Query 045861
Match_columns 508
No_of_seqs 267 out of 3772
Neff 10.6
Searched_HMMs 13730
Date Mon Mar 25 10:39:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045861.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045861hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 5.1E-30 3.7E-34 241.0 20.9 258 214-476 51-312 (313)
2 d2omza2 c.10.2.1 (A:33-416) In 100.0 1E-27 7.6E-32 232.2 34.5 192 232-439 192-383 (384)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 3.2E-26 2.3E-30 221.6 30.9 356 27-462 28-383 (384)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 5.3E-27 3.9E-31 220.2 19.8 251 189-443 51-305 (313)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 2.9E-24 2.1E-28 200.7 28.3 245 22-298 11-255 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.8E-23 1.3E-27 195.2 28.5 246 189-442 32-285 (305)
7 d1p9ag_ c.10.2.7 (G:) von Will 99.9 1.2E-24 8.8E-29 198.6 19.5 204 260-470 9-213 (266)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 1.1E-24 8.3E-29 201.0 19.5 206 238-443 33-239 (284)
9 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 9E-25 6.6E-29 201.7 17.3 226 242-470 16-243 (284)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 9E-22 6.5E-26 179.3 21.1 203 235-444 8-210 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 3.2E-17 2.3E-21 155.5 35.5 137 22-201 39-175 (353)
12 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 7E-22 5.1E-26 195.3 1.7 354 22-394 3-410 (460)
13 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 3.4E-17 2.5E-21 155.4 32.5 307 1-389 43-352 (353)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 5.7E-21 4.1E-25 188.7 1.9 381 46-442 3-439 (460)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.6E-17 1.2E-21 147.0 17.0 189 233-437 37-225 (227)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 2E-17 1.5E-21 146.4 15.9 202 242-460 24-225 (227)
17 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 6E-18 4.4E-22 145.5 11.2 176 289-470 12-188 (192)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.8E-17 1.3E-21 148.5 14.4 198 238-436 30-232 (242)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 2.5E-17 1.8E-21 147.5 14.2 103 2-108 14-118 (242)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 9.7E-17 7.1E-21 139.8 16.8 157 3-172 31-191 (210)
21 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 1.1E-17 8.2E-22 143.7 10.6 156 311-469 10-166 (192)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.9E-16 1.4E-20 136.7 17.9 162 3-202 25-186 (199)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.2E-16 9E-21 139.1 14.3 166 259-438 44-209 (210)
24 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.9E-16 1.4E-20 136.7 15.4 163 258-434 37-199 (199)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 8.6E-16 6.3E-20 140.4 9.4 62 378-439 172-235 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.6 1.2E-15 8.5E-20 139.5 7.5 83 112-198 47-131 (284)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 9E-16 6.6E-20 144.8 5.4 262 151-442 23-315 (344)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 6.7E-15 4.9E-19 121.7 9.7 127 18-165 15-145 (162)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 1.3E-14 9.6E-19 119.9 9.9 126 307-435 16-145 (162)
30 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 1.7E-15 1.2E-19 143.0 4.5 254 126-419 22-316 (344)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.5 3.5E-14 2.6E-18 111.4 11.4 78 24-106 1-78 (124)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 99.5 8.6E-15 6.2E-19 120.2 7.9 111 359-471 10-122 (156)
33 d1dcea3 c.10.2.2 (A:444-567) R 99.5 7.3E-14 5.3E-18 109.6 12.3 102 336-442 1-103 (124)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 3E-12 2.2E-16 104.7 12.3 109 333-443 8-117 (156)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 3.7E-14 2.7E-18 121.4 -3.6 149 22-194 24-180 (198)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 3.4E-14 2.5E-18 121.7 -4.1 80 263-346 25-106 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.4 1.1E-08 8E-13 83.6 -0.6 82 354-435 62-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.2 5.1E-08 3.7E-12 79.5 -0.6 40 133-172 89-128 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 98.1 1.9E-06 1.4E-10 70.3 6.2 110 332-441 14-143 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.8 7E-06 5.1E-10 66.8 4.3 118 18-146 12-142 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.6 2.1E-05 1.6E-09 63.8 4.1 111 331-441 15-144 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.0 7.7E-05 5.6E-09 60.4 0.8 19 183-201 41-59 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97 E-value=5.1e-30 Score=241.04 Aligned_cols=258 Identities=33% Similarity=0.528 Sum_probs=224.8
Q ss_pred ccCeeEccCCcCcc--cCChhhhcCCCCcEEEccc-CccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEE
Q 045861 214 SLEYIYMPYCRRSG--RIPEEIGNLINLITMSLGI-NKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVEL 290 (508)
Q Consensus 214 ~L~~L~l~~~~~~~--~~~~~l~~l~~L~~L~l~~-~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 290 (508)
+++.|+++++.+.+ .+|..+..+++|++|++++ |.+.+.+|..++++++|++|++++|.+.+..+..+..+++|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 46666666666655 4677888889999999986 77887888889999999999999999888888888889999999
Q ss_pred EeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCC-cEEEccCCccccccCccccCCCCCcEEECCCCcC
Q 045861 291 QFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDI-LVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNL 369 (508)
Q Consensus 291 ~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 369 (508)
+++.|.+....|..+..++.++.+++++|.+.+..+..+..+..+ +.+++++|++++..+..+..+..+ .++++++..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 999998888888889999999999999999988888777777665 889999999998888888777554 799999999
Q ss_pred CCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCcc
Q 045861 370 SDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSGE 449 (508)
Q Consensus 370 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~ 449 (508)
.+..+..+..+++++.+++++|.+.+.++ .+..+++|+.|++++|++++.+|+.|.++++|++|++++|+++|.+|...
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~ 288 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcc
Confidence 88889989999999999999999986554 57889999999999999999999999999999999999999999999887
Q ss_pred ccCCCCcccccCCCCCCCCCCCCCCCC
Q 045861 450 SFANFSDNSFMGNSFLCGSPNLQVPPR 476 (508)
Q Consensus 450 ~~~~l~~l~l~~n~~~c~~~~~~~~~~ 476 (508)
.+.+|+.+++.+|+.+|+.|. |+|
T Consensus 289 ~L~~L~~l~l~~N~~l~g~pl---p~c 312 (313)
T d1ogqa_ 289 NLQRFDVSAYANNKCLCGSPL---PAC 312 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTS---SCC
T ss_pred cCCCCCHHHhCCCccccCCCC---CCC
Confidence 889999999999999999774 677
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.97 E-value=1e-27 Score=232.18 Aligned_cols=192 Identities=27% Similarity=0.388 Sum_probs=132.0
Q ss_pred hhhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCC
Q 045861 232 EIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPL 311 (508)
Q Consensus 232 ~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L 311 (508)
....+++++.++++++.+.+..+ ...+++|++|++++|.+++ + ..+..+++|+.+++++|.+.+.. .+..+++|
T Consensus 192 ~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L 265 (384)
T d2omza2 192 VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLA--PLSGLTKL 265 (384)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTC
T ss_pred ccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCC--cccccccC
Confidence 45566677777777777664433 3456677777777777763 2 34666777777777777765332 25667777
Q ss_pred CEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCC
Q 045861 312 RNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYN 391 (508)
Q Consensus 312 ~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 391 (508)
++|+++++.+.... .+..++.++.++++.|.+.+. ..+..+++++.|++++|++.+.. .+..+++|++|++++|
T Consensus 266 ~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n 339 (384)
T d2omza2 266 TELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANN 339 (384)
T ss_dssp SEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSS
T ss_pred CEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCC
Confidence 77777777776443 356677777777777777632 24666777888888888777543 2677788888888888
Q ss_pred cccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCC
Q 045861 392 KLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFN 439 (508)
Q Consensus 392 ~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n 439 (508)
++++ ++ .+.++++|++|++++|++++..| +.++++|+.|++++|
T Consensus 340 ~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 340 KVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 8773 33 47777888888888888876543 777788888888776
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=3.2e-26 Score=221.58 Aligned_cols=356 Identities=21% Similarity=0.310 Sum_probs=243.0
Q ss_pred ecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeCccccCC
Q 045861 27 DINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVLENNNFD 106 (508)
Q Consensus 27 ~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~ 106 (508)
.++...+++.+. ...+.+|++|++++++++.. +.+..+++|++|++++|++++. + .++++++|++|++++|.+.
T Consensus 28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l-~-~l~~L~~L~~L~L~~n~i~ 101 (384)
T d2omza2 28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDI-T-PLKNLTKLVDILMNNNQIA 101 (384)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred HhCCCCCCCccC--HHHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCC-c-cccCCcccccccccccccc
Confidence 455555554332 34566788888888877754 4567777788888888777633 2 3677777777777776654
Q ss_pred CCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccC
Q 045861 107 GPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRN 186 (508)
Q Consensus 107 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~ 186 (508)
. + ..+..+++|+.+++.++.+++..+ ......+.......+.+...... ..
T Consensus 102 ~-------------------i-~~l~~l~~L~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~-------~~ 152 (384)
T d2omza2 102 D-------------------I-TPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISAL-------SG 152 (384)
T ss_dssp C-------------------C-GGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGG-------TT
T ss_pred c-------------------c-cccccccccccccccccccccccc--ccccccccccccccccccccccc-------cc
Confidence 1 1 225556666666666665553222 22333444444443333221100 00
Q ss_pred CCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcE
Q 045861 187 CRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGL 266 (508)
Q Consensus 187 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L 266 (508)
....... ...... .....+.............+... .......+++++.+
T Consensus 153 ~~~~~~~-----------------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l 202 (384)
T d2omza2 153 LTSLQQL-----------------------SFGNQV-----TDLKPLANLTTLERLDISSNKVS--DISVLAKLTNLESL 202 (384)
T ss_dssp CTTCSEE-----------------------EEEESC-----CCCGGGTTCTTCCEEECCSSCCC--CCGGGGGCTTCSEE
T ss_pred ccccccc-----------------------cccccc-----chhhhhccccccccccccccccc--ccccccccccccee
Confidence 0000000 000000 11122334444455555555443 34556788999999
Q ss_pred EccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccc
Q 045861 267 YLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLN 346 (508)
Q Consensus 267 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~ 346 (508)
.+++|.+.+..+ +...++|++|++++|.+.. ...+..+++|+.|++++|.+++.. .+..+++|+++++++++++
T Consensus 203 ~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~ 276 (384)
T d2omza2 203 IATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQIS 276 (384)
T ss_dssp ECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCC
T ss_pred eccCCccCCCCc--ccccCCCCEEECCCCCCCC--cchhhcccccchhccccCccCCCC--cccccccCCEeeccCcccC
Confidence 999999886543 5667899999999998864 245778899999999999988654 3778899999999999998
Q ss_pred cccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCccccc
Q 045861 347 GSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFE 426 (508)
Q Consensus 347 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~ 426 (508)
+.. .+..++.++.+++++|.+.+ ...+..+++++.|++++|++++.. .+..+++|++|++++|++++. + .+.
