BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045852
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42484|RPS2_ARATH Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2
PE=1 SV=1
Length = 909
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 45 NTVFQNLETLSAHFCLNLTNLMPSSASFRCLTKLRVWACEHLINLVASSAAKNLVQLVHV 104
N +LE L+ H NLT + +S S CL +R H L S + L +L +
Sbjct: 741 NDWLPSLEVLTLHSLHNLTRVWGNSVSQDCLRNIRCINISHCNKLKNVSWVQKLPKLEVI 800
Query: 105 SVSECSKITELVVASEGDAANDEIIFPKLGYLELHRLQSLTTFCSANYTFKFPSLCDLSV 164
+ +C +I EL+ E + D +FP L L L L + + ++F+ + L +
Sbjct: 801 ELFDCREIEELISEHESPSVEDPTLFPSLKTLRTRDLPELNSILPSRFSFQ--KVETLVI 858
Query: 165 SACPKMK 171
+ CP++K
Sbjct: 859 TNCPRVK 865
>sp|O64789|DRL18_ARATH Probable disease resistance protein At1g61310 OS=Arabidopsis
thaliana GN=At1g61310 PE=2 SV=1
Length = 925
Score = 38.5 bits (88), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 16 IAKIWQGPFTDHLLNKLEHLW-LWEQNSKLNTVF-QNLETLSAHFCLNLTNLMPSSASFR 73
I Q PF L +E+L LW +NS + + + ET S++ +N P F
Sbjct: 695 IEGFLQKPFDLSFLASMENLSSLWVKNSYFSEIKCRESETDSSYLHIN-----PKIPCFT 749
Query: 74 CLTKLRVWACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVASEGDAANDEIIFPKL 133
L++L + C + +L A NLV L + + ++ E++ + F KL
Sbjct: 750 NLSRLDIVKCHSMKDLTWILFAPNLVVLF---IEDSREVGEIINKEKATNLTSITPFLKL 806
Query: 134 GYLELHRLQSLTTFCSANYTFKFPSLCDLSVSACPKMKIFCGGVFSAPRLKE 185
L L L L + + FP L ++ V CPK++ SAP+++E
Sbjct: 807 ERLILCYLPKLESIYWS--PLPFPLLLNIDVEECPKLRKLPLNATSAPKVEE 856
>sp|Q9LVT4|DRL37_ARATH Probable disease resistance protein At5g47250 OS=Arabidopsis
thaliana GN=At5g47250 PE=2 SV=1
Length = 843
Score = 37.4 bits (85), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 63 TNLMPSSASFRCLTKLRVWACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVASEGD 122
+ + PS+ F+ L+ + + +C HL +L A NL L SV K+TEL+ +
Sbjct: 735 SEITPSNPWFKDLSAVVINSCIHLKDLTWLMYAANLESL---SVESSPKMTELINKEKAQ 791
Query: 123 AANDEIIFPKLGYLELHRLQSLTTFCSANYTFKFPSLCDLSVSACPKM 170
+ F +L L LH L+ L + + +F L + + CP +
Sbjct: 792 GVGVDP-FQELQVLRLHYLKELGSIYGSQVSFPKLKLNKVDIENCPNL 838
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana
GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 37.0 bits (84), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 42 SKLNTVFQNLETLSAHFCLNLTNLMPS-SASFRCLTKLRVWACEHLINLVASSAAKNLVQ 100
S L + QNL++L C LT+L + + S+ L +L + AC L + S L
Sbjct: 1084 SHLMELPQNLQSLHIDSCDGLTSLPENLTESYPNLHELLIIACHSLESFPGSHPPTTLKT 1143
Query: 101 LVHVSVSECSKI--TELVVASE----------GDAANDEI-----IFPKLGYLELHRLQS 143
L + +C K+ TE + + G + ++ + +FPKL L + +S
Sbjct: 1144 LY---IRDCKKLNFTESLQPTRSYSQLEYLFIGSSCSNLVNFPLSLFPKLRSLSIRDCES 1200
Query: 144 LTTFC-SANYTFKFPSLCDLSVSACPKMKIFCGGVFSAPRLKEVCLNDIEKL 194
TF A +L L + CP ++ F G P+L + L++ +KL
