BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045860
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/142 (56%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISII 73
YD FLSFRGEDTRK F +LY LN+KGI F+DDK+LE G +I L KAI+ES+ +I+
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 74 VLSKNYASSTWCLDELLKITECKNREDQ-IFPIFYGVEPTVVRKQTASFGEAFAEHEEFF 132
V S+NYA+S WCL+EL+KI ECK R Q + PIFY V+P+ VR Q SF +AF EHE +
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 133 RDNIEKVQKWRHALKVVANISG 154
+D++E +Q+WR AL AN+ G
Sbjct: 132 KDDVEGIQRWRIALNEAANLKG 153
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 5/147 (3%)
Query: 13 KYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
+YD F SFRGED R F+ +L L K I F DD ++E+ SI P LL AI ESRI+I
Sbjct: 11 RYDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDD-EIERSRSIGPELLSAIKESRIAI 68
Query: 73 IVLSKNYASSTWCLDELLKITEC-KNREDQIFPIFYGVEPTVVRKQTASFGEAFAEHEEF 131
++ SKNYASSTWCL+EL++I +C N + PIF+ V+ + V+KQT FG+ F E +
Sbjct: 69 VIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVFEETCKA 128
Query: 132 FRDNIEKVQKWRHALKVVANISGWELK 158
++ EK Q W+ AL VA ++G++L+
Sbjct: 129 KSED-EK-QSWKQALAAVAVMAGYDLR 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 90/143 (62%), Gaps = 4/143 (2%)
Query: 13 KYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
+YD F SFRGED R F+ +L +KGI FRDD +++ +I L AI ES+IS+
Sbjct: 10 RYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDD-HIKRSHTIGHELRAAIRESKISV 68
Query: 73 IVLSKNYASSTWCLDELLKITECKNRED-QIFPIFYGVEPTVVRKQTASFGEAFAEHEEF 131
++ S+NYASS+WCLDEL++I +CK + ++ P+FY V+P+ +RKQT FG +F E
Sbjct: 69 VLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFL--ETC 126
Query: 132 FRDNIEKVQKWRHALKVVANISG 154
E+ WR AL ANI G
Sbjct: 127 CGKTEERQHNWRRALTDAANILG 149
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query: 1 MATTSFQNISCGKYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPN 60
MA +S + F++FRG+D R GF+ +L A+ I VF D ++ G+ N
Sbjct: 1 MAASSSVRPTPTGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVV--GTDLVN 58
Query: 61 LLKAIDESRISIIVLSKNYASSTWCLDELLKITECKNRED-QIFPIFYGVEPTVVRKQTA 119
L I ESR+++++ SK+Y SS WCLDEL +I +C N+ PIFY + P+ V +
Sbjct: 59 LFVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKG 118
Query: 120 SFGEAFAEHEEFFRDNIEKVQKWRHALKVVANISGWELKDR 160
FG+ F +E ++++ E+ QKW+ AL+ + + G L ++
Sbjct: 119 GFGDTFRVLKEKYKNDPERTQKWQEALESIPKLKGLRLAEK 159
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Query: 2 ATTSFQNISCGKYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNL 61
++T I+ +Y F++FRG++ R F+G+L A+ + I VF D+ +L +G +++ L
Sbjct: 346 SSTDDHGITLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVEL-RGTNLN-YL 403
Query: 62 LKAIDESRISIIVLSKNYASSTWCLDELLKITE-CKNREDQIFPIFYGVEPTVVRKQTAS 120
+ I+ESR+++ + S+ Y S WCLDEL+K+ E + + + P+FY + T ++ +