T Consensus 277 ~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~l-~-~l~ 348 (384)
T d2omza2 277 NIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSDV-S-SLA 348 (384)
T ss_dssp CCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCCC-G-GGG
T ss_pred CCC--cccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCCC-h-hHc
Confidence 543 36788999999999999985 334788999999999999998653 378899999999999999853 3 689
Q ss_pred CCCCCCEEeCCCCcceecCCCccccCCCCcccccCC
Q 045861 427 KLLYLEYLNLSFNRLKGEIPSGESFANFSDNSFMGN 462 (508)
Q Consensus 427 ~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~l~l~~n 462 (508)
++++|++|++++|++++ +++...+++|+.+++++|
T Consensus 349 ~l~~L~~L~l~~N~l~~-l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 349 NLTNINWLSAGHNQISD-LTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp GCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCCE
T ss_pred CCCCCCEEECCCCcCCC-ChhhccCCCCCEeeCCCC
Confidence 99999999999999984 555667889999999988
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.95 E-value=5.3e-27 Score=220.24 Aligned_cols=251 Identities=30% Similarity=0.446 Sum_probs=219.7
Q ss_pred CCCEEEccCccCcc--CCChhhhhcccccCeeEccC-CcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCc
Q 045861 189 NLKVIDLTGNQLHG--ILPSSMGNLSTSLEYIYMPY-CRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQG 265 (508)
Q Consensus 189 ~L~~L~l~~~~~~~--~~~~~~~~~~~~L~~L~l~~-~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~ 265 (508)
.++.|+++++.+.+ .+|..+..++ +|++|++++ |.+.+.+|..+.++++|++|++++|.+.+..+..+..+..|++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~-~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCc-cccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 57778888887776 3677787776 888998886 6788888989999999999999999998888888889999999
Q ss_pred EEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCC-CEEEcCCCcccccCCccccCccCCcEEEccCCc
Q 045861 266 LYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPL-RNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNS 344 (508)
Q Consensus 266 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L-~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~ 344 (508)
++++.|.+...+|..+..+++++.+++++|.+.+.+|..+..+..+ +.+++++|++++..+..+..+..+ .+++..+.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~ 208 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSE
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 9999999888889999999999999999999988888888888776 889999999998888777776544 79999999
Q ss_pred cccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCccc
Q 045861 345 LNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRS 424 (508)
Q Consensus 345 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~ 424 (508)
..+.+|..+..++.++.+++++|.+.+..+ .+..+++|+.|++++|++++.+|..+.++++|++|+|++|++++.+|+
T Consensus 209 ~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~- 286 (313)
T d1ogqa_ 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ- 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-
T ss_pred cccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-
Confidence 998899999999999999999999986554 578889999999999999999999999999999999999999988884
Q ss_pred ccCCCCCCEEeCCCCccee
Q 045861 425 FEKLLYLEYLNLSFNRLKG 443 (508)
Q Consensus 425 l~~l~~L~~L~l~~n~l~~ 443 (508)
+..+++|+.+++++|+..+
T Consensus 287 ~~~L~~L~~l~l~~N~~l~ 305 (313)
T d1ogqa_ 287 GGNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp STTGGGSCGGGTCSSSEEE
T ss_pred cccCCCCCHHHhCCCcccc
Confidence 5788999999999998543
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=2.9e-24 Score=200.66 Aligned_cols=245 Identities=23% Similarity=0.316 Sum_probs=156.5
Q ss_pred CCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeCc
Q 045861 22 RLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVLE 101 (508)
Q Consensus 22 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (508)
..+.++.++.+++ .+|..+ .+++++|+|++|+++.+.+.+|.++++|++|++++|.+....|.+|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCC--CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 5678888888888 567665 3689999999999987766788899999999999999887778889999999999998
Q ss_pred cccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCccc
Q 045861 102 NNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFL 181 (508)
Q Consensus 102 ~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 181 (508)
+|+++ .+|..+ ...++.|.+..|.+....+..+.....++.+....+........ .
T Consensus 88 ~n~l~-------------------~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~---~ 143 (305)
T d1xkua_ 88 KNQLK-------------------ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIE---N 143 (305)
T ss_dssp SSCCS-------------------BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBC---T
T ss_pred CCccC-------------------cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCC---c
Confidence 88876 333322 24667777777777655555566666777777766654332211 1
Q ss_pred ccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCC
Q 045861 182 SSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQ 261 (508)
Q Consensus 182 ~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~ 261 (508)
..+..+++|+.++++++.+... +.. ..++++.|++.++......+..+..++.++.|++++|.+.+..+.++.+++
T Consensus 144 ~~~~~l~~L~~l~l~~n~l~~l-~~~---~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~ 219 (305)
T d1xkua_ 144 GAFQGMKKLSYIRIADTNITTI-PQG---LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP 219 (305)
T ss_dssp TGGGGCTTCCEEECCSSCCCSC-CSS---CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGST
T ss_pred cccccccccCccccccCCcccc-Ccc---cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccc
Confidence 3466667777777777766532 211 122555555555555545555555555555555555555544445555555
Q ss_pred CCCcEEccCCcCccccchhhhCCCCCcEEEeeCceee
Q 045861 262 KLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLF 298 (508)
Q Consensus 262 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~ 298 (508)
+|++|++++|.++ .+|..+..+++|++|++++|+++
T Consensus 220 ~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 220 HLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp TCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred cceeeeccccccc-ccccccccccCCCEEECCCCccC
Confidence 5555555555554 33444445555555555555443
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=1.8e-23 Score=195.24 Aligned_cols=246 Identities=19% Similarity=0.245 Sum_probs=136.7
Q ss_pred CCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCccccCCCCCCcEEc
Q 045861 189 NLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYL 268 (508)
Q Consensus 189 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l 268 (508)
++++|++++|.++...+.+|..+. +|++|+++++.+....|..+..+++|++|++++|.++. +|.. ....+..|.+
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~-~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~-l~~~--~~~~l~~L~~ 107 (305)
T d1xkua_ 32 DTALLDLQNNKITEIKDGDFKNLK-NLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEK--MPKTLQELRV 107 (305)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCT-TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSS--CCTTCCEEEC
T ss_pred CCCEEECcCCcCCCcChhHhhccc-cccccccccccccccchhhhhCCCccCEecccCCccCc-Cccc--hhhhhhhhhc
Confidence 344444444444433333333333 44444444444444444455556666666666666553 2222 2345666666
Q ss_pred cCCcCccccchhhhCCCCCcEEEeeCcee--eeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccc
Q 045861 269 YKNKLEGSIPDSLCNLGRLVELQFYDNKL--FGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLN 346 (508)
Q Consensus 269 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~--~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~ 346 (508)
.+|.+.+..+..+.....+..+....+.. .......+..+++|+.+++++|.+...... .+++|++|++++|...
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~---~~~~L~~L~l~~n~~~ 184 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG---LPPSLTELHLDGNKIT 184 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSS---CCTTCSEEECTTSCCC
T ss_pred cccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcc---cCCccCEEECCCCcCC
Confidence 66666654444555555666666655532 122333455556666666666665543222 2356666666666666
Q ss_pred cccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccc-
Q 045861 347 GSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSF- 425 (508)
Q Consensus 347 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l- 425 (508)
...+..+..++.+++|++++|.+.+..+..+.++++|++|+|++|+++ .+|.++..+++|++|++++|+++......|
T Consensus 185 ~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~ 263 (305)
T d1xkua_ 185 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 263 (305)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred CCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhcc
Confidence 556666666666666666666666555566666666666666666666 455566666666666666666664433333
Q ss_pred -----cCCCCCCEEeCCCCcce
Q 045861 426 -----EKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 426 -----~~l~~L~~L~l~~n~l~ 442 (508)
...++|+.|++++|++.
T Consensus 264 ~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 264 PPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CSSCCTTSCCCSEEECCSSSSC
T ss_pred CcchhcccCCCCEEECCCCcCc
Confidence 23455666666666654
No 7
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.2e-24 Score=198.59 Aligned_cols=204 Identities=26% Similarity=0.247 Sum_probs=154.7
Q ss_pred CCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEE
Q 045861 260 LQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFN 339 (508)
Q Consensus 260 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ 339 (508)
...+.+++.+++.++ .+|..+. +++++|+|++|.+.+..+..|..+++|++|++++|.++... .+..+++|++|+
T Consensus 9 ~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~--~~~~l~~L~~L~ 83 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ--VDGTLPVLGTLD 83 (266)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE--CCSCCTTCCEEE
T ss_pred cCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccc--cccccccccccc
Confidence 344455566666665 3443332 35667777777666555566667777777777777766543 345677788888
Q ss_pred ccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccc
Q 045861 340 FSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSG 419 (508)
Q Consensus 340 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~ 419 (508)
+++|+++ ..+..+..++.|+.|++++|.+....+..+..+.++++|++++|.++...+..+..+++++.+++++|++++
T Consensus 84 Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccc
Confidence 8888777 445667788888888888888887777778888899999999999887777778888899999999999998
Q ss_pred cCcccccCCCCCCEEeCCCCcceecCCCc-cccCCCCcccccCCCCCCCCCC
Q 045861 420 FIPRSFEKLLYLEYLNLSFNRLKGEIPSG-ESFANFSDNSFMGNSFLCGSPN 470 (508)
Q Consensus 420 ~~~~~l~~l~~L~~L~l~~n~l~~~~p~~-~~~~~l~~l~l~~n~~~c~~~~ 470 (508)
..++.|..+++|++|++++|+++ .+|.. ....+|+.+++++|||.|+|..
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~CdC~~ 213 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred cCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCCCcch
Confidence 88888889999999999999988 77765 4567888999999999999964
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.1e-24 Score=201.02 Aligned_cols=206 Identities=23% Similarity=0.224 Sum_probs=107.5
Q ss_pred CCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeC-ceeeeeCCcccCCCCCCCEEEc
Q 045861 238 NLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYD-NKLFGSIPACIGKLSPLRNLLL 316 (508)
Q Consensus 238 ~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-n~~~~~~~~~~~~~~~L~~L~l 316 (508)
++++|++++|.++...+.+|.++++|++|++++|.+....+..+...+.+..+.... +.+....+..+..+++|++|++
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l 112 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEec
Confidence 455555555555544444555555555555555555544444455555555554432 2333333444555555555555
Q ss_pred CCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCccccc
Q 045861 317 HSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGS 396 (508)
Q Consensus 317 ~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 396 (508)
++|.+.......+....+|+.+++++|.+++..+..+..++.|+.|++++|++....+.+|.++++|+++++++|++++.
