Query 045861
Match_columns 508
No_of_seqs 267 out of 3772
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 06:16:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045861.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045861hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.6E-53 5.7E-58 463.7 35.8 473 1-478 123-621 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.3E-52 5E-57 456.3 35.6 461 1-470 98-589 (968)
3 KOG4194 Membrane glycoprotein 100.0 9.5E-43 2E-47 326.0 6.7 401 47-472 54-459 (873)
4 KOG4194 Membrane glycoprotein 100.0 3E-39 6.5E-44 302.6 5.2 398 19-442 49-452 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 4.8E-39 1E-43 288.6 -13.8 444 1-465 50-541 (565)
6 KOG0472 Leucine-rich repeat pr 100.0 7.2E-38 1.6E-42 281.0 -15.1 425 1-448 73-545 (565)
7 KOG0618 Serine/threonine phosp 100.0 3.1E-36 6.7E-41 296.8 -6.2 436 3-465 28-489 (1081)
8 KOG0444 Cytoskeletal regulator 100.0 2.9E-33 6.2E-38 264.7 -2.6 366 21-442 7-375 (1255)
9 KOG0444 Cytoskeletal regulator 100.0 2.6E-33 5.7E-38 264.9 -4.0 368 43-467 5-377 (1255)
10 KOG0618 Serine/threonine phosp 100.0 2.1E-32 4.4E-37 270.0 -7.1 436 1-463 3-463 (1081)
11 KOG4237 Extracellular matrix p 99.9 2.9E-27 6.2E-32 212.7 -0.0 295 2-322 52-359 (498)
12 PLN03210 Resistant to P. syrin 99.9 1.2E-23 2.6E-28 230.7 27.7 287 134-440 610-904 (1153)
13 PLN03210 Resistant to P. syrin 99.9 4E-23 8.6E-28 226.7 29.8 341 12-392 549-904 (1153)
14 KOG4237 Extracellular matrix p 99.9 7E-26 1.5E-30 203.8 -3.3 282 25-345 50-358 (498)
15 PRK15387 E3 ubiquitin-protein 99.8 9.2E-20 2E-24 186.3 15.1 254 2-324 207-460 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 2.2E-19 4.8E-24 183.5 16.7 161 261-446 302-462 (788)
17 cd00116 LRR_RI Leucine-rich re 99.8 2.2E-19 4.8E-24 171.9 2.5 209 256-464 76-319 (319)
18 PRK15370 E3 ubiquitin-protein 99.7 1.1E-17 2.3E-22 172.4 12.9 225 189-442 200-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 4.4E-19 9.4E-24 169.8 2.4 280 1-296 3-318 (319)
20 PRK15370 E3 ubiquitin-protein 99.7 2E-17 4.3E-22 170.4 12.8 116 21-148 178-296 (754)
21 KOG0617 Ras suppressor protein 99.6 3.5E-18 7.6E-23 137.0 -4.3 153 19-176 31-190 (264)
22 KOG0617 Ras suppressor protein 99.6 2.7E-18 5.9E-23 137.6 -5.1 177 284-466 32-213 (264)
23 KOG1909 Ran GTPase-activating 99.3 5.2E-13 1.1E-17 119.8 -0.9 190 232-441 87-310 (382)
24 KOG1909 Ran GTPase-activating 99.3 3.4E-13 7.4E-18 120.9 -2.3 247 131-418 26-311 (382)
25 PLN03150 hypothetical protein; 99.3 1.6E-11 3.6E-16 126.4 9.3 118 358-477 419-538 (623)
26 PF14580 LRR_9: Leucine-rich r 99.2 1.9E-11 4.1E-16 103.0 5.8 125 19-166 17-147 (175)
27 KOG4658 Apoptotic ATPase [Sign 99.2 1.4E-11 2.9E-16 129.7 5.4 155 19-197 521-677 (889)
28 KOG0532 Leucine-rich repeat (L 99.2 5.8E-13 1.3E-17 126.6 -5.2 167 2-201 81-247 (722)
29 KOG1259 Nischarin, modulator o 99.2 7.9E-12 1.7E-16 109.8 1.4 133 309-448 284-417 (490)
30 KOG3207 Beta-tubulin folding c 99.1 5.6E-12 1.2E-16 116.4 -0.3 209 235-444 119-341 (505)
31 PF14580 LRR_9: Leucine-rich r 99.1 3.5E-11 7.6E-16 101.4 3.9 102 1-107 24-127 (175)
32 KOG1259 Nischarin, modulator o 99.1 2.1E-11 4.5E-16 107.3 1.9 201 254-464 207-411 (490)
33 COG4886 Leucine-rich repeat (L 99.1 1.1E-10 2.3E-15 115.2 6.4 181 234-422 113-294 (394)
34 COG4886 Leucine-rich repeat (L 99.1 2.9E-10 6.4E-15 112.0 8.5 173 44-229 115-293 (394)
35 KOG3207 Beta-tubulin folding c 99.1 2.3E-11 5E-16 112.4 -0.4 209 109-346 119-339 (505)
36 KOG0532 Leucine-rich repeat (L 99.1 5.7E-12 1.2E-16 120.0 -4.5 195 236-440 74-271 (722)
37 PLN03150 hypothetical protein; 99.0 5.4E-10 1.2E-14 115.3 9.0 114 334-447 419-533 (623)
38 KOG4658 Apoptotic ATPase [Sign 99.0 1.3E-10 2.8E-15 122.4 4.2 303 4-319 531-856 (889)
39 PF13855 LRR_8: Leucine rich r 98.9 4.9E-10 1.1E-14 77.6 3.1 61 381-441 1-61 (61)
40 PF13855 LRR_8: Leucine rich r 98.9 9.5E-10 2.1E-14 76.2 3.3 60 21-80 1-60 (61)
41 KOG0531 Protein phosphatase 1, 98.7 9.7E-10 2.1E-14 108.5 -1.7 237 214-464 73-317 (414)
42 KOG0531 Protein phosphatase 1, 98.7 1.8E-09 3.9E-14 106.5 -1.4 248 185-447 69-323 (414)
43 KOG1859 Leucine-rich repeat pr 98.6 2.1E-09 4.6E-14 105.6 -4.6 180 278-467 102-294 (1096)
44 KOG2120 SCF ubiquitin ligase, 98.6 8.4E-10 1.8E-14 97.2 -7.1 178 112-319 186-373 (419)
45 KOG1859 Leucine-rich repeat pr 98.4 1.5E-09 3.2E-14 106.7 -9.9 126 310-442 165-292 (1096)
46 KOG4579 Leucine-rich repeat (L 98.4 1.8E-08 4E-13 78.5 -2.8 133 334-470 28-164 (177)
47 KOG2982 Uncharacterized conser 98.4 9.6E-08 2.1E-12 84.5 1.1 188 260-447 70-267 (418)
48 KOG2120 SCF ubiquitin ligase, 98.4 1.3E-08 2.7E-13 90.0 -4.5 180 160-346 186-376 (419)
49 COG5238 RNA1 Ran GTPase-activa 98.3 6.4E-08 1.4E-12 84.5 -1.1 252 156-442 27-316 (388)
50 COG5238 RNA1 Ran GTPase-activa 98.3 3E-07 6.5E-12 80.4 2.1 165 279-443 86-286 (388)
51 KOG4579 Leucine-rich repeat (L 98.2 8.2E-08 1.8E-12 74.9 -2.7 135 311-448 29-165 (177)
52 KOG1644 U2-associated snRNP A' 98.2 2.8E-06 6.1E-11 71.2 5.9 101 45-147 42-152 (233)
53 KOG2982 Uncharacterized conser 98.1 4.3E-07 9.2E-12 80.5 -0.9 40 158-200 70-109 (418)
54 KOG1644 U2-associated snRNP A' 98.0 1E-05 2.2E-10 67.9 5.9 99 69-169 42-150 (233)
55 PF12799 LRR_4: Leucine Rich r 98.0 5.6E-06 1.2E-10 52.3 3.0 36 382-418 2-37 (44)
56 PF13306 LRR_5: Leucine rich r 97.9 5.5E-05 1.2E-09 61.4 7.9 121 305-431 8-128 (129)
57 PF12799 LRR_4: Leucine Rich r 97.9 8.5E-06 1.9E-10 51.4 2.0 37 405-442 1-37 (44)
58 KOG3665 ZYG-1-like serine/thre 97.9 4.3E-06 9.3E-11 86.5 1.0 150 69-220 122-282 (699)
59 PRK15386 type III secretion pr 97.8 0.00017 3.6E-09 69.0 9.7 138 257-416 48-188 (426)
60 PF13306 LRR_5: Leucine rich r 97.7 0.00012 2.5E-09 59.5 7.5 122 280-407 7-128 (129)
61 PRK15386 type III secretion pr 97.7 0.00017 3.8E-09 68.9 9.5 159 233-415 48-210 (426)
62 KOG3665 ZYG-1-like serine/thre 97.7 2.3E-05 4.9E-10 81.2 3.7 138 15-166 142-282 (699)
63 KOG4341 F-box protein containi 97.7 6.9E-07 1.5E-11 82.9 -6.6 280 136-441 139-438 (483)
64 KOG4341 F-box protein containi 97.6 2.2E-06 4.8E-11 79.6 -5.8 111 235-345 318-438 (483)
65 KOG2739 Leucine-rich acidic nu 97.1 0.00028 6E-09 62.2 2.3 86 18-105 40-128 (260)
66 KOG2739 Leucine-rich acidic nu 97.0 0.00045 9.9E-09 60.8 3.0 64 41-106 39-104 (260)
67 KOG2123 Uncharacterized conser 96.7 6.9E-05 1.5E-09 66.2 -4.4 84 20-107 18-102 (388)
68 KOG2123 Uncharacterized conser 96.7 6.6E-05 1.4E-09 66.3 -4.7 87 356-446 18-105 (388)
69 KOG1947 Leucine rich repeat pr 96.5 0.00037 8E-09 70.8 -2.1 108 214-321 189-307 (482)
70 KOG1947 Leucine rich repeat pr 96.3 0.00049 1.1E-08 69.9 -2.6 238 158-418 187-440 (482)
71 PF00560 LRR_1: Leucine Rich R 94.8 0.014 3.1E-07 30.4 1.0 19 71-90 2-20 (22)
72 PF00560 LRR_1: Leucine Rich R 94.7 0.013 2.9E-07 30.5 0.7 11 408-418 3-13 (22)
73 KOG0473 Leucine-rich repeat pr 94.7 0.00064 1.4E-08 58.6 -6.8 93 11-106 32-124 (326)
74 KOG4308 LRR-containing protein 94.2 0.0002 4.4E-09 71.0 -12.6 181 239-419 89-304 (478)
75 PF13504 LRR_7: Leucine rich r 92.8 0.052 1.1E-06 26.2 0.8 13 406-418 2-14 (17)
76 KOG3864 Uncharacterized conser 92.1 0.025 5.5E-07 48.1 -1.3 79 360-438 104-185 (221)
77 smart00370 LRR Leucine-rich re 91.4 0.17 3.8E-06 27.4 2.0 15 406-420 3-17 (26)
78 smart00369 LRR_TYP Leucine-ric 91.4 0.17 3.8E-06 27.4 2.0 15 406-420 3-17 (26)
79 KOG3864 Uncharacterized conser 90.0 0.039 8.4E-07 47.0 -2.2 82 238-319 102-186 (221)
80 KOG0473 Leucine-rich repeat pr 89.9 0.0069 1.5E-07 52.5 -6.8 89 351-442 36-124 (326)
81 smart00370 LRR Leucine-rich re 89.2 0.32 7E-06 26.3 1.9 13 46-58 3-15 (26)
82 smart00369 LRR_TYP Leucine-ric 89.2 0.32 7E-06 26.3 1.9 13 46-58 3-15 (26)
83 KOG4308 LRR-containing protein 88.0 0.0031 6.7E-08 62.8 -11.8 39 237-275 262-304 (478)
84 PF13516 LRR_6: Leucine Rich r 87.1 0.11 2.4E-06 27.6 -0.9 13 406-418 3-15 (24)
85 TIGR00864 PCC polycystin catio 86.7 0.25 5.4E-06 58.2 0.7 33 411-443 1-33 (2740)
86 smart00364 LRR_BAC Leucine-ric 79.7 1.3 2.8E-05 24.0 1.3 18 429-447 2-19 (26)
87 KOG3763 mRNA export factor TAP 73.4 1.7 3.7E-05 43.2 1.3 60 43-106 216-283 (585)
88 smart00365 LRR_SD22 Leucine-ri 71.7 3.6 7.7E-05 22.4 1.7 14 405-418 2-15 (26)
89 smart00368 LRR_RI Leucine rich 65.0 4.9 0.00011 22.2 1.5 13 358-370 3-15 (28)
90 KOG3763 mRNA export factor TAP 56.7 5.2 0.00011 39.9 1.1 65 354-419 215-284 (585)
91 TIGR00864 PCC polycystin catio 55.9 5.9 0.00013 47.6 1.5 33 387-419 1-33 (2740)
92 smart00082 LRRCT Leucine rich 50.7 5.1 0.00011 25.7 -0.0 11 462-472 1-11 (51)
93 smart00367 LRR_CC Leucine-rich 50.1 12 0.00027 20.0 1.5 13 428-440 1-13 (26)
94 KOG4242 Predicted myosin-I-bin 47.9 1.2E+02 0.0027 30.1 8.6 273 135-418 165-481 (553)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.6e-53 Score=463.69 Aligned_cols=473 Identities=33% Similarity=0.536 Sum_probs=300.3
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCc
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNN 80 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (508)
|++++|+++|.+|.. .+++|++|++++|.+.+.+|..+..+++|++|++++|.+.+..|..++++++|++|++++|.
T Consensus 123 L~Ls~n~l~~~~p~~---~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 199 (968)
T PLN00113 123 LNLSNNNFTGSIPRG---SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQ 199 (968)
T ss_pred EECcCCccccccCcc---ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCC
Confidence 355666666555542 35556666666665555555555555666666666655555555555555666666665555
Q ss_pred cccCCchhccCCCCCCEeeCccccCCCC------CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChh
Q 045861 81 LIGEIPHEIGNLHNLEYLVLENNNFDGP------RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPST 154 (508)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~~~~~------~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~ 154 (508)
+.+..|..++++++|++|++++|.+.+. .+++|++|++++|.+.+..|..+.++++|++|++++|++.+..|..
T Consensus 200 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 279 (968)
T PLN00113 200 LVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPS 279 (968)
T ss_pred CcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchh
Confidence 5555555555555555555555555432 3455555555555555555555555555555555555555555555
Q ss_pred hcCCCCCCEEeCCCCcCcCCCCCC-------------------cccccccCCCCCCEEEccCccCccCCChhhhhccccc
Q 045861 155 IANLRNLQWLDLSFNYLTSSTSEL-------------------SFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSL 215 (508)
Q Consensus 155 ~~~l~~L~~L~l~~n~~~~~~~~~-------------------~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L 215 (508)
+..+++|++|++++|.+....... .....+..+++|+.|++++|.+.+..|..+.... +|
T Consensus 280 l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~-~L 358 (968)
T PLN00113 280 IFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN-NL 358 (968)
T ss_pred HhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCC-CC
Confidence 555555555555555443311100 0012233444445555555444444444444443 45
Q ss_pred CeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCc
Q 045861 216 EYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDN 295 (508)
Q Consensus 216 ~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 295 (508)
+.|++++|.+.+.+|..+..+++|+.+++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|
T Consensus 359 ~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 438 (968)
T PLN00113 359 TVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNN 438 (968)
T ss_pred cEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCC
Confidence 55555555544444444444555555555555555445555555555555555555555555555555566666666666
Q ss_pred eeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccch
Q 045861 296 KLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPT 375 (508)
Q Consensus 296 ~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 375 (508)
.+.+..+..+..+++|+.|++++|.+.+..+..+ ..++|+.|++++|++.+..|..+..+++|+.|++++|.+.+..|.
T Consensus 439 ~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 517 (968)
T PLN00113 439 NLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPD 517 (968)
T ss_pred cccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCCh
Confidence 5555555555556666666666666655544433 346777888888888877888888888999999999999888888
Q ss_pred hhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCccccCCCC
Q 045861 376 VIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSGESFANFS 455 (508)
Q Consensus 376 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~ 455 (508)
.+..+++|++|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.+++++|++.+.+|....+..+.
T Consensus 518 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~ 597 (968)
T PLN00113 518 ELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAIN 597 (968)
T ss_pred HHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccC
Confidence 88899999999999999998889889999999999999999998889889999999999999999999999888888888
Q ss_pred cccccCCCCCCCCC-CCCCCCCCC
Q 045861 456 DNSFMGNSFLCGSP-NLQVPPRKD 478 (508)
Q Consensus 456 ~l~l~~n~~~c~~~-~~~~~~~~~ 478 (508)
...+.+||.+|+-+ ....++|..
T Consensus 598 ~~~~~~n~~lc~~~~~~~~~~c~~ 621 (968)
T PLN00113 598 ASAVAGNIDLCGGDTTSGLPPCKR 621 (968)
T ss_pred hhhhcCCccccCCccccCCCCCcc
Confidence 88899999999743 233466753
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.3e-52 Score=456.25 Aligned_cols=461 Identities=36% Similarity=0.542 Sum_probs=375.6
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCc
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNN 80 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (508)
|+|++|+++|.+|.++|..+++|++|++++|.+++.+|. ..+++|++|++++|.+++..|..++.+++|++|++++|.
T Consensus 98 L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 175 (968)
T PLN00113 98 INLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV 175 (968)
T ss_pred EECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCc
Confidence 588999999999999988999999999999999887775 468999999999999998899999999999999999999
Q ss_pred cccCCchhccCCCCCCEeeCccccCCCC------CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChh
Q 045861 81 LIGEIPHEIGNLHNLEYLVLENNNFDGP------RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPST 154 (508)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~~~~~------~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~ 154 (508)
+.+..|..+.++++|++|++++|.+.+. .+++|++|++++|.+.+..|..+.++++|++|++++|.+.+.+|..
T Consensus 176 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 255 (968)
T PLN00113 176 LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS 255 (968)
T ss_pred ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChh
Confidence 9889999999999999999999998754 6789999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhh
Q 045861 155 IANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIG 234 (508)
Q Consensus 155 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~ 234 (508)
++.+++|++|++++|.+.... ...+..+++|+.|++++|.+.+..|..+.... +|++|++.+|.+.+..|..+.
T Consensus 256 l~~l~~L~~L~L~~n~l~~~~-----p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~l~~n~~~~~~~~~~~ 329 (968)
T PLN00113 256 LGNLKNLQYLFLYQNKLSGPI-----PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQ-NLEILHLFSNNFTGKIPVALT 329 (968)
T ss_pred HhCCCCCCEEECcCCeeeccC-----chhHhhccCcCEEECcCCeeccCCChhHcCCC-CCcEEECCCCccCCcCChhHh
Confidence 999999999999999876521 13455666777777777776666666665554 666666666666666666666
Q ss_pred cCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCcc------------------------ccchhhhCCCCCcEE
Q 045861 235 NLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEG------------------------SIPDSLCNLGRLVEL 290 (508)
Q Consensus 235 ~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~------------------------~~~~~~~~l~~L~~L 290 (508)
.+++|+.|++++|.+.+..|..++.+++|+.|++++|.+.+ ..|..+..+++|+.|
T Consensus 330 ~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L 409 (968)
T PLN00113 330 SLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRV 409 (968)
T ss_pred cCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEE
Confidence 66666666666666665555555555555555555555544 444445555666666
Q ss_pred EeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCC
Q 045861 291 QFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLS 370 (508)
Q Consensus 291 ~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 370 (508)
++++|.+++..|..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+.+.+|..+ ..++|+.|++++|++.
T Consensus 410 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~ 488 (968)
T PLN00113 410 RLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFS 488 (968)
T ss_pred ECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccC
Confidence 666666666666666666666666666666666666666667777777777777766666544 3578889999999999
Q ss_pred CccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCc-c
Q 045861 371 DSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSG-E 449 (508)
Q Consensus 371 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~-~ 449 (508)
+..|..+..+++|+.|++++|.+++.+|..+..+++|++|++++|.+++.+|..+..+++|+.|++++|++++.+|.. .
T Consensus 489 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 568 (968)
T PLN00113 489 GAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG 568 (968)
T ss_pred CccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHh
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999999986 4
Q ss_pred ccCCCCcccccCCCCCCCCCC
Q 045861 450 SFANFSDNSFMGNSFLCGSPN 470 (508)
Q Consensus 450 ~~~~l~~l~l~~n~~~c~~~~ 470 (508)
.+.+|+.+++++|+..+..|.
T Consensus 569 ~l~~L~~l~ls~N~l~~~~p~ 589 (968)
T PLN00113 569 NVESLVQVNISHNHLHGSLPS 589 (968)
T ss_pred cCcccCEEeccCCcceeeCCC
Confidence 578899999999998887774
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-43 Score=325.99 Aligned_cols=401 Identities=22% Similarity=0.253 Sum_probs=334.0
Q ss_pred CcEEEcccCCCCCCCCcccCCC--CCCCeEEccCCccccCCchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCCccc
Q 045861 47 LIAISLSHNQLTGLIPRDIGNL--TSARALLLGNNNLIGEIPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERNNFS 124 (508)
Q Consensus 47 L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~ 124 (508)
-+.|+.+++.+.......+.+. ..-+.|++++|++..+.+..|.++++|+.+.+..|.++
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt------------------ 115 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT------------------ 115 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh------------------
Confidence 4567777777765544444443 23455888888888888888888888888888888776
Q ss_pred ccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCC
Q 045861 125 GTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGIL 204 (508)
Q Consensus 125 ~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~ 204 (508)
.+|.......+|+.|+|.+|.|+..-...++.++.|+.||++.|.++.++. ..|..-.++++|++++|.++...
