Query 045851
Match_columns 473
No_of_seqs 96 out of 117
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 10:27:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045851.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045851hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gs9a_ a.24.1.1 (A:) Apolipop 45.9 27 0.0019 28.1 7.2 29 104-132 71-99 (144)
2 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 40.4 21 0.0016 26.7 5.1 39 38-76 28-66 (67)
3 d1fxka_ a.2.5.1 (A:) Prefoldin 33.4 44 0.0032 25.7 6.3 39 38-77 10-48 (107)
4 d2efla1 a.238.1.4 (A:1-288) Fo 18.5 2.4E+02 0.017 23.1 23.0 46 91-136 98-143 (288)
5 d2efka1 a.238.1.4 (A:10-288) C 16.3 2.7E+02 0.019 22.7 20.0 18 86-103 112-129 (279)
6 d1nkpa_ a.38.1.1 (A:) Myc prot 15.8 1.1E+02 0.0082 22.4 5.2 26 45-70 47-72 (88)
7 d1fxkc_ a.2.5.1 (C:) Prefoldin 13.5 1.5E+02 0.011 22.7 5.8 11 14-24 85-95 (133)
8 d1gs9a_ a.24.1.1 (A:) Apolipop 13.5 1.1E+02 0.0081 24.2 4.9 24 109-132 65-88 (144)
9 d1nlwa_ a.38.1.1 (A:) Mad prot 13.1 1.2E+02 0.009 21.7 4.7 28 45-72 42-69 (79)
10 d2efla1 a.238.1.4 (A:1-288) Fo 12.0 3.5E+02 0.026 21.9 15.5 14 217-230 248-261 (288)
No 1
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=45.90 E-value=27 Score=28.14 Aligned_cols=29 Identities=7% Similarity=0.201 Sum_probs=18.7
Q ss_pred HhhhhhhHHhHHHHHHHHHHHHHHHHHHH
Q 045851 104 KSRKQIDFLNSKFVNELAKAESSAKQFMQ 132 (473)
Q Consensus 104 k~Rkr~E~ln~KL~~ELaE~Kss~~~~lk 132 (473)
++.+.++.|-.+|...|.+++..+..++.
T Consensus 71 ~l~~~~e~lr~~l~~~lee~r~kl~~~~e 99 (144)
T d1gs9a_ 71 RLSKELQAAQARLGADMEDVRGRLVQYRG 99 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777777777777666555433
No 2
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.44 E-value=21 Score=26.73 Aligned_cols=39 Identities=28% Similarity=0.349 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHh
Q 045851 38 VSALQAELVQARLRIHELEDEHRSSKKKYENLVRKLREE 76 (473)
Q Consensus 38 v~aLk~EL~~Ar~rI~eL~~E~~s~~~eie~L~KqlaEE 76 (473)
|-.+..||+++++.|+.|+++--..+-.+=+|---||-|
T Consensus 28 V~diE~eLerCk~~irrLeqel~~ErF~~iYLQt~LA~e 66 (67)
T d1k1fa_ 28 VGDIEQELERAKASIRRLEQEVNQERFRMIYLQTLLAKE 66 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 788999999999999999998777666666666655544
No 3
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=33.35 E-value=44 Score=25.72 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHhH
Q 045851 38 VSALQAELVQARLRIHELEDEHRSSKKKYENLVRKLREER 77 (473)
Q Consensus 38 v~aLk~EL~~Ar~rI~eL~~E~~s~~~eie~L~KqlaEEK 77 (473)
+..|+.+|..+..++.+|+.+.+-...-++.| ..+.++.
T Consensus 10 ~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL-~~l~~d~ 48 (107)
T d1fxka_ 10 FQQLQQQAQAISVQKQTVEMQINETQKALEEL-SRAADDA 48 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCccc
Confidence 67889999999999999998888766655553 3444443
No 4
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.45 E-value=2.4e+02 Score=23.05 Aligned_cols=46 Identities=13% Similarity=0.103 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 045851 91 IVDELKDELSKERKSRKQIDFLNSKFVNELAKAESSAKQFMQYYEE 136 (473)
Q Consensus 91 ~i~slk~ELe~ERk~Rkr~E~ln~KL~~ELaE~Kss~~~~lkelE~ 136 (473)
+++.++.-+.+-++.||.+...-.|+.+++......+.++.+.|..
