Query 045862
Match_columns 271
No_of_seqs 212 out of 1475
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 06:16:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 1.2E-36 2.7E-41 234.2 17.7 233 1-244 34-320 (322)
2 PRK03592 haloalkane dehalogena 100.0 1.3E-34 2.9E-39 232.6 18.0 240 1-246 19-291 (295)
3 PLN02824 hydrolase, alpha/beta 100.0 4.1E-35 8.9E-40 235.4 14.9 237 1-244 20-294 (294)
4 PRK00870 haloalkane dehalogena 100.0 1.3E-34 2.8E-39 233.3 17.1 241 1-244 36-301 (302)
5 TIGR02240 PHA_depoly_arom poly 100.0 1.5E-33 3.2E-38 224.4 17.7 239 1-250 14-272 (276)
6 PLN02679 hydrolase, alpha/beta 100.0 6.5E-34 1.4E-38 233.6 14.7 235 1-244 74-357 (360)
7 PLN02965 Probable pheophorbida 100.0 6.2E-33 1.3E-37 218.2 16.9 225 11-244 5-253 (255)
8 PRK10349 carboxylesterase BioH 100.0 1.8E-33 3.9E-38 221.6 13.3 231 1-243 4-255 (256)
9 PRK03204 haloalkane dehalogena 100.0 4.9E-33 1.1E-37 222.0 14.2 237 1-242 26-286 (286)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.5E-32 3.2E-37 219.4 13.9 238 1-242 22-281 (282)
11 PLN02578 hydrolase 100.0 7.7E-32 1.7E-36 221.2 16.1 231 1-242 78-353 (354)
12 PRK11126 2-succinyl-6-hydroxy- 100.0 4E-32 8.6E-37 212.2 13.7 224 9-243 2-241 (242)
13 PRK10673 acyl-CoA esterase; Pr 100.0 3.6E-31 7.9E-36 208.4 17.0 224 8-243 15-254 (255)
14 TIGR03611 RutD pyrimidine util 100.0 4.7E-31 1E-35 207.6 14.6 236 1-243 1-257 (257)
15 TIGR03056 bchO_mg_che_rel puta 100.0 1E-30 2.2E-35 208.3 16.3 234 1-242 18-278 (278)
16 PLN03084 alpha/beta hydrolase 100.0 1.1E-30 2.5E-35 213.8 16.1 236 1-243 117-383 (383)
17 PLN03087 BODYGUARD 1 domain co 100.0 1.8E-30 3.9E-35 216.5 15.7 240 1-244 188-479 (481)
18 PRK06489 hypothetical protein; 100.0 5.8E-31 1.3E-35 216.6 12.1 239 1-244 52-357 (360)
19 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.1E-30 2.4E-35 204.4 11.7 235 1-242 2-251 (251)
20 PRK08775 homoserine O-acetyltr 100.0 1.7E-30 3.7E-35 212.6 10.3 238 1-245 48-340 (343)
21 TIGR01738 bioH putative pimelo 100.0 1.2E-29 2.6E-34 197.9 13.2 223 7-241 1-245 (245)
22 PLN02385 hydrolase; alpha/beta 100.0 5.3E-29 1.2E-33 204.3 17.3 227 9-245 87-346 (349)
23 TIGR03695 menH_SHCHC 2-succiny 100.0 4.4E-29 9.5E-34 195.1 15.8 228 9-242 1-251 (251)
24 PLN02211 methyl indole-3-aceta 100.0 6.6E-28 1.4E-32 190.8 21.9 232 3-244 11-270 (273)
25 KOG1454 Predicted hydrolase/ac 100.0 1.5E-28 3.2E-33 197.2 17.3 232 8-244 57-324 (326)
26 KOG4409 Predicted hydrolase/ac 100.0 5E-29 1.1E-33 192.8 12.7 107 8-117 89-197 (365)
27 TIGR01250 pro_imino_pep_2 prol 100.0 2.2E-28 4.7E-33 195.4 14.3 229 9-242 25-288 (288)
28 PRK07581 hypothetical protein; 100.0 5.8E-29 1.3E-33 203.5 9.5 239 1-244 28-336 (339)
29 PRK10749 lysophospholipase L2; 100.0 2.5E-27 5.4E-32 192.8 18.6 114 1-116 43-167 (330)
30 PF12697 Abhydrolase_6: Alpha/ 100.0 2.2E-28 4.8E-33 188.4 11.9 212 12-236 1-228 (228)
31 PRK14875 acetoin dehydrogenase 100.0 3.2E-28 6.9E-33 201.8 13.6 234 2-243 122-370 (371)
32 PHA02857 monoglyceride lipase; 100.0 1.8E-27 3.9E-32 189.5 16.4 220 9-244 25-273 (276)
33 PLN02298 hydrolase, alpha/beta 100.0 3.7E-27 8E-32 192.2 15.8 226 9-244 59-317 (330)
34 PLN02894 hydrolase, alpha/beta 100.0 7.6E-27 1.6E-31 193.9 17.4 107 8-117 104-213 (402)
35 TIGR01392 homoserO_Ac_trn homo 99.9 7.7E-28 1.7E-32 197.5 9.8 115 1-117 18-164 (351)
36 PLN02980 2-oxoglutarate decarb 99.9 1.4E-27 3.1E-32 225.5 12.0 240 2-246 1361-1641(1655)
37 PRK00175 metX homoserine O-ace 99.9 4.9E-27 1.1E-31 194.2 13.5 114 1-117 35-184 (379)
38 TIGR01249 pro_imino_pep_1 prol 99.9 1.1E-25 2.3E-30 181.6 13.1 113 1-116 17-131 (306)
39 KOG2984 Predicted hydrolase [G 99.9 9.7E-26 2.1E-30 160.9 10.2 228 1-244 33-276 (277)
40 PRK05855 short chain dehydroge 99.9 5.2E-25 1.1E-29 193.0 14.3 111 1-113 15-129 (582)
41 PLN02652 hydrolase; alpha/beta 99.9 1.1E-24 2.3E-29 179.8 15.2 226 10-245 137-388 (395)
42 PLN02511 hydrolase 99.9 5.4E-25 1.2E-29 182.1 13.3 251 8-267 99-385 (388)
43 COG2267 PldB Lysophospholipase 99.9 1.8E-23 3.8E-28 166.3 17.9 227 10-245 35-295 (298)
44 COG1647 Esterase/lipase [Gener 99.9 9.1E-25 2E-29 158.5 9.3 215 8-243 14-243 (243)
45 KOG2382 Predicted alpha/beta h 99.9 8E-24 1.7E-28 163.7 14.0 224 8-244 51-313 (315)
46 KOG1455 Lysophospholipase [Lip 99.9 1.3E-23 2.8E-28 160.1 14.0 224 11-244 56-312 (313)
47 TIGR03100 hydr1_PEP hydrolase, 99.9 7.3E-23 1.6E-27 162.2 12.9 221 8-242 25-273 (274)
48 KOG2564 Predicted acetyltransf 99.9 3.6E-22 7.7E-27 149.7 12.4 105 8-114 73-181 (343)
49 TIGR01607 PST-A Plasmodium sub 99.9 1.1E-21 2.3E-26 159.4 16.2 231 9-242 21-331 (332)
50 PRK06765 homoserine O-acetyltr 99.9 3.9E-22 8.4E-27 164.0 11.7 115 1-117 43-198 (389)
51 PRK10985 putative hydrolase; P 99.9 2.8E-21 6E-26 156.9 16.0 228 9-244 58-320 (324)
52 PRK05077 frsA fermentation/res 99.9 1.1E-20 2.3E-25 157.3 17.7 207 9-244 194-412 (414)
53 PRK11071 esterase YqiA; Provis 99.9 2.1E-20 4.6E-25 139.6 14.6 177 10-242 2-189 (190)
54 TIGR01838 PHA_synth_I poly(R)- 99.9 6.1E-21 1.3E-25 161.1 12.8 107 9-117 188-304 (532)
55 TIGR03101 hydr2_PEP hydrolase, 99.8 5.3E-20 1.1E-24 143.3 13.7 104 9-116 25-135 (266)
56 PRK13604 luxD acyl transferase 99.8 7.7E-20 1.7E-24 143.2 13.6 101 9-115 37-141 (307)
57 PLN02872 triacylglycerol lipas 99.8 3.5E-20 7.5E-25 152.5 11.0 108 9-117 74-199 (395)
58 COG0596 MhpC Predicted hydrola 99.8 1.4E-18 3.1E-23 136.5 18.3 102 9-116 21-124 (282)
59 TIGR01836 PHA_synth_III_C poly 99.8 3.1E-19 6.6E-24 146.6 12.3 102 9-117 62-173 (350)
60 PF00561 Abhydrolase_1: alpha/ 99.8 3E-19 6.5E-24 138.1 11.5 198 37-238 1-229 (230)
61 PRK10566 esterase; Provisional 99.8 4.1E-18 8.8E-23 133.7 17.7 105 9-113 27-140 (249)
62 PRK07868 acyl-CoA synthetase; 99.8 2.9E-18 6.2E-23 157.8 15.6 232 8-246 66-363 (994)
63 PF12695 Abhydrolase_5: Alpha/ 99.7 5.3E-17 1.1E-21 116.6 13.0 93 11-113 1-93 (145)
64 TIGR03230 lipo_lipase lipoprot 99.7 3.3E-17 7.1E-22 135.0 12.6 105 8-116 40-155 (442)
65 COG3208 GrsT Predicted thioest 99.7 2.6E-17 5.7E-22 122.6 10.6 218 8-244 6-236 (244)
66 cd00707 Pancreat_lipase_like P 99.7 1.2E-16 2.6E-21 126.2 10.1 107 8-116 35-148 (275)
67 PRK11460 putative hydrolase; P 99.7 2.1E-15 4.5E-20 116.5 16.7 105 9-113 16-136 (232)
68 KOG2565 Predicted hydrolases o 99.7 5.3E-16 1.2E-20 121.2 12.8 103 10-115 153-264 (469)
69 KOG4667 Predicted esterase [Li 99.7 2.1E-15 4.5E-20 109.4 14.0 212 5-242 29-256 (269)
70 TIGR02821 fghA_ester_D S-formy 99.6 3.1E-14 6.7E-19 113.0 16.9 110 8-117 41-175 (275)
71 PF00975 Thioesterase: Thioest 99.6 8.3E-15 1.8E-19 113.4 12.9 102 10-116 1-105 (229)
72 PLN00021 chlorophyllase 99.6 3.9E-15 8.5E-20 119.2 11.1 105 7-115 50-166 (313)
73 PF06342 DUF1057: Alpha/beta h 99.6 8.9E-15 1.9E-19 111.3 12.0 103 11-117 37-139 (297)
74 KOG1552 Predicted alpha/beta h 99.6 1.6E-14 3.4E-19 108.6 13.0 184 9-245 60-253 (258)
75 PLN02442 S-formylglutathione h 99.6 3.4E-14 7.3E-19 113.1 15.7 106 9-116 47-179 (283)
76 TIGR03502 lipase_Pla1_cef extr 99.6 1.2E-14 2.6E-19 127.1 11.1 92 10-101 450-576 (792)
77 PRK10162 acetyl esterase; Prov 99.6 6.7E-13 1.4E-17 107.5 18.5 106 9-116 81-196 (318)
78 KOG1838 Alpha/beta hydrolase [ 99.6 3.5E-13 7.5E-18 108.6 16.3 106 7-114 123-235 (409)
79 KOG2931 Differentiation-relate 99.5 2.5E-13 5.4E-18 103.4 13.9 234 2-245 35-307 (326)
80 TIGR01840 esterase_phb esteras 99.5 7E-14 1.5E-18 106.8 11.2 109 8-116 12-131 (212)
81 COG0429 Predicted hydrolase of 99.5 2.2E-13 4.7E-18 106.0 13.7 231 9-244 75-340 (345)
82 PF03096 Ndr: Ndr family; Int 99.5 6E-14 1.3E-18 108.1 10.1 226 9-244 23-279 (283)
83 PF00326 Peptidase_S9: Prolyl 99.5 2.6E-13 5.6E-18 103.9 12.7 187 25-245 3-210 (213)
84 KOG4391 Predicted alpha/beta h 99.5 1.5E-13 3.2E-18 100.1 8.9 197 8-246 77-284 (300)
85 COG2021 MET2 Homoserine acetyl 99.5 2.2E-13 4.9E-18 107.6 8.8 117 1-119 38-186 (368)
86 TIGR00976 /NonD putative hydro 99.5 2.2E-13 4.9E-18 118.2 8.6 106 8-116 21-133 (550)
87 COG1506 DAP2 Dipeptidyl aminop 99.5 1.2E-12 2.5E-17 115.0 13.1 199 10-244 395-616 (620)
88 TIGR01839 PHA_synth_II poly(R) 99.4 9.4E-13 2E-17 110.9 10.8 102 9-117 215-330 (560)
89 PF05728 UPF0227: Uncharacteri 99.4 3.9E-11 8.4E-16 88.6 16.8 89 11-117 1-93 (187)
90 TIGR01849 PHB_depoly_PhaZ poly 99.4 1.9E-12 4.1E-17 106.0 10.4 102 10-117 103-210 (406)
91 PF07819 PGAP1: PGAP1-like pro 99.4 8.1E-12 1.7E-16 95.6 13.1 110 8-118 3-126 (225)
92 PF12146 Hydrolase_4: Putative 99.4 9E-13 2E-17 83.1 5.9 64 9-73 16-79 (79)
93 PF02230 Abhydrolase_2: Phosph 99.4 1.2E-11 2.6E-16 94.7 12.9 107 9-115 14-140 (216)
94 PF01738 DLH: Dienelactone hyd 99.4 8E-12 1.7E-16 95.9 11.8 105 8-113 13-130 (218)
95 PF10230 DUF2305: Uncharacteri 99.3 2.3E-11 5.1E-16 95.6 11.2 108 10-117 3-124 (266)
96 COG3319 Thioesterase domains o 99.3 2.7E-11 6E-16 93.3 10.8 101 10-116 1-104 (257)
97 PF06500 DUF1100: Alpha/beta h 99.3 7.1E-11 1.5E-15 96.1 13.6 106 10-117 191-298 (411)
98 PRK10252 entF enterobactin syn 99.3 1.7E-11 3.6E-16 117.3 11.3 103 7-115 1066-1171(1296)
99 COG2945 Predicted hydrolase of 99.3 3.3E-10 7.1E-15 81.4 13.4 103 9-113 28-135 (210)
100 PF06821 Ser_hydrolase: Serine 99.3 9.5E-11 2.1E-15 85.6 10.9 88 12-115 1-91 (171)
101 COG0400 Predicted esterase [Ge 99.3 2.5E-10 5.3E-15 85.5 13.0 108 9-117 18-136 (207)
102 PF12740 Chlorophyllase2: Chlo 99.2 5.4E-11 1.2E-15 91.1 9.4 108 6-115 14-131 (259)
103 COG0412 Dienelactone hydrolase 99.2 9.3E-10 2E-14 84.9 16.3 105 10-115 28-146 (236)
104 PLN02733 phosphatidylcholine-s 99.2 8.3E-11 1.8E-15 98.0 9.3 96 20-118 105-204 (440)
105 PF05448 AXE1: Acetyl xylan es 99.2 6.2E-10 1.3E-14 89.6 11.7 107 9-117 83-211 (320)
106 COG3243 PhaC Poly(3-hydroxyalk 99.1 1.8E-10 3.8E-15 92.7 8.3 107 9-117 107-219 (445)
107 PF02273 Acyl_transf_2: Acyl t 99.1 7E-11 1.5E-15 88.0 5.3 101 9-115 30-134 (294)
108 PF09752 DUF2048: Uncharacteri 99.1 3.6E-09 7.8E-14 84.0 15.0 224 9-242 92-347 (348)
109 PF07859 Abhydrolase_3: alpha/ 99.1 1.5E-09 3.2E-14 83.0 11.9 99 12-115 1-110 (211)
110 PF07224 Chlorophyllase: Chlor 99.1 4.7E-10 1E-14 84.5 8.0 108 6-117 43-159 (307)
111 PF01674 Lipase_2: Lipase (cla 99.1 4.1E-10 8.9E-15 85.1 6.7 88 10-100 2-95 (219)
112 COG4757 Predicted alpha/beta h 99.0 4.1E-09 9E-14 78.0 9.8 101 11-113 32-136 (281)
113 PF00151 Lipase: Lipase; Inte 99.0 6.4E-10 1.4E-14 89.7 6.2 108 8-117 70-189 (331)
114 PRK10115 protease 2; Provision 99.0 1E-08 2.2E-13 91.1 14.2 110 7-116 443-560 (686)
115 PF06057 VirJ: Bacterial virul 99.0 5.4E-09 1.2E-13 76.0 10.0 98 10-116 3-108 (192)
116 PF08538 DUF1749: Protein of u 99.0 3.7E-09 8E-14 82.7 9.3 97 10-117 34-150 (303)
117 COG3571 Predicted hydrolase of 99.0 1.1E-08 2.4E-13 71.4 10.5 108 7-116 11-125 (213)
118 PF06028 DUF915: Alpha/beta hy 99.0 7.4E-09 1.6E-13 80.2 10.6 107 9-117 11-145 (255)
119 PF10503 Esterase_phd: Esteras 99.0 1.2E-08 2.5E-13 77.3 10.8 108 9-116 16-133 (220)
120 COG0657 Aes Esterase/lipase [L 98.9 3.3E-07 7.3E-12 74.3 19.9 104 9-117 79-193 (312)
121 PF03403 PAF-AH_p_II: Platelet 98.9 2.8E-09 6E-14 87.9 7.7 106 9-117 100-264 (379)
122 KOG1515 Arylacetamide deacetyl 98.9 2.4E-07 5.2E-12 74.6 18.3 211 9-243 90-334 (336)
123 PF05990 DUF900: Alpha/beta hy 98.9 1.3E-08 2.8E-13 78.4 9.6 106 8-115 17-137 (233)
124 KOG2624 Triglyceride lipase-ch 98.9 4.5E-09 9.9E-14 86.2 7.1 109 7-117 71-201 (403)
125 PF03959 FSH1: Serine hydrolas 98.9 1.1E-08 2.4E-13 78.0 8.0 158 8-230 3-207 (212)
126 smart00824 PKS_TE Thioesterase 98.8 3.5E-08 7.5E-13 75.1 10.2 95 14-115 2-102 (212)
127 PF02129 Peptidase_S15: X-Pro 98.8 2.4E-08 5.1E-13 79.3 9.5 106 9-117 20-138 (272)
128 COG1075 LipA Predicted acetylt 98.8 1.4E-08 3E-13 82.7 8.0 102 10-117 60-166 (336)
129 COG3458 Acetyl esterase (deace 98.8 1.7E-08 3.8E-13 76.6 7.3 108 8-117 82-212 (321)
130 PRK05371 x-prolyl-dipeptidyl a 98.8 2.5E-07 5.4E-12 83.1 14.3 86 27-115 270-373 (767)
131 PF05057 DUF676: Putative seri 98.8 3E-08 6.4E-13 75.8 7.4 91 10-100 5-98 (217)
132 KOG1553 Predicted alpha/beta h 98.7 1E-07 2.2E-12 74.8 8.4 104 7-115 240-345 (517)
133 PTZ00472 serine carboxypeptida 98.7 1.1E-07 2.3E-12 80.7 9.3 107 8-117 76-218 (462)
134 PF12715 Abhydrolase_7: Abhydr 98.7 1.4E-07 3E-12 76.0 9.3 106 8-114 114-259 (390)
135 COG3545 Predicted esterase of 98.7 2.3E-07 5.1E-12 66.1 9.2 92 10-116 3-95 (181)
136 KOG2551 Phospholipase/carboxyh 98.7 2.1E-06 4.6E-11 63.6 13.9 169 9-245 5-221 (230)
137 COG4188 Predicted dienelactone 98.6 1.9E-07 4.1E-12 74.7 7.2 93 9-103 71-182 (365)
138 KOG2281 Dipeptidyl aminopeptid 98.6 5.2E-07 1.1E-11 76.4 10.1 106 9-114 642-761 (867)
139 PF08840 BAAT_C: BAAT / Acyl-C 98.6 9.5E-08 2.1E-12 72.8 5.0 49 68-117 9-58 (213)
140 PRK04940 hypothetical protein; 98.5 1.2E-06 2.7E-11 63.6 9.0 88 12-117 2-94 (180)
141 KOG2112 Lysophospholipase [Lip 98.5 7E-06 1.5E-10 60.5 12.7 106 10-115 4-128 (206)
142 PF05677 DUF818: Chlamydia CHL 98.5 2E-06 4.4E-11 68.0 10.5 102 8-114 136-253 (365)
143 COG3509 LpqC Poly(3-hydroxybut 98.5 2.5E-06 5.5E-11 66.0 10.5 107 9-115 61-179 (312)
144 COG4814 Uncharacterized protei 98.4 3.2E-06 6.9E-11 63.9 9.7 103 11-116 47-177 (288)
145 KOG2100 Dipeptidyl aminopeptid 98.4 8.4E-06 1.8E-10 73.3 13.8 106 9-116 526-645 (755)
146 COG4782 Uncharacterized protei 98.4 2.4E-06 5.2E-11 68.0 8.5 104 9-114 116-233 (377)
147 KOG3724 Negative regulator of 98.4 6.1E-06 1.3E-10 71.7 11.5 105 8-117 88-222 (973)
148 KOG3975 Uncharacterized conser 98.4 8.6E-06 1.9E-10 61.4 10.8 108 8-115 28-147 (301)
149 KOG3847 Phospholipase A2 (plat 98.4 1.6E-06 3.5E-11 67.4 7.2 107 10-117 119-277 (399)
150 PF05577 Peptidase_S28: Serine 98.4 4.4E-06 9.6E-11 71.0 10.4 109 9-117 29-150 (434)
151 PF02450 LCAT: Lecithin:choles 98.3 4E-06 8.7E-11 69.9 9.3 85 24-118 66-163 (389)
152 PF00756 Esterase: Putative es 98.3 1.8E-06 4E-11 67.7 6.7 56 62-117 96-152 (251)
153 PLN02606 palmitoyl-protein thi 98.3 5.2E-06 1.1E-10 65.2 8.9 104 9-117 26-134 (306)