Sbjct: 404 FRRIEESRVAVAIFSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGA 463
Query: 121 FGEAFAEHEEFFRDNIEKVQKWRHAL-KVVANI 152
FG+ E +R E++QKW+ AL V +NI
Sbjct: 464 FGDNLRNLEWEYRSEPERIQKWKEALSSVFSNI 496
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Query: 16 AFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISIIVL 75
F++FRG+D RKGF+ +L AL + I VF D++ E+ G +L I ES+I++++
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQ--EERGKYLISLFDTIGESKIALVIF 81
Query: 76 SKNYASSTWCLDELLKITECKNREDQ-IFPIFYGVEPTVVRKQTASFGEAFAEHEEFFRD 134
S+ Y S WC+DEL+KI E ++ I PIFY ++ VV+ T FG+ F + + ++
Sbjct: 82 SEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQP 141
Query: 135 NIEKVQKWRHALKVVANI 152
+K+ KW AL V +
Sbjct: 142 EPKKLHKWTEALFSVCEL 159
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 16 AFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISIIVL 75
F+ FRG D RK FI +L AL I VF D+ + GS NLL I+ES +++++
Sbjct: 17 VFICFRGADVRKHFISFLVPALREANINVFIDENEFL--GSEMANLLTRIEESELALVIF 74
Query: 76 SKNYASSTWCLDELLKITECKNREDQ----IFPIFYGVEPTVVRKQTASFGEAFAEHEEF 131
S ++ S CL+EL KI E R+DQ + PIFY V+P+ V+ FG+ F E
Sbjct: 75 SVDFTRSHRCLNELAKIKE---RKDQGRLIVIPIFYKVKPSAVKFLEGKFGDNFRALERN 131
Query: 132 FRDNIEKVQKWRHALKVVANISGWELKDR 160
R + QKW+ AL+ + G L ++
Sbjct: 132 NRHMLPITQKWKEALESIPGSIGMPLAEQ 160
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 27/149 (18%)
Query: 14 YDAFLSF-RGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
YD + + R + + + FI +L +L +GI V+ +++ A+ + R+ I
Sbjct: 668 YDVVIRYGRADISNEDFISHLRASLCRRGISVYEKFNEVD-----------ALPKCRVLI 716
Query: 73 IVLSKNYASSTWCLDELLKITECKNREDQI-FPIFYGVEPTVVRKQTASFGEAFAEHEEF 131
IVL+ Y S LL I E ++ ED++ +PIFY + P F +E F
Sbjct: 717 IVLTSTYVPSN-----LLNILEHQHTEDRVVYPIFYRLSP-------YDFVCNSKNYERF 764
Query: 132 FRDNIEKVQKWRHALKVVANISGWELKDR 160
+ + K KW+ ALK + + G+ L D+
Sbjct: 765 YLQDEPK--KWQAALKEITQMPGYTLTDK 791
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 23 EDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISIIVLSKNYASS 82
ED KG I +L L NK I VF D++++ G NL K I +S+IS+ + S++
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKG--LKNLFKRIQDSKISLAIFSESKCD- 107
Query: 83 TWCLDELLKITECKNREDQIFPIFYGVEPT 112
++LLK E D+ PIFY V+ T
Sbjct: 108 ---FNDLLKNNESA---DEAIPIFYKVDAT 131
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 23 EDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISIIVLSKNYASS 82
E+ R F+ +L AL KG+ +D ++ S+S ++ +R+S+++L N
Sbjct: 14 EEVRYSFVSHLSKALQRKGV----NDVFIDSDDSLSNESQSMVERARVSVMILPGN---R 66
Query: 83 TWCLDELLKITECKNREDQ-IFPIFYGV 109
T LD+L+K+ +C+ +DQ + P+ YGV
Sbjct: 67 TVSLDKLVKVLDCQKNKDQVVVPVLYGV 94
>sp|Q15399|TLR1_HUMAN Toll-like receptor 1 OS=Homo sapiens GN=TLR1 PE=1 SV=3
Length = 786
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 13 KYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