Sbjct: 1201 FKTFSIHAGLGDDRIALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKL 1252
>sp|Q940K0|DRL15_ARATH Probable disease resistance protein At1g61180 OS=Arabidopsis
thaliana GN=At1g61180 PE=2 SV=2
Length = 889
Score = 35.8 bits (81), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 12/172 (6%)
Query: 16 IAKIWQGPFTDHLLNKLEHLW-LWEQNSKLNTVF-QNLETLSAHFCLNLTNLMPSSASFR 73
I Q PF L +E+L L +NS + + + ET S++ +N P F
Sbjct: 682 IEGFLQKPFDLSFLASMENLSSLRVENSYFSEIKCRESETESSYLRIN-----PKIPCFT 736
Query: 74 CLTKLRVWACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVASEGDAANDEIIFPKL 133
L++L + C + +L A NLV L+ + + ++ E++ + F KL
Sbjct: 737 NLSRLEIMKCHSMKDLTWILFAPNLVVLL---IEDSREVGEIINKEKATNLTSITPFLKL 793
Query: 134 GYLELHRLQSLTTFCSANYTFKFPSLCDLSVSACPKMKIFCGGVFSAPRLKE 185
+L L+ L L + + FP L + VS CPK++ S +++E
Sbjct: 794 EWLILYNLPKLESIYWS--PLPFPVLLTMDVSNCPKLRKLPLNATSVSKVEE 843
>sp|Q875V8|SC241_NAUCC Protein transport protein SEC24-1 OS=Naumovozyma castellii (strain
ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630)
GN=SEC241 PE=3 SV=1
Length = 911
Score = 35.8 bits (81), Expect = 0.24, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 2 LPNLEELRLSKNKDIAKIWQGPFTDHLLNKLEHLWLWEQNSKLNTVFQNLETLSAHFCLN 61
+PN+ E+ + K +++ + + PF + + N + L +N +Q+L L +
Sbjct: 813 VPNILEMPIGK-QEVPVVPESPFNERIRNIINRL----RNHDDVITYQSLYILRS----- 862
Query: 62 LTNLMPSSASFRCLTKLRVWACEHLI--NLVASSAAKNLVQLVHVSVSE 108
+N P A+ + L+ LR+WA HL+ ++ S ++ +Q++ S+
Sbjct: 863 ASNSDPVQANAKELSSLRMWASTHLVEDKIMGSEGYRDFLQMMKNKTSK 911
>sp|O22727|DRL16_ARATH Probable disease resistance protein At1g61190 OS=Arabidopsis
thaliana GN=At1g61190 PE=3 SV=1
Length = 967
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 31/205 (15%)
Query: 2 LPNLEELRLSKNKD----------------IAKIWQGPFTDHLLNKLEHLW-LWEQNS-- 42
L NL++LR++++ + I Q PF L +E+L+ L +NS
Sbjct: 656 LENLQDLRITESAELISLDQRLAKLISVLRIEGFLQKPFDLSFLASMENLYGLLVENSYF 715
Query: 43 -KLNTVFQNLETLSAHFCLNLTNLMPSSASFRCLTKLRVWACEHLINLVASSAAKNLVQL 101
++N + ET S++ +N P F LT L + C + +L A NLV L
Sbjct: 716 SEINIKCRESETESSYLHIN-----PKIPCFTNLTGLIIMKCHSMKDLTWILFAPNLVNL 770
Query: 102 VHVSVSECSKITELVVASEGDAANDEII-FPKLGYLELHRLQSLTTFCSANYTFKFPSLC 160
+ + ++ E++ + I F KL L L+ L L + + FP L
Sbjct: 771 ---DIRDSREVGEIINKEKAINLTSIITPFQKLERLFLYGLPKLESIYWS--PLPFPLLS 825
Query: 161 DLSVSACPKMKIFCGGVFSAPRLKE 185
++ V CPK++ S P ++E
Sbjct: 826 NIVVKYCPKLRKLPLNATSVPLVEE 850
>sp|Q9C8T9|DRL19_ARATH Putative disease resistance protein At1g63350 OS=Arabidopsis
thaliana GN=At1g63350 PE=2 SV=1
Length = 898
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 3/128 (2%)
Query: 44 LNTVFQNLETLSAHFCLNLTNLMPSSASFRCLTKLRVWACEHLINLVASSAAKNLVQLVH 103
L L+ + C M SF L ++ + C L L A NL +L
Sbjct: 706 LPVTMDRLQEFTIEHCHTSEIKMGRICSFSSLIEVNLSNCRRLRELTFLMFAPNLKRLHV 765