154 PRK10439 enterobactin/ferric e 98.3 1E-05 2.2E-10 67.7 10.9 106 9-115 209-323 (411)
155 COG4099 Predicted peptidase [G 98.3 5.5E-06 1.2E-10 64.1 7.8 99 10-115 192-304 (387)
156 KOG4627 Kynurenine formamidase 98.2 4.2E-06 9.2E-11 61.2 5.4 102 9-115 67-172 (270)
157 COG3150 Predicted esterase [Ge 98.1 3.3E-05 7.2E-10 54.7 8.4 90 12-117 2-93 (191)
158 PLN02633 palmitoyl protein thi 98.1 4.3E-05 9.4E-10 60.2 9.9 104 8-117 24-133 (314)
159 PF02089 Palm_thioest: Palmito 98.1 9.9E-06 2.1E-10 63.1 6.0 106 10-117 6-118 (279)
160 PF11339 DUF3141: Protein of u 98.1 7.8E-05 1.7E-09 62.4 11.4 82 28-117 93-177 (581)
161 PF12048 DUF3530: Protein of u 98.0 0.0001 2.2E-09 59.5 11.6 105 11-117 89-231 (310)
162 KOG2541 Palmitoyl protein thio 98.0 0.00012 2.5E-09 56.1 10.8 101 10-117 24-130 (296)
163 cd00312 Esterase_lipase Estera 98.0 2.1E-05 4.6E-10 68.1 8.0 106 9-116 95-214 (493)
164 KOG3043 Predicted hydrolase re 98.0 9.4E-05 2E-09 55.1 9.9 102 11-114 41-153 (242)
165 KOG1551 Uncharacterized conser 97.9 3.8E-05 8.3E-10 58.5 6.3 221 10-245 114-367 (371)
166 PLN02517 phosphatidylcholine-s 97.9 4.7E-05 1E-09 65.0 6.8 86 23-117 156-265 (642)
167 KOG3101 Esterase D [General fu 97.8 8.8E-06 1.9E-10 59.8 2.1 108 10-117 45-178 (283)
168 COG2936 Predicted acyl esteras 97.8 5.3E-05 1.1E-09 64.7 6.8 109 7-116 43-160 (563)
169 KOG2369 Lecithin:cholesterol a 97.8 3E-05 6.6E-10 64.0 4.4 90 23-117 124-227 (473)
170 KOG4840 Predicted hydrolases o 97.7 0.00011 2.3E-09 54.7 5.9 101 10-115 37-144 (299)
171 COG0627 Predicted esterase [Ge 97.7 0.00022 4.9E-09 57.3 8.1 108 10-117 55-189 (316)
172 PF00450 Peptidase_S10: Serine 97.7 0.00024 5.3E-09 60.1 8.7 109 8-117 39-183 (415)
173 cd00741 Lipase Lipase. Lipase 97.7 0.00017 3.8E-09 51.9 6.7 51 63-115 9-67 (153)
174 PF04301 DUF452: Protein of un 97.7 0.00021 4.6E-09 53.8 7.1 81 9-117 11-92 (213)
175 KOG3967 Uncharacterized conser 97.6 0.00059 1.3E-08 50.5 8.8 104 10-115 102-227 (297)
176 PF05705 DUF829: Eukaryotic pr 97.5 0.00094 2E-08 52.1 9.5 102 11-117 1-114 (240)
177 PF01764 Lipase_3: Lipase (cla 97.5 0.00043 9.3E-09 49.0 6.7 40 61-102 47-86 (140)
178 PF10340 DUF2424: Protein of u 97.4 0.0021 4.7E-08 52.5 10.5 102 9-117 122-237 (374)
179 COG3946 VirJ Type IV secretory 97.4 0.00059 1.3E-08 55.5 7.2 84 10-102 261-348 (456)
180 PF00135 COesterase: Carboxyle 97.4 0.00083 1.8E-08 58.8 8.9 109 9-117 125-247 (535)
181 PF03583 LIP: Secretory lipase 97.4 0.00069 1.5E-08 54.3 7.6 88 28-115 18-113 (290)
182 KOG2182 Hydrolytic enzymes of 97.3 0.0018 3.9E-08 54.2 8.8 110 8-117 85-209 (514)
183 COG2272 PnbA Carboxylesterase 97.3 0.0015 3.2E-08 54.8 7.8 107 9-116 94-218 (491)
184 PF07082 DUF1350: Protein of u 97.2 0.0016 3.5E-08 49.8 7.2 90 23-115 34-125 (250)
185 PF06259 Abhydrolase_8: Alpha/ 97.2 0.0052 1.1E-07 45.1 9.3 108 10-117 20-146 (177)
186 KOG2183 Prolylcarboxypeptidase 97.2 0.0014 3E-08 53.6 6.7 107 10-116 81-203 (492)
187 KOG3253 Predicted alpha/beta h 97.2 0.0055 1.2E-07 52.6 10.3 96 9-115 176-286 (784)
188 COG2819 Predicted hydrolase of 97.0 0.0014 3E-08 50.8 5.2 53 63-115 119-172 (264)
189 PF11144 DUF2920: Protein of u 97.0 0.0068 1.5E-07 49.9 9.3 36 81-116 185-220 (403)
190 PF11187 DUF2974: Protein of u 97.0 0.0027 5.9E-08 48.6 6.5 37 80-116 84-124 (224)
191 cd00519 Lipase_3 Lipase (class 96.9 0.0028 6.1E-08 49.0 6.2 23 80-102 128-150 (229)
192 COG2939 Carboxypeptidase C (ca 96.9 0.0044 9.6E-08 52.1 7.5 106 9-115 101-236 (498)
193 PLN02209 serine carboxypeptida 96.9 0.0073 1.6E-07 51.2 8.9 108 9-117 68-214 (437)
194 PLN03016 sinapoylglucose-malat 96.8 0.0095 2.1E-07 50.5 8.6 109 8-117 65-212 (433)
195 KOG1202 Animal-type fatty acid 96.7 0.01 2.3E-07 55.0 8.7 97 8-116 2122-2220(2376)
196 PLN02162 triacylglycerol lipas 96.6 0.0062 1.3E-07 51.1 6.4 36 62-99 262-297 (475)
197 PF05576 Peptidase_S37: PS-10 96.6 0.0057 1.2E-07 50.2 6.0 107 8-116 62-170 (448)
198 PLN00413 triacylglycerol lipas 96.5 0.0089 1.9E-07 50.3 6.6 36 63-100 269-304 (479)
199 COG4553 DepA Poly-beta-hydroxy 96.4 0.1 2.2E-06 41.1 11.3 103 9-117 103-211 (415)
200 PF11288 DUF3089: Protein of u 96.4 0.01 2.3E-07 44.5 5.7 70 30-101 40-116 (207)
201 PF10142 PhoPQ_related: PhoPQ- 96.3 0.053 1.2E-06 44.7 9.9 153 66-247 157-323 (367)
202 PLN02571 triacylglycerol lipas 96.3 0.0067 1.5E-07 50.4 4.8 40 62-101 208-247 (413)
203 COG2382 Fes Enterochelin ester 96.3 0.012 2.5E-07 46.5 5.7 109 9-117 98-214 (299)
204 PLN02454 triacylglycerol lipas 96.3 0.0084 1.8E-07 49.8 5.0 34 66-101 214-249 (414)
205 COG1073 Hydrolases of the alph 96.2 0.14 3.1E-06 40.7 12.2 103 9-115 49-169 (299)
206 PF01083 Cutinase: Cutinase; 96.2 0.021 4.5E-07 42.3 6.6 102 11-116 7-123 (179)
207 PF05277 DUF726: Protein of un 96.1 0.025 5.3E-07 46.2 6.9 38 80-117 220-262 (345)
208 COG4947 Uncharacterized protei 96.0 0.022 4.7E-07 41.0 5.5 111 2-115 18-136 (227)
209 PLN02408 phospholipase A1 96.0 0.013 2.8E-07 48.0 4.8 40 63-102 183-222 (365)
210 KOG4372 Predicted alpha/beta h 96.0 0.0085 1.8E-07 49.1 3.7 88 10-100 81-170 (405)
211 KOG1516 Carboxylesterase and r 95.9 0.034 7.4E-07 49.0 7.5 108 9-116 112-233 (545)
212 PLN02310 triacylglycerol lipas 95.8 0.027 5.9E-07 46.7 6.0 39 62-100 189-229 (405)
213 COG1770 PtrB Protease II [Amin 95.7 0.037 7.9E-07 48.3 6.6 111 7-117 446-564 (682)
214 KOG2237 Predicted serine prote 95.7 0.013 2.8E-07 50.8 3.9 107 7-115 468-584 (712)
215 PLN02324 triacylglycerol lipas 95.7 0.021 4.6E-07 47.4 4.9 38 63-100 198-235 (415)
216 PLN02934 triacylglycerol lipas 95.7 0.021 4.5E-07 48.5 4.9 37 62-100 305-341 (515)
217 PLN02213 sinapoylglucose-malat 95.6 0.079 1.7E-06 43.2 8.1 81 37-117 2-98 (319)
218 PLN02802 triacylglycerol lipas 95.4 0.028 6E-07 47.8 4.9 39 63-101 313-351 (509)
219 PF08386 Abhydrolase_4: TAP-li 95.3 0.042 9.1E-07 36.6 4.5 50 194-244 41-94 (103)
220 PLN02753 triacylglycerol lipas 95.2 0.033 7.2E-07 47.5 4.7 38 63-100 292-332 (531)
221 PLN03037 lipase class 3 family 95.1 0.033 7.1E-07 47.5 4.5 39 63-101 299-339 (525)
222 PLN02719 triacylglycerol lipas 95.0 0.043 9.2E-07 46.8 4.7 38 64-101 279-319 (518)
223 PLN02761 lipase class 3 family 95.0 0.043 9.3E-07 46.9 4.7 38 63-100 273-314 (527)
224 PF08237 PE-PPE: PE-PPE domain 94.9 0.39 8.5E-06 36.9 9.5 82 36-117 2-91 (225)
225 PF04083 Abhydro_lipase: Parti 94.8 0.024 5.3E-07 33.8 2.1 19 8-26 42-60 (63)
226 PLN02847 triacylglycerol lipas 94.1 0.098 2.1E-06 45.5 5.0 22 80-101 251-272 (633)
227 KOG4569 Predicted lipase [Lipi 94.1 0.093 2E-06 43.1 4.7 38 62-101 155-192 (336)
228 PF09949 DUF2183: Uncharacteri 94.0 0.92 2E-05 29.9 8.4 85 23-110 11-97 (100)
229 KOG1282 Serine carboxypeptidas 93.5 0.38 8.3E-06 41.0 7.4 105 9-117 73-215 (454)
230 TIGR03712 acc_sec_asp2 accesso 93.2 0.36 7.9E-06 40.9 6.7 96 1-101 279-378 (511)
231 KOG2521 Uncharacterized conser 92.8 3.4 7.3E-05 34.1 11.4 106 11-117 40-154 (350)
232 KOG1283 Serine carboxypeptidas 92.1 0.67 1.5E-05 37.2 6.4 106 9-116 31-167 (414)
233 KOG2029 Uncharacterized conser 91.7 0.47 1E-05 41.3 5.6 59 60-118 505-575 (697)
234 PTZ00472 serine carboxypeptida 91.6 0.18 3.9E-06 43.4 3.2 33 211-244 427-459 (462)
235 PF00450 Peptidase_S10: Serine 91.4 0.15 3.2E-06 43.3 2.5 32 210-242 383-414 (415)
236 PRK12467 peptide synthase; Pro 90.8 2 4.3E-05 47.3 10.3 98 10-113 3693-3793(3956)
237 KOG2385 Uncharacterized conser 88.6 1.3 2.9E-05 37.9 5.7 41 75-117 444-489 (633)
238 KOG4540 Putative lipase essent 88.5 1.1 2.4E-05 35.3 4.9 23 80-102 276-298 (425)
239 COG5153 CVT17 Putative lipase 88.5 1.1 2.4E-05 35.3 4.9 23 80-102 276-298 (425)
240 PF06792 UPF0261: Uncharacteri 87.7 11 0.00023 31.8 10.4 100 10-112 2-127 (403)
241 cd01714 ETF_beta The electron 87.0 4.1 8.9E-05 30.8 7.2 60 31-102 71-135 (202)
242 KOG4388 Hormone-sensitive lipa 86.2 1.8 3.9E-05 37.8 5.3 101 11-116 398-509 (880)
243 COG2830 Uncharacterized protei 86.2 7.7 0.00017 28.0 7.5 79 11-117 13-92 (214)
244 PRK02399 hypothetical protein; 85.2 20 0.00044 30.2 10.7 101 10-113 4-130 (406)
245 COG1505 Serine proteases of th 83.7 0.96 2.1E-05 39.5 2.6 105 9-114 421-534 (648)
246 PF07519 Tannase: Tannase and 83.6 2.6 5.7E-05 36.5 5.3 88 28-117 52-152 (474)
247 PLN02213 sinapoylglucose-malat 81.0 2.2 4.8E-05 34.9 3.7 31 212-244 287-317 (319)
248 PF03610 EIIA-man: PTS system 80.1 16 0.00034 24.7 8.3 75 11-100 2-77 (116)
249 PF00698 Acyl_transf_1: Acyl t 80.0 1.7 3.6E-05 35.5 2.8 32 67-100 73-104 (318)
250 KOG1282 Serine carboxypeptidas 79.3 2.1 4.5E-05 36.7 3.1 31 214-244 418-448 (454)
251 smart00827 PKS_AT Acyl transfe 78.2 3 6.5E-05 33.6 3.7 30 68-99 72-101 (298)
252 PF00448 SRP54: SRP54-type pro 78.1 19 0.00042 27.0 7.8 74 27-112 74-149 (196)
253 PRK10279 hypothetical protein; 76.4 4.1 8.8E-05 33.0 3.9 33 68-102 23-55 (300)
254 cd07225 Pat_PNPLA6_PNPLA7 Pata 76.3 4 8.7E-05 33.1 3.9 63 23-101 2-64 (306)
255 PRK05579 bifunctional phosphop 76.0 48 0.001 28.2 10.7 75 9-87 116-196 (399)
256 TIGR03131 malonate_mdcH malona 75.9 3.9 8.4E-05 32.9 3.8 31 68-100 66-96 (295)
257 cd07198 Patatin Patatin-like p 75.7 4.7 0.0001 29.5 3.9 32 69-102 17-48 (172)
258 PF06309 Torsin: Torsin; Inte 75.7 16 0.00034 25.3 6.0 56 8-74 51-115 (127)
259 COG0529 CysC Adenylylsulfate k 75.1 19 0.00042 26.6 6.6 60 7-70 20-83 (197)
260 PLN02209 serine carboxypeptida 73.6 4.3 9.3E-05 34.8 3.6 30 212-243 405-434 (437)
261 COG1752 RssA Predicted esteras 73.1 4.9 0.00011 32.6 3.7 32 68-101 29-60 (306)
262 PF06850 PHB_depo_C: PHB de-po 73.1 3.4 7.3E-05 30.8 2.5 50 194-243 141-201 (202)
263 cd07227 Pat_Fungal_NTE1 Fungal 73.0 5.8 0.00013 31.6 3.9 32 68-101 28-59 (269)
264 cd07207 Pat_ExoU_VipD_like Exo 72.9 5.7 0.00012 29.6 3.8 31 70-102 19-49 (194)
265 COG1576 Uncharacterized conser 72.4 12 0.00026 26.8 4.9 58 28-99 60-117 (155)
266 COG1448 TyrB Aspartate/tyrosin 72.4 48 0.001 27.8 8.9 86 10-114 172-264 (396)
267 TIGR00128 fabD malonyl CoA-acy 72.2 5 0.00011 32.1 3.6 31 68-100 72-103 (290)
268 COG3887 Predicted signaling pr 71.0 10 0.00023 33.4 5.2 102 9-115 258-378 (655)
269 COG3340 PepE Peptidase E [Amin 70.7 20 0.00043 27.3 6.0 38 8-45 31-71 (224)
270 PLN03016 sinapoylglucose-malat 69.8 6.1 0.00013 33.9 3.6 30 214-244 402-431 (433)
271 cd07210 Pat_hypo_W_succinogene 69.6 8.1 0.00017 29.7 4.0 29 71-101 21-49 (221)
272 COG0541 Ffh Signal recognition 68.9 36 0.00079 29.1 7.7 48 62-111 198-247 (451)
273 cd07209 Pat_hypo_Ecoli_Z1214_l 68.1 8.5 0.00018 29.4 3.9 31 70-102 18-48 (215)
274 PRK13982 bifunctional SbtC-lik 67.9 84 0.0018 27.5 10.2 102 9-116 180-307 (475)
275 TIGR00521 coaBC_dfp phosphopan 67.4 59 0.0013 27.6 8.9 75 10-87 113-193 (390)
276 cd07228 Pat_NTE_like_bacteria 67.0 8.8 0.00019 28.2 3.6 30 71-102 21-50 (175)
277 TIGR01361 DAHP_synth_Bsub phos 65.5 67 0.0015 25.5 8.5 73 8-90 131-206 (260)
278 cd07230 Pat_TGL4-5_like Triacy 65.5 5 0.00011 34.2 2.3 36 68-105 91-126 (421)
279 PRK14974 cell division protein 63.7 62 0.0013 26.8 8.2 68 33-112 219-288 (336)
280 PF00326 Peptidase_S9: Prolyl 63.6 32 0.00069 25.9 6.3 63 8-74 143-208 (213)
281 PF04244 DPRP: Deoxyribodipyri 63.2 20 0.00042 27.7 4.9 48 25-85 51-98 (224)
282 cd00006 PTS_IIA_man PTS_IIA, P 63.0 46 0.00099 22.7 7.3 71 11-95 3-73 (122)
283 TIGR02816 pfaB_fam PfaB family 62.9 9.8 0.00021 33.6 3.6 32 68-101 254-286 (538)
284 TIGR01425 SRP54_euk signal rec 62.9 46 0.00099 28.6 7.4 69 31-111 177-247 (429)
285 PRK13397 3-deoxy-7-phosphohept 62.6 75 0.0016 25.1 8.2 40 8-47 121-160 (250)
286 PRK05282 (alpha)-aspartyl dipe 61.6 25 0.00055 27.3 5.3 38 8-45 30-70 (233)
287 cd07232 Pat_PLPL Patain-like p 60.9 5.8 0.00013 33.7 1.9 38 69-108 86-123 (407)
288 cd07205 Pat_PNPLA6_PNPLA7_NTE1 60.3 16 0.00036 26.6 4.0 29 71-101 21-49 (175)
289 cd07229 Pat_TGL3_like Triacylg 60.2 6.2 0.00013 33.2 1.9 37 68-106 101-137 (391)
290 COG2230 Cfa Cyclopropane fatty 59.3 29 0.00063 27.8 5.3 50 62-112 55-105 (283)
291 PF09994 DUF2235: Uncharacteri 59.1 92 0.002 24.9 9.1 91 10-101 2-113 (277)
292 cd07208 Pat_hypo_Ecoli_yjju_li 58.8 16 0.00035 28.9 4.0 31 71-103 19-50 (266)
293 KOG1200 Mitochondrial/plastidi 58.3 60 0.0013 24.6 6.4 27 19-45 21-47 (256)
294 PRK07313 phosphopantothenoylcy 58.3 42 0.00092 24.9 5.8 61 8-72 112-178 (182)
295 KOG0781 Signal recognition par 58.2 52 0.0011 28.6 6.8 87 14-112 443-539 (587)
296 PHA02114 hypothetical protein 57.7 18 0.00039 23.5 3.2 33 11-43 84-116 (127)
297 cd07212 Pat_PNPLA9 Patatin-lik 57.5 20 0.00043 29.3 4.4 20 82-101 34-53 (312)
298 PRK11613 folP dihydropteroate 57.5 77 0.0017 25.5 7.5 57 27-94 167-225 (282)
299 PF12780 AAA_8: P-loop contain 57.4 49 0.0011 26.4 6.4 64 11-88 33-98 (268)
300 PF11713 Peptidase_C80: Peptid 56.6 10 0.00022 27.4 2.3 51 42-92 59-116 (157)
301 cd07231 Pat_SDP1-like Sugar-De 56.4 9.6 0.00021 31.0 2.3 31 69-101 87-117 (323)
302 cd03818 GT1_ExpC_like This fam 56.3 21 0.00046 30.0 4.6 38 12-51 2-39 (396)
303 TIGR03709 PPK2_rel_1 polyphosp 56.3 18 0.00039 28.7 3.8 73 8-94 54-128 (264)
304 COG1073 Hydrolases of the alph 55.3 0.65 1.4E-05 36.9 -4.5 90 9-100 88-180 (299)
305 COG1087 GalE UDP-glucose 4-epi 55.0 81 0.0018 25.7 7.1 92 23-117 11-122 (329)
306 COG3727 Vsr DNA G:T-mismatch r 54.5 31 0.00066 24.0 4.1 15 28-42 100-114 (150)
307 cd05312 NAD_bind_1_malic_enz N 54.3 57 0.0012 26.1 6.2 85 11-101 26-127 (279)
308 PRK06029 3-octaprenyl-4-hydrox 54.1 90 0.002 23.3 7.0 61 9-77 115-176 (185)
309 PRK00103 rRNA large subunit me 53.7 42 0.0009 24.3 5.0 53 28-93 60-112 (157)
310 TIGR03707 PPK2_P_aer polyphosp 53.6 19 0.00041 27.9 3.4 71 9-94 30-103 (230)
311 TIGR00421 ubiX_pad polyprenyl 53.6 90 0.002 23.2 7.3 60 9-77 112-173 (181)
312 KOG1202 Animal-type fatty acid 53.5 11 0.00024 36.4 2.5 31 60-92 564-594 (2376)
313 PF09314 DUF1972: Domain of un 53.4 93 0.002 23.2 10.0 88 12-99 6-113 (185)
314 PRK14581 hmsF outer membrane N 53.4 34 0.00073 31.3 5.4 79 8-87 47-142 (672)
