Query 045855
Match_columns 117
No_of_seqs 40 out of 42
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 10:32:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045855.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045855hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cqea2 g.66.1.1 (A:429-457) Z 11.5 29 0.0021 18.5 0.4 8 89-96 13-20 (29)
2 d1mm0a_ g.3.7.4 (A:) Antimicro 11.4 22 0.0016 19.8 -0.2 23 69-96 5-27 (36)
3 d1bdsa_ g.9.1.1 (A:) BDs-I def 9.4 23 0.0017 20.2 -0.6 8 68-75 29-38 (43)
4 d1d2za_ a.77.1.2 (A:) Pelle de 7.4 1.1E+02 0.0082 18.1 2.1 39 61-103 19-57 (102)
5 d1kl9a1 a.60.14.1 (A:89-182) E 7.3 1.8E+02 0.013 18.3 3.2 33 57-91 57-89 (94)
6 d1icha_ a.77.1.2 (A:) Tumor ne 7.0 77 0.0056 18.3 1.1 29 65-93 9-37 (87)
7 d1k78a2 a.4.1.5 (A:82-142) Pax 6.3 69 0.005 19.3 0.6 25 73-100 26-50 (61)
8 d2gf5a1 a.77.1.2 (A:89-191) FA 6.2 1.8E+02 0.013 16.9 2.6 31 63-93 12-45 (103)
9 d1gv2a2 a.4.1.3 (A:144-190) c- 6.1 91 0.0066 16.7 1.0 14 80-93 3-16 (47)
10 d1wwha1 d.58.7.1 (A:169-249) N 5.9 89 0.0065 18.1 0.9 20 69-91 3-22 (81)
No 1
>d2cqea2 g.66.1.1 (A:429-457) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.45 E-value=29 Score=18.46 Aligned_cols=8 Identities=25% Similarity=1.082 Sum_probs=6.5
Q ss_pred hhhccccC
Q 045855 89 LRGYCDAS 96 (117)
Q Consensus 89 LrGyCd~~ 96 (117)
++|||.+.
T Consensus 13 vqGyCtrg 20 (29)
T d2cqea2 13 ITGFCARA 20 (29)
T ss_dssp TTTCCSCS
T ss_pred eeeeecCC
Confidence 68999875
No 2
>d1mm0a_ g.3.7.4 (A:) Antimicrobial peptide termicin {Termite (Pseudacanthotermes spiniger) [TaxId: 115113]}
Probab=11.38 E-value=22 Score=19.84 Aligned_cols=23 Identities=26% Similarity=0.673 Sum_probs=18.7
Q ss_pred hcchhhhhhcCCCChhhhhhhhhccccC
Q 045855 69 YNCWPAMLTFLGFTAEEGNMLRGYCDAS 96 (117)
Q Consensus 69 ~~CWP~M~~slGfT~eE~~iLrGyCd~~ 96 (117)
+.||..--...|.. +-|.|||++
T Consensus 5 ~sCWa~Cq~qh~Iy-----FrrA~Cdgs 27 (36)
T d1mm0a_ 5 QSCWATCQAQHSIY-----FRRAFCDRS 27 (36)
T ss_dssp HHHHHHHHHHSCTT-----EEEEEEETT
T ss_pred HHHHHHHHhhccEE-----EEeeeecCC
Confidence 57999888888887 668899875
No 3
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=9.40 E-value=23 Score=20.15 Aligned_cols=8 Identities=63% Similarity=1.659 Sum_probs=4.8
Q ss_pred hhcc--hhhh
Q 045855 68 TYNC--WPAM 75 (117)
Q Consensus 68 ~~~C--WP~M 75 (117)
+.|| ||++
T Consensus 29 tsncykwpni 38 (43)
T d1bdsa_ 29 TSNCYKWPNI 38 (43)
T ss_dssp CCEEEETTEE
T ss_pred ccccccCCcc
Confidence 4566 7764
No 4
>d1d2za_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=7.42 E-value=1.1e+02 Score=18.08 Aligned_cols=39 Identities=10% Similarity=0.227 Sum_probs=27.4
Q ss_pred hHHHHHhhhcchhhhhhcCCCChhhhhhhhhccccCCCCCCCc
Q 045855 61 YRAIDIITYNCWPAMLTFLGFTAEEGNMLRGYCDASFAPSPGG 103 (117)
Q Consensus 61 C~AI~~I~~~CWP~M~~slGfT~eE~~iLrGyCd~~~~pSp~~ 103 (117)
|.-++. .+.|=.+-..+||+.++-+.++-++... .||+-
T Consensus 19 ~~~Ld~--~~~Wr~LA~~Lg~~~~~I~~i~~~~~~~--~Spt~ 57 (102)
T d1d2za_ 19 CAHLDA--LDVWQQLATAVKLYPDQVEQISSQKQRG--RSASN 57 (102)
T ss_dssp HHHHHH--HTCHHHHHHHTTCCHHHHHHHHHHHHTT--CCHHH
T ss_pred HHHcCC--cccHHHHHHHhCCCHHHHHHHHhcccCC--CChHH
Confidence 444443 4569999999999999888887766543 45543
No 5
>d1kl9a1 a.60.14.1 (A:89-182) Eukaryotic initiation factor 2alpha, eIF2alpha, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.29 E-value=1.8e+02 Score=18.35 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=28.2
Q ss_pred CchhhHHHHHhhhcchhhhhhcCCCChhhhhhhhh
Q 045855 57 GSDCYRAIDIITYNCWPAMLTFLGFTAEEGNMLRG 91 (117)
Q Consensus 57 G~~CC~AI~~I~~~CWP~M~~slGfT~eE~~iLrG 91 (117)
|++.-.|+.....+ |.+|..++++.+..+.|..