Query: 104 VSVSECSKITELVVASEGDAANDEIIFPKLGYLELHRLQSLTTFCSANYTFKFPSLCDLS 163
VS ++ I A +G+ + + FPKL L L+ L+ L + FP L ++
Sbjct: 766 VSSNQLEDIINKEKAHDGEKSGI-VPFPKLNELHLYNLRELKNIYWS--PLPFPCLEKIN 822
Query: 164 VSACPKMK 171
V CP +K
Sbjct: 823 VMGCPNLK 830
>sp|O64790|DRL17_ARATH Probable disease resistance protein At1g61300 OS=Arabidopsis
thaliana GN=At1g61300 PE=2 SV=2
Length = 762
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 12/167 (7%)
Query: 21 QGPFTDHLLNKLEHLW-LWEQNSKLNTVF-QNLETLSAHFCLNLTNLMPSSASFRCLTKL 78
Q PF L +E+L LW +NS + + + ET S++ +N P F L++L
Sbjct: 575 QKPFDLSFLASMENLSSLWVKNSYFSEIKCRESETASSYLRIN-----PKIPCFTNLSRL 629
Query: 79 RVWACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVASEGDAANDEIIFPKLGYLEL 138
+ C + +L A NLV L + + ++ E++ + F KL L L
Sbjct: 630 GLSKCHSIKDLTWILFAPNLVYLY---IEDSREVGEIINKEKATNLTSITPFLKLERLIL 686
Query: 139 HRLQSLTTFCSANYTFKFPSLCDLSVSACPKMKIFCGGVFSAPRLKE 185
+ L L + + FP L + V CPK++ S P ++E
Sbjct: 687 YNLPKLESIYWS--PLHFPRLLIIHVLDCPKLRKLPLNATSVPLVEE 731
>sp|B1MVZ9|RL18_LEUCK 50S ribosomal protein L18 OS=Leuconostoc citreum (strain KM20)
GN=rplR PE=3 SV=1
Length = 117
Score = 34.7 bits (78), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 60 LNLTNLMPSSASFRCLTKLRVWACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVAS 119
++ T P FR + + + + +SA+ + ++ + +K+ EL+ A+
Sbjct: 22 ISGTAARPRLNVFRSNANIYAQLIDDVAGVTLASASSHDAEVSGTKTEQATKVGELI-AT 80
Query: 120 EGDAAN-DEIIFPKLGYLELHRLQSLTTFCSAN 151
G AA +++IF + GYL R+Q+L N
Sbjct: 81 RGKAAGFEDVIFDRGGYLYHGRVQALAESAREN 113
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 34.7 bits (78), Expect = 0.53, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 48/240 (20%)
Query: 2 LPNLEELRLSKNK---DIAKIWQGPFTDHLLNKLEHLWLWEQNSKLNTVFQNLET--LSA 56
L NL+EL +S NK DI+++ P + + ++ E ++ + LET L
Sbjct: 223 LVNLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILPELETFYLQE 282
Query: 57 HFCLNLTNL----------------MPSSASFRCLTKLRVWACEHLINLVASSAAKNLVQ 100
+ +LT+L + S A+ + TKL++ + +L L +
Sbjct: 283 NDLTDLTSLAKLPKLKNLYIKGNASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSE 342
Query: 101 LVHVSVSECSKITELVVASEGDAAN------DEIIFPKLGYL-ELHRLQSL-----TTFC 148
L + +S CSK+ E + S D N D LG L L +LQ+L
Sbjct: 343 LEMIQLSGCSKLKE--ITSLKDLPNLVNITADSCAIEDLGTLNNLPKLQTLILSDNKDLT 400
Query: 149 SANYTFKFPSLCDLSVSACPKMKIFCGGVFSAPRLKEVCL-----------NDIEKLFYL 197
+ N P L L++ C I G + + P+L+++ L ND+ +L YL
Sbjct: 401 NINAITDMPQLKTLALDGCGITSI--GTLDNLPKLEKLDLKENQLTSISEINDLPRLSYL 458
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 33.1 bits (74), Expect = 1.5, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 33/220 (15%)
Query: 2 LPNLEELRLSKNK---DIAKIWQGPFTDHLLNKLEHLWLWEQNSKLNTVFQNLET--LSA 56
L NL+EL +S NK DI+++ P + + ++ E + V LET L