++ AF+S+ G D+ L L +G+ + ++ G SI N++ I++S SI
Sbjct: 636 QFHAFISYSGHDSF-WVKNELLPNLEKEGMQICLHERNFVPGKSIVENIITCIEKSYKSI 694
Query: 73 IVLSKNYASSTWCLDEL 89
VLS N+ S WC EL
Sbjct: 695 FVLSPNFVQSEWCHYEL 711
>sp|P08953|TOLL_DROME Protein toll OS=Drosophila melanogaster GN=Tl PE=1 SV=1
Length = 1097
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 13 KYDAFLSFRGEDTRKGFI-GYLYTALNNKGIYVFR---DDKQLEKGGSISPNLLKAIDES 68
K+DAF+S+ +D + FI YL L + G F+ ++ GG I N+++++ +S
Sbjct: 858 KFDAFISYSHKD--QSFIEDYLVPQLEH-GPQKFQLCVHERDWLVGGHIPENIMRSVADS 914
Query: 69 RISIIVLSKNYASSTW 84
R +IIVLS+N+ S W
Sbjct: 915 RRTIIVLSQNFIKSEW 930
>sp|Q9Y2C9|TLR6_HUMAN Toll-like receptor 6 OS=Homo sapiens GN=TLR6 PE=1 SV=2
Length = 796
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 13 KYDAFLSFRGEDT---RKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESR 69
++ AF+S+ D+ + + YL + I + ++ G SI N++ I++S
Sbjct: 641 QFHAFISYSEHDSAWVKSELVPYL----EKEDIQICLHERNFVPGKSIVENIINCIEKSY 696
Query: 70 ISIIVLSKNYASSTWCLDEL 89
SI VLS N+ S WC EL
Sbjct: 697 KSIFVLSPNFVQSEWCHYEL 716
>sp|Q9EPQ1|TLR1_MOUSE Toll-like receptor 1 OS=Mus musculus GN=Tlr1 PE=1 SV=1
Length = 795
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 13 KYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
++ AF+S+ G D+ L L I + ++ G SI N++ I++S SI
Sbjct: 639 QFHAFVSYSGHDS-AWVKNELLPNLEKDDIQICLHERNFVPGKSIVENIINFIEKSYKSI 697
Query: 73 IVLSKNYASSTWCLDEL 89
VLS ++ S WC EL
Sbjct: 698 FVLSPHFIQSEWCHYEL 714
>sp|Q704V6|TLR6_BOVIN Toll-like receptor 6 OS=Bos taurus GN=TLR6 PE=2 SV=1
Length = 793
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 13 KYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
++ AF+S+ D+ L L + I + ++ G SI N++ I++S SI
Sbjct: 641 QFHAFISYSEHDS-AWVKNELIPNLEKEDIRICLHERNFVAGKSIVENIINCIEKSYKSI 699
Query: 73 IVLSKNYASSTWCLDEL 89
VLS N+ S WC EL
Sbjct: 700 FVLSPNFVQSEWCHYEL 716
>sp|Q6IA17|SIGIR_HUMAN Single Ig IL-1-related receptor OS=Homo sapiens GN=SIGIRR PE=1 SV=3
Length = 410
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTAL--NNKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDA++S+ + F+ ++ +G +F DD+ L S +LL + R
Sbjct: 165 YDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRL 224
Query: 72 IIVLSKNYASSTWC 85
I+VLS + S WC
Sbjct: 225 IVVLSDAFLSRAWC 238
>sp|Q9JLZ8|SIGIR_MOUSE Single Ig IL-1-related receptor OS=Mus musculus GN=Sigirr PE=1 SV=2
Length = 409
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTAL--NNKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDA++S+ + F+ ++ +G +F +D+ L S +LL + R
Sbjct: 164 YDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRL 223
Query: 72 IIVLSKNYASSTWCLDELLKITECKNREDQIFPIFYGVE 110
I+VLS + S WC + + C+ E PIF E
Sbjct: 224 IVVLSDAFLSRPWC-SQSFREGLCRLLELTRRPIFITFE 261
>sp|Q4V892|SIGIR_RAT Single Ig IL-1-related receptor OS=Rattus norvegicus GN=Sigirr PE=2
