Query 045856
Match_columns 175
No_of_seqs 149 out of 1290
Neff 8.4
Searched_HMMs 13730
Date Mon Mar 25 10:34:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045856.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045856hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q9ja2 c.43.1.2 (A:181-418) P 71.6 6.8 0.00049 27.0 7.1 59 52-113 31-89 (238)
2 d1x93a1 a.43.1.3 (A:31-73) Unc 57.1 5.1 0.00037 19.9 2.7 38 54-97 3-40 (43)
3 d1l5aa2 c.43.1.2 (A:175-424) V 53.4 29 0.0021 23.5 8.0 58 50-113 32-89 (250)
4 d1xjha_ g.81.1.1 (A:) HSP33, C 15.4 38 0.0027 18.3 1.7 17 55-71 45-61 (62)
5 d1vzya2 g.81.1.1 (A:234-290) H 14.8 37 0.0027 18.1 1.6 18 54-71 39-56 (57)
6 d1b77a2 d.131.1.2 (A:111-228) 14.0 36 0.0026 21.2 1.5 20 53-72 2-21 (118)
7 d2axtk1 f.23.36.1 (K:10-46) Ph 10.0 64 0.0047 15.5 1.3 15 79-93 20-34 (37)
8 d2yrka1 g.37.1.4 (A:8-55) Zinc 9.8 68 0.005 16.5 1.5 22 54-75 22-43 (48)
9 d2jb0b1 d.4.1.1 (B:449-572) DN 8.8 1.3E+02 0.0095 18.7 2.9 29 60-94 29-57 (124)
10 d2gykb1 d.4.1.1 (B:4-133) DNas 8.4 1.4E+02 0.01 18.7 2.9 29 60-94 32-60 (130)
No 1
>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=71.60 E-value=6.8 Score=26.97 Aligned_cols=59 Identities=14% Similarity=0.009 Sum_probs=42.1
Q ss_pred ceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc
Q 045856 52 MAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR 113 (175)
Q Consensus 52 ~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R 113 (175)
.....+.++++..++|++.|.++ .+|.+.++.|-+=..+.+..+ ..+....+..+++.|
T Consensus 31 ~~~~~~~ls~~~t~~l~~~~~~~--~~T~~~~l~aa~~~~l~~~~~-~~~~~~~~~~~~~~r 89 (238)
T d1q9ja2 31 VPVTRLWLSKQQTSDLMAFGREH--RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLR 89 (238)
T ss_dssp CCEEEECCCHHHHHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETT
T ss_pred CceEEEEeCHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHhC-CCCcccccccccccc
Confidence 44566789999999999998754 578888888755444444434 334556778888888
No 2
>d1x93a1 a.43.1.3 (A:31-73) Uncharacterized protein HP0222 {Helicobacter pylori [TaxId: 210]}
Probab=57.09 E-value=5.1 Score=19.88 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=27.1
Q ss_pred eEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhC
Q 045856 54 HKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALE 97 (175)
Q Consensus 54 ~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~ 97 (175)
...++|+.++-++|.+.++++. |.+..+|-|.+.+|.+
T Consensus 3 avslyfsdeqyqklekmaneee------esvgsyikryilkalr 40 (43)
T d1x93a1 3 AVSLYFSDEQYQKLEKMANEEE------ESVGSYIKRYILKALR 40 (43)
T ss_dssp EEEEEECHHHHHHHHHHHHHTT------SCTTHHHHHHHHHHHT
T ss_pred ceeeEecHHHHHHHHHHhhhhH------HHHHHHHHHHHHHHHH
Confidence 4568999999999999987653 2345566666666643
No 3
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]}
Probab=53.42 E-value=29 Score=23.48 Aligned_cols=58 Identities=12% Similarity=-0.036 Sum_probs=40.2
Q ss_pred cCceeEEEEeChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHHhhCCCCCCeEEEEEEEccc
Q 045856 50 DNMAHKSFYCGPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTIALEIEPEKIARVSCIIKTR 113 (175)
Q Consensus 50 ~~~~~~~f~~s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ar~~~~~~~~~~~~~vd~R 113 (175)
.......+.++++..++|++.+... .+|-+.++.|. |..+.+ +. . .+...+..+++.|
T Consensus 32 ~~~~~~~~~l~~~~~~~l~~~a~~~--~~s~~~~l~aa-~~~~l~-~~-~-~~~~vig~~~~~R 89 (250)
T d1l5aa2 32 SHAVSLSYTLNSQLNHLLLKLANAN--QIGWPDALVAL-CALYLE-SA-E-PDAPWLWLPFMNR 89 (250)
T ss_dssp CCEEEEEEECCHHHHHHHHHHHHHT--TCCHHHHHHHH-HHHHHH-HH-S-TTCCEEEEEECCC
T ss_pred CCceEEEEEECHHHHHHHHHHHHhc--CCCHHHHHHHH-HHHHhh-hh-c-cceeeccceecCC
Confidence 3456677889999999999887643 47777777774 655543 32 2 2335688899988
No 4
>d1xjha_ g.81.1.1 (A:) HSP33, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=15.38 E-value=38 Score=18.33 Aligned_cols=17 Identities=6% Similarity=0.217 Sum_probs=14.3