T Consensus 113 ~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i 192 (284)
T d1ozna_ 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (284)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhcccccc
Confidence 55555544444455555555555555555544444455555555555555555544444455555555555555555544
Q ss_pred CcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCccee
Q 045861 397 IPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKG 443 (508)
Q Consensus 397 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 443 (508)
.|..|..+++|+.|++++|++.+..+..|..+++|++|++++|++.+
T Consensus 193 ~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred ChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 45555555555555555555555444555555555555555555543
No 9
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=9e-25 Score=201.72 Aligned_cols=226 Identities=22% Similarity=0.214 Sum_probs=153.4
Q ss_pred EEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcC-CCc
Q 045861 242 MSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLH-SNV 320 (508)
Q Consensus 242 L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~-~n~ 320 (508)
++.++..++ .+|..+. +.+++|+|++|.++...+..|.++++|++|++++|.+....+..+...+.++.+.+. .+.
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 344444444 3343332 456777777777765555567777777777777777766666666667777777654 445
Q ss_pred ccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCccc
Q 045861 321 LTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPES 400 (508)
Q Consensus 321 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 400 (508)
+....+..|..+++|++|++++|.+....+..+....+|+.+++++|.+++..+..|..+++|+.|++++|.++...+.+
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~ 172 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA 172 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred cccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhh
Confidence 55555666777777777777777776555666666777777777777777655666777777777777777777666677
Q ss_pred ccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCc-cccCCCCcccccCCCCCCCCCC
Q 045861 401 LGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSG-ESFANFSDNSFMGNSFLCGSPN 470 (508)
Q Consensus 401 ~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~-~~~~~l~~l~l~~n~~~c~~~~ 470 (508)
|.++++|+.+++++|++++..|..|.++++|++|++++|++.+..|.. ....+|+.+++++|||.|+|+.
T Consensus 173 f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~ 243 (284)
T d1ozna_ 173 FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred hccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCccc
Confidence 777777777777777777777777777777777777777776433332 3456677777777777777764
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=9e-22 Score=179.32 Aligned_cols=203 Identities=25% Similarity=0.210 Sum_probs=163.1
Q ss_pred cCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEE
Q 045861 235 NLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNL 314 (508)
Q Consensus 235 ~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L 314 (508)
....+..++.+++.++ .+|..+. +++++|++++|.+.+..+..|..+++|++|++++|.++.. + .+..+++|++|
T Consensus 8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L 82 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTL 82 (266)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEE
T ss_pred ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-ccccccccccc
Confidence 3445566677777777 3554443 5688888888888766667788888888888888887643 2 34678889999
Q ss_pred EcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCccc
Q 045861 315 LLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQ 394 (508)
Q Consensus 315 ~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 394 (508)
++++|++... +..+..+++|++|++++|.+.+..+..+..+.++++|++++|.+....+..+..+++++.+++++|+++
T Consensus 83 ~Ls~N~l~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~ 161 (266)
T d1p9ag_ 83 DLSHNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (266)
T ss_dssp ECCSSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred cccccccccc-ccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccc
Confidence 9998888754 556778888999999999888777778888899999999999998777777888999999999999999
Q ss_pred ccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceec
Q 045861 395 GSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGE 444 (508)
Q Consensus 395 ~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~ 444 (508)
+..++.|..+++|++|+|++|+++ .+|+.+..+++|+.|++++|++.+.
T Consensus 162 ~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (266)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCCC
Confidence 777788888999999999999998 6777777889999999999998754
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.82 E-value=3.2e-17 Score=155.54 Aligned_cols=137 Identities=29% Similarity=0.387 Sum_probs=68.3
Q ss_pred CCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeCc
Q 045861 22 RLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVLE 101 (508)
Q Consensus 22 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 101 (508)
++++|+++++.++ .+|+. .++|++|++++|+++ .+|+. ..+|++|++++|++. .+++. .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 4666666666665 44532 356666666666666 33433 245666666666554 22210 0234444444
Q ss_pred cccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCcCCCCCCccc
Q 045861 102 NNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLTSSTSELSFL 181 (508)
Q Consensus 102 ~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 181 (508)
+|.+. .+|. +..+++|++++++++.+... +. ....+..+.+..+.....
T Consensus 107 ~n~l~-------------------~lp~-~~~l~~L~~L~l~~~~~~~~-~~---~~~~l~~l~~~~~~~~~~------- 155 (353)
T d1jl5a_ 107 NNQLE-------------------KLPE-LQNSSFLKIIDVDNNSLKKL-PD---LPPSLEFIAAGNNQLEEL------- 155 (353)
T ss_dssp SSCCS-------------------SCCC-CTTCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSSC-------
T ss_pred ccccc-------------------cccc-hhhhccceeecccccccccc-cc---ccccccchhhcccccccc-------
Confidence 44333 3332 45566777777766665422 21 234455555544433221
Q ss_pred ccccCCCCCCEEEccCccCc
Q 045861 182 SSLRNCRNLKVIDLTGNQLH 201 (508)
Q Consensus 182 ~~l~~~~~L~~L~l~~~~~~ 201 (508)
..+..++.++.+.+.++...
T Consensus 156 ~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 156 PELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp CCCTTCTTCCEEECCSSCCS
T ss_pred ccccccccceeccccccccc
Confidence 22344455556666555443
No 12
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=7e-22 Score=195.33 Aligned_cols=354 Identities=20% Similarity=0.201 Sum_probs=161.9
Q ss_pred CCcEEecCCCcCCCC-CCcCCcCCCCCcEEEcccCCCCCC----CCcccCCCCCCCeEEccCCccccCCchh----cc-C
Q 045861 22 RLQALDINNNHVTGP-VPRNLWQCQELIAISLSHNQLTGL----IPRDIGNLTSARALLLGNNNLIGEIPHE----IG-N 91 (508)
Q Consensus 22 ~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~----~~-~ 91 (508)
+|++||++++.+++. +.+.+..++++++|+|++|.++.. ++..+..+++|++|+|++|++....... +. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 466677776666532 122244456666677766666521 2233455666666666666554211111 11 1
Q ss_pred CCCCCEeeCccccCCCCCCCCCCEEEccCCccccc----CCccccCCCCCcEEEccCcccccccChhhc-----CCCCCC
Q 045861 92 LHNLEYLVLENNNFDGPRHSNLERLYLERNNFSGT----IPSFIFNASKLSILGIRTNSFSGTIPSTIA-----NLRNLQ 162 (508)
Q Consensus 92 l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~-----~l~~L~ 162 (508)
..+|++|++++ |++++. ++..+..+++|++|++++|.+.......+. ......
T Consensus 83 ~~~L~~L~L~~------------------n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~ 144 (460)
T d1z7xw1 83 SCKIQKLSLQN------------------CCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLE 144 (460)
T ss_dssp TCCCCEEECTT------------------SCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCC
T ss_pred CCCCCEEECCC------------------CCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccc
Confidence 12344444444 444322 334566777888888888877643222221 122233
Q ss_pred EEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCC----ChhhhhcccccCeeEccCCcCccc----CChhhh
Q 045861 163 WLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGIL----PSSMGNLSTSLEYIYMPYCRRSGR----IPEEIG 234 (508)
Q Consensus 163 ~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~~----~~~~l~ 234 (508)
............. .......+.....++.+.++++...... ...+.........+.+..+..... ....+.
T Consensus 145 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 223 (460)
T d1z7xw1 145 KLQLEYCSLSAAS-CEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVA 223 (460)
T ss_dssp EEECTTSCCBGGG-HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHH
T ss_pred cccccccccchhh-hcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhccccccc
Confidence 4443333222110 0111123445566777777766544221 111222222445555555443321 112234
Q ss_pred cCCCCcEEEcccCcccc-----ccCccccCCCCCCcEEccCCcCccc----cchhhhCCCCCcEEEeeCceeeeeCCcc-
Q 045861 235 NLINLITMSLGINKLTG-----SIPISLGKLQKLQGLYLYKNKLEGS----IPDSLCNLGRLVELQFYDNKLFGSIPAC- 304 (508)
Q Consensus 235 ~l~~L~~L~l~~~~~~~-----~~~~~l~~~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~~~~~~~~~- 304 (508)
..+.++.+++.++.+.. ...........++.+++++|.+... ....+...+.++.+++++|.+.......
T Consensus 224 ~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l 303 (460)
T d1z7xw1 224 SKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLL 303 (460)
T ss_dssp HCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHH
T ss_pred ccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 45666667766665431 1122233455666666666665422 1122344556666666666553211111
Q ss_pred ----cCCCCCCCEEEcCCCcccccCCcc----ccCccCCcEEEccCCccccc----cCcccc-CCCCCcEEECCCCcCCC
Q 045861 305 ----IGKLSPLRNLLLHSNVLTYVIPST----FLSLRDILVFNFSSNSLNGS----LPLDIG-NLKVVVGIDLSRNNLSD 371 (508)
Q Consensus 305 ----~~~~~~L~~L~l~~n~~~~~~~~~----~~~~~~L~~L~L~~n~l~~~----~~~~~~-~l~~L~~L~l~~n~l~~ 371 (508)
....+.|+.+++++|.+....... +...++|++|+|++|.++.. ++..+. ..+.|++|++++|.+++
T Consensus 304 ~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~ 383 (460)
T d1z7xw1 304 CETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 383 (460)
T ss_dssp HHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred hccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCCh
Confidence 112345566666655554332211 12233455555555554321 111111 23345555555555543
Q ss_pred c----cchhhhcCCCCCEEECcCCccc
Q 045861 372 S----IPTVIGGLSNLAFFSLAYNKLQ 394 (508)
Q Consensus 372 ~----~~~~~~~l~~L~~L~L~~n~l~ 394 (508)
. +++.+..+++|++|++++|.++
T Consensus 384 ~~~~~l~~~l~~~~~L~~L~Ls~N~i~ 410 (460)
T d1z7xw1 384 SSCSSLAATLLANHSLRELDLSNNCLG 410 (460)
T ss_dssp HHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 2 1222334455555555555544
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.81 E-value=3.4e-17 Score=155.37 Aligned_cols=307 Identities=22% Similarity=0.221 Sum_probs=176.4
Q ss_pred CeecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCc
Q 045861 1 MDFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNN 80 (508)
Q Consensus 1 l~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 80 (508)
|||++++++ ++|+ ..++|++|++++|.++ .+|+. ..+|+.|++++|+++.. ++ + .+.|++|++++|.
T Consensus 43 LdLs~~~L~-~lp~----~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~l-~~-l--p~~L~~L~L~~n~ 109 (353)
T d1jl5a_ 43 LELNNLGLS-SLPE----LPPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKAL-SD-L--PPLLEYLGVSNNQ 109 (353)
T ss_dssp EECTTSCCS-CCCS----CCTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCC-CS-C--CTTCCEEECCSSC
T ss_pred EEeCCCCCC-CCCC----CCCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccchh-hh-h--ccccccccccccc
Confidence 689999998 7884 4689999999999998 66764 46899999999998843 22 1 2469999999999
Q ss_pred cccCCchhccCCCCCCEeeCccccCCCC--CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCC
Q 045861 81 LIGEIPHEIGNLHNLEYLVLENNNFDGP--RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANL 158 (508)
Q Consensus 81 l~~~~~~~~~~l~~L~~L~L~~n~~~~~--~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l 158 (508)
+. .+|. ++.+++|++|+++++.+... ....+..+.+..+... ....+..++.++.+.+..+.+.. .+. ..