315 PRK09936 hypothetical protein; 52.3 46 0.00099 26.8 5.3 51 21-77 36-86 (296)
316 PF02590 SPOUT_MTase: Predicte 52.2 23 0.0005 25.5 3.5 50 30-92 62-111 (155)
317 COG0218 Predicted GTPase [Gene 50.9 22 0.00048 26.8 3.3 16 39-54 72-87 (200)
318 PF14488 DUF4434: Domain of un 50.8 46 0.00099 24.3 4.9 58 20-77 17-79 (166)
319 PF01583 APS_kinase: Adenylyls 50.7 32 0.00069 24.8 4.0 34 10-43 2-37 (156)
320 cd03146 GAT1_Peptidase_E Type 50.7 1.1E+02 0.0023 23.4 7.2 85 8-96 30-129 (212)
321 COG0159 TrpA Tryptophan syntha 50.7 66 0.0014 25.6 6.0 72 10-99 96-168 (265)
322 PF15566 Imm18: Immunity prote 50.6 22 0.00049 20.1 2.5 30 61-92 4-33 (52)
323 cd07224 Pat_like Patatin-like 50.5 27 0.00058 27.1 3.9 33 70-102 19-51 (233)
324 PRK13256 thiopurine S-methyltr 50.2 16 0.00035 28.2 2.6 29 12-45 46-74 (226)
325 PF05724 TPMT: Thiopurine S-me 50.2 17 0.00036 28.0 2.7 30 11-45 39-68 (218)
326 PF12242 Eno-Rase_NADH_b: NAD( 50.2 51 0.0011 20.5 4.2 42 59-102 17-62 (78)
327 PF03976 PPK2: Polyphosphate k 49.7 11 0.00023 29.3 1.5 72 9-95 30-104 (228)
328 PF09419 PGP_phosphatase: Mito 49.7 73 0.0016 23.4 5.8 53 32-90 36-88 (168)
329 PRK06731 flhF flagellar biosyn 49.6 1.3E+02 0.0029 24.0 8.5 75 26-112 143-220 (270)
330 PRK00771 signal recognition pa 49.4 1.8E+02 0.0038 25.3 9.8 89 9-117 94-187 (437)
331 COG4822 CbiK Cobalamin biosynt 49.2 91 0.002 23.9 6.2 59 11-86 140-200 (265)
332 cd07206 Pat_TGL3-4-5_SDP1 Tria 48.8 25 0.00053 28.5 3.5 32 67-101 87-118 (298)
333 COG4287 PqaA PhoPQ-activated p 48.4 36 0.00078 28.4 4.3 54 188-244 326-387 (507)
334 PF08484 Methyltransf_14: C-me 48.4 38 0.00083 24.5 4.2 54 60-113 49-102 (160)
335 PF10081 Abhydrolase_9: Alpha/ 47.8 44 0.00096 26.8 4.6 54 64-117 92-149 (289)
336 PF02230 Abhydrolase_2: Phosph 47.6 40 0.00087 25.6 4.5 57 9-74 155-214 (216)
337 PF08433 KTI12: Chromatin asso 47.0 75 0.0016 25.4 6.0 38 11-48 2-41 (270)
338 PTZ00445 p36-lilke protein; Pr 46.6 71 0.0015 24.5 5.4 22 24-45 30-51 (219)
339 COG3933 Transcriptional antite 46.5 1.3E+02 0.0029 25.9 7.4 71 10-95 110-180 (470)
340 COG0552 FtsY Signal recognitio 46.3 1.7E+02 0.0037 24.2 10.2 91 9-117 138-233 (340)
341 TIGR00959 ffh signal recogniti 46.1 1.8E+02 0.0039 25.1 8.4 70 30-111 176-247 (428)
342 cd07213 Pat17_PNPLA8_PNPLA9_li 46.1 81 0.0018 25.4 6.2 20 82-101 36-55 (288)
343 COG1506 DAP2 Dipeptidyl aminop 44.2 59 0.0013 29.5 5.6 42 9-50 551-595 (620)
344 COG0031 CysK Cysteine synthase 43.8 1.8E+02 0.0039 23.7 9.8 85 11-102 170-281 (300)
345 PRK05920 aromatic acid decarbo 42.7 1.5E+02 0.0033 22.6 7.0 62 8-77 129-191 (204)
346 PF00070 Pyr_redox: Pyridine n 42.3 79 0.0017 19.4 4.5 32 82-116 2-33 (80)
347 PF03205 MobB: Molybdopterin g 42.1 58 0.0013 22.9 4.3 41 11-51 1-43 (140)
348 PF13439 Glyco_transf_4: Glyco 41.2 1E+02 0.0023 21.7 5.8 88 18-112 11-109 (177)
349 PF03283 PAE: Pectinacetyleste 41.0 83 0.0018 26.4 5.6 38 80-117 156-197 (361)
350 COG4088 Predicted nucleotide k 40.8 1E+02 0.0022 23.7 5.4 38 11-48 2-44 (261)
351 cd07204 Pat_PNPLA_like Patatin 40.3 47 0.001 26.0 3.9 20 83-102 34-53 (243)
352 PLN02591 tryptophan synthase 40.2 1.9E+02 0.004 22.9 7.2 76 10-103 80-156 (250)
353 PRK14457 ribosomal RNA large s 40.1 2.1E+02 0.0045 23.9 7.7 75 12-95 260-334 (345)
354 COG0279 GmhA Phosphoheptose is 39.8 52 0.0011 24.0 3.6 73 13-91 44-120 (176)
355 PF08235 LNS2: LNS2 (Lipin/Ned 39.7 88 0.0019 22.7 4.8 56 27-97 34-94 (157)
356 PF03490 Varsurf_PPLC: Variant 39.6 31 0.00068 19.2 1.9 27 58-86 5-31 (51)
357 PRK10867 signal recognition pa 39.6 2.5E+02 0.0055 24.3 9.3 69 30-110 177-247 (433)
358 cd07218 Pat_iPLA2 Calcium-inde 39.6 50 0.0011 25.9 3.9 21 82-102 32-52 (245)
359 PRK12595 bifunctional 3-deoxy- 39.1 2.3E+02 0.0051 23.8 8.0 73 8-90 224-299 (360)
360 TIGR03127 RuMP_HxlB 6-phospho 39.1 78 0.0017 23.2 4.8 33 12-44 32-64 (179)
361 KOG1252 Cystathionine beta-syn 39.0 2.3E+02 0.0049 23.6 8.9 43 2-45 197-248 (362)
362 PF02633 Creatininase: Creatin 38.5 1.1E+02 0.0024 23.7 5.8 72 26-100 43-121 (237)
363 cd07221 Pat_PNPLA3 Patatin-lik 38.3 54 0.0012 25.9 3.9 22 81-102 33-54 (252)
364 PF03853 YjeF_N: YjeF-related 37.3 40 0.00087 24.6 2.9 34 8-41 24-57 (169)
365 PRK10115 protease 2; Provision 36.9 1.5E+02 0.0033 27.4 7.0 66 8-77 605-678 (686)
366 PRK14194 bifunctional 5,10-met 36.6 71 0.0015 26.0 4.4 45 64-112 142-190 (301)
367 COG4850 Uncharacterized conser 36.5 1.4E+02 0.0029 24.7 5.7 98 11-114 215-314 (373)
368 cd07220 Pat_PNPLA2 Patatin-lik 36.0 58 0.0013 25.6 3.8 22 81-102 37-58 (249)
369 KOG0780 Signal recognition par 36.0 2.8E+02 0.0061 23.8 7.8 69 30-110 177-247 (483)
370 COG0331 FabD (acyl-carrier-pro 35.9 44 0.00095 27.3 3.1 20 80-99 85-104 (310)
371 COG1092 Predicted SAM-dependen 35.7 1.6E+02 0.0034 25.1 6.4 18 37-54 291-308 (393)
372 PF13481 AAA_25: AAA domain; P 35.1 80 0.0017 23.3 4.3 61 23-88 127-188 (193)
373 PRK13255 thiopurine S-methyltr 35.0 49 0.0011 25.4 3.2 17 29-45 52-68 (218)
374 TIGR00246 tRNA_RlmH_YbeA rRNA 34.9 76 0.0016 22.9 3.9 53 27-94 58-110 (153)
375 PLN02735 carbamoyl-phosphate s 34.6 1.4E+02 0.003 29.4 6.7 70 27-101 599-669 (1102)
376 PF03054 tRNA_Me_trans: tRNA m 34.4 65 0.0014 26.9 3.9 51 30-85 18-68 (356)
377 cd01014 nicotinamidase_related 34.2 1.2E+02 0.0027 21.5 5.0 49 66-116 88-136 (155)
378 KOG2872 Uroporphyrinogen decar 33.9 49 0.0011 26.5 3.0 70 10-88 253-336 (359)
379 cd00401 AdoHcyase S-adenosyl-L 33.8 2.4E+02 0.0052 24.2 7.3 67 26-110 75-141 (413)
380 cd00423 Pterin_binding Pterin 33.5 1E+02 0.0023 24.3 4.9 25 25-50 152-178 (258)
381 KOG1465 Translation initiation 33.4 1.3E+02 0.0027 24.5 5.1 30 11-43 164-195 (353)
382 TIGR02113 coaC_strep phosphopa 33.2 1.4E+02 0.0031 22.0 5.3 37 8-44 111-150 (177)
383 KOG1209 1-Acyl dihydroxyaceton 33.1 1E+02 0.0022 23.8 4.4 39 6-45 3-41 (289)
384 COG2939 Carboxypeptidase C (ca 33.1 60 0.0013 28.3 3.6 30 214-244 462-491 (498)
385 cd01012 YcaC_related YcaC rela 32.8 1.8E+02 0.004 20.7 6.0 48 67-116 78-125 (157)
386 PRK07933 thymidylate kinase; V 32.8 1.1E+02 0.0023 23.4 4.7 39 12-50 2-42 (213)
387 cd07222 Pat_PNPLA4 Patatin-lik 32.4 72 0.0016 25.0 3.8 18 82-99 33-50 (246)
388 TIGR00176 mobB molybdopterin-g 32.4 83 0.0018 22.6 3.9 37 12-48 1-39 (155)
389 PF02882 THF_DHG_CYH_C: Tetrah 32.3 1.1E+02 0.0023 22.3 4.3 38 63-100 18-59 (160)
390 cd06292 PBP1_LacI_like_10 Liga 32.2 2.4E+02 0.0052 21.9 7.7 16 229-244 235-250 (273)
391 cd00382 beta_CA Carbonic anhyd 32.2 67 0.0014 21.9 3.2 31 63-95 44-74 (119)
392 TIGR03607 patatin-related prot 32.1 59 0.0013 30.2 3.6 20 80-99 66-85 (739)
393 PF00857 Isochorismatase: Isoc 32.0 1.3E+02 0.0028 21.7 5.0 49 65-115 100-148 (174)
394 PRK03846 adenylylsulfate kinas 31.9 97 0.0021 23.2 4.3 36 8-43 22-59 (198)
395 COG3946 VirJ Type IV secretory 31.9 2.4E+02 0.0053 24.2 6.7 102 12-115 51-157 (456)
396 PF01656 CbiA: CobQ/CobB/MinD/ 31.8 75 0.0016 23.3 3.8 34 12-45 1-36 (195)
397 CHL00200 trpA tryptophan synth 31.7 2E+02 0.0043 22.9 6.1 80 10-111 93-173 (263)
398 TIGR03840 TMPT_Se_Te thiopurin 31.5 56 0.0012 25.0 3.0 17 29-45 49-65 (213)
399 PRK13529 malate dehydrogenase; 31.4 1.4E+02 0.0031 26.7 5.7 84 11-100 296-403 (563)
400 PF12692 Methyltransf_17: S-ad 31.3 1E+02 0.0023 22.1 3.9 66 20-93 38-105 (160)
401 PLN03050 pyridoxine (pyridoxam 31.1 1E+02 0.0022 24.3 4.4 34 10-43 61-94 (246)
402 TIGR03586 PseI pseudaminic aci 30.8 3.1E+02 0.0067 22.7 8.5 88 8-107 133-221 (327)
403 PRK11460 putative hydrolase; P 30.8 1.8E+02 0.0038 22.4 5.7 40 9-48 148-190 (232)
404 PRK06849 hypothetical protein; 30.6 1.7E+02 0.0037 24.6 6.1 73 10-88 5-85 (389)
405 PF03796 DnaB_C: DnaB-like hel 30.6 2E+02 0.0043 22.6 6.1 72 12-86 104-177 (259)
406 PF13728 TraF: F plasmid trans 30.6 1.1E+02 0.0024 23.5 4.4 44 11-54 124-168 (215)
407 PRK13398 3-deoxy-7-phosphohept 30.4 2.8E+02 0.0061 22.1 9.2 74 8-90 133-208 (266)
408 PLN03093 Protein SENSITIVITY T 30.4 1.2E+02 0.0026 24.2 4.5 14 80-93 198-211 (273)
409 PF08197 TT_ORF2a: pORF2a trun 30.1 31 0.00067 18.6 0.9 13 38-50 36-48 (49)
410 PF01734 Patatin: Patatin-like 30.1 58 0.0013 23.6 2.9 21 80-100 27-47 (204)
411 PRK15180 Vi polysaccharide bio 30.0 1.1E+02 0.0024 26.8 4.6 78 10-89 97-198 (831)
412 PRK07877 hypothetical protein; 30.0 93 0.002 28.9 4.5 33 80-115 108-141 (722)
413 COG0859 RfaF ADP-heptose:LPS h 29.7 82 0.0018 26.0 3.9 35 9-43 175-215 (334)
414 KOG1411 Aspartate aminotransfe 29.6 1.2E+02 0.0026 25.2 4.6 86 11-114 199-291 (427)
415 PRK00889 adenylylsulfate kinas 29.6 1.3E+02 0.0027 21.9 4.5 35 10-44 4-40 (175)
416 cd01819 Patatin_and_cPLA2 Pata 29.5 1.1E+02 0.0025 21.8 4.2 19 80-98 28-46 (155)
417 PLN02752 [acyl-carrier protein 29.2 59 0.0013 26.9 3.0 18 82-99 126-143 (343)
418 COG4075 Uncharacterized conser 29.1 1.7E+02 0.0037 19.2 4.3 60 22-88 13-73 (110)
419 cd05005 SIS_PHI Hexulose-6-pho 29.1 1.6E+02 0.0036 21.5 5.1 31 13-43 36-66 (179)
420 cd01983 Fer4_NifH The Fer4_Nif 29.0 1E+02 0.0022 19.1 3.7 31 13-43 2-34 (99)
421 TIGR02813 omega_3_PfaA polyket 28.9 58 0.0013 35.1 3.4 31 67-99 663-693 (2582)
422 TIGR02069 cyanophycinase cyano 28.9 2.9E+02 0.0063 21.8 6.7 38 8-45 27-66 (250)
423 PF14253 AbiH: Bacteriophage a 28.6 33 0.00072 27.1 1.4 13 80-92 235-247 (270)
424 COG2513 PrpB PEP phosphonomuta 28.6 98 0.0021 24.9 3.9 87 24-115 25-117 (289)
425 PF01580 FtsK_SpoIIIE: FtsK/Sp 28.3 1.8E+02 0.004 21.7 5.4 63 13-75 41-115 (205)
426 cd00431 cysteine_hydrolases Cy 28.2 1.6E+02 0.0035 20.8 4.9 48 66-115 99-146 (161)
427 COG1763 MobB Molybdopterin-gua 28.2 1.3E+02 0.0029 21.8 4.3 38 11-48 3-42 (161)
428 TIGR02354 thiF_fam2 thiamine b 28.1 1.3E+02 0.0029 22.7 4.4 39 71-114 15-54 (200)
429 cd01015 CSHase N-carbamoylsarc 28.0 1.9E+02 0.0041 21.2 5.3 48 66-115 103-150 (179)
430 cd04951 GT1_WbdM_like This fam 27.9 3.3E+02 0.0071 22.0 8.5 36 12-47 3-40 (360)
431 cd07211 Pat_PNPLA8 Patatin-lik 27.8 1.2E+02 0.0025 24.7 4.4 17 83-99 44-60 (308)
432 PRK14456 ribosomal RNA large s 27.8 3.4E+02 0.0075 22.9 7.1 72 12-94 283-356 (368)
433 PRK06550 fabG 3-ketoacyl-(acyl 27.6 2.7E+02 0.0059 21.0 7.0 32 13-46 8-39 (235)
434 PF04763 DUF562: Protein of un 27.5 1.5E+02 0.0033 20.8 4.1 37 10-46 18-61 (146)
435 PRK11789 N-acetyl-anhydromuran 27.5 71 0.0015 23.8 2.8 27 61-89 132-158 (185)
436 PRK02842 light-independent pro 27.5 2.7E+02 0.0059 24.0 6.7 42 9-50 97-143 (427)
437 PRK00726 murG undecaprenyldiph 27.4 3.5E+02 0.0076 22.2 7.5 34 13-46 6-39 (357)
438 cd07217 Pat17_PNPLA8_PNPLA9_li 27.3 51 0.0011 27.4 2.3 18 83-100 44-61 (344)
439 PRK03363 fixB putative electro 27.2 2.5E+02 0.0053 23.1 6.0 60 30-101 42-103 (313)
440 PRK09072 short chain dehydroge 27.2 1.2E+02 0.0027 23.6 4.4 31 13-45 8-38 (263)
441 COG4667 Predicted esterase of 27.2 59 0.0013 25.9 2.4 40 67-109 29-69 (292)
442 PRK04148 hypothetical protein; 27.1 1.2E+02 0.0027 21.2 3.8 30 80-113 18-47 (134)
443 PF01075 Glyco_transf_9: Glyco 26.9 79 0.0017 24.4 3.2 35 9-43 105-144 (247)
444 TIGR03708 poly_P_AMP_trns poly 26.8 1E+02 0.0023 27.1 4.1 39 8-46 38-78 (493)
445 PF04084 ORC2: Origin recognit 26.7 3.3E+02 0.0072 22.5 6.8 77 13-93 57-150 (326)
446 PF10686 DUF2493: Protein of u 26.4 1.1E+02 0.0023 18.7 3.0 10 10-19 32-41 (71)
447 COG0482 TrmU Predicted tRNA(5- 26.2 1.5E+02 0.0032 24.8 4.6 59 11-77 6-64 (356)
448 cd00883 beta_CA_cladeA Carboni 26.2 1E+02 0.0022 22.9 3.5 32 64-97 67-98 (182)
449 COG1255 Uncharacterized protei 26.1 68 0.0015 21.9 2.2 22 24-45 24-45 (129)
450 cd01853 Toc34_like Toc34-like 26.1 1.2E+02 0.0027 23.8 4.1 48 36-90 78-125 (249)
451 PRK06696 uridine kinase; Valid 26.0 1.7E+02 0.0036 22.4 4.8 37 7-43 19-57 (223)
452 PF13580 SIS_2: SIS domain; PD 25.9 1.8E+02 0.004 20.2 4.6 24 80-103 36-59 (138)
453 COG0324 MiaA tRNA delta(2)-iso 25.7 3.8E+02 0.0082 22.0 7.0 78 9-88 2-101 (308)
454 PRK13768 GTPase; Provisional 25.7 3.3E+02 0.0072 21.4 6.5 34 11-44 3-38 (253)
455 cd03379 beta_CA_cladeD Carboni 25.7 1.1E+02 0.0023 21.7 3.4 29 63-93 41-69 (142)
456 PF08496 Peptidase_S49_N: Pept 25.5 1.6E+02 0.0034 21.3 4.2 48 37-93 98-145 (155)
457 PRK11889 flhF flagellar biosyn 25.5 4.5E+02 0.0097 22.8 8.3 80 21-112 304-386 (436)
458 KOG4389 Acetylcholinesterase/B 25.5 1.3E+02 0.0027 26.5 4.2 55 63-117 201-257 (601)
459 TIGR00064 ftsY signal recognit 25.5 3.5E+02 0.0076 21.6 8.1 67 34-112 152-226 (272)
460 KOG1412 Aspartate aminotransfe 25.4 1.4E+02 0.0029 24.6 4.1 43 11-54 179-228 (410)
461 TIGR02260 benz_CoA_red_B benzo 25.4 4.4E+02 0.0095 22.7 8.6 38 9-47 266-303 (413)
462 cd00762 NAD_bind_malic_enz NAD 25.3 2.4E+02 0.0053 22.3 5.5 85 12-101 27-128 (254)
463 cd01013 isochorismatase Isocho 25.2 2.2E+02 0.0048 21.4 5.3 49 66-116 131-179 (203)
464 PRK14582 pgaB outer membrane N 25.1 79 0.0017 29.0 3.1 78 8-86 47-141 (671)
465 cd04907 ACT_ThrD-I_2 Second of 25.0 1E+02 0.0023 19.2 2.9 39 2-41 32-70 (81)
466 cd07199 Pat17_PNPLA8_PNPLA9_li 25.0 1.2E+02 0.0026 23.8 3.9 18 83-100 37-54 (258)
467 PRK12724 flagellar biosynthesi 24.8 4.6E+02 0.01 22.8 8.6 74 29-112 292-368 (432)
468 PF00862 Sucrose_synth: Sucros 24.7 1.3E+02 0.0028 26.6 4.1 40 60-101 382-423 (550)
469 PRK13512 coenzyme A disulfide 24.7 2.6E+02 0.0056 24.1 6.2 42 68-114 139-180 (438)
470 PRK11609 nicotinamidase/pyrazi 24.7 2.7E+02 0.0058 21.1 5.7 48 66-115 131-178 (212)
471 COG0622 Predicted phosphoester 24.7 1.3E+02 0.0028 22.2 3.7 33 9-41 81-114 (172)
472 PF06289 FlbD: Flagellar prote 24.7 1.5E+02 0.0032 17.5 3.2 36 207-244 23-58 (60)
473 PF00484 Pro_CA: Carbonic anhy 24.6 1.9E+02 0.0041 20.5 4.6 34 62-97 39-72 (153)
474 PF13207 AAA_17: AAA domain; P 24.2 1.1E+02 0.0025 20.3 3.3 70 12-86 1-77 (121)
475 KOG2214 Predicted esterase of 24.0 38 0.00083 29.4 1.0 30 80-109 202-231 (543)
476 KOG2170 ATPase of the AAA+ sup 24.0 2.4E+02 0.0052 23.2 5.2 27 8-34 108-136 (344)
477 PF06833 MdcE: Malonate decarb 23.9 1.5E+02 0.0032 23.1 4.0 54 38-94 67-122 (234)
