-06 1.4E-10 66.8 10.0 64 118-195 2-65 (172)
76 PHA02546 47 endonuclease subun 98.3 3E-06 6.5E-11 76.9 8.0 75 118-195 1-89 (340)
77 PRK09558 ushA bifunctional UDP 98.2 2.4E-05 5.2E-10 75.8 13.3 192 115-317 32-257 (551)
78 PRK09453 phosphodiesterase; Pr 98.2 4.4E-06 9.6E-11 68.9 6.9 75 118-195 1-76 (182)
79 cd08162 MPP_PhoA_N Synechococc 98.2 1.6E-05 3.4E-10 71.3 10.5 38 266-317 206-244 (313)
80 COG2908 Uncharacterized protei 98.1 3.9E-06 8.5E-11 70.3 5.3 70 122-195 2-80 (237)
81 TIGR01530 nadN NAD pyrophospha 98.1 2.4E-05 5.1E-10 75.6 11.2 145 145-317 49-218 (550)
82 cd07391 MPP_PF1019 Pyrococcus 98.0 8.9E-06 1.9E-10 66.5 5.3 49 144-195 40-88 (172)
83 PHA02239 putative protein phos 98.0 1.7E-05 3.7E-10 67.9 6.4 72 118-195 1-73 (235)
84 PRK11907 bifunctional 2',3'-cy 97.9 0.00011 2.4E-09 73.3 11.0 195 108-317 106-354 (814)
85 PRK09419 bifunctional 2',3'-cy 97.9 6.3E-05 1.4E-09 79.0 9.5 47 266-317 233-280 (1163)
86 PRK00166 apaH diadenosine tetr 97.8 3.7E-05 8.1E-10 67.4 5.7 66 118-195 1-69 (275)
87 cd07424 MPP_PrpA_PrpB PrpA and 97.8 4E-05 8.7E-10 64.6 5.6 63 119-195 2-67 (207)
88 cd07386 MPP_DNA_pol_II_small_a 97.8 7.2E-05 1.6E-09 64.7 6.9 75 121-195 2-94 (243)
89 PRK04036 DNA polymerase II sma 97.8 9.9E-05 2.1E-09 70.4 8.3 81 115-195 241-343 (504)
90 cd07423 MPP_PrpE Bacillus subt 97.7 7E-05 1.5E-09 64.4 6.5 67 119-195 2-80 (234)
91 TIGR00024 SbcD_rel_arch putati 97.7 9.8E-05 2.1E-09 62.9 6.2 72 118-195 15-102 (225)
92 KOG2863 RNA lariat debranching 97.7 0.00021 4.6E-09 63.0 8.0 179 118-316 1-229 (456)
93 PRK13625 bis(5'-nucleosyl)-tet 97.6 9.7E-05 2.1E-09 63.9 5.7 68 118-195 1-79 (245)
94 TIGR01390 CycNucDiestase 2',3' 97.5 0.00026 5.7E-09 69.4 7.9 46 266-317 194-240 (626)
95 PRK09968 serine/threonine-spec 97.5 0.00014 3E-09 61.8 5.1 63 119-195 16-81 (218)
96 PRK09418 bifunctional 2',3'-cy 97.5 0.0017 3.8E-08 64.8 13.3 46 266-317 243-289 (780)
97 PRK11439 pphA serine/threonine 97.5 0.00018 4E-09 61.1 5.1 63 119-195 18-83 (218)
98 cd07413 MPP_PA3087 Pseudomonas 97.4 0.00026 5.6E-09 60.3 5.2 69 120-195 1-76 (222)
99 cd07422 MPP_ApaH Escherichia c 97.4 0.00029 6.4E-09 61.1 5.5 63 121-195 2-67 (257)
100 COG4186 Predicted phosphoester 97.3 0.0051 1.1E-07 48.1 10.9 68 119-195 5-86 (186)
101 PRK09420 cpdB bifunctional 2', 97.3 0.0052 1.1E-07 60.6 13.6 46 266-317 217-263 (649)
102 cd07381 MPP_CapA CapA and rela 97.3 0.0041 8.9E-08 53.6 11.4 59 254-318 162-220 (239)
103 cd07387 MPP_PolD2_C PolD2 (DNA 97.3 0.0072 1.6E-07 52.3 12.6 137 120-262 2-176 (257)
104 cd00144 MPP_PPP_family phospho 97.2 0.00054 1.2E-08 58.3 5.5 64 122-195 2-68 (225)
105 cd07421 MPP_Rhilphs Rhilph pho 97.2 0.0008 1.7E-08 58.9 5.7 70 119-195 3-80 (304)
106 TIGR00668 apaH bis(5'-nucleosy 97.1 0.00091 2E-08 58.4 5.1 67 119-195 2-69 (279)
107 COG5555 Cytolysin, a secreted 97.1 0.00092 2E-08 57.3 4.9 171 146-317 127-334 (392)
108 smart00854 PGA_cap Bacterial c 97.0 0.012 2.5E-07 50.8 11.7 57 256-318 162-218 (239)
109 PF00041 fn3: Fibronectin type 97.0 0.0033 7.2E-08 44.1 7.0 70 16-97 2-75 (85)
110 COG1407 Predicted ICC-like pho 96.9 0.0027 5.9E-08 53.6 6.5 74 119-196 21-111 (235)
111 COG1692 Calcineurin-like phosp 96.8 0.026 5.6E-07 47.7 11.3 173 118-317 1-180 (266)
112 KOG2310 DNA repair exonuclease 96.7 0.0044 9.5E-08 57.8 6.9 45 115-160 11-67 (646)
113 cd07420 MPP_RdgC Drosophila me 96.7 0.004 8.6E-08 55.8 5.9 67 119-195 52-123 (321)
114 PF09587 PGA_cap: Bacterial ca 96.6 0.054 1.2E-06 47.0 12.8 61 252-318 169-229 (250)
115 KOG0196 Tyrosine kinase, EPH ( 96.3 0.015 3.3E-07 56.9 8.1 93 8-111 434-537 (996)
116 cd07416 MPP_PP2B PP2B, metallo 96.3 0.0075 1.6E-07 53.8 5.7 67 119-195 44-114 (305)
117 COG1311 HYS2 Archaeal DNA poly 96.3 0.014 3.1E-07 54.0 7.2 81 115-195 223-321 (481)
118 PF13277 YmdB: YmdB-like prote 96.3 0.12 2.5E-06 44.3 12.1 169 121-316 1-175 (253)
119 cd07418 MPP_PP7 PP7, metalloph 96.2 0.0094 2E-07 54.4 5.8 67 119-195 67-138 (377)
120 smart00156 PP2Ac Protein phosp 96.2 0.01 2.2E-07 52.1 5.8 68 119-195 29-99 (271)
121 cd07415 MPP_PP2A_PP4_PP6 PP2A, 96.0 0.012 2.5E-07 52.1 5.1 69 119-195 43-113 (285)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 95.9 0.014 3E-07 51.8 5.4 69 119-195 51-121 (293)
123 KOG4419 5' nucleotidase [Nucle 95.9 0.095 2.1E-06 49.9 10.8 55 251-317 212-269 (602)
124 PTZ00239 serine/threonine prot 95.6 0.022 4.8E-07 50.7 5.4 67 119-195 44-114 (303)
125 cd07417 MPP_PP5_C PP5, C-termi 95.6 0.023 4.9E-07 50.9 5.5 67 119-195 61-132 (316)
126 PTZ00480 serine/threonine-prot 95.6 0.023 5.1E-07 50.8 5.4 69 119-195 60-130 (320)
127 KOG3947 Phosphoesterases [Gene 95.3 0.77 1.7E-05 39.7 13.1 70 115-197 59-128 (305)
128 cd00063 FN3 Fibronectin type 3 94.9 0.27 5.8E-06 34.0 8.3 70 16-97 3-76 (93)
129 cd07419 MPP_Bsu1_C Arabidopsis 94.8 0.065 1.4E-06 48.0 5.9 21 294-314 242-262 (311)
130 PTZ00244 serine/threonine-prot 94.7 0.035 7.6E-07 49.2 3.7 68 120-195 54-123 (294)
131 KOG4221 Receptor mediating net 94.6 0.09 1.9E-06 53.9 6.8 79 16-109 618-711 (1381)
132 smart00060 FN3 Fibronectin typ 93.6 0.74 1.6E-05 30.6 8.2 71 17-97 4-76 (83)
133 PF04042 DNA_pol_E_B: DNA poly 91.8 0.12 2.6E-06 43.3 2.5 77 120-196 1-92 (209)
134 KOG3513 Neural cell adhesion m 88.5 3.3 7.2E-05 42.7 9.6 72 15-97 821-896 (1051)
135 KOG0372 Serine/threonine speci 85.4 1.6 3.4E-05 37.2 4.6 69 120-195 45-114 (303)
136 KOG0374 Serine/threonine speci 83.0 1.6 3.4E-05 39.5 3.9 68 120-195 61-131 (331)
137 KOG4221 Receptor mediating net 82.5 11 0.00024 39.5 9.9 96 22-126 527-630 (1381)
138 KOG0371 Serine/threonine prote 74.7 4.7 0.0001 34.7 4.0 67 120-195 62-131 (319)
139 PTZ00235 DNA polymerase epsilo 71.8 22 0.00048 31.4 7.6 80 116-195 26-122 (291)
140 KOG0373 Serine/threonine speci 71.3 7.9 0.00017 32.5 4.5 66 120-195 48-117 (306)
141 PF10179 DUF2369: Uncharacteri 70.7 19 0.00041 32.0 7.0 18 79-96 16-33 (300)
142 KOG3325 Membrane coat complex 70.0 4.7 0.0001 31.6 2.8 23 296-318 98-120 (183)
143 PRK09453 phosphodiesterase; Pr 68.2 5 0.00011 32.7 2.9 14 303-316 116-129 (182)
144 KOG3513 Neural cell adhesion m 67.3 34 0.00074 35.7 8.9 80 7-97 610-693 (1051)
145 PF06874 FBPase_2: Firmicute f 59.9 5.1 0.00011 38.9 1.6 50 136-196 176-225 (640)
146 KOG4258 Insulin/growth factor 59.0 38 0.00082 34.4 7.2 110 17-127 489-624 (1025)
147 KOG2476 Uncharacterized conser 58.8 16 0.00034 34.3 4.4 70 117-192 5-75 (528)
148 KOG0375 Serine-threonine phosp 56.9 10 0.00022 34.3 2.7 68 120-195 90-159 (517)
149 PF10179 DUF2369: Uncharacteri 56.6 64 0.0014 28.8 7.7 20 79-98 261-280 (300)
150 cd02856 Glycogen_debranching_e 55.6 17 0.00037 26.5 3.5 23 75-97 44-66 (103)
151 COG2248 Predicted hydrolase (m 55.4 33 0.00071 29.7 5.4 77 115-195 174-250 (304)
152 TIGR02855 spore_yabG sporulati 54.9 11 0.00023 32.8 2.5 24 292-315 140-164 (283)
153 PF05582 Peptidase_U57: YabG p 54.8 13 0.00029 32.5 3.1 24 292-315 141-165 (287)
154 cd02852 Isoamylase_N_term Isoa 54.5 18 0.00039 27.2 3.5 23 75-97 48-70 (119)
155 cd02853 MTHase_N_term Maltooli 52.2 20 0.00043 25.1 3.3 22 76-98 40-61 (85)
156 cd02860 Pullulanase_N_term Pul 48.1 25 0.00053 25.4 3.3 25 74-98 45-69 (100)
157 PF09294 Interfer-bind: Interf 46.5 18 0.0004 26.2 2.4 66 16-97 5-86 (106)
158 PF01784 NIF3: NIF3 (NGG1p int 40.5 31 0.00067 29.6 3.2 42 272-315 56-97 (241)
159 COG3855 Fbp Uncharacterized pr 37.9 28 0.0006 32.8 2.6 42 145-196 190-231 (648)
160 COG2843 PgsA Putative enzyme o 36.9 82 0.0018 29.0 5.4 56 256-318 213-269 (372)
161 PHA03008 hypothetical protein; 35.9 82 0.0018 26.1 4.7 41 272-317 164-204 (234)
162 PF07353 Uroplakin_II: Uroplak 35.2 31 0.00068 27.3 2.2 33 79-111 103-140 (184)
163 TIGR03413 GSH_gloB hydroxyacyl 35.2 73 0.0016 27.4 4.8 47 148-195 120-167 (248)
164 PF02922 CBM_48: Carbohydrate- 34.5 51 0.0011 22.7 3.1 25 75-99 48-74 (85)
165 PF03808 Glyco_tran_WecB: Glyc 33.1 1.3E+02 0.0028 24.2 5.7 51 250-312 58-108 (172)
166 PRK10799 metal-binding protein 32.5 69 0.0015 27.6 4.1 42 272-316 59-100 (247)
167 PF01108 Tissue_fac: Tissue fa 32.3 2E+02 0.0043 20.9 7.2 74 12-97 20-98 (107)
168 cd02850 Cellulase_N_term Cellu 30.8 1.9E+02 0.0041 20.2 8.6 25 74-98 54-79 (86)
169 COG0296 GlgB 1,4-alpha-glucan 30.3 65 0.0014 31.9 3.9 38 75-112 72-114 (628)
170 PRK00207 sulfur transfer compl 30.1 2E+02 0.0044 21.9 5.9 61 250-313 18-80 (128)
171 KOG0196 Tyrosine kinase, EPH ( 30.0 2E+02 0.0042 29.6 7.0 86 8-97 326-417 (996)
172 PF01764 Lipase_3: Lipase (cla 27.6 74 0.0016 24.1 3.2 24 291-314 48-72 (140)
173 KOG0376 Serine-threonine phosp 26.6 73 0.0016 30.2 3.4 75 116-195 212-286 (476)
174 PF00753 Lactamase_B: Metallo- 26.4 1E+02 0.0022 24.1 4.0 12 149-160 140-151 (194)
175 PF07355 GRDB: Glycine/sarcosi 26.3 92 0.002 28.3 3.9 30 290-319 65-94 (349)
176 KOG0377 Protein serine/threoni 26.3 36 0.00077 31.8 1.3 71 119-195 166-237 (631)
177 PF01012 ETF: Electron transfe 25.5 1.1E+02 0.0024 24.1 4.0 54 253-315 47-100 (164)
178 TIGR00486 YbgI_SA1388 dinuclea 24.4 1.3E+02 0.0027 26.0 4.4 41 272-315 60-100 (249)
179 PF13205 Big_5: Bacterial Ig-l 23.8 1.3E+02 0.0027 21.6 3.7 17 82-98 69-85 (107)
180 COG3426 Butyrate kinase [Energ 22.9 90 0.002 27.6 3.0 41 144-195 295-336 (358)
181 KOG4222 Axon guidance receptor 22.5 1.4E+02 0.0029 31.8 4.6 80 4-101 522-607 (1281)
182 TIGR03000 plancto_dom_1 Planct 22.3 2.2E+02 0.0047 19.6 4.2 23 75-97 26-48 (75)
183 PF10342 GPI-anchored: Ser-Thr 22.2 2.7E+02 0.0059 19.2 8.6 65 30-98 13-79 (93)
184 PRK10425 DNase TatD; Provision 21.6 67 0.0014 27.9 2.1 40 236-278 90-129 (258)
185 cd06533 Glyco_transf_WecG_TagA 21.1 2.8E+02 0.0061 22.2 5.6 33 271-312 74-106 (171)
186 cd01984 AANH_like Adenine nucl 20.9 1.3E+02 0.0029 20.5 3.3 23 292-314 35-57 (86)
187 TIGR03012 sulf_tusD_dsrE sulfu 20.8 3.8E+02 0.0083 20.3 6.1 59 250-312 17-78 (127)
188 PF10686 DUF2493: Protein of u 20.7 2.3E+02 0.005 19.1 4.2 37 117-155 3-41 (71)
189 PF05986 ADAM_spacer1: ADAM-TS 20.2 3.6E+02 0.0079 19.9 5.6 20 76-95 93-113 (114)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-64 Score=448.63 Aligned_cols=308 Identities=43% Similarity=0.689 Sum_probs=263.9
Q ss_pred CCCCCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCC-----ceEEEEEEEEEEeccccce
Q 045849 1 MPLDADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQ-----KEQAEGKVYTYKYYNYTSG 75 (320)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 75 (320)
|++++.++.+|.+.+.|+||||++++... +|+|+|.|.+.. ...|+|+...... ...+++.+..+...++..+
T Consensus 29 ~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~~-~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~~~~~sg 106 (452)
T KOG1378|consen 29 LLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDGE-ENVVRYGEVKDKLDNSAARGMTEAWTDGYANGWRDSG 106 (452)
T ss_pred cccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCCC-CceEEEeecCCCccccccccceEEEecccccccceee
Confidence 56788899999999999999999998764 999999998643 4999999765542 1223333333333346789
Q ss_pred EEEEEEecCCCCCCEEEEEeCcC-CceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEccc
Q 045849 76 YIHHCTIRHLEFNTKYYYVVGIG-HTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGD 154 (320)
Q Consensus 76 ~~~~~~l~~L~p~t~Y~Y~v~~~-~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD 154 (320)
++|+|++++|+|+|+|+|+||++ .||+.++|+|+| ++..+.+|+++||++.......++....+.. ++|+|||.||
T Consensus 107 ~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~-k~d~vlhiGD 183 (452)
T KOG1378|consen 107 YIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTSTLRNQEENL-KPDAVLHIGD 183 (452)
T ss_pred eEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEccccccccccchHhHHhccc-CCcEEEEecc
Confidence 99999999999999999999997 589999999988 3457999999999999887777777777763 7999999999
Q ss_pred ccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCc
Q 045849 155 LSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRAS 234 (320)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~ 234 (320)
++|+++..+ .+||.|.++++++++.+|+|++.||||.++.+.. .|..|..+|.+|.++..+..+.||||++|+
T Consensus 184 lsYa~~~~n---~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~ 256 (452)
T KOG1378|consen 184 LSYAMGYSN---WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARFNMPGNSSESDSNLYYSFDVGG 256 (452)
T ss_pred hhhcCCCCc---cchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceeeccCCCcCCCCCceeEEEeecc
Confidence 999988643 6999999999999999999999999999865433 588999999999988777778999999999
Q ss_pred EEEEEEcccCCC--CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCC-CCCccH--HHHHHHHHHHHhCCCcEE
Q 045849 235 VYIIVLSSYSAY--GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNY-HYMEGE--TMRVMYEPWLVKYKVDVV 309 (320)
Q Consensus 235 v~fi~lds~~~~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-~~~~~~--~~~~~l~~l~~~~~v~lv 309 (320)
+|||+|+|+..+ ..+.+|++||+++|++++|++.||+||+.|.|+|++... +..+++ .+|+.|++||-+++||+|
T Consensus 257 vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvv 336 (452)
T KOG1378|consen 257 VHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVV 336 (452)
T ss_pred EEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEE
Confidence 999999998875 346899999999999998776899999999999998774 455555 789999999999999999
Q ss_pred EecCccccccC
Q 045849 310 FAGHVHAYERS 320 (320)
Q Consensus 310 l~GH~H~y~Rt 320 (320)
|.||.|.|||+
T Consensus 337 f~GHvH~YER~ 347 (452)
T KOG1378|consen 337 FWGHVHRYERF 347 (452)
T ss_pred Eeccceehhcc
Confidence 99999999996
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=2.8e-61 Score=444.67 Aligned_cols=295 Identities=40% Similarity=0.690 Sum_probs=250.0
Q ss_pred CCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEe-ccccceEEEEEEecCCCCCCEE
Q 045849 13 GYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKY-YNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 13 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
....|+||||++++ .++|+|+|.|.+. ..+.|+||++++.+..++.|+..+|.. ..+.++++|+|+|+||+|+|+|
T Consensus 40 ~~~~P~qvhls~~~--~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y 116 (427)
T PLN02533 40 DPTHPDQVHISLVG--PDKMRISWITQDS-IPPSVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVY 116 (427)
T ss_pred CCCCCceEEEEEcC--CCeEEEEEECCCC-CCCEEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCCCCEE
Confidence 56689999999997 4799999999864 578999999988888899998887764 2345789999999999999999
Q ss_pred EEEeCcCCceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhh
Q 045849 92 YYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT 171 (320)
Q Consensus 92 ~Y~v~~~~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~ 171 (320)
+|||+...+++.++|+|+|.. .++||+++||+|.......+++++.+. +|||||++||++|+++ .+.+|+.
T Consensus 117 ~Yrvg~~~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~~~~tl~~i~~~--~pD~vl~~GDl~y~~~----~~~~wd~ 187 (427)
T PLN02533 117 YYKCGGPSSTQEFSFRTPPSK---FPIKFAVSGDLGTSEWTKSTLEHVSKW--DYDVFILPGDLSYANF----YQPLWDT 187 (427)
T ss_pred EEEECCCCCccceEEECCCCC---CCeEEEEEEeCCCCcccHHHHHHHHhc--CCCEEEEcCccccccc----hHHHHHH
Confidence 999998777899999998753 689999999998765556677777665 9999999999999764 3468999
Q ss_pred HHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChH
Q 045849 172 WGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTP 251 (320)
Q Consensus 172 ~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~ 251 (320)
|.+.++++.+.+|+|+++||||....+.. ....+..|..+|.+|.+..+...+.||+|++|++|||+||++.++....+
T Consensus 188 f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~ 266 (427)
T PLN02533 188 FGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSE 266 (427)
T ss_pred HHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCccccCchH
Confidence 99999999999999999999999643211 12346778899999976555567899999999999999999988777899
Q ss_pred HHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCc--cHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 252 QYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYME--GETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 252 q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
|++||+++|++++++..+|+||++|+|+|++...+... ...+|+.|++||++++||++|+||+|.|||+
T Consensus 267 Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~ 337 (427)
T PLN02533 267 QYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERF 337 (427)
T ss_pred HHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceeccccc
Confidence 99999999999877788999999999999876543222 2457899999999999999999999999996
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=1.9e-36 Score=269.78 Aligned_cols=201 Identities=45% Similarity=0.805 Sum_probs=155.5
Q ss_pred CCCeEEEEEEcCCCC-CCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCc
Q 045849 115 DVPYSFGLIGDLGQS-YDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~-~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 193 (320)
..++||+++||+|.. .....+++++.+...+|||||++||++|+++.. ...+|+.|++.++++...+|+++++||||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~--~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 79 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--NGSRWDTFMRQIEPLASYVPYMVTPGNHE 79 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc--cchhHHHHHHHHHHHHhcCCcEEcCcccc
Confidence 368999999999973 455677888877434899999999999886632 23689999999999988999999999999
Q ss_pred cccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC---CCChHHHHHHHHhcccCCCCCCCE
Q 045849 194 IDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY---GKYTPQYKWLEEELPKVNRSETPW 270 (320)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~---~~~~~q~~WL~~~L~~~~~~~~~~ 270 (320)
......... ...+..++.++........+.||+|++|+++||+|||+... ....+|++||+++|+++++.+.+|
T Consensus 80 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~ 156 (294)
T cd00839 80 ADYNFSFYK---IKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPW 156 (294)
T ss_pred cccCCCCcc---cccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCe
Confidence 964321110 01111122233333344567899999999999999997654 457899999999999875556789
Q ss_pred EEEEecccceecCCCCCC--ccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 271 LIVLMHAPWYNSYNYHYM--EGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
+||++|+|+|+....... .....++.|.+||++++|+++|+||+|.|+|+
T Consensus 157 ~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~ 208 (294)
T cd00839 157 IIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERT 208 (294)
T ss_pred EEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEee
Confidence 999999999987654322 24577899999999999999999999999996
No 4
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.97 E-value=2.2e-29 Score=222.33 Aligned_cols=187 Identities=24% Similarity=0.396 Sum_probs=132.1
Q ss_pred eEEEEEEcCCCC-CCcHH----HHHHHHhCCCCCceEEEcccccccCCCCCCCChhh-hhHHHHHhhhhccCCeEeCCCC
Q 045849 118 YSFGLIGDLGQS-YDSNV----TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRW-DTWGRFVERSAAYQPWIWTAGN 191 (320)
Q Consensus 118 ~~f~~~gD~~~~-~~~~~----~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~~~~~GN 191 (320)
++|+++||++.. ..... .+.++.+. .+|||||++||++|+++........| +.|.+.++.+..++|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCC
Confidence 489999999986 22222 33444444 38999999999999887543333344 3455555555567999999999
Q ss_pred CccccCCCCCCcccCcc--cceeeeCCCCCCCCCCCcEEEEEeC------cEEEEEEcccCCC---------------CC
Q 045849 192 HEIDFYPEIGETVPFKP--YSHRYHVPYRASGSTAPFWYSIKRA------SVYIIVLSSYSAY---------------GK 248 (320)
Q Consensus 192 HD~~~~~~~~~~~~~~~--~~~~f~~p~~~~~~~~~~~ys~~~g------~v~fi~lds~~~~---------------~~ 248 (320)
||..... .....+.. +..++.+ +..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~--~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNV--SAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCc--hheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 9986321 11101111 1222222 3569999988 7999999996421 13
Q ss_pred ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 249 YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 249 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
..+|++||++.|+++ ..+|+||++|+|+++..... .....++.|.+++++++|+++|+||+|.++|.
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~ 216 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHI 216 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceee
Confidence 589999999999985 34899999999999865432 22567899999999999999999999999873
No 5
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.96 E-value=5.1e-29 Score=223.25 Aligned_cols=192 Identities=17% Similarity=0.278 Sum_probs=136.7
Q ss_pred CCCeEEEEEEcCCCCCCcHHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhh-HHHHHhhhh--ccCCeEe
Q 045849 115 DVPYSFGLIGDLGQSYDSNVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT-WGRFVERSA--AYQPWIW 187 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~P~~~ 187 (320)
...++|+++||+|.+...+..++ ++.++ .++||||.+||+. .+|..+.++.+|+. |.+...... ..+||++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~ 101 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFT 101 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCeEE
Confidence 46899999999997665555444 34444 4899999999998 56665555667766 545554433 5789999
Q ss_pred CCCCCccccCCCCCCcccCc------------------ccceeeeCCCCCCCCCCCcEEEE----Ee-------------
Q 045849 188 TAGNHEIDFYPEIGETVPFK------------------PYSHRYHVPYRASGSTAPFWYSI----KR------------- 232 (320)
Q Consensus 188 ~~GNHD~~~~~~~~~~~~~~------------------~~~~~f~~p~~~~~~~~~~~ys~----~~------------- 232 (320)
++||||+..+.... ...+. ....+|.|| +.||.+ ..
T Consensus 102 vLGNHDy~Gn~~AQ-i~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP--------~~yY~~~~~f~~~~~~~~~~~~~~~ 172 (394)
T PTZ00422 102 VLGQADWDGNYNAE-LLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMP--------NYWYHYFTHFTDTSGPSLLKSGHKD 172 (394)
T ss_pred eCCcccccCCchhh-hccccccccccccccccccccccccCCCccCC--------chhheeeeeeecccccccccccCCC
Confidence 99999985332110 00000 112466666 457754 21
Q ss_pred CcEEEEEEcccCC-----CCC-ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCC
Q 045849 233 ASVYIIVLSSYSA-----YGK-YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKV 306 (320)
Q Consensus 233 g~v~fi~lds~~~-----~~~-~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v 306 (320)
..+.||+|||..- +.. ...|++||+++|+.+ ++.++|+||+.|||+|+++..+ ....+++.|+|||++|+|
T Consensus 173 ~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~V 249 (394)
T PTZ00422 173 MSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQV 249 (394)
T ss_pred CEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCc
Confidence 1289999999531 122 367899999999654 3567899999999999987643 345689999999999999
Q ss_pred cEEEecCccccccC
Q 045849 307 DVVFAGHVHAYERS 320 (320)
Q Consensus 307 ~lvl~GH~H~y~Rt 320 (320)
|++|+||+|+|||.
T Consensus 250 dlYisGHDH~lq~i 263 (394)
T PTZ00422 250 DLYISGYDRNMEVL 263 (394)
T ss_pred CEEEEccccceEEe
Confidence 99999999999983
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.96 E-value=5.1e-28 Score=211.87 Aligned_cols=191 Identities=21% Similarity=0.260 Sum_probs=132.5
Q ss_pred CCeEEEEEEcCCCCCC--c---------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh
Q 045849 116 VPYSFGLIGDLGQSYD--S---------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER 178 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~--~---------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
++++|+++||+|.+.. . ...++.+.+...+||+||++||+++..........+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 5899999999998731 1 1122333333248999999999997654211111345666666766
Q ss_pred hhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC------CCChHH
Q 045849 179 SAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY------GKYTPQ 252 (320)
Q Consensus 179 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~------~~~~~q 252 (320)
+...+|+++++||||....+.. ..+..|...| ...||++++|+++||+|||.... ....+|
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~~---~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~q 149 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPTE---ESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQ 149 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCCh---hHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHH
Confidence 6667999999999998532111 1112222222 23588999999999999995422 134789
Q ss_pred HHHHHHhcccCCCCCCCEEEEEecccceecCCCCC----CccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 253 YKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHY----MEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 253 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+.+
T Consensus 150 l~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~ 220 (262)
T cd07395 150 DVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAG 220 (262)
T ss_pred HHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCc
Confidence 99999999986434567899999999986433211 12345688999999999999999999998765
No 7
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.95 E-value=3.1e-26 Score=215.31 Aligned_cols=284 Identities=20% Similarity=0.268 Sum_probs=144.3
Q ss_pred EEeeCCCCCcEEEEEEeCCC--------CCCCeEE--EeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 22 ITQGDLVGKAVIVSWVTVDE--------PGTNTVV--YWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 22 l~~~~~~~~~~~v~W~t~~~--------~~~~~v~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
++.|+ |..+-+|.|..-.. .....|+ +.+.+........+...+ .....++.++.|+||+|+|+|
T Consensus 3 vasGd-p~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y 77 (453)
T PF09423_consen 3 VASGD-PTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRY 77 (453)
T ss_dssp EEEE----SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EE
T ss_pred ccccC-CCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceE
Confidence 34554 44555666776543 1133444 444444333344444332 124678999999999999999
Q ss_pred EEEeCcC---CceeeEEEECCCCCCCCCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCC---CC--
Q 045849 92 YYVVGIG---HTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNY---PC-- 163 (320)
Q Consensus 92 ~Y~v~~~---~~s~~~~F~t~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~---~~-- 163 (320)
+||+... ..+..++|+|+|... ...+||+++||.+........+.++.+. .+|||+|++||++|.+.. ..
T Consensus 78 ~Y~~~~~~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~~~~~~~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~ 155 (453)
T PF09423_consen 78 YYRFVVDGGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYEDGYFPAYRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLS 155 (453)
T ss_dssp EEEEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT--S--SEEEE-S-SS----TTSS--TT
T ss_pred EEEEEEecCCCCCCceEEEcCCCCC-CCceEEEEECCCCcccChHHHHHhhhcc-CCCcEEEEeCCeeeccCCccccccc
Confidence 9999983 467899999996543 3569999999998765567778888774 389999999999999862 00
Q ss_pred -----------CCChhhhh----H-----HHHHhhhhccCCeEeCCCCCccccCCCCCCcc---------------cCcc
Q 045849 164 -----------HDNNRWDT----W-----GRFVERSAAYQPWIWTAGNHEIDFYPEIGETV---------------PFKP 208 (320)
Q Consensus 164 -----------~~~~~~~~----~-----~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~---------------~~~~ 208 (320)
......+. + ...++.+.+.+|+++++.+||+..+....... .+..
T Consensus 156 ~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~a 235 (453)
T PF09423_consen 156 RRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQA 235 (453)
T ss_dssp ---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHH
T ss_pred ccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHH
Confidence 00011111 1 23455667899999999999996432211110 0112
Q ss_pred cceeeeCCCCC---CCCCCCcEEEEEeCc-EEEEEEcccCC-----C----------------CCChHHHHHHHHhcccC
Q 045849 209 YSHRYHVPYRA---SGSTAPFWYSIKRAS-VYIIVLSSYSA-----Y----------------GKYTPQYKWLEEELPKV 263 (320)
Q Consensus 209 ~~~~f~~p~~~---~~~~~~~~ys~~~g~-v~fi~lds~~~-----~----------------~~~~~q~~WL~~~L~~~ 263 (320)
|.+. +|... .......|++|.+|+ +.|++||+... . -.+.+|++||++.|++
T Consensus 236 y~e~--~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~- 312 (453)
T PF09423_consen 236 YFEY--QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS- 312 (453)
T ss_dssp HHHH--S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-
T ss_pred HHhh--cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc-
Confidence 2222 22211 122356799999999 99999998421 0 1368999999999998
Q ss_pred CCCCCCEEEEEecccceecCC-----------CCCCccHHHHHHHHHHHHhCCCc--EEEecCcccc
Q 045849 264 NRSETPWLIVLMHAPWYNSYN-----------YHYMEGETMRVMYEPWLVKYKVD--VVFAGHVHAY 317 (320)
Q Consensus 264 ~~~~~~~~iv~~H~P~~~~~~-----------~~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~y 317 (320)
+.++|+||..-.|+..... ..+......|++|..+|.+.++. ++|+|..|..