T Consensus 110 l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~-~~~---~~ 181 (353)
T d1jl5a_ 110 LE-KLPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKK-LPD---LP 181 (353)
T ss_dssp CS-SCCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSS-CCC---CC
T ss_pred cc-cccc-hhhhccceeeccccccccccccccccccchhhcccccc--ccccccccccceecccccccccc-ccc---cc
Confidence 88 5553 68899999999999987754 3455666666555443 23445556666677766665542 111 11
Q ss_pred CCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCC
Q 045861 159 RNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLIN 238 (508)
Q Consensus 159 ~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~ 238 (508)
...+.+......+... ..+..++.|+.++++++..... +. ...+
T Consensus 182 ~~~~~l~~~~~~~~~~-------~~~~~l~~L~~l~l~~n~~~~~-~~----------------------------~~~~ 225 (353)
T d1jl5a_ 182 LSLESIVAGNNILEEL-------PELQNLPFLTTIYADNNLLKTL-PD----------------------------LPPS 225 (353)
T ss_dssp TTCCEEECCSSCCSSC-------CCCTTCTTCCEEECCSSCCSSC-CS----------------------------CCTT
T ss_pred cccccccccccccccc-------cccccccccccccccccccccc-cc----------------------------cccc
Confidence 2334444444333322 2234455666666666544321 11 1223
Q ss_pred CcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCC-CCCcEEEeeCceeeeeCCcccCCCCCCCEEEcC
Q 045861 239 LITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNL-GRLVELQFYDNKLFGSIPACIGKLSPLRNLLLH 317 (508)
Q Consensus 239 L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~ 317 (508)
+..+.+..+.+... + ...+.+...++..+.+.+. ..+ ......++..+.+.+. ...+++|++|+++
T Consensus 226 l~~~~~~~~~~~~~-~---~~~~~l~~~~~~~~~~~~l-----~~l~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls 292 (353)
T d1jl5a_ 226 LEALNVRDNYLTDL-P---ELPQSLTFLDVSENIFSGL-----SELPPNLYYLNASSNEIRSL----CDLPPSLEELNVS 292 (353)
T ss_dssp CCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSEE-----SCCCTTCCEEECCSSCCSEE----CCCCTTCCEEECC
T ss_pred cccccccccccccc-c---ccccccccccccccccccc-----ccccchhcccccccCccccc----cccCCCCCEEECC
Confidence 33344443333211 1 1122333333333332210 011 1233344444433221 2234566777777
Q ss_pred CCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECc
Q 045861 318 SNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLA 389 (508)
Q Consensus 318 ~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 389 (508)
+|.+..+. . .+++|+.|++++|+++ .+|. .+++|++|++++|+++ .+|+. ..+|+.|.+.
T Consensus 293 ~N~l~~lp-~---~~~~L~~L~L~~N~L~-~l~~---~~~~L~~L~L~~N~L~-~lp~~---~~~L~~L~~~ 352 (353)
T d1jl5a_ 293 NNKLIELP-A---LPPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLR-EFPDI---PESVEDLRMN 352 (353)
T ss_dssp SSCCSCCC-C---CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECC
T ss_pred CCccCccc-c---ccCCCCEEECCCCcCC-cccc---ccCCCCEEECcCCcCC-CCCcc---ccccCeeECc
Confidence 77666432 1 2456777777777776 3443 2456777788888776 44542 3456666654
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=5.7e-21 Score=188.68 Aligned_cols=381 Identities=19% Similarity=0.137 Sum_probs=189.2
Q ss_pred CCcEEEcccCCCCCCC-CcccCCCCCCCeEEccCCcccc----CCchhccCCCCCCEeeCccccCCCCCCCCCCEEEccC
Q 045861 46 ELIAISLSHNQLTGLI-PRDIGNLTSARALLLGNNNLIG----EIPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLER 120 (508)
Q Consensus 46 ~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~ 120 (508)
+|+.||++++++++.. .+.+..++++|.|+|++|.++. .+..++..+++|++|+|++|.++..+
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~----------- 71 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVG----------- 71 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHH-----------
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHH-----------
Confidence 5677888888776532 2334567777888888877663 22344566777777777776553100
Q ss_pred CcccccCCcccc-CCCCCcEEEccCcccccc----cChhhcCCCCCCEEeCCCCcCcCCCCCCcccccc-cCCCCCCEEE
Q 045861 121 NNFSGTIPSFIF-NASKLSILGIRTNSFSGT----IPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSL-RNCRNLKVID 194 (508)
Q Consensus 121 ~~~~~~~~~~~~-~l~~L~~L~l~~~~i~~~----~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l-~~~~~L~~L~ 194 (508)
+. .+...+. ...+|++|++++|.++.. ++.++..+++|++|++++|.+...+.. .....+ ..........
T Consensus 72 --~~-~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~-~l~~~l~~~~~~~~~~~ 147 (460)
T d1z7xw1 72 --VH-CVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQ-LLCEGLLDPQCRLEKLQ 147 (460)
T ss_dssp --HH-HHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHH-HHHHHHTSTTCCCCEEE
T ss_pred --HH-HHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhh-hhhhccccccccccccc
Confidence 00 1122222 234789999999888643 345566788899999988876542110 000111 1122233444
Q ss_pred ccCccCccCCC----hhhhhcccccCeeEccCCcCcccC----Chhh-hcCCCCcEEEcccCccccc----cCccccCCC
Q 045861 195 LTGNQLHGILP----SSMGNLSTSLEYIYMPYCRRSGRI----PEEI-GNLINLITMSLGINKLTGS----IPISLGKLQ 261 (508)
Q Consensus 195 l~~~~~~~~~~----~~~~~~~~~L~~L~l~~~~~~~~~----~~~l-~~l~~L~~L~l~~~~~~~~----~~~~l~~~~ 261 (508)
........... ..+... ..++.+.++++...... ...+ ........+++..+.+... ....+...+
T Consensus 148 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 226 (460)
T d1z7xw1 148 LEYCSLSAASCEPLASVLRAK-PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKA 226 (460)
T ss_dssp CTTSCCBGGGHHHHHHHHHHC-TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCT
T ss_pred ccccccchhhhcccccccccc-cccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence 43333221111 111111 25566666655433210 0111 1223445566655544321 112233456
Q ss_pred CCCcEEccCCcCccc-----cchhhhCCCCCcEEEeeCceeeee----CCcccCCCCCCCEEEcCCCcccccCCcc----
Q 045861 262 KLQGLYLYKNKLEGS-----IPDSLCNLGRLVELQFYDNKLFGS----IPACIGKLSPLRNLLLHSNVLTYVIPST---- 328 (508)
Q Consensus 262 ~L~~L~l~~n~l~~~-----~~~~~~~l~~L~~L~L~~n~~~~~----~~~~~~~~~~L~~L~l~~n~~~~~~~~~---- 328 (508)
.++.+.+.++.+... .........+++.+++++|.+... ....+...+.++.+++++|.+.......
T Consensus 227 ~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~ 306 (460)
T d1z7xw1 227 SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET 306 (460)
T ss_dssp TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH
T ss_pred cccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcc
Confidence 666666666654321 122233455666666666655322 1122334566666666666654321111
Q ss_pred -ccCccCCcEEEccCCccccccCc----cccCCCCCcEEECCCCcCCCccc----hhhh-cCCCCCEEECcCCccccc--
Q 045861 329 -FLSLRDILVFNFSSNSLNGSLPL----DIGNLKVVVGIDLSRNNLSDSIP----TVIG-GLSNLAFFSLAYNKLQGS-- 396 (508)
Q Consensus 329 -~~~~~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~l~~n~l~~~~~----~~~~-~l~~L~~L~L~~n~l~~~-- 396 (508)
......|+.+++++|.++..... .+...++|++|++++|++.+... ..+. ..+.|++|++++|.+++.
T Consensus 307 l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~ 386 (460)
T d1z7xw1 307 LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSC 386 (460)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHH
T ss_pred ccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHH
Confidence 12234566666666665533211 22334456666666666653221 2222 344566666666666532
Q ss_pred --CcccccCCCCCCEEECCCCcccccCccc----cc-CCCCCCEEeCCCCcce
Q 045861 397 --IPESLGDLRSLEFLDLSNNSFSGFIPRS----FE-KLLYLEYLNLSFNRLK 442 (508)
Q Consensus 397 --~~~~~~~l~~L~~L~L~~n~~~~~~~~~----l~-~l~~L~~L~l~~n~l~ 442 (508)
++..+..+++|++|+|++|+++...... +. ....|+.|++.+|.+.
