Query 045856
Match_columns 175
No_of_seqs 149 out of 1290
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 10:34:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 8.4E-44 2.9E-48 300.5 17.2 172 1-175 156-430 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 8E-40 2.7E-44 274.9 13.7 171 1-175 158-405 (421)
3 2e1v_A Acyl transferase; BAHD 100.0 7.5E-39 2.6E-43 271.1 13.2 169 1-175 168-440 (454)
4 2xr7_A Malonyltransferase; xen 100.0 5.1E-39 1.7E-43 272.0 12.0 173 1-175 163-440 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 2.7E-37 9.2E-42 261.1 13.5 172 1-175 154-435 (451)
6 1q9j_A PAPA5, polyketide synth 97.1 0.004 1.4E-07 50.6 10.5 109 1-113 122-269 (422)
7 2jgp_A Tyrocidine synthetase 3 96.5 0.018 6.1E-07 48.4 9.9 108 1-113 220-359 (520)
8 4hvm_A Tlmii; PSI-biology, mid 96.3 0.02 6.8E-07 47.8 9.1 109 1-113 140-284 (493)
9 1l5a_A Amide synthase, VIBH; n 96.1 0.035 1.2E-06 45.2 9.7 107 1-113 124-263 (436)
10 2xhg_A Tyrocidine synthetase A 95.9 0.12 4.3E-06 42.3 12.1 108 1-113 145-290 (466)
11 3fot_A 15-O-acetyltransferase; 95.4 0.094 3.2E-06 44.8 9.7 62 52-113 277-342 (519)
12 2vsq_A Surfactin synthetase su 94.6 0.22 7.5E-06 46.8 10.5 107 1-113 145-284 (1304)
13 1x93_A Hypothetical protein HP 71.6 2.9 9.8E-05 23.7 2.3 38 53-96 2-39 (55)
14 2k1o_A Putative; repressor, tr 58.5 11 0.00038 22.1 3.2 41 51-97 14-54 (66)
15 2xl1_A Arginine attenuator pep 58.3 6.4 0.00022 18.6 1.7 16 78-93 8-23 (26)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=8.4e-44 Score=300.52 Aligned_cols=172 Identities=23% Similarity=0.380 Sum_probs=149.0
Q ss_pred CCccccchhHHHHHHHHHHHHhcCCCCCCcCCccccccccCCCCCCC---------------------C-c-cCceeEEE
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVLGNIHQTLFPIWQRQILNARNPLQV---------------------L-S-DNMAHKSF 57 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~P~~dr~~l~~~~~p~~---------------------~-~-~~~~~~~f 57 (175)
+||.++||.|+.+|+++||++|||... ..+|++||++|.+++||.. . + .++..++|
T Consensus 156 ~~H~v~Dg~~~~~Fl~~wa~~~rg~~~-~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 234 (439)
T 4g22_A 156 MRHHAADGFSGLHFINSWSDMARGLDV-TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIF 234 (439)
T ss_dssp ECTTTCCHHHHHHHHHHHHHHHTTCCC-SSCCBCCGGGGCCCSSCCCSSCCGGGSCCC---------------CEEEEEE
T ss_pred eeeccCcHHHHHHHHHHHHHHhCCCCC-CCCCccccccccCCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEE
Confidence 599999999999999999999999754 5679999999987766531 0 1 45789999
Q ss_pred EeChHHHHHHhccCCCCC--CCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc----------------------
Q 045856 58 YCGPKETKALGNQLPCHL--KGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR---------------------- 113 (175)
Q Consensus 58 ~~s~~~i~~LK~~a~~~~--~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R---------------------- 113 (175)
+|++++|++||+++.++. .++||||+|+||+|||++|||+.++++.+++.++||+|
T Consensus 235 ~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~ 314 (439)
T 4g22_A 235 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPI 314 (439)
T ss_dssp EECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCE
T ss_pred EECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcc
Confidence 999999999999987653 46999999999999999999998889999999999999
Q ss_pred -------------------------------------------------------cceeeecccccCCCcccccCCccee
Q 045856 114 -------------------------------------------------------GNFIVSDISNVGLGEVNFEWKKPIY 138 (175)
Q Consensus 114 -------------------------------------------------------~~~~vssw~~~~~y~~DFGwGkP~~ 138 (175)
.++++|||+||++|++|||||||++
T Consensus 315 ~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~ 394 (439)