478 cd01126 TraG_VirD4 The TraG/Tr 23.9 1.8E+02 0.0039 24.5 5.0 28 23-50 36-63 (384)
479 cd05007 SIS_Etherase N-acetylm 23.8 1.9E+02 0.0042 22.8 4.8 39 64-103 35-73 (257)
480 PRK13111 trpA tryptophan synth 23.8 3.7E+02 0.0081 21.3 8.1 76 10-103 91-167 (258)
481 COG2185 Sbm Methylmalonyl-CoA 23.8 2.8E+02 0.006 19.8 6.4 38 7-44 10-48 (143)
482 PF09664 DUF2399: Protein of u 23.7 81 0.0018 22.7 2.5 32 8-41 40-71 (152)
483 PRK08945 putative oxoacyl-(acy 23.6 1.8E+02 0.004 22.3 4.7 34 9-45 12-45 (247)
484 PRK09273 hypothetical protein; 23.4 3.5E+02 0.0075 20.8 6.0 78 23-112 17-94 (211)
485 PRK08506 replicative DNA helic 23.1 4.3E+02 0.0094 23.2 7.2 63 21-86 285-349 (472)
486 KOG3086 Predicted dioxygenase 23.0 2.8E+02 0.006 21.9 5.2 59 59-117 17-81 (296)
487 PRK05636 replicative DNA helic 22.9 3.8E+02 0.0083 23.8 6.8 59 25-86 363-422 (505)
488 cd06583 PGRP Peptidoglycan rec 22.9 1.6E+02 0.0034 19.8 3.8 31 59-91 86-117 (126)
489 PLN03019 carbonic anhydrase 22.6 1.3E+02 0.0028 24.8 3.6 33 63-97 200-232 (330)
490 KOG1752 Glutaredoxin and relat 22.5 2.5E+02 0.0053 18.7 5.7 78 8-101 13-90 (104)
491 cd08185 Fe-ADH1 Iron-containin 22.5 4.7E+02 0.01 22.0 7.4 34 10-43 26-61 (380)
492 PHA02519 plasmid partition pro 22.3 1.7E+02 0.0037 24.8 4.5 40 11-50 108-150 (387)
493 cd00884 beta_CA_cladeB Carboni 22.2 1.4E+02 0.003 22.4 3.5 32 64-97 73-104 (190)
494 PRK13938 phosphoheptose isomer 22.1 2.6E+02 0.0057 21.0 5.1 23 80-102 46-68 (196)
495 PRK08006 replicative DNA helic 22.1 4.1E+02 0.009 23.3 6.9 63 21-86 319-383 (471)
496 PLN03006 carbonate dehydratase 22.0 1.3E+02 0.0028 24.5 3.5 31 64-96 158-188 (301)
497 PF05707 Zot: Zonular occluden 21.9 1.1E+02 0.0024 22.8 3.0 35 12-48 2-40 (193)
498 PRK07206 hypothetical protein; 21.8 4.3E+02 0.0094 22.4 7.0 32 11-46 4-35 (416)
499 PLN02662 cinnamyl-alcohol dehy 21.8 1.5E+02 0.0033 23.8 4.1 36 7-45 2-37 (322)
500 PF00290 Trp_syntA: Tryptophan 21.8 1.1E+02 0.0023 24.4 3.0 58 24-99 103-161 (259)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=234.20 Aligned_cols=233 Identities=38% Similarity=0.612 Sum_probs=174.2
Q ss_pred CcccccC--CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC
Q 045862 1 MHVAEKG--QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 1 l~y~~~g--~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
+||.+.| +||.|+++||++.++.+|+.++..|+.+||+|+++|+||+|.|+.+.....|++..++.|+..++++++.
T Consensus 34 ~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~- 112 (322)
T KOG4178|consen 34 LHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGL- 112 (322)
T ss_pred EEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhcc-
Confidence 4677777 5899999999999999999999999999999999999999999999977899999999999999999998
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC---CC-----------------CCCcchHHHHhhhhHHHHH
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP---NT-----------------SEPGEIEAEFEQISTEIVI 138 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~~~ 138 (271)
++++++||+||++||..+|..+|++|+++|+++.+... .+ +.+...+..+.....+...
T Consensus 113 -~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~ 191 (322)
T KOG4178|consen 113 -KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLV 191 (322)
T ss_pred -ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhH
Confidence 99999999999999999999999999999999977661 00 2222233334444444444
Q ss_pred HHHHhhhCCCCCCCCCCCCCCCCCCccccCCCCCCcccccccc--------cc---------------cccCCcccCC--
Q 045862 139 KEFLTLWTPDPIILPKGKGYGQPPDAIIALPGWLSDEDVNTTR--------PI---------------GTNYCDLTSV-- 193 (271)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---------------~~~~~~i~~P-- 193 (271)
..+...-.+.....+. .....+.|.+.++++.+. .+ +....++++|
T Consensus 192 ~~~~~~~~~~~~~~~~---------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~ 262 (322)
T KOG4178|consen 192 KTFRTRKTPGPLIVPK---------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVL 262 (322)
T ss_pred HhhhccccCCccccCC---------CCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceE
Confidence 4433332221111111 000002222333222222 11 2222577888
Q ss_pred --CCCcchhc-----hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 194 --CGVKEYIH-----KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 194 --~G~~D~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+|+.|.+. .+.+++.+++..+.++++|+||+++.|+|+++++.|.+|+.+.
T Consensus 263 fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 263 FIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred EEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 99999874 5677888888757788999999999999999999999999875
No 2
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.3e-34 Score=232.60 Aligned_cols=240 Identities=22% Similarity=0.288 Sum_probs=157.3
Q ss_pred CcccccCCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCC
Q 045862 1 MHVAEKGQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDE 80 (271)
Q Consensus 1 l~y~~~g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 80 (271)
++|.+.|++++|||+||++++...|..+++.|+++ |+|+++|+||||.|+.+. ..++++++++|+..+++++++ +
T Consensus 19 i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~dl~~ll~~l~~--~ 93 (295)
T PRK03592 19 MAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARYLDAWFDALGL--D 93 (295)
T ss_pred EEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC--C
Confidence 46888899999999999999999999999999997 799999999999998775 468999999999999999999 9
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCC--CCCcchHHHHhh---hh-HHHHH---HHHHhhhCCCCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT--SEPGEIEAEFEQ---IS-TEIVI---KEFLTLWTPDPII 151 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~~~~---~~-~~~~~---~~~~~~~~~~~~~ 151 (271)
+++++||||||.+|+.+|.++|++|+++|++++...+.. .........+.. .. ..... ..+...+......
T Consensus 94 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (295)
T PRK03592 94 DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSIL 173 (295)
T ss_pred CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCccc
Confidence 999999999999999999999999999999998543210 000000000000 00 00000 0000000000000
Q ss_pred CCCCCC----CCCCCCcccc---CCCCCCcccccccc--------cccccCCcccCC----CCCcchhc----h-hHHhh
Q 045862 152 LPKGKG----YGQPPDAIIA---LPGWLSDEDVNTTR--------PIGTNYCDLTSV----CGVKEYIH----K-GEFRR 207 (271)
Q Consensus 152 ~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~--------~~~~~~~~i~~P----~G~~D~~~----~-~~~~~ 207 (271)
...... +...+..... ...+.......... .....+.++++| +|++|.++ . +.+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 253 (295)
T PRK03592 174 RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRS 253 (295)
T ss_pred ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHH
Confidence 000000 0000000000 00000000000000 001112568999 99999875 2 33445
Q ss_pred hcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhhhh
Q 045862 208 DVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEKKQ 246 (271)
Q Consensus 208 ~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 246 (271)
.++++ ++++++++||++++|+|+++++.|.+|+++...
T Consensus 254 ~~~~~-~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 254 WPNQL-EITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred hhhhc-ceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 67888 999999999999999999999999999997744
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.1e-35 Score=235.42 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=157.8
Q ss_pred CcccccC-CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc-----cCcchHHhHHHHHHHHHHH
Q 045862 1 MHVAEKG-QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE-----MTSYTCFHVIGDLIGLIDL 74 (271)
Q Consensus 1 l~y~~~g-~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~~l~~~l~~ 74 (271)
++|.+.| ++|+|||+||+++++..|..+++.|+++ |+|+++|+||||.|+.+.. ...++++++++++.+++++
T Consensus 20 i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 20 IRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred EEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH
Confidence 4677888 4899999999999999999999999987 8999999999999986531 1358999999999999999
Q ss_pred hCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCC--CCCCcchH---HHHhhh----hH-HH--------
Q 045862 75 VAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPN--TSEPGEIE---AEFEQI----ST-EI-------- 136 (271)
Q Consensus 75 l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~~~~---~~~~~~----~~-~~-------- 136 (271)
++. ++++|+||||||.+++.+|.++|++|+++|++++..... ...+.... ..+... .. ..
T Consensus 99 l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (294)
T PLN02824 99 VVG--DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATP 176 (294)
T ss_pred hcC--CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCH
Confidence 999 999999999999999999999999999999999765321 11110000 000000 00 00
Q ss_pred -HHHHHHhhhCCCCCCCCCCCCCCCCCCccccCCCCCCcc--cccccc---cccccCCcccCC----CCCcchhc----h
Q 045862 137 -VIKEFLTLWTPDPIILPKGKGYGQPPDAIIALPGWLSDE--DVNTTR---PIGTNYCDLTSV----CGVKEYIH----K 202 (271)
Q Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~i~~P----~G~~D~~~----~ 202 (271)
.+..++.......... .......+......... ... .+..+. .....+.++++| +|++|.++ .
T Consensus 177 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 253 (294)
T PLN02824 177 ETVKNILCQCYHDDSAV--TDELVEAILRPGLEPGA-VDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELG 253 (294)
T ss_pred HHHHHHHHHhccChhhc--cHHHHHHHHhccCCchH-HHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHH
Confidence 0011111001110000 00000000000000000 000 000000 001123678999 99999875 5
Q ss_pred hHHhhhcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 203 GEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+.+.+..+++ ++++++++||++++|+|++|++.|.+|++++
T Consensus 254 ~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 254 RAYANFDAVE-DFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred HHHHhcCCcc-ceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 5677778888 9999999999999999999999999999763
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.3e-34 Score=233.30 Aligned_cols=241 Identities=20% Similarity=0.257 Sum_probs=158.0
Q ss_pred CcccccCC--CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC
Q 045862 1 MHVAEKGQ--GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 1 l~y~~~g~--~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
|+|.+.|+ +|+||||||++++...|..+++.|.++||+|+++|+||||.|+.+.....++++++++++.++++++++
T Consensus 36 i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~- 114 (302)
T PRK00870 36 MHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL- 114 (302)
T ss_pred EEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC-
Confidence 46777774 799999999999999999999999877899999999999999866433468999999999999999999
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCC-CCcchHHHHh--hhhHHHHHHHHHhhhCCCCCCCCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTS-EPGEIEAEFE--QISTEIVIKEFLTLWTPDPIILPKG 155 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
++++|+||||||.+|+.+|.++|++|+++|++++....... .......... .......+..+..............
T Consensus 115 -~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (302)
T PRK00870 115 -TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVR 193 (302)
T ss_pred -CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHH
Confidence 89999999999999999999999999999999975322110 0000000000 0000000111111000000000000
Q ss_pred CCCCCCCCc------cccCCCCC---C-cccccccccccccCCcccCC----CCCcchhc---hhHHhhhcCCCce---E
Q 045862 156 KGYGQPPDA------IIALPGWL---S-DEDVNTTRPIGTNYCDLTSV----CGVKEYIH---KGEFRRDVPLLEE---I 215 (271)
Q Consensus 156 ~~~~~~~~~------~~~~~~~~---~-~~~~~~~~~~~~~~~~i~~P----~G~~D~~~---~~~~~~~~~~~~~---~ 215 (271)
..+...... ........ . .............+.++++| +|++|.++ .+.+.+.++++ + +
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~ 272 (302)
T PRK00870 194 AAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGDAILQKRIPGA-AGQPH 272 (302)
T ss_pred HHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCchHHHHhhcccc-cccce
Confidence 000000000 00000000 0 00000000001123678999 99999885 36788888887 6 8
Q ss_pred EEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 216 TIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 216 ~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
++++++||++++|+|++|++.|.+|++++
T Consensus 273 ~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 273 PTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred eeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 89999999999999999999999999765
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.5e-33 Score=224.35 Aligned_cols=239 Identities=13% Similarity=0.039 Sum_probs=158.9
Q ss_pred Cccccc--CCC-ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC
Q 045862 1 MHVAEK--GQG-PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 1 l~y~~~--g~~-~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
++|... +++ ++|||+||+++++..|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++++.++++++++
T Consensus 14 ~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~~~~~~i~~l~~ 90 (276)
T TIGR02240 14 IRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR--HPYRFPGLAKLAARMLDYLDY 90 (276)
T ss_pred EEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC--CcCcHHHHHHHHHHHHHHhCc
Confidence 355543 334 79999999999999999999999885 999999999999998654 568999999999999999999
Q ss_pred CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCC--CCCCcchHHHHhhhhHHHHHHH-----HHhhhCCCCC
Q 045862 78 NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPN--TSEPGEIEAEFEQISTEIVIKE-----FLTLWTPDPI 150 (271)
Q Consensus 78 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 150 (271)
++++|+||||||.+++.+|.++|++|+++|+++++.... +..+..... . ......... ..........