T Consensus 387 ~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 387 SSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp HHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 2233444566666666666665422222 21 2234666666666654
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1.6e-17 Score=147.05 Aligned_cols=189 Identities=24% Similarity=0.287 Sum_probs=110.3
Q ss_pred hhcCCCCcEEEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCC
Q 045861 233 IGNLINLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLR 312 (508)
Q Consensus 233 l~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~ 312 (508)
+..+.+|+.|++.+|.++.. ..+..+++|++|++++|.+.+.. .+..+++++++++++|.++. + ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~~-i-~~l~~l~~L~ 110 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLKN-V-SAIAGLQSIK 110 (227)
T ss_dssp HHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCSC-C-GGGTTCTTCC
T ss_pred HHHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeeccc--cccccccccccccccccccc-c-cccccccccc
Confidence 34455666666666666532 24566666666666666665332 25666666666666665542 2 2355666666
Q ss_pred EEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCc
Q 045861 313 NLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNK 392 (508)
Q Consensus 313 ~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 392 (508)
.++++++..... ..+...+.+..+.++++.+.... .+...++|+.|++++|.+.+.. .++++++|++|++++|+
T Consensus 111 ~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~ 184 (227)
T d1h6ua2 111 TLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNK 184 (227)
T ss_dssp EEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSC
T ss_pred cccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccccch--hhcccccceecccCCCc
Confidence 666666655433 22445556666666666654222 2455566666666666665322 25566666777776666
Q ss_pred ccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCC
Q 045861 393 LQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLS 437 (508)
Q Consensus 393 l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~ 437 (508)
+++ ++ .+.++++|++|++++|++++.. .+.++++|++|+++
T Consensus 185 l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 185 ISD-IS-PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLT 225 (227)
T ss_dssp CCC-CG-GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEE
T ss_pred cCC-Ch-hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEee
Confidence 653 22 2566666777777776666443 25666666666664
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=2e-17 Score=146.39 Aligned_cols=202 Identities=19% Similarity=0.312 Sum_probs=163.4
Q ss_pred EEcccCccccccCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcc
Q 045861 242 MSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVL 321 (508)
Q Consensus 242 L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~ 321 (508)
++++.+.+++. ..+..+.+|++|++.+|.+.+ + ..+..+++|++|++++|.+++.. .+..+++++.+++++|.+
T Consensus 24 ~~l~~~~~~d~--~~~~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~ 97 (227)
T d1h6ua2 24 IAAGKSNVTDT--VTQADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPL 97 (227)
T ss_dssp HHTTCSSTTSE--ECHHHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCCc--CCHHHcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeeccc--cccccccccccccccccc
Confidence 44555555533 245667899999999999984 4 46889999999999999986543 388899999999999988
Q ss_pred cccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccc
Q 045861 322 TYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESL 401 (508)
Q Consensus 322 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 401 (508)
+.. ..+..+++|++++++++..... ..+...+.+..+.++++.+.... .+..+++|++|++++|.+++. ..+
T Consensus 98 ~~i--~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~--~~l 169 (227)
T d1h6ua2 98 KNV--SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDL--TPL 169 (227)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCC--GGG
T ss_pred ccc--cccccccccccccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccccc--hhh
Confidence 754 3578899999999999987643 34567889999999999987433 367889999999999999743 348
Q ss_pred cCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCccccCCCCccccc
Q 045861 402 GDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSGESFANFSDNSFM 460 (508)
Q Consensus 402 ~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~l~l~ 460 (508)
.++++|+.|++++|++++.. .+.++++|++|++++|+++ .+|....+.+|+.++++
T Consensus 170 ~~l~~L~~L~Ls~n~l~~l~--~l~~l~~L~~L~Ls~N~lt-~i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 170 ANLSKLTTLKADDNKISDIS--PLASLPNLIEVHLKNNQIS-DVSPLANTSNLFIVTLT 225 (227)
T ss_dssp TTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECTTSCCC-BCGGGTTCTTCCEEEEE
T ss_pred cccccceecccCCCccCCCh--hhcCCCCCCEEECcCCcCC-CCcccccCCCCCEEEee
Confidence 89999999999999998643 4889999999999999998 56665677788887775
No 17
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.73 E-value=6e-18 Score=145.45 Aligned_cols=176 Identities=22% Similarity=0.273 Sum_probs=111.5
Q ss_pred EEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccc-cCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCC
Q 045861 289 ELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTY-VIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRN 367 (508)
Q Consensus 289 ~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 367 (508)
.++.+++.++ .+|..+ .+++++|++++|.++. .....|..+++|++|++++|.+....+..+..++.|++|++++|
T Consensus 12 ~v~Cs~~~L~-~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcC-ccCCCC--CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 4455555443 333332 2466666777766654 33455666777777777777777666667777777777777777
Q ss_pred cCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCC
Q 045861 368 NLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPS 447 (508)
Q Consensus 368 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~ 447 (508)
++....+.+|.++++|++|+|++|.++...+++|..+++|++|+|++|.+.......+ -...++.+.+..+.+.+..|.
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~p~ 167 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSST
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH-HhhhhhhhcccCCCeEeCCCh
Confidence 7776666677777777777777777776666777777777788887777764322111 012245556666776655554
Q ss_pred ccccCCCCcccccCCCCCCCCCC
Q 045861 448 GESFANFSDNSFMGNSFLCGSPN 470 (508)
Q Consensus 448 ~~~~~~l~~l~l~~n~~~c~~~~ 470 (508)
.+..+...++..|.+.|.++.
T Consensus 168 --~l~~~~l~~L~~n~l~C~~~~ 188 (192)
T d1w8aa_ 168 --KVRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp --TTTTSBGGGSCTTTCCCCCC-
T ss_pred --hhcCCEeeecCHhhCcCCCCC
Confidence 345556667777777777653
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.8e-17 Score=148.48 Aligned_cols=198 Identities=18% Similarity=0.166 Sum_probs=99.3
Q ss_pred CCcEEEcccCccccccCccccCCCCCCcEEccCCcCcccc-chhhhCCCCCcEEEeeC-ceeeeeCCcccCCCCCCCEEE
Q 045861 238 NLITMSLGINKLTGSIPISLGKLQKLQGLYLYKNKLEGSI-PDSLCNLGRLVELQFYD-NKLFGSIPACIGKLSPLRNLL 315 (508)
Q Consensus 238 ~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~-n~~~~~~~~~~~~~~~L~~L~ 315 (508)
++++|++++|.++...+.+|.++++|++|++++|.+.+.+ +..|..+++++++.+.. +.+....+..+..+++|++++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 4555555555555433344555555555555555544322 23455555555555543 344444455555556666666
Q ss_pred cCCCcccccCCc-cccCccCCcEEEccCCccccccCccccCCC-CCcEEECCCCcCCCccchhhhcCCCCCEE-ECcCCc
Q 045861 316 LHSNVLTYVIPS-TFLSLRDILVFNFSSNSLNGSLPLDIGNLK-VVVGIDLSRNNLSDSIPTVIGGLSNLAFF-SLAYNK 392 (508)
Q Consensus 316 l~~n~~~~~~~~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L-~L~~n~ 392 (508)
+++|.+....+. .+..+..+..+...++.+....+..+..++ .++.+++++|++....+..+. .+++.++ .+++|.
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNN 188 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTT
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccc-chhhhccccccccc
Confidence 666555433221 122334444444455555544444444432 455566666666533333333 2333333 445555
Q ss_pred ccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeC
Q 045861 393 LQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNL 436 (508)
Q Consensus 393 l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l 436 (508)
++...+..|.++++|++|++++|+++...+..|.+++.|+.+++
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred cccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 65333445666666666666666666554455555555554443
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2.5e-17 Score=147.49 Aligned_cols=103 Identities=20% Similarity=0.256 Sum_probs=81.9
Q ss_pred eecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCC-CCCcccCCCCCCCeEEccC-C
Q 045861 2 DFANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTG-LIPRDIGNLTSARALLLGN-N 79 (508)
Q Consensus 2 ~l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~-n 79 (508)
++++++++ ++|.++ .+++++|++++|.++...+.+|.++++|++|++++|.+.. ..+.+|.+++.++++.+.. +
T Consensus 14 ~c~~~~l~-~iP~~l---~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 14 LCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp EEESCSCS-SCCSCS---CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred EEeCCCCC-CcCCCC---CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 56777888 888776 3578999999999986556678899999999999998765 3456788899999998764 5
Q ss_pred ccccCCchhccCCCCCCEeeCccccCCCC
Q 045861 80 NLIGEIPHEIGNLHNLEYLVLENNNFDGP 108 (508)
Q Consensus 80 ~l~~~~~~~~~~l~~L~~L~L~~n~~~~~ 108 (508)
.+....+..|.++++|+++++++|.+...
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~l~~~ 118 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTGIKHL 118 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCCCCSC
T ss_pred cccccccccccccccccccccchhhhccc
Confidence 67666777889999999999998887643
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=9.7e-17 Score=139.82 Aligned_cols=157 Identities=24% Similarity=0.373 Sum_probs=91.8
Q ss_pred ecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccc
Q 045861 3 FANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLI 82 (508)
Q Consensus 3 l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 82 (508)
++.+.+++.++..- +.+|+.|+++++.+... + .+..+++|++|++++|++++. ..++.+++|++|++++|++.
T Consensus 31 l~~~~~~~~~~~~~---L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l--~~~~~l~~L~~L~l~~n~i~ 103 (210)
T d1h6ta2 31 LKKKSVTDAVTQNE---LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDI--KPLANLKNLGWLFLDENKVK 103 (210)
T ss_dssp TTCSCTTSEECHHH---HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred hCcCccCCccCHHH---hcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCc--cccccCcccccccccccccc
Confidence 34455555554322 45777888888877643 2 367788888888888887754 24677788888888888776
Q ss_pred cCCchhccCCCCCCEeeCccccCCCC----CCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCC
Q 045861 83 GEIPHEIGNLHNLEYLVLENNNFDGP----RHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANL 158 (508)
Q Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~~~~~----~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l 158 (508)
.++ .+.++++|+.|++++|.+... .++.++.+++++|.+++ +..+..+++|+++++++|++++. + .++.+
T Consensus 104 -~l~-~l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l 177 (210)
T d1h6ta2 104 -DLS-SLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-PLAGL 177 (210)
T ss_dssp -CGG-GGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-GGTTC
T ss_pred -ccc-cccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc-c-cccCC
Confidence 333 577778888888877766533 33444555555444431 22334444455555555544421 1 14444
Q ss_pred CCCCEEeCCCCcCc
Q 045861 159 RNLQWLDLSFNYLT 172 (508)
Q Consensus 159 ~~L~~L~l~~n~~~ 172 (508)
++|++|++++|.++
T Consensus 178 ~~L~~L~Ls~N~i~ 191 (210)
T d1h6ta2 178 TKLQNLYLSKNHIS 191 (210)
T ss_dssp TTCCEEECCSSCCC
T ss_pred CCCCEEECCCCCCC
Confidence 45555555544443
No 21
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=1.1e-17 Score=143.68 Aligned_cols=156 Identities=24% Similarity=0.259 Sum_probs=120.8
Q ss_pred CCEEEcCCCcccccCCccccCccCCcEEEccCCcccc-ccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECc
Q 045861 311 LRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNG-SLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLA 389 (508)
Q Consensus 311 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 389 (508)
.+.++.+++.++.++... .+++++|+|++|++++ ..+..|..+++|+.|++++|.+....+..|..+++|++|+++
T Consensus 10 ~~~v~Cs~~~L~~iP~~l---p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDI---PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCSSCCSCC---CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcCccCCCC---CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 357888888888654432 2678889999998875 345667888889999999998888778888888899999999
Q ss_pred CCcccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCCCCcceecCCCccccCCCCcccccCCCCCCCCC
Q 045861 390 YNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKGEIPSGESFANFSDNSFMGNSFLCGSP 469 (508)
Q Consensus 390 ~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~l~l~~n~~~c~~~ 469 (508)
+|+++...+.+|.++++|++|+|++|++++..+++|..+++|++|++++|++.+..+.......++...+..+...|.-|
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~~~~c~~p 166 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhcccCCCeEeCCC
Confidence 99888777788888889999999999998888888888888999999998887544433333445566667776677655
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=1.9e-16 Score=136.68 Aligned_cols=162 Identities=27% Similarity=0.403 Sum_probs=101.8
Q ss_pred ecCCCCCCCCchhhhhCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccc
Q 045861 3 FANNTLTGSLPDDMCQHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLI 82 (508)
Q Consensus 3 l~~n~l~~~l~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 82 (508)
++.+.+++.++. +.++++++|+++++.+.. + +.+..+++|++|++++|++++.. .++++++|++|++++|.+.