T Consensus 313 --s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~ 377 (453)
T PF09423_consen 313 --SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHAS 377 (453)
T ss_dssp ----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSE
T ss_pred --CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchh
Confidence 5689999998888754321 12233456799999999998875 7899999974
No 8
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=3.4e-25 Score=183.90 Aligned_cols=192 Identities=20% Similarity=0.332 Sum_probs=125.1
Q ss_pred CCCCeEEEEEEcCCCCCCcHH-H----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhh-HHHHHhhhhccCCeEe
Q 045849 114 PDVPYSFGLIGDLGQSYDSNV-T----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT-WGRFVERSAAYQPWIW 187 (320)
Q Consensus 114 ~~~~~~f~~~gD~~~~~~~~~-~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~~~ 187 (320)
++++++|+++||++....... . +..+.+. .+.||||.+||++|.+|.....+.+.+. |.+....-.-+.|||.
T Consensus 40 ~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~ 118 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKPWYS 118 (336)
T ss_pred CCCceEEEEEcccccCCchhHHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccchhh
Confidence 468999999999996533221 1 2233344 3899999999999999876544433322 2222222123469999
Q ss_pred CCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEE----EEe--CcEEEEEEcccCC-----CC---------
Q 045849 188 TAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYS----IKR--ASVYIIVLSSYSA-----YG--------- 247 (320)
Q Consensus 188 ~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys----~~~--g~v~fi~lds~~~-----~~--------- 247 (320)
+.||||+..+-...-..-+.....+|..|.. ||. .+. -++.++++|+... ++
T Consensus 119 vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR~~ 190 (336)
T KOG2679|consen 119 VLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPRVK 190 (336)
T ss_pred hccCccccCchhhhhhHHHHhhccceecccH--------HhhcceeeeeeccccccchhhheecccccccccccCChHHH
Confidence 9999999743211100113344456655521 111 111 1234444444211 11
Q ss_pred CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 248 KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 248 ~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
....++.||+..|++ +.++|+||+.|||+.+.+... ....++++|.|||++++||++++||+|+.|.
T Consensus 191 ~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~HG--~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQh 257 (336)
T KOG2679|consen 191 YLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHHG--PTKELEKQLLPILEANGVDLYINGHDHCLQH 257 (336)
T ss_pred HHHHHHHHHHHHHHH---hhcceEEEecccceehhhccC--ChHHHHHHHHHHHHhcCCcEEEecchhhhhh
Confidence 125788999999999 789999999999999877642 4578899999999999999999999999763
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.92 E-value=1.3e-24 Score=190.47 Aligned_cols=181 Identities=21% Similarity=0.274 Sum_probs=119.9
Q ss_pred eEEEEEEcCCCCCC----------cHHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccC
Q 045849 118 YSFGLIGDLGQSYD----------SNVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~----------~~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
|||+++||+|.... .... ++.+.+. +||+||++||+++.... .....|+.+.+.++.+ .+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~--~~d~vv~~GDlv~~~~~--~~~~~~~~~~~~l~~l--~~ 74 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE--SLDFVVQLGDIIDGDNA--RAEEALDAVLAILDRL--KG 74 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC--CCCEEEECCCeecCCCc--hHHHHHHHHHHHHHhc--CC
Confidence 69999999995432 1122 3334333 79999999999965321 1113455555555543 48
Q ss_pred CeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC------------------
Q 045849 184 PWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA------------------ 245 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------------------ 245 (320)
|+++++||||..... ..+.. .... ......||+|+.++++||+||+...
T Consensus 75 p~~~v~GNHD~~~~~--------~~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~ 141 (267)
T cd07396 75 PVHHVLGNHDLYNPS--------REYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDN 141 (267)
T ss_pred CEEEecCcccccccc--------Hhhhh-cccc----cCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHh
Confidence 999999999985321 00110 0001 1234569999999999999999531
Q ss_pred --------------C--CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcE
Q 045849 246 --------------Y--GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDV 308 (320)
Q Consensus 246 --------------~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~l 308 (320)
+ ....+|++||++.|+++.. +..++||++|+|++...... ......++.+.++++++ +|++
T Consensus 142 ~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~ 219 (267)
T cd07396 142 SNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKA 219 (267)
T ss_pred chhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEE
Confidence 0 1247999999999997532 23468999999997654311 11122357889999996 8999
Q ss_pred EEecCcccccc
Q 045849 309 VFAGHVHAYER 319 (320)
Q Consensus 309 vl~GH~H~y~R 319 (320)
+|+||+|.+..
T Consensus 220 v~~GH~H~~~~ 230 (267)
T cd07396 220 CISGHDHEGGY 230 (267)
T ss_pred EEcCCcCCCCc
Confidence 99999999863
No 10
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.92 E-value=3.8e-24 Score=190.82 Aligned_cols=285 Identities=18% Similarity=0.196 Sum_probs=188.9
Q ss_pred EEEEeeCCCCCcEEEEEEeCC-------CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEE
Q 045849 20 VHITQGDLVGKAVIVSWVTVD-------EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYY 92 (320)
Q Consensus 20 v~l~~~~~~~~~~~v~W~t~~-------~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~ 92 (320)
.-++.| ||...-.|.|..-. .+....+|++++++....+..|+..+. ....+.+++.++||+|++.|+
T Consensus 41 ~GVaSG-Dp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----p~~dhtv~v~~~gL~P~~~yf 115 (522)
T COG3540 41 HGVASG-DPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----PELDHTVHVDLRGLSPDQDYF 115 (522)
T ss_pred cccccC-CCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----cccCceEEEeccCCCCCceEE
Confidence 333444 55666677787643 134567788887765444433433322 145688899999999999999
Q ss_pred EEeCcC-CceeeEEEECCCCCCCC-CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCC-----
Q 045849 93 YVVGIG-HTERQFWFVTPPEVGPD-VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHD----- 165 (320)
Q Consensus 93 Y~v~~~-~~s~~~~F~t~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~----- 165 (320)
||+..+ ..+..++|+|+|+.+.. .-++|++.++.+.+.+...+.+.|.+. +|||+||.||.+|+++.....
T Consensus 116 YRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~--~~D~viH~GDyIYeyg~~~~~~~~~~ 193 (522)
T COG3540 116 YRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKE--EPDFVIHLGDYIYEYGPIPDEVSLNS 193 (522)
T ss_pred EEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhc--CCCEEEEcCCeeeccCCccccccccc
Confidence 999987 56789999999987632 223444444455555666777788776 899999999999998753111
Q ss_pred -------------ChhhhhHH---------HHHhhhhccCCeEeCCCCCccccCCCCCCcc----------------cCc
Q 045849 166 -------------NNRWDTWG---------RFVERSAAYQPWIWTAGNHEIDFYPEIGETV----------------PFK 207 (320)
Q Consensus 166 -------------~~~~~~~~---------~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~----------------~~~ 207 (320)
....+.|. ..++...+..|+++.+.+||..++...+... .+.
T Consensus 194 ~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~q 273 (522)
T COG3540 194 WKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQ 273 (522)
T ss_pred ccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHH
Confidence 00112221 2334456789999999999997542211111 122
Q ss_pred ccceeeeCCCCCC--CCCCCcEEEEEeCc-EEEEEEcccCC----------------------CCCChHHHHHHHHhccc
Q 045849 208 PYSHRYHVPYRAS--GSTAPFWYSIKRAS-VYIIVLSSYSA----------------------YGKYTPQYKWLEEELPK 262 (320)
Q Consensus 208 ~~~~~f~~p~~~~--~~~~~~~ys~~~g~-v~fi~lds~~~----------------------~~~~~~q~~WL~~~L~~ 262 (320)
+|.+. ||.... ......|.+|.||+ +.|.+||+... -..+..|.+||++.|..
T Consensus 274 AyyE~--mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~ 351 (522)
T COG3540 274 AYYEH--MPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA 351 (522)
T ss_pred HHHHh--CccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh
Confidence 33332 343321 11357799999999 68999998321 01358899999999998
Q ss_pred CCCCCCCEEEEEecccceecC--CC-----------CCCccHHHHHHHHHHHHhCCCc--EEEecCccc
Q 045849 263 VNRSETPWLIVLMHAPWYNSY--NY-----------HYMEGETMRVMYEPWLVKYKVD--VVFAGHVHA 316 (320)
Q Consensus 263 ~~~~~~~~~iv~~H~P~~~~~--~~-----------~~~~~~~~~~~l~~l~~~~~v~--lvl~GH~H~ 316 (320)
+++.|+|+..-.|+-... .. .+.....-|++|..+|...++. ++|+|.+|.
T Consensus 352 ---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~ 417 (522)
T COG3540 352 ---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHY 417 (522)
T ss_pred ---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHH
Confidence 789999999998873211 10 1112234589999999999876 889999996
No 11
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.92 E-value=4.9e-24 Score=184.36 Aligned_cols=176 Identities=19% Similarity=0.208 Sum_probs=121.1
Q ss_pred EEEEEEcCCCCCCc---------HHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCe
Q 045849 119 SFGLIGDLGQSYDS---------NVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPW 185 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---------~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (320)
||++++|+|.+... ...++ .+.+...+||+||++||+++... ...++.+.+.++.+ .+|+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~~--~~p~ 73 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-----PESYERLRELLAAL--PIPV 73 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-----HHHHHHHHHHHhhc--CCCE
Confidence 69999999987431 22333 33333238999999999997532 23456666666664 7899
Q ss_pred EeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CCChHHHHHHHHhcc
Q 045849 186 IWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GKYTPQYKWLEEELP 261 (320)
Q Consensus 186 ~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~q~~WL~~~L~ 261 (320)
++++||||... .+...|..... .....+|+|+.++++|++||+.... ....+|++||++.|+
T Consensus 74 ~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~ 139 (240)
T cd07402 74 YLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALA 139 (240)
T ss_pred EEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHH
Confidence 99999999841 11111211000 1235678999999999999986432 135789999999999
Q ss_pred cCCCCCCCEEEEEecccceecCCCC-CCccHHHHHHHHHHHHhC-CCcEEEecCccccc
Q 045849 262 KVNRSETPWLIVLMHAPWYNSYNYH-YMEGETMRVMYEPWLVKY-KVDVVFAGHVHAYE 318 (320)
Q Consensus 262 ~~~~~~~~~~iv~~H~P~~~~~~~~-~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 318 (320)
+.. .+++|+++|+|++...... .......++++.+++.++ +|+++|+||.|...
T Consensus 140 ~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~ 195 (240)
T cd07402 140 EAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPI 195 (240)
T ss_pred hCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchH
Confidence 853 4568999999997653211 011122367899999999 99999999999865
No 12
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.91 E-value=1.6e-23 Score=182.08 Aligned_cols=186 Identities=19% Similarity=0.230 Sum_probs=117.9
Q ss_pred EEEEEcCCCCCCcH-------HHHHHHHhCCCCCceEEEcccccccCCCCC----CCChhhhhHHHHHhhhhc--cCCeE
Q 045849 120 FGLIGDLGQSYDSN-------VTLTHYERNPRKGQTLLFVGDLSYADNYPC----HDNNRWDTWGRFVERSAA--YQPWI 186 (320)
Q Consensus 120 f~~~gD~~~~~~~~-------~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~P~~ 186 (320)
|++++|+|.+.... ..+...++. .+||+||++||+++...... .....|+.|.+.+..... ..|++
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWF 80 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEE
Confidence 78999999864311 112223333 38999999999996532110 123467777776655432 58999
Q ss_pred eCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEE--EEeCcEEEEEEcccCC----------CCCChHHHH
Q 045849 187 WTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYS--IKRASVYIIVLSSYSA----------YGKYTPQYK 254 (320)
Q Consensus 187 ~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys--~~~g~v~fi~lds~~~----------~~~~~~q~~ 254 (320)
.++||||.......... ...|.+...... ....+|. +..|+++||+|||... ....++|++
T Consensus 81 ~v~GNHD~~~~~~~~~~--~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 81 DIRGNHDLFNIPSLDSE--NNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred EeCCCCCcCCCCCccch--hhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 99999999522211111 111221111110 1122333 3458999999999632 123489999
Q ss_pred HHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 255 WLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 255 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
||++.|++. .+.+++||++|+|+....... ....+ .+.++|++++|+++||||.|.+++
T Consensus 154 wL~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~ 212 (256)
T cd07401 154 RLEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGG 212 (256)
T ss_pred HHHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCc
Confidence 999999875 345689999999996532211 11222 399999999999999999999986
No 13
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.89 E-value=3.6e-22 Score=175.85 Aligned_cols=185 Identities=17% Similarity=0.195 Sum_probs=115.0
Q ss_pred EECCCCCCCCCCeEEEEEEcCCCCCC---------cHHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhH
Q 045849 106 FVTPPEVGPDVPYSFGLIGDLGQSYD---------SNVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTW 172 (320)
Q Consensus 106 F~t~p~~~~~~~~~f~~~gD~~~~~~---------~~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~ 172 (320)
.+|.+.. ..++||++++|+|.... .... ++.+.+...+|||||++||++.... ...+..+
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-----~~~~~~~ 77 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-----SEAYQHF 77 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-----HHHHHHH
Confidence 3554433 36899999999996321 1222 3344343247999999999996421 2345555
Q ss_pred HHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC----CC
Q 045849 173 GRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY----GK 248 (320)
Q Consensus 173 ~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~ 248 (320)
.+.++.+ .+|+++++||||.... +...+... + ....++.+..++++||+|||.... ..
T Consensus 78 ~~~l~~l--~~Pv~~v~GNHD~~~~-----------~~~~~~~~--~---~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l 139 (275)
T PRK11148 78 AEGIAPL--RKPCVWLPGNHDFQPA-----------MYSALQDA--G---ISPAKHVLIGEHWQILLLDSQVFGVPHGEL 139 (275)
T ss_pred HHHHhhc--CCcEEEeCCCCCChHH-----------HHHHHhhc--C---CCccceEEecCCEEEEEecCCCCCCcCCEe
Confidence 5555554 5899999999998411 11111100 0 111233344456999999995421 13
Q ss_pred ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCC-CCCCccHHHHHHHHHHHHhC-CCcEEEecCccccc
Q 045849 249 YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYN-YHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAYE 318 (320)
Q Consensus 249 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~ 318 (320)
..+|++||++.|++.. .+..||++||||..... +.......-.++|.++++++ +|+++|+||+|...
T Consensus 140 ~~~ql~wL~~~L~~~~---~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~ 208 (275)
T PRK11148 140 SEYQLEWLERKLADAP---ERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQEL 208 (275)
T ss_pred CHHHHHHHHHHHhhCC---CCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHH
Confidence 5899999999998852 23466767765544322 11111122356899999998 89999999999753
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.89 E-value=2.3e-22 Score=170.32 Aligned_cols=149 Identities=21% Similarity=0.283 Sum_probs=107.1
Q ss_pred eEEEEEEcCCCCCCc-H----HHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccCCeEeCC
Q 045849 118 YSFGLIGDLGQSYDS-N----VTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQPWIWTA 189 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~-~----~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~~ 189 (320)
|||++++|+|..... . ..++.+++.. .+||+||++||+++... ...+|..+.+.++.+. ..+|+++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~----~~~~~~~~~~~~~~l~~~~~p~~~~~ 76 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD----NDAEWEAADKAFARLDKAGIPYSVLA 76 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC----CHHHHHHHHHHHHHHHHcCCcEEEEC
Confidence 689999999975432 1 1222332221 38999999999997532 1357888888888886 679999999
Q ss_pred CCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCC
Q 045849 190 GNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETP 269 (320)
Q Consensus 190 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~ 269 (320)
||||. ++.+|+ ....+|++||++.|++. +.+
T Consensus 77 GNHD~------------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~---~~~ 107 (214)
T cd07399 77 GNHDL------------------------------------------VLALEF----GPRDEVLQWANEVLKKH---PDR 107 (214)
T ss_pred CCCcc------------------------------------------hhhCCC----CCCHHHHHHHHHHHHHC---CCC
Confidence 99993 122222 12489999999999974 334
Q ss_pred EEEEEecccceecCCCCCCc-----cHHHHHHHHHHHHhC-CCcEEEecCcccccc
Q 045849 270 WLIVLMHAPWYNSYNYHYME-----GETMRVMYEPWLVKY-KVDVVFAGHVHAYER 319 (320)
Q Consensus 270 ~~iv~~H~P~~~~~~~~~~~-----~~~~~~~l~~l~~~~-~v~lvl~GH~H~y~R 319 (320)
++||++|+|++......... ....++.|.++++++ +|++||+||.|.+.|
T Consensus 108 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~ 163 (214)
T cd07399 108 PAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGR 163 (214)
T ss_pred CEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCce
Confidence 58999999998654332111 123456788999999 799999999999876
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.85 E-value=5.1e-21 Score=170.54 Aligned_cols=193 Identities=20% Similarity=0.253 Sum_probs=122.6
Q ss_pred EEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCCh----hhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 122 LIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNN----RWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 122 ~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
-+|+.+.... ...+++.+.+...+|||||++||++..+........ .+..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3566664332 123444555543489999999999987653211111 244455666666678999999999998
Q ss_pred ccCCCCCC----cccCcccceeee--CCCCC-CCCCCCcEEEEE-eCcEEEEEEcccCCC-----------CCChHHHHH
Q 045849 195 DFYPEIGE----TVPFKPYSHRYH--VPYRA-SGSTAPFWYSIK-RASVYIIVLSSYSAY-----------GKYTPQYKW 255 (320)
Q Consensus 195 ~~~~~~~~----~~~~~~~~~~f~--~p~~~-~~~~~~~~ys~~-~g~v~fi~lds~~~~-----------~~~~~q~~W 255 (320)
........ ...+..+...|. +|... .....+.||++. .++++||+|||.... ....+|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 63221111 001111112221 22111 111346789988 789999999995421 124789999
Q ss_pred HHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCC--CcEEEecCccccc
Q 045849 256 LEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYK--VDVVFAGHVHAYE 318 (320)
Q Consensus 256 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~y~ 318 (320)
|+++|+++++.+ ..++|++|+|+....... ....+++|.+++++|. |.++|+||+|..+
T Consensus 202 L~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~ 262 (296)
T cd00842 202 LEDELQEAEQAG-EKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDE 262 (296)
T ss_pred HHHHHHHHHHCC-CeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccce
Confidence 999999864333 457899999997754321 1356789999999997 7889999999854
No 16
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.81 E-value=5.4e-19 Score=153.08 Aligned_cols=167 Identities=20% Similarity=0.264 Sum_probs=105.5
Q ss_pred HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhh-H---HHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccc
Q 045849 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDT-W---GRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYS 210 (320)
Q Consensus 135 ~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~ 210 (320)
.+..+.+. .+||+||++||+++.+.. ....+|.. + .+.+..+...+|++.++||||+....... ......|.
T Consensus 36 ~~~~~~~~-l~PD~vv~lGDL~d~G~~--~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~~~~~rf~ 111 (257)
T cd08163 36 NWRYMQKQ-LKPDSTIFLGDLFDGGRD--WADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-LPVRQRFE 111 (257)
T ss_pred HHHHHHHh-cCCCEEEEecccccCCee--CcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-HHHHHHHH
Confidence 34444454 389999999999975331 12244543 3 33333222347999999999986432111 11123344
Q ss_pred eeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-----CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCC
Q 045849 211 HRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY-----GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNY 285 (320)
Q Consensus 211 ~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-----~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 285 (320)
+.|. ...|++.+|+++||+|||.... .....|.+||++.|+... ....+||++|+|+|.....
T Consensus 112 ~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~p~ILl~H~Plyr~~~~ 179 (257)
T cd08163 112 KYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV--KSKPRILLTHVPLYRPPNT 179 (257)
T ss_pred HHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC--CCCcEEEEeccccccCCCC
Confidence 4442 2357899999999999995421 234679999999988642 2334899999999875332
Q ss_pred CCC------------ccHH----H-HHHHHHHHHhCCCcEEEecCcccc
Q 045849 286 HYM------------EGET----M-RVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 286 ~~~------------~~~~----~-~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
.+. .+.. + .+.-..||++.+..+||+||+|.|
T Consensus 180 ~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~ 228 (257)
T cd08163 180 SCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDY 228 (257)
T ss_pred CCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcc
Confidence 110 0100 1 233447788889999999999987
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.79 E-value=1.6e-20 Score=153.25 Aligned_cols=190 Identities=21% Similarity=0.227 Sum_probs=100.8
Q ss_pred eEEEEEEcCCCCCCcH----HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHH-HHHhhhhccCCeEeCCCCC
Q 045849 118 YSFGLIGDLGQSYDSN----VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWG-RFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~~~~~GNH 192 (320)
|||+++||+|...... ..+...... .++|+||++||+++.... ...+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~-~~~d~ii~~GD~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAE-NKPDFIIFLGDLVDGGNP----SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHH-TTTSEEEEESTSSSSSSH----HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhcc-CCCCEEEeeccccccccc----cccchhhhccchhhhhcccccccccccc
Confidence 6999999999875433 233333333 399999999999976431 11111111 1233446789999999999
Q ss_pred ccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCC---hHHHHHHHHhcccCCCCCCC
Q 045849 193 EIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKY---TPQYKWLEEELPKVNRSETP 269 (320)
Q Consensus 193 D~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~---~~q~~WL~~~L~~~~~~~~~ 269 (320)
|+........... .................... .........+............ ..+..|+...++. ...+
T Consensus 76 D~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 150 (200)
T PF00149_consen 76 DYYSGNSFYGFYD-YQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDD 150 (200)
T ss_dssp SSHHHHHHHHHHH-HHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEES
T ss_pred ccceecccccccc-ccccccccccccccccCcce-eeecccccccccccccccccccccchhccccccccccc---cccc
Confidence 9963210000000 00000000000000000000 1112222222222211111111 2233334344433 4567
Q ss_pred EEEEEecccceecCCCCCC--ccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 270 WLIVLMHAPWYNSYNYHYM--EGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 270 ~~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
++||++|+|+++....... .....++.+..++.+++|+++|+||+|.|
T Consensus 151 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 151 PVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 8999999999987654210 12356789999999999999999999987
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.76 E-value=4e-18 Score=143.09 Aligned_cols=148 Identities=19% Similarity=0.198 Sum_probs=96.8
Q ss_pred CeEEEEEEcCCCCCCc------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccC
Q 045849 117 PYSFGLIGDLGQSYDS------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQ 183 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 183 (320)
.+||++++|+|..... ...+.++++. .+||+||++||+++..... ...+..+.+.++.+. ..+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~---~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTN---DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCc---hHHHHHHHHHHHHHHHcCC
Confidence 6899999999986432 1234444444 4899999999999764421 112445555555553 369
Q ss_pred CeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccC
Q 045849 184 PWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKV 263 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~ 263 (320)
|+++++||||. .-.....|++||++.|++.
T Consensus 78 p~~~~~GNHD~--------------------------------------------------~g~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDG--------------------------------------------------YDWIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCC--------------------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 99999999991 0012378999999999885
Q ss_pred C--CCCCCEEEEEecccceecCCC---------CCCc---cHHHHHHHH-HHHHhCCCcEEEecCccccc
Q 045849 264 N--RSETPWLIVLMHAPWYNSYNY---------HYME---GETMRVMYE-PWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 264 ~--~~~~~~~iv~~H~P~~~~~~~---------~~~~---~~~~~~~l~-~l~~~~~v~lvl~GH~H~y~ 318 (320)
. +....+.++++|+|+...... ...+ .......+. .+.+..+|+++|+||+|.++
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~ 177 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGND 177 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcc
Confidence 2 223457999999998653210 0001 111223344 44566799999999999865
No 19
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.72 E-value=7.5e-17 Score=139.20 Aligned_cols=176 Identities=18% Similarity=0.153 Sum_probs=103.4
Q ss_pred EEEEEEcCCCCCCc---HHHH----HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCC
Q 045849 119 SFGLIGDLGQSYDS---NVTL----THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGN 191 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---~~~l----~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 191 (320)
||++++|+|..... ...+ +.+.+. ++|+||++||++... .....+.+.+.++ ...|++.++||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~--~~d~vv~~GDl~~~~-------~~~~~~~~~l~~~-~~~pv~~v~GN 70 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ--KIDHLHIAGDISNDF-------QRSLPFIEKLQEL-KGIKVTFNAGN 70 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc--CCCEEEECCccccch-------hhHHHHHHHHHHh-cCCcEEEECCC
Confidence 58999999975322 2222 233333 899999999999531 1122333333332 45899999999
Q ss_pred CccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-------------------------
Q 045849 192 HEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY------------------------- 246 (320)
Q Consensus 192 HD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~------------------------- 246 (320)
||+...... ..+...+. + ....+.++.+..++++|++++...++
T Consensus 71 HD~~~~~~~------~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (239)
T TIGR03729 71 HDMLKDLTY------EEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIK 139 (239)
T ss_pred CCCCCCCCH------HHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccC
Confidence 998411110 11111110 0 00122233344467888888731111
Q ss_pred -C-----CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCC------CCCCc-c-HHHHHHHHHHHHhCCCcEEEec
Q 045849 247 -G-----KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYN------YHYME-G-ETMRVMYEPWLVKYKVDVVFAG 312 (320)
Q Consensus 247 -~-----~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~------~~~~~-~-~~~~~~l~~l~~~~~v~lvl~G 312 (320)
. ....|++||++.|++.. .+.+||++|+||..... ..+.. . ....+.|.+++++++|+++|+|
T Consensus 140 ~~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~G 216 (239)
T TIGR03729 140 RPMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFG 216 (239)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEEC
Confidence 0 12678999999998752 23489999999865211 11111 0 1114688999999999999999
Q ss_pred Cccccc
Q 045849 313 HVHAYE 318 (320)
Q Consensus 313 H~H~y~ 318 (320)
|.|.-.
T Consensus 217 H~H~~~ 222 (239)
T TIGR03729 217 HLHRRF 222 (239)
T ss_pred CccCCC
Confidence 999753
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.70 E-value=2.4e-16 Score=143.98 Aligned_cols=92 Identities=16% Similarity=0.241 Sum_probs=70.5
Q ss_pred CCcEEEEE-eCcEEEEEEcccCCC-----CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCC-C----CccHH
Q 045849 224 APFWYSIK-RASVYIIVLSSYSAY-----GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYH-Y----MEGET 292 (320)
Q Consensus 224 ~~~~ys~~-~g~v~fi~lds~~~~-----~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~----~~~~~ 292 (320)
+..||+|+ .++++||+|||.... ...++|++||+++|++. +.+++||++|||++...... . .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996431 23589999999999973 44679999999998754311 0 01112
Q ss_pred HHHHHHHHHHhC-CCcEEEecCccccc
Q 045849 293 MRVMYEPWLVKY-KVDVVFAGHVHAYE 318 (320)
Q Consensus 293 ~~~~l~~l~~~~-~v~lvl~GH~H~y~ 318 (320)
..++|.++|++| +|.++||||.|...
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~ 393 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNK 393 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCc
Confidence 356899999999 89999999999754
No 21
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.69 E-value=3.5e-16 Score=129.93 Aligned_cols=166 Identities=11% Similarity=0.063 Sum_probs=99.6
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCC
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPE 199 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~ 199 (320)
|+++||+|........ ..+ .. .++|+||++||+++... ......+ +.++. ...|+++++||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~-~~-~~~D~vv~~GDl~~~~~-----~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~~- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IIL-KA-EEADAVIVAGDITNFGG-----KEAAVEI-NLLLA--IGVPVLAVPGNCDTPEIL- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHh-hc-cCCCEEEECCCccCcCC-----HHHHHHH-HHHHh--cCCCEEEEcCCCCCHHHH-
Confidence 5789999986532222 222 33 38999999999996432 1111112 33332 367999999999974210
Q ss_pred CCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC------CCCChHHHHHHHHhcccCCCCCCCEEEE
Q 045849 200 IGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA------YGKYTPQYKWLEEELPKVNRSETPWLIV 273 (320)
Q Consensus 200 ~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~------~~~~~~q~~WL~~~L~~~~~~~~~~~iv 273 (320)
......... ..+ ..+.++++.|+++++... ....++|++|+ +.|+. ...+.+|+
T Consensus 69 -------~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~il 128 (188)
T cd07392 69 -------GLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLIL 128 (188)
T ss_pred -------HhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEE
Confidence 000000000 111 234567899999987421 12346889998 44443 23345899
Q ss_pred EecccceecCCCCCCcc-HHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 274 LMHAPWYNSYNYHYMEG-ETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 274 ~~H~P~~~~~~~~~~~~-~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
++|+||+.......... ..-.+.+..++++++++++|+||.|.-
T Consensus 129 v~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~ 173 (188)
T cd07392 129 VTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHES 173 (188)
T ss_pred EECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEeccccc
Confidence 99999976311111111 112467888999999999999999974
No 22
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.68 E-value=1.7e-16 Score=136.13 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=101.3
Q ss_pred EEEEEcCCCCCC--------c---HHHHHHHHh----CCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 120 FGLIGDLGQSYD--------S---NVTLTHYER----NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 120 f~~~gD~~~~~~--------~---~~~l~~~~~----~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
+.+++|+|.... . ...++++.+ ...+||+||++||+++... ........+.++.+ ..|
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~-----~~~~~~~l~~l~~l--~~~ 73 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK-----LEEAKLDLAWIDAL--PGT 73 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC-----hHHHHHHHHHHHhC--CCC
Confidence 357899997631 1 233333322 1248999999999984321 11222223333332 347
Q ss_pred eEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccC----CC-------------C
Q 045849 185 WIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYS----AY-------------G 247 (320)
Q Consensus 185 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~----~~-------------~ 247 (320)
+++++||||+. .... ..+.+.+ +..+. ......++.++++.|++++... .. .
T Consensus 74 v~~V~GNHD~~-~~~~------~~~~~~l--~~~~~--~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 74 KVLLKGNHDYW-WGSA------SKLRKAL--EESRL--ALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred eEEEeCCcccc-CCCH------HHHHHHH--HhcCe--EEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 89999999983 1110 1111111 00000 0000233556788999876311 10 0
Q ss_pred CChHHHHHHHHhcccCCCC-CCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 248 KYTPQYKWLEEELPKVNRS-ETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 248 ~~~~q~~WL~~~L~~~~~~-~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
....|+.||++.|+++... ...++|+++|+|++..... .+.+..++++++++++|+||+|.+++
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl~GH~H~~~~ 207 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICVYGHLHGVGR 207 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEEECCCCCCcc
Confidence 1256899999999875322 2246899999999775421 23667888999999999999998764
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.63 E-value=4.2e-15 Score=132.35 Aligned_cols=179 Identities=21% Similarity=0.202 Sum_probs=111.2
Q ss_pred eEEEEEEcCCCC--CC-cHHHH----HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCC
Q 045849 118 YSFGLIGDLGQS--YD-SNVTL----THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAG 190 (320)
Q Consensus 118 ~~f~~~gD~~~~--~~-~~~~l----~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~G 190 (320)
++|+.++|.|.. .. ....+ +.+. . .+||+||++||+++. + .....+...++++......|+++++|
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~-~-~~~D~~v~tGDl~~~-~----~~~~~~~~~~~l~~~~~~~~~~~vpG 73 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIE-Q-LKPDLLVVTGDLTND-G----EPEEYRRLKELLARLELPAPVIVVPG 73 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHh-c-CCCCEEEEccCcCCC-C----CHHHHHHHHHHHhhccCCCceEeeCC
Confidence 589999999988 22 22233 3333 2 388999999999976 2 12334455556664556789999999
Q ss_pred CCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEe-CcEEEEEEcccCCC----CCChHHHHHHHHhcccCCC
Q 045849 191 NHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKR-ASVYIIVLSSYSAY----GKYTPQYKWLEEELPKVNR 265 (320)
Q Consensus 191 NHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~~----~~~~~q~~WL~~~L~~~~~ 265 (320)
|||...... ..+...+... ...+-.... ++++++.+|+.... ..+..|++||++.|++...
T Consensus 74 NHD~~~~~~-------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~ 139 (301)
T COG1409 74 NHDARVVNG-------EAFSDQFFNR-------YAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPE 139 (301)
T ss_pred CCcCCchHH-------HHhhhhhccc-------CcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCcc
Confidence 999853210 1111111110 001111112 67899999996532 2468999999999998532
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCC--CcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYK--VDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~y 317 (320)
.....+|+++|||+.............-...+..++..++ |+++|+||.|.-
T Consensus 140 ~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 140 RAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred ccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 2112457777777766444332222233456777888888 999999999975
No 24
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.61 E-value=4.8e-15 Score=120.77 Aligned_cols=143 Identities=17% Similarity=0.273 Sum_probs=85.8
Q ss_pred EEEEEcCCCCCCcHHHH-HHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCC
Q 045849 120 FGLIGDLGQSYDSNVTL-THYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l-~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 198 (320)
|+++||+|.+....... .+.... .++|+|+++||+++... ...+...........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~-~~~d~li~~GDi~~~~~--------~~~~~~~~~~~~~~~~v~~v~GNHD~~--- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIA-PDADILVLAGDIGYLTD--------APRFAPLLLALKGFEPVIYVPGNHEFY--- 68 (166)
T ss_pred CceEccccccCccccccccccCCC-CCCCEEEECCCCCCCcc--------hHHHHHHHHhhcCCccEEEeCCCcceE---
Confidence 57899999875433221 121222 48999999999996422 112221233334678999999999983
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCC-ChHHHHHHHHhcccCCCCCCCEEEEEecc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGK-YTPQYKWLEEELPKVNRSETPWLIVLMHA 277 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~-~~~q~~WL~~~L~~~~~~~~~~~iv~~H~ 277 (320)
+.|++..-..++.. .+++.+|+.++++ +.+||++|+
T Consensus 69 ------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~Hh 105 (166)
T cd07404 69 ------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHH 105 (166)
T ss_pred ------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCC
Confidence 11111111111111 1234455544444 248999999
Q ss_pred cceecCCCC-C---CccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 278 PWYNSYNYH-Y---MEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 278 P~~~~~~~~-~---~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
||+...... . ..+...++.+..++++.+|+++++||+|..