T 4g22_A 315 AIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIF 394 (439)
T ss_dssp EEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSE
T ss_pred eEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcce
Confidence 2578999999999999999999999
Q ss_pred eeecCC-cCeEEEEEecCCCCCCCcEEEEEeecCCCCC
Q 045856 139 AETAGA-VALISFSVKHQNKNGELGILVPICLLQSTVD 175 (175)
Q Consensus 139 ~~~~~~-~~~~~~~~~~~~~~g~~gv~V~v~L~~~~m~ 175 (175)
+++... .++.++++|.++ +++||+|.|||++++|+
T Consensus 395 ~~~~~~~~~g~~~~~p~~~--~~ggi~v~v~L~~~~m~ 430 (439)
T 4g22_A 395 MGPGGIAYEGLSFILPSPT--NDGSMSVAISLQGEHMK 430 (439)
T ss_dssp EEESSCCSTTEEEEEECTT--CSSCEEEEEEEEHHHHH
T ss_pred eeccccCCCcEEEEeecCC--CCCcEEEEEECCHHHHH
Confidence 998764 677888898653 34589999999999885
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=8e-40 Score=274.90 Aligned_cols=171 Identities=20% Similarity=0.294 Sum_probs=140.9
Q ss_pred CCccccchhHHHHHHHHHHHHhcCCCCCCcCCcccc-ccc-cC-CCCCC---CCccCceeEEEEeChHHHHHHhccCCCC
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVLGNIHQTLFPIWQR-QIL-NA-RNPLQ---VLSDNMAHKSFYCGPKETKALGNQLPCH 74 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~P~~dr-~~l-~~-~~~p~---~~~~~~~~~~f~~s~~~i~~LK~~a~~~ 74 (175)
+||.++||.|+.+|+++||++|||...+ ..|.+|| +.+ ++ +++|. ..++++..++|+|++++|++||+++.++
T Consensus 158 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~-~~P~~dr~~~l~p~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~ 236 (421)
T 2bgh_A 158 LSHKIADVLSLATFLNAWTATCRGETEI-VLPNFDLAARHFPPVDNTPSPELVPDENVVMKRFVFDKEKIGALRAQASSA 236 (421)
T ss_dssp EETTTCCHHHHHHHHHHHHHHHTTCSCC-CCCBCSHHHHHSCCCTTCCCCCCCCCSSEEEEEEEECHHHHHHHHHHTC--
T ss_pred eeEEechHHHHHHHHHHHHHHhcCCCCC-CCCccccccccCCCcccCCCCccCCccceEEEEEEECHHHHHHHHHHhhcc
Confidence 5899999999999999999999997544 6789999 644 33 34332 1235789999999999999999998765
Q ss_pred C--CCcchhHHHHHHHHHHHHHhhCC--CCCCeEEEEEEEccc-------------------------------------
Q 045856 75 L--KGCSTFDLLTAFIWKCRTIALEI--EPEKIARVSCIIKTR------------------------------------- 113 (175)
Q Consensus 75 ~--~~~St~e~l~A~iW~~~~~ar~~--~~~~~~~~~~~vd~R------------------------------------- 113 (175)
. ..+||||+|+||+|||++|||+. ++++.+++.++||+|
T Consensus 237 ~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~~~~l~~~a~~ 316 (421)
T 2bgh_A 237 SEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDLIGP 316 (421)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTCCCCGGGGHHH
T ss_pred CCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccccccHHHHHHH
Confidence 3 36999999999999999999864 356789999999999
Q ss_pred -----------------------------cceeeecccccCCCcccccCCcceeeeecCC-cCeEEEEEecCCCCCCCcE
Q 045856 114 -----------------------------GNFIVSDISNVGLGEVNFEWKKPIYAETAGA-VALISFSVKHQNKNGELGI 163 (175)
Q Consensus 114 -----------------------------~~~~vssw~~~~~y~~DFGwGkP~~~~~~~~-~~~~~~~~~~~~~~g~~gv 163 (175)
..+.+|||+||++|++|||||||+++++... .++.++++|.+ ++ +|+
T Consensus 317 ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~--~~-~gi 393 (421)
T 2bgh_A 317 LRTSLEKTEDDHNHELLKGMTCLYELEPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTR--SG-DGV 393 (421)
T ss_dssp HHHHTCCCSSCHHHHHHHHHHHHHTSCGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECT--TS-SSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecC--CC-CeE
Confidence 2378999999999999999999999998754 56778888854 32 389
Q ss_pred EEEEeecCCCCC
Q 045856 164 LVPICLLQSTVD 175 (175)
Q Consensus 164 ~V~v~L~~~~m~ 175 (175)
+|.|+|++++|+
T Consensus 394 ~v~v~L~~~~m~ 405 (421)
T 2bgh_A 394 EAWLPMAEDEMA 405 (421)
T ss_dssp EEEEEEEHHHHH
T ss_pred EEEEEcCHHHHH
Confidence 999999999885
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=7.5e-39 Score=271.10 Aligned_cols=169 Identities=20% Similarity=0.284 Sum_probs=139.0