SV=1
Length = 409
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTAL--NNKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDA++S+ + F+ ++ +G +F +D+ L S +LL + R
Sbjct: 164 YDAYVSYSDRPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRL 223
Query: 72 IIVLSKNYASSTWCLDELLKITECKNREDQIFPIFYGVE 110
I+VLS + WC + + C+ E PIF E
Sbjct: 224 IVVLSDAFLRRPWC-SQSFREGLCRLLELTRRPIFITFE 261
>sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens GN=TLR10 PE=1 SV=2
Length = 811
Score = 34.7 bits (78), Expect = 0.25, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 51 LEKGGSISPNLLKAIDESRISIIVLSKNYASSTWC 85
+ G SIS N++ I++S SI VLS N+ + WC
Sbjct: 672 FDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWC 706
>sp|Q9EPW9|TLR6_MOUSE Toll-like receptor 6 OS=Mus musculus GN=Tlr6 PE=1 SV=2
Length = 795
Score = 34.7 bits (78), Expect = 0.28, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 13 KYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
++ AF+S+ D+ L L I V ++ G SI N++ I++S +I
Sbjct: 641 QFHAFVSYSEHDS-AWVKNELLPNLEKDDIRVCLHERNFVPGKSIVENIINFIEKSYKAI 699
Query: 73 IVLSKNYASSTWCLDEL 89
VLS ++ S WC EL
Sbjct: 700 FVLSPHFIQSEWCHYEL 716
>sp|P58682|TLR8_MOUSE Toll-like receptor 8 OS=Mus musculus GN=Tlr8 PE=1 SV=2
Length = 1032
Score = 34.3 bits (77), Expect = 0.32, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 14 YDAFLSFRGEDTRK-----GFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDES 68
YDA++S+ +D + Y +K + + +++ + G I NL+++I++S
Sbjct: 871 YDAYISYDTKDASVTDWVINELRYHLEESEDKSVLLCLEERDWDPGLPIIDNLMQSINQS 930
Query: 69 RISIIVLSKNYASS 82
+ +I VL+K YA S
Sbjct: 931 KKTIFVLTKKYAKS 944
>sp|Q0GC71|TLR2_CAPHI Toll-like receptor 2 OS=Capra hircus GN=TLR2 PE=2 SV=1
Length = 784
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALN--NKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDAF+S+ +D+ + L N + + G I N++ +I++SR +
Sbjct: 641 YDAFVSYSEQDSY-WVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKSRKT 699
Query: 72 IIVLSKNYASSTWCLDEL 89
I VLS+N+ S WC EL
Sbjct: 700 IFVLSENFVRSEWCKYEL 717
>sp|P58753|TIRAP_HUMAN Toll/interleukin-1 receptor domain-containing adapter protein
OS=Homo sapiens GN=TIRAP PE=1 SV=2
Length = 221
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 14 YDAFLSFRGED--TRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YD + ED + + YL + + F + GG+I L +A+ S
Sbjct: 86 YDVCVCHSEEDLVAAQDLVSYLEG--STASLRCFLQLRDATPGGAIVSELCQALSSSHCR 143
Query: 72 IIVLSKNYASSTWCLDELLK-ITECKNREDQIFPIFYGV 109
+++++ + WC ++L+ +TE E P+ G+
Sbjct: 144 VLLITPGFLQDPWCKYQMLQALTEAPGAEGCTIPLLSGL 182
>sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2 PE=3 SV=1
Length = 784
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALN--NKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDAF+S+ +D+ + L N + + G I N++ +I++SR +