T Consensus 25 l~~~~~~~~~~~---~~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~ 97 (199)
T d2omxa2 25 LGKTNVTDTVSQ---TDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIA 97 (199)
T ss_dssp TTCSSTTSEECH---HHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred hCCCCCCCccCH---HHhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCcc--cccCCcccccccccccccc
Confidence 445566644432 235678888888888773 3 34677888888888888887542 3778888888888888765
Q ss_pred cCCchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccChhhcCCCCCC
Q 045861 83 GEIPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQ 162 (508)
Q Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~ 162 (508)
.++ .+.++++|+.|+++++.+... ..+..+++|+.+++++|++.. + +.+..+++|+
T Consensus 98 -~~~-~l~~l~~L~~L~l~~~~~~~~--------------------~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~ 153 (199)
T d2omxa2 98 -DIT-PLANLTNLTGLTLFNNQITDI--------------------DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQ 153 (199)
T ss_dssp -CCG-GGTTCTTCSEEECCSSCCCCC--------------------GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred -ccc-ccccccccccccccccccccc--------------------cccchhhhhHHhhhhhhhhcc-c-cccccccccc
Confidence 333 477778888888777765432 234555666666666665542 2 2355566666
Q ss_pred EEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCcc
Q 045861 163 WLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHG 202 (508)
Q Consensus 163 ~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 202 (508)
.|++.+|.+..+ ..+.++++|+.|++++|.+++
T Consensus 154 ~L~l~~n~l~~l-------~~l~~l~~L~~L~ls~N~i~~ 186 (199)
T d2omxa2 154 QLNFSSNQVTDL-------KPLANLTTLERLDISSNKVSD 186 (199)
T ss_dssp EEECCSSCCCCC-------GGGTTCTTCCEEECCSSCCCC
T ss_pred ccccccccccCC-------ccccCCCCCCEEECCCCCCCC
Confidence 666666655432 234555666666666666553
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.2e-16 Score=139.15 Aligned_cols=166 Identities=22% Similarity=0.298 Sum_probs=121.8
Q ss_pred CCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEE
Q 045861 259 KLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVF 338 (508)
Q Consensus 259 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 338 (508)
.+.+|++|++++|.+... ..+..+++|++|++++|++++.. .+..+++|++|++++|+++... .+..+++|+.+
T Consensus 44 ~L~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L 117 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKDLS--SLKDLKKLKSL 117 (210)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCGG--GGTTCTTCCEE
T ss_pred HhcCccEEECcCCCCCCc--hhHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccccc--ccccccccccc
Confidence 456788888888888743 24677888888888888876432 3567888888888888887543 46777888888
Q ss_pred EccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCccc
Q 045861 339 NFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFS 418 (508)
Q Consensus 339 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~ 418 (508)
++++|.+.. + ..+..++.++.+++++|.+.+ +..+..+++|+.+++++|.+++. + .+.++++|++|++++|+++
T Consensus 118 ~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~ 191 (210)
T d1h6ta2 118 SLEHNGISD-I-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHIS 191 (210)
T ss_dssp ECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred ccccccccc-c-ccccccccccccccccccccc--ccccccccccccccccccccccc-c-cccCCCCCCEEECCCCCCC
Confidence 888887763 2 346677788888888888774 23466778888888888888743 3 3677888888888888887
Q ss_pred ccCcccccCCCCCCEEeCCC
Q 045861 419 GFIPRSFEKLLYLEYLNLSF 438 (508)
Q Consensus 419 ~~~~~~l~~l~~L~~L~l~~ 438 (508)
+. + .+.++++|++|++++
T Consensus 192 ~l-~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 DL-R-ALAGLKNLDVLELFS 209 (210)
T ss_dssp BC-G-GGTTCTTCSEEEEEE
T ss_pred CC-h-hhcCCCCCCEEEccC
Confidence 43 3 577788888887753
No 24
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.9e-16 Score=136.66 Aligned_cols=163 Identities=26% Similarity=0.420 Sum_probs=96.0
Q ss_pred cCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcE
Q 045861 258 GKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILV 337 (508)
Q Consensus 258 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 337 (508)
..++++++|+++++.+.. + ..+..+++|++|++++|++++..+ +..+++|++|++++|.+.... .+..++.|++
T Consensus 37 ~~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~ 110 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--PLANLTNLTG 110 (199)
T ss_dssp HHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSE
T ss_pred HHhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccccccccccc--cccccccccc
Confidence 345677777777777663 2 345666777777777776653322 566677777777776665432 2556666666
Q ss_pred EEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcc
Q 045861 338 FNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSF 417 (508)
Q Consensus 338 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~ 417 (508)
+++++|..... ..+..+++|+.|++++|++.. + ..+..+++|++|++++|.+++. ..+.++++|++|++++|++
T Consensus 111 L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i 184 (199)
T d2omxa2 111 LTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKV 184 (199)
T ss_dssp EECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred ccccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC--ccccCCCCCCEEECCCCCC
Confidence 66666665532 234556666666666666652 2 2355566666666666666532 2355666666666666666
Q ss_pred cccCcccccCCCCCCEE
Q 045861 418 SGFIPRSFEKLLYLEYL 434 (508)
Q Consensus 418 ~~~~~~~l~~l~~L~~L 434 (508)
++. ..+.++++|++|
T Consensus 185 ~~i--~~l~~L~~L~~L 199 (199)
T d2omxa2 185 SDI--SVLAKLTNLESL 199 (199)
T ss_dssp CCC--GGGGGCTTCSEE
T ss_pred CCC--ccccCCCCCCcC
Confidence 542 235555655554
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=8.6e-16 Score=140.36 Aligned_cols=62 Identities=18% Similarity=0.090 Sum_probs=32.1
Q ss_pred hcCCCCCEEECcCCc-ccccCcccccCCCCCCEEECCCC-cccccCcccccCCCCCCEEeCCCC
Q 045861 378 GGLSNLAFFSLAYNK-LQGSIPESLGDLRSLEFLDLSNN-SFSGFIPRSFEKLLYLEYLNLSFN 439 (508)
Q Consensus 378 ~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n-~~~~~~~~~l~~l~~L~~L~l~~n 439 (508)
..+++|++|++++|. +++.....+..+++|++|++++| .+++.....+.++++|++|++++|
T Consensus 172 ~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 172 RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 345555555555542 44444444555555555555554 344433344555555555555555
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.2e-15 Score=139.45 Aligned_cols=83 Identities=22% Similarity=0.293 Sum_probs=44.7
Q ss_pred CCCEEEccCCccccc-CCccccCCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCc-CcCCCCCCcccccccCCCC
Q 045861 112 NLERLYLERNNFSGT-IPSFIFNASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNY-LTSSTSELSFLSSLRNCRN 189 (508)
Q Consensus 112 ~L~~L~l~~~~~~~~-~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~l~~~~~ 189 (508)
+|++|++++|.++.. +...+..+++|++|+++++.+++..+..++.+++|++|+++++. ++. ......+..+++
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd----~~l~~l~~~~~~ 122 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE----FALQTLLSSCSR 122 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH----HHHHHHHHHCTT
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccc----cccchhhHHHHh
Confidence 344444444433322 23335566777777777777665556666667777777776643 221 011112345566
Q ss_pred CCEEEccCc
Q 045861 190 LKVIDLTGN 198 (508)
Q Consensus 190 L~~L~l~~~ 198 (508)
|++|+++++
T Consensus 123 L~~L~ls~c 131 (284)
T d2astb2 123 LDELNLSWC 131 (284)
T ss_dssp CCEEECCCC
T ss_pred ccccccccc
Confidence 777777664
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.55 E-value=9e-16 Score=144.80 Aligned_cols=262 Identities=18% Similarity=0.186 Sum_probs=141.4
Q ss_pred cChhhcCCCCCCEEeCCCCcCcCCCCCCcccccccCCCCCCEEEccCccCccCC---ChhhhhcccccCeeEccCCcCcc
Q 045861 151 IPSTIANLRNLQWLDLSFNYLTSSTSELSFLSSLRNCRNLKVIDLTGNQLHGIL---PSSMGNLSTSLEYIYMPYCRRSG 227 (508)
Q Consensus 151 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~---~~~~~~~~~~L~~L~l~~~~~~~ 227 (508)
+...+.....+++|++++|.+.... ...+...+...++|+.+.++++...... +..+.
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~-~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~------------------ 83 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEA-ARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR------------------ 83 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHH-HHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH------------------
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHH-HHHHHHHHHhCCCCCEEECCCCcccccccccchHHH------------------
Confidence 4445666777888888877654311 0111234666677777777765433111 11111
Q ss_pred cCChhhhcCCCCcEEEcccCccccc----cCccccCCCCCCcEEccCCcCccccchhhhCCCCCcEEEeeCceeeeeCCc
Q 045861 228 RIPEEIGNLINLITMSLGINKLTGS----IPISLGKLQKLQGLYLYKNKLEGSIPDSLCNLGRLVELQFYDNKLFGSIPA 303 (508)
Q Consensus 228 ~~~~~l~~l~~L~~L~l~~~~~~~~----~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 303 (508)
.+...+..+++|+.|++++|.+... +...+..+++|++|++++|.+.......++.. +..+ ....
T Consensus 84 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~--l~~~---------~~~~ 152 (344)
T d2ca6a1 84 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQEL---------AVNK 152 (344)
T ss_dssp HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHHH---------HHHH
T ss_pred HHHHHHhhCCCcccccccccccccccccchhhhhcccccchheeccccccccccccccccc--cccc---------cccc
Confidence 1123355567777788877776533 22334456677777777776542211111100 0000 0000
Q ss_pred ccCCCCCCCEEEcCCCcccccCC----ccccCccCCcEEEccCCccccc-----cCccccCCCCCcEEECCCCcCCCc--
Q 045861 304 CIGKLSPLRNLLLHSNVLTYVIP----STFLSLRDILVFNFSSNSLNGS-----LPLDIGNLKVVVGIDLSRNNLSDS-- 372 (508)
Q Consensus 304 ~~~~~~~L~~L~l~~n~~~~~~~----~~~~~~~~L~~L~L~~n~l~~~-----~~~~~~~l~~L~~L~l~~n~l~~~-- 372 (508)
.....+.|+.+.+++|.+..... ..+..++.|++|++++|.++.. +...+...++|+.|++++|.++..
T Consensus 153 ~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~ 232 (344)
T d2ca6a1 153 KAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS 232 (344)
T ss_dssp HHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH
T ss_pred ccccCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccc
Confidence 11233455556665555443211 1233455666666666665421 223455667777777777776543
Q ss_pred --cchhhhcCCCCCEEECcCCcccccCcc----ccc--CCCCCCEEECCCCcccccC----ccccc-CCCCCCEEeCCCC
Q 045861 373 --IPTVIGGLSNLAFFSLAYNKLQGSIPE----SLG--DLRSLEFLDLSNNSFSGFI----PRSFE-KLLYLEYLNLSFN 439 (508)
Q Consensus 373 --~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~--~l~~L~~L~L~~n~~~~~~----~~~l~-~l~~L~~L~l~~n 439 (508)
+...+..+++|++|++++|.+++.... .+. ..+.|++|++++|+++... ...+. +.+.|++|++++|
T Consensus 233 ~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N 312 (344)
T d2ca6a1 233 SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGN 312 (344)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred ccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCC
Confidence 234456777888888888877653222 222 2356888888888876532 23332 4677888888888
Q ss_pred cce
Q 045861 440 RLK 442 (508)
Q Consensus 440 ~l~ 442 (508)
++.