T Consensus 116 -~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~-----~sfp~~~ni~~L~La~N~It~l~ 189 (873)
T KOG4194|consen 116 -RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPK-----PSFPAKVNIKKLNLASNRITTLE 189 (873)
T ss_pred -hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccC-----CCCCCCCCceEEeeccccccccc
Confidence 566666666677777777777776666667777777777777777766543 33444456777788777777777
Q ss_pred ChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCC
Q 045861 205 PSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNL 284 (508)
Q Consensus 205 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l 284 (508)
...|..+. +|..|.++.|+++...+..|.++++|+.|++..|.+....-..|.++++|+.|.+..|.+...-...|..+
T Consensus 190 ~~~F~~ln-sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l 268 (873)
T KOG4194|consen 190 TGHFDSLN-SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGL 268 (873)
T ss_pred cccccccc-hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeee
Confidence 77777776 77788888888777777778889999999999999885546678999999999999999987777889999
Q ss_pred CCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEEC
Q 045861 285 GRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDL 364 (508)
Q Consensus 285 ~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 364 (508)
.++++|+|..|++......++.++++|+.|++++|.|..+-...+..+++|++|+|+.|+++...+..+..++.|++|.|
T Consensus 269 ~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnL 348 (873)
T KOG4194|consen 269 EKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNL 348 (873)
T ss_pred cccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcc
Confidence 99999999999999888889999999999999999999999999999999999999999999888999999999999999
Q ss_pred CCCcCCCccchhhhcCCCCCEEECcCCcccccC---cccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcc
Q 045861 365 SRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSI---PESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRL 441 (508)
Q Consensus 365 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~---~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l 441 (508)
++|++......+|.++++|++|+|+.|.++..+ ...|.++++|+.|++.||++....-.+|.++++|++|++.+|.+
T Consensus 349 s~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~Nai 428 (873)
T KOG4194|consen 349 SHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAI 428 (873)
T ss_pred cccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcc
Confidence 999999777778999999999999999988544 36678899999999999999987778999999999999999999
Q ss_pred eecCCCccccCCCCcccccCCCCCCCCCCCC
Q 045861 442 KGEIPSGESFANFSDNSFMGNSFLCGSPNLQ 472 (508)
Q Consensus 442 ~~~~p~~~~~~~l~~l~l~~n~~~c~~~~~~ 472 (508)
.+.-|.+.....|+++.+..-.++|||.+.+
T Consensus 429 aSIq~nAFe~m~Lk~Lv~nSssflCDCql~W 459 (873)
T KOG4194|consen 429 ASIQPNAFEPMELKELVMNSSSFLCDCQLKW 459 (873)
T ss_pred eeecccccccchhhhhhhcccceEEeccHHH
Confidence 9777777666689999998888999998654
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=302.58 Aligned_cols=398 Identities=22% Similarity=0.217 Sum_probs=248.9
Q ss_pred CCCCC-cEEecCCCcCCCCCCcCCcCC--CCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCC
Q 045861 19 HLPRL-QALDINNNHVTGPVPRNLWQC--QELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNL 95 (508)
Q Consensus 19 ~~~~L-~~L~l~~~~~~~~~~~~~~~~--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 95 (508)
.|+.. +.|+.+...+...-...+.+. +.-++|++++|++..+.+..|.++++|+.+++..|.++ .+|.......+|
T Consensus 49 ~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl 127 (873)
T KOG4194|consen 49 TCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHL 127 (873)
T ss_pred cCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccce
Confidence 34433 457888888775433334433 44566999999999888888899999999999999888 778777777778
Q ss_pred CEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCC
Q 045861 96 EYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSST 175 (508)
Q Consensus 96 ~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 175 (508)
+.|+|.+|.|+.+ -.+.+..++.|+.|||+.|.|+......|..-.++++|++++|.++.+.
T Consensus 128 ~~L~L~~N~I~sv------------------~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~ 189 (873)
T KOG4194|consen 128 EKLDLRHNLISSV------------------TSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLE 189 (873)
T ss_pred eEEeeeccccccc------------------cHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccc
Confidence 8888888888753 2233444555555555555555333333444445555555555555443
Q ss_pred CCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCc
Q 045861 176 SELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPI 255 (508)
Q Consensus 176 ~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~ 255 (508)
. ..|.++.+|..|.++.|.++...+..|..++ +|+.|++..|++.-.--..|..+++|+.|.+..|++......
T Consensus 190 ~-----~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~-~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG 263 (873)
T KOG4194|consen 190 T-----GHFDSLNSLLTLKLSRNRITTLPQRSFKRLP-KLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDG 263 (873)
T ss_pred c-----ccccccchheeeecccCcccccCHHHhhhcc-hhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCc
Confidence 2 3345555555555555555544444444444 555555555554433233455666666666666666655555
Q ss_pred cccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCC
Q 045861 256 SLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDI 335 (508)
Q Consensus 256 ~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L 335 (508)
.|..+.++++|++..|.+.......+.+++.|+.|+++.|.|...-+..+..+++|++|++++|+++...++.|..+..|
T Consensus 264 ~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L 343 (873)
T KOG4194|consen 264 AFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQL 343 (873)
T ss_pred ceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHh
Confidence 66666666666666666665555556666666666666666665555556666666666666666666666666666666
Q ss_pred cEEEccCCccccccCccccCCCCCcEEECCCCcCCCc---cchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEEC
Q 045861 336 LVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDS---IPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDL 412 (508)
Q Consensus 336 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 412 (508)
++|+|+.|.+......+|..+++|++|||++|.+... ....|.++++|+.|.+.+|++..+...+|.++..|+.|||
T Consensus 344 e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL 423 (873)
T KOG4194|consen 344 EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDL 423 (873)
T ss_pred hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecC
Confidence 6666666666655555666666666666666665532 2234566667777777777666554566666667777777
Q ss_pred CCCcccccCcccccCCCCCCEEeCCCCcce
Q 045861 413 SNNSFSGFIPRSFEKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 413 ~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~ 442 (508)
.+|.|.+.-+++|..+ .|++|-+..-.+.
T Consensus 424 ~~NaiaSIq~nAFe~m-~Lk~Lv~nSssfl 452 (873)
T KOG4194|consen 424 GDNAIASIQPNAFEPM-ELKELVMNSSSFL 452 (873)
T ss_pred CCCcceeecccccccc-hhhhhhhcccceE
Confidence 7776666666666666 6666655544443
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.8e-39 Score=288.57 Aligned_cols=444 Identities=28% Similarity=0.405 Sum_probs=277.8
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCc
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNN 80 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (508)
+++++|.+. .+..++ .++..+++|++++|.+. ..|.+++.+..++.++.++|++. .+|+.++.+.+|+.++.++|.
T Consensus 50 lils~N~l~-~l~~dl-~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~ 125 (565)
T KOG0472|consen 50 LILSHNDLE-VLREDL-KNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNE 125 (565)
T ss_pred hhhccCchh-hccHhh-hcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccc
Confidence 356677776 666666 67777777777777776 56666777777777777777776 556777777777777777777
Q ss_pred cccCCchhccCCCCCCEeeCccccCCCC-----CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhh
Q 045861 81 LIGEIPHEIGNLHNLEYLVLENNNFDGP-----RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTI 155 (508)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~~~~~-----~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~ 155 (508)
+. ..++.++++..++.++..+|++... .+.++..+++.+|.+. ..|....+++.|++++...|.+. .+|..+
T Consensus 126 ~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~-tlP~~l 202 (565)
T KOG0472|consen 126 LK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE-TLPPEL 202 (565)
T ss_pred ee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-cCChhh
Confidence 76 6666777777777777777776644 3445555666666655 34444444666666666666555 555556
Q ss_pred cCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhc
Q 045861 156 ANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGN 235 (508)
Q Consensus 156 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 235 (508)
+.+.+|+-|++..|++..++ .|.+|..|+++.+..|.+. ..|.......+++..|++.+|++. ..|+.+.-
T Consensus 203 g~l~~L~~LyL~~Nki~~lP-------ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 203 GGLESLELLYLRRNKIRFLP-------EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred cchhhhHHHHhhhcccccCC-------CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 66666666666666554433 3555666666666655554 444444433336666666666655 44555555
Q ss_pred CCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCC---CcEE-------EeeCceee----eeC
Q 045861 236 LINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGR---LVEL-------QFYDNKLF----GSI 301 (508)
Q Consensus 236 l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~---L~~L-------~L~~n~~~----~~~ 301 (508)
+.+|..||+++|.++ ..|..++++ .|+.|.+.+|.+... ...+-+.+. |++| .++...-+ ...
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTi-Rr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~ 350 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTI-RREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTL 350 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHH-HHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCC
Confidence 666666666666665 345556665 566666666655311 000000000 0000 00000000 000
Q ss_pred C----cccCCCCCCCEEEcCCCcccccCCccccCcc--CCcEEEccCCccc-----------------------cccCcc
Q 045861 302 P----ACIGKLSPLRNLLLHSNVLTYVIPSTFLSLR--DILVFNFSSNSLN-----------------------GSLPLD 352 (508)
Q Consensus 302 ~----~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~--~L~~L~L~~n~l~-----------------------~~~~~~ 352 (508)
+ .....+-+.++|++++-+++.++.+.|.... -.+.++++.|++. +.+|..
T Consensus 351 ~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~ 430 (565)
T KOG0472|consen 351 PSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLE 430 (565)
T ss_pred CCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHH
Confidence 0 0011123455555555555544444433222 1344444444432 256666
Q ss_pred ccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCC
Q 045861 353 IGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLE 432 (508)
Q Consensus 353 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 432 (508)
+..+++|..|++++|.+. .+|..++.+..|+.|+++.|++. ..|.++..+..++.+-.++|++....+..+.++.+|.
T Consensus 431 l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~ 508 (565)
T KOG0472|consen 431 LSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLT 508 (565)
T ss_pred HHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcc
Confidence 778888999999999888 57877888888999999999887 7888887777888888888999977777799999999
Q ss_pred EEeCCCCcceecCCCccccCCCCcccccCCCCC
Q 045861 433 YLNLSFNRLKGEIPSGESFANFSDNSFMGNSFL 465 (508)
Q Consensus 433 ~L~l~~n~l~~~~p~~~~~~~l~~l~l~~n~~~ 465 (508)
+||+.+|.+....|..+.+.+++++.++|||+.
T Consensus 509 tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 509 TLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred eeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 999999999854445578999999999999875
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.2e-38 Score=281.00 Aligned_cols=425 Identities=25% Similarity=0.356 Sum_probs=334.3
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCc
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNN 80 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (508)
|++.+|+++ ++|..+ ..+..++.++.++|++. .+|..+..+..|+.++.++|.+. ..|+.++.+..|..++..+|+
T Consensus 73 l~~~~n~l~-~lp~ai-g~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~ 148 (565)
T KOG0472|consen 73 LNVHDNKLS-QLPAAI-GELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQ 148 (565)
T ss_pred EEeccchhh-hCCHHH-HHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccc
Confidence 356778888 788888 77888888888888887 77888888888888888888887 556788888888888888888
Q ss_pred cccCCchhccCCCCCCEeeCccccCCCC-----CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhh
Q 045861 81 LIGEIPHEIGNLHNLEYLVLENNNFDGP-----RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTI 155 (508)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~~~~~-----~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~ 155 (508)
+. ..|..+..+.++..+++.+|++... .+..|++|+...|-++ .+|..++.+.+|..|++..|++. .+| .|
T Consensus 149 i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef 224 (565)
T KOG0472|consen 149 IS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EF 224 (565)
T ss_pred cc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CC
Confidence 87 7788888888888888888887765 5677888888888877 88999999999999999999998 666 68
Q ss_pred cCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhc
Q 045861 156 ANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGN 235 (508)
Q Consensus 156 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 235 (508)
..+..|++++++.|.+..++. +....++++.+|++..|++. ..|+.++-.. +|++|++++|.++ .+|..+++
T Consensus 225 ~gcs~L~Elh~g~N~i~~lpa-----e~~~~L~~l~vLDLRdNklk-e~Pde~clLr-sL~rLDlSNN~is-~Lp~sLgn 296 (565)
T KOG0472|consen 225 PGCSLLKELHVGENQIEMLPA-----EHLKHLNSLLVLDLRDNKLK-EVPDEICLLR-SLERLDLSNNDIS-SLPYSLGN 296 (565)
T ss_pred CccHHHHHHHhcccHHHhhHH-----HHhcccccceeeeccccccc-cCchHHHHhh-hhhhhcccCCccc-cCCccccc
Confidence 889999999999998877665 34667888999999999988 6677777776 8999999999887 56677888
Q ss_pred CCCCcEEEcccCccccccCc-----------------------------------------cccCCCCCCcEEccCCcCc
Q 045861 236 LINLITMSLGINKLTGSIPI-----------------------------------------SLGKLQKLQGLYLYKNKLE 274 (508)
Q Consensus 236 l~~L~~L~l~~~~~~~~~~~-----------------------------------------~l~~~~~L~~L~l~~n~l~ 274 (508)
+ .|+.|-+.+|.+..+-.+ ....+.+.+.|++++-+++
T Consensus 297 l-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt 375 (565)
T KOG0472|consen 297 L-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT 375 (565)
T ss_pred c-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc
Confidence 8 888898888865321000 0011224566666666666
Q ss_pred cccchhhhCCC--CCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCcc
Q 045861 275 GSIPDSLCNLG--RLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLD 352 (508)
Q Consensus 275 ~~~~~~~~~l~--~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 352 (508)
....+.|.... -+..+++++|++. .+|..+..+..+.+.-+..++..+..+..+..+++|+.|++++|.+. .+|..
T Consensus 376 ~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e 453 (565)
T KOG0472|consen 376 LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEE 453 (565)
T ss_pred cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchh
Confidence 33333333221 2677788888774 55655555555544444444444466777889999999999999998 78888
Q ss_pred ccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCC
Q 045861 353 IGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLE 432 (508)
Q Consensus 353 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 432 (508)
+..+-.|+.|+++.|+|. ..|..+..+..++.+-.++|++....+..+.+|.+|..||+.+|.+. .+|..++++.+|+
T Consensus 454 ~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~ 531 (565)
T KOG0472|consen 454 MGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLR 531 (565)
T ss_pred hhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhcccccee
Confidence 888889999999999998 78988888888888888999998666677999999999999999999 6777899999999
Q ss_pred EEeCCCCcceecCCCc
Q 045861 433 YLNLSFNRLKGEIPSG 448 (508)
Q Consensus 433 ~L~l~~n~l~~~~p~~ 448 (508)
+|+++||+|. .|..
T Consensus 532 hLeL~gNpfr--~Pr~ 545 (565)
T KOG0472|consen 532 HLELDGNPFR--QPRH 545 (565)
T ss_pred EEEecCCccC--CCHH
Confidence 9999999998 4544
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-36 Score=296.78 Aligned_cols=436 Identities=26% Similarity=0.342 Sum_probs=310.6
Q ss_pred ecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccc
Q 045861 3 FANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLI 82 (508)
Q Consensus 3 l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 82 (508)
++.|-+- ..|-++-++.-+|+.|++++|.+. ..|..+..+.+|+.|+++.|-+. ..|.....+.+|++++|.+|++.
T Consensus 28 ~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~ 104 (1081)
T KOG0618|consen 28 LRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ 104 (1081)
T ss_pred ccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh
Confidence 4444443 333333344445777777777776 66777777777777777777666 34566667777777777777666
Q ss_pred cCCchhccCCCCCCEeeCccccCCCC------------------------CCCCCCEEEccCCcccccCCccccCCCCCc
Q 045861 83 GEIPHEIGNLHNLEYLVLENNNFDGP------------------------RHSNLERLYLERNNFSGTIPSFIFNASKLS 138 (508)
Q Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~~~~~------------------------~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~ 138 (508)
..|..+..+++|++|+++.|.+... +-..++.+++..+.+.+.++.++..+++
T Consensus 105 -~lP~~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~-- 181 (1081)
T KOG0618|consen 105 -SLPASISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH-- 181 (1081)
T ss_pred -cCchhHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--
Confidence 6777777777777777777776544 2223556666666666666666665555
Q ss_pred EEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCee
Q 045861 139 ILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYI 218 (508)
Q Consensus 139 ~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L 218 (508)
.++++.|.+.. ..+..+.+|+.+....|++..+.. .-++++.|+.+.|.++...+ ...+.+++++
T Consensus 182 ~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~~---------~g~~l~~L~a~~n~l~~~~~---~p~p~nl~~~ 246 (1081)
T KOG0618|consen 182 QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELEI---------SGPSLTALYADHNPLTTLDV---HPVPLNLQYL 246 (1081)
T ss_pred eeecccchhhh---hhhhhccchhhhhhhhcccceEEe---------cCcchheeeeccCcceeecc---ccccccceee
Confidence 67777777651 224566777777777776655321 22668888888887773322 2334589999
Q ss_pred EccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceee
Q 045861 219 YMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLF 298 (508)
Q Consensus 219 ~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~ 298 (508)
+++++.+.+ +|.|+..+.+|+.++...|.++ ..|..+...++|+.|.+..|.+. .+|....++.+|++|++..|.+.
T Consensus 247 dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~ 323 (1081)
T KOG0618|consen 247 DISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP 323 (1081)
T ss_pred ecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc
Confidence 999998884 5589999999999999999996 67778888899999999999988 66777788999999999999886
Q ss_pred eeCCcccCCCC-CCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhh
Q 045861 299 GSIPACIGKLS-PLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVI 377 (508)
Q Consensus 299 ~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 377 (508)
...+..+.... +|+.|..+.|.+.......=...+.|+.|++.+|.++......+.++.+|+.|+|++|++.......+
T Consensus 324 ~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~ 403 (1081)
T KOG0618|consen 324 SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKL 403 (1081)
T ss_pred ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHH
Confidence 33333333333 36777777777765554444456778888888888887766677888888888888888885444557
Q ss_pred hcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCccee-cCCCccccCCCCc
Q 045861 378 GGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKG-EIPSGESFANFSD 456 (508)
Q Consensus 378 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~ 456 (508)
.+++.|+.|+|+||+++ .+|..+..++.|++|...+|++. ..| .+..++.|+.+|++.|+++. .+|....-++|+.
T Consensus 404 ~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~Lky 480 (1081)
T KOG0618|consen 404 RKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKY 480 (1081)
T ss_pred hchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccce
Confidence 78888888888888888 67788888888888888888888 455 67788888888888888763 3444434477888
Q ss_pred ccccCCCCC
Q 045861 457 NSFMGNSFL 465 (508)
Q Consensus 457 l~l~~n~~~ 465 (508)
++++||+|.
T Consensus 481 LdlSGN~~l 489 (1081)
T KOG0618|consen 481 LDLSGNTRL 489 (1081)
T ss_pred eeccCCccc
Confidence 888888863
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=2.9e-33 Score=264.70 Aligned_cols=366 Identities=27% Similarity=0.417 Sum_probs=182.5
Q ss_pred CCCcEEecCCCcCC-CCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEee
Q 045861 21 PRLQALDINNNHVT-GPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLV 99 (508)
Q Consensus 21 ~~L~~L~l~~~~~~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (508)
|-++-+|+++|.+. +.+|.....++.++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..++.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 33444455555444 344444444455555555444444 33444555555555555555444 3333444444455554
Q ss_pred CccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCc
Q 045861 100 LENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELS 179 (508)
Q Consensus 100 L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 179 (508)
+..|.+.. ..+|..+..+..|+.|+|+.|++. ..|..+...+++-.|++++|.|.+++.
T Consensus 85 ~R~N~LKn-----------------sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn--- 143 (1255)
T KOG0444|consen 85 VRDNNLKN-----------------SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPN--- 143 (1255)
T ss_pred hhcccccc-----------------CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCc---
Confidence 44444431 134555555566666666666555 555555555566666666666555554
Q ss_pred ccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccc-cccCcccc
Q 045861 180 FLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLT-GSIPISLG 258 (508)
Q Consensus 180 ~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~-~~~~~~l~ 258 (508)
..|.+++.|-.|++++|.+. .+|..+..+. .|+.|.+++|.+...--..+..+..|++|.+++.+-+ ..+|.++.
T Consensus 144 --~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~-~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld 219 (1255)
T KOG0444|consen 144 --SLFINLTDLLFLDLSNNRLE-MLPPQIRRLS-MLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLD 219 (1255)
T ss_pred --hHHHhhHhHhhhccccchhh-hcCHHHHHHh-hhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchh
Confidence 22445555555555555544 2333333332 4444444444332111111223334444444443322 23444455
Q ss_pred CCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEE
Q 045861 259 KLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVF 338 (508)
Q Consensus 259 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 338 (508)
.+.+|..++++.|.+. .+|+.+..+++|+.|+|++|+| +... .......+|++|
T Consensus 220 ~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~i------------------------teL~-~~~~~W~~lEtL 273 (1255)
T KOG0444|consen 220 DLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKI------------------------TELN-MTEGEWENLETL 273 (1255)
T ss_pred hhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCce------------------------eeee-ccHHHHhhhhhh
Confidence 5555555555555554 4444555555555555555554 4221 122223445555
Q ss_pred EccCCccccccCccccCCCCCcEEECCCCcCC-CccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcc
Q 045861 339 NFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLS-DSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSF 417 (508)
Q Consensus 339 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 417 (508)
+++.|+++ ..|.++..++.|+.|.+.+|+++ +-+|+.++.+..|+.+..++|.+. .+|+++..++.|+.|.|+.|.+
T Consensus 274 NlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrL 351 (1255)
T KOG0444|consen 274 NLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRL 351 (1255)
T ss_pred ccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccce
Confidence 55555555 55555555555555555555544 234555556666666666666654 5566666666666666666665
Q ss_pred cccCcccccCCCCCCEEeCCCCcce
Q 045861 418 SGFIPRSFEKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 418 ~~~~~~~l~~l~~L~~L~l~~n~l~ 442 (508)
. .+|+++.-++.|+.||++.|+-.
T Consensus 352 i-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 352 I-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred e-echhhhhhcCCcceeeccCCcCc
Confidence 5 45556666666666666666543
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=2.6e-33 Score=264.94 Aligned_cols=368 Identities=27% Similarity=0.408 Sum_probs=289.1
Q ss_pred CCCCCcEEEcccCCCC-CCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCC
Q 045861 43 QCQELIAISLSHNQLT-GLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERN 121 (508)
Q Consensus 43 ~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~ 121 (508)
.++-.|-.|+++|.++ +..|....++.+++-|.|..+++. .+|+.++.+.+|++|.+++|++.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~--------------- 68 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI--------------- 68 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH---------------
Confidence 4566778889999888 567888888999999999888887 88888999988888888888776
Q ss_pred cccccCCccccCCCCCcEEEccCccccc-ccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccC
Q 045861 122 NFSGTIPSFIFNASKLSILGIRTNSFSG-TIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQL 200 (508)
Q Consensus 122 ~~~~~~~~~~~~l~~L~~L~l~~~~i~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 200 (508)
.+...+..++.|+.+.++.|++.. -+|..+-.+..|..|++++|++..++.. +...+++-+|++++|.+
T Consensus 69 ----~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~------LE~AKn~iVLNLS~N~I 138 (1255)
T KOG0444|consen 69 ----SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTN------LEYAKNSIVLNLSYNNI 138 (1255)
T ss_pred ----hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchh------hhhhcCcEEEEcccCcc
Confidence 566777888999999999988743 4666777889999999999998877643 55667788888888888
Q ss_pred ccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchh
Q 045861 201 HGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDS 280 (508)
Q Consensus 201 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~ 280 (508)
..+....+. ++..|-.|++++|++. .+|.-...+..|+.|.+++|.+.-.-...