Q ss_pred EEEEeChHHHHHHhccC
Q 045856 55 KSFYCGPKETKALGNQL 71 (175)
Q Consensus 55 ~~f~~s~~~i~~LK~~a 71 (175)
+.+.|++++|+.|.+.+
T Consensus 45 ~~Y~f~~~dl~~l~~~a 61 (62)
T d1xjha_ 45 NHYLFNAMDIAEIRNNA 61 (62)
T ss_dssp CEEEEEHHHHHHHTTTC
T ss_pred CEEEECHHHHHHHHHhc
Confidence 67789999999998765
No 5
>d1vzya2 g.81.1.1 (A:234-290) HSP33, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=14.82 E-value=37 Score=18.05 Aligned_cols=18 Identities=17% Similarity=0.314 Sum_probs=14.6
Q ss_pred eEEEEeChHHHHHHhccC
Q 045856 54 HKSFYCGPKETKALGNQL 71 (175)
Q Consensus 54 ~~~f~~s~~~i~~LK~~a 71 (175)
.+.+.|++++|+.|.+.+
T Consensus 39 ~~~Y~f~~~dl~~l~~~~ 56 (57)
T d1vzya2 39 NEKYLFTKEELEGLRDQT 56 (57)
T ss_dssp CCEEEEEHHHHHHHHHHC
T ss_pred CCEEEECHHHHHHHHhcc
Confidence 367889999999998764
No 6
>d1b77a2 d.131.1.2 (A:111-228) gp45 sliding clamp {Bacteriophage RB69 [TaxId: 12353]}
Probab=13.97 E-value=36 Score=21.23 Aligned_cols=20 Identities=10% Similarity=-0.144 Sum_probs=15.0
Q ss_pred eeEEEEeChHHHHHHhccCC
Q 045856 53 AHKSFYCGPKETKALGNQLP 72 (175)
Q Consensus 53 ~~~~f~~s~~~i~~LK~~a~ 72 (175)
+.-.|.++++++++|++.++
T Consensus 2 A~V~f~L~~ddl~~l~kAa~ 21 (118)
T d1b77a2 2 ASVITEIKAEDLQQLLRVSR 21 (118)
T ss_dssp CSEEEEECHHHHHHHHHHHH
T ss_pred cEEEEEeCHHHHHHHHHHHH
Confidence 34578888888888887653
No 7
>d2axtk1 f.23.36.1 (K:10-46) Photosystem II reaction center protein K, PsbK {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=9.98 E-value=64 Score=15.53 Aligned_cols=15 Identities=27% Similarity=0.611 Sum_probs=10.6
Q ss_pred chhHHHHHHHHHHHH
Q 045856 79 STFDLLTAFIWKCRT 93 (175)
Q Consensus 79 St~e~l~A~iW~~~~ 93 (175)
--|=.+.|++|++-.
T Consensus 20 Pv~f~lLafVWQAaV 34 (37)
T d2axtk1 20 PVLFLALAFVWQAAV 34 (37)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 345568899999753
No 8
>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.76 E-value=68 Score=16.53 Aligned_cols=22 Identities=5% Similarity=0.114 Sum_probs=16.4
Q ss_pred eEEEEeChHHHHHHhccCCCCC
Q 045856 54 HKSFYCGPKETKALGNQLPCHL 75 (175)
Q Consensus 54 ~~~f~~s~~~i~~LK~~a~~~~ 75 (175)
.+--.||+..|+++|..+.++.
T Consensus 22 vrdHiFskqHI~~Vk~~v~~ql 43 (48)
T d2yrka1 22 IRDHIFSKQHISKVRETVGSQL 43 (48)
T ss_dssp HHHHHTSHHHHHHHHHTTCSSC
T ss_pred hHhhhhhHHHHHHHHHHHHhHh
Confidence 3334689999999998876543
No 9
>d2jb0b1 d.4.1.1 (B:449-572) DNase domain of colicin E7 {Escherichia coli [TaxId: 562]}
Probab=8.84 E-value=1.3e+02 Score=18.70 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=21.7
Q ss_pred ChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHH
Q 045856 60 GPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTI 94 (175)
Q Consensus 60 s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ 94 (175)
+..=.++||-+ .+++||....-+|+.+.+
T Consensus 29 P~qIadkLrGr------~F~sFd~FR~afW~~Va~ 57 (124)
T d2jb0b1 29 PDRIANKLRDK------EFKSFDDFRKKFWEEVSK 57 (124)
T ss_dssp BHHHHHHHTTC------EESSHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCC------cCCCHHHHHHHHHHHHhc
Confidence 34444566643 689999999999999975
No 10
>d2gykb1 d.4.1.1 (B:4-133) DNase domain of colicin E9 {Escherichia coli [TaxId: 562]}
Probab=8.38 E-value=1.4e+02 Score=18.74 Aligned_cols=29 Identities=14% Similarity=0.287 Sum_probs=22.0
Q ss_pred ChHHHHHHhccCCCCCCCcchhHHHHHHHHHHHHH
Q 045856 60 GPKETKALGNQLPCHLKGCSTFDLLTAFIWKCRTI 94 (175)
Q Consensus 60 s~~~i~~LK~~a~~~~~~~St~e~l~A~iW~~~~~ 94 (175)
+..=.++|+-+ .+++||....-+|+.+.+
T Consensus 32 P~qIadkLrGr------~F~sFd~FR~afW~~Va~ 60 (130)
T d2gykb1 32 PDRIADKLRDK------EFKSFDDFRKAVWEEVSK 60 (130)
T ss_dssp BHHHHHHHTTC------EESSHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCC------ccCCHHHHHHHHHHHHhc
Confidence 44444666643 689999999999999975
Done!