T Consensus 106 pP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~ 149 (166)
T cd07404 106 APSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFN 149 (166)
T ss_pred CCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCcccc
Confidence 998754221 1 112244566888888999999999999975
No 25
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.59 E-value=4.1e-14 Score=119.55 Aligned_cols=175 Identities=11% Similarity=0.110 Sum_probs=101.9
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCCcc
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNHEI 194 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~ 194 (320)
...|++++||+|......+.+.+..+. .++|+||++||+++... ..+.+..+++.+.. ..|+++++||||.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~-~~~D~vv~~GDl~~~g~-------~~~~~~~~l~~l~~l~~pv~~V~GNhD~ 74 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPE-TGADAIVLIGNLLPKAA-------KSEDYAAFFRILGEAHLPTFYVPGPQDA 74 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhh-cCCCEEEECCCCCCCCC-------CHHHHHHHHHHHHhcCCceEEEcCCCCh
Confidence 467999999999754333333333333 38999999999996421 12334444444432 4799999999997
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEe-CcEEEEEEcccCCC--CCChHHH----HHHHH----hcccC
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKR-ASVYIIVLSSYSAY--GKYTPQY----KWLEE----ELPKV 263 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~~--~~~~~q~----~WL~~----~L~~~ 263 (320)
....... ..|...-..|... ...+.+ ..+ |+++|++|+....+ ...++|. +||.+ .+.+.
T Consensus 75 ~v~~~l~-----~~~~~~~~~p~~~--~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~ 145 (224)
T cd07388 75 PLWEYLR-----EAYNAELVHPEIR--NVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL 145 (224)
T ss_pred HHHHHHH-----HHhcccccCccce--ecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC
Confidence 3100000 0111000011100 011122 333 56999999865433 2234442 56433 33332
Q ss_pred CCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcc
Q 045849 264 NRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVH 315 (320)
Q Consensus 264 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 315 (320)
..+..|+++|+||+.....+ .-.+.+..++++++..+++|||.|
T Consensus 146 ---~~~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 146 ---KDYRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred ---CCCCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 23458999999999874222 224577889999999999999988
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.58 E-value=1.3e-14 Score=115.24 Aligned_cols=115 Identities=21% Similarity=0.223 Sum_probs=82.0
Q ss_pred EEEEEcCCCCCCcHH----H------HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhcc-CCeEeC
Q 045849 120 FGLIGDLGQSYDSNV----T------LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAY-QPWIWT 188 (320)
Q Consensus 120 f~~~gD~~~~~~~~~----~------l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~~ 188 (320)
|++++|+|.+..... . +...... .++|+|+++||+++... ...+..+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GDl~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKA-LDPDLVVITGDLTQRGL-----PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhc-cCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998653211 1 1122223 48999999999997532 24566777777776544 699999
Q ss_pred CCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCC
Q 045849 189 AGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSET 268 (320)
Q Consensus 189 ~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~ 268 (320)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999996
Q ss_pred CEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 269 PWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 269 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
|+++|+|++....... .....++.+.+++++++++++++||+|...
T Consensus 81 ---iv~~Hhp~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~ 126 (144)
T cd07400 81 ---IVVLHHPLVPPPGSGR-ERLLDAGDALKLLAEAGVDLVLHGHKHVPY 126 (144)
T ss_pred ---EEEecCCCCCCCcccc-ccCCCHHHHHHHHHHcCCCEEEECCCCCcC
Confidence 8999999977543211 111146679999999999999999999864
No 27
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.57 E-value=1.1e-14 Score=124.47 Aligned_cols=162 Identities=16% Similarity=0.059 Sum_probs=93.9
Q ss_pred CeEEEEEEcCCCCCCc-----HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCC
Q 045849 117 PYSFGLIGDLGQSYDS-----NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGN 191 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~-----~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 191 (320)
++||++++|+|..... .+.++.+.+ .+||+||++||+++.... .. ..+.+.++.+....|+++++||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~--~~~d~vl~~GD~~~~~~~-----~~-~~~~~~l~~l~~~~~v~~v~GN 72 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINA--LKPDLVVLTGDLVDGSVD-----VL-ELLLELLKKLKAPLGVYAVLGN 72 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhc--cCCCEEEEcCcccCCcch-----hh-HHHHHHHhccCCCCCEEEECCC
Confidence 4799999999987532 122333333 389999999999975431 11 3455666666667899999999
Q ss_pred CccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEE
Q 045849 192 HEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWL 271 (320)
Q Consensus 192 HD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~ 271 (320)
||+...... . +....+...+. ...+.+..+..++..+..+... ......+++.+.+++. .+.++.
T Consensus 73 HD~~~~~~~-~---~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~----~~~~~~~~~~~~~~~~--~~~~~~ 137 (223)
T cd07385 73 HDYYSGDEE-N---WIEALESAGIT-----VLRNESVEISVGGATIGIAGVD----DGLGRRPDLEKALKGL--DEDDPN 137 (223)
T ss_pred cccccCchH-H---HHHHHHHcCCE-----EeecCcEEeccCCeEEEEEecc----CccccCCCHHHHHhCC--CCCCCE
Confidence 998532110 0 00011100000 0122344455555443332211 1112234566666653 344578
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
|++.|.|.+... +.+.++|++++||+|..+
T Consensus 138 I~l~H~P~~~~~-----------------~~~~~~dl~l~GHtHggq 167 (223)
T cd07385 138 ILLAHQPDTAEE-----------------AAAWGVDLQLSGHTHGGQ 167 (223)
T ss_pred EEEecCCChhHH-----------------hcccCccEEEeccCCCCE
Confidence 999998764321 146799999999999865
No 28
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.57 E-value=2.4e-14 Score=122.17 Aligned_cols=186 Identities=17% Similarity=0.074 Sum_probs=103.0
Q ss_pred EEEEEEcCCCCCCc------------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-cc
Q 045849 119 SFGLIGDLGQSYDS------------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AY 182 (320)
Q Consensus 119 ~f~~~gD~~~~~~~------------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (320)
||++++|+|.+... ..+++++. .+ .++|+||++||+++.... ....+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~~~GD~~~~~~~---~~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIE-EKVDFVLIAGDLFDSNNP---SPEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHh-cCCCEEEECCcccCCCCC---CHHHHHHHHHHHHHHHHCC
Confidence 68999999986421 12233332 22 389999999999965321 2234555666666654 47
Q ss_pred CCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhccc
Q 045849 183 QPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPK 262 (320)
Q Consensus 183 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~ 262 (320)
+|+++++||||....... ......+......- ............+..+++.|++++..... ....+.++++..+..
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVG-VEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCcEEEEc-ccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999998632111 00000011111000 00000111223344456888888753321 113344444445444
Q ss_pred CCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 263 VNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 263 ~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
. .....+|+++|.|+.......... .......+...++|++++||.|..+
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~ 202 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQ 202 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCe
Confidence 3 345569999999987654321111 1233445567899999999999864
No 29
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.55 E-value=1.1e-13 Score=125.29 Aligned_cols=91 Identities=23% Similarity=0.294 Sum_probs=63.5
Q ss_pred CcEEEEE-eCcE--EEEEEcccCC---------C--CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCC-CC--C
Q 045849 225 PFWYSIK-RASV--YIIVLSSYSA---------Y--GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYN-YH--Y 287 (320)
Q Consensus 225 ~~~ys~~-~g~v--~fi~lds~~~---------~--~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~--~ 287 (320)
..||+|+ .|++ +||+||+... + ...++|++||+++|+.... +.+++|+++|+|+.+... .. +
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 3499999 5855 9999998541 1 1358999999999998632 456778878888765221 10 0
Q ss_pred C----------ccHHHHHHHHHHHHhC-CCcEEEecCccc
Q 045849 288 M----------EGETMRVMYEPWLVKY-KVDVVFAGHVHA 316 (320)
Q Consensus 288 ~----------~~~~~~~~l~~l~~~~-~v~lvl~GH~H~ 316 (320)
. .+...-.+|..+|++| +|.++||||.|.
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHr 410 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHL 410 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccc
Confidence 0 0011124899999999 788999999995
No 30
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.49 E-value=2.7e-13 Score=119.02 Aligned_cols=160 Identities=16% Similarity=0.082 Sum_probs=90.9
Q ss_pred CCCeEEEEEEcCCCCCC-cHHHHH----HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCC
Q 045849 115 DVPYSFGLIGDLGQSYD-SNVTLT----HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTA 189 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~-~~~~l~----~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (320)
..++||++++|+|.+.. ....++ .+.+ .+||+|+++||+++.+. ...+..+.+.++.+....|+++++
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~--~~pDlVli~GD~~d~~~-----~~~~~~~~~~L~~L~~~~pv~~V~ 119 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIE--QKPDLILLGGDYVLFDM-----PLNFSAFSDVLSPLAECAPTFACF 119 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHh--cCCCEEEEccCcCCCCc-----cccHHHHHHHHHHHhhcCCEEEec
Confidence 35799999999998632 222233 3333 39999999999996321 123455667777777778999999
Q ss_pred CCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCc--EEEEEEcccCCCCCChHHHHHHHHhcccCCCCC
Q 045849 190 GNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRAS--VYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSE 267 (320)
Q Consensus 190 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~--v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~ 267 (320)
||||+....... ..+....+.. +..-..+....+..++ +.++++|.... +... ..+.+++
T Consensus 120 GNHD~~~~~~~~--~~~~~~l~~~-----gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----- 181 (271)
T PRK11340 120 GNHDRPVGTEKN--HLIGETLKSA-----GITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----- 181 (271)
T ss_pred CCCCcccCccch--HHHHHHHHhc-----CcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC-----
Confidence 999985221000 0000111110 0001123344444443 66777763211 1101 1122222
Q ss_pred CCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 268 TPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 268 ~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
...+|++.|.|-.-. .+.+.++||+||||+|-
T Consensus 182 ~~~~IlL~H~P~~~~-----------------~~~~~~~dL~lsGHTHG 213 (271)
T PRK11340 182 NLPRLVLAHNPDSKE-----------------VMRDEPWDLMLCGHTHG 213 (271)
T ss_pred CCCeEEEEcCCChhH-----------------hhccCCCCEEEeccccC
Confidence 235899999997532 12357899999999995
No 31
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.48 E-value=8.1e-13 Score=114.26 Aligned_cols=193 Identities=19% Similarity=0.258 Sum_probs=105.8
Q ss_pred CCCeEEEEEEcCCCCCC--------------------cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHH
Q 045849 115 DVPYSFGLIGDLGQSYD--------------------SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR 174 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~ 174 (320)
.++|||+.++|+|.+.. ...-+.++++. ++||||+++||++++... ...-..+.+
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~s-E~PDlVVfTGD~i~g~~t----~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLAS-EKPDLVVFTGDNIFGHST----QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhc-cCCCEEEEeCCccccccc----HhHHHHHHH
Confidence 57899999999997643 11235566666 599999999999986331 112234566
Q ss_pred HHhhh-hccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCC--CCCC-CC--------CcEEEEEeC---------
Q 045849 175 FVERS-AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYR--ASGS-TA--------PFWYSIKRA--------- 233 (320)
Q Consensus 175 ~~~~~-~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~--~~~~-~~--------~~~ys~~~g--------- 233 (320)
.+.|. ..++||.++.||||-.......+. ..+.. .+|.. .... .+ +.|-...+|
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~ltr~ql---~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLTRLQL---MKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccCHHHH---HHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 66664 578999999999998632110000 00000 01100 0000 00 111111111
Q ss_pred -cEEEEEEcccCC---------CC-CChHHHHHHHHhcccC---CCCCCC-EEEEEecccce--ecCCCC------CCcc
Q 045849 234 -SVYIIVLSSYSA---------YG-KYTPQYKWLEEELPKV---NRSETP-WLIVLMHAPWY--NSYNYH------YMEG 290 (320)
Q Consensus 234 -~v~fi~lds~~~---------~~-~~~~q~~WL~~~L~~~---~~~~~~-~~iv~~H~P~~--~~~~~~------~~~~ 290 (320)
-..+++||+... |+ ..+.|..||+..-.+. +..-.| .-++++|.|+- ..-... ..++
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 124556665321 22 2378999998876321 111122 36889999983 221111 0111
Q ss_pred ---HHHHHHHHHHHH-hCCCcEEEecCcccc
Q 045849 291 ---ETMRVMYEPWLV-KYKVDVVFAGHVHAY 317 (320)
Q Consensus 291 ---~~~~~~l~~l~~-~~~v~lvl~GH~H~y 317 (320)
......+...|. ..+|++|++||+|+.
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvN 311 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVN 311 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEecccccc
Confidence 122345666666 789999999999974
No 32
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.45 E-value=1e-12 Score=101.75 Aligned_cols=116 Identities=24% Similarity=0.290 Sum_probs=82.0
Q ss_pred EEEEcCCCCCCcHHHHH--HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCC
Q 045849 121 GLIGDLGQSYDSNVTLT--HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 121 ~~~gD~~~~~~~~~~l~--~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 198 (320)
+++||+|.......... ...+. .++|+||++||+++.... ..+..+...........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~-~~~~~vi~~GD~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAA-EKPDFVLVLGDLVGDGPD-----PEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcc-cCCCEEEECCcccCCCCC-----chHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899998765443322 22233 499999999999976432 222333223334457899999999999
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEeccc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAP 278 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P 278 (320)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8999999
Q ss_pred ceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccccC
Q 045849 279 WYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYERS 320 (320)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~Rt 320 (320)
++.............++.+..++.+.+++++|+||.|.+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~ 118 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERR 118 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeeccccc
Confidence 987654332222225788899999999999999999999863
No 33
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.34 E-value=7.5e-12 Score=98.27 Aligned_cols=116 Identities=17% Similarity=0.180 Sum_probs=74.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCC
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 198 (320)
||+++||+|.... .... .++|+||++||+++... ...++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~-------~~~~-~~~D~vi~~GD~~~~~~-----~~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~-- 64 (135)
T cd07379 1 RFVCISDTHSRHR-------TISI-PDGDVLIHAGDLTERGT-----LEELQKFLDWLKSLP-HPHKIVIAGNHDLTL-- 64 (135)
T ss_pred CEEEEeCCCCCCC-------cCcC-CCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhCC-CCeEEEEECCCCCcC--
Confidence 5899999997654 1122 38999999999985421 122334444454432 223578999999731
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEeccc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAP 278 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P 278 (320)
. + . ...|+++|.|
T Consensus 65 --------~----------------------------------------------------~-----~--~~~ilv~H~~ 77 (135)
T cd07379 65 --------D----------------------------------------------------P-----E--DTDILVTHGP 77 (135)
T ss_pred --------C----------------------------------------------------C-----C--CCEEEEECCC
Confidence 0 1 1 2368899999
Q ss_pred ceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 279 WYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
++............-.+.+..++++++++++++||+|..
T Consensus 78 p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~ 116 (135)
T cd07379 78 PYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEG 116 (135)
T ss_pred CCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCc
Confidence 977543211101111245667778999999999999986
No 34
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.30 E-value=9.2e-12 Score=102.22 Aligned_cols=106 Identities=17% Similarity=0.316 Sum_probs=68.4
Q ss_pred CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh---hccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCC
Q 045849 144 RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS---AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRAS 220 (320)
Q Consensus 144 ~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~ 220 (320)
.+||+||++||+++.+... ....|.+..+.+..+ ...+|++.++||||.+..... ......++|.
T Consensus 41 l~PD~Vi~lGDL~D~G~~~--~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~----~~~~~v~RF~------ 108 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIA--NDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED----PIESKIRRFE------ 108 (195)
T ss_pred cCCCEEEEeccccCCCCCC--CHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC----cCHHHHHHHH------
Confidence 3899999999999876532 222344333333333 346899999999999632110 0001111221
Q ss_pred CCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHH
Q 045849 221 GSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPW 300 (320)
Q Consensus 221 ~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l 300 (320)
. +| |++.|.|+...... .+..+
T Consensus 109 ----~-~F-------------------------------------------i~lsH~P~~~~~~~----------~~~~~ 130 (195)
T cd08166 109 ----K-YF-------------------------------------------IMLSHVPLLAEGGQ----------ALKHV 130 (195)
T ss_pred ----H-hh-------------------------------------------eeeecccccccccH----------HHHHH
Confidence 0 01 89999999875431 56778
Q ss_pred HHhCCCcEEEecCcccccc
Q 045849 301 LVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 301 ~~~~~v~lvl~GH~H~y~R 319 (320)
+.+++++++|+||.|.+.+
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~ 149 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSI 149 (195)
T ss_pred HHhcCceEEEEcCccceee
Confidence 8899999999999998753
No 35
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.27 E-value=1.7e-11 Score=105.87 Aligned_cols=178 Identities=16% Similarity=0.111 Sum_probs=91.9
Q ss_pred eEEEEEEcCCCCCCcHH---HHHH-HHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCC
Q 045849 118 YSFGLIGDLGQSYDSNV---TLTH-YERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNH 192 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~---~l~~-~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNH 192 (320)
+|++++||+|.+..... .+.+ +.....++|+|+++||+++.-..............+.++.+.. .+|+++++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 47999999998754322 2222 2222248999999999995311000011122344555666654 48999999999
Q ss_pred ccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEE
Q 045849 193 EIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLI 272 (320)
Q Consensus 193 D~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~i 272 (320)
|..... .+.+..... .-.....+.+++.+++..-... +...+..++++++.++.. +..
T Consensus 81 D~~~~~---------~~~~~~g~~------~l~~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~~------~~~ 138 (241)
T PRK05340 81 DFLLGK---------RFAKAAGMT------LLPDPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRNP------WLQ 138 (241)
T ss_pred chhhhH---------HHHHhCCCE------EeCCcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhCH------HHH
Confidence 984211 111111100 0011223566676666543211 111345555555555541 222
Q ss_pred EEecccceecCCC---------------CCCc-cHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 273 VLMHAPWYNSYNY---------------HYME-GETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 273 v~~H~P~~~~~~~---------------~~~~-~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
.++|.+++..... .... .....+.+.+++++++++++++||+|.-
T Consensus 139 ~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~ 199 (241)
T PRK05340 139 WLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRP 199 (241)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCc
Confidence 3333333321000 0000 0011246778889999999999999974
No 36
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.26 E-value=4.8e-11 Score=104.57 Aligned_cols=84 Identities=15% Similarity=0.090 Sum_probs=60.6
Q ss_pred EECCCCCCCCCCeEEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhcc
Q 045849 106 FVTPPEVGPDVPYSFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAY 182 (320)
Q Consensus 106 F~t~p~~~~~~~~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
-.++..+....+++|+.++|+|..... .+.+.++... .||+|+++||+++.. .......+.+.++++.+.
T Consensus 33 i~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~--~~DlivltGD~~~~~-----~~~~~~~~~~~L~~L~~~ 105 (284)
T COG1408 33 ILTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANE--LPDLIVLTGDYVDGD-----RPPGVAALALFLAKLKAP 105 (284)
T ss_pred eecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhc--CCCEEEEEeeeecCC-----CCCCHHHHHHHHHhhhcc
Confidence 334444444578999999999987544 2223344443 779999999999741 123456778888899999
Q ss_pred CCeEeCCCCCcccc
Q 045849 183 QPWIWTAGNHEIDF 196 (320)
Q Consensus 183 ~P~~~~~GNHD~~~ 196 (320)
.+++++.||||+..
T Consensus 106 ~gv~av~GNHd~~~ 119 (284)
T COG1408 106 LGVFAVLGNHDYGV 119 (284)
T ss_pred CCEEEEeccccccc
Confidence 99999999999963
No 37
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.21 E-value=5e-11 Score=95.73 Aligned_cols=121 Identities=20% Similarity=0.260 Sum_probs=70.8
Q ss_pred eEEEEEEcCCCCCCcH-HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcccc
Q 045849 118 YSFGLIGDLGQSYDSN-VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDF 196 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 196 (320)
+||+++||+|...... +.++.+ .++|+||++||++.. ..+.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~----~~~d~vi~~GDi~~~-----------~~~~~~~~~~----~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI----NEPDFVIILGDIFDP-----------EEVLELLRDI----PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH----TTESEEEEES-SCSH-----------HHHHHHHHHH----EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh----cCCCEEEECCCchhH-----------HHHHHHHhcC----CEEEEeCCccccc
Confidence 6999999999864332 223333 379999999999831 3444444443 8999999999631
Q ss_pred CCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEec
Q 045849 197 YPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMH 276 (320)
Q Consensus 197 ~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H 276 (320)
+...... .. +...+.. .-....|+++|
T Consensus 62 ------------~~~~~~~---------~~-----------------------------~~~~~~~---~~~~~~i~~~H 88 (156)
T PF12850_consen 62 ------------FPNENDE---------EY-----------------------------LLDALRL---TIDGFKILLSH 88 (156)
T ss_dssp ------------HHSEECT---------CS-----------------------------SHSEEEE---EETTEEEEEES
T ss_pred ------------chhhhhc---------cc-----------------------------cccceee---eecCCeEEEEC
Confidence 1111100 00 1111111 11245889999
Q ss_pred ccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 277 APWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 277 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
.+++.... ..+.+..++...+++++++||.|...
T Consensus 89 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~ 122 (156)
T PF12850_consen 89 GHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQ 122 (156)
T ss_dssp STSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEE
T ss_pred CCCccccc--------ChhhhhhhhcccCCCEEEcCCcccce
Confidence 87766331 12345577779999999999999865
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.19 E-value=2.6e-10 Score=96.80 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=42.7
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDF 196 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 196 (320)
+||+++||+|..... .....+ +. .+||+||++||++.. . ..+.+.+..+ ..|+++++||||..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l-~~-~~pD~Vl~~GDi~~~--------~--~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKAL-HL-LQPDLVLFVGDFGNE--------S--VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHH-hc-cCCCEEEECCCCCcC--------h--HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 589999999976432 222333 33 389999999999832 1 1233333332 468999999999864
No 39
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.19 E-value=2.2e-10 Score=98.21 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=76.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHH---hCCCCCceEEEcccccccCCCCCC--------------CChhhhh----H-----
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCH--------------DNNRWDT----W----- 172 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~--------------~~~~~~~----~----- 172 (320)
||++.+|.+...........+. .. .+||++|++||.+|++..... .....+. +
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~-~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~ 79 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSE-EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRS 79 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccc-cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcC
Confidence 5788888876655444444443 23 399999999999999863210 0011111 1
Q ss_pred HHHHhhhhccCCeEeCCCCCccccCCCCCC-------c------ccCcccceeeeCCCCCCC--CCCCcEEEEEeCcE-E
Q 045849 173 GRFVERSAAYQPWIWTAGNHEIDFYPEIGE-------T------VPFKPYSHRYHVPYRASG--STAPFWYSIKRASV-Y 236 (320)
Q Consensus 173 ~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~-------~------~~~~~~~~~f~~p~~~~~--~~~~~~ys~~~g~v-~ 236 (320)
...++.+.+.+|++.++++||+..+..... . .....|......+..... .....|+++.+|.. .
T Consensus 80 ~p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~ 159 (228)
T cd07389 80 DPDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVD 159 (228)
T ss_pred CHHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcce
Confidence 123455678899999999999974432210 0 011234433333322222 34678999999996 9
Q ss_pred EEEEcccC
Q 045849 237 IIVLSSYS 244 (320)
Q Consensus 237 fi~lds~~ 244 (320)
|++||+..
T Consensus 160 ~~~lD~R~ 167 (228)
T cd07389 160 LILLDTRT 167 (228)
T ss_pred EEEEeccc
Confidence 99999854
No 40
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.17 E-value=1.4e-10 Score=95.60 Aligned_cols=176 Identities=16% Similarity=0.140 Sum_probs=103.8
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccCCeEeCCCCCcc
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQPWIWTAGNHEI 194 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~~GNHD~ 194 (320)
..+|+++++|.|........+....+.. ++|+++++||++|-.-. +...-.+-.. ++.+. ..+|+++++||-|-
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~-~~D~lviaGDlt~~~~~---~~~~~~~~~~-~e~l~~~~~~v~avpGNcD~ 76 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADI-RADLLVIAGDLTYFHFG---PKEVAEELNK-LEALKELGIPVLAVPGNCDP 76 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhc-cCCEEEEecceehhhcC---chHHHHhhhH-HHHHHhcCCeEEEEcCCCCh
Confidence 3689999999998876555555555553 89999999999943211 1111111100 34443 67899999999876
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC--C----CCChH-HHHHHHHhcccCCCCC
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA--Y----GKYTP-QYKWLEEELPKVNRSE 267 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~--~----~~~~~-q~~WL~~~L~~~~~~~ 267 (320)
..-. . ........ -.. -+..++++.|+.+--... + ...++ -+.-|++.++..+ +
T Consensus 77 ~~v~--------~-~l~~~~~~-----v~~---~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~--~ 137 (226)
T COG2129 77 PEVI--------D-VLKNAGVN-----VHG---RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD--N 137 (226)
T ss_pred HHHH--------H-HHHhcccc-----ccc---ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc--C
Confidence 3110 0 00001000 001 346677777777432111 1 11122 2344555555532 1
Q ss_pred CCEEEEEecccceecCCCCCCcc--HHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 268 TPWLIVLMHAPWYNSYNYHYMEG--ETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 268 ~~~~iv~~H~P~~~~~~~~~~~~--~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
. -+|+++|.|||.....- ..+ ..-.+.+..++++.++.+.+|||.|-+
T Consensus 138 ~-~~Il~~HaPP~gt~~d~-~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs 187 (226)
T COG2129 138 P-VNILLTHAPPYGTLLDT-PSGYVHVGSKAVRKLIEEFQPLLGLHGHIHES 187 (226)
T ss_pred c-ceEEEecCCCCCccccC-CCCccccchHHHHHHHHHhCCceEEEeeeccc
Confidence 1 13999999999876542 222 223578889999999999999999964
No 41
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.16 E-value=1.6e-10 Score=89.77 Aligned_cols=47 Identities=17% Similarity=0.155 Sum_probs=32.1
Q ss_pred EEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 271 LIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+|+++|+|++....... ....-.+.+..++.+++++++|+||+|...
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~ 104 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNY 104 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCc
Confidence 58889998875432110 011224577788889999999999999653
No 42
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=99.15 E-value=4.3e-10 Score=104.58 Aligned_cols=176 Identities=16% Similarity=0.241 Sum_probs=102.4
Q ss_pred HHHHHHhCCCCCceEEEcccccccCCCCCCCChhh---hhHHHHHhhhhccCCeEeCCCCCccccCCCCCC----cc---
Q 045849 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRW---DTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGE----TV--- 204 (320)
Q Consensus 135 ~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~----~~--- 204 (320)
+|+++.++..++|||+++||++-.+.+....+... ....+.+.+....+|+|++.||||......+.. ..
T Consensus 200 ~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~~ 279 (577)
T KOG3770|consen 200 ALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHSQ 279 (577)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhhh
Confidence 45566666445999999999996654432222222 223445556677999999999999853221110 00
Q ss_pred --cCcccceeee--CCCCC-CCCCCCcEEEE-EeCcEEEEEEcccCCC----------CCChHHHHHHHHhcccCCCCCC
Q 045849 205 --PFKPYSHRYH--VPYRA-SGSTAPFWYSI-KRASVYIIVLSSYSAY----------GKYTPQYKWLEEELPKVNRSET 268 (320)
Q Consensus 205 --~~~~~~~~f~--~p~~~-~~~~~~~~ys~-~~g~v~fi~lds~~~~----------~~~~~q~~WL~~~L~~~~~~~~ 268 (320)
.|.++...|. +|... .....+.+|.. -+++.++|+||+...+ ....+|++|+..+|.+++..+
T Consensus 280 ~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~G- 358 (577)
T KOG3770|consen 280 LWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAG- 358 (577)
T ss_pred hHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcC-
Confidence 0011111111 22211 12233455654 4588999999995321 234788999999998876444
Q ss_pred CEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCC--CcEEEecCccc
Q 045849 269 PWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYK--VDVVFAGHVHA 316 (320)
Q Consensus 269 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--v~lvl~GH~H~ 316 (320)
.-+-++.|.|+-...-. +.-...+..++.++. |...|.||.|.
T Consensus 359 ekVhil~HIPpG~~~c~-----~~ws~~f~~iv~r~~~tI~gqf~GH~h~ 403 (577)
T KOG3770|consen 359 EKVHILGHIPPGDGVCL-----EGWSINFYRIVNRFRSTIAGQFYGHTHI 403 (577)
T ss_pred CEEEEEEeeCCCCcchh-----hhhhHHHHHHHHHHHHhhhhhccccCcc
Confidence 44888999998542211 111234445555552 55679999996
No 43
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=99.15 E-value=3e-10 Score=89.56 Aligned_cols=157 Identities=17% Similarity=0.134 Sum_probs=83.1
Q ss_pred HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceee
Q 045849 134 VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRY 213 (320)
Q Consensus 134 ~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f 213 (320)
++-++.......-|.|++.||+..+...... ..=++++..+. .+ -+.+.||||+.+. ..... ...+....
T Consensus 32 kI~k~W~~~v~~eDiVllpGDiSWaM~l~ea-----~~Dl~~i~~LP-G~-K~m~rGNHDYWw~-s~skl--~n~lp~~l 101 (230)
T COG1768 32 KIKKHWRSKVSPEDIVLLPGDISWAMRLEEA-----EEDLRFIGDLP-GT-KYMIRGNHDYWWS-SISKL--NNALPPIL 101 (230)
T ss_pred HHHHHHHhcCChhhEEEecccchhheechhh-----hhhhhhhhcCC-Cc-EEEEecCCccccc-hHHHH--HhhcCchH
Confidence 3334444443345899999999987553211 11234444432 22 4679999999653 11100 00111100
Q ss_pred eCCCCCCCCCCCcEEEEEeCcEEEEEE---ccc-CCCCCChHH--------HHHHHH-hcccCCCCCCCEEEEEecccce
Q 045849 214 HVPYRASGSTAPFWYSIKRASVYIIVL---SSY-SAYGKYTPQ--------YKWLEE-ELPKVNRSETPWLIVLMHAPWY 280 (320)
Q Consensus 214 ~~p~~~~~~~~~~~ys~~~g~v~fi~l---ds~-~~~~~~~~q--------~~WL~~-~L~~~~~~~~~~~iv~~H~P~~ 280 (320)
.+- +. .|.+++..+++. |+. .++....+| +.-|+. ..++. ++...-.||++|.|++
T Consensus 102 ~~~--------n~--~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l-~k~~~~fivM~HYPP~ 170 (230)
T COG1768 102 FYL--------NN--GFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAAL-PKGVSKFIVMTHYPPF 170 (230)
T ss_pred hhh--------cc--ceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhc-ccCcCeEEEEEecCCC
Confidence 000 00 134444433332 221 112222222 333443 22222 3445568999999999
Q ss_pred ecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 281 NSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
+..... ..+..++++++|+.++.||.|--.|
T Consensus 171 s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~ 201 (230)
T COG1768 171 SDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPR 201 (230)
T ss_pred CCCCCC--------cchHHHHhhcceeeEEeeeccCCCC
Confidence 866532 1567788899999999999998765
No 44
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=99.14 E-value=1e-10 Score=95.35 Aligned_cols=59 Identities=22% Similarity=0.450 Sum_probs=38.0
Q ss_pred HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-------ccCCeEeCCCCCcccc
Q 045849 135 TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-------AYQPWIWTAGNHEIDF 196 (320)
Q Consensus 135 ~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~P~~~~~GNHD~~~ 196 (320)
.+..+.+. .+||+||++||+++.... .....|....+.++.+. ..+|++.++||||...
T Consensus 36 ~~~~~i~~-~~pd~vi~lGDl~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 36 AFKTALQR-LKPDVVLFLGDLFDGGRI--ADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHHHHHh-cCCCEEEEeccccCCcEe--CCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34445555 499999999999975331 11234554444443332 2689999999999963
No 45
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.11 E-value=3.6e-10 Score=93.00 Aligned_cols=177 Identities=15% Similarity=0.167 Sum_probs=86.5
Q ss_pred CeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhh--------------------------
Q 045849 117 PYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWD-------------------------- 170 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~-------------------------- 170 (320)
+-+++.++|.+........+...+... +||.|+++||++-... ....|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~-~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEK-GPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHH-T-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhcccc-CCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 448999999986654444444444443 9999999999984321 123343
Q ss_pred hHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCC-C--
Q 045849 171 TWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAY-G-- 247 (320)
Q Consensus 171 ~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-~-- 247 (320)
.|++.+.. ..+|++++|||||........ ..|......|.- -.-...+.+.-|...|+++..+-.- .