Q ss_pred CCccccchhHHHHHHHHHHHHhc-CCC-----CCCcCCccccccccCCC-------------------CCCC-CccCcee
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVL-GNI-----HQTLFPIWQRQILNARN-------------------PLQV-LSDNMAH 54 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~r-g~~-----~~~~~P~~dr~~l~~~~-------------------~p~~-~~~~~~~ 54 (175)
+||.++||.|+.+|+++||++|| |.. .+.+.|++|| +++... ++.. .+.++..
T Consensus 168 ~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (454)
T 2e1v_A 168 NHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLR 246 (454)
T ss_dssp ECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCCCCCCCCCCEEE
T ss_pred eeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCCcchHHHHhhhccccccccCcccCCCCCCceE
Confidence 59999999999999999999999 863 1245689999 764200 0111 2346789
Q ss_pred EEEEeChHHHHHHhccCCCCC---CCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc------------------
Q 045856 55 KSFYCGPKETKALGNQLPCHL---KGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR------------------ 113 (175)
Q Consensus 55 ~~f~~s~~~i~~LK~~a~~~~---~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R------------------ 113 (175)
++|+|++++|++||+++.++. .++||||+|+||+|||++||| +++.+++.++||+|
T Consensus 247 ~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~ 323 (454)
T 2e1v_A 247 ATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGG 323 (454)
T ss_dssp EEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEEECGGGSSSCCCTTBCSCCEEE
T ss_pred EEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEEecchhccCCCCCcccccceeee
Confidence 999999999999999986432 369999999999999999999 67899999999999
Q ss_pred --------------------------------------------------------cceeeecccccCCCcccccCCcce
Q 045856 114 --------------------------------------------------------GNFIVSDISNVGLGEVNFEWKKPI 137 (175)
Q Consensus 114 --------------------------------------------------------~~~~vssw~~~~~y~~DFGwGkP~ 137 (175)
.++.+|||+||++|++|||||||+
T Consensus 324 ~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~G~P~ 403 (454)
T 2e1v_A 324 CAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGMPTTMTWVSGTPKLRFYDMDFGWGKPK 403 (454)
T ss_dssp EEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCCCSEEEEEECCTTSCGGGCCSSSCSCS
T ss_pred EEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhcCCceEEEecCCCCCcccccccCccce
Confidence 156799999999999999999999
Q ss_pred eeeecCC-cCeEEEEEecCCCCCCCcEEEEEeecCCCCC
Q 045856 138 YAETAGA-VALISFSVKHQNKNGELGILVPICLLQSTVD 175 (175)
Q Consensus 138 ~~~~~~~-~~~~~~~~~~~~~~g~~gv~V~v~L~~~~m~ 175 (175)
++++... .++.++++|.+ +|++|++|.|+|++++|+
T Consensus 404 ~v~~~~~~~~g~~~l~p~~--~~~ggi~v~v~L~~~~m~ 440 (454)
T 2e1v_A 404 KLETVSIDHNGAISINSCK--ESNEDLEIGVCISATQME 440 (454)
T ss_dssp EEEEGGGGGSSEEEEEECS--SCTTSEEEEEEEEHHHHH
T ss_pred EEEeeeeCCCCeEEEEecC--CCCCCEEEEEEECHHHHH
Confidence 9998754 56777788755 445599999999999885
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=5.1e-39 Score=271.99 Aligned_cols=173 Identities=15% Similarity=0.277 Sum_probs=141.0
Q ss_pred CCccccchhHHHHHHHHHHHHhc-CC-C---CCCcCCccccccccCCCC------------CC--C-----CccCceeEE
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVL-GN-I---HQTLFPIWQRQILNARNP------------LQ--V-----LSDNMAHKS 56 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~r-g~-~---~~~~~P~~dr~~l~~~~~------------p~--~-----~~~~~~~~~ 56 (175)
+||.++||.|+.+|+++||++|| |. . .+.+.|++||+.+.+... +. . .++++..++
T Consensus 163 ~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (453)
T 2xr7_A 163 NHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKVRGT 242 (453)
T ss_dssp ECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSCCCEE
T ss_pred eeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCCceEEE
Confidence 59999999999999999999999 86 2 134568999987753110 11 0 134577999
Q ss_pred EEeChHHHHHHhccCCCCC---CCcchhHHHHHHHHHHHHHhhCC-----CCCCeEEEEEEEccc---------------
Q 045856 57 FYCGPKETKALGNQLPCHL---KGCSTFDLLTAFIWKCRTIALEI-----EPEKIARVSCIIKTR--------------- 113 (175)
Q Consensus 57 f~~s~~~i~~LK~~a~~~~---~~~St~e~l~A~iW~~~~~ar~~-----~~~~~~~~~~~vd~R--------------- 113 (175)
|+|++++|++||+++.++. .++||||+|+||+|||++|||+. ++++.+++.++||+|
T Consensus 243 f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~ 322 (453)
T 2xr7_A 243 FIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNA 322 (453)
T ss_dssp EEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCC
T ss_pred EEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccce
Confidence 9999999999999986432 36999999999999999999975 678899999999999
Q ss_pred -------------------------------c------------------------ceeeecccccCCCcccccCCccee
Q 045856 114 -------------------------------G------------------------NFIVSDISNVGLGEVNFEWKKPIY 138 (175)
Q Consensus 114 -------------------------------~------------------------~~~vssw~~~~~y~~DFGwGkP~~ 138 (175)
. ++.||||+||++|++|||||||++
T Consensus 323 ~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFG~G~P~~ 402 (453)
T 2xr7_A 323 LVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSGSWFKEYDKVDAKRSLSVAGSPKLDLYAADFGWGRPEK 402 (453)
T ss_dssp CCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSSCTTSCCCCSCGGGEEEECSCSSCCGGGCCCSSCSCSE
T ss_pred eeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhhHHHHHHHhhccCCcEEEeccccCCccccccCCCcceE
Confidence 1 356899999999999999999999
Q ss_pred eeecCC-cCe--EEEEEecCCCCCCCcEEEEEeecCCCCC
Q 045856 139 AETAGA-VAL--ISFSVKHQNKNGELGILVPICLLQSTVD 175 (175)
Q Consensus 139 ~~~~~~-~~~--~~~~~~~~~~~g~~gv~V~v~L~~~~m~ 175 (175)
+++... .++ .++++|.+ +|++|++|.|+|++++|+
T Consensus 403 v~~~~~~~~g~~~~~l~~~~--~~~ggi~v~v~L~~~~m~ 440 (453)
T 2xr7_A 403 LEFVSIDNDDGISMSLSKSK--DSDGDLEIGLSLSKTRMN 440 (453)
T ss_dssp EEEGGGSSCSSCEEEEEECS--SSTTCEEEEECCCHHHHH
T ss_pred EEeeeecCCCceEEEEeecC--CCCCCEEEEEEeCHHHHH
Confidence 998754 456 66777754 445599999999999885
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2.7e-37 Score=261.06 Aligned_cols=172 Identities=19% Similarity=0.211 Sum_probs=137.3
Q ss_pred CCccccchhHHHHHHHHHHHHhcCCCCCC---cCCccccccccC---CCCCCC------------------CccCceeEE
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVLGNIHQT---LFPIWQRQILNA---RNPLQV------------------LSDNMAHKS 56 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~---~~P~~dr~~l~~---~~~p~~------------------~~~~~~~~~ 56 (175)
+||.++||.|+.+|+++||++|||...+. .+|++||+.+.+ +.+|.+ ..+++..++
T Consensus 154 ~~H~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
T 2rkv_A 154 GQHGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAF 233 (451)
T ss_dssp EETTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEE
T ss_pred ehhccccHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEE
Confidence 58999999999999999999999975322 257888874433 122210 124578999
Q ss_pred EEeChHHHHHHhccCCCCC----CCcchhHHHHHHHHHHHHHhh-C-CCCCCeEEEEEEEccc-----------------
Q 045856 57 FYCGPKETKALGNQLPCHL----KGCSTFDLLTAFIWKCRTIAL-E-IEPEKIARVSCIIKTR----------------- 113 (175)
Q Consensus 57 f~~s~~~i~~LK~~a~~~~----~~~St~e~l~A~iW~~~~~ar-~-~~~~~~~~~~~~vd~R----------------- 113 (175)
|+|++++|++||+++.++. .++||||+|+||+|||++||| + .++++.+++.++||+|
T Consensus 234 f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~lP~~y~GN~~~~~ 313 (451)
T 2rkv_A 234 FTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMGVSNNYPGLLQNMT 313 (451)
T ss_dssp EEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHTCCTTCCSCCEEEE
T ss_pred EEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCCCCCCCcccceeee
Confidence 9999999999999987543 359999999999999999998 3 5788999999999999
Q ss_pred -----------------------------------------------------------cceeeecccccCCCccccc--
Q 045856 114 -----------------------------------------------------------GNFIVSDISNVGLGEVNFE-- 132 (175)
Q Consensus 114 -----------------------------------------------------------~~~~vssw~~~~~y~~DFG-- 132 (175)
.++++|||+||++|++|||
T Consensus 314 ~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~g 393 (451)
T 2rkv_A 314 YHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLG 393 (451)
T ss_dssp EEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCS
T ss_pred cccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccCCC
Confidence 1377999999999999998
Q ss_pred CCcceeeeecC-C-cCeEEEEEecCCCCCCCcEEEEEeecCCCCC
Q 045856 133 WKKPIYAETAG-A-VALISFSVKHQNKNGELGILVPICLLQSTVD 175 (175)
Q Consensus 133 wGkP~~~~~~~-~-~~~~~~~~~~~~~~g~~gv~V~v~L~~~~m~ 175 (175)
||||++++.+. . .++.++++| + ++++|++|.|||++++|+
T Consensus 394 wG~P~~v~~~~~~~~~g~~~~~p-~--~~~ggi~v~v~L~~~~m~ 435 (451)
T 2rkv_A 394 LGKPETVRRPIFEPVESLMYFMP-K--KPDGEFCAALSLRDEDMD 435 (451)
T ss_dssp SCSCSEEECCBCSCCTTEEEECC-C--CTTSCEEEEEEEEHHHHH
T ss_pred CCCceEEEcCCccCCCCEEEEec-C--CCCCCEEEEEEeCHHHHH
Confidence 89999997432 2 567677775 2 234589999999999884
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=97.11 E-value=0.004 Score=50.61 Aligned_cols=109 Identities=15% Similarity=0.070 Sum_probs=68.2
Q ss_pred CCccccchhHHHHHHHHHHHHhc-----CCCCCCcC--Cccc--------c---------------ccccCCCC-CC---
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVL-----GNIHQTLF--PIWQ--------R---------------QILNARNP-LQ--- 46 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~r-----g~~~~~~~--P~~d--------r---------------~~l~~~~~-p~--- 46 (175)
+||.++||.|+..|++.+.++++ |... ..+ +..+ + .+...+-+ +.
T Consensus 122 ~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp 200 (422)
T 1q9j_A 122 LHHCMADGHHGAVLVDELFSRYTDAVTTGDPG-PITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPA 200 (422)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCC-CCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC---------
T ss_pred eceEEEchhhHHHHHHHHHHHHHHhhccCCCC-CCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCC
Confidence 59999999999999999999987 3321 111 1111 1 00000001 00
Q ss_pred -----CCccCceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc
Q 045856 47 -----VLSDNMAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR 113 (175)
Q Consensus 47 -----~~~~~~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R 113 (175)
+.........+.++++..++||+.+... .+|.+.++.|..-..+.|... .......+..+++.|
T Consensus 201 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R 269 (422)
T 1q9j_A 201 VLAHPGLPQAVPVTRLWLSKQQTSDLMAFGREH--RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLR 269 (422)
T ss_dssp ----CCSBCCCCEEEECCCHHHHHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETT
T ss_pred CCCCCCCCCCccceEEEeCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecc
Confidence 1112245678889999999999887653 578888888866555554422 234567788888888
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=96.47 E-value=0.018 Score=48.39 Aligned_cols=108 Identities=16% Similarity=0.088 Sum_probs=69.0
Q ss_pred CCccccchhHHHHHHHHHHHHhcCCCCCCcCCcc-c-----cc----------------cccCCCC----CC----CC--
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVLGNIHQTLFPIW-Q-----RQ----------------ILNARNP----LQ----VL-- 48 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~P~~-d-----r~----------------~l~~~~~----p~----~~-- 48 (175)
+||.++||.|+..|++.+.+++++...+..++.+ | +. .|....+ |. +.