Sbjct: 641 YDAFVSYSEQDSY-WVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKSRKT 699
Query: 72 IIVLSKNYASSTWCLDEL 89
I VLS+N+ S WC EL
Sbjct: 700 IFVLSENFVRSEWCKYEL 717
>sp|Q689D1|TLR2_CANFA Toll-like receptor 2 OS=Canis familiaris GN=TLR2 PE=2 SV=1
Length = 785
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALN--NKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDAF+S+ D+ L L N + + G I N++ +I++SR +
Sbjct: 642 YDAFVSYSEHDSY-WVENLLVQKLEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSRKT 700
Query: 72 IIVLSKNYASSTWCLDEL 89
I VLS+N+ S WC EL
Sbjct: 701 IFVLSENFVKSEWCKYEL 718
>sp|Q8SPE9|TLR4_PONPY Toll-like receptor 4 OS=Pongo pygmaeus GN=TLR4 PE=3 SV=1
Length = 828
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 14 YDAFLSFRGED---TRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLL-KAID 66
YDAF+ + +D R + L +G+ F+ + G +I+ N++ +
Sbjct: 672 YDAFVIYSSQDEDWVRNELVKNL-----EEGVPTFQLCLHYRDFIPGVAIAANIIHEGFH 726
Query: 67 ESRISIIVLSKNYASSTWCLDELLKITE----CKNREDQIFPIFYGVEPTVVRKQT 118
+SR I+V+S+++ S WC+ E +I + +R IF + VE T++R+Q
Sbjct: 727 KSRKVIVVVSQHFIQSRWCIFE-YEIAQTWQFLSSRAGIIFIVLQKVEKTLLRQQV 781
>sp|Q9NR97|TLR8_HUMAN Toll-like receptor 8 OS=Homo sapiens GN=TLR8 PE=1 SV=1
Length = 1041
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 14 YDAFLSFRGEDTRK-----GFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDES 68
YDA++S+ +D + Y +K + + +++ + G +I NL+++I++S
Sbjct: 880 YDAYISYDTKDASVTDWVINELRYHLEESRDKNVLLCLEERDWDPGLAIIDNLMQSINQS 939
Query: 69 RISIIVLSKNYASS 82
+ ++ VL+K YA S
Sbjct: 940 KKTVFVLTKKYAKS 953
>sp|Q9TTN0|TLR4_PANPA Toll-like receptor 4 OS=Pan paniscus GN=TLR4 PE=3 SV=1
Length = 839
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 14 YDAFLSFRGED---TRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLL-KAID 66
YDAF+ + +D R + L +G+ F+ + G +I+ N++ +
Sbjct: 674 YDAFVIYSSQDEDWVRNELVKNL-----EEGVPPFQLCLHYRDFIPGVAIAANIIHEGFH 728
Query: 67 ESRISIIVLSKNYASSTWCLDELLKITE----CKNREDQIFPIFYGVEPTVVRKQT 118
+SR I+V+S+++ S WC+ E +I + +R IF + VE T++R+Q
Sbjct: 729 KSRKVIVVVSQHFIQSRWCIFE-YEIAQTWQFLSSRAGIIFIVLQKVEKTLLRRQV 783
>sp|Q99JY1|TIRAP_MOUSE Toll/interleukin-1 receptor domain-containing adapter protein
OS=Mus musculus GN=Tirap PE=2 SV=1
Length = 241
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISII 73
YD + ED Y + + F + GG+I L +A+ S +
Sbjct: 106 YDVCVCHSEEDLEAAQELVSYLEGSQASLRCFLQLRDAAPGGAIVSELCQALSRSHCRAL 165
Query: 74 VLSKNYASSTWCLDELLK-ITECKNREDQIFPIFYGV 109
+++ + WC ++L+ +TE E P+ G+
Sbjct: 166 LITPGFLRDPWCKYQMLQALTEAPASEGCTIPLLSGL 202
>sp|O00206|TLR4_HUMAN Toll-like receptor 4 OS=Homo sapiens GN=TLR4 PE=1 SV=2
Length = 839
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 14 YDAFLSFRGED---TRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLL-KAID 66
YDAF+ + +D R + L +G+ F+ + G +I+ N++ +