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~~~~lr-----~a~~~e~v~p~~---~~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPERFFLR-----EAYNAEIVTPHI---HNVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SHHHHHH-----HHHHCCCC-TTE---EE-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHh--cCCcEEEecCCCCchHHHHHH-----HHhccceeccce---eeeeeeecccCCcEEEEecCccccCCCcc
Confidence 33333333 578999999999983100000 001111111110 0011223344455777776542110 0
Q ss_pred ------CChHHHHHHHHhcccCCCCCCCEEEEEecccc-eecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 248 ------KYTPQYKWLEEELPKVNRSETPWLIVLMHAPW-YNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 248 ------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
......+|..+.|.+++ +. -+|+++|.|| +..+..+ .-.+.+..++++++.++|||||.|-
T Consensus 150 ~~~~LrYP~weaey~lk~l~elk--~~-r~IlLfhtpPd~~kg~~h-----~GS~~V~dlIk~~~P~ivl~Ghihe 217 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLRELK--DY-RKILLFHTPPDLHKGLIH-----VGSAAVRDLIKTYNPDIVLCGHIHE 217 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGCT--SS-EEEEEESS-BTBCTCTBT-----TSBHHHHHHHHHH--SEEEE-SSS-
T ss_pred ccccccchHHHHHHHHHHHHhcc--cc-cEEEEEecCCccCCCccc-----ccHHHHHHHHHhcCCcEEEeccccc
Confidence 01234566677888752 33 4788899999 4433222 2235778899999999999999985
No 46
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=99.07 E-value=4e-10 Score=90.48 Aligned_cols=55 Identities=16% Similarity=0.300 Sum_probs=35.6
Q ss_pred HHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh---ccCCeEeCCCCCccc
Q 045849 138 HYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA---AYQPWIWTAGNHEID 195 (320)
Q Consensus 138 ~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~P~~~~~GNHD~~ 195 (320)
++++. .+||+||++||++..... .....|..+...+..+. ...|++.++||||..
T Consensus 32 ~~i~~-~~pd~vv~~GDl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 32 TSLWL-LQPDVVFVLGDLFDEGKW--STDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHh-cCCCEEEECCCCCCCCcc--CCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34444 399999999999965332 12234544433333332 258999999999985
No 47
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.04 E-value=3.2e-09 Score=85.64 Aligned_cols=63 Identities=14% Similarity=0.023 Sum_probs=42.8
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+|++++||+|......+.+.++.+...++|.|+++||++. ....+.++.+ ..|++++.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~------------~~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS------------PFVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC------------HHHHHHHHHh--CCceEEEccCCCc
Confidence 5899999999765444444444444237999999999981 1122333332 3589999999997
No 48
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.98 E-value=1.8e-09 Score=86.79 Aligned_cols=59 Identities=22% Similarity=0.226 Sum_probs=41.1
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|... ..++++.+...++|.|+++||+++.... . . +....|++.+.||||..
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----~---~-------~~~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGPL-----N---E-------LELKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCcccccccc-----c---h-------hhcCCcEEEEeCCCCCc
Confidence 589999999764 3444444443349999999999864321 1 0 23457899999999984
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.98 E-value=8.1e-09 Score=88.61 Aligned_cols=75 Identities=20% Similarity=0.173 Sum_probs=46.4
Q ss_pred EEEEcCCCCCCcH----HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCCccc
Q 045849 121 GLIGDLGQSYDSN----VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNHEID 195 (320)
Q Consensus 121 ~~~gD~~~~~~~~----~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~~ 195 (320)
+++||+|.+.... ..++.+.+...+||+|+++||+++.-............+.+.++.+.. .+|+++++||||+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 6899999875322 233444443237999999999996310000011122344555666654 58999999999984
No 50
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.96 E-value=2.5e-09 Score=87.74 Aligned_cols=59 Identities=22% Similarity=0.381 Sum_probs=36.8
Q ss_pred HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhH-HHHHhhhh-------------------ccCCeEeCCCCCc
Q 045849 134 VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTW-GRFVERSA-------------------AYQPWIWTAGNHE 193 (320)
Q Consensus 134 ~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------------~~~P~~~~~GNHD 193 (320)
...+.+... .+||.|+++||+... ++. .+..|... .++.+-+. ..+|++.++||||
T Consensus 34 ~~~~~~~~~-l~Pd~V~fLGDLfd~-~w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHD 109 (193)
T cd08164 34 HIVSMMQFW-LKPDAVVVLGDLFSS-QWI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHD 109 (193)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCC-Ccc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCccc
Confidence 344455555 499999999999965 443 22344332 22222221 1489999999999
Q ss_pred ccc
Q 045849 194 IDF 196 (320)
Q Consensus 194 ~~~ 196 (320)
...
T Consensus 110 IG~ 112 (193)
T cd08164 110 VGY 112 (193)
T ss_pred CCC
Confidence 974
No 51
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.88 E-value=1e-08 Score=89.22 Aligned_cols=173 Identities=15% Similarity=0.095 Sum_probs=87.1
Q ss_pred eEEEEEEcCCCCC------CcHHH----HHHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeE
Q 045849 118 YSFGLIGDLGQSY------DSNVT----LTHYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWI 186 (320)
Q Consensus 118 ~~f~~~gD~~~~~------~~~~~----l~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (320)
++|+.++|+|... ..... ++++.+. .|| +++.+||++...... +........+.++.+ -.-+
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~--~~~~l~v~~GD~~~~~~~~--~~~~~~~~~~~l~~~---g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE--NENTLLLDAGDNFDGSPPS--TATKGEANIELMNAL---GYDA 73 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc--CCCeEEEeCCccCCCccch--hccCCcHHHHHHHhc---CCCE
Confidence 5899999999553 22333 3444443 577 789999999654321 111122233333332 2456
Q ss_pred eCCCCCccccCCCCCCcccCcccceeeeCC-------CCC---CCCCCCcEEEEEeCcE--EEEEEcccCCC-------C
Q 045849 187 WTAGNHEIDFYPEIGETVPFKPYSHRYHVP-------YRA---SGSTAPFWYSIKRASV--YIIVLSSYSAY-------G 247 (320)
Q Consensus 187 ~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p-------~~~---~~~~~~~~ys~~~g~v--~fi~lds~~~~-------~ 247 (320)
.++||||+...... +.........| ..+ .......|..++.+++ .|+++.+.... .
T Consensus 74 ~~~GNHe~d~g~~~-----l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~ 148 (252)
T cd00845 74 VTIGNHEFDYGLDA-----LAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWI 148 (252)
T ss_pred EeeccccccccHHH-----HHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcc
Confidence 78899998643210 01111111111 000 0111233556677774 45555542110 0
Q ss_pred ---CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCccccc
Q 045849 248 ---KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAYE 318 (320)
Q Consensus 248 ---~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 318 (320)
......+-+++..+. .+.+.+.+|++.|-|.... . .+.++ .+||+||+||.|...
T Consensus 149 ~~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~~------------~---~la~~~~giDlvlggH~H~~~ 207 (252)
T cd00845 149 IGLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDDD------------E---ELAEEVPGIDVILGGHTHHLL 207 (252)
T ss_pred cCceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccch------------H---HHHhcCCCccEEEcCCcCccc
Confidence 011223334332222 1246788999999766431 1 12222 589999999999864
No 52
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.83 E-value=3.7e-08 Score=90.55 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=31.2
Q ss_pred CCeEEEEEEcCCCCCCc---------HHHHHHHHhC--CCCCceEEEcccccccCC
Q 045849 116 VPYSFGLIGDLGQSYDS---------NVTLTHYERN--PRKGQTLLFVGDLSYADN 160 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~---------~~~l~~~~~~--~~~~d~vl~~GD~~~~~~ 160 (320)
..+||++++|+|.+... ..+++++++. ..++|+||++||+.+...
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCC
Confidence 46899999999987321 2334433321 148999999999997644
No 53
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.80 E-value=9.6e-08 Score=82.95 Aligned_cols=182 Identities=19% Similarity=0.170 Sum_probs=95.7
Q ss_pred EEEEEcCCCCCCcH-HHHHHHHhC-CCCCceEEEcccccccCCCCCC-------CChhhhhHHHHHhhh-hccCCeEeCC
Q 045849 120 FGLIGDLGQSYDSN-VTLTHYERN-PRKGQTLLFVGDLSYADNYPCH-------DNNRWDTWGRFVERS-AAYQPWIWTA 189 (320)
Q Consensus 120 f~~~gD~~~~~~~~-~~l~~~~~~-~~~~d~vl~~GD~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~P~~~~~ 189 (320)
|++.||+|...... ..+..+.+. ..++|+||++||+......... +...+..|.+.++.. ...+|++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 57899999753221 223333322 2379999999999632211000 001234444444433 2567889999
Q ss_pred CCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcE-----EEEEeCcEEEEEEcccCC---CC--------CChHHH
Q 045849 190 GNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFW-----YSIKRASVYIIVLSSYSA---YG--------KYTPQY 253 (320)
Q Consensus 190 GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~-----ys~~~g~v~fi~lds~~~---~~--------~~~~q~ 253 (320)
||||.... +.+ ++..+ ....+.+ ..+++++++|..|..... +. ..+.++
T Consensus 81 GNHE~~~~-----------l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 81 GNHEASNY-----------LWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred CCCCCHHH-----------HHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 99996310 100 01000 0011222 235578899998875211 11 112333
Q ss_pred HHHH-------HhcccCCCCCCCEEEEEecccceecCCCCCCc---------------cHHHHHHHHHHHHhCCCcEEEe
Q 045849 254 KWLE-------EELPKVNRSETPWLIVLMHAPWYNSYNYHYME---------------GETMRVMYEPWLVKYKVDVVFA 311 (320)
Q Consensus 254 ~WL~-------~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~l~~~~~v~lvl~ 311 (320)
..+. ..|.... ... -|+++|.||..-....... +..-...+..++++.+...+|+
T Consensus 146 rs~y~~r~~~~~kl~~~~-~~v--DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~ 222 (262)
T cd00844 146 RSAYHVRNIEVFKLKQLK-QPI--DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFS 222 (262)
T ss_pred HHhhhhhHHHHHHHHhcC-CCC--cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEE
Confidence 2211 1122211 123 5999999998754321100 0112346778999999999999
Q ss_pred cCccc-ccc
Q 045849 312 GHVHA-YER 319 (320)
Q Consensus 312 GH~H~-y~R 319 (320)
||.|. |+|
T Consensus 223 gH~H~~f~~ 231 (262)
T cd00844 223 AHLHVKFAA 231 (262)
T ss_pred ecCCcccce
Confidence 99998 553
No 54
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.78 E-value=9.2e-08 Score=83.41 Aligned_cols=178 Identities=16% Similarity=0.182 Sum_probs=87.3
Q ss_pred eEEEEEEcCCCCC-------CcHHH----HHHHHhCCCCCc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCe
Q 045849 118 YSFGLIGDLGQSY-------DSNVT----LTHYERNPRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPW 185 (320)
Q Consensus 118 ~~f~~~gD~~~~~-------~~~~~----l~~~~~~~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (320)
++|+.++|.|.-. ..... ++++.++ +++ ++|.+||++...... ...+.+...+.++.+. .-
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~--~~~~l~l~~GD~~~g~~~~--~~~~g~~~~~~l~~l~---~d 73 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE--NPNTLVLFSGDVLSPSLLS--TATKGKQMVPVLNALG---VD 73 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc--CCCEEEEECCCccCCccch--hhcCCccHHHHHHhcC---Cc
Confidence 4788888887311 11223 3333333 567 999999998543211 1111223344444332 23
Q ss_pred EeCCCCCccccCCCC-CC---cccCcccce-eeeCCCC-CCCCCCCcEEEEEeCcE--EEEEEcccCCC------C---C
Q 045849 186 IWTAGNHEIDFYPEI-GE---TVPFKPYSH-RYHVPYR-ASGSTAPFWYSIKRASV--YIIVLSSYSAY------G---K 248 (320)
Q Consensus 186 ~~~~GNHD~~~~~~~-~~---~~~~~~~~~-~f~~p~~-~~~~~~~~~ys~~~g~v--~fi~lds~~~~------~---~ 248 (320)
+.++||||+...... .. ...+ .+.. ....... .....-..|..++.+++ -|+++.+.... . .
T Consensus 74 ~~~~GNHefd~g~~~l~~~~~~~~~-~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~ 152 (257)
T cd07406 74 LACFGNHEFDFGEDQLQKRLGESKF-PWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVR 152 (257)
T ss_pred EEeecccccccCHHHHHHHHhhCCC-CEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcce
Confidence 668999999643110 00 0000 0110 0001110 00011245777888885 45666543211 0 0
Q ss_pred ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCccccc
Q 045849 249 YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAYE 318 (320)
Q Consensus 249 ~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 318 (320)
..+-.+.+++.+++.++.+++.+|++.|.+.... ..+.++ .+||++|+||.|...
T Consensus 153 ~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~d---------------~~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 153 YRDYVETARELVDELREQGADLIIALTHMRLPND---------------KRLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred EcCHHHHHHHHHHHHHhCCCCEEEEEeccCchhh---------------HHHHHhCCCCceEEecccceeE
Confidence 1222333333332222256788999999865210 123333 489999999999753
No 55
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.72 E-value=3.2e-07 Score=80.99 Aligned_cols=183 Identities=15% Similarity=0.079 Sum_probs=89.9
Q ss_pred eEEEEEEcCCCCC-------------CcHHH----HHHHHhCCCCCceEEE-cccccccCCCCCCC----ChhhhhHHHH
Q 045849 118 YSFGLIGDLGQSY-------------DSNVT----LTHYERNPRKGQTLLF-VGDLSYADNYPCHD----NNRWDTWGRF 175 (320)
Q Consensus 118 ~~f~~~gD~~~~~-------------~~~~~----l~~~~~~~~~~d~vl~-~GD~~~~~~~~~~~----~~~~~~~~~~ 175 (320)
++|+.++|+|... ..... ++++.+. +|+.+++ +||++......... ........+.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~--~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ 78 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE--NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAA 78 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc--CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHH
Confidence 4788999998642 11122 3333333 6777776 99999643211000 0011223344
Q ss_pred HhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCC---------CCCCCCCCCcEEEEEeC-cEE--EEEEccc
Q 045849 176 VERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVP---------YRASGSTAPFWYSIKRA-SVY--IIVLSSY 243 (320)
Q Consensus 176 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p---------~~~~~~~~~~~ys~~~g-~v~--fi~lds~ 243 (320)
++.+ .. -+.++||||+.+.... +....+....| ..+ ......|..++.+ +++ |+++-+.
T Consensus 79 ln~~--g~-d~~~lGNHe~d~g~~~-----l~~~~~~~~~~~l~aNv~~~~~~-~~~~~~~~i~~~~~g~kVgviG~~~~ 149 (277)
T cd07410 79 MNAL--GY-DAGTLGNHEFNYGLDY-----LDKVIKQANFPVLSANVIDADTG-EPFLKPYVILERDVGVKVGIIGLTTP 149 (277)
T ss_pred HHhc--CC-CEEeecccCcccCHHH-----HHHHHHhCCCCEEEEEEEeCCCC-CcccCCEEEEEecCCCEEEEEecCCc
Confidence 4443 23 3667899998643110 01111111111 000 1122346677888 755 4554332
Q ss_pred CC--C-----------CCChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEE
Q 045849 244 SA--Y-----------GKYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVV 309 (320)
Q Consensus 244 ~~--~-----------~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lv 309 (320)
.. + ....+..++..+.|++ .+++.+|+++|.+........ ...+.....|.++ -+||++
T Consensus 150 ~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~----~~~~~~~~~la~~~~~vD~I 222 (277)
T cd07410 150 QIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES----LTGENAAYELAEEVPGIDAI 222 (277)
T ss_pred ccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc----cCCccHHHHHHhcCCCCcEE
Confidence 10 0 0111234444445544 467889999998775432100 0111122344445 489999
Q ss_pred EecCccccc
Q 045849 310 FAGHVHAYE 318 (320)
Q Consensus 310 l~GH~H~y~ 318 (320)
|+||.|...
T Consensus 223 lgGHsH~~~ 231 (277)
T cd07410 223 LTGHQHRRF 231 (277)
T ss_pred EeCCCcccc
Confidence 999999753
No 56
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.69 E-value=5.1e-07 Score=74.13 Aligned_cols=62 Identities=16% Similarity=0.139 Sum_probs=40.6
Q ss_pred EEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+|+++||+|.+... ...+.++.+. .++|.|+++||++.. .. ...++.+ ..|++.|.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~-~~~d~iih~GDi~~~--------~~----~~~l~~~--~~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP-GKIQHVLCTGNLCSK--------ET----YDYLKTI--APDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc-CCCCEEEECCCCCCH--------HH----HHHHHhh--CCceEEEECCCCcc
Confidence 47899999954432 2234455554 379999999999831 12 2233332 23799999999973
No 57
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.66 E-value=7.2e-08 Score=89.34 Aligned_cols=73 Identities=21% Similarity=0.152 Sum_probs=50.7
Q ss_pred eEEEEEEcCCCCC-C--c-------HHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-cc
Q 045849 118 YSFGLIGDLGQSY-D--S-------NVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AY 182 (320)
Q Consensus 118 ~~f~~~gD~~~~~-~--~-------~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 182 (320)
+||++++|+|.+. . . ..+ +..+++. ++||||++||+.+....+ ...-..+.+.++.+. .+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~--~vD~vliAGDlFd~~~Ps---~~a~~~~~~~l~~l~~~~ 75 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE--KVDFVLIAGDLFDTNNPS---PRALKLFLEALRRLKDAG 75 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc--cCCEEEEccccccCCCCC---HHHHHHHHHHHHHhccCC
Confidence 5899999999982 1 1 122 3333344 899999999999764422 223345566666654 58
Q ss_pred CCeEeCCCCCccc
Q 045849 183 QPWIWTAGNHEID 195 (320)
Q Consensus 183 ~P~~~~~GNHD~~ 195 (320)
+|++++.||||..
T Consensus 76 Ipv~~I~GNHD~~ 88 (390)
T COG0420 76 IPVVVIAGNHDSP 88 (390)
T ss_pred CcEEEecCCCCch
Confidence 9999999999985
No 58
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.66 E-value=4.3e-08 Score=83.23 Aligned_cols=75 Identities=13% Similarity=0.033 Sum_probs=44.0
Q ss_pred EEEEcCCCCCCcH---HHHHHHHhCC--CCCceEEEcccccccCCCCCCC-Chhhhh-HHHHHhhhhccCCeEeCCCCCc
Q 045849 121 GLIGDLGQSYDSN---VTLTHYERNP--RKGQTLLFVGDLSYADNYPCHD-NNRWDT-WGRFVERSAAYQPWIWTAGNHE 193 (320)
Q Consensus 121 ~~~gD~~~~~~~~---~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~P~~~~~GNHD 193 (320)
+++||+|.+.... ..+..+.... .++|.++++||+++.-...... ...... +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4789999875432 2222222221 3899999999999532111000 011111 2344445567889999999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 81 ~~ 82 (217)
T cd07398 81 FL 82 (217)
T ss_pred HH
Confidence 85
No 59
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.55 E-value=4.2e-07 Score=80.31 Aligned_cols=148 Identities=20% Similarity=0.174 Sum_probs=73.9
Q ss_pred CCc-eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCC-----
Q 045849 145 KGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYR----- 218 (320)
Q Consensus 145 ~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~----- 218 (320)
.++ ++|.+||++...... .........+.++.+ ... +.++||||+++.... +..+.....+|.-
T Consensus 48 ~~~~l~ld~GD~~~gs~~~--~~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~~-----l~~~~~~~~~p~l~aNv~ 117 (281)
T cd07409 48 NPNVLFLNAGDAFQGTLWY--TLYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVEG-----LAPFLNNLKFPVLSANID 117 (281)
T ss_pred CCCEEEEeCCCCCCCcchh--hhcCChHHHHHHHhc--CCC-EEEeccccccCCHHH-----HHHHHHhCCCCEEEEeee
Confidence 555 566699998653321 111122333444432 333 457899999753210 0111111111110
Q ss_pred ---C---CCCCCCcEEEEEeCcE--EEEEEcccCCC------C--CChHHHHHHHHhcccCCCCCCCEEEEEecccceec
Q 045849 219 ---A---SGSTAPFWYSIKRASV--YIIVLSSYSAY------G--KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNS 282 (320)
Q Consensus 219 ---~---~~~~~~~~ys~~~g~v--~fi~lds~~~~------~--~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 282 (320)
+ .......|..++.+++ -|+++-+.... . ...+..+.+++.+++.+..+++.+|++.|.....
T Consensus 118 ~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~- 196 (281)
T cd07409 118 TSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV- 196 (281)
T ss_pred cCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh-
Confidence 0 0011233566778875 45555442210 0 0123345566655554334678899999975421
Q ss_pred CCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 283 YNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 283 ~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
. ..+.++ -+||+|++||.|..
T Consensus 197 -----------d---~~la~~~~giD~IiggH~H~~ 218 (281)
T cd07409 197 -----------D---KEIARKVPGVDVIVGGHSHTF 218 (281)
T ss_pred -----------H---HHHHHcCCCCcEEEeCCcCcc
Confidence 0 123333 48999999999985
No 60
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.55 E-value=6.9e-07 Score=77.95 Aligned_cols=182 Identities=15% Similarity=0.160 Sum_probs=86.9
Q ss_pred eEEEEEEcCCCCCC-------cHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeC
Q 045849 118 YSFGLIGDLGQSYD-------SNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWT 188 (320)
Q Consensus 118 ~~f~~~gD~~~~~~-------~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (320)
++|+.++|+|.... ....+..+++.. .+++++|.+||++...... .........+.+.. ...-+ .+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~ln~--~g~d~-~~ 75 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPIS--DLDKGETIIKIMNA--VGYDA-VT 75 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhh--hhcCCcHHHHHHHh--cCCcE-Ec
Confidence 47899999996421 123333322221 1578999999998543211 11111223333433 23343 57
Q ss_pred CCCCccccCCCCCCcccCcccceeeeCCCC-------C-CCCCCCcEEEEEeC-c--EEEEEEcccCC-C----C--C--
Q 045849 189 AGNHEIDFYPEIGETVPFKPYSHRYHVPYR-------A-SGSTAPFWYSIKRA-S--VYIIVLSSYSA-Y----G--K-- 248 (320)
Q Consensus 189 ~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~-------~-~~~~~~~~ys~~~g-~--v~fi~lds~~~-~----~--~-- 248 (320)
+||||+++... .+....+...+|.- . ....-..|..++.+ + +-|+++-+... . . .
T Consensus 76 ~GNHefd~G~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~ 150 (257)
T cd07408 76 PGNHEFDYGLD-----RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDV 150 (257)
T ss_pred cccccccCCHH-----HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCc
Confidence 89999964311 01111111111110 0 00011235555676 5 56666655311 0 0 0
Q ss_pred -ChHHHHHHHHh-cccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCccccc
Q 045849 249 -YTPQYKWLEEE-LPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAYE 318 (320)
Q Consensus 249 -~~~q~~WL~~~-L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y~ 318 (320)
..+-.+-+++. ....++.+++.+|++.|.+....... . . . ..+.++ .+||++|.||.|...
T Consensus 151 ~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~-~----~---~~la~~~~giDvIigGH~H~~~ 214 (257)
T cd07408 151 TFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W-T----S---TELAANVTGIDLIIDGHSHTTI 214 (257)
T ss_pred EEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c-c----H---HHHHHhCCCceEEEeCCCcccc
Confidence 01122223332 11111246788999999877543210 0 0 1 122223 489999999999864
No 61
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.53 E-value=2e-06 Score=76.34 Aligned_cols=90 Identities=19% Similarity=0.167 Sum_probs=46.4
Q ss_pred cEEEEEeCcE--EEEEEcccCC-C--------C-CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHH
Q 045849 226 FWYSIKRASV--YIIVLSSYSA-Y--------G-KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETM 293 (320)
Q Consensus 226 ~~ys~~~g~v--~fi~lds~~~-~--------~-~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~ 293 (320)
.|..++.+++ -||++-+... . + ....-.+-+++.+++.+..+.+.+|++.|........... ....
T Consensus 138 py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~ 215 (288)
T cd07412 138 PYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAA 215 (288)
T ss_pred CEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--cccc
Confidence 4556778875 4556533210 0 0 0122233344444333224678899999987653222110 0011
Q ss_pred HHHHHHHHHh--CCCcEEEecCcccc
Q 045849 294 RVMYEPWLVK--YKVDVVFAGHVHAY 317 (320)
Q Consensus 294 ~~~l~~l~~~--~~v~lvl~GH~H~y 317 (320)
......++.+ -+||++|+||+|..
T Consensus 216 ~~~~~~l~~~~~~~iD~IlgGHsH~~ 241 (288)
T cd07412 216 SGPIADIVNRLDPDVDVVFAGHTHQA 241 (288)
T ss_pred ChhHHHHHhhcCCCCCEEEeCccCcc
Confidence 1122334444 37999999999975
No 62
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.51 E-value=8.9e-06 Score=71.70 Aligned_cols=189 Identities=13% Similarity=0.092 Sum_probs=91.8
Q ss_pred CCCeEEEEEEcCCCCCC----------c----HHHHHHHHhC--CCCCc-eEEEcccccccCCCCCCCChhhhhHHHHHh
Q 045849 115 DVPYSFGLIGDLGQSYD----------S----NVTLTHYERN--PRKGQ-TLLFVGDLSYADNYPCHDNNRWDTWGRFVE 177 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~----------~----~~~l~~~~~~--~~~~d-~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~ 177 (320)
-..++|+..+|+|.... . .+.++++.+. ...++ ++|.+||..............+....+.++
T Consensus 3 ~~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN 82 (282)
T cd07407 3 WGDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFR 82 (282)
T ss_pred cceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHH
Confidence 35789999999996421 0 1112222221 12454 677899999754332111113344445554
Q ss_pred hhhccCCeEeCCCCCccccCCCC-CC------cccCcccceeeeCCCC--CCCCCCCcEEEEEeC-cE--EEEEEcccCC
Q 045849 178 RSAAYQPWIWTAGNHEIDFYPEI-GE------TVPFKPYSHRYHVPYR--ASGSTAPFWYSIKRA-SV--YIIVLSSYSA 245 (320)
Q Consensus 178 ~~~~~~P~~~~~GNHD~~~~~~~-~~------~~~~~~~~~~f~~p~~--~~~~~~~~~ys~~~g-~v--~fi~lds~~~ 245 (320)
.+. . =+.++||||++..... .. ...+.-.......... ........|..+..+ ++ -||++-+...
T Consensus 83 ~mg--y-Da~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~ 159 (282)
T cd07407 83 MMP--Y-DLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFK 159 (282)
T ss_pred hcC--C-cEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecccc
Confidence 432 1 2468999999632210 00 0001000000000000 000112335666765 64 4666644221
Q ss_pred C-------CCC--hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCc-EEEecCc
Q 045849 246 Y-------GKY--TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVD-VVFAGHV 314 (320)
Q Consensus 246 ~-------~~~--~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~-lvl~GH~ 314 (320)
. ... ..+..|+.+.|++ .+++.+|+++|....... ...+....+.++. ++| ++|.||+
T Consensus 160 ~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~GHs 228 (282)
T cd07407 160 GAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGGHS 228 (282)
T ss_pred cCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeCCc
Confidence 0 011 1223488777874 467889999998764321 1111122344444 577 7999999
Q ss_pred ccc
Q 045849 315 HAY 317 (320)
Q Consensus 315 H~y 317 (320)
|..
T Consensus 229 H~~ 231 (282)
T cd07407 229 HVR 231 (282)
T ss_pred ccc
Confidence 953
No 63
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.51 E-value=6.2e-07 Score=78.54 Aligned_cols=146 Identities=16% Similarity=0.113 Sum_probs=71.3
Q ss_pred CCceE-EEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC------
Q 045849 145 KGQTL-LFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY------ 217 (320)
Q Consensus 145 ~~d~v-l~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~------ 217 (320)
.+|.+ +.+||+....... .........+.++. .++.++.||||+...... +....+...+|.
T Consensus 50 ~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~l~~----~g~da~~GNHefd~g~~~-----l~~~~~~~~~~~l~aN~~ 118 (264)
T cd07411 50 NPNTLLLDGGDTWQGSGEA--LYTRGQAMVDALNA----LGVDAMVGHWEFTYGPER-----VRELFGRLNWPFLAANVY 118 (264)
T ss_pred CCCeEEEeCCCccCCChHH--hhcCChhHHHHHHh----hCCeEEecccccccCHHH-----HHHHHhhCCCCEEEEEEE
Confidence 67876 5699999653211 11112223333333 444554599999643210 011111111110
Q ss_pred ---CCCCCCCCcEEEEEeCc--EEEEEEcccCCCC----------CChHHHHHHHHhcccC-CCCCCCEEEEEeccccee
Q 045849 218 ---RASGSTAPFWYSIKRAS--VYIIVLSSYSAYG----------KYTPQYKWLEEELPKV-NRSETPWLIVLMHAPWYN 281 (320)
Q Consensus 218 ---~~~~~~~~~~ys~~~g~--v~fi~lds~~~~~----------~~~~q~~WL~~~L~~~-~~~~~~~~iv~~H~P~~~ 281 (320)
.+.. ....|..++.++ +.||++.+..... ......+.+++.+++. +..+.+.+|++.|-+...
T Consensus 119 ~~~~~~~-~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~ 197 (264)
T cd07411 119 DDEAGER-VFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV 197 (264)
T ss_pred eCCCCCc-ccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh
Confidence 0001 122355667787 4566665431100 0122334444442222 124678899999976532
Q ss_pred cCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 282 SYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
. . .+.++ .+||++|+||.|..
T Consensus 198 ~--------~-------~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 198 D--------V-------ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred h--------H-------HHHhcCCCCcEEEeCccccc
Confidence 1 1 22233 47999999999963
No 64
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.50 E-value=9.1e-07 Score=80.03 Aligned_cols=117 Identities=15% Similarity=0.185 Sum_probs=71.9
Q ss_pred CCCeEEEEEEcCCCCCCc-----H---------HHHHH---HHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHh
Q 045849 115 DVPYSFGLIGDLGQSYDS-----N---------VTLTH---YERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE 177 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~-----~---------~~l~~---~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~ 177 (320)
...+|++.++|.|.-.+. . .-+.+ +.....+||.++++||+.+++.+. ...+|....+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~--~~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWA--GDEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccC--ChHHHHHHHHHHH
Confidence 468999999999864311 0 01111 222235999999999999865543 2345655433344
Q ss_pred hh---hccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccC
Q 045849 178 RS---AAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYS 244 (320)
Q Consensus 178 ~~---~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~ 244 (320)
.+ ..++|++.++||||.+.....-.. ....|.+.| ++..-+|+.|++.|+++|++.
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~~~~~-~i~Rfe~~f----------g~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNELIPE-WIDRFESVF----------GPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HhhCCCCCCeeEEeCCccccccccccchh-HHHHHHHhh----------cchhhhhccCCceeEEeeehh
Confidence 44 247999999999999753211100 012233322 224456889999999999864
No 65
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.48 E-value=2.4e-06 Score=89.35 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=93.5
Q ss_pred CCCeEEEEEEcCCCCCCcHHH----HHHHHhCCCCCceEEE-cccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCC
Q 045849 115 DVPYSFGLIGDLGQSYDSNVT----LTHYERNPRKGQTLLF-VGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTA 189 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~-~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (320)
...++|+.++|+|........ ++++.+. +|+.|++ +||++...... .........+.++.+ -.-+.++
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~--~~~~l~ld~GD~~~gs~~~--~~~~g~~~~~~ln~l---g~d~~~~ 730 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEE--NPNTILVDAGDVYQGSLYS--NLLKGLPVLKMMKEM---GYDASTF 730 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhh--CCCeEEEecCCCCCCcchh--hhcCChHHHHHHhCc---CCCEEEe
Confidence 356999999999965433333 3444443 7787766 99998543211 111122333344332 2335699
Q ss_pred CCCccccCCCC-----CCcc------cCc----ccc-eeeeCCCCC-CCCCCCcEEEEEeCcE--EEEEEcccCCC----
Q 045849 190 GNHEIDFYPEI-----GETV------PFK----PYS-HRYHVPYRA-SGSTAPFWYSIKRASV--YIIVLSSYSAY---- 246 (320)
Q Consensus 190 GNHD~~~~~~~-----~~~~------~~~----~~~-~~f~~p~~~-~~~~~~~~ys~~~g~v--~fi~lds~~~~---- 246 (320)
||||+.+.... .... .|. .+. ........+ .......|..++.+++ -||++-+....