T Consensus 313 ~~~ 315 (344)
T d2ca6a1 313 RFS 315 (344)
T ss_dssp BSC
T ss_pred cCC
Confidence 875
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=6.7e-15 Score=121.66 Aligned_cols=127 Identities=20% Similarity=0.179 Sum_probs=77.5
Q ss_pred hCCCCCcEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCE
Q 045861 18 QHLPRLQALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEY 97 (508)
Q Consensus 18 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 97 (508)
.++.++++|++++|.|+ .++..+..+++|++|++++|+++.. +.|..+++|++|++++|++....+..+..+++|++
T Consensus 15 ~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~ 91 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 91 (162)
T ss_dssp ECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred cCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCcccccccccccc
Confidence 45667777777777776 3455556677777777777777644 35667777777777777776444444566677777
Q ss_pred eeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccCh----hhcCCCCCCEEe
Q 045861 98 LVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIPS----TIANLRNLQWLD 165 (508)
Q Consensus 98 L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~----~~~~l~~L~~L~ 165 (508)
|++++|.+... .....+..+++|++|++++|.++. .+. .+..+++|+.|+
T Consensus 92 L~L~~N~i~~~-----------------~~l~~l~~l~~L~~L~l~~N~i~~-~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 92 LILTNNSLVEL-----------------GDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EECCSCCCCCG-----------------GGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEET
T ss_pred ceecccccccc-----------------ccccccccccccchhhcCCCcccc-ccchHHHHHHHCCCcCeeC
Confidence 77776665511 011345556666666666666652 221 345556666554
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.3e-14 Score=119.88 Aligned_cols=126 Identities=18% Similarity=0.164 Sum_probs=69.8
Q ss_pred CCCCCCEEEcCCCcccccCCccccCccCCcEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEE
Q 045861 307 KLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFF 386 (508)
Q Consensus 307 ~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 386 (508)
.+..+++|++++|.++.+ +..+..+++|+.|++++|.++. ++ .+..+++|++|++++|++....+..+..+++|+.|
T Consensus 16 n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp CTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCccccccccccccc
Confidence 344555555555555544 2334455556666666666552 22 35556666666666666664444445556666666
Q ss_pred ECcCCcccccC-cccccCCCCCCEEECCCCcccccCc---ccccCCCCCCEEe
Q 045861 387 SLAYNKLQGSI-PESLGDLRSLEFLDLSNNSFSGFIP---RSFEKLLYLEYLN 435 (508)
Q Consensus 387 ~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~~~~~~~---~~l~~l~~L~~L~ 435 (508)
++++|.++... ...+..+++|+.|++++|.++.... ..+..+|+|++||
T Consensus 93 ~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 93 ILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp ECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred eeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 66666665321 1345566666666666666653321 2355566666665
No 30
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.52 E-value=1.7e-15 Score=142.96 Aligned_cols=254 Identities=15% Similarity=0.217 Sum_probs=149.4
Q ss_pred cCCccccCCCCCcEEEccCcccccc----cChhhcCCCCCCEEeCCCCcCcCCCCCC-----cccccccCCCCCCEEEcc
Q 045861 126 TIPSFIFNASKLSILGIRTNSFSGT----IPSTIANLRNLQWLDLSFNYLTSSTSEL-----SFLSSLRNCRNLKVIDLT 196 (508)
Q Consensus 126 ~~~~~~~~l~~L~~L~l~~~~i~~~----~~~~~~~l~~L~~L~l~~n~~~~~~~~~-----~~~~~l~~~~~L~~L~l~ 196 (508)
.+...+.+...++.|++++|.+... +...+...++|+.+++.++......... .....+..+++|+.|+++
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 3455677789999999999988643 3344567899999999987654332211 122445667778888888
Q ss_pred CccCccCCChhhhhcccccCeeEccCCcCcccCChhhhcCCCCcEEEcccCccccccCcc-------------ccCCCCC
Q 045861 197 GNQLHGILPSSMGNLSTSLEYIYMPYCRRSGRIPEEIGNLINLITMSLGINKLTGSIPIS-------------LGKLQKL 263 (508)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~-------------l~~~~~L 263 (508)
+|.++......+ ...+...+.|+.|++++|.+....... ....+.|
T Consensus 102 ~n~i~~~~~~~l---------------------~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L 160 (344)
T d2ca6a1 102 DNAFGPTAQEPL---------------------IDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPL 160 (344)
T ss_dssp SCCCCTTTHHHH---------------------HHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred ccccccccccch---------------------hhhhcccccchheecccccccccccccccccccccccccccccCccc
Confidence 777654322222 223566789999999999875321111 1345567
Q ss_pred CcEEccCCcCcccc----chhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEE
Q 045861 264 QGLYLYKNKLEGSI----PDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFN 339 (508)
Q Consensus 264 ~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ 339 (508)
+.+.+++|.+.... ...+...+++++|++++|.+..... .......+..+++|+.|+
T Consensus 161 ~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~-------------------~~~l~~~l~~~~~L~~L~ 221 (344)
T d2ca6a1 161 RSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGI-------------------EHLLLEGLAYCQELKVLD 221 (344)
T ss_dssp CEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHH-------------------HHHHHTTGGGCTTCCEEE
T ss_pred ceeecccccccccccccccchhhhhhhhccccccccccccccc-------------------ccchhhhhcchhhhcccc
Confidence 77777776654322 2223344555555555555432100 000112234445555555
Q ss_pred ccCCccccc----cCccccCCCCCcEEECCCCcCCCccchh----hhc--CCCCCEEECcCCcccccC----cccc-cCC
Q 045861 340 FSSNSLNGS----LPLDIGNLKVVVGIDLSRNNLSDSIPTV----IGG--LSNLAFFSLAYNKLQGSI----PESL-GDL 404 (508)
Q Consensus 340 L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~----~~~--l~~L~~L~L~~n~l~~~~----~~~~-~~l 404 (508)
+++|.++.. +...+...++|++|++++|.+.+..... +.. .+.|++|++++|.++... ...+ ...
T Consensus 222 Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~ 301 (344)
T d2ca6a1 222 LQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM 301 (344)
T ss_dssp CCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHC
T ss_pred cccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccC
Confidence 555555321 3334556677777777777776543332 222 356888888888876432 2223 245
Q ss_pred CCCCEEECCCCcccc
Q 045861 405 RSLEFLDLSNNSFSG 419 (508)
Q Consensus 405 ~~L~~L~L~~n~~~~ 419 (508)
+.|+.|++++|.+..
T Consensus 302 ~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 302 PDLLFLELNGNRFSE 316 (344)
T ss_dssp TTCCEEECTTSBSCT
T ss_pred CCCCEEECCCCcCCC
Confidence 778888888888864
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.52 E-value=3.5e-14 Score=111.43 Aligned_cols=78 Identities=27% Similarity=0.389 Sum_probs=36.4
Q ss_pred cEEecCCCcCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEeeCccc
Q 045861 24 QALDINNNHVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLVLENN 103 (508)
Q Consensus 24 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 103 (508)
|+|++++|.++ .++ .+..+++|++|++++|+++ .+|+.++.+++|++|++++|++.+ ++ .+.++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 34555555554 222 2445555555555555554 233344555555555555555442 22 2444444444444444
Q ss_pred cCC
Q 045861 104 NFD 106 (508)
Q Consensus 104 ~~~ 106 (508)
++.
T Consensus 76 ~i~ 78 (124)
T d1dcea3 76 RLQ 78 (124)
T ss_dssp CCC
T ss_pred ccC
Confidence 443
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=8.6e-15 Score=120.19 Aligned_cols=111 Identities=22% Similarity=0.245 Sum_probs=79.2
Q ss_pred CcEEECCCCcCCCccchhhhcCCCCCEEECcCCc-ccccCcccccCCCCCCEEECCCCcccccCcccccCCCCCCEEeCC
Q 045861 359 VVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNK-LQGSIPESLGDLRSLEFLDLSNNSFSGFIPRSFEKLLYLEYLNLS 437 (508)
Q Consensus 359 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~ 437 (508)
.+.++.+++.+. ..|..+.++++|++|++++|+ ++...+..|.++++|+.|++++|+++...+++|.++++|++|+|+
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 344666666665 345556667777888876553 665556677778888888888888887777778888888888888
Q ss_pred CCcceecCCCc-cccCCCCcccccCCCCCCCCCCC
Q 045861 438 FNRLKGEIPSG-ESFANFSDNSFMGNSFLCGSPNL 471 (508)
Q Consensus 438 ~n~l~~~~p~~-~~~~~l~~l~l~~n~~~c~~~~~ 471 (508)
+|+++ .+|.. .....+..+++++|||.|+|...
T Consensus 89 ~N~l~-~l~~~~~~~~~l~~L~L~~Np~~C~C~~~ 122 (156)
T d2ifga3 89 FNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALR 122 (156)
T ss_dssp SSCCS-CCCSTTTCSCCCCEEECCSSCCCCCGGGH
T ss_pred CCCCc-ccChhhhccccccccccCCCcccCCchHH
Confidence 88887 55554 33446778888888888888643
No 33
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.51 E-value=7.3e-14 Score=109.58 Aligned_cols=102 Identities=26% Similarity=0.348 Sum_probs=71.1
Q ss_pred cEEEccCCccccccCccccCCCCCcEEECCCCcCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCC
Q 045861 336 LVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRNNLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNN 415 (508)
Q Consensus 336 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 415 (508)
+.|++++|+++ .++ .+..+..|++|++++|+++ .+|..+..+++|+.|++++|.++. ++ .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 35677777776 333 3667777777777777776 456667777777777777777773 33 4677777888888888
Q ss_pred cccccCc-ccccCCCCCCEEeCCCCcce
Q 045861 416 SFSGFIP-RSFEKLLYLEYLNLSFNRLK 442 (508)
Q Consensus 416 ~~~~~~~-~~l~~l~~L~~L~l~~n~l~ 442 (508)
++.+... ..+..+++|+.|++++|++.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 7775432 45677777888888888776
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=3e-12 Score=104.72 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=90.8
Q ss_pred cCCcEEEccCCccccccCccccCCCCCcEEECCCC-cCCCccchhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEE
Q 045861 333 RDILVFNFSSNSLNGSLPLDIGNLKVVVGIDLSRN-NLSDSIPTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLD 411 (508)
Q Consensus 333 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 411 (508)
...+.++++++.+. ..|..+..+++|++|++++| .++...+.+|.++++|+.|++++|+++...+.+|..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 44566788887777 56677888899999999766 48866677899999999999999999977788899999999999
Q ss_pred CCCCcccccCcccccCCCCCCEEeCCCCccee
Q 045861 412 LSNNSFSGFIPRSFEKLLYLEYLNLSFNRLKG 443 (508)
Q Consensus 412 L~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~ 443 (508)
|++|+++...++.+..+ +|+.|+|++|++..