T Consensus 139 etIPn~lfi-------------------------nLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQ 192 (1255)
T KOG0444|consen 139 ETIPNSLFI-------------------------NLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQ 192 (1255)
T ss_pred ccCCchHHH-------------------------hhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhc
Confidence 744333333 3334444455555444 33444445555555555555543222223
Q ss_pred hhCCCCCcEEEeeCceee-eeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCC
Q 045861 281 LCNLGRLVELQFYDNKLF-GSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVV 359 (508)
Q Consensus 281 ~~~l~~L~~L~L~~n~~~-~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 359 (508)
+..+++|+.|.+++.+-+ ..+|.++..+.+|..++++.|.+. ..|..+..+++|+.|+|++|+++ ........+.+|
T Consensus 193 LPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~l 270 (1255)
T KOG0444|consen 193 LPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENL 270 (1255)
T ss_pred CccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhh
Confidence 344556677777776443 457888888999999999999888 66778889999999999999999 666677888999
Q ss_pred cEEECCCCcCCCccchhhhcCCCCCEEECcCCcccc-cCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCC
Q 045861 360 VGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQG-SIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSF 438 (508)
Q Consensus 360 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~ 438 (508)
++|+++.|+++ ..|+++..++.|+.|++.+|+++- -+|.+++.+..|+++..++|.+. ..|+.+..|..|+.|.++.
T Consensus 271 EtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~ 348 (1255)
T KOG0444|consen 271 ETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDH 348 (1255)
T ss_pred hhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccc
Confidence 99999999999 899999999999999999999873 46889999999999999999998 8999999999999999999
Q ss_pred CcceecCCCc-cccCCCCcccccCCCCCCC
Q 045861 439 NRLKGEIPSG-ESFANFSDNSFMGNSFLCG 467 (508)
Q Consensus 439 n~l~~~~p~~-~~~~~l~~l~l~~n~~~c~ 467 (508)
|++. ++|.+ ..++.+..++++.||.+--
T Consensus 349 NrLi-TLPeaIHlL~~l~vLDlreNpnLVM 377 (1255)
T KOG0444|consen 349 NRLI-TLPEAIHLLPDLKVLDLRENPNLVM 377 (1255)
T ss_pred ccee-echhhhhhcCCcceeeccCCcCccC
Confidence 9998 67776 5788999999999976543
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-32 Score=269.98 Aligned_cols=436 Identities=27% Similarity=0.341 Sum_probs=338.3
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCc
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNN 80 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (508)
+|.+..++. .||..++.+-- ++.|+++.|.+....-+...+.-+|+.|++++|.+. ..|..+..+.+|+.|+++.|.
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~-~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEA-LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhccHHH-HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 577888888 89999965544 999999999877433344556677999999999987 678889999999999999999
Q ss_pred cccCCchhccCCCCCCEeeCccccCCCCC-----CCCCCEEEccCCcccccCCccccCCCCCcEEE--------------
Q 045861 81 LIGEIPHEIGNLHNLEYLVLENNNFDGPR-----HSNLERLYLERNNFSGTIPSFIFNASKLSILG-------------- 141 (508)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~~~~~~-----~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~-------------- 141 (508)
+. ..|.+..++.+|+++.|.+|.+...+ +.+|+.|+++.|.+. ..|..+..+..+..+.
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~l~~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ 157 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNRLQSLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTS 157 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccchhhcCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcccc
Confidence 88 78889999999999999999988775 889999999999987 5555555444444444
Q ss_pred -----ccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccC
Q 045861 142 -----IRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLE 216 (508)
Q Consensus 142 -----l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~ 216 (508)
+..+.+.+.++..+..+.+ .+++.+|.+.. ..+..+.+|+.+..+.|.+.... ..-++++
T Consensus 158 ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~--------~dls~~~~l~~l~c~rn~ls~l~-----~~g~~l~ 222 (1081)
T KOG0618|consen 158 IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV--------LDLSNLANLEVLHCERNQLSELE-----ISGPSLT 222 (1081)
T ss_pred chhhhhhhhhcccchhcchhhhhe--eeecccchhhh--------hhhhhccchhhhhhhhcccceEE-----ecCcchh
Confidence 4444444444444444433 46666666542 23556666777777666655321 1123778
Q ss_pred eeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCce
Q 045861 217 YIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNK 296 (508)
Q Consensus 217 ~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 296 (508)
.|+..+|.+....+ .....+|++++++.+.+. .+|.+++.+.+|+.+...+|.++ .++.......+|+.+.+..|.
T Consensus 223 ~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~ne 298 (1081)
T KOG0618|consen 223 ALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNE 298 (1081)
T ss_pred eeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhh
Confidence 88888887763222 223457899999999988 45688999999999999999986 677777788889999888888
Q ss_pred eeeeCCcccCCCCCCCEEEcCCCcccccCCccccCcc-CCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccch
Q 045861 297 LFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLR-DILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPT 375 (508)
Q Consensus 297 ~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 375 (508)
+. -+|......++|++|++..|++....+..+.... ++..++.+.|++.......=..++.|+.|.+.+|.+++....
T Consensus 299 l~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p 377 (1081)
T KOG0618|consen 299 LE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFP 377 (1081)
T ss_pred hh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchh
Confidence 74 5667777889999999999998877665554444 378888888888743322334567889999999999998888
Q ss_pred hhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCccccCCCC
Q 045861 376 VIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSGESFANFS 455 (508)
Q Consensus 376 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~ 455 (508)
.+.+.++|+.|+|++|++.......+.++..|+.|+||||+++ .+|+++..++.|++|...+|++. ++|.....+.|+
T Consensus 378 ~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fPe~~~l~qL~ 455 (1081)
T KOG0618|consen 378 VLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFPELAQLPQLK 455 (1081)
T ss_pred hhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-echhhhhcCcce
Confidence 8999999999999999998444567788999999999999999 67799999999999999999998 899777888999
Q ss_pred cccccCCC
Q 045861 456 DNSFMGNS 463 (508)
Q Consensus 456 ~l~l~~n~ 463 (508)
.++++.|.
T Consensus 456 ~lDlS~N~ 463 (1081)
T KOG0618|consen 456 VLDLSCNN 463 (1081)
T ss_pred EEecccch
Confidence 99998883
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=2.9e-27 Score=212.69 Aligned_cols=295 Identities=23% Similarity=0.269 Sum_probs=201.4
Q ss_pred eecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccC-Cc
Q 045861 2 DFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGN-NN 80 (508)
Q Consensus 2 ~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~ 80 (508)
|.++.+++ ++|.++ -+..+.++|..|+|+.+.+.+|..+++||.|||++|.|+.+.|++|.++++|-.|-+.+ |+
T Consensus 52 dCr~~GL~-eVP~~L---P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANL---PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EccCCCcc-cCcccC---CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 56677777 778555 45677788888888877778888888888888888888888888888888877777766 77
Q ss_pred cccCCchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCC
Q 045861 81 LIGEIPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRN 160 (508)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~ 160 (508)
|+...-+.|+++..++.|.+.-|++. ....+.+..++++..|.+.+|.+...-...|..+..
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~------------------Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~ 189 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHIN------------------CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAA 189 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhc------------------chhHHHHHHhhhcchhcccchhhhhhccccccchhc
Confidence 77555567888888888888777665 244566667777777777777776444446666777
Q ss_pred CCEEeCCCCcCcCCCCCCcc--------cccccCCCCCCEEEccCccCccCCChhhhhcccccCee--Ec-cCCcCcccC
Q 045861 161 LQWLDLSFNYLTSSTSELSF--------LSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYI--YM-PYCRRSGRI 229 (508)
Q Consensus 161 L~~L~l~~n~~~~~~~~~~~--------~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L--~l-~~~~~~~~~ 229 (508)
++.+.+..|.+.+.... ++ ...++.........+.+..+..+.+..+.. .++.+ .+ +.+......
T Consensus 190 i~tlhlA~np~icdCnL-~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c---~~esl~s~~~~~d~~d~~c 265 (498)
T KOG4237|consen 190 IKTLHLAQNPFICDCNL-PWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLC---SLESLPSRLSSEDFPDSIC 265 (498)
T ss_pred cchHhhhcCcccccccc-chhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhh---hHHhHHHhhccccCcCCcC
Confidence 77777766664432110 00 011222222222233333333222222221 11111 11 111111222
Q ss_pred C-hhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCC
Q 045861 230 P-EEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKL 308 (508)
Q Consensus 230 ~-~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~ 308 (508)
| .-|..+++|+++++++|+++.+.+.+|.+...+++|++..|++.......|.++..|+.|+|++|+|+...|..|...
T Consensus 266 P~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~ 345 (498)
T KOG4237|consen 266 PAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTL 345 (498)
T ss_pred hHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccc
Confidence 2 347788999999999999998888899999999999999999887767788889999999999999988888888888
Q ss_pred CCCCEEEcCCCccc
Q 045861 309 SPLRNLLLHSNVLT 322 (508)
Q Consensus 309 ~~L~~L~l~~n~~~ 322 (508)
.+|.+|.+-.|++.
T Consensus 346 ~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 346 FSLSTLNLLSNPFN 359 (498)
T ss_pred ceeeeeehccCccc
Confidence 89999988887653
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1.2e-23 Score=230.75 Aligned_cols=287 Identities=23% Similarity=0.260 Sum_probs=137.7
Q ss_pred CCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcC-cCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcc
Q 045861 134 ASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYL-TSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLS 212 (508)
Q Consensus 134 l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~-~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 212 (508)
..+|++|++.++++. .++..+..+++|+.++++++.. ..+ ..+..+++|+.|++++|.....+|..+..+.
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~i-------p~ls~l~~Le~L~L~~c~~L~~lp~si~~L~ 681 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEI-------PDLSMATNLETLKLSDCSSLVELPSSIQYLN 681 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcC-------CccccCCcccEEEecCCCCccccchhhhccC
Confidence 344445555444443 2333344444555555544321 111 1133344455555554443334444444443
Q ss_pred cccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEe
Q 045861 213 TSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQF 292 (508)
Q Consensus 213 ~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 292 (508)
+|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|++|.+
T Consensus 682 -~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l 754 (1153)
T PLN03210 682 -KLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELIL 754 (1153)
T ss_pred -CCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccc
Confidence 55555555544444444332 4455555555555433233321 234555555555544 233222 3445555555
Q ss_pred eCceeee-------eCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECC
Q 045861 293 YDNKLFG-------SIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLS 365 (508)
Q Consensus 293 ~~n~~~~-------~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 365 (508)
.++.... ..+..+...++|+.|++++|......|..+..+++|+.|++++|..-+.+|..+ .+++|+.|+++
T Consensus 755 ~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls 833 (1153)
T PLN03210 755 CEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLS 833 (1153)
T ss_pred cccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECC
Confidence 4432110 001111223456666666665555555555666666666666654333444443 45566666666
Q ss_pred CCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCc
Q 045861 366 RNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNR 440 (508)
Q Consensus 366 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 440 (508)
+|.....+|.. .++|+.|++++|.++ .+|..+..+++|+.|++++|+-...+|..+..+++|+.+++++|.
T Consensus 834 ~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 834 GCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 65443333322 245666666666665 455556666666666666654333445555556666666666665
No 13
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=4e-23 Score=226.68 Aligned_cols=341 Identities=20% Similarity=0.219 Sum_probs=197.5
Q ss_pred CchhhhhCCCCCcEEecCCCc------CCCCCCcCCcCC-CCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccC
Q 045861 12 LPDDMCQHLPRLQALDINNNH------VTGPVPRNLWQC-QELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGE 84 (508)
Q Consensus 12 l~~~~~~~~~~L~~L~l~~~~------~~~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 84 (508)
+....|+.+++|+.|.+..+. +...+|..|..+ .+|+.|++.++.+. .+|..| ...+|++|+++++++. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 344455666777766665442 122344444444 34666666666655 445444 4566666666666655 4
Q ss_pred CchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEE
Q 045861 85 IPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWL 164 (508)
Q Consensus 85 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L 164 (508)
++..+..+++|++|+++++.. ...+| .+..+++|+.|++++|.....+|..+..+++|+.|
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~~------------------l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSKN------------------LKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred cccccccCCCCCEEECCCCCC------------------cCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 555556666666666665431 11333 25556667777777665555666666667777777
Q ss_pred eCCCCc-CcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEE
Q 045861 165 DLSFNY-LTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMS 243 (508)
Q Consensus 165 ~l~~n~-~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~ 243 (508)
++++|. +..++.. .++++|+.|++++|.....+|. ...+|++|++.++.+. .+|..+ .+++|++|.
T Consensus 687 ~L~~c~~L~~Lp~~-------i~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~ 753 (1153)
T PLN03210 687 DMSRCENLEILPTG-------INLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIE-EFPSNL-RLENLDELI 753 (1153)
T ss_pred eCCCCCCcCccCCc-------CCCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCccc-cccccc-ccccccccc
Confidence 776653 2222221 1456677777766654433332 2236667777666654 344332 456666666
Q ss_pred cccCcccc-------ccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEc
Q 045861 244 LGINKLTG-------SIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLL 316 (508)
Q Consensus 244 l~~~~~~~-------~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l 316 (508)
+.++.... ..+......++|+.|++++|.....+|..+..+++|+.|++++|...+.+|... .+++|+.|++
T Consensus 754 l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~L 832 (1153)
T PLN03210 754 LCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDL 832 (1153)
T ss_pred ccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEEC
Confidence 65533210 111112234567777777776655677777777777777777765444555544 5677777777
Q ss_pred CCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCc
Q 045861 317 HSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNK 392 (508)
Q Consensus 317 ~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 392 (508)
++|......+. ...+|++|++++|.++ .+|..+..+++|+.|++++|.-...++.....+++|+.+++++|.
T Consensus 833 s~c~~L~~~p~---~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 833 SGCSRLRTFPD---ISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCccccccc---cccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 77654433222 2356777777777776 566667777777777777754333455556667777777777774
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=7e-26 Score=203.81 Aligned_cols=282 Identities=24% Similarity=0.250 Sum_probs=190.0
Q ss_pred EEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeCcc-c
Q 045861 25 ALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVLEN-N 103 (508)
Q Consensus 25 ~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n 103 (508)
.++.++..++ .+|..+ -+.-..++|..|+|+.+.+.+|+.+++||+|||++|+|..+.|++|.+++.+..|-+.+ |
T Consensus 50 ~VdCr~~GL~-eVP~~L--P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANL--PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred eEEccCCCcc-cCcccC--CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 5667777777 666654 45677899999999999999999999999999999999999999999999999888877 7
Q ss_pred cCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCccccc
Q 045861 104 NFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSS 183 (508)
Q Consensus 104 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~ 183 (508)
+|++ .-.+.|.++..++.|.+..|++.....++|..++++..|.+..|.+..+.. ..
T Consensus 127 kI~~------------------l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~-----~t 183 (498)
T KOG4237|consen 127 KITD------------------LPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICK-----GT 183 (498)
T ss_pred chhh------------------hhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhcc-----cc
Confidence 6762 334678899999999999999998888999999999999999999887665 35
Q ss_pred ccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccc-----------
Q 045861 184 LRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGS----------- 252 (508)
Q Consensus 184 l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~----------- 252 (508)
|..+..++.+.+..|.+...- +|+++.=. ....|..++.........+.+.++..+
T Consensus 184 f~~l~~i~tlhlA~np~icdC---------nL~wla~~----~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~es 250 (498)
T KOG4237|consen 184 FQGLAAIKTLHLAQNPFICDC---------NLPWLADD----LAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLES 250 (498)
T ss_pred ccchhccchHhhhcCcccccc---------ccchhhhH----HhhchhhcccceecchHHHHHHHhcccchhhhhhhHHh
Confidence 778888999988888743210 11111000 000111111111111111111111111
Q ss_pred ---------------cCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcC
Q 045861 253 ---------------IPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLH 317 (508)
Q Consensus 253 ---------------~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~ 317 (508)
....|.++++|+.|++++|.++..-+.+|.++..+++|.|..|++...-...|..+..|+.|+++
T Consensus 251 l~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~ 330 (498)
T KOG4237|consen 251 LPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLY 330 (498)
T ss_pred HHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeec
Confidence 11235556666666666666665555666666666666666666544444455566666666666
Q ss_pred CCcccccCCccccCccCCcEEEccCCcc
Q 045861 318 SNVLTYVIPSTFLSLRDILVFNFSSNSL 345 (508)
Q Consensus 318 ~n~~~~~~~~~~~~~~~L~~L~L~~n~l 345 (508)
+|+|+...+..|..+.+|.+|+|-.|.+
T Consensus 331 ~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 331 DNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred CCeeEEEecccccccceeeeeehccCcc
Confidence 6666666666666666666666665554
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=9.2e-20 Score=186.28 Aligned_cols=254 Identities=27% Similarity=0.336 Sum_probs=121.5
Q ss_pred eecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCcc
Q 045861 2 DFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNL 81 (508)
Q Consensus 2 ~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 81 (508)
+++.++++ ++|..+. ++|+.|++.+|.++ .+|. ..++|++|++++|+++.+ |.. .++|++|++++|.+
T Consensus 207 dLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~N~L 274 (788)
T PRK15387 207 NVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIFSNPL 274 (788)
T ss_pred EcCCCCCC-cCCcchh---cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCcc-cCc---ccccceeeccCCch
Confidence 45556665 5555441 35566666666655 2332 235566666666655532 321 24555666666555
Q ss_pred ccCCchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCC
Q 045861 82 IGEIPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNL 161 (508)
Q Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L 161 (508)
. .+|.. ..+|+.|++++|.++.+ |.. .++|+.|++++|++.. +|.. ...|
T Consensus 275 ~-~Lp~l---p~~L~~L~Ls~N~Lt~L-------------------P~~---p~~L~~LdLS~N~L~~-Lp~l---p~~L 324 (788)
T PRK15387 275 T-HLPAL---PSGLCKLWIFGNQLTSL-------------------PVL---PPGLQELSVSDNQLAS-LPAL---PSEL 324 (788)
T ss_pred h-hhhhc---hhhcCEEECcCCccccc-------------------ccc---ccccceeECCCCcccc-CCCC---cccc
Confidence 4 33322 13455555555555433 221 2345555555555442 2221 1234
Q ss_pred CEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcE
Q 045861 162 QWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLIT 241 (508)
Q Consensus 162 ~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~ 241 (508)
+.|++++|.+..++.. ..+|+.|++++|.++. +|. .+.+++.|++++|.+.. +|.. ..+|+.
T Consensus 325 ~~L~Ls~N~L~~LP~l---------p~~Lq~LdLS~N~Ls~-LP~----lp~~L~~L~Ls~N~L~~-LP~l---~~~L~~ 386 (788)
T PRK15387 325 CKLWAYNNQLTSLPTL---------PSGLQELSVSDNQLAS-LPT----LPSELYKLWAYNNRLTS-LPAL---PSGLKE 386 (788)
T ss_pred cccccccCcccccccc---------ccccceEecCCCccCC-CCC----CCcccceehhhcccccc-Cccc---ccccce
Confidence 4445555544433210 0235555555555542 121 12245555555554442 3321 234555
Q ss_pred EEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcc
Q 045861 242 MSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVL 321 (508)
Q Consensus 242 L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~ 321 (508)
|++++|.+.+ +|.. .++|+.|++++|.+.. +|.. ..+|+.|++++|+++ .+|..+..+++|+.|++++|++
T Consensus 387 LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~L 457 (788)
T PRK15387 387 LIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 457 (788)
T ss_pred EEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCC
Confidence 6666655552 2321 2455566666666552 3332 124555666666654 4555555666666666666666
Q ss_pred ccc
Q 045861 322 TYV 324 (508)
Q Consensus 322 ~~~ 324 (508)
.+.
T Consensus 458 s~~ 460 (788)
T PRK15387 458 SER 460 (788)
T ss_pred Cch
Confidence 544
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=2.2e-19 Score=183.53 Aligned_cols=161 Identities=26% Similarity=0.286 Sum_probs=79.0
Q ss_pred CCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEc
Q 045861 261 QKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNF 340 (508)
Q Consensus 261 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L 340 (508)
++|+.|++++|.+.+ +|.. ..+|+.|++++|.+.+ +|.. .++|+.|++++|++..... ...+|+.|++
T Consensus 302 ~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~LP~----lp~~L~~L~L 369 (788)
T PRK15387 302 PGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLASLPT----LPSELYKLWA 369 (788)
T ss_pred cccceeECCCCcccc-CCCC---cccccccccccCcccc-cccc---ccccceEecCCCccCCCCC----CCcccceehh
Confidence 345555555554442 2221 1234445555554432 2211 1345555555555553321 1234555555
Q ss_pred cCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCccccc
Q 045861 341 SSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGF 420 (508)
Q Consensus 341 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~ 420 (508)
++|++. .+|.. ..+|+.|++++|++.+ +|.. .++|+.|++++|.++ .+|.. ..+|+.|++++|+++ .
T Consensus 370 s~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~ 436 (788)
T PRK15387 370 YNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-R 436 (788)
T ss_pred hccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-c
Confidence 555555 23322 2345666666666652 3322 245666666666665 34432 234556666666666 4
Q ss_pred CcccccCCCCCCEEeCCCCcceecCC
Q 045861 421 IPRSFEKLLYLEYLNLSFNRLKGEIP 446 (508)
Q Consensus 421 ~~~~l~~l~~L~~L~l~~n~l~~~~p 446 (508)
+|..+..+++|+.|++++|++++..|
T Consensus 437 LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 437 LPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred cChHHhhccCCCeEECCCCCCCchHH
Confidence 55556666666666666666654433
No 17
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=2.2e-19 Score=171.86 Aligned_cols=209 Identities=24% Similarity=0.230 Sum_probs=120.1
Q ss_pred cccCCCCCCcEEccCCcCccccchhhhCCCC---CcEEEeeCceeee----eCCcccCCC-CCCCEEEcCCCccccc---
Q 045861 256 SLGKLQKLQGLYLYKNKLEGSIPDSLCNLGR---LVELQFYDNKLFG----SIPACIGKL-SPLRNLLLHSNVLTYV--- 324 (508)
Q Consensus 256 ~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~---L~~L~L~~n~~~~----~~~~~~~~~-~~L~~L~l~~n~~~~~--- 324 (508)
.+..+++|++|++++|.+.+..+..+..+.+ |++|++++|.+.. .+...+..+ ++|+.|++++|.++..