T Consensus 220 ~HH~i~Dg~S~~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~ 299 (520)
T 2jgp_A 220 MHHSISDGVSSGILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQ 299 (520)
T ss_dssp EBGGGCCHHHHHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSC
T ss_pred ccceeecHhHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCC
Confidence 5999999999999999999999986322221111 1 11 1111111 10 00
Q ss_pred ccCceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc
Q 045856 49 SDNMAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR 113 (175)
Q Consensus 49 ~~~~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R 113 (175)
........+.++++..++||+.+... .+|-+.++.|..-..+.+..+ .....+..+++.|
T Consensus 300 ~~~~~~~~~~l~~~~~~~l~~~a~~~--~~T~~~~l~aa~a~~L~~~~~---~~dv~~g~~~~gR 359 (520)
T 2jgp_A 300 SFAGDQCTIGAGKALTEGLHQLAQAT--GTTLYMVLLAAYNVLLAKYAG---QEDIIVGTPITGR 359 (520)
T ss_dssp CCBEEEEEEECCHHHHHHHHHHHHHH--TCCHHHHHHHHHHHHHHHHHT---CSCEEEEEEECCC
T ss_pred CCCccEEEEeCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcC---CCCeEEEeccCCC
Confidence 12234577889999999999887543 478888887755444444433 3458899999999
No 8
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=96.29 E-value=0.02 Score=47.75 Aligned_cols=109 Identities=12% Similarity=-0.043 Sum_probs=63.6
Q ss_pred CCccccchhHHHHHHHHHHHHhcCCCCCCcCCccc-----cc--cccC---------------CCCC--C-C-CccCcee
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVLGNIHQTLFPIWQ-----RQ--ILNA---------------RNPL--Q-V-LSDNMAH 54 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~P~~d-----r~--~l~~---------------~~~p--~-~-~~~~~~~ 54 (175)
+||.++||.|+..+++.+.+.+.|...+ .+..| +. .+.. ..++ . + +......
T Consensus 140 ~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~ 217 (493)
T 4hvm_A 140 AHQMLLDARSRYMVLGAVWQAYYGRFRP--AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRGGDGGPVGPPET 217 (493)
T ss_dssp EETTTCCHHHHHHHHHHHHHHHTTCCCG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC-------CCEE
T ss_pred cchhhccHHHHHHHHHHHHHHhCCCCCC--cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCCCCCCCCCCCee
Confidence 5999999999999999999999886432 22111 11 1100 0011 0 0 0112566
Q ss_pred EEEEeChHHHHHHhccCCCCCCCcc--hhHHHHHHHHHHHHHhhC-C-------CCCCeEEEEEEEccc
Q 045856 55 KSFYCGPKETKALGNQLPCHLKGCS--TFDLLTAFIWKCRTIALE-I-------EPEKIARVSCIIKTR 113 (175)
Q Consensus 55 ~~f~~s~~~i~~LK~~a~~~~~~~S--t~e~l~A~iW~~~~~ar~-~-------~~~~~~~~~~~vd~R 113 (175)
..+.++.+..++|++.+... .+| -+.++.|.+-..+.+.+. . .......+..+++.|
T Consensus 218 ~~~~l~~~~~~~l~~~a~~~--~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR 284 (493)
T 4hvm_A 218 SRLRVPGSRWQALTEPGGPL--GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLR 284 (493)
T ss_dssp EEEEEEHHHHHHHHCC--------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHH
T ss_pred EEEEcCHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCC
Confidence 78899999999999887653 477 888887755444444310 0 335568899999999
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=96.13 E-value=0.035 Score=45.23 Aligned_cols=107 Identities=14% Similarity=0.080 Sum_probs=67.1
Q ss_pred CCccccchhHHHHHHHHHHHHhc----CCCCCCcCCccc------ccc----------------ccCCCC----CCCC--
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVL----GNIHQTLFPIWQ------RQI----------------LNARNP----LQVL-- 48 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~~P~~d------r~~----------------l~~~~~----p~~~-- 48 (175)
+||.++||.|+..|++.+.++++ |...+...+.+. +.. |....+ |...