Sbjct: 674 YDAFVIYSSQDEDWVRNELVKNL-----EEGVPPFQLCLHYRDFIPGVAIAANIIHEGFH 728
Query: 67 ESRISIIVLSKNYASSTWCLDELLKITE----CKNREDQIFPIFYGVEPTVVRKQT 118
+SR I+V+S+++ S WC+ E +I + +R IF + VE T++R+Q
Sbjct: 729 KSRKVIVVVSQHFIQSRWCIFE-YEIAQTWQFLSSRAGIIFIVLQKVEKTLLRQQV 783
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 29/114 (25%)
Query: 10 SCGKYDAFLSFRG-EDTRKGFIGYLYTALNNKGI-----------YVFRDDK-QLEKGGS 56
+C K + F+ E+ R F+ +L AL KGI +F++ + ++EK G
Sbjct: 3 NCEKDEEFVCISCVEEVRYSFVSHLSEALRRKGINNVVVDVDIDDLLFKESQAKIEKAG- 61
Query: 57 ISPNLLKAIDESRISIIVLSKNYASSTWCLDELLKITECK--NREDQIFPIFYG 108
+S++VL N S LD+ K+ EC+ N++ + + YG
Sbjct: 62 -------------VSVMVLPGNCDPSEVWLDKFAKVLECQRNNKDQAVVSVLYG 102
>sp|Q9TSP2|TLR4_PAPAN Toll-like receptor 4 OS=Papio anubis GN=TLR4 PE=3 SV=1
Length = 826
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 14 YDAFLSFRGED---TRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLL-KAID 66
YDAF+ + +D R + L +G+ F+ + G +I+ N++ +
Sbjct: 674 YDAFVIYSSQDEDWVRNELVKNL-----EEGVPPFQLCLHYRDFIPGVAIAANIIHEGFH 728
Query: 67 ESRISIIVLSKNYASSTWCLDELLKITE----CKNREDQIFPIFYGVEPTVVRKQT 118
+SR I+V+S+++ S WC+ E +I + +R IF + VE T++R+Q
Sbjct: 729 KSRKVIVVVSQHFIQSRWCIFE-YEIAQTWQFLSSRAGIIFIVLQKVEKTLLRQQV 783
>sp|Q8SPE8|TLR4_GORGO Toll-like receptor 4 OS=Gorilla gorilla gorilla GN=TLR4 PE=3 SV=1
Length = 837
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 14 YDAFLSFRGED---TRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLL-KAID 66
YDAF+ + +D R + L +G+ F+ + G +I+ N++ +
Sbjct: 672 YDAFVIYSSQDEDWVRNELVKNL-----EEGVPPFQLCLHYRDFIPGVAIAANIIHEGFH 726
Query: 67 ESRISIIVLSKNYASSTWCLDELLKITE----CKNREDQIFPIFYGVEPTVVRKQT 118
+SR I+V+S+++ S WC+ E +I + +R IF + VE T++R+Q
Sbjct: 727 KSRKVIVVVSQHFIQSRWCIFE-YEIAQTWQFLSSRAGIIFIVLQKVEKTLLRQQV 781
>sp|Q9QUN7|TLR2_MOUSE Toll-like receptor 2 OS=Mus musculus GN=Tlr2 PE=1 SV=1
Length = 784
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALNN--KGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDAF+S+ +D+ + L N + + G I N++ +I++S +
Sbjct: 641 YDAFVSYSEQDSH-WVENLMVQQLENSDPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHKT 699
Query: 72 IIVLSKNYASSTWCLDEL 89
+ VLS+N+ S WC EL
Sbjct: 700 VFVLSENFVRSEWCKYEL 717
>sp|Q2PZH4|TLR2_BUBBU Toll-like receptor 2 OS=Bubalus bubalis GN=TLR2 PE=2 SV=1
Length = 784
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALN--NKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDAF+S+ +D+ + L N + + G I N++ +I++S +
Sbjct: 641 YDAFVSYSEQDSY-WVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKT 699
Query: 72 IIVLSKNYASSTWCLDEL 89
I VLS+N+ S WC EL
Sbjct: 700 IFVLSENFVKSEWCKYEL 717
>sp|Q9MYW3|TLR4_HORSE Toll-like receptor 4 OS=Equus caballus GN=TLR4 PE=2 SV=1
Length = 843
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Query: 14 YDAFLSFRGED---TRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLLK-AID 66