T Consensus 76 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 155 (319)
T cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE 155 (319)
T ss_pred HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH
Confidence 4445556666666666655444444433333 6666666666542 112233444 6677777777766522
Q ss_pred -CCccccCccCCcEEEccCCccccc----cCccccCCCCCcEEECCCCcCCCccc----hhhhcCCCCCEEECcCCcccc
Q 045861 325 -IPSTFLSLRDILVFNFSSNSLNGS----LPLDIGNLKVVVGIDLSRNNLSDSIP----TVIGGLSNLAFFSLAYNKLQG 395 (508)
Q Consensus 325 -~~~~~~~~~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~L~~n~l~~ 395 (508)
....+..+.+|++|++++|.+++. ++..+...++|+.|++++|.+.+... ..+..+++|++|++++|.+++
T Consensus 156 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 156 ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 222344556677777777776632 22334455677777887777764332 334566778888888887764
Q ss_pred cCccccc-----CCCCCCEEECCCCcccc----cCcccccCCCCCCEEeCCCCcceec----CCCc-ccc-CCCCccccc
Q 045861 396 SIPESLG-----DLRSLEFLDLSNNSFSG----FIPRSFEKLLYLEYLNLSFNRLKGE----IPSG-ESF-ANFSDNSFM 460 (508)
Q Consensus 396 ~~~~~~~-----~l~~L~~L~L~~n~~~~----~~~~~l~~l~~L~~L~l~~n~l~~~----~p~~-~~~-~~l~~l~l~ 460 (508)
.....+. ..+.|+.|++++|.++. .+.+.+..+++|+++++++|.+... +... ... ..++.+++.
T Consensus 236 ~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (319)
T cd00116 236 AGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVK 315 (319)
T ss_pred HHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccC
Confidence 2222221 13678888888887762 2234455567788888888887622 1111 223 456677777
Q ss_pred CCCC
Q 045861 461 GNSF 464 (508)
Q Consensus 461 ~n~~ 464 (508)
+|||
T Consensus 316 ~~~~ 319 (319)
T cd00116 316 DDSF 319 (319)
T ss_pred CCCC
Confidence 7765
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.74 E-value=1.1e-17 Score=172.37 Aligned_cols=225 Identities=24% Similarity=0.421 Sum_probs=117.4
Q ss_pred CCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEc
Q 045861 189 NLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYL 268 (508)
Q Consensus 189 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l 268 (508)
.++.|++++|.++. +|..+. .+|++|++++|.+. .+|..+. ..|+.|++++|.+. .+|..+. .+|+.|++
T Consensus 200 ~L~~L~Ls~N~Lts-LP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 200 QITTLILDNNELKS-LPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred CCcEEEecCCCCCc-CChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 34445555554442 222221 14555555554443 2332221 24555555555554 3333332 34556666
Q ss_pred cCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccc
Q 045861 269 YKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGS 348 (508)
Q Consensus 269 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 348 (508)
++|.+. .+|..+. ++|+.|++++|.+.. +|..+. ++|+.|++++|.+....... .++|++|++++|.+++
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~LP~~l---~~sL~~L~Ls~N~Lt~- 339 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTALPETL---PPGLKTLEAGENALTS- 339 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccCCccc---cccceeccccCCcccc-
Confidence 666555 3333332 356666666665542 232221 35666666666665432211 2466666777776663
Q ss_pred cCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccc---
Q 045861 349 LPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSF--- 425 (508)
Q Consensus 349 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l--- 425 (508)
+|..+ .++|+.|++++|++. .+|..+ .++|+.|++++|.++ .+|..+. ..|+.|++++|++. .+|+.+
T Consensus 340 LP~~l--~~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~ 410 (754)
T PRK15370 340 LPASL--PPELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHF 410 (754)
T ss_pred CChhh--cCcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHH
Confidence 44333 256777777777766 345433 256777777777776 4454443 35777777777776 334333
Q ss_pred -cCCCCCCEEeCCCCcce
Q 045861 426 -EKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 426 -~~l~~L~~L~l~~n~l~ 442 (508)
..++.+..+++.+|+++
T Consensus 411 ~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 411 RGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hhcCCCccEEEeeCCCcc
Confidence 23466677777777765
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=4.4e-19 Score=169.85 Aligned_cols=280 Identities=22% Similarity=0.239 Sum_probs=153.3
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCC----CCcCCcCCCCCcEEEcccCCCCC------CCCcccCCCCC
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGP----VPRNLWQCQELIAISLSHNQLTG------LIPRDIGNLTS 70 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~L~~n~l~~------~~~~~~~~l~~ 70 (508)
|+|+++.+++.--...|..+.+|++|+++++.++.. ++..+...+.+++++++++.+.. ..+..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 578888888555556668888999999999988532 34445667889999999887762 22345667889
Q ss_pred CCeEEccCCccccCCchhccCCCC---CCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCC-CCCcEEEccCcc
Q 045861 71 ARALLLGNNNLIGEIPHEIGNLHN---LEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNA-SKLSILGIRTNS 146 (508)
Q Consensus 71 L~~L~L~~n~l~~~~~~~~~~l~~---L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l-~~L~~L~l~~~~ 146 (508)
|++|++++|.+....+..+..+.+ |++|++++|.+..... ..+...+..+ ++|++|++++|.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~--------------~~l~~~l~~~~~~L~~L~L~~n~ 148 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGL--------------RLLAKGLKDLPPALEKLVLGRNR 148 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHH--------------HHHHHHHHhCCCCceEEEcCCCc
Confidence 999999988887555555555544 8888888887653100 0111122223 444444444444
Q ss_pred ccc----ccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhh----hhcccccCee
Q 045861 147 FSG----TIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSM----GNLSTSLEYI 218 (508)
Q Consensus 147 i~~----~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~----~~~~~~L~~L 218 (508)
+++ .++..+..+++|++|++++|.+.... .......+..+++|+.|++++|.+.+.....+ ... ++|++|
T Consensus 149 l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~-~~L~~L 226 (319)
T cd00116 149 LEGASCEALAKALRANRDLKELNLANNGIGDAG-IRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL-KSLEVL 226 (319)
T ss_pred CCchHHHHHHHHHHhCCCcCEEECcCCCCchHH-HHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc-CCCCEE
Confidence 431 11222333444555555444443200 00011122333445555555544432211111 111 245555
Q ss_pred EccCCcCcccCChhhh-----cCCCCcEEEcccCcccc----ccCccccCCCCCCcEEccCCcCccc----cchhhhCC-
Q 045861 219 YMPYCRRSGRIPEEIG-----NLINLITMSLGINKLTG----SIPISLGKLQKLQGLYLYKNKLEGS----IPDSLCNL- 284 (508)
Q Consensus 219 ~l~~~~~~~~~~~~l~-----~l~~L~~L~l~~~~~~~----~~~~~l~~~~~L~~L~l~~n~l~~~----~~~~~~~l- 284 (508)
++++|.+.+.....+. ..+.|++|++++|.++. .+...+..+++|+++++++|.+.+. ....+...
T Consensus 227 ~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~ 306 (319)
T cd00116 227 NLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPG 306 (319)
T ss_pred ecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcC
Confidence 5555544431111111 13567777777776651 2233445557778888888877643 33344444
Q ss_pred CCCcEEEeeCce
Q 045861 285 GRLVELQFYDNK 296 (508)
Q Consensus 285 ~~L~~L~L~~n~ 296 (508)
+.|+++++.++.
T Consensus 307 ~~~~~~~~~~~~ 318 (319)
T cd00116 307 NELESLWVKDDS 318 (319)
T ss_pred CchhhcccCCCC
Confidence 567777776653
No 20
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.73 E-value=2e-17 Score=170.43 Aligned_cols=116 Identities=22% Similarity=0.340 Sum_probs=64.2
Q ss_pred CCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeC
Q 045861 21 PRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVL 100 (508)
Q Consensus 21 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 100 (508)
.+.+.|+++++.++ .+|..+ .++|+.|++++|+++. +|..+. .+|++|++++|++. .+|..+. .+|+.|++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~I--p~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACI--PEQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCccc--ccCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 35567777777776 455544 3567778888777773 444433 47788888877776 4554433 35667777
Q ss_pred ccccCCCC---CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccc
Q 045861 101 ENNNFDGP---RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFS 148 (508)
Q Consensus 101 ~~n~~~~~---~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~ 148 (508)
++|.+..+ ...+|+.|++++|+++ .+|..+. ++|+.|++++|+++
T Consensus 249 s~N~L~~LP~~l~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 249 SINRITELPERLPSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred cCCccCcCChhHhCCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc
Confidence 76666532 1123444444444443 2333222 24444444444444
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.64 E-value=3.5e-18 Score=137.00 Aligned_cols=153 Identities=31% Similarity=0.484 Sum_probs=114.2
Q ss_pred CCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEe
Q 045861 19 HLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYL 98 (508)
Q Consensus 19 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 98 (508)
++.+.+.|.+++|+++ ..|..+..+.+|+.|++++|+++ .+|..+..++.|++|+++-|++. +.|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 5778889999999998 66777999999999999999998 56788999999999999999988 899999999999999
Q ss_pred eCccccCCCC-------CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcC
Q 045861 99 VLENNNFDGP-------RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYL 171 (508)
Q Consensus 99 ~L~~n~~~~~-------~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~ 171 (508)
|+.+|.+..- .+..|+.|++++|.+. .+|..++++++|+.|.+++|.+- .+|..++.+..|++|++.+|++
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl 185 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRL 185 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhccccee
Confidence 9999987643 2334555555555554 55555666666666666665554 4555555555666666666655
Q ss_pred cCCCC
Q 045861 172 TSSTS 176 (508)
Q Consensus 172 ~~~~~ 176 (508)
+.++.
T Consensus 186 ~vlpp 190 (264)
T KOG0617|consen 186 TVLPP 190 (264)
T ss_pred eecCh
Confidence 55443
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.64 E-value=2.7e-18 Score=137.59 Aligned_cols=177 Identities=27% Similarity=0.429 Sum_probs=118.4
Q ss_pred CCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEE
Q 045861 284 LGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGID 363 (508)
Q Consensus 284 l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 363 (508)
+..++.|.++.|+++ .+|..+..+.+|+.|++.+|+++ ..|..+..+++|+.|+++-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 344555555555554 44445555666666666666665 33445566666666666666666 6777777777777777
Q ss_pred CCCCcCCC-ccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcce
Q 045861 364 LSRNNLSD-SIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 364 l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~ 442 (508)
+..|.+.+ ..|..|..+..|+-|++++|.+. .+|..++.+++|+.|.+.+|.+. ..|..++.+..|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 77777663 35666777777888888888876 67777788888888888888877 56677777888888888888887
Q ss_pred ecCCCcc-cc---CCCCcccccCCCCCC
Q 045861 443 GEIPSGE-SF---ANFSDNSFMGNSFLC 466 (508)
Q Consensus 443 ~~~p~~~-~~---~~l~~l~l~~n~~~c 466 (508)
.+|.+. .+ .+-....+..|||.-
T Consensus 187 -vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 187 -VLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred -ecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 444432 21 222345678888875
No 23
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.26 E-value=5.2e-13 Score=119.77 Aligned_cols=190 Identities=19% Similarity=0.172 Sum_probs=94.2
Q ss_pred hhhcCCCCcEEEcccCccccccCcc----ccCCCCCCcEEccCCcCccccchhh-------------hCCCCCcEEEeeC
Q 045861 232 EIGNLINLITMSLGINKLTGSIPIS----LGKLQKLQGLYLYKNKLEGSIPDSL-------------CNLGRLVELQFYD 294 (508)
Q Consensus 232 ~l~~l~~L~~L~l~~~~~~~~~~~~----l~~~~~L~~L~l~~n~l~~~~~~~~-------------~~l~~L~~L~L~~ 294 (508)
.+..++.|+++++++|.+....+.. +.++..|++|++.+|.+...-...+ ..-++|+++...+
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r 166 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGR 166 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec
Confidence 4566778999999999886443333 3557888888888888764322222 1224455555555
Q ss_pred ceeeee----CCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCC
Q 045861 295 NKLFGS----IPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLS 370 (508)
Q Consensus 295 n~~~~~----~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 370 (508)
|.+... +...|...+.|+.+.+++|.|...-.. .....+..+++|+.||+.+|-++
T Consensus 167 Nrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~--------------------al~eal~~~~~LevLdl~DNtft 226 (382)
T KOG1909|consen 167 NRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVT--------------------ALAEALEHCPHLEVLDLRDNTFT 226 (382)
T ss_pred cccccccHHHHHHHHHhccccceEEEecccccCchhH--------------------HHHHHHHhCCcceeeecccchhh
Confidence 544211 112233344455555554444321110 11223344455555555555444
Q ss_pred Cc----cchhhhcCCCCCEEECcCCcccccCcccc-----cCCCCCCEEECCCCcccc----cCcccccCCCCCCEEeCC
Q 045861 371 DS----IPTVIGGLSNLAFFSLAYNKLQGSIPESL-----GDLRSLEFLDLSNNSFSG----FIPRSFEKLLYLEYLNLS 437 (508)
Q Consensus 371 ~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~~~~----~~~~~l~~l~~L~~L~l~ 437 (508)
.. ....+..+++|+.|++++|.+......+| ...++|++|.+.+|.++. .+..++...+.|+.|+|+
T Consensus 227 ~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLn 306 (382)
T KOG1909|consen 227 LEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLN 306 (382)
T ss_pred hHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCC
Confidence 22 12233445555555555555543322222 224555566666655543 122233345556666666
Q ss_pred CCcc
Q 045861 438 FNRL 441 (508)
Q Consensus 438 ~n~l 441 (508)
+|++
T Consensus 307 gN~l 310 (382)
T KOG1909|consen 307 GNRL 310 (382)
T ss_pred cccc
Confidence 6655
No 24
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.26 E-value=3.4e-13 Score=120.91 Aligned_cols=247 Identities=17% Similarity=0.206 Sum_probs=150.2
Q ss_pred ccCCCCCcEEEccCccccc----ccChhhcCCCCCCEEeCCCCcCcC----CCCC-CcccccccCCCCCCEEEccCccCc
Q 045861 131 IFNASKLSILGIRTNSFSG----TIPSTIANLRNLQWLDLSFNYLTS----STSE-LSFLSSLRNCRNLKVIDLTGNQLH 201 (508)
Q Consensus 131 ~~~l~~L~~L~l~~~~i~~----~~~~~~~~l~~L~~L~l~~n~~~~----~~~~-~~~~~~l~~~~~L~~L~l~~~~~~ 201 (508)
+..+..++.|++++|.+.. .+...+.+.++|++.+++.--... ++.. ..+..++..+++|++++++.|.+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 4455677888888887743 233445566677777765421111 1111 112244556666777777777665
Q ss_pred cCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCcccccc-------------CccccCCCCCCcEEc
Q 045861 202 GILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSI-------------PISLGKLQKLQGLYL 268 (508)
Q Consensus 202 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~-------------~~~l~~~~~L~~L~l 268 (508)
-..+..+.. .+.++..|++|.+.+|.+.-.- ....+.-+.|+.+.+
T Consensus 106 ~~g~~~l~~---------------------ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~ 164 (382)
T KOG1909|consen 106 PKGIRGLEE---------------------LLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFIC 164 (382)
T ss_pred ccchHHHHH---------------------HHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEe
Confidence 444443333 3567889999999999875221 122345678999999
Q ss_pred cCCcCccc----cchhhhCCCCCcEEEeeCceeeeeC----CcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEc
Q 045861 269 YKNKLEGS----IPDSLCNLGRLVELQFYDNKLFGSI----PACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNF 340 (508)
Q Consensus 269 ~~n~l~~~----~~~~~~~l~~L~~L~L~~n~~~~~~----~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L 340 (508)
.+|.+... +...|...+.|+.+.+..|.|.... ...+..+++|+.|+++.|-++.....
T Consensus 165 ~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~------------- 231 (382)
T KOG1909|consen 165 GRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV------------- 231 (382)
T ss_pred eccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH-------------
Confidence 99998642 3346777899999999999874221 22344555555555555554422110
Q ss_pred cCCccccccCccccCCCCCcEEECCCCcCCCccchhh-----hcCCCCCEEECcCCccccc----CcccccCCCCCCEEE
Q 045861 341 SSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVI-----GGLSNLAFFSLAYNKLQGS----IPESLGDLRSLEFLD 411 (508)
Q Consensus 341 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~ 411 (508)
.+...+..++.|++|++++|.+......+| .+.|+|+.|.+.+|.|+.. +..+....+.|+.|+
T Consensus 232 -------~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLn 304 (382)
T KOG1909|consen 232 -------ALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLN 304 (382)
T ss_pred -------HHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhc
Confidence 233455666677777777777665544433 2467788888888877632 223344567788888
Q ss_pred CCCCccc
Q 045861 412 LSNNSFS 418 (508)
Q Consensus 412 L~~n~~~ 418 (508)
|++|.+.
T Consensus 305 LngN~l~ 311 (382)
T KOG1909|consen 305 LNGNRLG 311 (382)
T ss_pred CCccccc
Confidence 8888873
No 25
>PLN03150 hypothetical protein; Provisional
Probab=99.25 E-value=1.6e-11 Score=126.39 Aligned_cols=118 Identities=39% Similarity=0.589 Sum_probs=106.5
Q ss_pred CCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCC
Q 045861 358 VVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLS 437 (508)
Q Consensus 358 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~ 437 (508)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|+.+..+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceecCCCccc--cCCCCcccccCCCCCCCCCCCCCCCCC
Q 045861 438 FNRLKGEIPSGES--FANFSDNSFMGNSFLCGSPNLQVPPRK 477 (508)
Q Consensus 438 ~n~l~~~~p~~~~--~~~l~~l~l~~n~~~c~~~~~~~~~~~ 477 (508)
+|++++.+|.... ...+..+++.+|+.+|++|.+ +.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l--~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGL--RACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCC--CCCc
Confidence 9999999998632 345567899999999998864 5675
No 26
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.21 E-value=1.9e-11 Score=103.03 Aligned_cols=125 Identities=28% Similarity=0.373 Sum_probs=40.2
Q ss_pred CCCCCcEEecCCCcCCCCCCcCCc-CCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhc-cCCCCCC
Q 045861 19 HLPRLQALDINNNHVTGPVPRNLW-QCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEI-GNLHNLE 96 (508)
Q Consensus 19 ~~~~L~~L~l~~~~~~~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~ 96 (508)
+..+++.|++++|.|+. +. .+. .+.+|+.|++++|.++.+ +.+..++.|++|++++|++.. +...+ ..+++|+
T Consensus 17 n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~ 91 (175)
T PF14580_consen 17 NPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQ 91 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--
T ss_pred ccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCC
Confidence 45567777777777763 32 343 466777777777777754 456677777777777777763 33333 3567777
Q ss_pred EeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccCh----hhcCCCCCCEEeC
Q 045861 97 YLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPS----TIANLRNLQWLDL 166 (508)
Q Consensus 97 ~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~----~~~~l~~L~~L~l 166 (508)
+|.+++|++... .....+..+++|++|++.+|+++.. +. .+..+|+|+.||-
T Consensus 92 ~L~L~~N~I~~l-----------------~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 92 ELYLSNNKISDL-----------------NELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EEE-TTS---SC-----------------CCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred EEECcCCcCCCh-----------------HHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 777777766521 1124455667777777777776532 21 2445666666663
No 27
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.20 E-value=1.4e-11 Score=129.68 Aligned_cols=155 Identities=24% Similarity=0.344 Sum_probs=118.9
Q ss_pred CCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCC--CCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCC
Q 045861 19 HLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQ--LTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLE 96 (508)
Q Consensus 19 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~--l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 96 (508)
+....|.+.+.++.+. .++.. ..+++|++|-+.+|. +....++.|..++.|+.|||++|.-.+.+|+.++++.+|+
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchh-hccCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 4578889999998887 33433 356689999999986 5555555688899999999998876668999999999999
Q ss_pred EeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCC
Q 045861 97 YLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTS 176 (508)
Q Consensus 97 ~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 176 (508)
+|+++++.+. .+|..+.++.+|.+|++..+.....++.....+++|++|.+...... .
T Consensus 599 yL~L~~t~I~-------------------~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~---~ 656 (889)
T KOG4658|consen 599 YLDLSDTGIS-------------------HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALS---N 656 (889)
T ss_pred cccccCCCcc-------------------ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccc---c
Confidence 9999999887 78999999999999999988766566777777999999998776522 1
Q ss_pred CCcccccccCCCCCCEEEccC
Q 045861 177 ELSFLSSLRNCRNLKVIDLTG 197 (508)
Q Consensus 177 ~~~~~~~l~~~~~L~~L~l~~ 197 (508)
+...+..+..+.+|+.+....
T Consensus 657 ~~~~l~el~~Le~L~~ls~~~ 677 (889)
T KOG4658|consen 657 DKLLLKELENLEHLENLSITI 677 (889)
T ss_pred chhhHHhhhcccchhhheeec
Confidence 222334455666666666543
No 28
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.18 E-value=5.8e-13 Score=126.64 Aligned_cols=167 Identities=29% Similarity=0.502 Sum_probs=99.4
Q ss_pred eecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCcc
Q 045861 2 DFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNL 81 (508)
Q Consensus 2 ~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 81 (508)
|++.|+++ ++|..+ ..|-.|..+.++.|.+. .+|.++..+..|.+++|+.|+++ .+|..+..++ |+.|-+++|++
T Consensus 81 DlsrNR~~-elp~~~-~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 81 DLSRNRFS-ELPEEA-CAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hccccccc-cCchHH-HHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 56677766 777666 55667777777777766 56666777777777777777666 5555555553 66777777766
Q ss_pred ccCCchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCC
Q 045861 82 IGEIPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNL 161 (508)
Q Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L 161 (508)
+ .+|+.++....|..||.+.|.+. .+|..++++.+|+.|.++.|++. .+|..+..+ .|
T Consensus 156 ~-~lp~~ig~~~tl~~ld~s~nei~-------------------slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pL 213 (722)
T KOG0532|consen 156 T-SLPEEIGLLPTLAHLDVSKNEIQ-------------------SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PL 213 (722)
T ss_pred c-cCCcccccchhHHHhhhhhhhhh-------------------hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ce
Confidence 6 66666666666777777776665 44444555555555555555544 333334433 24
Q ss_pred CEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCc
Q 045861 162 QWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLH 201 (508)
Q Consensus 162 ~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~ 201 (508)
..||++.|++..++. .|..|..|++|.|.+|.+.