T Consensus 98 i~~~l~~~~~~~~~~~K~~~~~~~k~~k~~~~~~~~l~k~k~~Y~~ 143 (288)
T d2efla1 98 IIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFER 143 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555556667777888888888888888888887777777754
No 5
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.29 E-value=2.7e+02 Score=22.67 Aligned_cols=18 Identities=6% Similarity=0.143 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045851 86 YKMEAIVDELKDELSKER 103 (473)
Q Consensus 86 eki~a~i~slk~ELe~ER 103 (473)
.++...+......|+.-|
T Consensus 112 ~~~~k~l~~~~~~~~k~k 129 (279)
T d2efka1 112 RRAQQQLENGFKQLENSK 129 (279)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444444444444444
No 6
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.84 E-value=1.1e+02 Score=22.38 Aligned_cols=26 Identities=19% Similarity=0.133 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHhhhchhhHHHHH
Q 045851 45 LVQARLRIHELEDEHRSSKKKYENLV 70 (473)
Q Consensus 45 L~~Ar~rI~eL~~E~~s~~~eie~L~ 70 (473)
|..|-..|+.|.++......+++.|.
T Consensus 47 L~~A~~yI~~L~~~~~~l~~~~~~l~ 72 (88)
T d1nkpa_ 47 LKKATAYILSVQAEEQKLISEEDLLR 72 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666665554444444443
No 7
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=13.52 E-value=1.5e+02 Score=22.70 Aligned_cols=11 Identities=9% Similarity=-0.049 Sum_probs=4.9
Q ss_pred chHHHHHhhhc
Q 045851 14 TAREAYCLYNH 24 (473)
Q Consensus 14 Ts~ellkvlnr 24 (473)
|..+...+|.+
T Consensus 85 ~~~eA~~~l~~ 95 (133)
T d1fxkc_ 85 NFEDAMESIKS 95 (133)
T ss_dssp EHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 34444444444
No 8
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=13.45 E-value=1.1e+02 Score=24.16 Aligned_cols=24 Identities=17% Similarity=0.191 Sum_probs=10.2
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHH
Q 045851 109 IDFLNSKFVNELAKAESSAKQFMQ 132 (473)
Q Consensus 109 ~E~ln~KL~~ELaE~Kss~~~~lk 132 (473)
++.+..+|..++.+++..+...+.
T Consensus 65 ~~e~~~~l~~~~e~lr~~l~~~le 88 (144)
T d1gs9a_ 65 AEETRARLSKELQAAQARLGADME 88 (144)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHH
Confidence 333444444444444444444443
No 9
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.06 E-value=1.2e+02 Score=21.68 Aligned_cols=28 Identities=36% Similarity=0.611 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHhhhchhhHHHHHHH
Q 045851 45 LVQARLRIHELEDEHRSSKKKYENLVRK 72 (473)
Q Consensus 45 L~~Ar~rI~eL~~E~~s~~~eie~L~Kq 72 (473)
|..|-..|+.|..+.+....+++.|.++
T Consensus 42 L~~A~~yI~~L~~~~~~l~~~~~~L~~~ 69 (79)
T d1nlwa_ 42 LTKAKLHIKKLEDSDRKAVHQIDQLQRE 69 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666555444444444433
No 10
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.99 E-value=3.5e+02 Score=21.89 Aligned_cols=14 Identities=14% Similarity=0.211 Sum_probs=7.6
Q ss_pred HHHHHHHHhhccCc
Q 045851 217 KAELIIRAVKLLNI 230 (473)
Q Consensus 217 ~ae~~rqs~~Sv~~ 230 (473)
..+.+..+++.++.
T Consensus 248 ~~~~l~~~~~~id~ 261 (288)
T d2efla1 248 CLDGIVKAAESIDQ 261 (288)
T ss_dssp HHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHCCH
Confidence 34455666666544
Done!