Sbjct: 226 LVNLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLPELETFYLQE 285
Query: 57 HFCLNLTNL----------MPSSASFRCL------TKLRVWACEHLINLVASSAAKNLVQ 100
+ NLT+L + +AS + L TKL++ + +L L +
Sbjct: 286 NDLTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSE 345
Query: 101 LVHVSVSECSKITELV----VASEGDAANDEIIFPKLGYL-ELHRLQSLTTFCSANYT-- 153
L + +S CSK+ E+ + + + D LG L L +LQ+L + N T
Sbjct: 346 LEMIQLSGCSKLKEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQTLVLSDNENLTNI 405
Query: 154 ---FKFPSLCDLSVSACPKMKIFCGGVFSAPRLKEVCLND 190
P L L++ C I G + + P+L+++ L +
Sbjct: 406 TAITDLPQLKTLTLDGCGITSI--GTLDNLPKLEKLDLKE 443
>sp|Q9QXB9|DRG2_MOUSE Developmentally-regulated GTP-binding protein 2 OS=Mus musculus
GN=Drg2 PE=1 SV=1
Length = 364
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 82 ACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVASEGDAANDEIIFPKLGYLELHRL 141
A E+ + L+ + AK QL+ S S SK V GDA I FP +G L
Sbjct: 22 ATEYHLGLLKAKLAKYRAQLLEPSKSASSKGEGFDVMKSGDARVALIGFPSVGKSTFLSL 81
Query: 142 QSLTTFCSANYTF 154
+ T +A+Y F
Sbjct: 82 MTSTASEAASYEF 94
>sp|P55039|DRG2_HUMAN Developmentally-regulated GTP-binding protein 2 OS=Homo sapiens
GN=DRG2 PE=1 SV=1
Length = 364
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 82 ACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVASEGDAANDEIIFPKLGYLELHRL 141
A E+ + L+ + AK QL+ S S SK V GDA I FP +G L
Sbjct: 22 ATEYHLGLLKAKLAKYRAQLLEPSKSASSKGEGFDVMKSGDARVALIGFPSVGKSTFLSL 81
Query: 142 QSLTTFCSANYTF 154
+ T +A+Y F
Sbjct: 82 MTSTASEAASYEF 94
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 19/130 (14%)
Query: 48 FQNLETLSAHFCLNLTNLMPSSASFRCLTKLRVWACEHLINLVASSAA--KNLVQLVHVS 105
++LE LS C N+T + F L +L + C LV SA KNL+ L +S
Sbjct: 276 MRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGC-----LVLGSAVVLKNLINLKVLS 330
Query: 106 VSECSKITELVVASEGDAANDEIIFPKLGYLELHRLQSLTTFCSANYTFKFPSLCDLSVS 165
VS C +L + + KL H + SL + +L +L +S
Sbjct: 331 VSNCKNFKDL------NGLERLVNLDKLNLSGCHGVSSL------GFVANLSNLKELDIS 378
Query: 166 ACPKMKIFCG 175
C + F G
Sbjct: 379 GCESLVCFDG 388
>sp|P23799|ESAG8_TRYBB Putative adenylate cyclase regulatory protein OS=Trypanosoma brucei
brucei GN=ESAG8 PE=2 SV=1
Length = 630
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 49 QNLETLSAHFCLNLTNLMPSSASFRCLTKLRVWACEHLINLVASSAA--KNLVQLVHVSV 106
++LE LS C N+T + F L +L + C LV SA KNL+ L +SV
Sbjct: 277 RSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGC-----LVLGSAVVLKNLINLKVLSV 331
Query: 107 SECSKITELVVASEGDAANDEIIFPKLGYLELHRLQSLTTFCSANYTFKFPSLCDLSVSA 166
S C +L + + KL H + SL + +L +L +S
Sbjct: 332 SNCKNFKDL------NGLERLVNLEKLNLSGCHGVSSL------GFVANLSNLKELDISG 379
Query: 167 CPKMKIFCG 175
C + F G
Sbjct: 380 CESLVCFDG 388