T Consensus 214 i~lDfScNkis~iPv------~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 214 IRLDFSCNKISYLPV------DFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred eeeecccCceeecch------hhhhhhhheeeeeccCCCC
Confidence 555555555544332 2444555555555555554
No 29
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=7.9e-12 Score=109.83 Aligned_cols=133 Identities=26% Similarity=0.238 Sum_probs=97.8
Q ss_pred CCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEEC
Q 045861 309 SPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSL 388 (508)
Q Consensus 309 ~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 388 (508)
..|+++++++|.|+.+ +....-.+.++.|+++.|.+.. +. .++.+++|+.||+++|.++ ....+-..+-+.++|.|
T Consensus 284 q~LtelDLS~N~I~~i-DESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLITQI-DESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchhhh-hhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 4678888888887733 4455667788888888888873 22 2677888888888888887 45555566778888888
Q ss_pred cCCcccccCcccccCCCCCCEEECCCCcccccCc-ccccCCCCCCEEeCCCCcceecCCCc
Q 045861 389 AYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIP-RSFEKLLYLEYLNLSFNRLKGEIPSG 448 (508)
Q Consensus 389 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~l~~n~l~~~~p~~ 448 (508)
++|.+... .++..+-+|..||+++|+|..... ..++++|-|+.+.+.+|++. .+|+.
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~-~~vdY 417 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA-GSVDY 417 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc-ccchH
Confidence 88888633 556777788888999988875322 46788888899999999887 45553
No 30
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=5.6e-12 Score=116.40 Aligned_cols=209 Identities=23% Similarity=0.268 Sum_probs=125.7
Q ss_pred cCCCCcEEEcccCccccccC-ccccCCCCCCcEEccCCcCcc--ccchhhhCCCCCcEEEeeCceeeeeCCcc-cCCCCC
Q 045861 235 NLINLITMSLGINKLTGSIP-ISLGKLQKLQGLYLYKNKLEG--SIPDSLCNLGRLVELQFYDNKLFGSIPAC-IGKLSP 310 (508)
Q Consensus 235 ~l~~L~~L~l~~~~~~~~~~-~~l~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~~~~~~~~~-~~~~~~ 310 (508)
++.+|+.+.+.++.+....- .....+++++.|++++|-+.. .+.....++|+|+.|+++.|.+....... -..++.
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 44556666666655441110 244556677777777766542 23344556777777777777653221111 124567
Q ss_pred CCEEEcCCCcccccC-CccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccc--hhhhcCCCCCEEE
Q 045861 311 LRNLLLHSNVLTYVI-PSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIP--TVIGGLSNLAFFS 387 (508)
Q Consensus 311 L~~L~l~~n~~~~~~-~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~ 387 (508)
|+.|.+++|.++... ......+|+|+.|++.+|...........-+..|++|||++|++.+ .+ ...+.++.|..|+
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhhh
Confidence 777777777776332 1234556777777777774322333334456677888888887763 33 2356678888888
Q ss_pred CcCCccccc-Cccc-----ccCCCCCCEEECCCCcccccC-cccccCCCCCCEEeCCCCcceec
Q 045861 388 LAYNKLQGS-IPES-----LGDLRSLEFLDLSNNSFSGFI-PRSFEKLLYLEYLNLSFNRLKGE 444 (508)
Q Consensus 388 L~~n~l~~~-~~~~-----~~~l~~L~~L~L~~n~~~~~~-~~~l~~l~~L~~L~l~~n~l~~~ 444 (508)
++.|.+... .|++ ...+++|+.|++..|++.+.. -..+..+++|+.|.+..|.+...
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 888877632 2222 345678888888888886421 13455667788888888888643
No 31
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.13 E-value=3.5e-11 Score=101.40 Aligned_cols=102 Identities=25% Similarity=0.405 Sum_probs=43.6
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCccc-CCCCCCCeEEccCC
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDI-GNLTSARALLLGNN 79 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n 79 (508)
|+|+||+|+ .+.. +-..+.+|+.|++++|.|+. +. .+..++.|++|++++|+++.+. +.+ ..+++|++|++++|
T Consensus 24 L~L~~n~I~-~Ie~-L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i~-~~l~~~lp~L~~L~L~~N 98 (175)
T PF14580_consen 24 LNLRGNQIS-TIEN-LGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSIS-EGLDKNLPNLQELYLSNN 98 (175)
T ss_dssp -------------S---TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-C-HHHHHH-TT--EEE-TTS
T ss_pred ccccccccc-cccc-hhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCccc-cchHHhCCcCCEEECcCC
Confidence 689999999 6653 31368899999999999984 33 5888999999999999999653 334 46899999999999
Q ss_pred ccccC-CchhccCCCCCCEeeCccccCCC
Q 045861 80 NLIGE-IPHEIGNLHNLEYLVLENNNFDG 107 (508)
Q Consensus 80 ~l~~~-~~~~~~~l~~L~~L~L~~n~~~~ 107 (508)
++... .-..+..+++|++|++.+|+++.
T Consensus 99 ~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 99 KISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp ---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred cCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 99752 23567889999999999998873
No 32
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.11 E-value=2.1e-11 Score=107.26 Aligned_cols=201 Identities=16% Similarity=0.135 Sum_probs=132.7
Q ss_pred CccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCc-ccccCCccccCc
Q 045861 254 PISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNV-LTYVIPSTFLSL 332 (508)
Q Consensus 254 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~-~~~~~~~~~~~~ 332 (508)
|..+.-+.+|..+.++.+.-. -+......-|.|+++.+.+..+. ....+-.++.+.....+.-. .++..-......
T Consensus 207 ~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~--~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTW 283 (490)
T KOG1259|consen 207 SFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQ--DVPSLLPETILADPSGSEPSTSNGSALVSADTW 283 (490)
T ss_pred ccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccc--ccccccchhhhcCccCCCCCccCCceEEecchH
Confidence 333444556666666666543 12222333456777766655442 11111112222222221111 111111223345
Q ss_pred cCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEEC
Q 045861 333 RDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDL 412 (508)
Q Consensus 333 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 412 (508)
+.|+++||++|.++ .+...+.-.+.++.|++++|.+... . .++.+++|+.|+|++|.++ .+.++=..+-+++.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v-~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV-Q-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee-h-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 67999999999998 6777788899999999999999843 2 3888999999999999998 44444456789999999
Q ss_pred CCCcccccCcccccCCCCCCEEeCCCCcceecCCC---ccccCCCCcccccCCCC
Q 045861 413 SNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPS---GESFANFSDNSFMGNSF 464 (508)
Q Consensus 413 ~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~---~~~~~~l~~l~l~~n~~ 464 (508)
++|.+.+. ..+..+-+|..||+++|++. .+.. .+.++-|+.+.+.+||.
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCCc
Confidence 99999865 46788899999999999987 3333 34566678899999984
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.10 E-value=1.1e-10 Score=115.15 Aligned_cols=181 Identities=38% Similarity=0.531 Sum_probs=90.9
Q ss_pred hcCCCCcEEEcccCccccccCccccCCC-CCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCC
Q 045861 234 GNLINLITMSLGINKLTGSIPISLGKLQ-KLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLR 312 (508)
Q Consensus 234 ~~l~~L~~L~l~~~~~~~~~~~~l~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~ 312 (508)
.....++.+++.++.++ .++....... +|+.|++++|.+. .++.....+++|+.|++++|++. .++......+.|+
T Consensus 113 ~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~ 189 (394)
T COG4886 113 LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN 189 (394)
T ss_pred hcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhh
Confidence 34455666666666666 3343444442 6666666666665 33344555666666666666654 3333333455566
Q ss_pred EEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCc
Q 045861 313 NLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNK 392 (508)
Q Consensus 313 ~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 392 (508)
.|++++|.+..+.. .......|+++.+++|.+. ..+..+..+..+..+.+.+|++. ..+..++.++++++|++++|.
T Consensus 190 ~L~ls~N~i~~l~~-~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~ 266 (394)
T COG4886 190 NLDLSGNKISDLPP-EIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQ 266 (394)
T ss_pred heeccCCccccCch-hhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccc
Confidence 66666665553322 1123333555555555332 23334444555555555555554 223444455555555555555
Q ss_pred ccccCcccccCCCCCCEEECCCCcccccCc
Q 045861 393 LQGSIPESLGDLRSLEFLDLSNNSFSGFIP 422 (508)
Q Consensus 393 l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~ 422 (508)
++.. +. +..+.+++.|++++|.+....+
T Consensus 267 i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 267 ISSI-SS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred cccc-cc-ccccCccCEEeccCccccccch
Confidence 5522 22 4445555555555555554333
No 34
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.08 E-value=2.9e-10 Score=111.99 Aligned_cols=173 Identities=32% Similarity=0.432 Sum_probs=82.6
Q ss_pred CCCCcEEEcccCCCCCCCCcccCCCC-CCCeEEccCCccccCCchhccCCCCCCEeeCccccCCCC-----CCCCCCEEE
Q 045861 44 CQELIAISLSHNQLTGLIPRDIGNLT-SARALLLGNNNLIGEIPHEIGNLHNLEYLVLENNNFDGP-----RHSNLERLY 117 (508)
Q Consensus 44 ~~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-----~~~~L~~L~ 117 (508)
++.+..|++.++.++.+ +....... +|+.|++++|++. .+|..++.+++|+.|+++.|++..+ ..+.|+.|+
T Consensus 115 ~~~l~~L~l~~n~i~~i-~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 115 LTNLTSLDLDNNNITDI-PPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLD 192 (394)
T ss_pred ccceeEEecCCcccccC-ccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhhhhhhhhhhhee
Confidence 34455555555555422 22333332 5555555555544 3334445555555555555554433 234455555
Q ss_pred ccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccC
Q 045861 118 LERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTG 197 (508)
Q Consensus 118 l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~ 197 (508)
+++|++. .+|........|+++.+++|.+. ..+..+..+.++..+.+.+|++.... ..+..++.++.|++++
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~------~~~~~l~~l~~L~~s~ 264 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDLP------ESIGNLSNLETLDLSN 264 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeecc------chhccccccceecccc
Confidence 5555554 44444334444556666555432 33344455555555555555543321 2344445556666666
Q ss_pred ccCccCCChhhhhcccccCeeEccCCcCcccC
Q 045861 198 NQLHGILPSSMGNLSTSLEYIYMPYCRRSGRI 229 (508)
Q Consensus 198 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 229 (508)
|.++.... +.... .+++++++++.+....
T Consensus 265 n~i~~i~~--~~~~~-~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 265 NQISSISS--LGSLT-NLRELDLSGNSLSNAL 293 (394)
T ss_pred cccccccc--ccccC-ccCEEeccCccccccc
Confidence 55553322 33332 5566666655554433
No 35
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=2.3e-11 Score=112.37 Aligned_cols=209 Identities=19% Similarity=0.127 Sum_probs=90.4
Q ss_pred CCCCCCEEEccCCcccccCC-ccccCCCCCcEEEccCcccccc--cChhhcCCCCCCEEeCCCCcCcCCCCCCccccccc
Q 045861 109 RHSNLERLYLERNNFSGTIP-SFIFNASKLSILGIRTNSFSGT--IPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLR 185 (508)
Q Consensus 109 ~~~~L~~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~i~~~--~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~ 185 (508)
.+.+|+.+.+.++.+..... .....+++++.|+|+.|-+... +......+++|+.|+++.|++....+.. .-.
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~----~~~ 194 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSN----TTL 194 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcccc----chh
Confidence 34455555665555542211 2444555566666665544321 1222334555666666555554422211 011
Q ss_pred CCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCc
Q 045861 186 NCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQG 265 (508)
Q Consensus 186 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~ 265 (508)
.++.|+.|.++.|.++..... ..+..+|+|+.|.++.|...........-++.|+.
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~------------------------~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~ 250 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQ------------------------WILLTFPSLEVLYLEANEIILIKATSTKILQTLQE 250 (505)
T ss_pred hhhhhheEEeccCCCCHHHHH------------------------HHHHhCCcHHHhhhhcccccceecchhhhhhHHhh
Confidence 334444455554444422111 12234455555555555322122222333445555
Q ss_pred EEccCCcCccccc--hhhhCCCCCcEEEeeCceeeeeC-Ccc-----cCCCCCCCEEEcCCCcccccCC-ccccCccCCc
Q 045861 266 LYLYKNKLEGSIP--DSLCNLGRLVELQFYDNKLFGSI-PAC-----IGKLSPLRNLLLHSNVLTYVIP-STFLSLRDIL 336 (508)
Q Consensus 266 L~l~~n~l~~~~~--~~~~~l~~L~~L~L~~n~~~~~~-~~~-----~~~~~~L~~L~l~~n~~~~~~~-~~~~~~~~L~ 336 (508)
|+|++|.+.+ .+ .....+|.|+.|+++.|.+.... +.. ...+++|+.|+++.|++..... ..+..+++|+
T Consensus 251 LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk 329 (505)
T KOG3207|consen 251 LDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLK 329 (505)
T ss_pred ccccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhh
Confidence 5555555442 12 23344555555555555543221 111 1234555555555555532211 1223334444
Q ss_pred EEEccCCccc
Q 045861 337 VFNFSSNSLN 346 (508)
Q Consensus 337 ~L~L~~n~l~ 346 (508)
.|.+..|.+.
T Consensus 330 ~l~~~~n~ln 339 (505)
T KOG3207|consen 330 HLRITLNYLN 339 (505)
T ss_pred hhhccccccc
Confidence 4454455443
No 36
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.05 E-value=5.7e-12 Score=120.02 Aligned_cols=195 Identities=27% Similarity=0.488 Sum_probs=128.1
Q ss_pred CCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEE
Q 045861 236 LINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLL 315 (508)
Q Consensus 236 l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~ 315 (508)
+..-+..+++.|++. ++|..+..+..|+.+.++.|.+. .++...+.+..|++++++.|++. .+|..+..+ -|+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l-pLkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL-PLKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcC-cceeEE
Confidence 444556677777776 56666777777777777777776 66777777777777777777764 445444443 377777
Q ss_pred cCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccc
Q 045861 316 LHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQG 395 (508)
Q Consensus 316 l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 395 (508)
+++|+++.. |..++....|..|+.+.|.+. .+|..+..+.+|+.|.+..|++. .+|..+.. -.|..||++.|+++
T Consensus 150 ~sNNkl~~l-p~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLTSL-PEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccccC-CcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-
Confidence 777777644 334446677777777777776 55666667777777777777776 44544553 34677777777776
Q ss_pred cCcccccCCCCCCEEECCCCcccccCccccc---CCCCCCEEeCCCCc
Q 045861 396 SIPESLGDLRSLEFLDLSNNSFSGFIPRSFE---KLLYLEYLNLSFNR 440 (508)
Q Consensus 396 ~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~---~l~~L~~L~l~~n~ 440 (508)
.+|-+|..|+.|++|-|.+|.+.+ .|..+. .+.-.++|+...|+
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLqS-PPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQS-PPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCCC-ChHHHHhccceeeeeeecchhcc
Confidence 667777777777777777777773 333331 22345677777664
No 37
>PLN03150 hypothetical protein; Provisional
Probab=99.04 E-value=5.4e-10 Score=115.26 Aligned_cols=114 Identities=36% Similarity=0.565 Sum_probs=103.5
Q ss_pred CCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECC
Q 045861 334 DILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLS 413 (508)
Q Consensus 334 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 413 (508)
.++.|+|++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+|++|.+++.+|+.+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCcccccCC-CCCCEEeCCCCcceecCCC
Q 045861 414 NNSFSGFIPRSFEKL-LYLEYLNLSFNRLKGEIPS 447 (508)
Q Consensus 414 ~n~~~~~~~~~l~~l-~~L~~L~l~~n~l~~~~p~ 447 (508)
+|++++.+|..+... .++..+++.+|+..+..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 999999999888764 4678899999987765554
No 38
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.03 E-value=1.3e-10 Score=122.38 Aligned_cols=303 Identities=24% Similarity=0.232 Sum_probs=172.2
Q ss_pred cCCCCCCCCchhhhhCCCCCcEEecCCCc--CCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCcc
Q 045861 4 ANNTLTGSLPDDMCQHLPRLQALDINNNH--VTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNL 81 (508)
Q Consensus 4 ~~n~l~~~l~~~~~~~~~~L~~L~l~~~~--~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 81 (508)
.+|.+. .++... .+++|++|-+..|. +.......|..++.|++|||++|.--+.+|+.++.+.+||+|+++++.+
T Consensus 531 ~~~~~~-~~~~~~--~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I 607 (889)
T KOG4658|consen 531 MNNKIE-HIAGSS--ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGI 607 (889)
T ss_pred eccchh-hccCCC--CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCc
Confidence 344444 344333 46688888888875 4434444477788999999988765557888888899999999998888
Q ss_pred ccCCchhccCCCCCCEeeCccccCCCC------CCCCCCEEEccCCcc--cccCCccccCCCCCcEEEccCcccccccCh
Q 045861 82 IGEIPHEIGNLHNLEYLVLENNNFDGP------RHSNLERLYLERNNF--SGTIPSFIFNASKLSILGIRTNSFSGTIPS 153 (508)
Q Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~~~~~------~~~~L~~L~l~~~~~--~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~ 153 (508)
. .+|..+.+++.|.+|++..+..... .+++|++|.+..... +......+.++++|+.+....... .+..
T Consensus 608 ~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e 684 (889)
T KOG4658|consen 608 S-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLE 684 (889)
T ss_pred c-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHh
Confidence 7 8888888899999998887763222 378888888866542 222233445555666665543322 1111
Q ss_pred hhcCCCCCC----EEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhc-----ccccCeeEccCCc
Q 045861 154 TIANLRNLQ----WLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNL-----STSLEYIYMPYCR 224 (508)
Q Consensus 154 ~~~~l~~L~----~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~-----~~~L~~L~l~~~~ 224 (508)
.+..+..|. .+.+.++... .....+..+.+|+.|.+.++.+........... .+++..+.+..+.
T Consensus 685 ~l~~~~~L~~~~~~l~~~~~~~~------~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~ 758 (889)
T KOG4658|consen 685 DLLGMTRLRSLLQSLSIEGCSKR------TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCH 758 (889)
T ss_pred hhhhhHHHHHHhHhhhhcccccc------eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccc
Confidence 122333333 2222222111 122456677788888888877653322111100 1133333444443
Q ss_pred CcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccc-cchhhhCCCCCcEEEeeCceeee---e
Q 045861 225 RSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGS-IPDSLCNLGRLVELQFYDNKLFG---S 300 (508)
Q Consensus 225 ~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~~~~---~ 300 (508)
.. ..+.+....++|+.+.+..+...+........+..+..+.+..+.+.+. .-....+++++..+.+..-.+.. .
T Consensus 759 ~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~l~~~~ve 837 (889)
T KOG4658|consen 759 ML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLKLEELIVE 837 (889)
T ss_pred cc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCccchhheehh
Confidence 32 2233445678888888888877655554555555555555555544433 22333444444444443322110 0
Q ss_pred CCcccCCCCCCCEEEcCCC
Q 045861 301 IPACIGKLSPLRNLLLHSN 319 (508)
Q Consensus 301 ~~~~~~~~~~L~~L~l~~n 319 (508)
-.+..+.+|.+..+.+.+|
T Consensus 838 ~~p~l~~~P~~~~~~i~~~ 856 (889)
T KOG4658|consen 838 ECPKLGKLPLLSTLTIVGC 856 (889)
T ss_pred cCcccccCccccccceecc
Confidence 1223466777777877775
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.95 E-value=4.9e-10 Score=77.58 Aligned_cols=61 Identities=44% Similarity=0.634 Sum_probs=46.1
Q ss_pred CCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcc
Q 045861 381 SNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRL 441 (508)
Q Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l 441 (508)
|+|++|++++|+++...+..|.++++|++|++++|.++...+++|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677777777777765556777777888888888887777777777788888888877764
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.91 E-value=9.5e-10 Score=76.15 Aligned_cols=60 Identities=38% Similarity=0.555 Sum_probs=31.8
Q ss_pred CCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCc
Q 045861 21 PRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNN 80 (508)
Q Consensus 21 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (508)
|+|++|++++|.++...+..|.++++|++|++++|+++.+.+++|.++++|++|++++|+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 345555555555554444455555555555555555554444555555555555555554
No 41
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.74 E-value=9.7e-10 Score=108.45 Aligned_cols=237 Identities=25% Similarity=0.235 Sum_probs=150.8
Q ss_pred ccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEee
Q 045861 214 SLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFY 293 (508)
Q Consensus 214 ~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 293 (508)
.++.+.+..+.+.. +-..+..+.+|+.+++.+|.+... ...+..+++|++|++++|.+++. ..+..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhheec
Confidence 55666666665543 222356677888888888888743 22266778888888888888744 335666678888888
Q ss_pred CceeeeeCCcccCCCCCCCEEEcCCCcccccCC-ccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCc
Q 045861 294 DNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIP-STFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDS 372 (508)
Q Consensus 294 ~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 372 (508)
+|.+.. ...+..++.|+.+++++|.+..... . ...+.+++.+.+.+|.+.... .+..+..+..+++..|.+...
T Consensus 149 ~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i~~~ 223 (414)
T KOG0531|consen 149 GNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--GLDLLKKLVLLSLLDNKISKL 223 (414)
T ss_pred cCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--chHHHHHHHHhhcccccceec
Confidence 888742 2334457888888888888876644 2 466777888888888776322 233444455557777777632
Q ss_pred cchhhhcCCC--CCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceec---CCC
Q 045861 373 IPTVIGGLSN--LAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGE---IPS 447 (508)
Q Consensus 373 ~~~~~~~l~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~---~p~ 447 (508)
.+ +..+.. |+.+++++|++. ..+..+..+..+..+++.+|++... +.+...+.+..+....|.+... ...