T Consensus 91 --~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 165 (276)
T TIGR02240 91 --GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMM-M--ASPRRYIQPSHGIHIAPDIYGGAF 165 (276)
T ss_pred --CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHH-h--cCchhhhccccccchhhhhcccee
Confidence 899999999999999999999999999999999876431 111100000 0 000001000 0000000000
Q ss_pred CCCCCCCCCCCCCccccCCC-CCCcccccccc-cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCC
Q 045862 151 ILPKGKGYGQPPDAIIALPG-WLSDEDVNTTR-PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEG 220 (271)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~ 220 (271)
................... ........... .....+..+++| +|++|.++ .+.+.+.++++ +++++++
T Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~-~~~~i~~ 243 (276)
T TIGR02240 166 -RRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNA-ELHIIDD 243 (276)
T ss_pred -eccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCC-EEEEEcC
Confidence 0000000000000000000 00000000000 011223678999 99999875 56788899999 9999985
Q ss_pred CCccccccChHHHHHHHHHHHhhhhhhccc
Q 045862 221 VGHFINQEKGHQLETEIGTSRGEKKQGIRE 250 (271)
Q Consensus 221 ~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 250 (271)
||++++|+|++|++.|.+|+++..++...
T Consensus 244 -gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 272 (276)
T TIGR02240 244 -GHLFLITRAEAVAPIIMKFLAEERQRAVM 272 (276)
T ss_pred -CCchhhccHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999999999999988765443
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.5e-34 Score=233.64 Aligned_cols=235 Identities=15% Similarity=0.177 Sum_probs=155.4
Q ss_pred CcccccCCC------ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH
Q 045862 1 MHVAEKGQG------PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL 74 (271)
Q Consensus 1 l~y~~~g~~------~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~ 74 (271)
++|.+.|++ |+||||||++++...|.++++.|.+ +|+|+++|+||||.|+.+.. ..++++++++++.+++++
T Consensus 74 i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 74 INYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMETWAELILDFLEE 151 (360)
T ss_pred EEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHHHHHHHHHHHHH
Confidence 468888865 9999999999999999999999988 59999999999999987642 368999999999999999
Q ss_pred hCCCCCceEEEEeChhhHHHHHHHHh-hccccceEEEeecCCCCC-CCCCcchHH-----------HH-----------h
Q 045862 75 VAPNDEKMFVVGHDSGTYMACFLCLF-RANRIKALVNLSVVFNPN-TSEPGEIEA-----------EF-----------E 130 (271)
Q Consensus 75 l~~~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~-~~~~~~~~~-----------~~-----------~ 130 (271)
+++ ++++|+||||||.+++.++.+ +|++|+++|++++..... ......... .+ .
T Consensus 152 l~~--~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 152 VVQ--KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred hcC--CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 999 999999999999999998874 799999999999764321 000000000 00 0
Q ss_pred hhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCccccCCCCCCccccccccc------ccccCCcccCC----CCCcchh
Q 045862 131 QISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDAIIALPGWLSDEDVNTTRP------IGTNYCDLTSV----CGVKEYI 200 (271)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~P----~G~~D~~ 200 (271)
.......++.++.......... ...+............ ....+..+.. ....+.++++| +|++|.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~ 305 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGNKEAV--DDELVEIIRGPADDEG--ALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPF 305 (360)
T ss_pred HhcCHHHHHHHHHHhccCcccC--CHHHHHHHHhhccCCC--hHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCC
Confidence 0000011111111111110000 0000000000000000 0000000000 01123678999 9999987
Q ss_pred ch---------hHHhhhcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 201 HK---------GEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 201 ~~---------~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+. +.+.+.++++ ++++++++||++++|+|++|++.|.+||.+.
T Consensus 306 ~p~~~~~~~~~~~l~~~ip~~-~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 306 TPLDGPVGKYFSSLPSQLPNV-TLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred cCchhhHHHHHHhhhccCCce-EEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 41 2355678999 9999999999999999999999999999865
No 7
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=6.2e-33 Score=218.24 Aligned_cols=225 Identities=12% Similarity=0.072 Sum_probs=148.7
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChh
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSG 90 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~G 90 (271)
+|||+||++.+...|..+++.|++.||+|+++|+||||.|+.+.. ..++++++++|+.++++.++.. ++++|+|||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~-~~~~lvGhSmG 82 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPD-HKVILVGHSIG 82 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCC-CCEEEEecCcc
Confidence 599999999999999999999976689999999999999976542 3588999999999999999861 39999999999
Q ss_pred hHHHHHHHHhhccccceEEEeecCCCCCCCCC-cchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCC-----CCCC-CC-C
Q 045862 91 TYMACFLCLFRANRIKALVNLSVVFNPNTSEP-GEIEAEFEQISTEIVIKEFLTLWTPDPIILPKG-----KGYG-QP-P 162 (271)
Q Consensus 91 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~-~ 162 (271)
|.+++.+|.++|++|+++|++++......... ......... . ................. ..+. .. .
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG-----T-EKIWDYTFGEGPDKPPTGIMMKPEFVRHYYY 156 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc-----c-ccceeeeeccCCCCCcchhhcCHHHHHHHHh
Confidence 99999999999999999999998642100000 000000000 0 00000000000000000 0000 00 0
Q ss_pred Cccc-----cCCCCCCcc---cccccccccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCcccc
Q 045862 163 DAII-----ALPGWLSDE---DVNTTRPIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFIN 226 (271)
Q Consensus 163 ~~~~-----~~~~~~~~~---~~~~~~~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~ 226 (271)
.... ......... ...........+..+++| +|++|.++ .+.+.+.++++ ++++++++||+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~ 235 (255)
T PLN02965 157 NQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAF 235 (255)
T ss_pred cCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchh
Confidence 0000 000000000 000000001122468999 89999875 67899999999 9999999999999
Q ss_pred ccChHHHHHHHHHHHhhh
Q 045862 227 QEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 227 ~e~p~~~~~~i~~fl~~~ 244 (271)
+|+|++|++.|.+|++.+
T Consensus 236 ~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 236 FSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred hcCHHHHHHHHHHHHHHh
Confidence 999999999999999876
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.8e-33 Score=221.59 Aligned_cols=231 Identities=16% Similarity=0.180 Sum_probs=150.4
Q ss_pred CcccccCCCc-eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCC
Q 045862 1 MHVAEKGQGP-EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPND 79 (271)
Q Consensus 1 l~y~~~g~~~-~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 79 (271)
|+|.+.|+|+ +||||||+++++..|..+++.|.+. |+|+++|+||||.|+... .++++++++++. ++.+
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~----~~~~-- 73 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG---ALSLADMAEAVL----QQAP-- 73 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC---CCCHHHHHHHHH----hcCC--
Confidence 5788999886 6999999999999999999999986 999999999999997543 477777777765 3567
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCC--CCCcchHHH---Hh---hhhHHHHHHHHHhhhCCCCCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT--SEPGEIEAE---FE---QISTEIVIKEFLTLWTPDPII 151 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~ 151 (271)
++++|+||||||.+|+.+|.++|++|+++|++++...... ..+...... +. ..........++.........
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTET 153 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCch
Confidence 8999999999999999999999999999999997543211 111111111 10 001112222222111111000
Q ss_pred CCCC-CCCCCCCCccccCCCCCC-cccccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeC
Q 045862 152 LPKG-KGYGQPPDAIIALPGWLS-DEDVNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIME 219 (271)
Q Consensus 152 ~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~ 219 (271)
.... ..+....... ....... ......+. .....+.++++| +|++|.++ .+.+.+.++++ ++++++
T Consensus 154 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~-~~~~i~ 231 (256)
T PRK10349 154 ARQDARALKKTVLAL-PMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS-ESYIFA 231 (256)
T ss_pred HHHHHHHHHHHhhcc-CCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC-eEEEeC
Confidence 0000 0000000000 0000000 00000000 111233678999 99999874 45778889999 999999
Q ss_pred CCCccccccChHHHHHHHHHHHhh
Q 045862 220 GVGHFINQEKGHQLETEIGTSRGE 243 (271)
Q Consensus 220 ~~gH~~~~e~p~~~~~~i~~fl~~ 243 (271)
++||++++|+|++|++.|.+|-++
T Consensus 232 ~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 232 KAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999998653
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.9e-33 Score=221.96 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=154.0
Q ss_pred CcccccCCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCC
Q 045862 1 MHVAEKGQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDE 80 (271)
Q Consensus 1 l~y~~~g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 80 (271)
++|.+.|++|+|||+||++.++..|..+++.|.+. |+|+++|+||||.|+.+.. ..++++++++++..++++++. +
T Consensus 26 i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~--~ 101 (286)
T PRK03204 26 IHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSG-FGYQIDEHARVIGEFVDHLGL--D 101 (286)
T ss_pred EEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCc-cccCHHHHHHHHHHHHHHhCC--C
Confidence 46888888999999999999999999999999884 9999999999999987652 358899999999999999999 8
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcch-HHHHhh-hhHHHHH--HHHHhhhCCCCCCCCCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEI-EAEFEQ-ISTEIVI--KEFLTLWTPDPIILPKGK 156 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 156 (271)
+++++||||||.+++.+|..+|++|+++|++++...+........ ...... ....... ..+...+...........
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSS 181 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCH
Confidence 999999999999999999999999999999887542211100000 000000 0000010 001111111100000000
Q ss_pred ----CCCCCCCccccCCCCCC-cccccccc----cccccCC--cccCC----CCCcchhc-----hhHHhhhcCCCceEE
Q 045862 157 ----GYGQPPDAIIALPGWLS-DEDVNTTR----PIGTNYC--DLTSV----CGVKEYIH-----KGEFRRDVPLLEEIT 216 (271)
Q Consensus 157 ----~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~--~i~~P----~G~~D~~~-----~~~~~~~~~~~~~~~ 216 (271)
.+............... ...+.... .....+. .+++| +|++|.++ .+.+++.+|+. +++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~-~~~ 260 (286)
T PRK03204 182 AVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDH-VLV 260 (286)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCC-eEE
Confidence 00000000000000000 00000000 0000011 12788 99999763 46778999999 999
Q ss_pred EeCCCCccccccChHHHHHHHHHHHh
Q 045862 217 IMEGVGHFINQEKGHQLETEIGTSRG 242 (271)
Q Consensus 217 ~~~~~gH~~~~e~p~~~~~~i~~fl~ 242 (271)
+++++||++++|+|++|++.|.+|+.
T Consensus 261 ~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 261 ELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred EcCCCcccccccCHHHHHHHHHHhcC
Confidence 99999999999999999999999973
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.5e-32 Score=219.41 Aligned_cols=238 Identities=16% Similarity=0.197 Sum_probs=149.7
Q ss_pred CcccccCCCceEEEEeccCCCccchHHH---HHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC
Q 045862 1 MHVAEKGQGPEILFLYVFPELRYSWCHQ---TIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 1 l~y~~~g~~~~vlllHG~~~~~~~~~~~---~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
++|...|++|+|||+||++++...|..+ +..|.+.||+|+++|+||||.|+........+ ..+++++.+++++++.
T Consensus 22 ~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~l~~~l~~l~~ 100 (282)
T TIGR03343 22 IHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG-LVNARAVKGLMDALDI 100 (282)
T ss_pred EEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc-chhHHHHHHHHHHcCC
Confidence 4688888899999999999988888643 45566668999999999999998654211122 2578999999999999
Q ss_pred CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCC---CCC-cchHHHHhh--hhHHHHHHHHHhhhCCCCCC
Q 045862 78 NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT---SEP-GEIEAEFEQ--ISTEIVIKEFLTLWTPDPII 151 (271)
Q Consensus 78 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 151 (271)
++++++||||||.+++.+|.++|++|+++|++++...... ..+ ......+.. .........+..........
T Consensus 101 --~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 101 --EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSL 178 (282)
T ss_pred --CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCccc
Confidence 9999999999999999999999999999999997532210 000 000000000 00001111111111110000
Q ss_pred CCCC-CC-CCC-CCCccccCCCCCCcccccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEe
Q 045862 152 LPKG-KG-YGQ-PPDAIIALPGWLSDEDVNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIM 218 (271)
Q Consensus 152 ~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~ 218 (271)
.... .. .+. ...................+. .....+.++++| +|++|.++ .+.+.+.++++ +++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~-~~~~i 257 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA-QLHVF 257 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC-EEEEe
Confidence 0000 00 000 000000000000000000000 001123678999 99999874 56788899999 99999
Q ss_pred CCCCccccccChHHHHHHHHHHHh
Q 045862 219 EGVGHFINQEKGHQLETEIGTSRG 242 (271)
Q Consensus 219 ~~~gH~~~~e~p~~~~~~i~~fl~ 242 (271)
+++||+++.|+|++|++.|.+|+.
T Consensus 258 ~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 258 SRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCCcCCcccCHHHHHHHHHHHhh
Confidence 999999999999999999999986
No 11
>PLN02578 hydrolase
Probab=99.98 E-value=7.7e-32 Score=221.18 Aligned_cols=231 Identities=16% Similarity=0.155 Sum_probs=155.3
Q ss_pred CcccccCCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCC
Q 045862 1 MHVAEKGQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDE 80 (271)
Q Consensus 1 l~y~~~g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 80 (271)
++|.+.|+||+|||+||++++...|..+++.|++. |+|+++|+||||.|+.+. ..++.+.+++++.++++.+.. +
T Consensus 78 i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~~i~~~~~--~ 152 (354)
T PLN02578 78 IHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL--IEYDAMVWRDQVADFVKEVVK--E 152 (354)
T ss_pred EEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc--cccCHHHHHHHHHHHHHHhcc--C
Confidence 46888889999999999999999999999999885 999999999999998776 578999999999999999988 8
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCC-C--CCc-------chHHHHhhhhHHHHHHHHH--------
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT-S--EPG-------EIEAEFEQISTEIVIKEFL-------- 142 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~--~~~-------~~~~~~~~~~~~~~~~~~~-------- 142 (271)
+++++|||+||.+++.+|.++|++|+++|++++...... . ... .....+.. ........+.
T Consensus 153 ~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (354)
T PLN02578 153 PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVK-PLKEWFQRVVLGFLFWQA 231 (354)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhH-HHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987543211 0 000 00000000 0001111100
Q ss_pred ----------hhhCCCCCCCCCCCCCCCCCCccccCCCCCCcc---cccccc------cccccCCcccCC----CCCcch
Q 045862 143 ----------TLWTPDPIILPKGKGYGQPPDAIIALPGWLSDE---DVNTTR------PIGTNYCDLTSV----CGVKEY 199 (271)
Q Consensus 143 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~i~~P----~G~~D~ 199 (271)
.......... .....+.......... .... .+..+. .....+.++++| +|++|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~ 308 (354)
T PLN02578 232 KQPSRIESVLKSVYKDKSNV--DDYLVESITEPAADPN-AGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDP 308 (354)
T ss_pred cCHHHHHHHHHHhcCCcccC--CHHHHHHHHhcccCCc-hHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCC
Confidence 0000000000 0000000000000000 0000 000000 001112678999 999997
Q ss_pred hc----hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHHHHHh
Q 045862 200 IH----KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRG 242 (271)
Q Consensus 200 ~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 242 (271)
++ .+.+++.+++. +++++ ++||+++.|+|++|++.|.+|++
T Consensus 309 ~v~~~~~~~l~~~~p~a-~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 309 WVGPAKAEKIKAFYPDT-TLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCHHHHHHHHHhCCCC-EEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 64 56788889999 99999 58999999999999999999986
No 12
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.98 E-value=4e-32 Score=212.20 Aligned_cols=224 Identities=14% Similarity=0.107 Sum_probs=141.7
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
+|+|||+||+++++..|..+++.| + +|+|+++|+||||.|+.+. ..+++++++|+.++++++++ ++++++|||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~--~~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNI--LPYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCC--CCeEEEEEC
Confidence 689999999999999999999998 4 4999999999999998765 35899999999999999999 999999999
Q ss_pred hhhHHHHHHHHhhcc-ccceEEEeecCCCCCCCCCcchHHHHh---------hhhHHHHHHHHHhhhCCCCCCCCCCCCC
Q 045862 89 SGTYMACFLCLFRAN-RIKALVNLSVVFNPNTSEPGEIEAEFE---------QISTEIVIKEFLTLWTPDPIILPKGKGY 158 (271)
Q Consensus 89 ~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (271)
|||.+|+.+|.++|+ +|++++++++.....+. ......... .......+..++...............+
T Consensus 75 ~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (242)
T PRK11126 75 LGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNA-EERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQL 153 (242)
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCCCCCCCCH-HHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHH
Confidence 999999999999976 49999999865432110 000000000 0000111111110000000000000000
Q ss_pred CCCCCcc-c-cCCCCCCcccccccccccccCCcccCC----CCCcchhchhHHhhhcCCCceEEEeCCCCccccccChHH
Q 045862 159 GQPPDAI-I-ALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIHKGEFRRDVPLLEEITIMEGVGHFINQEKGHQ 232 (271)
Q Consensus 159 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 232 (271)
....... . .....+..............+.++++| +|++|..+.. +.+. .++ ++++++++||++++|+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~-~~~~-~~~-~~~~i~~~gH~~~~e~p~~ 230 (242)
T PRK11126 154 VAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQA-LAQQ-LAL-PLHVIPNAGHNAHRENPAA 230 (242)
T ss_pred HHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHHH-HHHH-hcC-eEEEeCCCCCchhhhChHH
Confidence 0000000 0 000000000000000001122678999 9999986542 3333 378 9999999999999999999
Q ss_pred HHHHHHHHHhh
Q 045862 233 LETEIGTSRGE 243 (271)
Q Consensus 233 ~~~~i~~fl~~ 243 (271)
+++.|.+|+.+
T Consensus 231 ~~~~i~~fl~~ 241 (242)
T PRK11126 231 FAASLAQILRL 241 (242)
T ss_pred HHHHHHHHHhh
Confidence 99999999975
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.98 E-value=3.6e-31 Score=208.38 Aligned_cols=224 Identities=13% Similarity=0.059 Sum_probs=148.4
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEe
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGh 87 (271)
++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .++++++++|+.+++++++. ++++|+||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~--~~~~lvGh 88 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQI--EKATFIGH 88 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCC--CceEEEEE
Confidence 468999999999999999999999988 4999999999999998654 58999999999999999998 89999999
Q ss_pred ChhhHHHHHHHHhhccccceEEEeecCCCCC-CCCCcchHHHHhh---h--hHHHHHHHHHhhhCCCCCCCCCCCCCCCC
Q 045862 88 DSGTYMACFLCLFRANRIKALVNLSVVFNPN-TSEPGEIEAEFEQ---I--STEIVIKEFLTLWTPDPIILPKGKGYGQP 161 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (271)
||||.+++.+|.++|++|+++|++++.+... ............. . ................... .......
T Consensus 89 S~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 165 (255)
T PRK10673 89 SMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGV---IQFLLKS 165 (255)
T ss_pred CHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHH---HHHHHhc
Confidence 9999999999999999999999998644221 0000000000000 0 0000000000000000000 0000000
Q ss_pred CCccccCCCCCCcccccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCccccccChH
Q 045862 162 PDAIIALPGWLSDEDVNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQEKGH 231 (271)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 231 (271)
+.... ...........+. ........+++| +|++|..+ .+.+.+.++++ ++++++++||++++++|+
T Consensus 166 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~ 242 (255)
T PRK10673 166 FVDGE--WRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA-RAHVIAGAGHWVHAEKPD 242 (255)
T ss_pred CCcce--eEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc-EEEEeCCCCCeeeccCHH
Confidence 00000 0000000000000 001122567889 89999764 56788888999 999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 045862 232 QLETEIGTSRGE 243 (271)
Q Consensus 232 ~~~~~i~~fl~~ 243 (271)
++++.|.+||.+
T Consensus 243 ~~~~~l~~fl~~ 254 (255)
T PRK10673 243 AVLRAIRRYLND 254 (255)
T ss_pred HHHHHHHHHHhc
Confidence 999999999975
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=4.7e-31 Score=207.61 Aligned_cols=236 Identities=16% Similarity=0.221 Sum_probs=154.4
Q ss_pred CcccccCC----CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC
Q 045862 1 MHVAEKGQ----GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 1 l~y~~~g~----~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~ 76 (271)
++|+..|. +|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|..... ..++++++++++.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhC
Confidence 57788773 58999999999999999999999987 59999999999999976542 46899999999999999999
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHH---HHhhhhHHHHHHHHHhhhCCCCCCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEA---EFEQISTEIVIKEFLTLWTPDPIILP 153 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (271)
. ++++++||||||.+++.+|.++|++|+++|++++.....+........ .+.......+................