T Consensus 731 GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~ 810 (1163)
T PRK09419 731 GNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTS 810 (1163)
T ss_pred cccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccC
Confidence 99999643210 0000 000 000 000001010 0111234666778874 56666542110
Q ss_pred ----C--CChHHHHHHHHhcccCC-CCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 247 ----G--KYTPQYKWLEEELPKVN-RSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 247 ----~--~~~~q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
. ...+..+.+++..++.+ ..+.+.+|++.|......... + ......|.++. +||++|.||+|..
T Consensus 811 p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~----~---~~~~~~lA~~v~gIDvIigGHsH~~ 882 (1163)
T PRK09419 811 PGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT----G---EITGLELAKKVKGVDAIISAHTHTL 882 (1163)
T ss_pred CCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc----c---ccHHHHHHHhCCCCCEEEeCCCCcc
Confidence 0 01222333433333322 146788999999887532111 0 11223444444 7999999999975
No 66
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.46 E-value=5.5e-06 Score=71.65 Aligned_cols=172 Identities=16% Similarity=0.121 Sum_probs=87.2
Q ss_pred EEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
||+++||.=..... ...|.++.+. .++||+|..||++.... . -. ....+.+.. ..+- +.+.|||+++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~-g--l~---~~~~~~L~~--~G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKE-YKIDFVIANGENAAGGK-G--IT---PKIAKELLS--AGVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHH-CCCCEEEECCccccCCC-C--CC---HHHHHHHHh--cCCC-EEEecccccC
Confidence 58899998543322 2335555554 37899999999986531 1 01 222233333 2344 4466999996
Q ss_pred cCCCCCCc-ccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCC--CCCChHHHHHHHHhcccCCCCCCCEEE
Q 045849 196 FYPEIGET-VPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSA--YGKYTPQYKWLEEELPKVNRSETPWLI 272 (320)
Q Consensus 196 ~~~~~~~~-~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~--~~~~~~q~~WL~~~L~~~~~~~~~~~i 272 (320)
.. ..... .....-....++|.. .....|..++.+++++-+++-... ....+.-++-+++.+++.+. +.+.+|
T Consensus 71 ~g-el~~~l~~~~~~l~~aN~~~~---~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D~II 145 (255)
T cd07382 71 KK-EILDFIDEEPRLLRPANYPPG---TPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EADIIF 145 (255)
T ss_pred cc-hHHHHHhcCcCceEeeecCCC---CCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCCEEE
Confidence 43 10000 000000111123321 123346777888766555443211 11122223345555555432 567899
Q ss_pred EEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 273 VLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 273 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
|.+|--..+ .+..+...+ ..+||+|+.||+|..
T Consensus 146 V~~H~g~ts-----------Ek~ala~~l-dg~VdvIvGtHTHv~ 178 (255)
T cd07382 146 VDFHAEATS-----------EKIALGWYL-DGRVSAVVGTHTHVQ 178 (255)
T ss_pred EEECCCCCH-----------HHHHHHHhC-CCCceEEEeCCCCcc
Confidence 999973211 111222111 336999999999974
No 67
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.45 E-value=2.7e-07 Score=77.78 Aligned_cols=65 Identities=22% Similarity=0.184 Sum_probs=40.6
Q ss_pred EEEEcCCCCCCcHHHHHHHHhCC----------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh-----hccCCe
Q 045849 121 GLIGDLGQSYDSNVTLTHYERNP----------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS-----AAYQPW 185 (320)
Q Consensus 121 ~~~gD~~~~~~~~~~l~~~~~~~----------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~P~ 185 (320)
+++||+|.... .+.++++.. .+.|.++++||+++.+. +. .+..+.+..+ ....++
T Consensus 1 ~vi~DIHG~~~---~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~----~~---~~vl~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 1 VAIGDLHGDLD---AFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGP----DV---IEILWLLYKLEQEAAKAGGKV 70 (208)
T ss_pred CEEeCccCCHH---HHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCc----CH---HHHHHHHHHHHHHHHhcCCeE
Confidence 37899997643 333333221 26799999999996532 11 2223333332 235689
Q ss_pred EeCCCCCccc
Q 045849 186 IWTAGNHEID 195 (320)
Q Consensus 186 ~~~~GNHD~~ 195 (320)
+++.||||..
T Consensus 71 ~~l~GNHE~~ 80 (208)
T cd07425 71 HFLLGNHELM 80 (208)
T ss_pred EEeeCCCcHH
Confidence 9999999985
No 68
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.45 E-value=4.9e-07 Score=78.59 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=48.7
Q ss_pred eEEEEEEcCCCCCCc---------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-c-C
Q 045849 118 YSFGLIGDLGQSYDS---------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-Y-Q 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 183 (320)
+||++++|+|.+... ...++++. .. .++|+||++||+.+.... .......+.++++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~-~~~D~lli~GDi~d~~~p---~~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKA-EQIDALLVAGDVFDTANP---PAEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHH-cCCCEEEECCccCCCCCC---CHHHHHHHHHHHHHHHhcCCc
Confidence 589999999986421 11233332 22 389999999999975431 11223345566666543 3 8
Q ss_pred CeEeCCCCCccc
Q 045849 184 PWIWTAGNHEID 195 (320)
Q Consensus 184 P~~~~~GNHD~~ 195 (320)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999984
No 69
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.42 E-value=7.1e-07 Score=72.65 Aligned_cols=65 Identities=15% Similarity=0.192 Sum_probs=39.7
Q ss_pred EEEEcCCCCCCc----------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 121 GLIGDLGQSYDS----------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 121 ~~~gD~~~~~~~----------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
.+++|+|.+... ...++.+.+...++|.||++||++..... . .+.+.++.+ ..|
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~-----~---~~~~~l~~~--~~~ 71 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKA-----G---TELELLSRL--NGR 71 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCCh-----H---HHHHHHHhC--CCC
Confidence 367888876432 11233344433478999999999964321 1 113333332 358
Q ss_pred eEeCCCCCccc
Q 045849 185 WIWTAGNHEID 195 (320)
Q Consensus 185 ~~~~~GNHD~~ 195 (320)
++.++||||..
T Consensus 72 ~~~v~GNHD~~ 82 (168)
T cd07390 72 KHLIKGNHDSS 82 (168)
T ss_pred eEEEeCCCCch
Confidence 99999999974
No 70
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=98.34 E-value=5.1e-06 Score=79.88 Aligned_cols=191 Identities=15% Similarity=0.121 Sum_probs=102.2
Q ss_pred CCCCCCCeEEEEEEcCCCCCC------------cHHH----HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHH
Q 045849 111 EVGPDVPYSFGLIGDLGQSYD------------SNVT----LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR 174 (320)
Q Consensus 111 ~~~~~~~~~f~~~gD~~~~~~------------~~~~----l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~ 174 (320)
.......++|+..+|+|.... .... +++..++ .+..++|.+||++........ ........+
T Consensus 20 ~~~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~-~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 20 AAAETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAE-NKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred cccCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhh-cCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 334457899999999997532 2212 3334444 255789999999976443221 123333444
Q ss_pred HHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCC--------C-CCCCCCCCcEEEEEeCc--EEEEEEccc
Q 045849 175 FVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVP--------Y-RASGSTAPFWYSIKRAS--VYIIVLSSY 243 (320)
Q Consensus 175 ~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p--------~-~~~~~~~~~~ys~~~g~--v~fi~lds~ 243 (320)
.|..+. .=+.++||||+.+.... +..+.....+| . .........|.-++.++ +-+|++.+.
T Consensus 98 ~mN~m~---yDa~tiGNHEFd~g~~~-----l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~ 169 (517)
T COG0737 98 LLNALG---YDAMTLGNHEFDYGLEA-----LARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTP 169 (517)
T ss_pred HHhhcC---CcEEeecccccccCHHH-----HHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCC
Confidence 554432 22569999999754210 01111111111 1 00111234578888887 456666641
Q ss_pred C--CC---C-----CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecC
Q 045849 244 S--AY---G-----KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGH 313 (320)
Q Consensus 244 ~--~~---~-----~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH 313 (320)
. .+ . ...+..+++++.+.+.+....+-+|++.|.+............. ...... .++|+++.||
T Consensus 170 ~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~~~-----~~iD~i~~GH 243 (517)
T COG0737 170 TIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDVAV-----PGIDLIIGGH 243 (517)
T ss_pred cccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccccc-----cCcceEeccC
Confidence 1 11 1 12345666666666554334788999999988764332111100 000000 3499999999
Q ss_pred cccc
Q 045849 314 VHAY 317 (320)
Q Consensus 314 ~H~y 317 (320)
.|.+
T Consensus 244 ~H~~ 247 (517)
T COG0737 244 SHTV 247 (517)
T ss_pred Cccc
Confidence 9953
No 71
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=98.34 E-value=3.3e-06 Score=74.76 Aligned_cols=192 Identities=15% Similarity=0.068 Sum_probs=85.8
Q ss_pred eEEEEEEcCCCCCC-------cH----HHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccC
Q 045849 118 YSFGLIGDLGQSYD-------SN----VTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~-------~~----~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
++|+..+|+|.... .. ..++++.+.. ...-++|.+||+....... .......-.+.++.+ ..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~--~~~~g~~~~~~~n~~--g~ 76 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPES--DLQDAEPDFRGMNLV--GY 76 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhH--HhcCcchHHHHHHhh--CC
Confidence 47899999987421 11 1233333220 1345899999998542211 111112223334432 23
Q ss_pred CeEeCCCCCccccCCCC-CC---cccCcccceeeeCCCCCCCCCCCcEEEEEeCcEE--EEEEcccCC-C-------CC-
Q 045849 184 PWIWTAGNHEIDFYPEI-GE---TVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVY--IIVLSSYSA-Y-------GK- 248 (320)
Q Consensus 184 P~~~~~GNHD~~~~~~~-~~---~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~--fi~lds~~~-~-------~~- 248 (320)
- +.++||||+++.... .. ...+.-......... + ......|..++.++++ |+++-+... . ..
T Consensus 77 D-a~~~GNHEfD~G~~~L~~~~~~~~fp~l~aNv~~~~-g-~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~~~~ 153 (285)
T cd07405 77 D-AMAVGNHEFDNPLEVLRQQMKWANFPLLSANIYQES-G-ERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYFEGI 153 (285)
T ss_pred c-EEeecccccccCHHHHHHHHhhCCCCEEEEEEEecC-C-CCccCCeEEEEECCEEEEEEEecccccccccCcCCcCCc
Confidence 3 447799999754211 00 000100000000010 1 0112346667788755 555544211 0 00
Q ss_pred -ChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 249 -YTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 249 -~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
..+..+=+++.+++.+..+++.+|++.|.......... ........+...+...+||++|.||+|..-
T Consensus 154 ~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 154 EFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred EEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 01111112222222211367889999998875322110 000111122222223589999999999753
No 72
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.33 E-value=2.5e-05 Score=67.79 Aligned_cols=174 Identities=15% Similarity=0.067 Sum_probs=91.2
Q ss_pred eEEEEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+||+++||.=.... ....|.++.+. .++||+|..||++-.+ .. -. ....+.+.. ..+-++ +.|||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~~gG-~G-i~----~~~~~~L~~--~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSK-YQADLVIANGENTTHG-KG-LT----LKIYEFLKQ--SGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHh-CCCCEEEEcCcccCCC-CC-CC----HHHHHHHHh--cCCCEE-Eccchhc
Confidence 58999999854321 12334555555 3789999999998542 11 01 122222222 345555 4599999
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccC-CCC-C--ChHHHHHHHHhcccCCCCCCCE
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYS-AYG-K--YTPQYKWLEEELPKVNRSETPW 270 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~-~~~-~--~~~q~~WL~~~L~~~~~~~~~~ 270 (320)
+..................++|.. .....|..+..++..+-+++-.. .+. . ...-++-+++.+++.+ .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 743100000000111112233321 12234566777876666655321 111 1 1222233444444432 24678
Q ss_pred EEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 271 LIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
+||.+|--. ... +.....+-+.+|++|+.-|+|.-
T Consensus 147 IIVd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~ 181 (266)
T TIGR00282 147 IFVDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVP 181 (266)
T ss_pred EEEEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCC
Confidence 999999532 112 34456666889999999999974
No 73
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=98.32 E-value=1.3e-06 Score=69.21 Aligned_cols=117 Identities=19% Similarity=0.120 Sum_probs=74.1
Q ss_pred EEEEcCCCCCC-cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh-hhccCCeEeCCCCCccccCC
Q 045849 121 GLIGDLGQSYD-SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER-SAAYQPWIWTAGNHEIDFYP 198 (320)
Q Consensus 121 ~~~gD~~~~~~-~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~GNHD~~~~~ 198 (320)
+++||.+.... ....++++.+...+.|++|++||+..... +. +.|...... ....+|+|++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~----~~---~~~~~y~~g~~~~pipTyf~ggn~~----- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDE----DD---EELEAYKDGSKKVPIPTYFLGGNNP----- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCcc----ch---hhHHHHhcCCccCCCCEEEECCCCC-----
Confidence 36788876532 12334444444468899999999985432 11 334444332 346789999999997
Q ss_pred CCCCcccCcccceeeeCCCCCCCCCCCcEEEEEeCcEEEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEeccc
Q 045849 199 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASVYIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAP 278 (320)
Q Consensus 199 ~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P 278 (320)
+.-|+++|.|
T Consensus 69 ----------------------------------------------------------------------~~DILlTh~w 78 (150)
T cd07380 69 ----------------------------------------------------------------------GVDILLTSEW 78 (150)
T ss_pred ----------------------------------------------------------------------CCCEEECCCC
Confidence 2247888888
Q ss_pred ceecCCCCCC-----ccHHHHHHHHHHHHhCCCcEEEecCcc-cccc
Q 045849 279 WYNSYNYHYM-----EGETMRVMYEPWLVKYKVDVVFAGHVH-AYER 319 (320)
Q Consensus 279 ~~~~~~~~~~-----~~~~~~~~l~~l~~~~~v~lvl~GH~H-~y~R 319 (320)
|+........ ....-...+..++++.+....||||.| .|||
T Consensus 79 P~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer 125 (150)
T cd07380 79 PKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYER 125 (150)
T ss_pred chhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEee
Confidence 8664211100 011123466778889999999999999 8887
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.31 E-value=1.1e-06 Score=81.30 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=46.6
Q ss_pred eEEEEEEcCCCCCCc----H-----HHHHH---HHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh-ccCC
Q 045849 118 YSFGLIGDLGQSYDS----N-----VTLTH---YERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA-AYQP 184 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~----~-----~~l~~---~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P 184 (320)
+||++++|+|.+... . ..+.. ++.. .+||+||++||+.+.... .......+.+++..+. ..+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~-~~~D~viIaGDifD~~~p---~~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQE-HQVDAIIVAGDIFDTGSP---PSYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHh-cCCCEEEECCccccCCCC---cHHHHHHHHHHHHHHHhcCCc
Confidence 589999999987421 0 11222 2223 399999999999965321 1111223344444443 3589
Q ss_pred eEeCCCCCccc
Q 045849 185 WIWTAGNHEID 195 (320)
Q Consensus 185 ~~~~~GNHD~~ 195 (320)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999985
No 75
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.31 E-value=6.5e-06 Score=66.75 Aligned_cols=64 Identities=14% Similarity=0.025 Sum_probs=42.1
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
++|+++||+|..........++... .++|+|||+||.+.... ...+... -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~-~~~d~vih~GD~~~~~~--------~~~l~~~-----~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNL-EKVDAVIHAGDSTSPFT--------LDALEGG-----LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhh-cCCCEEEECCCcCCccc--------hHHhhcc-----cccceEEEEccCCCc
Confidence 6899999999876422222223333 49999999999995421 1111111 146899999999985
No 76
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.26 E-value=3e-06 Score=76.95 Aligned_cols=75 Identities=16% Similarity=0.055 Sum_probs=46.3
Q ss_pred eEEEEEEcCCCCCCc---------HHHHHHHH---hCCCCCceEEEcccccccCCCCCCCChhhhhHHH-HHhhhh-ccC
Q 045849 118 YSFGLIGDLGQSYDS---------NVTLTHYE---RNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR-FVERSA-AYQ 183 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~ 183 (320)
+||+++||+|.+... ...+++++ .. .++|+||++||+.+..... .......... +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~-~~vD~VliaGDlfD~~~~~--~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKA-HGITTWIQLGDTFDVRKAI--TQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHH-cCCCEEEECCcccCCCCCC--CHHHHHHHHHHHHHHHHHCCC
Confidence 589999999987431 12333332 22 3999999999999653211 1112222222 233442 479
Q ss_pred CeEeCCCCCccc
Q 045849 184 PWIWTAGNHEID 195 (320)
Q Consensus 184 P~~~~~GNHD~~ 195 (320)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999984
No 77
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=98.20 E-value=2.4e-05 Score=75.78 Aligned_cols=192 Identities=13% Similarity=0.076 Sum_probs=89.1
Q ss_pred CCCeEEEEEEcCCCCCC-------cHHH----HHHHHhC---CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh
Q 045849 115 DVPYSFGLIGDLGQSYD-------SNVT----LTHYERN---PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA 180 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~-------~~~~----l~~~~~~---~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
...++|+.++|+|.... .... ++++.+. ....-++|.+||+....... .-.......+.+..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s--~~~~g~~~i~~mN~~- 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES--DLQDAEPDFRGMNLI- 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh--hhcCCchhHHHHhcC-
Confidence 45899999999997532 1222 2333221 11345889999998542110 111112223334332
Q ss_pred ccCCeEeCCCCCccccCCCC-C---CcccCcccceeeeCCCCCCCCCCCcEEEEEeCcE--EEEEEcccCC--C------
Q 045849 181 AYQPWIWTAGNHEIDFYPEI-G---ETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASV--YIIVLSSYSA--Y------ 246 (320)
Q Consensus 181 ~~~P~~~~~GNHD~~~~~~~-~---~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~v--~fi~lds~~~--~------ 246 (320)
..- +.++||||+++.... . ....|.-..........+. .....|..++.+++ -||++-+... +
T Consensus 109 -g~D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~-~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~~ 185 (551)
T PRK09558 109 -GYD-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGE-RLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEYF 185 (551)
T ss_pred -CCC-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCC-cccCCeEEEEECCEEEEEEEEeccccccccCCCCc
Confidence 222 457899999754211 0 0000100000010111111 11234666788875 4566544211 0
Q ss_pred C--CChHHHHHHHHhcccCC-CCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC---CCcEEEecCcccc
Q 045849 247 G--KYTPQYKWLEEELPKVN-RSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY---KVDVVFAGHVHAY 317 (320)
Q Consensus 247 ~--~~~~q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~---~v~lvl~GH~H~y 317 (320)
. ...+..+-+++.+++.+ ..+.+.+|++.|.......... ...... ..+.++. +||++|.||+|.+
T Consensus 186 ~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~--~~~~~d---~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 186 TDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG--SNAPGD---VEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred CCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC--CCCccH---HHHHHhCCccCceEEEeCCCCcc
Confidence 0 01112222333222221 1467889999998875322110 000000 2334443 7999999999964
No 78
>PRK09453 phosphodiesterase; Provisional
Probab=98.19 E-value=4.4e-06 Score=68.92 Aligned_cols=75 Identities=12% Similarity=0.072 Sum_probs=44.3
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCC-CChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCH-DNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+|++++||+|......+.+.+..+. .++|.|+++||+++....... .........+.++. ...+++.+.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~--~~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNA--YADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHh--cCCceEEEccCCcch
Confidence 5899999999654322333333333 389999999999864221000 00012223333333 235899999999974
No 79
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=98.17 E-value=1.6e-05 Score=71.28 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=25.9
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+.+.+|+++|..-+. .. ..|.++. +||++|.||+|.+
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~ 244 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTL 244 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCcc
Confidence 4577899999973111 01 1344454 8999999999975
No 80
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.13 E-value=3.9e-06 Score=70.30 Aligned_cols=70 Identities=19% Similarity=0.213 Sum_probs=43.2
Q ss_pred EEEcCCCCCCcH---HHHHHHHh-CCCCCceEEEcccccccCCCCCCCChhhhhHHH----HHhhh-hccCCeEeCCCCC
Q 045849 122 LIGDLGQSYDSN---VTLTHYER-NPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGR----FVERS-AAYQPWIWTAGNH 192 (320)
Q Consensus 122 ~~gD~~~~~~~~---~~l~~~~~-~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~P~~~~~GNH 192 (320)
++||.|.+.... ..+...++ ...+.|.+.++||++. ++...+ .|.++.+ .+..+ .+.+|+|++.|||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~g~~--~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWIGDD--EPPQLHRQVAQKLLRLARKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhhcCC--cccHHHHHHHHHHHHHHhcCCeEEEecCch
Confidence 689999984332 22334333 3236699999999994 332221 3444322 22222 4569999999999
Q ss_pred ccc
Q 045849 193 EID 195 (320)
Q Consensus 193 D~~ 195 (320)
|+.
T Consensus 78 Dfl 80 (237)
T COG2908 78 DFL 80 (237)
T ss_pred HHH
Confidence 974
No 81
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=98.12 E-value=2.4e-05 Score=75.65 Aligned_cols=145 Identities=20% Similarity=0.188 Sum_probs=70.7
Q ss_pred CCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC-------
Q 045849 145 KGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY------- 217 (320)
Q Consensus 145 ~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~------- 217 (320)
..-++|.+||++...... .......-...+..+. -=+.++||||+++.... +..+.....+|.
T Consensus 49 ~n~l~ldaGD~~~gs~~~--~~~~g~~~i~~~N~~g---~Da~~lGNHEFd~G~~~-----l~~~~~~~~fp~l~aNv~~ 118 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYF--TLFGGRADAALMNAAG---FDFFTLGNHEFDAGNEG-----LKEFLEPLEIPVLSANVIP 118 (550)
T ss_pred CCeEEEECCCCCCCccch--hhcCCHHHHHHHhccC---CCEEEeccccccCCHHH-----HHHHHHhCCCCEEEEeeec
Confidence 345889999998643211 1111122233333221 23568999999753210 011111111111
Q ss_pred --CC-CCCCCCcEEEEEeCc--EEEEEEcccCC-C---CC-----ChHHHHHHH---HhcccCCCCCCCEEEEEecccce
Q 045849 218 --RA-SGSTAPFWYSIKRAS--VYIIVLSSYSA-Y---GK-----YTPQYKWLE---EELPKVNRSETPWLIVLMHAPWY 280 (320)
Q Consensus 218 --~~-~~~~~~~~ys~~~g~--v~fi~lds~~~-~---~~-----~~~q~~WL~---~~L~~~~~~~~~~~iv~~H~P~~ 280 (320)
.. ....-..|..++.++ +-||+|.+... . .. ..+..+=++ +.|++ .+.+.+|++.|....
T Consensus 119 ~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 119 DAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFE 195 (550)
T ss_pred CCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcH
Confidence 00 001123466677787 56777754211 0 00 011111122 33443 457889999997532
Q ss_pred ecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 281 NSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
. . ..+.++. +||++|+||+|.+
T Consensus 196 ~--------d-------~~la~~~~~iD~IigGHsH~~ 218 (550)
T TIGR01530 196 K--------N-------CEIAQKINDIDVIVSGDSHYL 218 (550)
T ss_pred H--------H-------HHHHhcCCCCCEEEeCCCCcc
Confidence 1 0 1233343 8999999999985
No 82
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.01 E-value=8.9e-06 Score=66.48 Aligned_cols=49 Identities=20% Similarity=0.226 Sum_probs=31.8
Q ss_pred CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 144 RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 144 ~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.+||.||++||+++.... .....+.... ........+|++.++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~--~~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGG--LSRQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccc--cCHHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 389999999999965321 1111122211 233334678999999999985
No 83
>PHA02239 putative protein phosphatase
Probab=97.97 E-value=1.7e-05 Score=67.93 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=42.3
Q ss_pred eEEEEEEcCCCCCCcH-HHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 118 YSFGLIGDLGQSYDSN-VTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
++++++||+|...... ..++.+.......|.++++||+++.+.. ..+.....++.+....++++++||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~------s~~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKR------SKDVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC------hHHHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 4789999999653222 2223332221135999999999975321 1122222222223346899999999974
No 84
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.87 E-value=0.00011 Score=73.29 Aligned_cols=195 Identities=14% Similarity=0.088 Sum_probs=91.7
Q ss_pred CCCCCCCCCCeEEEEEEcCCCCCC-------------cHH----HHHHHHhCCCCCceEEEcccccccCCCCCCCC----
Q 045849 108 TPPEVGPDVPYSFGLIGDLGQSYD-------------SNV----TLTHYERNPRKGQTLLFVGDLSYADNYPCHDN---- 166 (320)
Q Consensus 108 t~p~~~~~~~~~f~~~gD~~~~~~-------------~~~----~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~---- 166 (320)
+.|..+....++|+..+|+|.... ... .++++.+. ...-++|.+||++....+.....
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae-~~NtLllD~GD~iQGSpl~~~~a~~~~ 184 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKE-NPNVVLVDNGDTIQGTPLGTYKAIVDP 184 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHh-CCCEEEEecCCCCCCCcccchhhhccc
Confidence 344445556899999999997521 111 23334333 13358899999997543211000
Q ss_pred -hhh--hhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCC---------CCCCCCCCcEEEEEe--
Q 045849 167 -NRW--DTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPY---------RASGSTAPFWYSIKR-- 232 (320)
Q Consensus 167 -~~~--~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~---------~~~~~~~~~~ys~~~-- 232 (320)
... .-..+.|..+.- =..++||||+++.... +..+.....+|. .+. ..-..|--++.
T Consensus 185 ~~~g~~~P~i~amN~LGy---DA~tLGNHEFDyG~d~-----L~~~l~~a~fPvl~ANV~~~~~~~-~~~~PY~I~e~~~ 255 (814)
T PRK11907 185 VEEGEQHPMYAALEALGF---DAGTLGNHEFNYGLDY-----LEKVIATANMPIVNANVLDPTTGD-FLYTPYTIVTKTF 255 (814)
T ss_pred cccCcchHHHHHHhccCC---CEEEechhhcccCHHH-----HHHHHHhCCCCEEEeeeeecCCCC-ccCCCeEEEEEEE
Confidence 000 112334443321 2568999999754211 011111111111 000 01123444443
Q ss_pred ---Cc------EEEEEEcccC--CCC--------CChHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHH
Q 045849 233 ---AS------VYIIVLSSYS--AYG--------KYTPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETM 293 (320)
Q Consensus 233 ---g~------v~fi~lds~~--~~~--------~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~ 293 (320)
++ |-||++-+.. .+. ...+-.+-+++...+.+..+++.+|++.|..+.........++ .
T Consensus 256 ~d~~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En--~ 333 (814)
T PRK11907 256 TDTEGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN--V 333 (814)
T ss_pred ecCCCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc--h
Confidence 32 5667664421 111 0122223333333332224688899999987643221110111 1
Q ss_pred HHHHHHHHHhCCCcEEEecCcccc
Q 045849 294 RVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 294 ~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
. ..|.+--+||++|.||+|..
T Consensus 334 ~---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 334 G---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred h---hHHhcCCCCCEEEECCCCCc
Confidence 1 12333348999999999974
No 85
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.85 E-value=6.3e-05 Score=78.96 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=30.5
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-...... .. ......|.++. +||++|.||+|..
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~--~~---en~~~~la~~~~gID~Il~GHsH~~ 280 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSS--GA---EDSVYDLAEKTKGIDAIVAGHQHGL 280 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCC--Cc---chHHHHHHHhCCCCcEEEeCCCccc
Confidence 568889999998875432111 11 12233455454 8999999999975
No 86
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.79 E-value=3.7e-05 Score=67.36 Aligned_cols=66 Identities=29% Similarity=0.318 Sum_probs=42.4
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
++++++||+|..... +.++++.. .+.|.++++||+++.+. + -.+..+.+..+ ..+++++.||||.
T Consensus 1 M~~~vIGDIHG~~~~---l~~ll~~~~~~~~~D~li~lGDlVdrGp----~---s~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDE---LQRLLEKIDFDPAKDTLWLVGDLVNRGP----D---SLEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHH---HHHHHHhcCCCCCCCEEEEeCCccCCCc----C---HHHHHHHHHhc--CCCeEEEecChhH
Confidence 468999999976433 33333321 26899999999997532 1 12233333333 3468899999998
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 69 ~ 69 (275)
T PRK00166 69 H 69 (275)
T ss_pred H
Confidence 4
No 87
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.79 E-value=4e-05 Score=64.57 Aligned_cols=63 Identities=21% Similarity=0.128 Sum_probs=40.5
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|... ..+.++.+.. .++|.++++||+++.+.. . .+..+.+ .. .+++++.||||..
T Consensus 2 ri~~isDiHg~~---~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~-----~--~~~~~~l---~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHY---SLLQKALDAVGFDPARDRLISVGDLIDRGPE-----S--LACLELL---LE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCH---HHHHHHHHHcCCCCCCCEEEEeCCcccCCCC-----H--HHHHHHH---hc-CCEEEeECCChHH
Confidence 689999999653 3444443321 268999999999965321 1 1222222 22 4689999999975
No 88
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.76 E-value=7.2e-05 Score=64.70 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=46.6
Q ss_pred EEEEcCCCCCCc--H---HHHHHHHhCC----CCCceEEEcccccccCCCCCC-C--------ChhhhhHHHHHhhhhcc
Q 045849 121 GLIGDLGQSYDS--N---VTLTHYERNP----RKGQTLLFVGDLSYADNYPCH-D--------NNRWDTWGRFVERSAAY 182 (320)
Q Consensus 121 ~~~gD~~~~~~~--~---~~l~~~~~~~----~~~d~vl~~GD~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~ 182 (320)
++++|+|.+... . ..+.+.++.. .++|.||++||++........ . ...+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 678999976432 1 1223332221 257999999999965211000 0 01234456666777778
Q ss_pred CCeEeCCCCCccc
Q 045849 183 QPWIWTAGNHEID 195 (320)
Q Consensus 183 ~P~~~~~GNHD~~ 195 (320)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999984
No 89
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.76 E-value=9.9e-05 Score=70.44 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=51.9
Q ss_pred CCCeEEEEEEcCCCCCCc--H---HHHHHHHh-C-------CCCCceEEEcccccccCCCCCC-C--------ChhhhhH
Q 045849 115 DVPYSFGLIGDLGQSYDS--N---VTLTHYER-N-------PRKGQTLLFVGDLSYADNYPCH-D--------NNRWDTW 172 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~--~---~~l~~~~~-~-------~~~~d~vl~~GD~~~~~~~~~~-~--------~~~~~~~ 172 (320)
...+++++++|+|.+... . ..+.+.+. . ..+++.+|++||++...+.... + ..+.+.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 457899999999977532 1 12222222 0 1378999999999964221100 0 0112345
Q ss_pred HHHHhhhhccCCeEeCCCCCccc
Q 045849 173 GRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 173 ~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.++++.+...+|+++++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56667777789999999999984
No 90
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.74 E-value=7e-05 Score=64.37 Aligned_cols=67 Identities=28% Similarity=0.385 Sum_probs=42.6
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC------------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeE
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP------------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWI 186 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~------------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (320)
||+++||+|.... .|+++++.. .+.|.++++||+++.+. ...+..+.+..+.....++
T Consensus 2 ~i~vigDIHG~~~---~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~-------~s~evl~~l~~l~~~~~~~ 71 (234)
T cd07423 2 PFDIIGDVHGCYD---ELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGP-------DSPEVLRLVMSMVAAGAAL 71 (234)
T ss_pred CeEEEEECCCCHH---HHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCC-------CHHHHHHHHHHHhhCCcEE
Confidence 7899999997643 333333321 13689999999997532 1123334444443334688
Q ss_pred eCCCCCccc
Q 045849 187 WTAGNHEID 195 (320)
Q Consensus 187 ~~~GNHD~~ 195 (320)
++.||||..
T Consensus 72 ~v~GNHE~~ 80 (234)
T cd07423 72 CVPGNHDNK 80 (234)
T ss_pred EEECCcHHH
Confidence 999999974
No 91
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.67 E-value=9.8e-05 Score=62.86 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=46.8
Q ss_pred eEEEEEEcCCCCCCc--------------HHHHHHHHhC--CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 118 YSFGLIGDLGQSYDS--------------NVTLTHYERN--PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~--------------~~~l~~~~~~--~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
-+.++++|+|.+... ...++++.+. ..+||.||++||+...... ...+..+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~----~~~~~~~~~~l~~~-- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK----GLEWRFIREFIEVT-- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC----hHHHHHHHHHHHhc--
Confidence 357899999987421 1334444331 1379999999999965331 13345555555543
Q ss_pred cCCeEeCCCCCccc
Q 045849 182 YQPWIWTAGNHEID 195 (320)
Q Consensus 182 ~~P~~~~~GNHD~~ 195 (320)
..+++.++||||..