T Consensus 224 ~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (414)
T KOG0531|consen 224 EG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQE 298 (414)
T ss_pred cC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcc
Confidence 21 222233 788888888887 4445667778888888888888754 3355556677777777776522 111
Q ss_pred --ccccCCCCcccccCCCC
Q 045861 448 --GESFANFSDNSFMGNSF 464 (508)
Q Consensus 448 --~~~~~~l~~l~l~~n~~ 464 (508)
......+..+.+.+||.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 299 YITSAAPTLVTLTLELNPI 317 (414)
T ss_pred ccccccccccccccccCcc
Confidence 12334455566666653
No 42
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.70 E-value=1.8e-09 Score=106.52 Aligned_cols=248 Identities=23% Similarity=0.240 Sum_probs=179.3
Q ss_pred cCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCC
Q 045861 185 RNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQ 264 (508)
Q Consensus 185 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~ 264 (508)
..+..++.+.+..+.+.. ....+..+. +++.+++.++.+..... .+..+++|++|++++|.++... .+..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~-~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLK-SLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLE--GLSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhccccccc-ceeeeeccccchhhccc-chhhhhcchheecccccccccc--chhhccchh
Confidence 345666677777776664 122233343 89999999998875432 2678999999999999998543 466777899
Q ss_pred cEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCC-cccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCC
Q 045861 265 GLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIP-ACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSN 343 (508)
Q Consensus 265 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n 343 (508)
.|++.+|.+... ..+..++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+.... .+..+..+..+++..|
T Consensus 144 ~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 144 ELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--GLDLLKKLVLLSLLDN 218 (414)
T ss_pred hheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--chHHHHHHHHhhcccc
Confidence 999999999743 345568899999999999864443 2 577899999999999987553 2334445555688888
Q ss_pred ccccccCccccCCC--CCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCccccc-
Q 045861 344 SLNGSLPLDIGNLK--VVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGF- 420 (508)
Q Consensus 344 ~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~- 420 (508)
.+...-+. .... .|+.+++++|++.. .+..+..+..+..|++.+|++... ..+...+.+..+....+.+...
T Consensus 219 ~i~~~~~l--~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 293 (414)
T KOG0531|consen 219 KISKLEGL--NELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSE 293 (414)
T ss_pred cceeccCc--ccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchh
Confidence 88743322 2222 38899999999983 435677789999999999998744 4466778888999999987732
Q ss_pred --Cccc-ccCCCCCCEEeCCCCcceecCCC
Q 045861 421 --IPRS-FEKLLYLEYLNLSFNRLKGEIPS 447 (508)
Q Consensus 421 --~~~~-l~~l~~L~~L~l~~n~l~~~~p~ 447 (508)
.... ....+.+..+++.+|+.....+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 294 AISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred hhhccccccccccccccccccCcccccccc
Confidence 1121 45567899999999998765553
No 43
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.58 E-value=2.1e-09 Score=105.65 Aligned_cols=180 Identities=25% Similarity=0.353 Sum_probs=118.0
Q ss_pred chhhhCCCCCcEEEeeCceeeeeCCcccCCC-CCCCEEEcCCCccc---ccC---CccccC---ccCCcEEEccCCcccc
Q 045861 278 PDSLCNLGRLVELQFYDNKLFGSIPACIGKL-SPLRNLLLHSNVLT---YVI---PSTFLS---LRDILVFNFSSNSLNG 347 (508)
Q Consensus 278 ~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~-~~L~~L~l~~n~~~---~~~---~~~~~~---~~~L~~L~L~~n~l~~ 347 (508)
|-.+..+.+|+.|.+.+|.+... ..+..+ ..|+.|.-.+ ... .+. .+.+.+ .-.|.+.+.+.|.++
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 44556677888888888876421 111111 2233332221 111 000 011111 124677788888887
Q ss_pred ccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcc-cccCCCCCCEEECCCCcccccCccccc
Q 045861 348 SLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPE-SLGDLRSLEFLDLSNNSFSGFIPRSFE 426 (508)
Q Consensus 348 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~n~~~~~~~~~l~ 426 (508)
.....++-++.++.|+|++|+++.. +.+..++.|+.|+|++|.++ .+|. .-.++ .|..|+++||-+++. ..+.
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHHhh--hhHH
Confidence 6677788888999999999999843 26788999999999999988 3432 22233 499999999998865 4678
Q ss_pred CCCCCCEEeCCCCcceec--CCCccccCCCCcccccCCCCCCC
Q 045861 427 KLLYLEYLNLSFNRLKGE--IPSGESFANFSDNSFMGNSFLCG 467 (508)
Q Consensus 427 ~l~~L~~L~l~~n~l~~~--~p~~~~~~~l~~l~l~~n~~~c~ 467 (508)
++++|+.||+++|-+++. +.....+..|+.+.+.|||..|.
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 889999999999987632 22224556677889999998886
No 44
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=8.4e-10 Score=97.22 Aligned_cols=178 Identities=20% Similarity=0.232 Sum_probs=99.0
Q ss_pred CCCEEEccCCccccc-CCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCc-CcCCCCCCcccccccCCCC
Q 045861 112 NLERLYLERNNFSGT-IPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNY-LTSSTSELSFLSSLRNCRN 189 (508)
Q Consensus 112 ~L~~L~l~~~~~~~~-~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~l~~~~~ 189 (508)
.|++||++...++.. +...+..+.+|+.|.+.++++.+.+...+++..+|+.++++++. ++... .--.+.+|+.
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~----~~ll~~scs~ 261 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENA----LQLLLSSCSR 261 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhH----HHHHHHhhhh
Confidence 466677766665522 33445567777777888777777777777777778888777653 22211 1123567777
Q ss_pred CCEEEccCccCccC-CChhhhhcccccCeeEccCCcCc---ccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCc
Q 045861 190 LKVIDLTGNQLHGI-LPSSMGNLSTSLEYIYMPYCRRS---GRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQG 265 (508)
Q Consensus 190 L~~L~l~~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~---~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~ 265 (508)
|..|++++|..... ....+.+..++++.|+++++... ..+... ...+++|.+
T Consensus 262 L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL------------------------~~rcp~l~~ 317 (419)
T KOG2120|consen 262 LDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTL------------------------VRRCPNLVH 317 (419)
T ss_pred HhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHH------------------------HHhCCceee
Confidence 77777777755432 33344444556666666665321 011111 234555555
Q ss_pred EEccCCc-CccccchhhhCCCCCcEEEeeCceeeeeCCc---ccCCCCCCCEEEcCCC
Q 045861 266 LYLYKNK-LEGSIPDSLCNLGRLVELQFYDNKLFGSIPA---CIGKLSPLRNLLLHSN 319 (508)
Q Consensus 266 L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~---~~~~~~~L~~L~l~~n 319 (508)
|++++|. +.......|..++.|++|.++.|.. ..|. .+...|+|.+|++.++
T Consensus 318 LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 318 LDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred eccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 5555542 3333344455566666666666642 2222 2445566666666665
No 45
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.43 E-value=1.5e-09 Score=106.74 Aligned_cols=126 Identities=27% Similarity=0.276 Sum_probs=88.8
Q ss_pred CCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchh-hhcCCCCCEEEC
Q 045861 310 PLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTV-IGGLSNLAFFSL 388 (508)
Q Consensus 310 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L 388 (508)
.|...+.+.|.+. ..+..+.-++.++.|+|+.|+++... .+..++.|+.|||+.|.+. .+|.. ..++. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4556666667666 34456667778888888888887433 6778888888888888887 44432 34455 888888
Q ss_pred cCCcccccCcccccCCCCCCEEECCCCcccccCc-ccccCCCCCCEEeCCCCcce
Q 045861 389 AYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIP-RSFEKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 389 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L~l~~n~l~ 442 (508)
++|.++.. ..+.++.+|+.||+++|-+.+... +-+..+..|+.|+|.||++-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 88888733 446778888888888888775322 23445667888888888874
No 46
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.39 E-value=1.8e-08 Score=78.51 Aligned_cols=133 Identities=19% Similarity=0.209 Sum_probs=99.4
Q ss_pred CCcEEEccCCccccccCc---cccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEE
Q 045861 334 DILVFNFSSNSLNGSLPL---DIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFL 410 (508)
Q Consensus 334 ~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 410 (508)
.+..++|+.|++- -+++ .+.....|+..++++|.+....+..-..++..+.|++++|.++ .+|+.+..++.|+.|
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 4556677777654 2333 3445567777899999998544444456779999999999998 778779999999999
Q ss_pred ECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCccccCCC-CcccccCCCCCCCCCC
Q 045861 411 DLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSGESFANF-SDNSFMGNSFLCGSPN 470 (508)
Q Consensus 411 ~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l-~~l~l~~n~~~c~~~~ 470 (508)
+++.|.+. ..|+.+..+.++.+|+..+|... .+|.....+++ .-+++.++||--+||.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 99999999 66777777999999999999987 77766433333 3466788888877764
No 47
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.38 E-value=9.6e-08 Score=84.49 Aligned_cols=188 Identities=20% Similarity=0.157 Sum_probs=108.8
Q ss_pred CCCCCcEEccCCcCcc--ccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCC-ccccCccCCc
Q 045861 260 LQKLQGLYLYKNKLEG--SIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIP-STFLSLRDIL 336 (508)
Q Consensus 260 ~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~-~~~~~~~~L~ 336 (508)
++.++.+++.+|.+.+ .+...+.++|+|+.|+++.|.+...+...-....+|+.|.+.+..+..... .....+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 4566677777776653 333445667777777777776643333322345677777777766653322 3345567777
Q ss_pred EEEccCCccccc--cCccccCC-CCCcEEECCCCcCCC--ccchhhhcCCCCCEEECcCCcccccC-cccccCCCCCCEE
Q 045861 337 VFNFSSNSLNGS--LPLDIGNL-KVVVGIDLSRNNLSD--SIPTVIGGLSNLAFFSLAYNKLQGSI-PESLGDLRSLEFL 410 (508)
Q Consensus 337 ~L~L~~n~l~~~--~~~~~~~l-~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L 410 (508)
+++++.|.+... ........ +.++++....|.... ..-....-+|++..+.+..|++.... -+.+..++.+..|
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~L 229 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCL 229 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhh
Confidence 777777744321 11111222 245555555554331 00111234677788888888765432 2455566777788
Q ss_pred ECCCCcccccCc-ccccCCCCCCEEeCCCCcceecCCC
Q 045861 411 DLSNNSFSGFIP-RSFEKLLYLEYLNLSFNRLKGEIPS 447 (508)
Q Consensus 411 ~L~~n~~~~~~~-~~l~~l~~L~~L~l~~n~l~~~~p~ 447 (508)
+|+.|++.+... +++.+.++|..|.++++++...+..
T Consensus 230 nL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~ 267 (418)
T KOG2982|consen 230 NLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRG 267 (418)
T ss_pred hhcccccccHHHHHHHcCCchhheeeccCCcccccccC
Confidence 888888875322 5667778888888888887654444
No 48
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.38 E-value=1.3e-08 Score=89.97 Aligned_cols=180 Identities=21% Similarity=0.224 Sum_probs=117.0
Q ss_pred CCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCccc--CChhhhcCC
Q 045861 160 NLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGR--IPEEIGNLI 237 (508)
Q Consensus 160 ~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--~~~~l~~l~ 237 (508)
.|+.+|++...++.. .....+..|.+|+.|.++++.+.+.+...++.-. .|+.++++.+.-... ....+.+|.
T Consensus 186 Rlq~lDLS~s~it~s----tl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~-~L~~lnlsm~sG~t~n~~~ll~~scs 260 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVS----TLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNS-NLVRLNLSMCSGFTENALQLLLSSCS 260 (419)
T ss_pred hhHHhhcchhheeHH----HHHHHHHHHHhhhhccccccccCcHHHHHHhccc-cceeeccccccccchhHHHHHHHhhh
Confidence 466677666554431 1113355666777777777766665555555554 677777776532221 223467788
Q ss_pred CCcEEEcccCccccccC-ccccC-CCCCCcEEccCCc--Ccc-ccchhhhCCCCCcEEEeeCc-eeeeeCCcccCCCCCC
Q 045861 238 NLITMSLGINKLTGSIP-ISLGK-LQKLQGLYLYKNK--LEG-SIPDSLCNLGRLVELQFYDN-KLFGSIPACIGKLSPL 311 (508)
Q Consensus 238 ~L~~L~l~~~~~~~~~~-~~l~~-~~~L~~L~l~~n~--l~~-~~~~~~~~l~~L~~L~L~~n-~~~~~~~~~~~~~~~L 311 (508)
.|..|+++.|....... ..... -++|+.|+++++. +.. .+......+|+|..|++++| .+.......|.+++.|
T Consensus 261 ~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L 340 (419)
T KOG2120|consen 261 RLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYL 340 (419)
T ss_pred hHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchh
Confidence 89999999887753322 11111 2678899999864 221 23334567999999999998 4555555667889999
Q ss_pred CEEEcCCCcccccCCc---cccCccCCcEEEccCCccc
Q 045861 312 RNLLLHSNVLTYVIPS---TFLSLRDILVFNFSSNSLN 346 (508)
Q Consensus 312 ~~L~l~~n~~~~~~~~---~~~~~~~L~~L~L~~n~l~ 346 (508)
++|.++.|... .|. .+...++|.+|++-|+--.
T Consensus 341 ~~lSlsRCY~i--~p~~~~~l~s~psl~yLdv~g~vsd 376 (419)
T KOG2120|consen 341 QHLSLSRCYDI--IPETLLELNSKPSLVYLDVFGCVSD 376 (419)
T ss_pred eeeehhhhcCC--ChHHeeeeccCcceEEEEeccccCc
Confidence 99999988542 232 4667899999999987543
No 49
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.33 E-value=6.4e-08 Score=84.48 Aligned_cols=252 Identities=19% Similarity=0.137 Sum_probs=119.5
Q ss_pred cCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhc
Q 045861 156 ANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGN 235 (508)
Q Consensus 156 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 235 (508)
..+..+.++++++|.+..-... .....+.+-.+|+...++.- +++...+.+.. +|+ .+...+..
T Consensus 27 ~~~d~~~evdLSGNtigtEA~e-~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~~---~L~-----------~Ll~aLlk 90 (388)
T COG5238 27 EMMDELVEVDLSGNTIGTEAME-ELCNVIANVRNLRVVNFSDA-FTGRDKDELYS---NLV-----------MLLKALLK 90 (388)
T ss_pred HhhcceeEEeccCCcccHHHHH-HHHHHHhhhcceeEeehhhh-hhcccHHHHHH---HHH-----------HHHHHHhc
Confidence 3466677777777766542111 00122334455555555432 22222221111 111 12235678
Q ss_pred CCCCcEEEcccCccccccCcc----ccCCCCCCcEEccCCcCccccchhh-------------hCCCCCcEEEeeCceee
Q 045861 236 LINLITMSLGINKLTGSIPIS----LGKLQKLQGLYLYKNKLEGSIPDSL-------------CNLGRLVELQFYDNKLF 298 (508)
Q Consensus 236 l~~L~~L~l~~~~~~~~~~~~----l~~~~~L~~L~l~~n~l~~~~~~~~-------------~~l~~L~~L~L~~n~~~ 298 (508)
||.|+.++++.|.+....|.. +..-+.|.+|.+++|.+.......+ ..-|.|+.+....|++-
T Consensus 91 cp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle 170 (388)
T COG5238 91 CPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE 170 (388)
T ss_pred CCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc
Confidence 899999999999887665543 4556789999999988763322211 22355666666655542
Q ss_pred eeCC----cccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCc--
Q 045861 299 GSIP----ACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDS-- 372 (508)
Q Consensus 299 ~~~~----~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 372 (508)
.... ..+..-..|+.+.+.+|.|....-.. ..-..+..+.+|+.||+++|.++..
T Consensus 171 ngs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~-------------------L~~~gl~y~~~LevLDlqDNtft~~gS 231 (388)
T COG5238 171 NGSKELSAALLESHENLKEVKIQQNGIRPEGVTM-------------------LAFLGLFYSHSLEVLDLQDNTFTLEGS 231 (388)
T ss_pred cCcHHHHHHHHHhhcCceeEEeeecCcCcchhHH-------------------HHHHHHHHhCcceeeeccccchhhhhH
Confidence 1110 11122235555555555543210000 0001123344455555555544422
Q ss_pred --cchhhhcCCCCCEEECcCCcccccCcccc------cCCCCCCEEECCCCcccccCccc-----c--cCCCCCCEEeCC
Q 045861 373 --IPTVIGGLSNLAFFSLAYNKLQGSIPESL------GDLRSLEFLDLSNNSFSGFIPRS-----F--EKLLYLEYLNLS 437 (508)
Q Consensus 373 --~~~~~~~l~~L~~L~L~~n~l~~~~~~~~------~~l~~L~~L~L~~n~~~~~~~~~-----l--~~l~~L~~L~l~ 437 (508)
...++...+.|++|.+.+|-++......+ -..++|..|-..+|-+.+.+-.. + ..+|-|..+.+.
T Consensus 232 ~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~n 311 (388)
T COG5238 232 RYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERN 311 (388)
T ss_pred HHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHc
Confidence 12223344455555555555543222111 11355566666665543311111 1 234556666666
Q ss_pred CCcce
Q 045861 438 FNRLK 442 (508)
Q Consensus 438 ~n~l~ 442 (508)
||++.
T Consensus 312 gNr~~ 316 (388)
T COG5238 312 GNRIK 316 (388)
T ss_pred cCcch
Confidence 77665
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.29 E-value=3e-07 Score=80.36 Aligned_cols=165 Identities=18% Similarity=0.141 Sum_probs=114.2
Q ss_pred hhhhCCCCCcEEEeeCceeeeeCCc----ccCCCCCCCEEEcCCCcccccCCcc-------------ccCccCCcEEEcc
Q 045861 279 DSLCNLGRLVELQFYDNKLFGSIPA----CIGKLSPLRNLLLHSNVLTYVIPST-------------FLSLRDILVFNFS 341 (508)
Q Consensus 279 ~~~~~l~~L~~L~L~~n~~~~~~~~----~~~~~~~L~~L~l~~n~~~~~~~~~-------------~~~~~~L~~L~L~ 341 (508)
..+..||+|+.++++.|.+....+. .+++.+.|.+|.+++|.+....... ...-+.|+.+...
T Consensus 86 ~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicg 165 (388)
T COG5238 86 KALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICG 165 (388)
T ss_pred HHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEec
Confidence 3456678888888888877544443 3456678888888888765432222 2345788999999
Q ss_pred CCcccccc----CccccCCCCCcEEECCCCcCCCccc-----hhhhcCCCCCEEECcCCccccc----CcccccCCCCCC
Q 045861 342 SNSLNGSL----PLDIGNLKVVVGIDLSRNNLSDSIP-----TVIGGLSNLAFFSLAYNKLQGS----IPESLGDLRSLE 408 (508)
Q Consensus 342 ~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~ 408 (508)
.|++..-. ...+..-..|+++.+..|.|..... ..+..+.+|+.|++.+|.++.. ...++..++.|+
T Consensus 166 rNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lr 245 (388)
T COG5238 166 RNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLR 245 (388)
T ss_pred cchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhh
Confidence 88875221 1123344689999999998874422 2345789999999999998743 235566778899
Q ss_pred EEECCCCcccccCcccc------cCCCCCCEEeCCCCccee
Q 045861 409 FLDLSNNSFSGFIPRSF------EKLLYLEYLNLSFNRLKG 443 (508)
Q Consensus 409 ~L~L~~n~~~~~~~~~l------~~l~~L~~L~l~~n~l~~ 443 (508)
.|.+.+|-++.....++ ...|+|..|...+|...+
T Consensus 246 EL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~ 286 (388)
T COG5238 246 ELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRG 286 (388)
T ss_pred hccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcC
Confidence 99999999886444332 236889999999998754
No 51
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.21 E-value=8.2e-08 Score=74.95 Aligned_cols=135 Identities=19% Similarity=0.220 Sum_probs=89.5
Q ss_pred CCEEEcCCCcccccCC--ccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEEC
Q 045861 311 LRNLLLHSNVLTYVIP--STFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSL 388 (508)
Q Consensus 311 L~~L~l~~n~~~~~~~--~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 388 (508)
+..+++++|++-.+.. ........|+..+|++|.+....+.....++.++.+++++|.+. .+|..+..++.|+.|++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl 107 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNL 107 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhccc
Confidence 4455666665543322 12334456777888888888544444556678888888888888 56777888888999999
Q ss_pred cCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCc
Q 045861 389 AYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSG 448 (508)
Q Consensus 389 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~ 448 (508)
+.|.+. ..|..+..+.++-.|+..+|... .+|..+-.-...-..++.++++.+..|..
T Consensus 108 ~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 108 RFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred ccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCccc
Confidence 888887 66666666888888888888887 34433322233344455667776555543
No 52
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.20 E-value=2.8e-06 Score=71.19 Aligned_cols=101 Identities=27% Similarity=0.302 Sum_probs=53.9
Q ss_pred CCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeCccccCCCC-------CCCCCCEEE
Q 045861 45 QELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVLENNNFDGP-------RHSNLERLY 117 (508)
Q Consensus 45 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~-------~~~~L~~L~ 117 (508)
.+...+||++|.+... +.|..++.|.+|.++.|.|+.+.|.--.-+++|+.|.+.+|.+... .+|+|++|.
T Consensus 42 d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 4445555555555432 3445555555555555555544444444445555555555554433 455555555
Q ss_pred ccCCccccc---CCccccCCCCCcEEEccCccc
Q 045861 118 LERNNFSGT---IPSFIFNASKLSILGIRTNSF 147 (508)
Q Consensus 118 l~~~~~~~~---~~~~~~~l~~L~~L~l~~~~i 147 (508)
+-+|.++.. -.-.+..+++|+.||+.+-..
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~ 152 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVTR 152 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhhhhH
Confidence 555554422 112356778888888876544
No 53
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.11 E-value=4.3e-07 Score=80.49 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=17.1
Q ss_pred CCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccC
Q 045861 158 LRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQL 200 (508)
Q Consensus 158 l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~ 200 (508)
.+.++++++.+|.++.+.. ....+.+++.|+.|+++.|.+
T Consensus 70 ~~~v~elDL~~N~iSdWse---I~~ile~lP~l~~LNls~N~L 109 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSE---IGAILEQLPALTTLNLSCNSL 109 (418)
T ss_pred hhhhhhhhcccchhccHHH---HHHHHhcCccceEeeccCCcC
Confidence 3445555555554443211 012234444455555544443
No 54
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.03 E-value=1e-05 Score=67.93 Aligned_cols=99 Identities=23% Similarity=0.202 Sum_probs=56.2
Q ss_pred CCCCeEEccCCccccCCchhccCCCCCCEeeCccccCCCC------CCCCCCEEEccCCccccc-CCccccCCCCCcEEE
Q 045861 69 TSARALLLGNNNLIGEIPHEIGNLHNLEYLVLENNNFDGP------RHSNLERLYLERNNFSGT-IPSFIFNASKLSILG 141 (508)
Q Consensus 69 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~------~~~~L~~L~l~~~~~~~~-~~~~~~~l~~L~~L~ 141 (508)
.+...+||++|.+. ..+.|..++.|.+|.++.|+|+.+ .+++|..|.+.+|++... ..+.+..+++|++|.
T Consensus 42 d~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchh--hcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 44556666666654 223456666666666666666655 345666666666665521 223455566666666
Q ss_pred ccCccccccc---ChhhcCCCCCCEEeCCCC
Q 045861 142 IRTNSFSGTI---PSTIANLRNLQWLDLSFN 169 (508)
Q Consensus 142 l~~~~i~~~~---~~~~~~l~~L~~L~l~~n 169 (508)
+-+|.+...- .-.+..+++|+.||+.+.