T Consensus 79 ~--~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (257)
T TIGR03611 79 I--ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISE 156 (257)
T ss_pred C--CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhc
Confidence 8 899999999999999999999999999999999754331100000000 00000000000000000000000000
Q ss_pred CCCCCCCCCCccccCCCCCCc-ccc---cccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeC
Q 045862 154 KGKGYGQPPDAIIALPGWLSD-EDV---NTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIME 219 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~ 219 (271)
......... .......... ... .... .....+..+++| +|++|.++ .+.+.+.+++. +++.++
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~ 233 (257)
T TIGR03611 157 NAARLAADE--AHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA-QLKLLP 233 (257)
T ss_pred cchhhhhhh--hhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc-eEEEEC
Confidence 000000000 0000000000 000 0000 111223578889 99999875 46678888999 999999
Q ss_pred CCCccccccChHHHHHHHHHHHhh
Q 045862 220 GVGHFINQEKGHQLETEIGTSRGE 243 (271)
Q Consensus 220 ~~gH~~~~e~p~~~~~~i~~fl~~ 243 (271)
++||++++++|+++++.|.+||++
T Consensus 234 ~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 234 YGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999999999863
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=1e-30 Score=208.34 Aligned_cols=234 Identities=21% Similarity=0.243 Sum_probs=154.1
Q ss_pred CcccccCC--CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC
Q 045862 1 MHVAEKGQ--GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 1 l~y~~~g~--~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
++|.+.|. +|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+.. ..++++++++|+.++++++++
T Consensus 18 ~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~i~~~~~- 94 (278)
T TIGR03056 18 WHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAEDLSALCAAEGL- 94 (278)
T ss_pred EEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHHHHHHHHHHcCC-
Confidence 35677774 78999999999999999999999988 49999999999999986652 368999999999999999998
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCc----chHHHHhhhhHHHHHHHHHhhhCCCCCCC--
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPG----EIEAEFEQISTEIVIKEFLTLWTPDPIIL-- 152 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 152 (271)
++++|+||||||.+++.+|.++|++++++|++++.......... .....+.... ....+...........
T Consensus 95 -~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 170 (278)
T TIGR03056 95 -SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNP---FTPPMMSRGAADQQRVER 170 (278)
T ss_pred -CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcc---cchHHHHhhcccCcchhH
Confidence 89999999999999999999999999999999976543111000 0000000000 0000000000000000
Q ss_pred -------CCCCCCCCCCCccccCCCCCCc--ccccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCc
Q 045862 153 -------PKGKGYGQPPDAIIALPGWLSD--EDVNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLE 213 (271)
Q Consensus 153 -------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~ 213 (271)
...................... .....+. .....+.++++| +|++|.++ .+.+.+.+++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~- 249 (278)
T TIGR03056 171 LIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTA- 249 (278)
T ss_pred HhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCC-
Confidence 0000000000000000000000 0000000 001123568899 99999874 56778888999
Q ss_pred eEEEeCCCCccccccChHHHHHHHHHHHh
Q 045862 214 EITIMEGVGHFINQEKGHQLETEIGTSRG 242 (271)
Q Consensus 214 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 242 (271)
+++.++++||++++|+|+++++.|.+|++
T Consensus 250 ~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 250 TLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred eEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999999984
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=213.77 Aligned_cols=236 Identities=17% Similarity=0.201 Sum_probs=152.3
Q ss_pred CcccccCC--CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc--cCcchHHhHHHHHHHHHHHhC
Q 045862 1 MHVAEKGQ--GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE--MTSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 1 l~y~~~g~--~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~~l~~~l~~l~ 76 (271)
++|.+.|+ +|+||||||++++...|+.+++.|++ +|+|+++|+||||.|+.+.. ...++++++++++..++++++
T Consensus 117 ~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~ 195 (383)
T PLN03084 117 WFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK 195 (383)
T ss_pred EEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC
Confidence 36777774 68999999999999999999999987 59999999999999987652 135899999999999999999
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCC-CCCcchHHHHhhhhHHHHHH----HHHhhhCCCCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT-SEPGEIEAEFEQISTEIVIK----EFLTLWTPDPII 151 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 151 (271)
+ ++++|+|||+||.+++.+|.++|++|+++|+++++..... ..+..... +.......... ............
T Consensus 196 ~--~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 272 (383)
T PLN03084 196 S--DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSE-FSNFLLGEIFSQDPLRASDKALTSCGP 272 (383)
T ss_pred C--CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHH-HHHHHhhhhhhcchHHHHhhhhcccCc
Confidence 9 8999999999999999999999999999999998753211 01111110 00000000000 000000000000
Q ss_pred CCCCC-C---CCCCCCccccCCCCCCcccccccc----------cccccCCcccCC----CCCcchhc----hhHHhhhc
Q 045862 152 LPKGK-G---YGQPPDAIIALPGWLSDEDVNTTR----------PIGTNYCDLTSV----CGVKEYIH----KGEFRRDV 209 (271)
Q Consensus 152 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~ 209 (271)
..... . +...+..... .........+.+. ...+....+++| +|+.|.++ .+.+.+.
T Consensus 273 ~~~~~e~~~~~~~~~~~~~~-~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~- 350 (383)
T PLN03084 273 YAMKEDDAMVYRRPYLTSGS-SGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS- 350 (383)
T ss_pred cCCCHHHHHHHhccccCCcc-hHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-
Confidence 00000 0 0000000000 0000000000000 000111357889 99999874 3445554
Q ss_pred CCCceEEEeCCCCccccccChHHHHHHHHHHHhh
Q 045862 210 PLLEEITIMEGVGHFINQEKGHQLETEIGTSRGE 243 (271)
Q Consensus 210 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 243 (271)
++. +++++++|||++++|+|+++++.|.+|+.+
T Consensus 351 ~~a-~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 351 SQH-KLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred cCC-eEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 478 999999999999999999999999999863
No 17
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=1.8e-30 Score=216.54 Aligned_cols=240 Identities=13% Similarity=0.144 Sum_probs=151.1
Q ss_pred CcccccCC-----CceEEEEeccCCCccchHH-HHHHHhh---CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHH-H
Q 045862 1 MHVAEKGQ-----GPEILFLYVFPELRYSWCH-QTIALAS---LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLI-G 70 (271)
Q Consensus 1 l~y~~~g~-----~~~vlllHG~~~~~~~~~~-~~~~l~~---~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~-~ 70 (271)
++|...|+ +|+|||+||++++...|.. +++.|.+ ++|+|+++|+||||.|+.+.. ..++++++++++. .
T Consensus 188 l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~ytl~~~a~~l~~~ 266 (481)
T PLN03087 188 LFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SLYTLREHLEMIERS 266 (481)
T ss_pred EEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-CcCCHHHHHHHHHHH
Confidence 35666553 3799999999999999985 4566652 479999999999999987642 4589999999995 8
Q ss_pred HHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhh---------hhHHHHHHHH
Q 045862 71 LIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQ---------ISTEIVIKEF 141 (271)
Q Consensus 71 ~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 141 (271)
++++++. ++++++||||||.+++.+|.++|++|+++|+++++....+.........+.. .........|
T Consensus 267 ll~~lg~--~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 344 (481)
T PLN03087 267 VLERYKV--KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACW 344 (481)
T ss_pred HHHHcCC--CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHH
Confidence 9999999 9999999999999999999999999999999997654322110000000000 0000111111
Q ss_pred HhhhCCCCC-CC---CC----------CCCCCCCCCcc-ccCCCCCCcccccccccc----cc----cC-CcccCC----
Q 045862 142 LTLWTPDPI-IL---PK----------GKGYGQPPDAI-IALPGWLSDEDVNTTRPI----GT----NY-CDLTSV---- 193 (271)
Q Consensus 142 ~~~~~~~~~-~~---~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~----~~-~~i~~P---- 193 (271)
+........ .. .. ........... ...........+..+... .. .+ ..+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII 424 (481)
T PLN03087 345 YEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIF 424 (481)
T ss_pred HHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEE
Confidence 110000000 00 00 00000000000 000000000000000000 00 00 358899
Q ss_pred CCCcchhc----hhHHhhhcCCCceEEEeCCCCccccc-cChHHHHHHHHHHHhhh
Q 045862 194 CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQ-EKGHQLETEIGTSRGEK 244 (271)
Q Consensus 194 ~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~~ 244 (271)
+|++|.++ .+.+++.+|++ ++++++++||++++ |+|++|++.|.+|+...
T Consensus 425 ~Ge~D~ivP~~~~~~la~~iP~a-~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 425 HGGDDELIPVECSYAVKAKVPRA-RVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred EECCCCCCCHHHHHHHHHhCCCC-EEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 99999874 56788999999 99999999999985 99999999999998653
No 18
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=5.8e-31 Score=216.56 Aligned_cols=239 Identities=13% Similarity=0.077 Sum_probs=147.8
Q ss_pred CcccccCC---------CceEEEEeccCCCccchH--HHHHHH--------hhCCCeEEeeCCCCCCCCCCCccc-----
Q 045862 1 MHVAEKGQ---------GPEILFLYVFPELRYSWC--HQTIAL--------ASLSYRAVAPDLSGFGDTDELLEM----- 56 (271)
Q Consensus 1 l~y~~~g~---------~~~vlllHG~~~~~~~~~--~~~~~l--------~~~g~~vi~~D~~G~G~S~~~~~~----- 56 (271)
++|.+.|+ +|+||||||++++...|. .+.+.| .+ +|+||++|+||||.|+.+...
T Consensus 52 i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~~~~~~ 130 (360)
T PRK06489 52 LHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDGLRAAF 130 (360)
T ss_pred EEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcCCCCCC
Confidence 47888886 789999999999988886 555555 44 699999999999999865421
Q ss_pred CcchHHhHHHHHHHHH-HHhCCCCCceE-EEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHH----Hh
Q 045862 57 TSYTCFHVIGDLIGLI-DLVAPNDEKMF-VVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAE----FE 130 (271)
Q Consensus 57 ~~~~~~~~~~~l~~~l-~~l~~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~ 130 (271)
..++++++++++..++ +++++ ++++ |+||||||++|+.+|.++|++|+++|++++............... ..
T Consensus 131 ~~~~~~~~a~~~~~~l~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~ 208 (360)
T PRK06489 131 PRYDYDDMVEAQYRLVTEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIR 208 (360)
T ss_pred CcccHHHHHHHHHHHHHHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHH
Confidence 1489999999988855 88999 8885 899999999999999999999999999987542210000000000 00
Q ss_pred hh---------hHHHHHHHHHh---hhCCC-----CCCCCCCCCCCCCCCccccCCCCCCcccc-cccc-----cccccC
Q 045862 131 QI---------STEIVIKEFLT---LWTPD-----PIILPKGKGYGQPPDAIIALPGWLSDEDV-NTTR-----PIGTNY 187 (271)
Q Consensus 131 ~~---------~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~ 187 (271)
.. ........+.. .+... .............+..............+ ..+. .....+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L 288 (360)
T PRK06489 209 NDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDL 288 (360)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHH
Confidence 00 00000000000 00000 00000000000000000000000000000 0000 011123
Q ss_pred CcccCC----CCCcchhc----h--hHHhhhcCCCceEEEeCCC----CccccccChHHHHHHHHHHHhhh
Q 045862 188 CDLTSV----CGVKEYIH----K--GEFRRDVPLLEEITIMEGV----GHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 188 ~~i~~P----~G~~D~~~----~--~~~~~~~~~~~~~~~~~~~----gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
.++++| +|++|.++ . +.+.+.+|++ ++++++++ ||+++ |+|++|++.|.+||+.+
T Consensus 289 ~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a-~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 289 EKIKAPVLAINSADDERNPPETGVMEAALKRVKHG-RLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred HhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC-eEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 678999 99999774 2 5688899999 99999996 99997 89999999999999876
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=1.1e-30 Score=204.43 Aligned_cols=235 Identities=17% Similarity=0.193 Sum_probs=153.2
Q ss_pred CcccccCC---CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC
Q 045862 1 MHVAEKGQ---GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 1 l~y~~~g~---~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
++|...|+ +|+|||+||++.+...|..+++.|.+ ||+|+++|+||||.|+.+. ..++++++++++.++++.++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 57777774 47899999999999999999999986 6999999999999997654 568999999999999999998
Q ss_pred CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCC-CCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCC
Q 045862 78 NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT-SEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGK 156 (271)
Q Consensus 78 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (271)
++++++||||||.+++.+|.++|++|+++|++++...... .........+...............+...........
T Consensus 79 --~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR02427 79 --ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPA 156 (251)
T ss_pred --CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChH
Confidence 8999999999999999999999999999999987543211 0000000000000111111111111111000000000
Q ss_pred CCCCCCCccccCC-CCCCcccccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCccc
Q 045862 157 GYGQPPDAIIALP-GWLSDEDVNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFI 225 (271)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~ 225 (271)
............. ..+. .....+. .....+.++++| +|++|.++ .+.+.+.+++. +++.++++||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~ 234 (251)
T TIGR02427 157 RLDLYRNMLVRQPPDGYA-GCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGA-RFAEIRGAGHIP 234 (251)
T ss_pred HHHHHHHHHHhcCHHHHH-HHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCc-eEEEECCCCCcc
Confidence 0000000000000 0000 0000000 011122567889 99999885 45677778888 999999999999
Q ss_pred cccChHHHHHHHHHHHh
Q 045862 226 NQEKGHQLETEIGTSRG 242 (271)
Q Consensus 226 ~~e~p~~~~~~i~~fl~ 242 (271)
++++|+++++.|.+|+.
T Consensus 235 ~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 235 CVEQPEAFNAALRDFLR 251 (251)
T ss_pred cccChHHHHHHHHHHhC
Confidence 99999999999999974
No 20
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.7e-30 Score=212.57 Aligned_cols=238 Identities=12% Similarity=0.083 Sum_probs=147.8
Q ss_pred CcccccCC-CceEEEEeccCCCcc------------chHHHHH---HHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhH
Q 045862 1 MHVAEKGQ-GPEILFLYVFPELRY------------SWCHQTI---ALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHV 64 (271)
Q Consensus 1 l~y~~~g~-~~~vlllHG~~~~~~------------~~~~~~~---~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 64 (271)
|+|++.|+ ++++|||||++++.. .|..++. .|...+|+||++|+||||.|.. ..++++++
T Consensus 48 l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~----~~~~~~~~ 123 (343)
T PRK08775 48 LRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD----VPIDTADQ 123 (343)
T ss_pred EEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC----CCCCHHHH
Confidence 57888885 778888888877766 6888886 5743359999999999998842 24788999
Q ss_pred HHHHHHHHHHhCCCCCce-EEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchH--HHHhh--------hh
Q 045862 65 IGDLIGLIDLVAPNDEKM-FVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIE--AEFEQ--------IS 133 (271)
Q Consensus 65 ~~~l~~~l~~l~~~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~--~~~~~--------~~ 133 (271)
++|+.++++++++ +++ +|+||||||+||+.+|.++|++|.++|++++.....+....... ..... ..
T Consensus 124 a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (343)
T PRK08775 124 ADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKH 201 (343)
T ss_pred HHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchh
Confidence 9999999999999 775 79999999999999999999999999999986533110000000 00000 00
Q ss_pred HHHHHHH-----------HHhhhCCCCCCCCC--CCCCCCCCCcc-ccCCCCCCcccccccc----cccccCCcccCC--
Q 045862 134 TEIVIKE-----------FLTLWTPDPIILPK--GKGYGQPPDAI-IALPGWLSDEDVNTTR----PIGTNYCDLTSV-- 193 (271)
Q Consensus 134 ~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~i~~P-- 193 (271)
....... +...+......... ...+...+... ................ .....+.++++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtL 281 (343)
T PRK08775 202 GLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTV 281 (343)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeE
Confidence 0000000 00001000000000 00000000000 0000000000000000 011224678999
Q ss_pred --CCCcchhc----hhHHhhhc-CCCceEEEeCC-CCccccccChHHHHHHHHHHHhhhh
Q 045862 194 --CGVKEYIH----KGEFRRDV-PLLEEITIMEG-VGHFINQEKGHQLETEIGTSRGEKK 245 (271)
Q Consensus 194 --~G~~D~~~----~~~~~~~~-~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 245 (271)
+|++|.++ .+.+.+.+ +++ +++++++ +||++++|+|++|++.|.+||.+..
T Consensus 282 vi~G~~D~~~p~~~~~~~~~~i~p~a-~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 282 VVAVEGDRLVPLADLVELAEGLGPRG-SLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred EEEeCCCEeeCHHHHHHHHHHcCCCC-eEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 89999874 45666766 688 9999985 9999999999999999999998763
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=1.2e-29 Score=197.92 Aligned_cols=223 Identities=14% Similarity=0.138 Sum_probs=141.2
Q ss_pred CCC-ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 7 GQG-PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 7 g~~-~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
|+| |+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+... .++++++++++.+.+ . ++++++
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~--~~~~lv 70 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----P--DPAIWL 70 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----C--CCeEEE
Confidence 456 8999999999999999999999987 5999999999999987543 467778877766543 3 689999
Q ss_pred EeChhhHHHHHHHHhhccccceEEEeecCCCCCC--CCCcc----hHHHHhh---hhHHHHHHHHHhhhCCCCCCCCCC-
Q 045862 86 GHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT--SEPGE----IEAEFEQ---ISTEIVIKEFLTLWTPDPIILPKG- 155 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~- 155 (271)
||||||.+++.+|.++|+++.++|++++...... ..... ....+.. .........+..............
T Consensus 71 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (245)
T TIGR01738 71 GWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDA 150 (245)
T ss_pred EEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHH
Confidence 9999999999999999999999999987654311 11100 0000100 001111111111100000000000
Q ss_pred CCCCCCCCcc-ccCCCCCCcccccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCcc
Q 045862 156 KGYGQPPDAI-IALPGWLSDEDVNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHF 224 (271)
Q Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~ 224 (271)
..+....... ......+ ...+..+. .....+.++++| +|++|.++ .+.+.+.+++. ++++++++||+
T Consensus 151 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~ 228 (245)
T TIGR01738 151 RALKQTLLARPTPNVQVL-QAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS-ELYIFAKAAHA 228 (245)
T ss_pred HHHHHHhhccCCCCHHHH-HHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC-eEEEeCCCCCC
Confidence 0000000000 0000000 00000000 011122678899 99999874 56678889999 99999999999
Q ss_pred ccccChHHHHHHHHHHH
Q 045862 225 INQEKGHQLETEIGTSR 241 (271)
Q Consensus 225 ~~~e~p~~~~~~i~~fl 241 (271)
+++|+|++|++.|.+|+
T Consensus 229 ~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 229 PFLSHAEAFCALLVAFK 245 (245)
T ss_pred ccccCHHHHHHHHHhhC
Confidence 99999999999999986
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=5.3e-29 Score=204.29 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=144.7
Q ss_pred CceEEEEeccCCCccc-hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC----CCceE
Q 045862 9 GPEILFLYVFPELRYS-WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN----DEKMF 83 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~-~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~----~~~~~ 83 (271)
.++|||+||++++... |..++..|+++||+|+++|+||||.|+.... ...+++++++|+.++++.+... ..+++
T Consensus 87 ~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~ 165 (349)
T PLN02385 87 KAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSF 165 (349)
T ss_pred CeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHHHhccccCCCCEE
Confidence 4689999999988764 6899999998899999999999999986531 2358899999999999887541 13799
Q ss_pred EEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCC
Q 045862 84 VVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPD 163 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (271)
|+||||||.+++.++.++|++|+++|++++............ . ....+.. .....+.....+........+.