T Consensus 89 ~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 89 FRDLILIRGNHDAL 102 (225)
T ss_pred CCcEEEECCCCCCc
Confidence 35899999999974
No 92
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.65 E-value=0.00021 Score=62.99 Aligned_cols=179 Identities=23% Similarity=0.264 Sum_probs=96.5
Q ss_pred eEEEEEEcCCCCCC-cHHHHHHHHhC-CCCCceEEEcccccccCCCC-CCC---ChhhhhHHHHHh----hhhccCCeEe
Q 045849 118 YSFGLIGDLGQSYD-SNVTLTHYERN-PRKGQTLLFVGDLSYADNYP-CHD---NNRWDTWGRFVE----RSAAYQPWIW 187 (320)
Q Consensus 118 ~~f~~~gD~~~~~~-~~~~l~~~~~~-~~~~d~vl~~GD~~~~~~~~-~~~---~~~~~~~~~~~~----~~~~~~P~~~ 187 (320)
+||+|-|++|..-+ ..+++..+.+. ..+.|++|+.||.-.-.+.. ... ...+.....+++ +..+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 58999999997643 34555555543 24889999999995322110 000 122223233332 3457789999
Q ss_pred CCCCCccccCCCCCCcccCcccceeeeCCCCCCCCCCCcEE-----EEEeCcEEEEEEccc---CCCCC-------C---
Q 045849 188 TAGNHEIDFYPEIGETVPFKPYSHRYHVPYRASGSTAPFWY-----SIKRASVYIIVLSSY---SAYGK-------Y--- 249 (320)
Q Consensus 188 ~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~y-----s~~~g~v~fi~lds~---~~~~~-------~--- 249 (320)
+=||||... |... +|..+ ....+.|| ...+|+||+-+|..- .+|.. +
T Consensus 81 IGGNHEAsn------------yL~e--LpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEASN------------YLQE--LPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHHH------------HHHh--cccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 999999852 2211 22211 11234454 357789999888751 12211 0
Q ss_pred -------hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCC-----ccHHH----------HHHHHHHHHhCCCc
Q 045849 250 -------TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYM-----EGETM----------RVMYEPWLVKYKVD 307 (320)
Q Consensus 250 -------~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~-----~~~~~----------~~~l~~l~~~~~v~ 307 (320)
..+.+=+ .|... +.+--|.+.|-=|-+-...... ...-+ ...+..||++.+..
T Consensus 146 tiRsiYHvR~~dV~--~Lkql---k~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~ 220 (456)
T KOG2863|consen 146 TIRSIYHVRISDVA--KLKQL---KHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQ 220 (456)
T ss_pred hhhhhhhhhhhhhH--HHHhh---cCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcc
Confidence 1222211 12221 2233477788644332111100 00111 23678899999999
Q ss_pred EEEecCccc
Q 045849 308 VVFAGHVHA 316 (320)
Q Consensus 308 lvl~GH~H~ 316 (320)
.+|+.|.|+
T Consensus 221 yWfsAHLH~ 229 (456)
T KOG2863|consen 221 YWFSAHLHV 229 (456)
T ss_pred hhhhhhHhh
Confidence 999999996
No 93
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.63 E-value=9.7e-05 Score=63.92 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=41.8
Q ss_pred eEEEEEEcCCCCCCcHHHHHHHHhCC-----------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeE
Q 045849 118 YSFGLIGDLGQSYDSNVTLTHYERNP-----------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWI 186 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~~~~l~~~~~~~-----------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (320)
+|+.++||+|.... .|.++++.. .+-|.++++||+++.+.. . .+..+.+..+...-.++
T Consensus 1 ~~~~vIGDIHG~~~---~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~---S----~~vl~~~~~~~~~~~~~ 70 (245)
T PRK13625 1 MKYDIIGDIHGCYQ---EFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPH---S----LRMIEIVWELVEKKAAY 70 (245)
T ss_pred CceEEEEECccCHH---HHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcC---h----HHHHHHHHHHhhCCCEE
Confidence 46899999997643 333333321 134789999999976421 1 12223333333345789
Q ss_pred eCCCCCccc
Q 045849 187 WTAGNHEID 195 (320)
Q Consensus 187 ~~~GNHD~~ 195 (320)
++.||||..
T Consensus 71 ~l~GNHE~~ 79 (245)
T PRK13625 71 YVPGNHCNK 79 (245)
T ss_pred EEeCccHHH
Confidence 999999964
No 94
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=97.53 E-value=0.00026 Score=69.36 Aligned_cols=46 Identities=24% Similarity=0.285 Sum_probs=28.1
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-...... ..+... ..+.+. +||++|+||+|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~--~~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQP--GAENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCcccc--ccchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 467889999998765421110 111111 123444 8999999999974
No 95
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.53 E-value=0.00014 Score=61.83 Aligned_cols=63 Identities=22% Similarity=0.211 Sum_probs=40.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|.... .++++++.. .+.|.++++||+++.+.. . .+..+.++ . ..++++.||||..
T Consensus 16 ri~visDiHg~~~---~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~----~---~~~l~~l~---~-~~~~~v~GNHE~~ 81 (218)
T PRK09968 16 HIWVVGDIHGEYQ---LLQSRLHQLSFCPETDLLISVGDNIDRGPE----S---LNVLRLLN---Q-PWFISVKGNHEAM 81 (218)
T ss_pred eEEEEEeccCCHH---HHHHHHHhcCCCCCCCEEEECCCCcCCCcC----H---HHHHHHHh---h-CCcEEEECchHHH
Confidence 8999999997643 333333221 367999999999975321 1 12222222 2 3578899999974
No 96
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.51 E-value=0.0017 Score=64.79 Aligned_cols=46 Identities=24% Similarity=0.188 Sum_probs=28.0
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhC-CCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKY-KVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-..... .+.+. .-.. +++. +||+||.||+|..
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~~-l~~v~gID~IlgGHsH~~ 289 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASYY-LTEVPGVDAVLMGHSHTE 289 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhHH-HhcCCCCCEEEECCCCCc
Confidence 46788999999876432111 11111 1111 3444 8999999999975
No 97
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.46 E-value=0.00018 Score=61.05 Aligned_cols=63 Identities=24% Similarity=0.199 Sum_probs=39.9
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|++++||+|.... .|+++++.. .+.|-++++||+++.+.. . .+-.+.+.. ..++++.||||..
T Consensus 18 ri~vigDIHG~~~---~L~~lL~~i~~~~~~D~li~lGDlvDrGp~----s---~~vl~~l~~----~~~~~v~GNHE~~ 83 (218)
T PRK11439 18 HIWLVGDIHGCFE---QLMRKLRHCRFDPWRDLLISVGDLIDRGPQ----S---LRCLQLLEE----HWVRAVRGNHEQM 83 (218)
T ss_pred eEEEEEcccCCHH---HHHHHHHhcCCCcccCEEEEcCcccCCCcC----H---HHHHHHHHc----CCceEeeCchHHH
Confidence 8999999997643 333333322 257899999999975431 1 122222222 2467899999974
No 98
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.40 E-value=0.00026 Score=60.30 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=40.4
Q ss_pred EEEEEcCCCCCCcHHH-HHHHHhCC------CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCC
Q 045849 120 FGLIGDLGQSYDSNVT-LTHYERNP------RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~-l~~~~~~~------~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 192 (320)
+.++||+|........ ++++.... ...|.+|++||+++.+.. -....+.+..+...-.++++.|||
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-------S~~vl~~l~~l~~~~~~~~l~GNH 73 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-------IRELLEIVKSMVDAGHALAVMGNH 73 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-------HHHHHHHHHHhhcCCCEEEEEccC
Confidence 3689999976543322 22221110 135799999999976431 122233344443334688999999
Q ss_pred ccc
Q 045849 193 EID 195 (320)
Q Consensus 193 D~~ 195 (320)
|..
T Consensus 74 E~~ 76 (222)
T cd07413 74 EFN 76 (222)
T ss_pred cHH
Confidence 974
No 99
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.39 E-value=0.00029 Score=61.09 Aligned_cols=63 Identities=29% Similarity=0.316 Sum_probs=39.8
Q ss_pred EEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 121 GLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 121 ~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
.++||+|.... .++++++.. .+.|.++++||+++.+. + -.+..+.+..+. ..+..+.||||..
T Consensus 2 yvIGDIHG~~~---~L~~LL~~i~~~~~~D~Li~lGDlVdRGp----~---s~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYD---ELQRLLEKINFDPAKDRLWLVGDLVNRGP----D---SLETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHH---HHHHHHHhcCCCCCCCEEEEecCcCCCCc----C---HHHHHHHHHhcC--CCeEEEcCCchHH
Confidence 57999997643 333333321 25799999999997532 1 122334444432 3678999999985
No 100
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.32 E-value=0.0051 Score=48.12 Aligned_cols=68 Identities=25% Similarity=0.279 Sum_probs=42.5
Q ss_pred EEEEEEcCCCCCCc--------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC
Q 045849 119 SFGLIGDLGQSYDS--------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP 184 (320)
Q Consensus 119 ~f~~~gD~~~~~~~--------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (320)
.+-++||+|.+... ...+..+.+....-|.+-++||++..-+ .-......++.|...
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n-------~~~~a~~IlerLnGr-- 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN-------RERAAGLILERLNGR-- 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc-------hhhHHHHHHHHcCCc--
Confidence 46778999876421 1234455554434489999999995422 123445555555443
Q ss_pred eEeCCCCCccc
Q 045849 185 WIWTAGNHEID 195 (320)
Q Consensus 185 ~~~~~GNHD~~ 195 (320)
...++||||-.
T Consensus 76 khlv~GNhDk~ 86 (186)
T COG4186 76 KHLVPGNHDKC 86 (186)
T ss_pred EEEeeCCCCCC
Confidence 37899999974
No 101
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=97.29 E-value=0.0052 Score=60.56 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=27.6
Q ss_pred CCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHh-CCCcEEEecCcccc
Q 045849 266 SETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVK-YKVDVVFAGHVHAY 317 (320)
Q Consensus 266 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~v~lvl~GH~H~y 317 (320)
.+++.+|++.|...-...... ..+. .... +.+ -+||++|.||+|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~--~aen---~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKA--MAEN---SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccc--cccc---hhHH-HhcCCCCCEEEeCCCCcc
Confidence 468889999998764321110 0011 1111 234 38999999999974
No 102
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=97.28 E-value=0.0041 Score=53.57 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=35.7
Q ss_pred HHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 254 KWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 254 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+-+++.+++++. +++.+||+.|-..-... ........+...+-+.++|+|+.||.|..+
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q 220 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQ 220 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCC
Confidence 335555554432 37889999996442111 111223344445556799999999999864
No 103
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.27 E-value=0.0072 Score=52.35 Aligned_cols=137 Identities=14% Similarity=0.148 Sum_probs=75.3
Q ss_pred EEEEEcCCCCCCcH-----HHHHHHHh-C---------CCCCceEEEcccccccCCCCCC---------------CChhh
Q 045849 120 FGLIGDLGQSYDSN-----VTLTHYER-N---------PRKGQTLLFVGDLSYADNYPCH---------------DNNRW 169 (320)
Q Consensus 120 f~~~gD~~~~~~~~-----~~l~~~~~-~---------~~~~d~vl~~GD~~~~~~~~~~---------------~~~~~ 169 (320)
+++++|.+.+.... ..+.+++. . ..+...+|++||.+...+.... .....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68889998765421 22222222 1 1244579999999975432110 02234
Q ss_pred hhHHHHHhhhhccCCeEeCCCCCccccCCCCCCcccCcccceeeeCCCCC---CCCCCCcEEEEEeCcEEEEEEcccC--
Q 045849 170 DTWGRFVERSAAYQPWIWTAGNHEIDFYPEIGETVPFKPYSHRYHVPYRA---SGSTAPFWYSIKRASVYIIVLSSYS-- 244 (320)
Q Consensus 170 ~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~---~~~~~~~~ys~~~g~v~fi~lds~~-- 244 (320)
+.+..++..+...+|+...|||||-... .... ...... .+|... .-.....=|.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~-~lPQ----qplh~~-lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANH-SLPQ----QPLHRC-LFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccc-cCCC----CCCCHH-HhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHH
Confidence 5566777888899999999999998522 1111 111000 011100 0001112356889999999977642
Q ss_pred ---CCCCChHHHHHHHHhccc
Q 045849 245 ---AYGKYTPQYKWLEEELPK 262 (320)
Q Consensus 245 ---~~~~~~~q~~WL~~~L~~ 262 (320)
.+...+.-++.|+..|+-
T Consensus 156 Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 156 DILKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHh
Confidence 123344556777777754
No 104
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=97.24 E-value=0.00054 Score=58.35 Aligned_cols=64 Identities=22% Similarity=0.171 Sum_probs=39.3
Q ss_pred EEEcCCCCCCcHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc-cCCeEeCCCCCccc
Q 045849 122 LIGDLGQSYDSNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA-YQPWIWTAGNHEID 195 (320)
Q Consensus 122 ~~gD~~~~~~~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~~ 195 (320)
++||+|... ..+.++++.. .++|.+|++||+++.+. . .......+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~---~~l~~~l~~~~~~~~d~li~lGD~vdrg~----~---~~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCL---DDLLRLLEKIGFPPNDKLIFLGDYVDRGP----D---SVEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCH---HHHHHHHHHhCCCCCCEEEEECCEeCCCC----C---cHHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 689999654 3333333321 37899999999997532 1 1122223333221 45799999999985
No 105
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.17 E-value=0.0008 Score=58.92 Aligned_cols=70 Identities=14% Similarity=0.190 Sum_probs=41.3
Q ss_pred EEEEEEcCCCCCCcHHH-HHHHHhCC----CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhcc---CCeEeCCC
Q 045849 119 SFGLIGDLGQSYDSNVT-LTHYERNP----RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAY---QPWIWTAG 190 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~-l~~~~~~~----~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~P~~~~~G 190 (320)
++.++||+|........ ++.+.... ...+.+|++||+++.+. +. ....+++..+... ..++++.|
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP----dS---~eVld~L~~l~~~~~~~~vv~LrG 75 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP----ET---RKVIDFLISLPEKHPKQRHVFLCG 75 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC----CH---HHHHHHHHHhhhcccccceEEEec
Confidence 68999999987543333 33333221 13568999999997642 11 2223333333222 24788999
Q ss_pred CCccc
Q 045849 191 NHEID 195 (320)
Q Consensus 191 NHD~~ 195 (320)
|||..
T Consensus 76 NHE~~ 80 (304)
T cd07421 76 NHDFA 80 (304)
T ss_pred CChHH
Confidence 99964
No 106
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=97.06 E-value=0.00091 Score=58.35 Aligned_cols=67 Identities=28% Similarity=0.290 Sum_probs=40.4
Q ss_pred EEEEEEcCCCCCCcHHH-HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVT-LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
++.++||+|........ ++++.-. .+.|-++++||+++.+.. -.+..+++..+. ..+..+.||||..
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~-~~~D~l~~lGDlVdRGP~-------slevL~~l~~l~--~~~~~VlGNHD~~ 69 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFD-PGQDTLWLTGDLVARGPG-------SLEVLRYVKSLG--DAVRLVLGNHDLH 69 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcC-CCCCEEEEeCCccCCCCC-------HHHHHHHHHhcC--CCeEEEEChhHHH
Confidence 46889999986543333 2333212 256899999999976431 122233343332 2356899999974
No 107
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=97.06 E-value=0.00092 Score=57.29 Aligned_cols=171 Identities=15% Similarity=0.188 Sum_probs=96.8
Q ss_pred CceEEEcccccccCCCCCC---CChhhhhHHHHHh----hhhccCCeEeCCCCCccccCCCCCCcc----cCccccee--
Q 045849 146 GQTLLFVGDLSYADNYPCH---DNNRWDTWGRFVE----RSAAYQPWIWTAGNHEIDFYPEIGETV----PFKPYSHR-- 212 (320)
Q Consensus 146 ~d~vl~~GD~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~P~~~~~GNHD~~~~~~~~~~~----~~~~~~~~-- 212 (320)
|--++..||++.+.+.... +..+...|....+ .+...+|+|.-.||||..-+...-... ....|...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 3447889999988764332 2233333322222 234569999999999986321100000 00111111
Q ss_pred -----eeCCCCC-CCCCCCcEEEEEeCcEEEEEEcccCCC-CC-ChHHHHHHHHhcccCCCCCCCEEEEEecccc--eec
Q 045849 213 -----YHVPYRA-SGSTAPFWYSIKRASVYIIVLSSYSAY-GK-YTPQYKWLEEELPKVNRSETPWLIVLMHAPW--YNS 282 (320)
Q Consensus 213 -----f~~p~~~-~~~~~~~~ys~~~g~v~fi~lds~~~~-~~-~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~--~~~ 282 (320)
|..|... .......-||+++|+++.+-+-....- .. -.--+-||+.+|........ -++++.|.-. +++
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgr-pv~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGR-PVYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCC-ceeehhhhCccceec
Confidence 1111110 112234578999999988876553211 11 13346799999976432333 4899999865 443
Q ss_pred CCCCC--------Cc------cHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 283 YNYHY--------ME------GETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 283 ~~~~~--------~~------~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
..++. .. ....|..|...++-|+|...+.||-|..
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~ 334 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDF 334 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEecccccccc
Confidence 33321 00 1235778888899999999999999964
No 108
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=97.03 E-value=0.012 Score=50.81 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=34.0
Q ss_pred HHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 256 LEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 256 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+++.+++++ .+++.+||+.|-..-.... .......+..-+-+.++|+|+.||.|..+
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~-----p~~~~~~~A~~l~~~G~DvIiG~H~H~~~ 218 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE-----PTDEQRELAHALIDAGADVVIGHHPHVLQ 218 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC-----CCHHHHHHHHHHHHcCCCEEEcCCCCcCC
Confidence 444444443 2578999999976522111 11122334444445789999999999875
No 109
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=97.03 E-value=0.0033 Score=44.15 Aligned_cols=70 Identities=26% Similarity=0.267 Sum_probs=44.5
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
+|..+++..- ..+++.|+|...... ..-.|+|....+.. ........ .. ...+.|.+|+|+|.|
T Consensus 2 ~P~~l~v~~~--~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~----~~~~~~~~----~~--~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNI--SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS----DWQEVTVP----GN--ETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEE--CSSEEEEEEEESSSTSSSESEEEEEEEETTSSS----EEEEEEEE----TT--SSEEEEESCCTTSEE
T ss_pred cCcCeEEEEC--CCCEEEEEEECCCCCCCCeeEEEEEEEecccce----eeeeeeee----ee--eeeeeeccCCCCCEE
Confidence 5777777765 358999999998411 23566776654432 01111111 11 226789999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999975
No 110
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.91 E-value=0.0027 Score=53.65 Aligned_cols=74 Identities=19% Similarity=0.186 Sum_probs=46.7
Q ss_pred EEEEEEcCCCCCCc-----------------HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc
Q 045849 119 SFGLIGDLGQSYDS-----------------NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA 181 (320)
Q Consensus 119 ~f~~~gD~~~~~~~-----------------~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
+.++++|.|.+... ...+.++++. .+|+-+|++||+-.+-+.. ....|.....+++.+..
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~--~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKS--LRQEKEEVREFLELLDE 97 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCcc--ccccHHHHHHHHHHhcc
Confidence 67999999987431 1223444555 4999999999998654421 12233333344443333
Q ss_pred cCCeEeCCCCCcccc
Q 045849 182 YQPWIWTAGNHEIDF 196 (320)
Q Consensus 182 ~~P~~~~~GNHD~~~ 196 (320)
. -++.+.||||-..
T Consensus 98 ~-evi~i~GNHD~~i 111 (235)
T COG1407 98 R-EVIIIRGNHDNGI 111 (235)
T ss_pred C-cEEEEeccCCCcc
Confidence 2 5999999999863
No 111
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=96.80 E-value=0.026 Score=47.69 Aligned_cols=173 Identities=18% Similarity=0.171 Sum_probs=94.4
Q ss_pred eEEEEEEcCCCCCCc---HHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 118 YSFGLIGDLGQSYDS---NVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 118 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
+|++++||+=..... ..-|..+.+.. ++||+|..|-++-.+ ..-.|+.+..+++ ..+- +.+.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky-k~dfvI~N~ENaa~G-----~Git~k~y~~l~~---~G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY-KIDFVIVNGENAAGG-----FGITEKIYKELLE---AGAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh-cCcEEEEcCccccCC-----cCCCHHHHHHHHH---hCCC-EEecccccc
Confidence 589999999554332 22344555553 899999999998542 2234555555443 3444 458999988
Q ss_pred ccCCCCCCcccCcccceeeeCCCCCCC-CCCCcEEEEEeCcEEEEEEcccCC--CC-CChHHHHHHHHhcccCCCCCCCE
Q 045849 195 DFYPEIGETVPFKPYSHRYHVPYRASG-STAPFWYSIKRASVYIIVLSSYSA--YG-KYTPQYKWLEEELPKVNRSETPW 270 (320)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~f~~p~~~~~-~~~~~~ys~~~g~v~fi~lds~~~--~~-~~~~q~~WL~~~L~~~~~~~~~~ 270 (320)
.... ...+..-..++--|.|-+. ..+..|+.|...+..+.+++-... .. ..+.-..=+++.|.+.+ .+.+.
T Consensus 71 d~~e----i~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQKE----ILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cchH----HHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 5211 0011111222333443222 234456777777776666654221 11 12233444556665543 34567
Q ss_pred EEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 271 LIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
+||-+|.-..+... +| -++-+..|.+|+-=|+|.-
T Consensus 146 iiVDFHAEtTSEK~-----------a~-g~yldGrvsavvGTHTHV~ 180 (266)
T COG1692 146 IIVDFHAETTSEKN-----------AF-GWYLDGRVSAVVGTHTHVP 180 (266)
T ss_pred EEEEccccchhhhh-----------hh-heEEcCeEEEEEeccCccc
Confidence 89999964433211 11 1112446889999999963
No 112
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.74 E-value=0.0044 Score=57.78 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=33.7
Q ss_pred CCCeEEEEEEcCCCCCC---------cHHHHHH---HHhCCCCCceEEEcccccccCC
Q 045849 115 DVPYSFGLIGDLGQSYD---------SNVTLTH---YERNPRKGQTLLFVGDLSYADN 160 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~---------~~~~l~~---~~~~~~~~d~vl~~GD~~~~~~ 160 (320)
...+||++..|.|.++. +..++.. +++. .+.||||.+||+.-++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e-~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQE-NDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHh-cCCcEEEecCcccccCC
Confidence 46899999999998753 3445544 3333 49999999999997754
No 113
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=96.65 E-value=0.004 Score=55.76 Aligned_cols=67 Identities=19% Similarity=0.156 Sum_probs=39.0
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhC---CCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERN---PRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHE 193 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~---~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD 193 (320)
++.++||+|..... +.++.+. +...+-+|++||+++.+.. ..+.+ ..+-.+. ..--++.+.||||
T Consensus 52 ~~~vvGDiHG~~~d---L~~il~~~g~~~~~~~~lFLGDyVDRG~~------s~Evl-~ll~~lk~~~p~~v~llRGNHE 121 (321)
T cd07420 52 QVTICGDLHGKLDD---LFLIFYKNGLPSPENPYVFNGDFVDRGKR------SIEIL-IILFAFFLVYPNEVHLNRGNHE 121 (321)
T ss_pred CeEEEEeCCCCHHH---HHHHHHHcCCCCccceEEEeccccCCCCC------cHHHH-HHHHHHhhcCCCcEEEecCchh
Confidence 57899999976433 3333332 1123679999999976431 11222 1222221 2234888999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 122 ~~ 123 (321)
T cd07420 122 DH 123 (321)
T ss_pred hh
Confidence 85
No 114
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=96.62 E-value=0.054 Score=46.98 Aligned_cols=61 Identities=15% Similarity=0.195 Sum_probs=40.1
Q ss_pred HHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 252 QYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 252 q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
+.+.+++++++++ .+.+++||+.|--.-... .-....+ .+...+-+.|+|+|+.+|.|..+
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~----~p~~~q~-~~a~~lidaGaDiIiG~HpHv~q 229 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN----YPTPEQR-ELARALIDAGADIIIGHHPHVIQ 229 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC----CCCHHHH-HHHHHHHHcCCCEEEeCCCCccc
Confidence 3477888887765 578899999997421111 1122334 34444445899999999999865
No 115
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=96.35 E-value=0.015 Score=56.87 Aligned_cols=93 Identities=22% Similarity=0.303 Sum_probs=57.1
Q ss_pred ccCCCCCCCCccEEEE-eeCCCCCcEEEEEEeCCCCCCCeEEEe----ccCCCCceEEEEEEEEEEeccccceEEEEEEe
Q 045849 8 FQVPPGYNAPQQVHIT-QGDLVGKAVIVSWVTVDEPGTNTVVYW----SENSEQKEQAEGKVYTYKYYNYTSGYIHHCTI 82 (320)
Q Consensus 8 ~~~~~~~~~p~~v~l~-~~~~~~~~~~v~W~t~~~~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (320)
..++-+..+|..|-.. ......+|++++|.-++.+......|. ++.... .+. ++. ..-...|+|
T Consensus 434 vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e-~~~----~~~------~t~~~~~ti 502 (996)
T KOG0196|consen 434 VNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE-RSY----STL------KTKTTTATI 502 (996)
T ss_pred EEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccc-cce----eEE------ecccceEEe
Confidence 3444455666654332 334456899999999876654444443 332110 000 000 112336899
Q ss_pred cCCCCCCEEEEEeCc------CCceeeEEEECCCC
Q 045849 83 RHLEFNTKYYYVVGI------GHTERQFWFVTPPE 111 (320)
Q Consensus 83 ~~L~p~t~Y~Y~v~~------~~~s~~~~F~t~p~ 111 (320)
+||+|||.|.++|.. |..|....|.|.+.
T Consensus 503 ~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 503 TGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred eccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 999999999999964 35688899999875
No 116
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=96.34 E-value=0.0075 Score=53.81 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=39.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc--cCCeEeCCCCCcc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA--YQPWIWTAGNHEI 194 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~ 194 (320)
+++++||+|..... +.++.+.. ...+-++++||+++.+.. ..+.+ ..+..+.. ..-++.+.||||.
T Consensus 44 ~i~ViGDIHG~~~d---L~~l~~~~g~~~~~~ylFLGDyVDRG~~------s~Evi-~lL~~lki~~p~~v~lLRGNHE~ 113 (305)
T cd07416 44 PVTVCGDIHGQFYD---LLKLFEVGGSPANTRYLFLGDYVDRGYF------SIECV-LYLWALKILYPKTLFLLRGNHEC 113 (305)
T ss_pred CEEEEEeCCCCHHH---HHHHHHhcCCCCCceEEEECCccCCCCC------hHHHH-HHHHHHHhhcCCCEEEEeCCCcH
Confidence 58899999976433 33333221 144789999999975421 11121 22222222 2357889999998
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 114 ~ 114 (305)
T cd07416 114 R 114 (305)
T ss_pred H
Confidence 5
No 117
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.27 E-value=0.014 Score=54.01 Aligned_cols=81 Identities=14% Similarity=0.200 Sum_probs=53.9
Q ss_pred CCCeEEEEEEcCCCCCCcH--HHHHH---HHhC----CCCCceEEEcccccccCCCCCC-C--------ChhhhhHHHHH
Q 045849 115 DVPYSFGLIGDLGQSYDSN--VTLTH---YERN----PRKGQTLLFVGDLSYADNYPCH-D--------NNRWDTWGRFV 176 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~--~~l~~---~~~~----~~~~d~vl~~GD~~~~~~~~~~-~--------~~~~~~~~~~~ 176 (320)
...+++++++|.|.+.... ..+.. ++.- ..+...++++||.++.-+.... + ..+++++.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 4678999999999865321 11222 2221 1245789999999985443221 1 23566677777
Q ss_pred hhhhccCCeEeCCCCCccc
Q 045849 177 ERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 177 ~~~~~~~P~~~~~GNHD~~ 195 (320)
..+...+-++..|||||..
T Consensus 303 ~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred hhCCCCceEEEecCCCCcc
Confidence 7777788899999999985
No 118
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.25 E-value=0.12 Score=44.34 Aligned_cols=169 Identities=17% Similarity=0.138 Sum_probs=78.1
Q ss_pred EEEEcCCCCCC---cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccccC
Q 045849 121 GLIGDLGQSYD---SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFY 197 (320)
Q Consensus 121 ~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~ 197 (320)
+++||.=.... ....|.++.+. .++||||..|.++..+. .-..+.+.++++ ..+- ..+.|||=+...
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~-~~~DfVIaNgENaa~G~-----Git~~~~~~L~~---~GvD-viT~GNH~wdkk 70 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEE-YGIDFVIANGENAAGGF-----GITPKIAEELFK---AGVD-VITMGNHIWDKK 70 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG---G-SEEEEE-TTTTTTS-----S--HHHHHHHHH---HT-S-EEE--TTTTSST
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhh-cCCCEEEECCcccCCCC-----CCCHHHHHHHHh---cCCC-EEecCcccccCc
Confidence 35778743221 12335556666 39999999999985422 112222332222 3444 348999998532
Q ss_pred CCCCCcccCcccceeeeCCCCCCC-CCCCcEEEEEeCcEEEEEEcccCC--CCCChHHHHHHHHhcccCCCCCCCEEEEE
Q 045849 198 PEIGETVPFKPYSHRYHVPYRASG-STAPFWYSIKRASVYIIVLSSYSA--YGKYTPQYKWLEEELPKVNRSETPWLIVL 274 (320)
Q Consensus 198 ~~~~~~~~~~~~~~~f~~p~~~~~-~~~~~~ys~~~g~v~fi~lds~~~--~~~~~~q~~WL~~~L~~~~~~~~~~~iv~ 274 (320)
+...+-.-..+.--|.|-+. ..+..|..++.++..+.+++-... ......-+.-+++.|++. +.+.+.+||=
T Consensus 71 ----ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVD 145 (253)
T PF13277_consen 71 ----EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVD 145 (253)
T ss_dssp ----THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEE
T ss_pred ----HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEE
Confidence 11011111122223444332 234568889999888888775322 111223333344444442 2467789998
Q ss_pred ecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 275 MHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 275 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
+|--..+ .. .-.-.+-.-+|.+|+-=|+|.
T Consensus 146 FHAEaTS-----------EK-~A~g~~lDGrvsaV~GTHTHV 175 (253)
T PF13277_consen 146 FHAEATS-----------EK-QAMGWYLDGRVSAVVGTHTHV 175 (253)
T ss_dssp EE-S-HH-----------HH-HHHHHHHBTTBSEEEEESSSS
T ss_pred eecCcHH-----------HH-HHHHHHhCCcEEEEEeCCCCc
Confidence 9942211 11 222344467899999999996
No 119
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=96.23 E-value=0.0094 Score=54.37 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=38.4
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC--CCC-ceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP--RKG-QTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHE 193 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~--~~~-d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD 193 (320)
++.++||+|..... +..+.+.. ... +.+|++||+++.+.. ..+. ...+..+. ...-++.+.||||
T Consensus 67 ~i~VvGDIHG~~~d---L~~ll~~~g~~~~~~~ylFLGDyVDRGp~------SlEv-l~lL~~lki~~p~~v~lLRGNHE 136 (377)
T cd07418 67 EVVVVGDVHGQLHD---VLFLLEDAGFPDQNRFYVFNGDYVDRGAW------GLET-FLLLLSWKVLLPDRVYLLRGNHE 136 (377)
T ss_pred CEEEEEecCCCHHH---HHHHHHHhCCCCCCceEEEeccccCCCCC------hHHH-HHHHHHHhhccCCeEEEEeeecc
Confidence 58999999976533 33333321 122 458999999965421 1111 22222222 2234889999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 137 ~~ 138 (377)
T cd07418 137 SK 138 (377)
T ss_pred cc
Confidence 85
No 120
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=96.22 E-value=0.01 Score=52.13 Aligned_cols=68 Identities=15% Similarity=0.187 Sum_probs=39.4
Q ss_pred EEEEEEcCCCCCCcHH-HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh--hccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNV-TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS--AAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~~ 195 (320)
+++++||+|....... .++.. .. ...+-++++||+++.+.. ..+. ...+..+ .....++.+.||||..
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~-~~-~~~~~~vfLGD~VDrG~~------s~e~-l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLN-GP-PPDTNYVFLGDYVDRGPF------SIEV-ILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHc-CC-CCCceEEEeCCccCCCCC------hHHH-HHHHHHHHhcCCCCEEEEeccccHH
Confidence 5899999997643322 22222 22 256789999999975431 1111 1222222 2233578999999985
No 121
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=96.00 E-value=0.012 Score=52.06 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=38.7
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 195 (320)
.+.++||+|........+-..... ...+-+|++||+++.+.. ..+. ...+..+. ....++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~-~~~~~~lfLGDyVDRG~~------s~ev-l~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGD-PPDTNYLFLGDYVDRGYY------SVET-FLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCC-CCCCeEEEEeEECCCCcC------HHHH-HHHHHHHhhcCCCcEEEEecccchH
Confidence 478899999754332211111122 244678899999975321 1111 12222222 234589999999974
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=95.94 E-value=0.014 Score=51.80 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=38.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 195 (320)
.++++||+|........+-..... ...+-+|++||+++.+.. ..+.+ ..+..+. ....++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~-~~~~~~lfLGDyVDRG~~------s~e~i-~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGF-PPESNYLFLGDYVDRGKQ------SLETI-CLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCC-CCcceEEEEeeEecCCCC------cHHHH-HHHHHhhhhCCCcEEEEecccchh
Confidence 478899999754332222111122 244678899999975431 11221 1121221 223478899999985
No 123
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=95.90 E-value=0.095 Score=49.87 Aligned_cols=55 Identities=18% Similarity=0.292 Sum_probs=36.9
Q ss_pred HHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHH-HHHHHHHhC-CCcE-EEecCcccc
Q 045849 251 PQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRV-MYEPWLVKY-KVDV-VFAGHVHAY 317 (320)
Q Consensus 251 ~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~-~l~~l~~~~-~v~l-vl~GH~H~y 317 (320)
.|.+|-...++. .+.+-+|++.|.|.-.... ++ .+..+...+ ++++ ||-||.|..