YDAF+ + +D R + L +G+ F+ + G +I+ N+++
Sbjct: 676 YDAFVIYSSQDEDWVRNELVKNL-----EEGVPPFQLCLHYRDFIPGVAIAANIIQEGFH 730
Query: 67 ESRISIIVLSKNYASSTWCLDELLKITE----CKNREDQIFPIFYGVEPTVVRKQT 118
+SR I+V+S+++ S WC+ E +I + +R IF + + +E +++R+Q
Sbjct: 731 KSRKVIVVVSQHFIQSRWCIFE-YEIAQTWQFLSSRAGIIFIVLHKLEKSLLRQQV 785
>sp|Q9DD78|TLR21_CHICK Toll-like receptor 2 type-1 OS=Gallus gallus GN=TLR2-1 PE=2 SV=1
Length = 793
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLLKAIDESRI 70
YDAF+S+ D+ ++ + + FR + G I N++ +I++S
Sbjct: 650 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 707
Query: 71 SIIVLSKNYASSTWCLDEL 89
++ VLS+++ S WC EL
Sbjct: 708 TLFVLSEHFVQSEWCKYEL 726
>sp|Q0ZUL9|TLR6_DASNO Toll-like receptor 6 OS=Dasypus novemcinctus GN=TLR6 PE=2 SV=1
Length = 789
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 13 KYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKGGSISPNLLKAIDESRISI 72
++ AF+S+ G D+ L L + I + ++ G SI N++ I++S SI
Sbjct: 640 QFHAFISYSGHDS-AWVKTELLPNLEKEDIQICLHERNFVPGKSIIENIINFIEKSYKSI 698
Query: 73 IVLSKNYASSTWCLDEL 89
VLS N+ S WC EL
Sbjct: 699 FVLSPNFVQSEWCHYEL 715
>sp|A5N5B9|GCP_CLOK5 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 /
NCIMB 10680) GN=gcp PE=3 SV=1
Length = 341
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 60 NLLKAIDESRISIIVLSKNYASSTWCLDELLKITECKNREDQIFPIFYGVEPTVVRKQTA 119
N L+A ++ I ++ AS+T CL E K KN+ D +FP EP + A
Sbjct: 257 NSLRACKLKNVNKIAVAGGVASNT-CLRETFKSQGSKNKVDVLFP-----EPILCTDNAA 310
Query: 120 SFGEAFAEHEEFFRDN 135
G A + E+ R N
Sbjct: 311 MIGS--AAYFEYMRGN 324
>sp|B9DYW7|GCP_CLOK1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Clostridium kluyveri (strain NBRC 12016) GN=gcp PE=3
SV=1
Length = 341
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 60 NLLKAIDESRISIIVLSKNYASSTWCLDELLKITECKNREDQIFPIFYGVEPTVVRKQTA 119
N L+A ++ I ++ AS+T CL E K KN+ D +FP EP + A
Sbjct: 257 NSLRACKLKNVNKIAVAGGVASNT-CLRETFKSQGSKNKVDVLFP-----EPILCTDNAA 310
Query: 120 SFGEAFAEHEEFFRDN 135
G A + E+ R N
Sbjct: 311 MIGS--AAYFEYMRGN 324
>sp|Q9DGB6|TLR22_CHICK Toll-like receptor 2 type-2 OS=Gallus gallus GN=TLR2-2 PE=2 SV=1
Length = 781
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFR---DDKQLEKGGSISPNLLKAIDESRI 70
YDAF+S+ D+ ++ + + FR + G I N++ +I++S
Sbjct: 638 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 695
Query: 71 SIIVLSKNYASSTWCLDEL 89
++ VLS+++ S WC EL
Sbjct: 696 TLFVLSEHFVQSEWCKYEL 714
>sp|Q95LA9|TLR2_BOVIN Toll-like receptor 2 OS=Bos taurus GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 54 GGSISPNLLKAIDESRISIIVLSKNYASSTWCLDEL 89
G I N++ +I++S +I VLS+N+ S WC EL
Sbjct: 682 GKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|B2LT65|TLR2_SHEEP Toll-like receptor 2 OS=Ovis aries GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALN--NKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDAF+S+ D+ + L N + + G I N++ +I++SR +