T Consensus 166 LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~--~-----~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~ 237 (349)
T PLN02385 166 LFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP--L-----VLQILIL-LANLLPKAKLVPQKDLAELAFR 237 (349)
T ss_pred EEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch--H-----HHHHHHH-HHHHCCCceecCCCcccccccc
Confidence 999999999999999999999999999998654311110000 0 0001111 0111110000000000000000
Q ss_pred cc----------ccCCCCCC-cccccccc---cccccCCcccCC----CCCcchhc----hhHHhhhc--CCCceEEEeC
Q 045862 164 AI----------IALPGWLS-DEDVNTTR---PIGTNYCDLTSV----CGVKEYIH----KGEFRRDV--PLLEEITIME 219 (271)
Q Consensus 164 ~~----------~~~~~~~~-~~~~~~~~---~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~--~~~~~~~~~~ 219 (271)
.. ........ ......+. .....+.++++| +|++|.++ .+.+.+.+ ++. ++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~-~l~~i~ 316 (349)
T PLN02385 238 DLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDK-KLKLYE 316 (349)
T ss_pred CHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCc-eEEEeC
Confidence 00 00000000 00000000 111223678999 99999885 45666666 467 999999
Q ss_pred CCCccccccChHH----HHHHHHHHHhhhh
Q 045862 220 GVGHFINQEKGHQ----LETEIGTSRGEKK 245 (271)
Q Consensus 220 ~~gH~~~~e~p~~----~~~~i~~fl~~~~ 245 (271)
++||.++.|+|++ +++.|.+||.+..
T Consensus 317 ~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 317 DAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred CCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 9999999999987 8888999998763
No 23
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=4.4e-29 Score=195.14 Aligned_cols=228 Identities=22% Similarity=0.252 Sum_probs=147.4
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHH-HHHHHHHhCCCCCceEEEEe
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGD-LIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-l~~~l~~l~~~~~~~~lvGh 87 (271)
+|+|||+||++++...|..+++.|+ +||+|+++|+||||.|+.+.....+++++++++ +..+++.++. ++++++||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~G~ 77 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI--EPFFLVGY 77 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC--CeEEEEEe
Confidence 4799999999999999999999998 479999999999999987654356789999999 7888888888 89999999
Q ss_pred ChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcc--------hHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCC
Q 045862 88 DSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGE--------IEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYG 159 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (271)
|+||.+++.+|.++|+.|.+++++++........... ....+...........+.......... .......
T Consensus 78 S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 156 (251)
T TIGR03695 78 SMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQK-NLPPEQR 156 (251)
T ss_pred ccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecc-cCChHHh
Confidence 9999999999999999999999999765331100000 000000001111111111100000000 0000000
Q ss_pred C-CCCcc-ccCCCCCCcccccccc-----cccccCCcccCC----CCCcchhc---hhHHhhhcCCCceEEEeCCCCccc
Q 045862 160 Q-PPDAI-IALPGWLSDEDVNTTR-----PIGTNYCDLTSV----CGVKEYIH---KGEFRRDVPLLEEITIMEGVGHFI 225 (271)
Q Consensus 160 ~-~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~i~~P----~G~~D~~~---~~~~~~~~~~~~~~~~~~~~gH~~ 225 (271)
. ..... ........ ..+..+. .....+..+++| +|++|... .+.+.+..++. +++.++++||++
T Consensus 157 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~ 234 (251)
T TIGR03695 157 QALRAKRLANNPEGLA-KMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLLPNL-TLVIIANAGHNI 234 (251)
T ss_pred HHHHHhcccccchHHH-HHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcCCCC-cEEEEcCCCCCc
Confidence 0 00000 00000000 0000000 000112567889 89999653 45677788889 999999999999
Q ss_pred cccChHHHHHHHHHHHh
Q 045862 226 NQEKGHQLETEIGTSRG 242 (271)
Q Consensus 226 ~~e~p~~~~~~i~~fl~ 242 (271)
++|+|+++++.|.+|+.
T Consensus 235 ~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 235 HLENPEAFAKILLAFLE 251 (251)
T ss_pred CccChHHHHHHHHHHhC
Confidence 99999999999999983
No 24
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=6.6e-28 Score=190.79 Aligned_cols=232 Identities=13% Similarity=0.067 Sum_probs=146.6
Q ss_pred cccc-CCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC-CCCC
Q 045862 3 VAEK-GQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA-PNDE 80 (271)
Q Consensus 3 y~~~-g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~ 80 (271)
|.+. +++|+|||+||++.+...|..++..|.++||+|+++|+||||.|..... ..++++++++++.++++++. . +
T Consensus 11 ~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~~l~~~--~ 87 (273)
T PLN02211 11 DMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLSSLPEN--E 87 (273)
T ss_pred cccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHHhcCCC--C
Confidence 4444 4578999999999999999999999988799999999999998854431 34799999999999999985 4 7
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhh----hCCCCCCCCCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTL----WTPDPIILPKGK 156 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 156 (271)
+++|+||||||.+++.++.++|++|+++|++++...... ......... .... +..+... +...........
T Consensus 88 ~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g--~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 162 (273)
T PLN02211 88 KVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLG--FQTDEDMKD--GVPD-LSEFGDVYELGFGLGPDQPPTSA 162 (273)
T ss_pred CEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCC--CCHHHHHhc--cccc-hhhhccceeeeeccCCCCCCcee
Confidence 999999999999999999999999999999987543210 000000000 0000 0000000 000000000000
Q ss_pred CC-----CCC-CCcccc-----CCCCCCcccccccccccc--cCCcc-cCC----CCCcchhc----hhHHhhhcCCCce
Q 045862 157 GY-----GQP-PDAIIA-----LPGWLSDEDVNTTRPIGT--NYCDL-TSV----CGVKEYIH----KGEFRRDVPLLEE 214 (271)
Q Consensus 157 ~~-----~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~i-~~P----~G~~D~~~----~~~~~~~~~~~~~ 214 (271)
.+ ... +..... ............+..... ....+ ++| .|++|..+ .+.+.+.+++. +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~ 241 (273)
T PLN02211 163 IIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-Q 241 (273)
T ss_pred eeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-E
Confidence 00 000 000000 000000000000000000 01223 678 89999875 67788888999 9
Q ss_pred EEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 215 ITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 215 ~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
++.++ +||.+++++|+++++.|.++....
T Consensus 242 ~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 242 VYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred EEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 99996 899999999999999999886643
No 25
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=1.5e-28 Score=197.16 Aligned_cols=232 Identities=16% Similarity=0.201 Sum_probs=149.5
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
++|+||++|||+++...|+.++..|.++ |++|+++|++|+|.++..+....|+..++++.+..++..... .+++|+|
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~--~~~~lvg 134 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFV--EPVSLVG 134 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcC--cceEEEE
Confidence 5789999999999999999999999876 599999999999955444433459999999999999999988 8899999
Q ss_pred eChhhHHHHHHHHhhccccceEE---EeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCC-----------C
Q 045862 87 HDSGTYMACFLCLFRANRIKALV---NLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPII-----------L 152 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 152 (271)
||+||.+|+.+|+.+|+.|+++| +++++....+.........+.. .....+.+.......... .
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 212 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDK--FLSALELLIPLSLTEPVRLVSEGLLRCLKV 212 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhh--hccHhhhcCccccccchhheeHhhhcceee
Confidence 99999999999999999999999 4444443321111111111110 000000000000000000 0
Q ss_pred --CCCCC-CCCCCCccccC-CCCCCcc-cccccc--cc-----cccCCccc-CC----CCCcchhc----hhHHhhhcCC
Q 045862 153 --PKGKG-YGQPPDAIIAL-PGWLSDE-DVNTTR--PI-----GTNYCDLT-SV----CGVKEYIH----KGEFRRDVPL 211 (271)
Q Consensus 153 --~~~~~-~~~~~~~~~~~-~~~~~~~-~~~~~~--~~-----~~~~~~i~-~P----~G~~D~~~----~~~~~~~~~~ 211 (271)
..... ........... ....... .+..+. .. .....++. +| +|+.|.+. +..+.+.+|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn 292 (326)
T KOG1454|consen 213 VYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPN 292 (326)
T ss_pred eccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCC
Confidence 00000 00000000000 0000000 000000 00 01114455 88 99999884 6678888899
Q ss_pred CceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 212 LEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 212 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+ ++++++++||.+|+|.|+++++.|..|++..
T Consensus 293 ~-~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 293 A-ELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred c-eEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 9 9999999999999999999999999999876
No 26
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=5e-29 Score=192.85 Aligned_cols=107 Identities=21% Similarity=0.183 Sum_probs=96.1
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc--cCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE--MTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
.++++|||||+|.+...|-...+.|++ .++|+++|++|+|.|+.+.- ........+++-|+++....++ ++.+|+
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L--~Kmilv 165 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGL--EKMILV 165 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCC--cceeEe
Confidence 368999999999999999999999999 49999999999999998761 1233456889999999999999 999999
Q ss_pred EeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 86 GHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
|||+||++|..+|.+||++|++|||++|...+
T Consensus 166 GHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALKYPERVEKLILVSPWGFP 197 (365)
T ss_pred eccchHHHHHHHHHhChHhhceEEEecccccc
Confidence 99999999999999999999999999986655
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=2.2e-28 Score=195.44 Aligned_cols=229 Identities=12% Similarity=0.100 Sum_probs=142.5
Q ss_pred CceEEEEeccCCCccc-hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccC-cchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 9 GPEILFLYVFPELRYS-WCHQTIALASLSYRAVAPDLSGFGDTDELLEMT-SYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~-~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
+++|||+||+++++.. |..+...|.+.||+|+++|+||||.|..+.... .++++.+++++..++++++. ++++++|
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~liG 102 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGL--DKFYLLG 102 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCC--CcEEEEE
Confidence 5799999998766654 556666666658999999999999998654211 37899999999999999998 8899999
Q ss_pred eChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhh--hH------------------HHHHHHHHhhhC
Q 045862 87 HDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQI--ST------------------EIVIKEFLTLWT 146 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~------------------~~~~~~~~~~~~ 146 (271)
|||||.+++.+|.++|++|.++|++++...... ............ .. ...+..+.....
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLDSAPE-YVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLL 181 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccccchH-HHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhh
Confidence 999999999999999999999999987543210 000000000000 00 000111100000
Q ss_pred CCCCCCCCC-CCCCCCCC-----ccccCCCCCCcccccccccccccCCcccCC----CCCcchhc---hhHHhhhcCCCc
Q 045862 147 PDPIILPKG-KGYGQPPD-----AIIALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH---KGEFRRDVPLLE 213 (271)
Q Consensus 147 ~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~---~~~~~~~~~~~~ 213 (271)
......+.. ........ .............+..+ .....+..+++| +|++|.+. .+.+.+.+++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~- 259 (288)
T TIGR01250 182 CRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDW-DITDKLSEIKVPTLLTVGEFDTMTPEAAREMQELIAGS- 259 (288)
T ss_pred cccccchHHHHHHhhccCHHHHhcccCCcccccccccccc-CHHHHhhccCCCEEEEecCCCccCHHHHHHHHHhccCC-
Confidence 000000000 00000000 00000000000000000 111122568899 89999763 56677888999
Q ss_pred eEEEeCCCCccccccChHHHHHHHHHHHh
Q 045862 214 EITIMEGVGHFINQEKGHQLETEIGTSRG 242 (271)
Q Consensus 214 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 242 (271)
++++++++||++++|+|+++++.|.+|++
T Consensus 260 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 260 RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999984
No 28
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=5.8e-29 Score=203.52 Aligned_cols=239 Identities=11% Similarity=0.070 Sum_probs=141.9
Q ss_pred CcccccCC----C-ceEEEEeccCCCccchHHHH---HHHhhCCCeEEeeCCCCCCCCCCCccc-CcchHHh-----HHH
Q 045862 1 MHVAEKGQ----G-PEILFLYVFPELRYSWCHQT---IALASLSYRAVAPDLSGFGDTDELLEM-TSYTCFH-----VIG 66 (271)
Q Consensus 1 l~y~~~g~----~-~~vlllHG~~~~~~~~~~~~---~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~-----~~~ 66 (271)
|+|.+.|+ + |+||++||++++...|..++ +.|...+|+||++|+||||.|+.+... ..++++. +++
T Consensus 28 l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 107 (339)
T PRK07581 28 LAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYD 107 (339)
T ss_pred EEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHH
Confidence 46777774 3 45666666776776776554 467544699999999999999865421 1344443 566
Q ss_pred HHHH----HHHHhCCCCCc-eEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHH-H---H--------
Q 045862 67 DLIG----LIDLVAPNDEK-MFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEA-E---F-------- 129 (271)
Q Consensus 67 ~l~~----~l~~l~~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~---~-------- 129 (271)
|+.. +++++++ ++ ++||||||||++|+.+|.++|++|+++|++++.....+. ...... . +
T Consensus 108 ~~~~~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 184 (339)
T PRK07581 108 NVRAQHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPH-NFVFLEGLKAALTADPAFNG 184 (339)
T ss_pred HHHHHHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHH-HHHHHHHHHHHHHhCCCCCC
Confidence 6665 7788999 89 589999999999999999999999999999876542110 000000 0 0
Q ss_pred ------hhhhHHHHHHHHH-----hhhCCCCCCCCCC----CC-----CCCCCCccccCCCCCC---cc-cccccc----
Q 045862 130 ------EQISTEIVIKEFL-----TLWTPDPIILPKG----KG-----YGQPPDAIIALPGWLS---DE-DVNTTR---- 181 (271)
Q Consensus 130 ------~~~~~~~~~~~~~-----~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~---~~-~~~~~~---- 181 (271)
...........+. ..+.......... .. +........ ...... .. ......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~ 263 (339)
T PRK07581 185 GWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRD-PNNLLAMLWTWQRGDISRNPAY 263 (339)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccC-cccHHHHHHHhhhcccccCccc
Confidence 0000000000000 0000000000000 00 000000000 000000 00 000000
Q ss_pred --cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCC-CCccccccChHHHHHHHHHHHhhh
Q 045862 182 --PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEG-VGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 182 --~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
.....+.++++| +|++|.++ .+.+.+.++++ +++++++ +||++++|+|++++..|.+||++.
T Consensus 264 ~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a-~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 264 GGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNA-ELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC-eEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 001122578999 99999774 56778889999 9999999 999999999999999999999875
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=99.96 E-value=2.5e-27 Score=192.82 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=97.1
Q ss_pred CcccccC---CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCccc----CcchHHhHHHHHHHHHH
Q 045862 1 MHVAEKG---QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEM----TSYTCFHVIGDLIGLID 73 (271)
Q Consensus 1 l~y~~~g---~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~l~~~l~ 73 (271)
++|...+ .+++|||+||++.+...|..++..|.++||+|+++|+||||.|+.+... ..++++++++|+..+++
T Consensus 43 l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~ 122 (330)
T PRK10749 43 IRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQ 122 (330)
T ss_pred EEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHH
Confidence 3566554 3478999999999999999999989888999999999999999754311 12588999999999998
Q ss_pred Hh----CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 74 LV----APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 74 ~l----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
++ +. .+++++||||||.+++.+|.++|++|+++|+++|...
T Consensus 123 ~~~~~~~~--~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 123 QEIQPGPY--RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred HHHhcCCC--CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 86 55 7899999999999999999999999999999987653
No 30
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=2.2e-28 Score=188.42 Aligned_cols=212 Identities=24% Similarity=0.305 Sum_probs=140.1
Q ss_pred EEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhh
Q 045862 12 ILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGT 91 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg 91 (271)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.......++++++++|+.+++++++. ++++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI--KKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT--SSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc--cccccccccccc
Confidence 7999999999999999999996 5899999999999999876643468999999999999999999 899999999999
Q ss_pred HHHHHHHHhhccccceEEEeecCCCCCCCCCcch-HHHHhh------hhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCc
Q 045862 92 YMACFLCLFRANRIKALVNLSVVFNPNTSEPGEI-EAEFEQ------ISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDA 164 (271)
Q Consensus 92 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (271)
.+++.++.++|++|+++|+++++........... ...+.. ..........+........ .......
T Consensus 78 ~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 150 (228)
T PF12697_consen 78 MIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDE-------PEDLIRS 150 (228)
T ss_dssp HHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH-------HHHHHHH
T ss_pred ccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccc-------ccccccc
Confidence 9999999999999999999998874310000000 000000 0000011111110000000 0000000
Q ss_pred c-ccCCCCCCcccccccccccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCccccccChHHHHH
Q 045862 165 I-IALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLET 235 (271)
Q Consensus 165 ~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 235 (271)
. ......+... .........+..+++| +|++|.++ .+.+.+.++++ ++++++++||++++|+|++|++
T Consensus 151 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 151 SRRALAEYLRSN--LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNA-ELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTE-EEEEETTSSSTHHHHSHHHHHH
T ss_pred cccccccccccc--cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCC-EEEEECCCCCccHHHCHHHHhc
Confidence 0 0000000000 0000111222567888 89999885 56777788999 9999999999999999999987
Q ss_pred H
Q 045862 236 E 236 (271)
Q Consensus 236 ~ 236 (271)
+
T Consensus 228 a 228 (228)
T PF12697_consen 228 A 228 (228)
T ss_dssp H
T ss_pred C
Confidence 4
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=3.2e-28 Score=201.82 Aligned_cols=234 Identities=16% Similarity=0.202 Sum_probs=151.1
Q ss_pred cccccCC--CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCC
Q 045862 2 HVAEKGQ--GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPND 79 (271)
Q Consensus 2 ~y~~~g~--~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 79 (271)
+|...|+ +++|||+||++++...|..+...|.+. |+|+++|+||||.|.... ...+++++++++..+++.++.
T Consensus 122 ~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~~~~~~~~~-- 196 (371)
T PRK14875 122 RYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV--GAGSLDELAAAVLAFLDALGI-- 196 (371)
T ss_pred EEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHHHHHHhcCC--
Confidence 4566663 689999999999999999999999885 999999999999996554 467899999999999999998
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCC--C
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGK--G 157 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 157 (271)
.+++|+|||+||.+++.+|.++|+++.++|++++...... ........+........+..++.............. .
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPE-INGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVED 275 (371)
T ss_pred ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcc-cchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHH
Confidence 8999999999999999999999999999999987643211 111111111111111111222222111110000000 0
Q ss_pred CCCCCCccccCCCCCCc---cccccc---ccccccCCcccCC----CCCcchhchhHHhh-hcCCCceEEEeCCCCcccc
Q 045862 158 YGQPPDAIIALPGWLSD---EDVNTT---RPIGTNYCDLTSV----CGVKEYIHKGEFRR-DVPLLEEITIMEGVGHFIN 226 (271)
Q Consensus 158 ~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~i~~P----~G~~D~~~~~~~~~-~~~~~~~~~~~~~~gH~~~ 226 (271)
....... ......+.. ..+... ......+..+++| +|++|.++.....+ ...+. ++.+++++||+++
T Consensus 276 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~~~~-~~~~~~~~gH~~~ 353 (371)
T PRK14875 276 LLKYKRL-DGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPDGV-AVHVLPGAGHMPQ 353 (371)
T ss_pred HHHHhcc-ccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhccCCC-eEEEeCCCCCChh
Confidence 0000000 000000000 000000 0000112567899 99999887533333 34456 9999999999999
Q ss_pred ccChHHHHHHHHHHHhh
Q 045862 227 QEKGHQLETEIGTSRGE 243 (271)
Q Consensus 227 ~e~p~~~~~~i~~fl~~ 243 (271)
+++|+++++.|.+|+.+
T Consensus 354 ~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 354 MEAAADVNRLLAEFLGK 370 (371)
T ss_pred hhCHHHHHHHHHHHhcc
Confidence 99999999999999975
No 32
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=1.8e-27 Score=189.48 Aligned_cols=220 Identities=14% Similarity=0.116 Sum_probs=139.4
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh----CCCCCceEE
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----APNDEKMFV 84 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~~l 84 (271)
.+.|+++||+++++..|..+++.|.++||+|+++|+||||.|+... ....++.++++|+...++.+ .. .+++|
T Consensus 25 ~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d~~~~l~~~~~~~~~--~~~~l 101 (276)
T PHA02857 25 KALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRDVVQHVVTIKSTYPG--VPVFL 101 (276)
T ss_pred CEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHHHHHHHHHHHhhCCC--CCEEE
Confidence 3467777999999999999999999889999999999999997543 12345666777777777654 33 58999
Q ss_pred EEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHH-HhhhCCCCCCCCCCCC-CCCCC
Q 045862 85 VGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEF-LTLWTPDPIILPKGKG-YGQPP 162 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 162 (271)
+||||||.+|+.+|.++|++++++|++++...... . .....+... ...+............ +....