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 6666654321 112445666666666554
No 55
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.00 E-value=5.6e-06 Score=52.26 Aligned_cols=36 Identities=42% Similarity=0.634 Sum_probs=16.0
Q ss_pred CCCEEECcCCcccccCcccccCCCCCCEEECCCCccc
Q 045861 382 NLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFS 418 (508)
Q Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~ 418 (508)
+|++|++++|+++ .+|..+..+++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444555555544 23333444555555555555444
No 56
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.89 E-value=5.5e-05 Score=61.43 Aligned_cols=121 Identities=16% Similarity=0.202 Sum_probs=40.5
Q ss_pred cCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCC
Q 045861 305 IGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLA 384 (508)
Q Consensus 305 ~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 384 (508)
|..+++|+.+.+.. .+..+....|..+.+|+.+.+.++ +.......+..++.++.+.+.+ .+.......|..+++|+
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 84 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLK 84 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTEC
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccc
Confidence 34444444444442 233344444444444444444442 3323333344444444444433 22222233444555555
Q ss_pred EEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCC
Q 045861 385 FFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYL 431 (508)
Q Consensus 385 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L 431 (508)
.+.+..+ +.......|.+. .++.+.+.+ .+......+|.++++|
T Consensus 85 ~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 85 NIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp EEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 5555443 332334445554 556655554 3333444555555544
No 57
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.86 E-value=8.5e-06 Score=51.42 Aligned_cols=37 Identities=46% Similarity=0.613 Sum_probs=31.4
Q ss_pred CCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcce
Q 045861 405 RSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 405 ~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~ 442 (508)
++|++|++++|++++ +|..+.++++|+.|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~~-l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQITD-LPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-SS-HGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCcc-cCchHhCCCCCCEEEecCCCCC
Confidence 479999999999995 4556999999999999999998
No 58
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.86 E-value=4.3e-06 Score=86.47 Aligned_cols=150 Identities=24% Similarity=0.305 Sum_probs=91.8
Q ss_pred CCCCeEEccCCcccc-CCchhcc-CCCCCCEeeCccccCCCC-------CCCCCCEEEccCCcccccCCccccCCCCCcE
Q 045861 69 TSARALLLGNNNLIG-EIPHEIG-NLHNLEYLVLENNNFDGP-------RHSNLERLYLERNNFSGTIPSFIFNASKLSI 139 (508)
Q Consensus 69 ~~L~~L~L~~n~l~~-~~~~~~~-~l~~L~~L~L~~n~~~~~-------~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~ 139 (508)
.+|++|++++..... ..+..++ -+|.|++|.+.+-.+... .+|+|+.||+++++++.. .++.++++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 567888887765332 2333343 367888888777665443 677777777777777633 66777888888
Q ss_pred EEccCccccc-ccChhhcCCCCCCEEeCCCCcCcCCC-CCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCe
Q 045861 140 LGIRTNSFSG-TIPSTIANLRNLQWLDLSFNYLTSST-SELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEY 217 (508)
Q Consensus 140 L~l~~~~i~~-~~~~~~~~l~~L~~L~l~~n~~~~~~-~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~ 217 (508)
|.+.+-.+.. ..-..+..+++|+.||++........ ....+++.-..++.|+.|+.++..+.+...+.+....++|+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~ 279 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQ 279 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhh
Confidence 8877766642 22223557888888888776544322 111223344456788888888777766555444444445554
Q ss_pred eEc
Q 045861 218 IYM 220 (508)
Q Consensus 218 L~l 220 (508)
+..
T Consensus 280 i~~ 282 (699)
T KOG3665|consen 280 IAA 282 (699)
T ss_pred hhh
Confidence 443
No 59
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.76 E-value=0.00017 Score=68.99 Aligned_cols=138 Identities=17% Similarity=0.216 Sum_probs=76.0
Q ss_pred ccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCC-cccccCCccccCccCC
Q 045861 257 LGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSN-VLTYVIPSTFLSLRDI 335 (508)
Q Consensus 257 l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n-~~~~~~~~~~~~~~~L 335 (508)
+..+.++++|++++|.+. .+|. + -++|++|.+++|.-...+|..+ .++|+.|++++| .+. .. .++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sL------P~sL 114 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GL------PESV 114 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cc------cccc
Confidence 445677888888888776 4442 1 2258888888765434555433 257888888877 333 11 2456
Q ss_pred cEEEccCCccccccCccccCCCCCcEEECCCCcCC-C-ccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECC
Q 045861 336 LVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLS-D-SIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLS 413 (508)
Q Consensus 336 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 413 (508)
+.|++.++.... ++ .-.++|+.|.+.+++.. . ..+. .-.++|++|++++|... ..|..+. .+|+.|+++
T Consensus 115 e~L~L~~n~~~~-L~---~LPssLk~L~I~~~n~~~~~~lp~--~LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls 185 (426)
T PRK15386 115 RSLEIKGSATDS-IK---NVPNGLTSLSINSYNPENQARIDN--LISPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLH 185 (426)
T ss_pred ceEEeCCCCCcc-cc---cCcchHhheecccccccccccccc--ccCCcccEEEecCCCcc-cCccccc--ccCcEEEec
Confidence 777776655431 11 11134556666432211 0 0111 11256777777777655 3444443 467777776
Q ss_pred CCc
Q 045861 414 NNS 416 (508)
Q Consensus 414 ~n~ 416 (508)
.+.
T Consensus 186 ~n~ 188 (426)
T PRK15386 186 IEQ 188 (426)
T ss_pred ccc
Confidence 653
No 60
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.74 E-value=0.00012 Score=59.48 Aligned_cols=122 Identities=14% Similarity=0.197 Sum_probs=51.1
Q ss_pred hhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCC
Q 045861 280 SLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVV 359 (508)
Q Consensus 280 ~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 359 (508)
.|.++++|+.+.+.+ .+.......|..+++|+.+.+.++ +.......|..+++++.+.+.+ .+.......+..++++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 455555566666553 233344455555666666666553 5545555566666666666654 3332334455556666
Q ss_pred cEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCC
Q 045861 360 VGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSL 407 (508)
Q Consensus 360 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 407 (508)
+.+++..+ +.......|.++ .|+.+.+.. .++.....+|.++++|
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 66666554 443444455665 667776665 3333444556655554
No 61
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.74 E-value=0.00017 Score=68.88 Aligned_cols=159 Identities=13% Similarity=0.122 Sum_probs=95.9
Q ss_pred hhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCC
Q 045861 233 IGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLR 312 (508)
Q Consensus 233 l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~ 312 (508)
+..+.+++.|++++|.++ .+|. -.++|++|.+++|.-...+|..+. ++|++|++++|.....+| ++|+
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP------~sLe 115 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLP------ESVR 115 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchhh--hhhhheEccCcccccccc------cccc
Confidence 455788999999999776 3451 224699999988654345665442 589999999884222333 4688
Q ss_pred EEEcCCCcccccCCccccCccCCcEEEccCCcccc--ccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcC
Q 045861 313 NLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNG--SLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAY 390 (508)
Q Consensus 313 ~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 390 (508)
.|+++.+..... -.-.++|+.|.+.+++... ..+. .-.++|++|++++|... ..|..+. .+|+.|+++.
T Consensus 116 ~L~L~~n~~~~L----~~LPssLk~L~I~~~n~~~~~~lp~--~LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~ 186 (426)
T PRK15386 116 SLEIKGSATDSI----KNVPNGLTSLSINSYNPENQARIDN--LISPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHI 186 (426)
T ss_pred eEEeCCCCCccc----ccCcchHhheecccccccccccccc--ccCCcccEEEecCCCcc-cCccccc--ccCcEEEecc
Confidence 888876554321 1122467888876533110 1111 12368999999998866 3443322 5899999987
Q ss_pred Ccccc--cCcccccCCCCCCEEECCCC
Q 045861 391 NKLQG--SIPESLGDLRSLEFLDLSNN 415 (508)
Q Consensus 391 n~l~~--~~~~~~~~l~~L~~L~L~~n 415 (508)
+.... .....+. +++ .|++.++
T Consensus 187 n~~~sLeI~~~sLP--~nl-~L~f~n~ 210 (426)
T PRK15386 187 EQKTTWNISFEGFP--DGL-DIDLQNS 210 (426)
T ss_pred cccccccCcccccc--ccc-Eechhhh
Confidence 64221 1112222 345 6777766
No 62
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.72 E-value=2.3e-05 Score=81.21 Aligned_cols=138 Identities=16% Similarity=0.187 Sum_probs=68.6
Q ss_pred hhhhCCCCCcEEecCCCcCCC-CCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCcccc-CCchhccCC
Q 045861 15 DMCQHLPRLQALDINNNHVTG-PVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIG-EIPHEIGNL 92 (508)
Q Consensus 15 ~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l 92 (508)
.+...+|.|+.|.+++-.+.. .+......+++|+.||+|+.+++.. ..++.+++|+.|.+.+-.+.. ..-..+.+|
T Consensus 142 kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L 219 (699)
T KOG3665|consen 142 KIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNL 219 (699)
T ss_pred HHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcc
Confidence 333345666666666654431 1222234556666666666666544 455566666666665554442 222344556
Q ss_pred CCCCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhh-cCCCCCCEEeC
Q 045861 93 HNLEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTI-ANLRNLQWLDL 166 (508)
Q Consensus 93 ~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~-~~l~~L~~L~l 166 (508)
++|+.||++........ .+.....+.-..+++|+.||.+++.+....-+.+ ..-++|+.+..
T Consensus 220 ~~L~vLDIS~~~~~~~~------------~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~ 282 (699)
T KOG3665|consen 220 KKLRVLDISRDKNNDDT------------KIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAA 282 (699)
T ss_pred cCCCeeeccccccccch------------HHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhh
Confidence 66666666655432110 0000001112236788888888777764433332 23455555543
No 63
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.72 E-value=6.9e-07 Score=82.89 Aligned_cols=280 Identities=17% Similarity=0.151 Sum_probs=132.8
Q ss_pred CCcEEEccCcccccc--cChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCc-cCccCCChhhhhcc
Q 045861 136 KLSILGIRTNSFSGT--IPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGN-QLHGILPSSMGNLS 212 (508)
Q Consensus 136 ~L~~L~l~~~~i~~~--~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~~~~~~~~~~~ 212 (508)
.|+.|.++++.-.+. +-..-..+++++.|.+.++.... +......-..|.+|+.+++..| .++......++...
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iT---d~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC 215 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKIT---DSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGC 215 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceecc---HHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhh
Confidence 466666666643211 11223356677777666665222 1112233345666777776663 33333333344444
Q ss_pred cccCeeEccCCcCccc--CChhhhcCCCCcEEEcccCccccc--cCccccCCCCCCcEEccCCc-Cccc-cchhhhCCCC
Q 045861 213 TSLEYIYMPYCRRSGR--IPEEIGNLINLITMSLGINKLTGS--IPISLGKLQKLQGLYLYKNK-LEGS-IPDSLCNLGR 286 (508)
Q Consensus 213 ~~L~~L~l~~~~~~~~--~~~~l~~l~~L~~L~l~~~~~~~~--~~~~l~~~~~L~~L~l~~n~-l~~~-~~~~~~~l~~ 286 (508)
++|+++.+++|.-... +-...+++.+++.+...+|.-.+. +-..-.++..+..+++..|. +++. +...-..+.+
T Consensus 216 ~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~ 295 (483)
T KOG4341|consen 216 RKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHA 295 (483)
T ss_pred hhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhH
Confidence 4666666666543221 112233444444444444322110 01111223334444444442 2211 1122233444
Q ss_pred CcEEEeeCcee-eeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCcc-ccc-cCccccCCCCCcEEE
Q 045861 287 LVELQFYDNKL-FGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSL-NGS-LPLDIGNLKVVVGID 363 (508)
Q Consensus 287 L~~L~L~~n~~-~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l-~~~-~~~~~~~l~~L~~L~ 363 (508)
|+.++.+++.. +...-. ....++.+|+.+.+.+|+- +.. +...-.+.+.|+.++
T Consensus 296 lq~l~~s~~t~~~d~~l~-----------------------aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~ 352 (483)
T KOG4341|consen 296 LQVLCYSSCTDITDEVLW-----------------------ALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLD 352 (483)
T ss_pred hhhhcccCCCCCchHHHH-----------------------HHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhc
Confidence 55555544421 111111 1123345555555555542 110 001113456677777
Q ss_pred CCCCcCCC--ccchhhhcCCCCCEEECcCCcc-ccc----CcccccCCCCCCEEECCCCccc-ccCcccccCCCCCCEEe
Q 045861 364 LSRNNLSD--SIPTVIGGLSNLAFFSLAYNKL-QGS----IPESLGDLRSLEFLDLSNNSFS-GFIPRSFEKLLYLEYLN 435 (508)
Q Consensus 364 l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l-~~~----~~~~~~~l~~L~~L~L~~n~~~-~~~~~~l~~l~~L~~L~ 435 (508)
+.++.... .+...-.+++.|+.|.+++|.. ++. ....-.++..|+.+.++++... +...+.+..+++|+.++
T Consensus 353 ~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~ 432 (483)
T KOG4341|consen 353 LEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIE 432 (483)
T ss_pred ccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceee
Confidence 76664431 1222234678888888887753 322 1222345677888888888654 34445667788888888
Q ss_pred CCCCcc
Q 045861 436 LSFNRL 441 (508)
Q Consensus 436 l~~n~l 441 (508)
+-+|+-
T Consensus 433 l~~~q~ 438 (483)
T KOG4341|consen 433 LIDCQD 438 (483)
T ss_pred eechhh
Confidence 888764
No 64
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.55 E-value=2.2e-06 Score=79.63 Aligned_cols=111 Identities=17% Similarity=0.079 Sum_probs=52.2
Q ss_pred cCCCCcEEEcccCcc-cccc-CccccCCCCCCcEEccCCcCc--cccchhhhCCCCCcEEEeeCcee-eee----CCccc
Q 045861 235 NLINLITMSLGINKL-TGSI-PISLGKLQKLQGLYLYKNKLE--GSIPDSLCNLGRLVELQFYDNKL-FGS----IPACI 305 (508)
Q Consensus 235 ~l~~L~~L~l~~~~~-~~~~-~~~l~~~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~L~~n~~-~~~----~~~~~ 305 (508)
++++|+.+.+..++- +..- ...-.+++.|+.+++.++... ..+...-.+++.|+++.++.|.. +.. ....-
T Consensus 318 ~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~ 397 (483)
T KOG4341|consen 318 HCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSS 397 (483)
T ss_pred CCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhcc
Confidence 345555555555442 1110 011123455666666555432 11222233456666666665532 211 12222
Q ss_pred CCCCCCCEEEcCCCcccc-cCCccccCccCCcEEEccCCcc
Q 045861 306 GKLSPLRNLLLHSNVLTY-VIPSTFLSLRDILVFNFSSNSL 345 (508)
Q Consensus 306 ~~~~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~L~~n~l 345 (508)
..+..|..+.+++++.+. ........+++|+.+++-+++-
T Consensus 398 c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~ 438 (483)
T KOG4341|consen 398 CSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQD 438 (483)
T ss_pred ccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhh
Confidence 345566666776665432 2233455566677777766643
No 65
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.11 E-value=0.00028 Score=62.16 Aligned_cols=86 Identities=22% Similarity=0.233 Sum_probs=36.8
Q ss_pred hCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccC--CCCCCCCcccCCCCCCCeEEccCCcccc-CCchhccCCCC
Q 045861 18 QHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHN--QLTGLIPRDIGNLTSARALLLGNNNLIG-EIPHEIGNLHN 94 (508)
Q Consensus 18 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n--~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~ 94 (508)
..+..|+.+++.+..++.. ..|-.+++|+.|.++.| ++..-++--...+++|+++++++|++.. .....+..+.+
T Consensus 40 d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~n 117 (260)
T KOG2739|consen 40 DEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELEN 117 (260)
T ss_pred ccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcc
Confidence 3344455555555544411 22444555555555555 3332222222233555555555555441 00112333444
Q ss_pred CCEeeCccccC
Q 045861 95 LEYLVLENNNF 105 (508)
Q Consensus 95 L~~L~L~~n~~ 105 (508)
|..|++..|..
T Consensus 118 L~~Ldl~n~~~ 128 (260)
T KOG2739|consen 118 LKSLDLFNCSV 128 (260)
T ss_pred hhhhhcccCCc
Confidence 44555544443
No 66
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.04 E-value=0.00045 Score=60.82 Aligned_cols=64 Identities=25% Similarity=0.257 Sum_probs=34.7
Q ss_pred CcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCC--ccccCCchhccCCCCCCEeeCccccCC
Q 045861 41 LWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNN--NLIGEIPHEIGNLHNLEYLVLENNNFD 106 (508)
Q Consensus 41 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n--~l~~~~~~~~~~l~~L~~L~L~~n~~~ 106 (508)
.-.+..|+.|++.+..++.. ..|-.+++|++|.++.| .+...++-....+++|+++++++|++.
T Consensus 39 ~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 39 TDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred cccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 33455566666666555533 34455666666666666 444333333344466666666666554
No 67
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.74 E-value=6.9e-05 Score=66.21 Aligned_cols=84 Identities=23% Similarity=0.187 Sum_probs=65.3
Q ss_pred CCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCC-chhccCCCCCCEe
Q 045861 20 LPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEI-PHEIGNLHNLEYL 98 (508)
Q Consensus 20 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L 98 (508)
+.+.++|++.++.+.++ ....+++.|++|.|+=|+|+.. ..+..+.+|+.|+|+.|.|.... ..-+.++++|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 55778899999988743 2245789999999999999865 56888999999999999887432 2336788899999
Q ss_pred eCccccCCC
Q 045861 99 VLENNNFDG 107 (508)
Q Consensus 99 ~L~~n~~~~ 107 (508)
.|..|...+
T Consensus 94 WL~ENPCc~ 102 (388)
T KOG2123|consen 94 WLDENPCCG 102 (388)
T ss_pred hhccCCccc
Confidence 998887654
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.72 E-value=6.6e-05 Score=66.32 Aligned_cols=87 Identities=24% Similarity=0.212 Sum_probs=66.3
Q ss_pred CCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCc-ccccCCCCCCEE
Q 045861 356 LKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIP-RSFEKLLYLEYL 434 (508)
Q Consensus 356 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L 434 (508)
+.+.+.|++-+|.+.++ .....++.|+.|.|+-|+|+.. ..+..+++|++|+|..|.|.+.-. +-+.++|+|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 55677888889888853 3456789999999999999854 447888999999999998885321 356788999999
Q ss_pred eCCCCcceecCC
Q 045861 435 NLSFNRLKGEIP 446 (508)
Q Consensus 435 ~l~~n~l~~~~p 446 (508)
.|..|+=.+.-+
T Consensus 94 WL~ENPCc~~ag 105 (388)
T KOG2123|consen 94 WLDENPCCGEAG 105 (388)
T ss_pred hhccCCcccccc
Confidence 999998654433
No 69
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.47 E-value=0.00037 Score=70.79 Aligned_cols=108 Identities=18% Similarity=0.101 Sum_probs=48.7
Q ss_pred ccCeeEccCCcCccc--CChhhhcCCCCcEEEcccC-ccccc----cCccccCCCCCCcEEccCCc-Cccccchhhh-CC
Q 045861 214 SLEYIYMPYCRRSGR--IPEEIGNLINLITMSLGIN-KLTGS----IPISLGKLQKLQGLYLYKNK-LEGSIPDSLC-NL 284 (508)
Q Consensus 214 ~L~~L~l~~~~~~~~--~~~~l~~l~~L~~L~l~~~-~~~~~----~~~~l~~~~~L~~L~l~~n~-l~~~~~~~~~-~l 284 (508)
.++.+.+..+..... .......+++|+.|+++.+ ..... .......+++|+.++++.+. +++.....+. .+
T Consensus 189 ~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~~c 268 (482)
T KOG1947|consen 189 LLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALASRC 268 (482)
T ss_pred hhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHhhC
Confidence 555555555433332 2233445566666666542 11100 11122334556666666655 4433222222 25
Q ss_pred CCCcEEEeeCce-eeee-CCcccCCCCCCCEEEcCCCcc
Q 045861 285 GRLVELQFYDNK-LFGS-IPACIGKLSPLRNLLLHSNVL 321 (508)
Q Consensus 285 ~~L~~L~L~~n~-~~~~-~~~~~~~~~~L~~L~l~~n~~ 321 (508)
++|++|.+.+|. ++.. +......+++|++|++++|..
T Consensus 269 ~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 269 PNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred CCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 566666655554 2221 122223455566666665544
No 70
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.25 E-value=0.00049 Score=69.88 Aligned_cols=238 Identities=19% Similarity=0.119 Sum_probs=111.7
Q ss_pred CCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCc-cCccCC---ChhhhhcccccCeeEccCCc-CcccCChh
Q 045861 158 LRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGN-QLHGIL---PSSMGNLSTSLEYIYMPYCR-RSGRIPEE 232 (508)
Q Consensus 158 l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~~~---~~~~~~~~~~L~~L~l~~~~-~~~~~~~~ 232 (508)
++.|+.+.+.++.-.... ........++.|+.|+++++ ...... ...+......++.++++++. ++...-..
T Consensus 187 ~~~L~~l~l~~~~~~~~~---~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~ 263 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDD---SLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSA 263 (482)
T ss_pred CchhhHhhhcccccCChh---hHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHH
Confidence 455666655554321110 01233455566666666552 111111 11223333466666666665 33222222
Q ss_pred hh-cCCCCcEEEcccCc-cccc-cCccccCCCCCCcEEccCCcCc-c-ccchhhhCCCCCcEEEeeCceeeeeCCcccCC
Q 045861 233 IG-NLINLITMSLGINK-LTGS-IPISLGKLQKLQGLYLYKNKLE-G-SIPDSLCNLGRLVELQFYDNKLFGSIPACIGK 307 (508)
Q Consensus 233 l~-~l~~L~~L~l~~~~-~~~~-~~~~l~~~~~L~~L~l~~n~l~-~-~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~ 307 (508)
+. .+++|++|.+.++. ++.. +......++.|++|+++++... + .+......+++++.+.+.....