>sp|P78847|NU186_SCHPO Nucleoporin nup186 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nup186 PE=2 SV=2
Length = 1647
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 33 EHLWLWEQNSKLNTVFQNLETLSAHFCLNLTNLMPSSASFRCLTKLRVWACEHLINLV 90
++ WL +QNSKL + Q L T +AH L L ++ ++ LT L V C +I+ V
Sbjct: 1259 KYSWLEQQNSKLKELAQRLNTFNAHVVL-LQDIHGCLTAWARLTGLLVDDCNEVISDV 1315
>sp|Q8I1U7|SMC3_PLAF7 Structural maintenance of chromosomes protein 3 homolog
OS=Plasmodium falciparum (isolate 3D7) GN=PFD0685c PE=3
SV=1
Length = 1193
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 26 DHLLNKLEHLWLWEQNSKLNTVFQNLE--TLSAHFCLNLTNLMPSSASFRC-LTKLRVWA 82
D+ LN++ + ++E+ L + Q L+ T LNL+N S + + KL + +
Sbjct: 219 DYFLNEINYKNIYEETQMLKSKLQELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIAS 278
Query: 83 CEHLINLVASSAAKNLVQLVHVSVSECSKITE 114
C++ +N S +N +VH+ + KI E
Sbjct: 279 CQNHLNKTISEDIQNKRNIVHLQMLIDEKIKE 310
>sp|Q6P1G2|KDM2B_MOUSE Lysine-specific demethylase 2B OS=Mus musculus GN=Kdm2b PE=1 SV=1
Length = 1309
Score = 30.8 bits (68), Expect = 6.3, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 75 LTKLRVWACEHL----INLVASSAAKNLVQLVHVSVSECSKITELVVA 118
L+KL++ C H+ INL+ + L V++S+C+K+T+L ++
Sbjct: 1213 LSKLQLSYCNHINDQSINLLTAVGTTTRDSLTEVNLSDCNKVTDLCLS 1260
>sp|O82484|DRL23_ARATH Putative disease resistance protein At4g10780 OS=Arabidopsis
thaliana GN=At4g10780 PE=2 SV=1
Length = 892
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 64 NLMPSSASFRCLTKLRVWACEHLINLVASSAAKNLVQLVHVSVSECSKITELVVASEGDA 123
N P+S F L+++ + C L +L A N+ L+ + + ++ EL+ ++
Sbjct: 732 NTNPTSPCFFNLSQVIIHVCSSLKDLTWLLFAPNITYLM---IEQLEQLQELISHAKATG 788
Query: 124 ANDE--------IIFPKLGYLELHRLQSLTTFCSANYTFKFPSLCDLSVSACPKMK 171
+E I F KL L L L L + + FP L + V CPK++
Sbjct: 789 VTEEEQQQLHKIIPFQKLQILHLSSLPELKSIYWI--SLSFPCLSGIYVERCPKLR 842
>sp|Q8L3R3|RFL1_ARATH Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1
PE=3 SV=2
Length = 885
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 19/78 (24%)
Query: 36 WLWE--------QNSKLNTVFQNLETLSAHFCLNLTNLM-----PSSASFRCLTKLRVWA 82
W+WE + + N F NL + C L +L P+ L LRVW
Sbjct: 722 WMWEIMIEKTPWKKNLTNPNFSNLSNVRIEGCDGLKDLTWLLFAPN------LINLRVWG 775
Query: 83 CEHLINLVASSAAKNLVQ 100
C+HL ++++ A ++++
Sbjct: 776 CKHLEDIISKEKAASVLE 793
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 30.4 bits (67), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 42 SKLNTVFQNLETLSAHFCLNLTN--LMPSSASFRCLTKLRVWACEHLINL-------VAS 92
++ + LE L C N+TN L+ + + L L + +C HL ++ +
Sbjct: 136 GRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTR 195
Query: 93 SAAKNLVQLVHVSVSECSKITEL 115
SAA+ + L +++ +C K+T+L
Sbjct: 196 SAAEGCLGLEQLTLQDCQKLTDL 218
>sp|Q81LI7|SYD_BACAN Aspartate--tRNA ligase OS=Bacillus anthracis GN=aspS PE=3 SV=1
Length = 591