T Consensus 124 ~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~~lp~~~~~ 203 (436)
T 1l5a_A 124 AHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQDKQFWQGYLREAPDLTLTSATYDP 203 (436)
T ss_dssp EETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTSCCCCBCCTTCCG
T ss_pred ehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHHHHHHHHHHHhcCCCCcccCCCCCCC
Confidence 59999999999999999999987 443221111110 000 111011 1111
Q ss_pred -ccCceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc
Q 045856 49 -SDNMAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR 113 (175)
Q Consensus 49 -~~~~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R 113 (175)
........+.++.+..++|++.+... .+|.+.++.|.+-..+.+..+ ....+..+++.|
T Consensus 204 ~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~L~~~~g----~dv~ig~~~~~R 263 (436)
T 1l5a_A 204 QLSHAVSLSYTLNSQLNHLLLKLANAN--QIGWPDALVALCALYLESAEP----DAPWLWLPFMNR 263 (436)
T ss_dssp GGCCEEEEEEECCHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHST----TCCEEEEEECCC
T ss_pred CcccceeeEEecCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHhhC----CceEEeeecccC
Confidence 12235678889999999999887643 478888877754444434322 457899999999
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=95.91 E-value=0.12 Score=42.32 Aligned_cols=108 Identities=12% Similarity=0.003 Sum_probs=66.1
Q ss_pred CCccccchhHHHHHHHHHHHHhc----CCCCCCcCC---cc-c-----ccc----------------c---cCCCCCCC-
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVL----GNIHQTLFP---IW-Q-----RQI----------------L---NARNPLQV- 47 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~~P---~~-d-----r~~----------------l---~~~~~p~~- 47 (175)
+||.++||.|+..|++.+.++.+ |.. +..+| .+ | +.. + ++...|..
T Consensus 145 ~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~ 223 (466)
T 2xhg_A 145 IHHLVVDGISWRILFEDLATGYAQALAGQA-ISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDY 223 (466)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSS
T ss_pred eeeeeechhhHHHHHHHHHHHHHHHHcCCC-CCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccc
Confidence 59999999999999999999875 332 11111 11 0 100 0 00000110
Q ss_pred -----CccCceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc
Q 045856 48 -----LSDNMAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR 113 (175)
Q Consensus 48 -----~~~~~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R 113 (175)
.........+.++++..++|++.+... ..+|.+.++.|-+-..+.+..+ .....+..+++.|
T Consensus 224 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~-~~~t~~~~llaa~~~~l~~~~~---~~dv~ig~~~~gR 290 (466)
T 2xhg_A 224 EVTDCKQKSVRNMRIRLHPEETEQLLKHANQA-YQTEINDLLLAALGLAFAEWSK---LAQIVIHLEGHGR 290 (466)
T ss_dssp CCSSCBGGGEEEEEEECCHHHHHHHHHTGGGT-TTCCHHHHHHHHHHHHHHHHHC---CSEEEEEEEECCC
T ss_pred cccccccccceEEEEEcCHHHHHHHHHHhHHh-hCCCHHHHHHHHHHHHHHHHhC---CCceEEEecCCCC
Confidence 012235577889999999998776432 1477788877765555545433 4457888888888
No 11
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=95.43 E-value=0.094 Score=44.79 Aligned_cols=62 Identities=13% Similarity=0.057 Sum_probs=41.7
Q ss_pred ceeEEEEeChHHHHHHhccCCCCC-CCcchhHHHHHHHHHHHHHhhC---CCCCCeEEEEEEEccc
Q 045856 52 MAHKSFYCGPKETKALGNQLPCHL-KGCSTFDLLTAFIWKCRTIALE---IEPEKIARVSCIIKTR 113 (175)
Q Consensus 52 ~~~~~f~~s~~~i~~LK~~a~~~~-~~~St~e~l~A~iW~~~~~ar~---~~~~~~~~~~~~vd~R 113 (175)
-....+.|++++.++|++.|.... ..+|-..+|.|.+=.++.+... ........+..+||+|
T Consensus 277 ~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR 342 (519)
T 3fot_A 277 PRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGR 342 (519)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECG
T ss_pred cceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeecc
Confidence 344678899999999999987641 2467777776655455544321 1223457789999999
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=94.59 E-value=0.22 Score=46.82 Aligned_cols=107 Identities=13% Similarity=0.043 Sum_probs=65.9
Q ss_pred CCccccchhHHHHHHHHHHHHhcC----CCCCCcCC--cc-c-----------------cccccCCCC----CCC---C-
Q 045856 1 MNHKMCDAFGLVQFLKASEDMVLG----NIHQTLFP--IW-Q-----------------RQILNARNP----LQV---L- 48 (175)
Q Consensus 1 ~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~~~P--~~-d-----------------r~~l~~~~~----p~~---~- 48 (175)
+||.++||.|+..+++.+.++.++ .. +..+| .+ | ++.|....+ |.. .