T Consensus 264 l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~---------- 333 (482)
T KOG1947|consen 264 LASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNG---------- 333 (482)
T ss_pred HHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCC----------
Confidence 33 26777777766665 3322 2223345677888888877542 1 1223344466666655443321
Q ss_pred CCCCCEEEcCCCccc---ccCCccccCccCCcEEEccCCcccccc-CccccCCCCCcEEECCCCcCCCccchhhhcCCCC
Q 045861 308 LSPLRNLLLHSNVLT---YVIPSTFLSLRDILVFNFSSNSLNGSL-PLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNL 383 (508)
Q Consensus 308 ~~~L~~L~l~~n~~~---~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 383 (508)
++.++.+.+.+.... .........++.++.+.+..+...... ...+.+++.|+ . ...........+
T Consensus 334 c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~-~---------~l~~~~~~~~~l 403 (482)
T KOG1947|consen 334 CPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLT-E---------SLELRLCRSDSL 403 (482)
T ss_pred CccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccc-h---------HHHHHhccCCcc
Confidence 444555555443331 222334556677777777776633111 12223333331 1 111111222337
Q ss_pred CEEECcCCcccc-cCcccccC-CCCCCEEECCCCccc
Q 045861 384 AFFSLAYNKLQG-SIPESLGD-LRSLEFLDLSNNSFS 418 (508)
Q Consensus 384 ~~L~L~~n~l~~-~~~~~~~~-l~~L~~L~L~~n~~~ 418 (508)
+.|+++.+.... ..-..... +..++.+++.++...
T Consensus 404 ~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~~ 440 (482)
T KOG1947|consen 404 RVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRVI 440 (482)
T ss_pred ceEecccCccccccchHHHhhhhhccccCCccCcccc
Confidence 888888776432 11122222 556777777777554
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.82 E-value=0.014 Score=30.36 Aligned_cols=19 Identities=37% Similarity=0.457 Sum_probs=9.2
Q ss_pred CCeEEccCCccccCCchhcc
Q 045861 71 ARALLLGNNNLIGEIPHEIG 90 (508)
Q Consensus 71 L~~L~L~~n~l~~~~~~~~~ 90 (508)
|++|++++|+++ .+|..|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555555 4444333
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=94.69 E-value=0.013 Score=30.52 Aligned_cols=11 Identities=55% Similarity=0.975 Sum_probs=4.2
Q ss_pred CEEECCCCccc
Q 045861 408 EFLDLSNNSFS 418 (508)
Q Consensus 408 ~~L~L~~n~~~ 418 (508)
++||+++|+++
T Consensus 3 ~~Ldls~n~l~ 13 (22)
T PF00560_consen 3 EYLDLSGNNLT 13 (22)
T ss_dssp SEEEETSSEES
T ss_pred cEEECCCCcCE
Confidence 33333333333
No 73
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=94.67 E-value=0.00064 Score=58.65 Aligned_cols=93 Identities=18% Similarity=0.261 Sum_probs=80.8
Q ss_pred CCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhcc
Q 045861 11 SLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIG 90 (508)
Q Consensus 11 ~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 90 (508)
++|..-...+...+.||++.|.+. .+...|+.+..|..|+++.|.+. ..|..+++...++++++..|... ..|.+++
T Consensus 32 ~~~v~ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~ 108 (326)
T KOG0473|consen 32 EIPVREIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQK 108 (326)
T ss_pred ccchhhhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCcccc
Confidence 566444467889999999999987 56677889999999999999887 77899999999999999999887 8899999
Q ss_pred CCCCCCEeeCccccCC
Q 045861 91 NLHNLEYLVLENNNFD 106 (508)
Q Consensus 91 ~l~~L~~L~L~~n~~~ 106 (508)
..++++++++.++.+.
T Consensus 109 k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 109 KEPHPKKNEQKKTEFF 124 (326)
T ss_pred ccCCcchhhhccCcch
Confidence 9999999999998754
No 74
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.24 E-value=0.0002 Score=71.03 Aligned_cols=181 Identities=25% Similarity=0.226 Sum_probs=86.1
Q ss_pred CcEEEcccCccccc----cCccccCCCCCCcEEccCCcCccccchhh----hCC-CCCcEEEeeCceeeeeC----Cccc
Q 045861 239 LITMSLGINKLTGS----IPISLGKLQKLQGLYLYKNKLEGSIPDSL----CNL-GRLVELQFYDNKLFGSI----PACI 305 (508)
Q Consensus 239 L~~L~l~~~~~~~~----~~~~l~~~~~L~~L~l~~n~l~~~~~~~~----~~l-~~L~~L~L~~n~~~~~~----~~~~ 305 (508)
+..+.+.+|.+... +...+...+.|+.|++++|.+.+.-...+ ... ..+++|++..|.++... ...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 66677777766532 23345556777778888777764322222 111 34555666666554322 2333
Q ss_pred CCCCCCCEEEcCCCccccc----CCc----cccCccCCcEEEccCCcccccc----CccccCCCC-CcEEECCCCcCCCc
Q 045861 306 GKLSPLRNLLLHSNVLTYV----IPS----TFLSLRDILVFNFSSNSLNGSL----PLDIGNLKV-VVGIDLSRNNLSDS 372 (508)
Q Consensus 306 ~~~~~L~~L~l~~n~~~~~----~~~----~~~~~~~L~~L~L~~n~l~~~~----~~~~~~l~~-L~~L~l~~n~l~~~ 372 (508)
.....++.++++.|.+... .+. .+....++++|++..|.++... ...+...+. +..+++..|.+.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 4456666666666665311 111 1223445555666655554211 112222333 44455555555533
Q ss_pred cc----hhhhcC-CCCCEEECcCCcccccC----cccccCCCCCCEEECCCCcccc
Q 045861 373 IP----TVIGGL-SNLAFFSLAYNKLQGSI----PESLGDLRSLEFLDLSNNSFSG 419 (508)
Q Consensus 373 ~~----~~~~~l-~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~~~~ 419 (508)
.. ..+..+ ..++.++++.|.++... ...+..++.++.+.+++|.+..
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 11 122223 34455555555554322 2333344455555555555543
No 75
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.81 E-value=0.052 Score=26.18 Aligned_cols=13 Identities=54% Similarity=0.741 Sum_probs=5.2
Q ss_pred CCCEEECCCCccc
Q 045861 406 SLEFLDLSNNSFS 418 (508)
Q Consensus 406 ~L~~L~L~~n~~~ 418 (508)
+|++|++++|+++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4555555555544
No 76
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.14 E-value=0.025 Score=48.07 Aligned_cols=79 Identities=27% Similarity=0.139 Sum_probs=32.8
Q ss_pred cEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccC-cccc-cCCCCCCEEECCCC-cccccCcccccCCCCCCEEeC
Q 045861 360 VGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSI-PESL-GDLRSLEFLDLSNN-SFSGFIPRSFEKLLYLEYLNL 436 (508)
Q Consensus 360 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~-~~l~~L~~L~L~~n-~~~~~~~~~l~~l~~L~~L~l 436 (508)
+.+|-+++.|..+.-+-+.++++++.|.+.+|.=-+.. .+.+ +-.++|+.|+|++| +|++..-..+..+++|+.|.+
T Consensus 104 eaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l 183 (221)
T KOG3864|consen 104 EAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRLHL 183 (221)
T ss_pred EEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHHHh
Confidence 34444444444444444444455555555444321100 0000 11245555555555 344433344444455555544
Q ss_pred CC
Q 045861 437 SF 438 (508)
Q Consensus 437 ~~ 438 (508)
.+
T Consensus 184 ~~ 185 (221)
T KOG3864|consen 184 YD 185 (221)
T ss_pred cC
Confidence 43
No 77
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.38 E-value=0.17 Score=27.43 Aligned_cols=15 Identities=53% Similarity=0.682 Sum_probs=7.1
Q ss_pred CCCEEECCCCccccc
Q 045861 406 SLEFLDLSNNSFSGF 420 (508)
Q Consensus 406 ~L~~L~L~~n~~~~~ 420 (508)
+|+.|+|++|++...
T Consensus 3 ~L~~L~L~~N~l~~l 17 (26)
T smart00370 3 NLRELDLSNNQLSSL 17 (26)
T ss_pred CCCEEECCCCcCCcC
Confidence 444455555544433
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.38 E-value=0.17 Score=27.43 Aligned_cols=15 Identities=53% Similarity=0.682 Sum_probs=7.1
Q ss_pred CCCEEECCCCccccc
Q 045861 406 SLEFLDLSNNSFSGF 420 (508)
Q Consensus 406 ~L~~L~L~~n~~~~~ 420 (508)
+|+.|+|++|++...
T Consensus 3 ~L~~L~L~~N~l~~l 17 (26)
T smart00369 3 NLRELDLSNNQLSSL 17 (26)
T ss_pred CCCEEECCCCcCCcC
Confidence 444455555544433
No 79
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.02 E-value=0.039 Score=47.00 Aligned_cols=82 Identities=18% Similarity=0.095 Sum_probs=50.8
Q ss_pred CCcEEEcccCccccccCccccCCCCCCcEEccCCcCcccc--chhhhCCCCCcEEEeeCc-eeeeeCCcccCCCCCCCEE
Q 045861 238 NLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSI--PDSLCNLGRLVELQFYDN-KLFGSIPACIGKLSPLRNL 314 (508)
Q Consensus 238 ~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~L~~n-~~~~~~~~~~~~~~~L~~L 314 (508)
.++.++-+++.+..+-.+.+..++.++.|.+.+|.--+.. ...-.-.++|+.|++++| .|+...-.++.++++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 4667777777776666666677777777777777532111 111123567777777777 5665555666667777777
Q ss_pred EcCCC
Q 045861 315 LLHSN 319 (508)
Q Consensus 315 ~l~~n 319 (508)
.+.+-
T Consensus 182 ~l~~l 186 (221)
T KOG3864|consen 182 HLYDL 186 (221)
T ss_pred HhcCc
Confidence 66653
No 80
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=89.86 E-value=0.0069 Score=52.50 Aligned_cols=89 Identities=21% Similarity=0.186 Sum_probs=73.1
Q ss_pred ccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCC
Q 045861 351 LDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLY 430 (508)
Q Consensus 351 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~ 430 (508)
..+..+...+.||++.|++. ..-.-|+-++.+..|+++.|.+. ..|+.+.+...++.+++.+|..+ ..|.++...+.
T Consensus 36 ~ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~ 112 (326)
T KOG0473|consen 36 REIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPH 112 (326)
T ss_pred hhhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCC
Confidence 34566777888899998877 34445677788999999999987 77888888888899999999888 67888999999
Q ss_pred CCEEeCCCCcce
Q 045861 431 LEYLNLSFNRLK 442 (508)
Q Consensus 431 L~~L~l~~n~l~ 442 (508)
+++++..+|++.
T Consensus 113 ~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 113 PKKNEQKKTEFF 124 (326)
T ss_pred cchhhhccCcch
Confidence 999999999865
No 81
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=89.24 E-value=0.32 Score=26.34 Aligned_cols=13 Identities=46% Similarity=0.646 Sum_probs=6.0
Q ss_pred CCcEEEcccCCCC
Q 045861 46 ELIAISLSHNQLT 58 (508)
Q Consensus 46 ~L~~L~L~~n~l~ 58 (508)
+|++|+|++|+++
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00370 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 4444444444444
No 82
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=89.24 E-value=0.32 Score=26.34 Aligned_cols=13 Identities=46% Similarity=0.646 Sum_probs=6.0
Q ss_pred CCcEEEcccCCCC
Q 045861 46 ELIAISLSHNQLT 58 (508)
Q Consensus 46 ~L~~L~L~~n~l~ 58 (508)
+|++|+|++|+++
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00369 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 4444444444444
No 83
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=88.04 E-value=0.0031 Score=62.75 Aligned_cols=39 Identities=26% Similarity=0.275 Sum_probs=24.2
Q ss_pred CCCcEEEcccCccccc----cCccccCCCCCCcEEccCCcCcc
Q 045861 237 INLITMSLGINKLTGS----IPISLGKLQKLQGLYLYKNKLEG 275 (508)
Q Consensus 237 ~~L~~L~l~~~~~~~~----~~~~l~~~~~L~~L~l~~n~l~~ 275 (508)
..+++++++.|.++.. ....+..++.++.+.++.|.+.+
T Consensus 262 ~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 262 ETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 4556777777776543 22334456677777777777653
No 84
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=87.11 E-value=0.11 Score=27.60 Aligned_cols=13 Identities=62% Similarity=0.807 Sum_probs=4.6
Q ss_pred CCCEEECCCCccc
Q 045861 406 SLEFLDLSNNSFS 418 (508)
Q Consensus 406 ~L~~L~L~~n~~~ 418 (508)
+|++|+|++|+++
T Consensus 3 ~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 3 NLETLDLSNNQIT 15 (24)
T ss_dssp T-SEEE-TSSBEH
T ss_pred CCCEEEccCCcCC
Confidence 3444444444433
No 85
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=86.69 E-value=0.25 Score=58.19 Aligned_cols=33 Identities=30% Similarity=0.276 Sum_probs=18.7
Q ss_pred ECCCCcccccCcccccCCCCCCEEeCCCCccee
Q 045861 411 DLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKG 443 (508)
Q Consensus 411 ~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 443 (508)
||++|+|+.+.+..|..+++|+.|+|++|++.+
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~C 33 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFEC 33 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCcccc
Confidence 455666665555555556666655555554443
No 86
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=79.68 E-value=1.3 Score=23.99 Aligned_cols=18 Identities=39% Similarity=0.505 Sum_probs=13.6
Q ss_pred CCCCEEeCCCCcceecCCC
Q 045861 429 LYLEYLNLSFNRLKGEIPS 447 (508)
Q Consensus 429 ~~L~~L~l~~n~l~~~~p~ 447 (508)
++|++|++++|+++ .+|+
T Consensus 2 ~~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLT-SLPE 19 (26)
T ss_pred cccceeecCCCccc-cCcc
Confidence 45788888888887 6776
No 87
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=73.36 E-value=1.7 Score=43.21 Aligned_cols=60 Identities=32% Similarity=0.404 Sum_probs=28.2
Q ss_pred CCCCCcEEEcccCCCCCCCCcccC----CCCCCCeEEccCC--ccccCCchhccCC--CCCCEeeCccccCC
Q 045861 43 QCQELIAISLSHNQLTGLIPRDIG----NLTSARALLLGNN--NLIGEIPHEIGNL--HNLEYLVLENNNFD 106 (508)
Q Consensus 43 ~~~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~n--~l~~~~~~~~~~l--~~L~~L~L~~n~~~ 106 (508)
+.+.+..++|++|++... +.+. ..+.|+.|+|++| .+. ....+.++ ..|++|-+.+|.++
T Consensus 216 n~p~i~sl~lsnNrL~~L--d~~sslsq~apklk~L~LS~N~~~~~--~~~el~K~k~l~Leel~l~GNPlc 283 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHL--DALSSLSQIAPKLKTLDLSHNHSKIS--SESELDKLKGLPLEELVLEGNPLC 283 (585)
T ss_pred CCcceeeeecccchhhch--hhhhHHHHhcchhheeecccchhhhc--chhhhhhhcCCCHHHeeecCCccc
Confidence 345555566666655432 2221 2355666666666 222 11222222 24555666666554
No 88
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=71.74 E-value=3.6 Score=22.39 Aligned_cols=14 Identities=50% Similarity=0.596 Sum_probs=7.8
Q ss_pred CCCCEEECCCCccc
Q 045861 405 RSLEFLDLSNNSFS 418 (508)
Q Consensus 405 ~~L~~L~L~~n~~~ 418 (508)
++|+.|+++.|+|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 34555555555554
No 89
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=65.03 E-value=4.9 Score=22.18 Aligned_cols=13 Identities=38% Similarity=0.539 Sum_probs=6.4
Q ss_pred CCcEEECCCCcCC
Q 045861 358 VVVGIDLSRNNLS 370 (508)
Q Consensus 358 ~L~~L~l~~n~l~ 370 (508)
+|++|+|++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 3445555555544
No 90
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=56.69 E-value=5.2 Score=39.93 Aligned_cols=65 Identities=23% Similarity=0.274 Sum_probs=38.3
Q ss_pred cCCCCCcEEECCCCcCCCc--cchhhhcCCCCCEEECcCC--cccccC-cccccCCCCCCEEECCCCcccc
Q 045861 354 GNLKVVVGIDLSRNNLSDS--IPTVIGGLSNLAFFSLAYN--KLQGSI-PESLGDLRSLEFLDLSNNSFSG 419 (508)
Q Consensus 354 ~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~L~~n--~l~~~~-~~~~~~l~~L~~L~L~~n~~~~ 419 (508)
...+.+..+.+++|++... ....-...|.|+.|+|++| .+.... .+.+.. ..|++|.+.||.+.+
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~-l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKG-LPLEELVLEGNPLCT 284 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcC-CCHHHeeecCCcccc
Confidence 4556777788888877632 1222345678888888888 333110 111222 347788888887754
No 91
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=55.85 E-value=5.9 Score=47.58 Aligned_cols=33 Identities=27% Similarity=0.325 Sum_probs=24.8
Q ss_pred ECcCCcccccCcccccCCCCCCEEECCCCcccc
Q 045861 387 SLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSG 419 (508)
Q Consensus 387 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~ 419 (508)
+|++|+|+...+..|..+++|+.|+|++|.+..
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~C 33 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFEC 33 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCcccc
Confidence 467788876666777778888888888887764
No 92
>smart00082 LRRCT Leucine rich repeat C-terminal domain.
Probab=50.72 E-value=5.1 Score=25.73 Aligned_cols=11 Identities=27% Similarity=0.525 Sum_probs=9.4
Q ss_pred CCCCCCCCCCC
Q 045861 462 NSFLCGSPNLQ 472 (508)
Q Consensus 462 n~~~c~~~~~~ 472 (508)
|||.|+|.+..
T Consensus 1 NP~~CdC~l~~ 11 (51)
T smart00082 1 NPFICDCELRW 11 (51)
T ss_pred CCccCcCCchH
Confidence 89999998764
No 93
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=50.13 E-value=12 Score=20.01 Aligned_cols=13 Identities=31% Similarity=0.046 Sum_probs=10.2
Q ss_pred CCCCCEEeCCCCc
Q 045861 428 LLYLEYLNLSFNR 440 (508)
Q Consensus 428 l~~L~~L~l~~n~ 440 (508)
+++|++|++++|+
T Consensus 1 c~~L~~L~l~~C~ 13 (26)
T smart00367 1 CPNLRELDLSGCT 13 (26)
T ss_pred CCCCCEeCCCCCC
Confidence 4678888888886
No 94
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=47.95 E-value=1.2e+02 Score=30.14 Aligned_cols=273 Identities=14% Similarity=0.059 Sum_probs=0.0
Q ss_pred CCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCC------CCCCEEEccCccCccCCChhh
Q 045861 135 SKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNC------RNLKVIDLTGNQLHGILPSSM 208 (508)
Q Consensus 135 ~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~------~~L~~L~l~~~~~~~~~~~~~ 208 (508)
+.+++++++.|.+....|..+..-..= +.+..+..+. ..+..+ ..+.+++++.+.....++...
T Consensus 165 pr~r~~dls~npi~dkvpihl~~p~~p--l~lr~c~lss--------kfis~l~~qsg~~~lteldls~n~~Kddip~~~ 234 (553)
T KOG4242|consen 165 PRARQHDLSPNPIGDKVPIHLPQPGNP--LSLRVCELSS--------KFISKLLIQSGRLWLTELDLSTNGGKDDIPRTL 234 (553)
T ss_pred chhhhhccCCCcccccCCccccCCCCc--cchhhhhhhh--------hHHHHhhhhhccccccccccccCCCCccchhHH
Q ss_pred hhcccccCeeEccCCcCcccC-----ChhhhcCCCCcEEEcccCc--------cccccCccccCCCCCCcEEccCCcCcc
Q 045861 209 GNLSTSLEYIYMPYCRRSGRI-----PEEIGNLINLITMSLGINK--------LTGSIPISLGKLQKLQGLYLYKNKLEG 275 (508)
Q Consensus 209 ~~~~~~L~~L~l~~~~~~~~~-----~~~l~~l~~L~~L~l~~~~--------~~~~~~~~l~~~~~L~~L~l~~n~l~~ 275 (508)
.....++-.-++..+.....+ +........++..+++.|. ..+..-..+..-.++ +|++..+..-.
T Consensus 235 n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k~~fS~~~sg-hln~~~~~~ps 313 (553)
T KOG4242|consen 235 NKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEKDTFSPDPSG-HLNSRPRYTPS 313 (553)
T ss_pred HHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCCCCcccccccccccccccCcCccc-ccccccccCch
Q ss_pred ccchhh------hCCCCCcEEEeeCc-eeeeeCCcccCCCCCCCEEEcCCCcccccCC--ccccCccCCcEEEccCCccc
Q 045861 276 SIPDSL------CNLGRLVELQFYDN-KLFGSIPACIGKLSPLRNLLLHSNVLTYVIP--STFLSLRDILVFNFSSNSLN 346 (508)
Q Consensus 276 ~~~~~~------~~l~~L~~L~L~~n-~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~--~~~~~~~~L~~L~L~~n~l~ 346 (508)
+-+..+ ..-..=-++++..| .-.+..-..-..-..+++|.+..|...+... .....-++.+.+++.+-...
T Consensus 314 E~lks~LLgla~ne~t~g~rldl~~cp~~~a~vleaci~g~R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~k 393 (553)
T KOG4242|consen 314 EKLKSMLLGLAENEATLGARLDLRRCPLERAEVLEACIFGQRVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDK 393 (553)
T ss_pred hhhhhhhcccccccccccccCChhhccccccchhhccccceeeeEeeccccccccccccccceeeccccccccccccCCc
Q ss_pred cccCccc---------cCCCCCcEEECCCCcCCCccchh---hhcCCCCCEEECcCCcccc----cCcccccCCCCCCEE
Q 045861 347 GSLPLDI---------GNLKVVVGIDLSRNNLSDSIPTV---IGGLSNLAFFSLAYNKLQG----SIPESLGDLRSLEFL 410 (508)
Q Consensus 347 ~~~~~~~---------~~l~~L~~L~l~~n~l~~~~~~~---~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L 410 (508)
....... ....-+..+.++.|......-.. ..+.+.+.+|++++|...+ .+|.+++...+++.+
T Consensus 394 qvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~i 473 (553)
T KOG4242|consen 394 QVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPI 473 (553)
T ss_pred eeccccccchhhhhhhcccccccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCCCCcCccccCCCCccCCC
Q ss_pred ECCCCccc
Q 045861 411 DLSNNSFS 418 (508)
Q Consensus 411 ~L~~n~~~ 418 (508)
..+.|...
T Consensus 474 pds~n~p~ 481 (553)
T KOG4242|consen 474 PDSLNLPE 481 (553)
T ss_pred CCCCCCcc
Done!