T Consensus 212 ~~~~~~~~m~~~---~~idlii~lgH~~~~~~~e---------~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 212 TQSEWEQDMVNT---TDIDLIIALGHSPVRDDDE---------WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred hccchHHHHhhc---cCccEEEEecccccccchh---------hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 467888888777 5677788999988744221 12 333344444 6778 999999964
No 124
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=95.63 E-value=0.022 Score=50.71 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=37.9
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC--CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc--cCCeEeCCCCCcc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP--RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA--YQPWIWTAGNHEI 194 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~--~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~ 194 (320)
.+.++||+|..... +.++.+.. ...+-+|++||+++.+.. ..+.+ ..+-.+.. ..-++.+.||||.
T Consensus 44 ~i~vvGDIHG~~~~---L~~l~~~~~~~~~~~~lfLGDyVDRG~~------s~evl-~ll~~lk~~~p~~v~llrGNHE~ 113 (303)
T PTZ00239 44 PVNVCGDIHGQFYD---LQALFKEGGDIPNANYIFIGDFVDRGYN------SVETM-EYLLCLKVKYPGNITLLRGNHES 113 (303)
T ss_pred CEEEEEeCCCCHHH---HHHHHHhcCCCCCceEEEeeeEcCCCCC------HHHHH-HHHHHhhhcCCCcEEEEecccch
Confidence 37889999975433 23222211 134678999999976421 11111 12222222 2347899999997
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 114 ~ 114 (303)
T PTZ00239 114 R 114 (303)
T ss_pred H
Confidence 4
No 125
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=95.61 E-value=0.023 Score=50.95 Aligned_cols=67 Identities=18% Similarity=0.176 Sum_probs=38.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCC---CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh--hccCCeEeCCCCCc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS--AAYQPWIWTAGNHE 193 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD 193 (320)
++.++||+|.... .+.++.+.. ..-|-+|++||+++.+.. ..+.+. .+-.+ ....-++.+.||||
T Consensus 61 ~~~VvGDIHG~~~---dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~------S~Evl~-ll~~lki~~p~~v~lLRGNHE 130 (316)
T cd07417 61 KITVCGDTHGQFY---DLLNIFELNGLPSETNPYLFNGDFVDRGSF------SVEVIL-TLFAFKLLYPNHFHLNRGNHE 130 (316)
T ss_pred eeEEeecccCCHH---HHHHHHHhcCCCCccCeEEEEeeEecCCCC------hHHHHH-HHHHhhhccCCceEEEeeccc
Confidence 6899999997543 333333321 123579999999976431 112221 11122 12334788999999
Q ss_pred cc
Q 045849 194 ID 195 (320)
Q Consensus 194 ~~ 195 (320)
..
T Consensus 131 ~~ 132 (316)
T cd07417 131 TD 132 (316)
T ss_pred hH
Confidence 74
No 126
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=95.60 E-value=0.023 Score=50.82 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=38.2
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhc--cCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAA--YQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 195 (320)
+++++||+|........+-..... ...+-+|++||+++.+.. ..+.+ ..+..+.. ...++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~-~~~~~ylfLGDyVDRG~~------s~evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGY-PPESNYLFLGDYVDRGKQ------SLETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCC-CCcceEEEeceecCCCCC------cHHHH-HHHHHhcccCCCceEEEecccchh
Confidence 488899999754332211111122 144678899999975421 11222 12222222 23578999999985
No 127
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=95.27 E-value=0.77 Score=39.71 Aligned_cols=70 Identities=20% Similarity=0.165 Sum_probs=41.5
Q ss_pred CCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 115 DVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
....+|+.++|+|...... ... ..-|+++++||...-+ .......|.+.+..+. ..=-+++.||||.
T Consensus 59 ~~~~r~VcisdtH~~~~~i------~~~-p~gDvlihagdfT~~g-----~~~ev~~fn~~~gslp-h~yKIVIaGNHEL 125 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDI------NDI-PDGDVLIHAGDFTNLG-----LPEEVIKFNEWLGSLP-HEYKIVIAGNHEL 125 (305)
T ss_pred CCceEEEEecCcccccCcc------ccC-CCCceEEeccCCcccc-----CHHHHHhhhHHhccCc-ceeeEEEeeccce
Confidence 3578999999998643321 122 3779999999998421 1111223333332221 1124678999999
Q ss_pred ccC
Q 045849 195 DFY 197 (320)
Q Consensus 195 ~~~ 197 (320)
..+
T Consensus 126 tFd 128 (305)
T KOG3947|consen 126 TFD 128 (305)
T ss_pred eec
Confidence 754
No 128
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=94.87 E-value=0.27 Score=33.97 Aligned_cols=70 Identities=21% Similarity=0.337 Sum_probs=39.2
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCC----CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEP----GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKY 91 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y 91 (320)
.|..+.+.... .+++.|.|...... ..-.|.|........... .. ...-...+.|.+|.|++.|
T Consensus 3 ~p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~-------~~---~~~~~~~~~i~~l~p~~~Y 70 (93)
T cd00063 3 PPTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEV-------EV---TPGSETSYTLTGLKPGTEY 70 (93)
T ss_pred CCCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEEe-------ec---cCCcccEEEEccccCCCEE
Confidence 45445444443 58999999886432 123444443321111111 00 0013456789999999999
Q ss_pred EEEeCc
Q 045849 92 YYVVGI 97 (320)
Q Consensus 92 ~Y~v~~ 97 (320)
.++|..
T Consensus 71 ~~~v~a 76 (93)
T cd00063 71 EFRVRA 76 (93)
T ss_pred EEEEEE
Confidence 999954
No 129
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=94.82 E-value=0.065 Score=48.04 Aligned_cols=21 Identities=10% Similarity=0.181 Sum_probs=18.9
Q ss_pred HHHHHHHHHhCCCcEEEecCc
Q 045849 294 RVMYEPWLVKYKVDVVFAGHV 314 (320)
Q Consensus 294 ~~~l~~l~~~~~v~lvl~GH~ 314 (320)
.+++...+++.++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999997
No 130
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=94.65 E-value=0.035 Score=49.24 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=37.3
Q ss_pred EEEEEcCCCCCCcHH-HHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHH-hhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNV-TLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFV-ERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~GNHD~~ 195 (320)
+.++||+|....... .++.+ .. ...+-+|++||+++.+.. ..+.+.-.+ -.+.....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~-~~-~~~~~~lfLGDyVDRG~~------s~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKC-GF-PPYSNYLFLGDYVDRGKH------SVETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHc-CC-CCcccEEEeeeEecCCCC------HHHHHHHHHHHhhccCCeEEEEecccchH
Confidence 678999997643322 22222 22 134567789999976421 111211111 1122334689999999974
No 131
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=94.62 E-value=0.09 Score=53.90 Aligned_cols=79 Identities=22% Similarity=0.300 Sum_probs=47.7
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCCCCC--C----eEEEeccCCCC---ceEEEEEEEEEEeccccceEEEEEEecCCC
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDEPGT--N----TVVYWSENSEQ---KEQAEGKVYTYKYYNYTSGYIHHCTIRHLE 86 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~~~~--~----~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 86 (320)
.|+.|.|...+ +++++|.|........ . .++|++..... +..+.| ....-.+.+|+
T Consensus 618 PP~Nl~lev~s--StsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~-------------n~~~~l~~~Le 682 (1381)
T KOG4221|consen 618 PPQNLSLEVVS--STSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKG-------------NTTQYLFNGLE 682 (1381)
T ss_pred CCcceEEEecC--CCeEEEEccCCCcccccceEEEEEEEecccCcccccceeeccc-------------chhhhHhhcCC
Confidence 45558777765 7899999999853321 2 33444333211 111111 11123467899
Q ss_pred CCCEEEEEeCc------CCceeeEEEECC
Q 045849 87 FNTKYYYVVGI------GHTERQFWFVTP 109 (320)
Q Consensus 87 p~t~Y~Y~v~~------~~~s~~~~F~t~ 109 (320)
|+|.|.+||.. |..|++.++.|+
T Consensus 683 p~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 683 PNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred CCceEEEEEEEeccCCCCCcccceeccCc
Confidence 99999999954 346778888875
No 132
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=93.61 E-value=0.74 Score=30.62 Aligned_cols=71 Identities=23% Similarity=0.286 Sum_probs=39.6
Q ss_pred CccEEEEeeCCCCCcEEEEEEeCCCCC--CCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEE
Q 045849 17 PQQVHITQGDLVGKAVIVSWVTVDEPG--TNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYV 94 (320)
Q Consensus 17 p~~v~l~~~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~ 94 (320)
|..+++.... .+++.|+|....... ...+.|........ ........ ........|.+|+|++.|.++
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~i~~L~~~~~Y~v~ 73 (83)
T smart00060 4 PSNLRVTDVT--STSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWKEVNV------TPSSTSYTLTGLKPGTEYEFR 73 (83)
T ss_pred CCcEEEEEEe--CCEEEEEECCCCCCCCCccEEEEEEEEecCC--CccEEEEe------cCCccEEEEeCcCCCCEEEEE
Confidence 4446666544 348999998543221 24556654432211 00111110 011457889999999999999
Q ss_pred eCc
Q 045849 95 VGI 97 (320)
Q Consensus 95 v~~ 97 (320)
|..
T Consensus 74 v~a 76 (83)
T smart00060 74 VRA 76 (83)
T ss_pred EEE
Confidence 854
No 133
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=91.84 E-value=0.12 Score=43.34 Aligned_cols=77 Identities=12% Similarity=0.017 Sum_probs=42.0
Q ss_pred EEEEEcCCCCCC--cHHHHHHHHhCC---CCCceEEEcccccccCCCCCC-------CCh---hhhhHHHHHhhhhccCC
Q 045849 120 FGLIGDLGQSYD--SNVTLTHYERNP---RKGQTLLFVGDLSYADNYPCH-------DNN---RWDTWGRFVERSAAYQP 184 (320)
Q Consensus 120 f~~~gD~~~~~~--~~~~l~~~~~~~---~~~d~vl~~GD~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~P 184 (320)
|++++|.+.+.. ....|.++.+.. .+|+.+|++|+.+........ ... ....+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 678999988743 234555555421 379999999999975321100 000 00112233444567889
Q ss_pred eEeCCCCCcccc
Q 045849 185 WIWTAGNHEIDF 196 (320)
Q Consensus 185 ~~~~~GNHD~~~ 196 (320)
++.+||+||...
T Consensus 81 vvlvPg~~D~~~ 92 (209)
T PF04042_consen 81 VVLVPGPNDPTS 92 (209)
T ss_dssp EEEE--TTCTT-
T ss_pred EEEeCCCccccc
Confidence 999999999853
No 134
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=88.52 E-value=3.3 Score=42.71 Aligned_cols=72 Identities=25% Similarity=0.352 Sum_probs=45.9
Q ss_pred CCCccEEEEeeCCCCCcEEEEEEeCC----CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCE
Q 045849 15 NAPQQVHITQGDLVGKAVIVSWVTVD----EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTK 90 (320)
Q Consensus 15 ~~p~~v~l~~~~~~~~~~~v~W~t~~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~ 90 (320)
.+|..+.+...+ ++++.|+|.... ......|+|+...+.. +...... ...-.-.+.|+||+|+|.
T Consensus 821 ~ap~~~~~~~~s--~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~-----~~~~~~~----i~~~~~~~~ltgL~~~T~ 889 (1051)
T KOG3513|consen 821 VAPTKLSAKPLS--SSEVNLSWKPPLWDNGKLTGYEVKYWKINEKE-----GSLSRVQ----IAGNRTSWRLTGLEPNTK 889 (1051)
T ss_pred CCCccceeeccc--CceEEEEecCcCccCCccceeEEEEEEcCCCc-----cccccee----ecCCcceEeeeCCCCCce
Confidence 467777766554 589999995442 2245789999876643 1111000 012233578999999999
Q ss_pred EEEEeCc
Q 045849 91 YYYVVGI 97 (320)
Q Consensus 91 Y~Y~v~~ 97 (320)
|++.|..
T Consensus 890 Y~~~vrA 896 (1051)
T KOG3513|consen 890 YRFYVRA 896 (1051)
T ss_pred EEEEEEE
Confidence 9999964
No 135
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=85.40 E-value=1.6 Score=37.22 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=36.9
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHh-hhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVE-RSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~~~GNHD~~ 195 (320)
+.+.||+|......-.+-++-....+ .=-|++||+|+.+- ...+.|.-.+- ++.-.-.+..+.||||..
T Consensus 45 vtvcGDIHGQf~Dllelf~igG~~~~-t~YLFLGDyVDRG~------~SvEt~lLLl~lK~rYP~ritLiRGNHEsR 114 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFRIGGDVPE-TNYLFLGDYVDRGY------YSVETFLLLLALKVRYPDRITLIRGNHESR 114 (303)
T ss_pred cEEeecccchHHHHHHHHHhCCCCCC-CceEeecchhcccc------chHHHHHHHHHHhhcCcceeEEeeccchhh
Confidence 46689999764332222222222212 23568999997632 12344432221 122234477899999985
No 136
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=82.96 E-value=1.6 Score=39.49 Aligned_cols=68 Identities=19% Similarity=0.241 Sum_probs=37.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHh-CCCCCceEEEcccccccCCCCCCCChhhhhH--HHHHhhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYER-NPRKGQTLLFVGDLSYADNYPCHDNNRWDTW--GRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~-~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
+.++||+|........+-.... .+ .-.-.+++||+++.+... .+.. .-.+ ++.-.--++...||||..
T Consensus 61 V~i~GDiHGq~~DLlrlf~~~g~~p-p~~~ylFLGDYVDRG~~s------lE~i~LL~a~-Ki~yp~~~~lLRGNHE~~ 131 (331)
T KOG0374|consen 61 VKIVGDIHGQFGDLLRLFDLLGSFP-PDQNYVFLGDYVDRGKQS------LETICLLFAL-KIKYPENVFLLRGNHECA 131 (331)
T ss_pred EEEEccCcCCHHHHHHHHHhcCCCC-CcccEEEecccccCCccc------eEEeehhhhh-hhhCCceEEEeccccccc
Confidence 6778999987653222222222 21 223578899999764321 1111 1111 112334589999999986
No 137
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=82.46 E-value=11 Score=39.49 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=52.4
Q ss_pred EEeeCCCCCcEEEEEEeCCCCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCCCCCEEEEEeCc----
Q 045849 22 ITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLEFNTKYYYVVGI---- 97 (320)
Q Consensus 22 l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~Y~v~~---- 97 (320)
|....-...++.|.|.....+..+...|..--... -.+.-..+ +.-.++.+|.||+|.|.|.|||..
T Consensus 527 ~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~---~~~~~~~~------~~n~~e~ti~gL~k~TeY~~~vvA~N~~ 597 (1381)
T KOG4221|consen 527 LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSED---DTGKELRV------ENNATEYTINGLEKYTEYSIRVVAYNSA 597 (1381)
T ss_pred ccccccCcceEEEEecCCCCCCCCceEEEEEEEcC---CCCceEEE------ecCccEEEeecCCCccceEEEEEEecCC
Confidence 44444446889999999864444444444311000 00111111 122446779999999999999964
Q ss_pred --CCceeeEEEECCCCCC--CCCCeEEEEEEcC
Q 045849 98 --GHTERQFWFVTPPEVG--PDVPYSFGLIGDL 126 (320)
Q Consensus 98 --~~~s~~~~F~t~p~~~--~~~~~~f~~~gD~ 126 (320)
+..|...+|+|+.... +...++..+.+-.
T Consensus 598 G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sSt 630 (1381)
T KOG4221|consen 598 GSGVSSADITVRTLSDVPSAPPQNLSLEVVSST 630 (1381)
T ss_pred CCCCCCCceEEEeccCCCCCCCcceEEEecCCC
Confidence 2356677777753211 1134555554443
No 138
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=74.68 E-value=4.7 Score=34.70 Aligned_cols=67 Identities=19% Similarity=0.179 Sum_probs=34.9
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCCce-EEEcccccccCCCCCCCChhhhhHHHHHhhhh--ccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKGQT-LLFVGDLSYADNYPCHDNNRWDTWGRFVERSA--AYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~-vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 195 (320)
+.+.||.|......-.+-++-.. .||. .++.||.+..+-. + .+--..+-.+. -.-.+-.++||||..
T Consensus 62 vtvcGDvHGqf~dl~ELfkiGG~--~pdtnylfmGDyvdrGy~-S------vetVS~lva~Kvry~~rvtilrGNHEsr 131 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELFKIGGL--APDTNYLFMGDYVDRGYY-S------VETVSLLVALKVRYPDRVTILRGNHESR 131 (319)
T ss_pred eEEecCcchhHHHHHHHHHccCC--CCCcceeeeeeecccccc-h------HHHHHHHHHhhccccceeEEecCchHHH
Confidence 56789999764322222222222 3443 5679999975321 1 11111121111 123467799999975
No 139
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=71.78 E-value=22 Score=31.41 Aligned_cols=80 Identities=9% Similarity=-0.089 Sum_probs=45.7
Q ss_pred CCeEEEEEEcCCCCCC-cHHHHHHHHhCC-------CCCceEEEcccccccCCCCC-CCChhhhhHHHHHh--------h
Q 045849 116 VPYSFGLIGDLGQSYD-SNVTLTHYERNP-------RKGQTLLFVGDLSYADNYPC-HDNNRWDTWGRFVE--------R 178 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~-~~~~l~~~~~~~-------~~~d~vl~~GD~~~~~~~~~-~~~~~~~~~~~~~~--------~ 178 (320)
...+|+++||.+.... ....|+++.+.. ..|-.+|+.|+.+...-... .....+.+.++.+. .
T Consensus 26 ~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~ 105 (291)
T PTZ00235 26 KRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKL 105 (291)
T ss_pred CceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChH
Confidence 4678999999998753 223333332211 23889999999986521100 01111222222221 2
Q ss_pred hhccCCeEeCCCCCccc
Q 045849 179 SAAYQPWIWTAGNHEID 195 (320)
Q Consensus 179 ~~~~~P~~~~~GNHD~~ 195 (320)
+..+.-++.|||-.|-.
T Consensus 106 L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 106 ILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHhcCeEEEECCCCCCC
Confidence 35667899999999974
No 140
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=71.32 E-value=7.9 Score=32.48 Aligned_cols=66 Identities=23% Similarity=0.285 Sum_probs=35.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCC-CCCce-EEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC--eEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNP-RKGQT-LLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP--WIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~-~~~d~-vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~~ 195 (320)
+-+.||+|.... . |.++-+.. .-||- -|++||.++.+- ...+.|.-++ -+....| +-...||||..
T Consensus 48 VTvCGDIHGQFy--D-L~eLFrtgG~vP~tnYiFmGDfVDRGy------ySLEtfT~l~-~LkaryP~~ITLlRGNHEsR 117 (306)
T KOG0373|consen 48 VTVCGDIHGQFY--D-LLELFRTGGQVPDTNYIFMGDFVDRGY------YSLETFTLLL-LLKARYPAKITLLRGNHESR 117 (306)
T ss_pred eeEeeccchhHH--H-HHHHHHhcCCCCCcceEEecccccccc------ccHHHHHHHH-HHhhcCCceeEEeeccchhh
Confidence 456899997542 2 22232221 12332 567999997632 1234443222 2333333 66789999985
No 141
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=70.68 E-value=19 Score=32.04 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=15.1
Q ss_pred EEEecCCCCCCEEEEEeC
Q 045849 79 HCTIRHLEFNTKYYYVVG 96 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~ 96 (320)
..+|.+|+|+|+||+-|-
T Consensus 16 ~~t~~~L~p~t~YyfdVF 33 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVF 33 (300)
T ss_pred eEEeccCCCCCeEEEEEE
Confidence 356889999999999984
No 142
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=70.03 E-value=4.7 Score=31.59 Aligned_cols=23 Identities=26% Similarity=0.536 Sum_probs=19.4
Q ss_pred HHHHHHHhCCCcEEEecCccccc
Q 045849 296 MYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 296 ~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
.|.-|-++.+||+.+.||+|.++
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~ 120 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFE 120 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEE
Confidence 56667778899999999999865
No 143
>PRK09453 phosphodiesterase; Provisional
Probab=68.17 E-value=5 Score=32.71 Aligned_cols=14 Identities=36% Similarity=0.442 Sum_probs=12.0
Q ss_pred hCCCcEEEecCccc
Q 045849 303 KYKVDVVFAGHVHA 316 (320)
Q Consensus 303 ~~~v~lvl~GH~H~ 316 (320)
..++|++++||+|.
T Consensus 116 ~~~~d~vi~GHtH~ 129 (182)
T PRK09453 116 LHDGDVLVYGHTHI 129 (182)
T ss_pred ccCCCEEEECCCCC
Confidence 45689999999996
No 144
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=67.31 E-value=34 Score=35.69 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=49.5
Q ss_pred cccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEEEeccC----CCCceEEEEEEEEEEeccccceEEEEEEe
Q 045849 7 VFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSEN----SEQKEQAEGKVYTYKYYNYTSGYIHHCTI 82 (320)
Q Consensus 7 ~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~y~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (320)
+++.|+| .|.+|++.--. .+++.|+|.-......+...|.... ...|..+. +... ...+- +.+++
T Consensus 610 ~V~gpPg--pP~~v~~~~i~--~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~-~vp~-----~~~~~-~sa~v 678 (1051)
T KOG3513|consen 610 LVRGPPG--PPPDVHVDDIS--DTTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVT-TVPG-----NITGD-ESATV 678 (1051)
T ss_pred EEecCCC--CCCceeEeeec--cceEEEEeecCCCCCCCceEEeEEecCCCCCcceEee-ECCC-----cccCc-cceeE
Confidence 3455554 67778776444 4789999998764444555555433 22344443 2111 11222 55888
Q ss_pred cCCCCCCEEEEEeCc
Q 045849 83 RHLEFNTKYYYVVGI 97 (320)
Q Consensus 83 ~~L~p~t~Y~Y~v~~ 97 (320)
-+|.|-..|.+||..
T Consensus 679 v~L~Pwv~YeFRV~A 693 (1051)
T KOG3513|consen 679 VNLSPWVEYEFRVVA 693 (1051)
T ss_pred EccCCCcceEEEEEE
Confidence 999999999999965
No 145
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=59.88 E-value=5.1 Score=38.91 Aligned_cols=50 Identities=26% Similarity=0.365 Sum_probs=31.2
Q ss_pred HHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcccc
Q 045849 136 LTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDF 196 (320)
Q Consensus 136 l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 196 (320)
+..+++.. -.|-+=++||+.+.+..+ + ..|+.|...--+=.-|||||.-|
T Consensus 176 l~~lIqrL-~VDhLHIvGDIyDRGp~p-------d---~ImD~Lm~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 176 LSELIQRL-AVDHLHIVGDIYDRGPRP-------D---KIMDRLMNYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHHHH-hhhheeecccccCCCCCh-------h---HHHHHHhcCCCccccccchHHHH
Confidence 44455553 778899999999764321 2 23444434334556799999854
No 146
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=58.95 E-value=38 Score=34.44 Aligned_cols=110 Identities=12% Similarity=0.171 Sum_probs=66.0
Q ss_pred CccEEEEeeCCCCCcEEEEEEeCCCCC-----CCeEEEeccCCCCceEEEEE----EEEEE-----eccc-cceEEE-EE
Q 045849 17 PQQVHITQGDLVGKAVIVSWVTVDEPG-----TNTVVYWSENSEQKEQAEGK----VYTYK-----YYNY-TSGYIH-HC 80 (320)
Q Consensus 17 p~~v~l~~~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~----~~~~~-----~~~~-~~~~~~-~~ 80 (320)
+.-++++......+++.++|..-..+. .-.+.|.+.+...-....|. ...+. ..+. .+.-.| ..
T Consensus 489 ~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~ 568 (1025)
T KOG4258|consen 489 DLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGF 568 (1025)
T ss_pred cceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccce
Confidence 455677777667899999999875331 23556666553211111111 01111 0111 112344 68
Q ss_pred EecCCCCCCEEEEEeCcC----------CceeeEEEECCCCCCCCCCeEEEEEEcCC
Q 045849 81 TIRHLEFNTKYYYVVGIG----------HTERQFWFVTPPEVGPDVPYSFGLIGDLG 127 (320)
Q Consensus 81 ~l~~L~p~t~Y~Y~v~~~----------~~s~~~~F~t~p~~~~~~~~~f~~~gD~~ 127 (320)
.+.||+|.|.|-|-|..- ..|+..-++|.|.. +.-++.++..++.-
T Consensus 569 ~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~-PspPl~~ls~snsS 624 (1025)
T KOG4258|consen 569 LLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDI-PSPPLDVLSKSNSS 624 (1025)
T ss_pred ehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCC-CCCcchhhhccCcc
Confidence 899999999999988642 46888899998754 34566676666653
No 147
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=58.83 E-value=16 Score=34.28 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=41.8
Q ss_pred CeEEEEEEcCCCCCC-cHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCC
Q 045849 117 PYSFGLIGDLGQSYD-SNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNH 192 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~-~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 192 (320)
+.||+++||...... ..+.++++.+..+..|++|+.|+....+. ....|..+..-.. .-.+|+|+.-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~----~~~e~~~ykng~~--~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDT----QNAEVEKYKNGTK--KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCcc----chhHHHHHhcCCc--cCceeEEEecCCC
Confidence 369999999865432 12334555555456899999999985321 1233333332222 2357888776665
No 148
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=56.88 E-value=10 Score=34.30 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=34.7
Q ss_pred EEEEEcCCCCCCcHHHHHHHHhCCCCC--ceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 120 FGLIGDLGQSYDSNVTLTHYERNPRKG--QTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 120 f~~~gD~~~~~~~~~~l~~~~~~~~~~--d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
|-+.||+|...- . |.++-+--+.| ---+++||.|+.+-.. -+ -..-.| .+ ++.-..-++...||||-.
T Consensus 90 iTVCGDIHGQf~--D-LmKLFEVGG~PA~t~YLFLGDYVDRGyFS-iE-CvlYLw--sL-Ki~yp~tl~lLRGNHECr 159 (517)
T KOG0375|consen 90 ITVCGDIHGQFF--D-LMKLFEVGGSPANTRYLFLGDYVDRGYFS-IE-CVLYLW--SL-KINYPKTLFLLRGNHECR 159 (517)
T ss_pred eeEecccchHHH--H-HHHHHHccCCcccceeEeeccccccceee-ee-hHHHHH--HH-hcCCCCeEEEecCCcchh
Confidence 567899996532 2 22333221222 2356899999764321 11 111111 11 122234477899999964
No 149
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=56.58 E-value=64 Score=28.77 Aligned_cols=20 Identities=30% Similarity=0.365 Sum_probs=16.6
Q ss_pred EEEecCCCCCCEEEEEeCcC
Q 045849 79 HCTIRHLEFNTKYYYVVGIG 98 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~v~~~ 98 (320)
..+|.||+||+.|-..|...
T Consensus 261 tetI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 261 TETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred eeecccCCCCcEEEEEEEEe
Confidence 44799999999998888653
No 150
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=55.58 E-value=17 Score=26.46 Aligned_cols=23 Identities=17% Similarity=0.239 Sum_probs=20.0
Q ss_pred eEEEEEEecCCCCCCEEEEEeCc
Q 045849 75 GYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 75 ~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
.-+.++.+.++.+|+.|.|+|..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45778899999999999999965
No 151
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=55.42 E-value=33 Score=29.68 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=49.1
Q ss_pred CCCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcc
Q 045849 115 DVPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEI 194 (320)
Q Consensus 115 ~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 194 (320)
++..+|++.+|.+...+ ...++-+++. +|+++|+.|=.+|-.+..-. ....+.-.+.++.+....+--.++.-|=.
T Consensus 174 dg~~~i~faSDvqGp~~-~~~l~~i~e~--~P~v~ii~GPpty~lg~r~~-~~~~E~~irNl~~ii~~~~~~lViDHHll 249 (304)
T COG2248 174 DGKSSIVFASDVQGPIN-DEALEFILEK--RPDVLIIGGPPTYLLGYRVG-PKSLEKGIRNLERIIEETNATLVIDHHLL 249 (304)
T ss_pred cCCeEEEEcccccCCCc-cHHHHHHHhc--CCCEEEecCCchhHhhhhcC-hHHHHHHHHHHHHHHHhCcceEEEeehhh
Confidence 36789999999986543 4567777776 99999999999976553211 11122234445555555555556666655
Q ss_pred c
Q 045849 195 D 195 (320)
Q Consensus 195 ~ 195 (320)
.
T Consensus 250 R 250 (304)
T COG2248 250 R 250 (304)
T ss_pred c
Confidence 3
No 152
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=54.89 E-value=11 Score=32.85 Aligned_cols=24 Identities=21% Similarity=0.238 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhCCCc-EEEecCcc
Q 045849 292 TMRVMYEPWLVKYKVD-VVFAGHVH 315 (320)
Q Consensus 292 ~~~~~l~~l~~~~~v~-lvl~GH~H 315 (320)
++.+.+.+|+++++.| ||++||+=
T Consensus 140 eqp~~i~~Ll~~~~PDIlViTGHD~ 164 (283)
T TIGR02855 140 EMPEKVLDLIEEVRPDILVITGHDA 164 (283)
T ss_pred hchHHHHHHHHHhCCCEEEEeCchh
Confidence 4557889999999998 67999984
No 153
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=54.77 E-value=13 Score=32.45 Aligned_cols=24 Identities=25% Similarity=0.300 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCc-EEEecCcc
Q 045849 292 TMRVMYEPWLVKYKVD-VVFAGHVH 315 (320)
Q Consensus 292 ~~~~~l~~l~~~~~v~-lvl~GH~H 315 (320)
++.+.+..|+++++.| |||+||+=
T Consensus 141 eqp~~i~~Ll~~~~PDIlViTGHD~ 165 (287)
T PF05582_consen 141 EQPEKIYRLLEEYRPDILVITGHDG 165 (287)
T ss_pred HhhHHHHHHHHHcCCCEEEEeCchh
Confidence 4667889999999998 67999984
No 154
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=54.47 E-value=18 Score=27.16 Aligned_cols=23 Identities=26% Similarity=0.296 Sum_probs=20.2
Q ss_pred eEEEEEEecCCCCCCEEEEEeCc
Q 045849 75 GYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 75 ~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
+-++++.|.++.+|+.|.|+|..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45778999999999999999974
No 155
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=52.16 E-value=20 Score=25.05 Aligned_cols=22 Identities=18% Similarity=0.218 Sum_probs=18.6
Q ss_pred EEEEEEecCCCCCCEEEEEeCcC
Q 045849 76 YIHHCTIRHLEFNTKYYYVVGIG 98 (320)
Q Consensus 76 ~~~~~~l~~L~p~t~Y~Y~v~~~ 98 (320)
-++++.+.++ +|..|.|+|..+
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~~~ 61 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLDDG 61 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEECCC
Confidence 4667889999 999999999843
No 156
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=48.15 E-value=25 Score=25.42 Aligned_cols=25 Identities=16% Similarity=0.044 Sum_probs=20.7
Q ss_pred ceEEEEEEecCCCCCCEEEEEeCcC
Q 045849 74 SGYIHHCTIRHLEFNTKYYYVVGIG 98 (320)
Q Consensus 74 ~~~~~~~~l~~L~p~t~Y~Y~v~~~ 98 (320)
..-++++.+.++.+|..|.|+|...
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEEe
Confidence 3457788999999999999999653
No 157
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=46.47 E-value=18 Score=26.21 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=37.3
Q ss_pred CCccEEEEeeCCCCCcEEEEEEeCCC-----C-----------CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEE
Q 045849 16 APQQVHITQGDLVGKAVIVSWVTVDE-----P-----------GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHH 79 (320)
Q Consensus 16 ~p~~v~l~~~~~~~~~~~v~W~t~~~-----~-----------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (320)
.|. |.|...+ +++.|++.-+.. . -.-.|.|+..++.. ...... .-.-.
T Consensus 5 PP~-v~v~~~~---~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~~------~~~~~~------~~~~~ 68 (106)
T PF09294_consen 5 PPS-VNVSSCG---GSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSNE------KKKEIE------TKNSS 68 (106)
T ss_dssp SSE-EEEEEET---TEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTSC------EEEEEE------SSSEE
T ss_pred CCE-EEEEECC---CEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCcc------ceEEEe------ecCCE
Confidence 454 8886654 689999887641 0 02345666655430 111111 01123
Q ss_pred EEecCCCCCCEEEEEeCc
Q 045849 80 CTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 80 ~~l~~L~p~t~Y~Y~v~~ 97 (320)
+.|.+|+|++.|..+|..