T Consensus 145 ~HHii~DG~S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~y~d~~~~~~~~~~~~~~~yW~~~L~~~~~~~~lp~~~~~~~ 223 (1304)
T 2vsq_A 145 YHHIILDGWCFGIVVQDLFKVYNALREQKP-YSLPPVKPYKDYIKWLEKQDKQASLRYWREYLEGFEGQTTFAEQRKKQK 223 (1304)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCCTHHHHHHHHTSCHHHHHHHHHHHHTTCCCCCTTTTTCCCSS
T ss_pred cCceeechhhHHHHHHHHHHHHHHhhcCCC-CCCCCcccHHHHHHHHhcchhhHHHHHHHHHhCCCCccccCCCCCCccc
Confidence 599999999999999999998763 22 11111 11 1 001111111 110 0
Q ss_pred -ccCceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc
Q 045856 49 -SDNMAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR 113 (175)
Q Consensus 49 -~~~~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R 113 (175)
........|.++++..++||+.+... .+|-|.++.|-.-..+.|--+ .+...+..+++.|
T Consensus 224 ~~~~~~~~~~~l~~~~~~~L~~~a~~~--~~T~~~vllaa~a~~L~r~tg---~~dvv~G~pvsgR 284 (1304)
T 2vsq_A 224 DGYEPKELLFSPSEAETKAFTELAKSQ--HTTLSTALQAVWSVLISRYQQ---SGDLAFGTVVSGR 284 (1304)
T ss_dssp CCCCEEEEEECCCHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHT---CSEEEEEEEECCC
T ss_pred cccCcceEEEecCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcC---CCCEEEEEEeCCC
Confidence 11234567789999999999887653 477788777744333334333 4568899999998
No 13
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=71.62 E-value=2.9 Score=23.74 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=28.8
Q ss_pred eeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhh
Q 045856 53 AHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIAL 96 (175)
Q Consensus 53 ~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar 96 (175)
....|+||.++-+.|++.|.++. |.+..+|=|.+.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~------eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE------ESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT------SCTTHHHHHHHHHHH
T ss_pred ceEEEEecHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Confidence 35689999999999999987654 345556677777765
No 14
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=58.55 E-value=11 Score=22.06 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=32.6
Q ss_pred CceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhC
Q 045856 51 NMAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALE 97 (175)
Q Consensus 51 ~~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~ 97 (175)
+.-...|+||.++-+.|.+.|.++. |.|..+|=|.+.++..
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE~------eSV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEEV------ESVNSFVKRHILKTII 54 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHC
T ss_pred cceEEEEEecHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
Confidence 3456789999999999999987653 5577778888888764
No 15
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=58.29 E-value=6.4 Score=18.56 Aligned_cols=16 Identities=19% Similarity=0.582 Sum_probs=13.6
Q ss_pred cchhHHHHHHHHHHHH
Q 045856 78 CSTFDLLTAFIWKCRT 93 (175)
Q Consensus 78 ~St~e~l~A~iW~~~~ 93 (175)
+++-|-++-|+||++.
T Consensus 8 ftsqdylsdhlwraln 23 (26)
T 2xl1_A 8 FTSQDYLSDHLWRALN 23 (26)
T ss_pred eecHHHHHHHHHHHHh
Confidence 5777889999999875
Done!