T Consensus 57 g~~aydaFK~av~d--p~il~~l~l~~~vk~~L~~ 89 (94)
T d1kl9a1 57 GYGAYDAFKHAVSD--PSILDSLDLNEDEREVLIN 89 (94)
T ss_dssp THHHHHHHHHHHHC--GGGGTTSSCCHHHHHHHHH
T ss_pred CccHHHHHHHHhcC--ccccccCCCCHHHHHHHHH
Confidence 55789999988888 9999999999988887754
No 6
>d1icha_ a.77.1.2 (A:) Tumor necrosis factor receptor-1 death domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.00 E-value=77 Score=18.29 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=22.5
Q ss_pred HHhhhcchhhhhhcCCCChhhhhhhhhcc
Q 045855 65 DIITYNCWPAMLTFLGFTAEEGNMLRGYC 93 (117)
Q Consensus 65 ~~I~~~CWP~M~~slGfT~eE~~iLrGyC 93 (117)
..|...-|..+--.|||+..|-+.++--+
T Consensus 9 ~~v~~~~Wk~lar~LGls~~~i~~I~~~~ 37 (87)
T d1icha_ 9 ENVPPLRWKEFVKRLGLSDHEIDRLELQN 37 (87)
T ss_dssp HHSCSTTHHHHHHHHTCCHHHHHHHHHHC
T ss_pred HHCChHHHHHHHHHhCcCHHHHHHHHHHC
Confidence 45566679999999999998877776544
No 7
>d1k78a2 a.4.1.5 (A:82-142) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.26 E-value=69 Score=19.28 Aligned_cols=25 Identities=24% Similarity=0.546 Sum_probs=16.1
Q ss_pred hhhhhcCCCChhhhhhhhhccccCCCCC
Q 045855 73 PAMLTFLGFTAEEGNMLRGYCDASFAPS 100 (117)
Q Consensus 73 P~M~~slGfT~eE~~iLrGyCd~~~~pS 100 (117)
|.||+- --.|.-+=+|.||....||
T Consensus 26 P~iFaW---EIRd~Li~egiC~~~nvPS 50 (61)
T d1k78a2 26 PTMFAW---EIRDRLLAERVCDNDTVPS 50 (61)
T ss_dssp TTCCHH---HHHHHHHHTTSSCTTTSCC
T ss_pred CcccHH---HHHHHHHHcCCCCCCCCCc
Confidence 666653 2233344579999988877
No 8
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.22 E-value=1.8e+02 Score=16.91 Aligned_cols=31 Identities=16% Similarity=0.295 Sum_probs=22.8
Q ss_pred HHHHhhhcc---hhhhhhcCCCChhhhhhhhhcc
Q 045855 63 AIDIITYNC---WPAMLTFLGFTAEEGNMLRGYC 93 (117)
Q Consensus 63 AI~~I~~~C---WP~M~~slGfT~eE~~iLrGyC 93 (117)
.+..|.++- |..+-..|||+..+-+.++--+
T Consensus 12 ~f~~ia~~lg~~W~~La~~Lgl~~~~I~~I~~~~ 45 (103)
T d2gf5a1 12 AFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRY 45 (103)
T ss_dssp HHHHHHHSCCTTHHHHHHHTTCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHc
Confidence 444454444 9999999999998877776544
No 9
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.09 E-value=91 Score=16.71 Aligned_cols=14 Identities=21% Similarity=0.313 Sum_probs=11.0
Q ss_pred CCChhhhhhhhhcc
Q 045855 80 GFTAEEGNMLRGYC 93 (117)
Q Consensus 80 GfT~eE~~iLrGyC 93 (117)
+||.||-++|..+-
T Consensus 3 ~WT~eED~~L~~~v 16 (47)
T d1gv2a2 3 SWTEEEDRIIYQAH 16 (47)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999998887654
No 10
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.92 E-value=89 Score=18.08 Aligned_cols=20 Identities=20% Similarity=0.511 Sum_probs=13.5
Q ss_pred hcchhhhhhcCCCChhhhhhhhh
Q 045855 69 YNCWPAMLTFLGFTAEEGNMLRG 91 (117)
Q Consensus 69 ~~CWP~M~~slGfT~eE~~iLrG 91 (117)
++|| +.--||+++..+.++-
T Consensus 3 ~~~w---V~V~G~p~~~~~~il~ 22 (81)
T d1wwha1 3 DDTW---VTVFGFPQASASYILL 22 (81)
T ss_dssp GGGE---EEEECCCGGGHHHHHH
T ss_pred cccE---EEEECCChHHHHHHHH
Confidence 5788 4556888887665554
Done!