T Consensus 87 Ls~N~l~~l~~~~~~~~-~l~~L~L~~Np~~C 117 (156)
T d2ifga3 87 LSFNALESLSWKTVQGL-SLQELVLSGNPLHC 117 (156)
T ss_dssp CCSSCCSCCCSTTTCSC-CCCEEECCSSCCCC
T ss_pred ccCCCCcccChhhhccc-cccccccCCCcccC
Confidence 99999997666666554 79999999999964
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.28 E-value=3.7e-14 Score=121.44 Aligned_cols=149 Identities=21% Similarity=0.217 Sum_probs=86.0
Q ss_pred CCcEEecCCC--cCCCCCCcCCcCCCCCcEEEcccCCCCCCCCcccCCCCCCCeEEccCCccccCCchhccCCCCCCEee
Q 045861 22 RLQALDINNN--HVTGPVPRNLWQCQELIAISLSHNQLTGLIPRDIGNLTSARALLLGNNNLIGEIPHEIGNLHNLEYLV 99 (508)
Q Consensus 22 ~L~~L~l~~~--~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 99 (508)
.++.+++++. .++ .++..+..+++|++|++++|+++.+ +.+.++++|++|++++|.+. .++..+..+++|++|+
T Consensus 24 ~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~~i--~~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~ 99 (198)
T d1m9la_ 24 EAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEKI--SSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELW 99 (198)
T ss_dssp TCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEESCC--CCHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEE
T ss_pred ccceeeeecccCchh-hhhhHHhcccccceeECcccCCCCc--ccccCCccccChhhcccccc-cccccccccccccccc
Confidence 3444555443 233 3445566677777777777777644 34667777777777777766 4444444455666666
Q ss_pred CccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcccccccC-hhhcCCCCCCEEeCCCCcCcCCCCCC
Q 045861 100 LENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNSFSGTIP-STIANLRNLQWLDLSFNYLTSSTSEL 178 (508)
Q Consensus 100 L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~ 178 (508)
+++|.++. + ..+..+++|++|++++|+++.... ..+..+++|+.|++++|++.......
T Consensus 100 l~~N~i~~-------------------l-~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 159 (198)
T d1m9la_ 100 ISYNQIAS-------------------L-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKEN 159 (198)
T ss_dssp CSEEECCC-------------------H-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTT
T ss_pred cccccccc-------------------c-ccccccccccccccccchhccccccccccCCCccceeecCCCccccCcccc
Confidence 66666552 1 235556677777777777653321 34666777777777777655432211
Q ss_pred ccc-----ccccCCCCCCEEE
Q 045861 179 SFL-----SSLRNCRNLKVID 194 (508)
Q Consensus 179 ~~~-----~~l~~~~~L~~L~ 194 (508)
... ..+..+++|+.|+
T Consensus 160 ~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 160 NATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp TTHHHHHHHHHHHCSSCCEES
T ss_pred cchhhHHHHHHHHCCCcCEeC
Confidence 110 1145567777765
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.28 E-value=3.4e-14 Score=121.67 Aligned_cols=80 Identities=18% Similarity=0.168 Sum_probs=38.9
Q ss_pred CCcEEccCC--cCccccchhhhCCCCCcEEEeeCceeeeeCCcccCCCCCCCEEEcCCCcccccCCccccCccCCcEEEc
Q 045861 263 LQGLYLYKN--KLEGSIPDSLCNLGRLVELQFYDNKLFGSIPACIGKLSPLRNLLLHSNVLTYVIPSTFLSLRDILVFNF 340 (508)
Q Consensus 263 L~~L~l~~n--~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~L 340 (508)
.+.+++.+. .+. .++..+..+++|++|++++|.+.. ++ .+..+++|+.|++++|.+... +..+..+++|++|++
T Consensus 25 ~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~~i-~~~~~~~~~L~~L~l 100 (198)
T d1m9la_ 25 AEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKI-ENLDAVADTLEELWI 100 (198)
T ss_dssp CSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEECSC-SSHHHHHHHCCEEEC
T ss_pred cceeeeecccCchh-hhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccccc-ccccccccccccccc
Confidence 445555443 122 444556666666666666666642 22 345555666666665555432 122222334444444
Q ss_pred cCCccc
Q 045861 341 SSNSLN 346 (508)
Q Consensus 341 ~~n~l~ 346 (508)
++|.++
T Consensus 101 ~~N~i~ 106 (198)
T d1m9la_ 101 SYNQIA 106 (198)
T ss_dssp SEEECC
T ss_pred cccccc
Confidence 444443
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.42 E-value=1.1e-08 Score=83.64 Aligned_cols=82 Identities=24% Similarity=0.203 Sum_probs=41.6
Q ss_pred cCCCCCcEEECCCCcCCCcc--chhhhcCCCCCEEECcCCcccccCcccccCCCCCCEEECCCCcccccCcc-------c
Q 045861 354 GNLKVVVGIDLSRNNLSDSI--PTVIGGLSNLAFFSLAYNKLQGSIPESLGDLRSLEFLDLSNNSFSGFIPR-------S 424 (508)
Q Consensus 354 ~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~-------~ 424 (508)
..++.|++|++++|+++... +..+..+++|+.|++++|.++....-.+.....|+.|++++|.+.....+ .
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 34555566666666555322 23345566666666666666533222223334566666666666543221 1
Q ss_pred ccCCCCCCEEe
Q 045861 425 FEKLLYLEYLN 435 (508)
Q Consensus 425 l~~l~~L~~L~ 435 (508)
+..+|+|+.||
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 34456666553
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24 E-value=5.1e-08 Score=79.54 Aligned_cols=40 Identities=25% Similarity=0.159 Sum_probs=16.6
Q ss_pred CCCCCcEEEccCcccccccChhhcCCCCCCEEeCCCCcCc
Q 045861 133 NASKLSILGIRTNSFSGTIPSTIANLRNLQWLDLSFNYLT 172 (508)
Q Consensus 133 ~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~ 172 (508)
.+++|+.|++++|.|+...+..+.....|+++++.+|++.
T Consensus 89 ~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 89 KAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred hCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 3444444444444444322222223334455555555443
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.10 E-value=1.9e-06 Score=70.34 Aligned_cols=110 Identities=19% Similarity=0.145 Sum_probs=65.7
Q ss_pred ccCCcEEEccCC-ccccc----cCccccCCCCCcEEECCCCcCCCc----cchhhhcCCCCCEEECcCCccccc----Cc
Q 045861 332 LRDILVFNFSSN-SLNGS----LPLDIGNLKVVVGIDLSRNNLSDS----IPTVIGGLSNLAFFSLAYNKLQGS----IP 398 (508)
Q Consensus 332 ~~~L~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~ 398 (508)
.++|++|+|+++ .+... +...+...+.|++|++++|.+.+. +...+...+.|++|++++|.+++. +.
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 345555555543 23211 223445556677777777766532 234455667788888888877643 23
Q ss_pred ccccCCCCCCEEECCCCccccc-------CcccccCCCCCCEEeCCCCcc
Q 045861 399 ESLGDLRSLEFLDLSNNSFSGF-------IPRSFEKLLYLEYLNLSFNRL 441 (508)
Q Consensus 399 ~~~~~l~~L~~L~L~~n~~~~~-------~~~~l~~l~~L~~L~l~~n~l 441 (508)
.++...++|++|++++|.+... +.+.+...++|+.|+++.+..
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 4556667788888887765432 334455567888888876643
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.79 E-value=7e-06 Score=66.79 Aligned_cols=118 Identities=17% Similarity=0.126 Sum_probs=74.8
Q ss_pred hCCCCCcEEecCCC-cCCCC----CCcCCcCCCCCcEEEcccCCCCCC----CCcccCCCCCCCeEEccCCccccC----
Q 045861 18 QHLPRLQALDINNN-HVTGP----VPRNLWQCQELIAISLSHNQLTGL----IPRDIGNLTSARALLLGNNNLIGE---- 84 (508)
Q Consensus 18 ~~~~~L~~L~l~~~-~~~~~----~~~~~~~~~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~---- 84 (508)
.+.++|++|+++++ .+... +...+...+.|++|+|++|.+... +.+.+...+.|++|++++|.+...
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 56788999999874 45422 233456778899999999888632 233455678889999998887753
Q ss_pred CchhccCCCCCCEeeCccccCCCCCCCCCCEEEccCCcccccCCccccCCCCCcEEEccCcc
Q 045861 85 IPHEIGNLHNLEYLVLENNNFDGPRHSNLERLYLERNNFSGTIPSFIFNASKLSILGIRTNS 146 (508)
Q Consensus 85 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 146 (508)
+..++...+.|++|++++|.+..++- .....+...+...+.|+.|+++.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~-----------~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGN-----------QVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCH-----------HHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhCCcCCEEECCCCcCCCccH-----------HHHHHHHHHHHhCCCccEeeCcCCC
Confidence 23446667778888887776542100 0000133444556777888776554
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.57 E-value=2.1e-05 Score=63.80 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=68.7
Q ss_pred CccCCcEEEccCC-cccc----ccCccccCCCCCcEEECCCCcCCCcc----chhhhcCCCCCEEECcCCccccc----C
Q 045861 331 SLRDILVFNFSSN-SLNG----SLPLDIGNLKVVVGIDLSRNNLSDSI----PTVIGGLSNLAFFSLAYNKLQGS----I 397 (508)
Q Consensus 331 ~~~~L~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~----~ 397 (508)
..++|++|+++++ .++. .+..++...+.|++|++++|.++... ...+...++++.+++++|.++.. +
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 3455666666552 3322 13334456677777788777776442 23455677888888888877642 2
Q ss_pred cccccCCCCCCEEECC--CCcccc----cCcccccCCCCCCEEeCCCCcc
Q 045861 398 PESLGDLRSLEFLDLS--NNSFSG----FIPRSFEKLLYLEYLNLSFNRL 441 (508)
Q Consensus 398 ~~~~~~l~~L~~L~L~--~n~~~~----~~~~~l~~l~~L~~L~l~~n~l 441 (508)
...+...++|+.++|+ +|.+.. .+.+.+...+.|+.|+++.+..
T Consensus 95 ~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 3555667788875554 556654 3445556778888888877654
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.96 E-value=7.7e-05 Score=60.36 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=9.6
Q ss_pred cccCCCCCCEEEccCccCc
Q 045861 183 SLRNCRNLKVIDLTGNQLH 201 (508)
Q Consensus 183 ~l~~~~~L~~L~l~~~~~~ 201 (508)
.+...++|++|++++|.++
T Consensus 41 al~~n~~L~~L~Ls~n~l~ 59 (166)
T d1io0a_ 41 ALKTNTYVKKFSIVGTRSN 59 (166)
T ss_dssp HHTTCCSCCEEECTTSCCC
T ss_pred HHhcCCccCeeeccCCccc
Confidence 3444455555555555444
Done!