T Consensus 69 ~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 69 VTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEES--TTSEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEE
Confidence 679999999999999976
No 158
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=40.50 E-value=31 Score=29.64 Aligned_cols=42 Identities=14% Similarity=0.290 Sum_probs=21.4
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVH 315 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 315 (320)
++++|||++-.....-.......+.+..++ ++++ .+++-|+.
T Consensus 56 lIItHHP~~f~~~~~~~~~~~~~~~~~~li-~~~I-~vy~~Ht~ 97 (241)
T PF01784_consen 56 LIITHHPLFFKPLKSLTGDDYKGKIIEKLI-KNGI-SVYSAHTN 97 (241)
T ss_dssp EEEESS-SSSSTSSHCHCHSHHHHHHHHHH-HTT--EEEEESHH
T ss_pred EEEEcCchhhcCCccccccchhhHHHHHHH-HCCC-EEEEeccc
Confidence 778999986543321111122334444444 4788 46777764
No 159
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=37.93 E-value=28 Score=32.76 Aligned_cols=42 Identities=29% Similarity=0.418 Sum_probs=26.0
Q ss_pred CCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCcccc
Q 045849 145 KGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDF 196 (320)
Q Consensus 145 ~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 196 (320)
-.|.+=++||+-+.+..+ +. .|+.+...-.+=.-|||||.-|
T Consensus 190 vVDhLHiVGDIyDRGP~p-------d~---Imd~L~~yhsvDiQWGNHDilW 231 (648)
T COG3855 190 VVDHLHIVGDIYDRGPYP-------DK---IMDTLINYHSVDIQWGNHDILW 231 (648)
T ss_pred hhhheeeecccccCCCCc-------hH---HHHHHhhcccccccccCcceEE
Confidence 678888999998664322 22 3333332233445799999864
No 160
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=36.88 E-value=82 Score=29.05 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=34.8
Q ss_pred HHHhcccCCCCCCCEEEEEecccc-eecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccccc
Q 045849 256 LEEELPKVNRSETPWLIVLMHAPW-YNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAYE 318 (320)
Q Consensus 256 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y~ 318 (320)
.+.+++.++ +.++-+|++.|+-. |..... ..+.+|..-+-..++++|+.+|-|..+
T Consensus 213 ~~~~v~~a~-k~adlviv~~HwG~ey~~~p~------~~q~~~a~~lidAGa~iIvGhhpHvlq 269 (372)
T COG2843 213 VLAAVLAAK-KGADLVIVQPHWGVEYAYEPA------AGQRALARRLIDAGADIIVGHHPHVLQ 269 (372)
T ss_pred hHHHHHhhh-ccCCEEEEeccccccccCCCc------HHHHHHHHHHHhcCcCeEecCCCCcCc
Confidence 444444443 46777999999733 443221 223444444445999999999999864
No 161
>PHA03008 hypothetical protein; Provisional
Probab=35.89 E-value=82 Score=26.07 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=27.1
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcccc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHAY 317 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~y 317 (320)
|++.|-||+.-.+.. .+.. .|..-+.+-+..+.+.||.-.|
T Consensus 164 ILITHgPP~GhLD~~-vGC~----~Ll~~I~rVKPKyHVFGh~~~~ 204 (234)
T PHA03008 164 ILITASPPFAILDDD-LACG----DLFSKVIKIKPKFHIFNGLTQF 204 (234)
T ss_pred EEEeCCCCccccccc-cCcH----HHHHHHHHhCCcEEEeCCcccc
Confidence 899999998865421 2233 3333344668899999995444
No 162
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=35.23 E-value=31 Score=27.35 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=19.6
Q ss_pred EEEecCCCCCCEEEEE--eCcCC---ceeeEEEECCCC
Q 045849 79 HCTIRHLEFNTKYYYV--VGIGH---TERQFWFVTPPE 111 (320)
Q Consensus 79 ~~~l~~L~p~t~Y~Y~--v~~~~---~s~~~~F~t~p~ 111 (320)
.-.+++|.|||+|+.+ |..+. .|....-.|.|-
T Consensus 103 aYqVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~ 140 (184)
T PF07353_consen 103 AYQVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNR 140 (184)
T ss_pred eEEeeccCCCcEEEEEEEEecCccceecceeccccccc
Confidence 3458899999999754 44442 233344445443
No 163
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=35.22 E-value=73 Score=27.39 Aligned_cols=47 Identities=19% Similarity=0.135 Sum_probs=25.1
Q ss_pred eEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCC-eEeCCCCCccc
Q 045849 148 TLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQP-WIWTAGNHEID 195 (320)
Q Consensus 148 ~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~~~~~GNHD~~ 195 (320)
-++++||.+...+...-.+.....+.+.++.+..--+ .+..+| |++.
T Consensus 120 ~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~~l~~l~~~~~i~pG-H~~~ 167 (248)
T TIGR03413 120 PALFCGDTLFSAGCGRLFEGTPEQMYDSLQRLAALPDDTLVYCA-HEYT 167 (248)
T ss_pred CEEEEcCccccCCcCCCCCCCHHHHHHHHHHHHcCCCCeEEECC-CCch
Confidence 3789999987654221111223455555655543222 345677 8863
No 164
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. This domain is found in a range of enzymes that act on branched substrates ie. isoamylase, pullulanase and branching enzyme. Isoamylase hydrolyses 1,6-alpha-D-glucosidic branch linkages in glycogen, amylopectin and dextrin; 1,4-alpha-glucan branching enzyme functions in the formation of 1,6-glucosidic linkages of glycogen; and pullulanase is a starch-debranching enzyme.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BHZ_A 2BY2_A 2BY3_A 2BXY_A 2BY1_A 2BHY_A 2BHU_A 2BXZ_A 2BY0_A 2FHB_A ....
Probab=34.53 E-value=51 Score=22.66 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=19.2
Q ss_pred eEEEEEEec-CCCCCC-EEEEEeCcCC
Q 045849 75 GYIHHCTIR-HLEFNT-KYYYVVGIGH 99 (320)
Q Consensus 75 ~~~~~~~l~-~L~p~t-~Y~Y~v~~~~ 99 (320)
.-+++++|. +|.+|. .|.|+|....
T Consensus 48 ~G~w~~~~~~~~~~g~~~Y~y~i~~~~ 74 (85)
T PF02922_consen 48 DGVWEVTVPGDLPPGGYYYKYRIDGDD 74 (85)
T ss_dssp TTEEEEEEEGCGTTTT-EEEEEEEETT
T ss_pred CCEEEEEEcCCcCCCCEEEEEEEEeCC
Confidence 346677777 889885 9999997753
No 165
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=33.13 E-value=1.3e+02 Score=24.19 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=29.2
Q ss_pred hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEec
Q 045849 250 TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAG 312 (320)
Q Consensus 250 ~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~G 312 (320)
++..+=+.+.|++ .--...|+..|+|++. +...+.+...+.+.+.|+++.|
T Consensus 58 ~~~~~~~~~~l~~---~yP~l~ivg~~~g~f~---------~~~~~~i~~~I~~~~pdiv~vg 108 (172)
T PF03808_consen 58 EEVLEKAAANLRR---RYPGLRIVGYHHGYFD---------EEEEEAIINRINASGPDIVFVG 108 (172)
T ss_pred HHHHHHHHHHHHH---HCCCeEEEEecCCCCC---------hhhHHHHHHHHHHcCCCEEEEE
Confidence 3444445555554 2223356666777662 2234566677778888888766
No 166
>PRK10799 metal-binding protein; Provisional
Probab=32.45 E-value=69 Score=27.62 Aligned_cols=42 Identities=12% Similarity=0.135 Sum_probs=23.1
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCccc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVHA 316 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H~ 316 (320)
+++.|||++-...... ...........+-+.++. +++-|++.
T Consensus 59 lIitHHP~~~~~~~~~--~~~~~~~~~~~li~~~i~-vy~~Htn~ 100 (247)
T PRK10799 59 AVIVHHGYFWKGESPV--IRGMKRNRLKTLLANDIN-LYGWHLPL 100 (247)
T ss_pred EEEECCchhccCCCcc--ccchHHHHHHHHHHCCCe-EEEEecch
Confidence 6679999864332111 111233344455567774 57788764
No 167
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=32.28 E-value=2e+02 Score=20.89 Aligned_cols=74 Identities=22% Similarity=0.215 Sum_probs=45.2
Q ss_pred CCCCCCccEEEEeeCCCCCcEEEEEEeCCCC---CCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEecCCC--
Q 045849 12 PGYNAPQQVHITQGDLVGKAVIVSWVTVDEP---GTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTIRHLE-- 86 (320)
Q Consensus 12 ~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 86 (320)
....+|+.|.+...+ -..++.|.-.... ..-+|+|....+..+..+.+=... ...++.|+...
T Consensus 20 ~~lp~P~nv~~~s~n---f~~iL~W~~~~~~~~~~~ytVq~~~~~~~~W~~v~~C~~i---------~~~~Cdlt~~~~~ 87 (107)
T PF01108_consen 20 ASLPAPQNVTVDSVN---FKHILRWDPGPGSPPNVTYTVQYKKYGSSSWKDVPGCQNI---------TETSCDLTDETSD 87 (107)
T ss_dssp SSGSSCEEEEEEEET---TEEEEEEEESTTSSSTEEEEEEEEESSTSCEEEECCEEEE---------SSSEEECTTCCTT
T ss_pred ccCCCCCeeEEEEEC---CceEEEeCCCCCCCCCeEEEEEEEecCCcceeeccceecc---------cccceeCcchhhc
Confidence 335578888888765 4689999994322 246788884444444444222111 11356677654
Q ss_pred CCCEEEEEeCc
Q 045849 87 FNTKYYYVVGI 97 (320)
Q Consensus 87 p~t~Y~Y~v~~ 97 (320)
+...|+.||..
T Consensus 88 ~~~~Y~~rV~A 98 (107)
T PF01108_consen 88 PSESYYARVRA 98 (107)
T ss_dssp TTSEEEEEEEE
T ss_pred CcCCEEEEEEE
Confidence 67889999975
No 168
>cd02850 Cellulase_N_term Cellulase N-terminus domain. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually catagorized into either exoglucanases which sequentially release sugar units from the cellulose chain and endoglucanases which also attack the chain internally. The N-terminus of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=30.78 E-value=1.9e+02 Score=20.20 Aligned_cols=25 Identities=20% Similarity=0.217 Sum_probs=20.2
Q ss_pred ceEEEEEEecCC-CCCCEEEEEeCcC
Q 045849 74 SGYIHHCTIRHL-EFNTKYYYVVGIG 98 (320)
Q Consensus 74 ~~~~~~~~l~~L-~p~t~Y~Y~v~~~ 98 (320)
...++.+.++.| +|||+|+-+++..
T Consensus 54 g~~~~~~DFS~~~~pG~~Y~l~~~~~ 79 (86)
T cd02850 54 GDNVHIIDFSSYRTEGTGYYLSVDGE 79 (86)
T ss_pred cCeEEEEEcCCCcCCCCeEEEEECCc
Confidence 347889999999 8998898777653
No 169
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=30.25 E-value=65 Score=31.90 Aligned_cols=38 Identities=11% Similarity=-0.072 Sum_probs=28.3
Q ss_pred eEEEEEEecCCCCCCEEEEEeCcCC-----ceeeEEEECCCCC
Q 045849 75 GYIHHCTIRHLEFNTKYYYVVGIGH-----TERQFWFVTPPEV 112 (320)
Q Consensus 75 ~~~~~~~l~~L~p~t~Y~Y~v~~~~-----~s~~~~F~t~p~~ 112 (320)
.=++.++|-++.||++|.|++.... ....+.+.+.+.+
T Consensus 72 ~G~we~~vp~~~~G~~Yky~l~~~~g~~~~~~DP~a~~~~~~p 114 (628)
T COG0296 72 SGIWELFVPGAPPGTRYKYELIDPSGQLRLKADPYARRQEVGP 114 (628)
T ss_pred CceEEEeccCCCCCCeEEEEEeCCCCceeeccCchhhccCCCC
Confidence 3578899999999999999998763 3455666654433
No 170
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=30.07 E-value=2e+02 Score=21.91 Aligned_cols=61 Identities=7% Similarity=0.040 Sum_probs=37.6
Q ss_pred hHHHHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCc--cHHHHHHHHHHHHhCCCcEEEecC
Q 045849 250 TPQYKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYME--GETMRVMYEPWLVKYKVDVVFAGH 313 (320)
Q Consensus 250 ~~q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~v~lvl~GH 313 (320)
.+-+++.+..++. ....-.|.++.-..+......... ...+.+.|..+...|+|++++|++
T Consensus 18 ~~al~~A~aa~~~---gh~v~~vFf~~DgV~~a~~~q~p~~~~~n~~~~~~~L~~~~~v~l~vC~~ 80 (128)
T PRK00207 18 SSAYQFAQALLAE---GHELVSVFFYQDGVLNANALTVPASDEFDLVRAWQQLAAEHGVALNVCVA 80 (128)
T ss_pred HHHHHHHHHHHhC---CCCeeEEEEehHHHHHHhcCCCCchhhhhHHHHHHHHHHhcCCEEEEeHH
Confidence 4455666666554 221135777776666543322222 234677888888999999999975
No 171
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=29.96 E-value=2e+02 Score=29.58 Aligned_cols=86 Identities=15% Similarity=0.229 Sum_probs=48.6
Q ss_pred ccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCC-CCCeEEEeccCCC----Cce-EEEEEEEEEEeccccceEEEEEE
Q 045849 8 FQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEP-GTNTVVYWSENSE----QKE-QAEGKVYTYKYYNYTSGYIHHCT 81 (320)
Q Consensus 8 ~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
.+|.....+|..+....+ .+|+.+.|.-+... +...|.|...=.. ... ..=|....|... ...-..-.|.
T Consensus 326 mpCT~PPSaP~nlis~vn---~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~-q~gLt~~~V~ 401 (996)
T KOG0196|consen 326 MPCTRPPSAPRNLISNVN---GTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTPR-QRGLTETSVT 401 (996)
T ss_pred CCCCCCCCccceeeeecc---cceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECCC-CCCcccceEE
Confidence 344444457877666643 58999999987543 4677777653211 000 000111122110 0111234688
Q ss_pred ecCCCCCCEEEEEeCc
Q 045849 82 IRHLEFNTKYYYVVGI 97 (320)
Q Consensus 82 l~~L~p~t~Y~Y~v~~ 97 (320)
+++|.|-+.|.+.|..
T Consensus 402 v~~L~ah~~YTFeV~A 417 (996)
T KOG0196|consen 402 VSDLLAHTNYTFEVEA 417 (996)
T ss_pred EeccccccccEEEEEE
Confidence 9999999999999953
No 172
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=27.55 E-value=74 Score=24.06 Aligned_cols=24 Identities=21% Similarity=0.401 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhCC-CcEEEecCc
Q 045849 291 ETMRVMYEPWLVKYK-VDVVFAGHV 314 (320)
Q Consensus 291 ~~~~~~l~~l~~~~~-v~lvl~GH~ 314 (320)
..+.+.+..+.++++ ..++++||.
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHS 72 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHS 72 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEET
T ss_pred HHHHHHHHHHHhcccCccchhhccc
Confidence 345677788888885 789999995
No 173
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=26.61 E-value=73 Score=30.15 Aligned_cols=75 Identities=17% Similarity=0.220 Sum_probs=41.2
Q ss_pred CCeEEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhhhhccCCeEeCCCCCccc
Q 045849 116 VPYSFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEID 195 (320)
Q Consensus 116 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 195 (320)
...++.+.||.|........+-.+...+..-.=.++.||++....+..+-. +......+...--+|...||||..
T Consensus 212 ~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~-----~~~~~~kl~~pn~~fl~rgn~Es~ 286 (476)
T KOG0376|consen 212 GDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVI-----LTLFAFKLLYPNNFFLLRGNHESD 286 (476)
T ss_pred CCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeee-----eeehhhcccCCcceeeccCCccch
Confidence 356899999999765433222222222222233567999997644321110 111112333445688999999975
No 174
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.; GO: 0016787 hydrolase activity; PDB: 3H3E_A 3Q6V_B 3SD9_B 3IOF_A 2GKL_A 1X8I_A 3FAI_A 2QDS_A 3IOG_A 3F9O_A ....
Probab=26.37 E-value=1e+02 Score=24.13 Aligned_cols=12 Identities=42% Similarity=0.980 Sum_probs=7.5
Q ss_pred EEEcccccccCC
Q 045849 149 LLFVGDLSYADN 160 (320)
Q Consensus 149 vl~~GD~~~~~~ 160 (320)
++++||+.....
T Consensus 140 vlftGD~~~~~~ 151 (194)
T PF00753_consen 140 VLFTGDLLFSNE 151 (194)
T ss_dssp EEEEETTSCTTT
T ss_pred EEEeeeEeccCC
Confidence 666777766533
No 175
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=26.30 E-value=92 Score=28.34 Aligned_cols=30 Identities=30% Similarity=0.201 Sum_probs=25.8
Q ss_pred cHHHHHHHHHHHHhCCCcEEEecCcccccc
Q 045849 290 GETMRVMYEPWLVKYKVDVVFAGHVHAYER 319 (320)
Q Consensus 290 ~~~~~~~l~~l~~~~~v~lvl~GH~H~y~R 319 (320)
.++..+.+..++++++.|+|++|=.=+|.|
T Consensus 65 ~eea~~~i~~mv~~~~pD~viaGPaFnagr 94 (349)
T PF07355_consen 65 KEEALKKILEMVKKLKPDVVIAGPAFNAGR 94 (349)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcCCch
Confidence 356788999999999999999998877766
No 176
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=26.29 E-value=36 Score=31.82 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=34.6
Q ss_pred EEEEEEcCCCCCCcHHHHHHHHhCCCCCceEEEcccccccCCCCCCCChhhhhHHHHHhh-hhccCCeEeCCCCCccc
Q 045849 119 SFGLIGDLGQSYDSNVTLTHYERNPRKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVER-SAAYQPWIWTAGNHEID 195 (320)
Q Consensus 119 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~GNHD~~ 195 (320)
.+-++||+|..-...-.+-.-.-.+..-.=-|+.||.|+.+.. ..+-..-.+.- +.-...++.-.||||..
T Consensus 166 qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~------siEvLmiL~a~~lv~P~~~~LNRGNHED~ 237 (631)
T KOG0377|consen 166 QVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKR------SIEVLMILFALYLVYPNAVHLNRGNHEDH 237 (631)
T ss_pred ceEEeccccccccceEEEEecCCCCCCCCCeeecCchhhcccc------chhhHHHHHHHHhcCchhhhccCCchHHH
Confidence 3667899997643211110000111112235789999976541 11222111111 12234467789999964
No 177
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=25.48 E-value=1.1e+02 Score=24.14 Aligned_cols=54 Identities=17% Similarity=0.188 Sum_probs=32.4
Q ss_pred HHHHHHhcccCCCCCCCEEEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcc
Q 045849 253 YKWLEEELPKVNRSETPWLIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVH 315 (320)
Q Consensus 253 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 315 (320)
.+.|++.|+. ...+ +|+..-+|.+... ..+...+.+..++++.+.++||.||+-
T Consensus 47 ~~~l~~~l~~---~G~d-~v~~~~~~~~~~~-----~~~~~a~~l~~~~~~~~~~lVl~~~t~ 100 (164)
T PF01012_consen 47 AEALRKALAK---YGAD-KVYHIDDPALAEY-----DPEAYADALAELIKEEGPDLVLFGSTS 100 (164)
T ss_dssp HHHHHHHHHS---TTES-EEEEEE-GGGTTC------HHHHHHHHHHHHHHHT-SEEEEESSH
T ss_pred HHHHhhhhhh---cCCc-EEEEecCcccccc-----CHHHHHHHHHHHHHhcCCCEEEEcCcC
Confidence 3446677764 2344 3333333333211 234577899999999999999999974
No 178
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=24.43 E-value=1.3e+02 Score=26.02 Aligned_cols=41 Identities=10% Similarity=0.124 Sum_probs=22.2
Q ss_pred EEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEecCcc
Q 045849 272 IVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAGHVH 315 (320)
Q Consensus 272 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~GH~H 315 (320)
+++.|||++-...... ......+. ...+.++++ .+++-|+.
T Consensus 60 lIitHHP~~f~~~~~~-~~~~~~~~-~~~li~~~I-~vy~~Ht~ 100 (249)
T TIGR00486 60 LIITHHPLIWKPLKRL-IRGIKPGR-LKILLQNDI-SLYSAHTN 100 (249)
T ss_pred EEEEcCccccCCcccc-cCCCHHHH-HHHHHHCCC-eEEEeecc
Confidence 6779999855332111 11123333 344667888 45777764
No 179
>PF13205 Big_5: Bacterial Ig-like domain
Probab=23.81 E-value=1.3e+02 Score=21.56 Aligned_cols=17 Identities=24% Similarity=0.311 Sum_probs=14.0
Q ss_pred ecCCCCCCEEEEEeCcC
Q 045849 82 IRHLEFNTKYYYVVGIG 98 (320)
Q Consensus 82 l~~L~p~t~Y~Y~v~~~ 98 (320)
...|+||++|.-.|..+
T Consensus 69 ~~~L~~~t~Y~v~i~~~ 85 (107)
T PF13205_consen 69 SQPLKPGTTYTVTIDSG 85 (107)
T ss_pred CCcCCCCCEEEEEECCC
Confidence 35799999999999654
No 180
>COG3426 Butyrate kinase [Energy production and conversion]
Probab=22.88 E-value=90 Score=27.62 Aligned_cols=41 Identities=20% Similarity=0.348 Sum_probs=30.4
Q ss_pred CCCceEEEcccccccCCCCCCCChhhhhHHHHHhhh-hccCCeEeCCCCCccc
Q 045849 144 RKGQTLLFVGDLSYADNYPCHDNNRWDTWGRFVERS-AAYQPWIWTAGNHEID 195 (320)
Q Consensus 144 ~~~d~vl~~GD~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~~~~~GNHD~~ 195 (320)
.++|+|+++|-+.| |+.|...++.- .--.|++..||--|..
T Consensus 295 G~vDaIvLTGGiA~-----------~~~f~~~I~~~v~~iapv~v~PGE~Ele 336 (358)
T COG3426 295 GKVDAIVLTGGIAY-----------EKLFVDAIEDRVSWIAPVIVYPGEDELE 336 (358)
T ss_pred CCCCEEEEecchhh-----------HHHHHHHHHHHHhhhcceEecCCchHHH
Confidence 69999999999984 45665555432 3345899999998874
No 181
>KOG4222 consensus Axon guidance receptor Dscam [Signal transduction mechanisms]
Probab=22.46 E-value=1.4e+02 Score=31.78 Aligned_cols=80 Identities=23% Similarity=0.393 Sum_probs=0.0
Q ss_pred CCccccCCCCCCCCccEEEEeeCCCCCcEEEEEEeCCCCCCCeEE------EeccCCCCceEEEEEEEEEEeccccceEE
Q 045849 4 DADVFQVPPGYNAPQQVHITQGDLVGKAVIVSWVTVDEPGTNTVV------YWSENSEQKEQAEGKVYTYKYYNYTSGYI 77 (320)
Q Consensus 4 ~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~v~------y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (320)
|.-.++.+++...+ .+.+.+++++.|......+..-+. |+..-...+.++.+...+-.
T Consensus 522 D~S~~pS~p~~p~v-------~~v~~~~v~LsW~~~s~sg~vP~s~yiieafs~~~~etw~~ta~~v~~t~--------- 585 (1281)
T KOG4222|consen 522 DPSALPSPPGTPGV-------VNVSRTSVTLSWQPTSPSGAVPASGYIIEAFSPDLGETWQTTAGRVKTTT--------- 585 (1281)
T ss_pred ChhhCCCCCCCCcc-------ccCCCceEEecccCCCCCCccccchhHHHHhhhhhcccccccccccccce---------
Q ss_pred EEEEecCCCCCCEEEEEeCcCCce
Q 045849 78 HHCTIRHLEFNTKYYYVVGIGHTE 101 (320)
Q Consensus 78 ~~~~l~~L~p~t~Y~Y~v~~~~~s 101 (320)
+.|.||+|++.|.+-|...+..
T Consensus 586 --~~I~gL~P~~sylf~vRa~n~~ 607 (1281)
T KOG4222|consen 586 --YAIRGLKPNLSYLFLVRAENEQ 607 (1281)
T ss_pred --eeecCcCccceeeeeeeccccc
No 182
>TIGR03000 plancto_dom_1 Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.
Probab=22.25 E-value=2.2e+02 Score=19.64 Aligned_cols=23 Identities=30% Similarity=0.416 Sum_probs=17.5
Q ss_pred eEEEEEEecCCCCCCEEEEEeCc
Q 045849 75 GYIHHCTIRHLEFNTKYYYVVGI 97 (320)
Q Consensus 75 ~~~~~~~l~~L~p~t~Y~Y~v~~ 97 (320)
+-.+.-.=.+|++|..|.|++..
T Consensus 26 G~~R~F~T~~L~~G~~y~Y~v~a 48 (75)
T TIGR03000 26 GTVRTFTTPPLEAGKEYEYTVTA 48 (75)
T ss_pred ccEEEEECCCCCCCCEEEEEEEE
Confidence 33444456799999999999976
No 183
>PF10342 GPI-anchored: Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family; InterPro: IPR018466 This entry represents glycoproteins involved in cell wall (1-->6)-beta-glucan assembly. In yeast a null mutation leads to severe growth defects, aberrant multi-budded morphology, and mating defects [, ]. The entry includes DRMIP and Hesp-379, which are involved in both fruiting body formation and in host attack respectively. Hesp-379 is a haustorially expressed secreted protein; the haustorium being the small sucker that penetrates host tissue [].
Probab=22.21 E-value=2.7e+02 Score=19.17 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=31.8
Q ss_pred CcEEEEEEeCC-CCCCCeEEEeccCCCCceEEEEEEEEEEeccccceEEEEEEe-cCCCCCCEEEEEeCcC
Q 045849 30 KAVIVSWVTVD-EPGTNTVVYWSENSEQKEQAEGKVYTYKYYNYTSGYIHHCTI-RHLEFNTKYYYVVGIG 98 (320)
Q Consensus 30 ~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~L~p~t~Y~Y~v~~~ 98 (320)
...+|.|.... .+....+..-.................. ...-.....+ .+|.++..|+.++...
T Consensus 13 ~~~~I~W~~~~~~~~~~~I~L~~g~~~~~~~~~~ia~~v~----~~~gs~~~~~p~~l~~~~~Y~i~~~~~ 79 (93)
T PF10342_consen 13 QPITITWTSDGTDPGNVTIYLCNGNNTNLNFVQTIASNVS----NSDGSYTWTIPSDLPSGGDYFIQIVNS 79 (93)
T ss_pred CcEEEEEeCCCCCCcEEEEEEEcCCCCCcceeEEEEeccc----CCCCEEEEEcCCCCCCCCcEEEEEEEC
Confidence 56999999974 3333444443333211001100000100 1112233444 6799999998888754
No 184
>PRK10425 DNase TatD; Provisional
Probab=21.58 E-value=67 Score=27.94 Aligned_cols=40 Identities=18% Similarity=0.127 Sum_probs=24.4
Q ss_pred EEEEEcccCCCCCChHHHHHHHHhcccCCCCCCCEEEEEeccc
Q 045849 236 YIIVLSSYSAYGKYTPQYKWLEEELPKVNRSETPWLIVLMHAP 278 (320)
Q Consensus 236 ~fi~lds~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~~H~P 278 (320)
-=|+||-.........|.++++++|+-+..-+.| |+.|.+
T Consensus 90 GEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~P---v~iH~r 129 (258)
T PRK10425 90 GECGLDFNRNFSTPEEQERAFVAQLAIAAELNMP---VFMHCR 129 (258)
T ss_pred eeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCC---eEEEEe
Confidence 3466764322233478999999999875433433 566754
No 185
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=21.12 E-value=2.8e+02 Score=22.20 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=18.9
Q ss_pred EEEEecccceecCCCCCCccHHHHHHHHHHHHhCCCcEEEec
Q 045849 271 LIVLMHAPWYNSYNYHYMEGETMRVMYEPWLVKYKVDVVFAG 312 (320)
Q Consensus 271 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v~lvl~G 312 (320)
.|+.+|+|++..... ..+...+.+.+.|+||.|
T Consensus 74 ~i~g~~~g~~~~~~~---------~~i~~~I~~~~pdiv~vg 106 (171)
T cd06533 74 KIVGYHHGYFGPEEE---------EEIIERINASGADILFVG 106 (171)
T ss_pred EEEEecCCCCChhhH---------HHHHHHHHHcCCCEEEEE
Confidence 566667777663221 125555666666666654
No 186
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Probab=20.93 E-value=1.3e+02 Score=20.48 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhCCCcEEEecCc
Q 045849 292 TMRVMYEPWLVKYKVDVVFAGHV 314 (320)
Q Consensus 292 ~~~~~l~~l~~~~~v~lvl~GH~ 314 (320)
.+.+.+....++.++++++.||.
T Consensus 35 ~~~~~~~~~a~~~~~~~Iv~G~~ 57 (86)
T cd01984 35 AFVRILKRLAAEEGADVIILGHN 57 (86)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCC
Confidence 45667888888999999999996
No 187
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=20.76 E-value=3.8e+02 Score=20.30 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=36.9
Q ss_pred hHHHHHHHHhcccCCCCCCC-EEEEEecccceecCCCCCC--ccHHHHHHHHHHHHhCCCcEEEec
Q 045849 250 TPQYKWLEEELPKVNRSETP-WLIVLMHAPWYNSYNYHYM--EGETMRVMYEPWLVKYKVDVVFAG 312 (320)
Q Consensus 250 ~~q~~WL~~~L~~~~~~~~~-~~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~v~lvl~G 312 (320)
.+-+++.+..++. ..+ -.|.++.-..+........ +...+.+.|..+...|+|++++|.
T Consensus 17 ~~al~~A~aa~~~----gh~v~~vFf~~DgV~~a~~~q~p~~~~~n~~~~~~~L~~~~~i~l~vC~ 78 (127)
T TIGR03012 17 SSAYQFAQALLAK----GHEIVRVFFYQDGVLNANNLVSPASDEFDLVAAWQQLAQEHQVDLVVCV 78 (127)
T ss_pred HHHHHHHHHHHHC----CCcEEEEEEehHHHHhhccCCCCccccccHHHHHHHHHHhcCCEEEeeH
Confidence 3445566666554 222 3677777766654332211 223567888888889999999984
No 188
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=20.68 E-value=2.3e+02 Score=19.10 Aligned_cols=37 Identities=11% Similarity=0.043 Sum_probs=24.4
Q ss_pred CeEEEEEEcCCCCCC--cHHHHHHHHhCCCCCceEEEcccc
Q 045849 117 PYSFGLIGDLGQSYD--SNVTLTHYERNPRKGQTLLFVGDL 155 (320)
Q Consensus 117 ~~~f~~~gD~~~~~~--~~~~l~~~~~~~~~~d~vl~~GD~ 155 (320)
.+|+++.|.-..... ....|+++.+. .|+++|+.|..
T Consensus 3 g~rVli~GgR~~~D~~~i~~~Ld~~~~~--~~~~~lvhGga 41 (71)
T PF10686_consen 3 GMRVLITGGRDWTDHELIWAALDKVHAR--HPDMVLVHGGA 41 (71)
T ss_pred CCEEEEEECCccccHHHHHHHHHHHHHh--CCCEEEEECCC
Confidence 568999998765422 23456666665 68887777765
No 189
>PF05986 ADAM_spacer1: ADAM-TS Spacer 1; InterPro: IPR010294 This domain represents the Spacer-1 domain from the ADAM-TS family of metalloproteinases []. A cellular disintegrin and metalloproteinase (ADAM) is a family of genes with structural homology to the snake venom metalloproteinases and disintegrins []. There is variation amongst members of the family, however, all have a similar domain organisation comprising a preproregion, a reprolysin-type catalytic domain, a disintegrin-like domain, a thrombospondin type-1 (TS) module, a cysteine-rich domain, a spacer domain without cysteine residues, and a COOH-terminal TS module [, ]. They are involved in embryogenesis and have been implicated in some cancers and inflammatory diseases [].; GO: 0004222 metalloendopeptidase activity, 0031012 extracellular matrix
Probab=20.23 E-value=3.6e+02 Score=19.95 Aligned_cols=20 Identities=15% Similarity=0.217 Sum_probs=12.7
Q ss_pred EEEEEEec-CCCCCCEEEEEe
Q 045849 76 YIHHCTIR-HLEFNTKYYYVV 95 (320)
Q Consensus 76 ~~~~~~l~-~L~p~t~Y~Y~v 95 (320)
....+... +-.|+-+|.|-|
T Consensus 93 l~v~vl~~~~~np~I~Y~Y~i 113 (114)
T PF05986_consen 93 LIVQVLSQNESNPGITYEYTI 113 (114)
T ss_pred EEEEEEEecCCCCCeEEEEEC
Confidence 33344444 677888888865
Done!