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 99 VQLVHVSVSECSKITELVVASEGDAANDEIIFPKLGYLELHRLQSLTTF 147
VQ VSV +K T +++A + DA+ D + K YL+L R TF
Sbjct: 97 VQATKVSVLNAAKTTPIIIADDTDASED--VRLKYRYLDLRRPVMFNTF 143
>sp|C3P990|SYD_BACAA Aspartate--tRNA ligase OS=Bacillus anthracis (strain A0248) GN=aspS
PE=3 SV=1
Length = 591
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 99 VQLVHVSVSECSKITELVVASEGDAANDEIIFPKLGYLELHRLQSLTTF 147
VQ VSV +K T +++A + DA+ D + K YL+L R TF
Sbjct: 97 VQATKVSVLNAAKTTPIIIADDTDASED--VRLKYRYLDLRRPVMFNTF 143
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 42 SKLNTVFQNLETLSAHFCLNLTN--LMPSSASFRCLTKLRVWACEHLINL-------VAS 92
++ + LE L C N+TN L+ + + L L + +C HL ++ +
Sbjct: 136 GRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTR 195
Query: 93 SAAKNLVQLVHVSVSECSKITEL 115
SAA+ + L +++ +C K+T+L
Sbjct: 196 SAAEGCLGLEQLTLQDCQKLTDL 218
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 42 SKLNTVFQNLETLSAHFCLNLTN--LMPSSASFRCLTKLRVWACEHLINL-------VAS 92
++ + LE L C N+TN L+ + + L L + +C HL ++ +
Sbjct: 136 GRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTR 195
Query: 93 SAAKNLVQLVHVSVSECSKITEL 115
SAA+ + L +++ +C K+T+L
Sbjct: 196 SAAEGCLGLEQLTLQDCQKLTDL 218
>sp|C3L608|SYD_BACAC Aspartate--tRNA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL
3495) GN=aspS PE=3 SV=1
Length = 591
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 99 VQLVHVSVSECSKITELVVASEGDAANDEIIFPKLGYLELHRLQSLTTF 147
VQ VSV +K T +++A + DA+ D + K YL+L R TF
Sbjct: 97 VQATKVSVLNAAKTTPIIIADDTDASED--VRLKYRYLDLRRPVMFNTF 143
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 51 LETLSAHFCLNLTNLMPSSASFRC--LTKLRVWACEHLINLVASSAAKNLVQLVHVSVSE 108
L++L A C N+T+ + ++ C L L V C L ++ ++ A+N +L + + E
Sbjct: 249 LQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEE 308
Query: 109 CSKITE 114
C +IT+
Sbjct: 309 CVQITD 314
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 51 LETLSAHFCLNLTNLMPSSASFRC--LTKLRVWACEHLINLVASSAAKNLVQLVHVSVSE 108
L++L A C N+T+ + ++ C L L V C L ++ ++ A+N +L + + E
Sbjct: 249 LQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEE 308
Query: 109 CSKITE 114
C +IT+
Sbjct: 309 CVQITD 314
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 51 LETLSAHFCLNLTNLMPSSASFRC--LTKLRVWACEHLINLVASSAAKNLVQLVHVSVSE 108
L++L A C N+T+ + ++ C L L V C L ++ ++ A+N +L + + E
Sbjct: 249 LQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEE 308
Query: 109 CSKITE 114
C +IT+
Sbjct: 309 CVQITD 314
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,621,537
Number of Sequences: 539616
Number of extensions: 2508979
Number of successful extensions: 7238
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 7214
Number of HSP's gapped (non-prelim): 72
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)