Sbjct: 641 YDAFVSYSERDSY-WVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKSRKT 699
Query: 72 IIVLSKNYASSTWCLDEL 89
I VLS+++ S WC EL
Sbjct: 700 IFVLSESFVRSEWCKYEL 717
>sp|B5T267|TLR2_BOSIN Toll-like receptor 2 OS=Bos indicus GN=TLR2 PE=3 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 54 GGSISPNLLKAIDESRISIIVLSKNYASSTWCLDEL 89
G I N++ +I++S +I VLS+N+ S WC EL
Sbjct: 682 GKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|Q6T752|TLR2_HORSE Toll-like receptor 2 OS=Equus caballus GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 14 YDAFLSFRGEDTRKGFIGYLYTALN--NKGIYVFRDDKQLEKGGSISPNLLKAIDESRIS 71
YDAF+S+ D+ + L N + + G I N++ +I++S +
Sbjct: 641 YDAFVSYSERDSY-WVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKT 699
Query: 72 IIVLSKNYASSTWCLDEL 89
I VLS+N+ S WC EL
Sbjct: 700 IFVLSENFVKSEWCKYEL 717
>sp|B2LT61|TLR2_BISBI Toll-like receptor 2 OS=Bison bison GN=TLR2 PE=3 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 54 GGSISPNLLKAIDESRISIIVLSKNYASSTWCLDEL 89
G I N++ +I++S +I VLS+N+ S WC EL
Sbjct: 682 GKWIIDNIIDSIEKSHKTIFVLSENFVXSEWCKYEL 717
>sp|Q2V897|TLR2_BOSTR Toll-like receptor 2 OS=Boselaphus tragocamelus GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 54 GGSISPNLLKAIDESRISIIVLSKNYASSTWCLDEL 89
G I N++ +I++S +I VLS+N+ S WC EL
Sbjct: 682 GKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|B2LT64|TLR2_GIRCA Toll-like receptor 2 OS=Giraffa camelopardalis GN=TLR2 PE=3 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 54 GGSISPNLLKAIDESRISIIVLSKNYASSTWCLDEL 89
G I N++ +I++S +I VLS+N+ S WC EL
Sbjct: 682 GKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYEL 717
>sp|Q9QX05|TLR4_RAT Toll-like receptor 4 OS=Rattus norvegicus GN=Tlr4 PE=2 SV=1
Length = 835
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 54 GGSISPNLLK-AIDESRISIIVLSKNYASSTWCLDELLKITE----CKNREDQIFPIFYG 108
G +I+ N+++ +SR I+V+S+++ S WC+ E +I + +R IF +
Sbjct: 713 GVAIAANIIQEGFHKSRKVIVVVSRHFIQSRWCIFE-YEIAQTWQFLSSRSGIIFIVLEK 771
Query: 109 VEPTVVRKQT 118
VE +++R+Q
Sbjct: 772 VEKSLLRQQV 781
>sp|A6LJ40|SYP_THEM4 Proline--tRNA ligase OS=Thermosipho melanesiensis (strain BI429 /
DSM 12029) GN=proS PE=3 SV=1
Length = 564
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 9 ISCGKYDAFLSFRGEDTRKGFIGYLYTALNNKGIYVFRDDKQLEKG 54
+S Y+ ++ G++ K F LY L +KG+ V DD+ + G
Sbjct: 464 VSVAPYEVVITVVGKENEKSFAEKLYRYLLDKGVDVLIDDRDVSPG 509
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,138,977
Number of Sequences: 539616
Number of extensions: 2231704
Number of successful extensions: 5212
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 5155
Number of HSP's gapped (non-prelim): 72
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)