T Consensus 102 vG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (276)
T PHA02857 102 LGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA--V----------PRLNLLAAKLMGIFYPNKIVGKLCPESVSRDM 169 (276)
T ss_pred EEcCchHHHHHHHHHhCccccceEEEecccccccc--c----------cHHHHHHHHHHHHhCCCCccCCCCHhhccCCH
Confidence 99999999999999999999999999998653210 0 000111111 1111111000000000 00000
Q ss_pred -------CccccCCCCCCcccccccc----cccccCCcccCC----CCCcchhc----hhHHhhhc-CCCceEEEeCCCC
Q 045862 163 -------DAIIALPGWLSDEDVNTTR----PIGTNYCDLTSV----CGVKEYIH----KGEFRRDV-PLLEEITIMEGVG 222 (271)
Q Consensus 163 -------~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~-~~~~~~~~~~~~g 222 (271)
................... .....+.++++| +|++|.++ .+.+.+.+ ++. ++.+++++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~-~~~~~~~~g 248 (276)
T PHA02857 170 DEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNR-EIKIYEGAK 248 (276)
T ss_pred HHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCc-eEEEeCCCc
Confidence 0000000000000000000 011223678999 99999885 45666665 467 999999999
Q ss_pred ccccccCh---HHHHHHHHHHHhhh
Q 045862 223 HFINQEKG---HQLETEIGTSRGEK 244 (271)
Q Consensus 223 H~~~~e~p---~~~~~~i~~fl~~~ 244 (271)
|+++.|++ +++.+.+.+||.+.
T Consensus 249 H~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 249 HHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred ccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999876 57889999999875
No 33
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=3.7e-27 Score=192.24 Aligned_cols=226 Identities=15% Similarity=0.174 Sum_probs=140.7
Q ss_pred CceEEEEeccCCCc-cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC----CCceE
Q 045862 9 GPEILFLYVFPELR-YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN----DEKMF 83 (271)
Q Consensus 9 ~~~vlllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~----~~~~~ 83 (271)
+++|||+||++.+. ..|..+...|+++||+|+++|+||||.|+.... ...+++.+++|+..+++.+... +.+++
T Consensus 59 ~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 59 RALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred ceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 34699999998664 457778888998899999999999999975432 2457889999999999987531 13799
Q ss_pred EEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCC
Q 045862 84 VVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPD 163 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (271)
|+||||||.+++.++.++|++|+++|++++............ .. ......+..+..... .............
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 209 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW--PI--PQILTFVARFLPTLA----IVPTADLLEKSVK 209 (330)
T ss_pred EEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch--HH--HHHHHHHHHHCCCCc----cccCCCccccccc
Confidence 999999999999999999999999999998654321110000 00 001111112111110 0000000000000
Q ss_pred cc-----cc-CCCCCCc-c---cccccc----cccccCCcccCC----CCCcchhc----hhHHhhhcC--CCceEEEeC
Q 045862 164 AI-----IA-LPGWLSD-E---DVNTTR----PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVP--LLEEITIME 219 (271)
Q Consensus 164 ~~-----~~-~~~~~~~-~---~~~~~~----~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~--~~~~~~~~~ 219 (271)
.. .. ....+.. . .+.... .....+..+++| +|++|.++ .+.+.+.++ +. ++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~-~l~~~~ 288 (330)
T PLN02298 210 VPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDK-TIKIYD 288 (330)
T ss_pred CHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCc-eEEEcC
Confidence 00 00 0000000 0 000000 011223678899 99999885 455655554 67 999999
Q ss_pred CCCccccccChHH----HHHHHHHHHhhh
Q 045862 220 GVGHFINQEKGHQ----LETEIGTSRGEK 244 (271)
Q Consensus 220 ~~gH~~~~e~p~~----~~~~i~~fl~~~ 244 (271)
++||.+++++|+. +.+.|.+||...
T Consensus 289 ~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 289 GMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred CcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999988864 666778888876
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=7.6e-27 Score=193.85 Aligned_cols=107 Identities=18% Similarity=0.195 Sum_probs=90.4
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCccc-C--cchHHhHHHHHHHHHHHhCCCCCceEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEM-T--SYTCFHVIGDLIGLIDLVAPNDEKMFV 84 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~--~~~~~~~~~~l~~~l~~l~~~~~~~~l 84 (271)
++|+|||+||++++...|...+..|++. |+|+++|+||||.|+.+... . ....+.+++++.++++.+++ ++++|
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~--~~~~l 180 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNL--SNFIL 180 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCC--CCeEE
Confidence 4689999999999999999999999885 99999999999999765411 0 11123467788889998998 89999
Q ss_pred EEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 85 VGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+||||||.+|+.+|.++|++|+++|++++....
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 999999999999999999999999999976543
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.95 E-value=7.7e-28 Score=197.50 Aligned_cols=115 Identities=19% Similarity=0.184 Sum_probs=94.1
Q ss_pred CcccccCC-----CceEEEEeccCCCcc-----------chHHHHH---HHhhCCCeEEeeCCCC--CCCCCCCc-----
Q 045862 1 MHVAEKGQ-----GPEILFLYVFPELRY-----------SWCHQTI---ALASLSYRAVAPDLSG--FGDTDELL----- 54 (271)
Q Consensus 1 l~y~~~g~-----~~~vlllHG~~~~~~-----------~~~~~~~---~l~~~g~~vi~~D~~G--~G~S~~~~----- 54 (271)
|+|.++|. +++|||+||++++.. .|..++. .|..++|+|+++|+|| ||.|....
T Consensus 18 ~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~ 97 (351)
T TIGR01392 18 VAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGG 97 (351)
T ss_pred EEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCC
Confidence 46888773 579999999999763 4787762 5544579999999999 56554311
Q ss_pred -----ccCcchHHhHHHHHHHHHHHhCCCCCc-eEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 55 -----EMTSYTCFHVIGDLIGLIDLVAPNDEK-MFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 55 -----~~~~~~~~~~~~~l~~~l~~l~~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+...++++++++++..+++++++ ++ ++|+||||||++++.+|.++|++|+++|++++....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 98 RPYGSDFPLITIRDDVKAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CcCCCCCCCCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 01258999999999999999999 88 999999999999999999999999999999987643
No 36
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=1.4e-27 Score=225.53 Aligned_cols=240 Identities=19% Similarity=0.222 Sum_probs=153.8
Q ss_pred cccccCC---CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc------cCcchHHhHHHHHHHHH
Q 045862 2 HVAEKGQ---GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE------MTSYTCFHVIGDLIGLI 72 (271)
Q Consensus 2 ~y~~~g~---~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~l~~~l 72 (271)
+|.+.|+ +++|||+||++++...|..++..|.+. |+|+++|+||||.|+.... ...++++.+++++..++
T Consensus 1361 ~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll 1439 (1655)
T PLN02980 1361 KVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLI 1439 (1655)
T ss_pred EEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHH
Confidence 4555664 589999999999999999999999885 9999999999999975431 13578999999999999
Q ss_pred HHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHH-----HHHHHHhhhCC
Q 045862 73 DLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEI-----VIKEFLTLWTP 147 (271)
Q Consensus 73 ~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 147 (271)
++++. ++++|+||||||.+++.+|.++|++|+++|++++................. ..... ....+...+..
T Consensus 1440 ~~l~~--~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~ 1516 (1655)
T PLN02980 1440 EHITP--GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKD-DSRARMLIDHGLEIFLENWYS 1516 (1655)
T ss_pred HHhCC--CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhh-hHHHHHHHhhhHHHHHHHhcc
Confidence 99998 899999999999999999999999999999998654321100000000000 00000 01111111111
Q ss_pred CCCC--CCCCCCCCCCCCccccCCCCCC-cccccccc-----cccccCCcccCC----CCCcchhc---hhHHhhhcCC-
Q 045862 148 DPII--LPKGKGYGQPPDAIIALPGWLS-DEDVNTTR-----PIGTNYCDLTSV----CGVKEYIH---KGEFRRDVPL- 211 (271)
Q Consensus 148 ~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~i~~P----~G~~D~~~---~~~~~~~~~~- 211 (271)
.... ......+............... ...+..+. .....+.++++| +|++|.+. .+.+.+.+++
T Consensus 1517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1517 GELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMYREIGKS 1596 (1655)
T ss_pred HHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHHHHcccc
Confidence 0000 0000000000000000000000 00000000 001123678999 99999774 3556666665
Q ss_pred -----------CceEEEeCCCCccccccChHHHHHHHHHHHhhhhh
Q 045862 212 -----------LEEITIMEGVGHFINQEKGHQLETEIGTSRGEKKQ 246 (271)
Q Consensus 212 -----------~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 246 (271)
+ ++++++++||++++|+|++|++.|.+||.+...
T Consensus 1597 ~~~~~~~~~~~a-~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1597 KESGNDKGKEII-EIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred ccccccccccce-EEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 4 899999999999999999999999999998754
No 37
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=4.9e-27 Score=194.19 Aligned_cols=114 Identities=12% Similarity=0.134 Sum_probs=92.7
Q ss_pred CcccccCC-----CceEEEEeccCCCccc-------------hHHHHH---HH-hhCCCeEEeeCCCCC-CCCCCCcc--
Q 045862 1 MHVAEKGQ-----GPEILFLYVFPELRYS-------------WCHQTI---AL-ASLSYRAVAPDLSGF-GDTDELLE-- 55 (271)
Q Consensus 1 l~y~~~g~-----~~~vlllHG~~~~~~~-------------~~~~~~---~l-~~~g~~vi~~D~~G~-G~S~~~~~-- 55 (271)
++|...|+ +|+|||+||++++... |..++. .| .+ +|+||++|++|+ |.|+.+..
T Consensus 35 ~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~Dl~G~~~~s~~~~~~~ 113 (379)
T PRK00175 35 LAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTD-RYFVICSNVLGGCKGSTGPSSIN 113 (379)
T ss_pred EEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCcc-ceEEEeccCCCCCCCCCCCCCCC
Confidence 46788774 5899999999999875 666652 33 44 699999999983 54533220
Q ss_pred ----------cCcchHHhHHHHHHHHHHHhCCCCCc-eEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 56 ----------MTSYTCFHVIGDLIGLIDLVAPNDEK-MFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 56 ----------~~~~~~~~~~~~l~~~l~~l~~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
...++++++++++.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 184 (379)
T PRK00175 114 PDTGKPYGSDFPVITIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARL 184 (379)
T ss_pred CCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCccc
Confidence 0158999999999999999999 88 599999999999999999999999999999976643
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.93 E-value=1.1e-25 Score=181.60 Aligned_cols=113 Identities=18% Similarity=0.207 Sum_probs=94.6
Q ss_pred CcccccCC--CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC
Q 045862 1 MHVAEKGQ--GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 1 l~y~~~g~--~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
|+|.+.|+ +++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.....++.+++++|+..+++++++
T Consensus 17 l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~- 94 (306)
T TIGR01249 17 LYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGI- 94 (306)
T ss_pred EEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC-
Confidence 46777775 78999999998776543 344455445799999999999999865432356788999999999999999
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
++++++||||||.+++.++.++|++|+++|++++...
T Consensus 95 -~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 95 -KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred -CCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 8999999999999999999999999999999987653
No 39
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.93 E-value=9.7e-26 Score=160.86 Aligned_cols=228 Identities=11% Similarity=0.060 Sum_probs=153.7
Q ss_pred CcccccCCCc-eEEEEeccCC-CccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcc-cCcchHHhHHHHHHHHHHHhC
Q 045862 1 MHVAEKGQGP-EILFLYVFPE-LRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLE-MTSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 1 l~y~~~g~~~-~vlllHG~~~-~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~l~~~l~~l~ 76 (271)
|+|..+|.|| .|++++|..+ ...+|.+.+..|.+. -++++++|.||||.|.++.. ....-+..-+++...++++|.
T Consensus 33 l~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk 112 (277)
T KOG2984|consen 33 LGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALK 112 (277)
T ss_pred eeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhC
Confidence 5789999987 7999999865 456799988887654 38999999999999988872 122244556677778899999
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGK 156 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (271)
. +++.++|||-||..|+.+|+++++.|.++|++++...... ...+.-...+ -..+|...............
T Consensus 113 ~--~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~------~~~ma~kgiR-dv~kWs~r~R~P~e~~Yg~e 183 (277)
T KOG2984|consen 113 L--EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNH------LGAMAFKGIR-DVNKWSARGRQPYEDHYGPE 183 (277)
T ss_pred C--CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecc------hhHHHHhchH-HHhhhhhhhcchHHHhcCHH
Confidence 9 9999999999999999999999999999999998654311 0000000111 11112111110000000000
Q ss_pred CCCCCCCccccCCCCCCc-ccccccc---cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCcc
Q 045862 157 GYGQPPDAIIALPGWLSD-EDVNTTR---PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHF 224 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~ 224 (271)
.+. .....|... ..+..+. .+...+.+++|| +|..|+++ .-.+..+.+.+ ++.+++.++|.
T Consensus 184 ~f~------~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~peGkHn 256 (277)
T KOG2984|consen 184 TFR------TQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIHPEGKHN 256 (277)
T ss_pred HHH------HHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEccCCCcc
Confidence 000 000000000 0000000 223334789999 99999997 45678888899 99999999999
Q ss_pred ccccChHHHHHHHHHHHhhh
Q 045862 225 INQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 225 ~~~e~p~~~~~~i~~fl~~~ 244 (271)
+++..+++|+..+.+|+++.
T Consensus 257 ~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 257 FHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred eeeechHHHHHHHHHHHhcc
Confidence 99999999999999999864
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.93 E-value=5.2e-25 Score=192.97 Aligned_cols=111 Identities=25% Similarity=0.399 Sum_probs=92.3
Q ss_pred CcccccCC--CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC
Q 045862 1 MHVAEKGQ--GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 1 l~y~~~g~--~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
|+|...|+ +|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+.....++++++++|+..++++++..
T Consensus 15 l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~ 93 (582)
T PRK05855 15 LAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLAD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPD 93 (582)
T ss_pred EEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCC
Confidence 45777774 68999999999999999999999965 7999999999999998765435689999999999999999872
Q ss_pred CCceEEEEeChhhHHHHHHHHh--hccccceEEEeec
Q 045862 79 DEKMFVVGHDSGTYMACFLCLF--RANRIKALVNLSV 113 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~ 113 (271)
++++|+||||||.+++.++.+ .++++..++.+++
T Consensus 94 -~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 94 -RPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred -CcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 349999999999999988876 2455665655554
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=1.1e-24 Score=179.76 Aligned_cols=226 Identities=12% Similarity=0.122 Sum_probs=140.5
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC--CCceEEEEe
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN--DEKMFVVGH 87 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~~~~lvGh 87 (271)
++|||+||++++...|..+++.|+++||+|+++|+||||.|+.... ...+++.+++|+..+++.+... +.+++++||
T Consensus 137 ~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGh 215 (395)
T PLN02652 137 GILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGH 215 (395)
T ss_pred eEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 5899999999999999999999998899999999999999986542 2357888899999999887531 137999999
Q ss_pred ChhhHHHHHHHHhhcc---ccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCC-----CCC-CC
Q 045862 88 DSGTYMACFLCLFRAN---RIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILP-----KGK-GY 158 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~ 158 (271)
||||.+++.++. +|+ +++++|+.+|.....+. ..... ............+........ ... ..
T Consensus 216 SmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~--~~~~~-----~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~ 287 (395)
T PLN02652 216 STGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA--HPIVG-----AVAPIFSLVAPRFQFKGANKRGIPVSRDPAAL 287 (395)
T ss_pred CHHHHHHHHHHh-ccCcccccceEEEECcccccccc--hHHHH-----HHHHHHHHhCCCCcccCcccccCCcCCCHHHH
Confidence 999999998764 564 79999999876532110 00000 011111111111100000000 000 00
Q ss_pred CCCCCccccCCCCCCcccccccc----cccccCCcccCC----CCCcchhc----hhHHhhhcC--CCceEEEeCCCCcc
Q 045862 159 GQPPDAIIALPGWLSDEDVNTTR----PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVP--LLEEITIMEGVGHF 224 (271)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~--~~~~~~~~~~~gH~ 224 (271)
............+.......... .....+.++++| +|++|.++ .+.+.+.++ +. +++++++++|.
T Consensus 288 ~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k-~l~~~~ga~H~ 366 (395)
T PLN02652 288 LAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHK-DIKLYDGFLHD 366 (395)
T ss_pred HHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCc-eEEEECCCeEE
Confidence 00000000000000000000000 011233678999 99999886 444544444 35 89999999999
Q ss_pred cccc-ChHHHHHHHHHHHhhhh
Q 045862 225 INQE-KGHQLETEIGTSRGEKK 245 (271)
Q Consensus 225 ~~~e-~p~~~~~~i~~fl~~~~ 245 (271)
++.| +++++.+.+.+||...-
T Consensus 367 l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 367 LLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred eccCCCHHHHHHHHHHHHHHHh
Confidence 9777 79999999999998763
No 42
>PLN02511 hydrolase
Probab=99.93 E-value=5.4e-25 Score=182.11 Aligned_cols=251 Identities=12% Similarity=0.137 Sum_probs=149.9
Q ss_pred CCceEEEEeccCCCccc-h-HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC--CCCceE
Q 045862 8 QGPEILFLYVFPELRYS-W-CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP--NDEKMF 83 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~-~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~~~ 83 (271)
++|+|||+||+++++.. | ..++..+.++||+|+++|+||||.|.... ..+....+++|+.+++++++. ++.+++
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--PQFYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--cCEEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 46889999999877654 4 56777777779999999999999997543 233345777888888887753 114799
Q ss_pred EEEeChhhHHHHHHHHhhccc--cceEEEeecCCCCC---CCCCcchHHHHhhhhHHHHHHHHHhh---hCCC-C--C--
Q 045862 84 VVGHDSGTYMACFLCLFRANR--IKALVNLSVVFNPN---TSEPGEIEAEFEQISTEIVIKEFLTL---WTPD-P--I-- 150 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~--~-- 150 (271)
++||||||.+++.++.++|++ |.++++++++.... ............. .....++..... .... . .
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~-~~~~~l~~~~~~~~~~~~~~~~~~~~ 255 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDK-ALAKALRKIFAKHALLFEGLGGEYNI 255 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHH-HHHHHHHHHHHHHHHHHhhCCCccCH
Confidence 999999999999999999987 88888887655320 0000000000000 000001111110 0000 0 0
Q ss_pred -CCCCCCC---CCCCCCccccCCCCCCcccccccccccccCCcccCC----CCCcchhch-----hHHhhhcCCCceEEE
Q 045862 151 -ILPKGKG---YGQPPDAIIALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIHK-----GEFRRDVPLLEEITI 217 (271)
Q Consensus 151 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~~-----~~~~~~~~~~~~~~~ 217 (271)
....... +.+.+... ........+.-........+.++++| +|++|+++. ..+.+..+++ ++++
T Consensus 256 ~~~~~~~~~~~fd~~~t~~--~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~-~l~~ 332 (388)
T PLN02511 256 PLVANAKTVRDFDDGLTRV--SFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNC-LLIV 332 (388)
T ss_pred HHHHhCCCHHHHHHhhhhh--cCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCE-EEEE
Confidence 0000000 00000000 00000000000000122334779999 999998852 3356678999 9999
Q ss_pred eCCCCccccccChHH------HHHHHHHHHhhhhhhcccCCCCCCccCcccccccC
Q 045862 218 MEGVGHFINQEKGHQ------LETEIGTSRGEKKQGIREKPKQPHKENQGEVAARH 267 (271)
Q Consensus 218 ~~~~gH~~~~e~p~~------~~~~i~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (271)
++++||+.++|+|+. +++.+.+|+....... ...|.+...+|+.-|+
T Consensus 333 ~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~---~~~~~~~~~~~~~~~~ 385 (388)
T PLN02511 333 TPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEGK---SSTPAFNSSDEQVGRS 385 (388)
T ss_pred CCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHhc---cccccccccccccCcc
Confidence 999999999999976 5899999999886543 3345566666555444
No 43
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.92 E-value=1.8e-23 Score=166.32 Aligned_cols=227 Identities=15% Similarity=0.096 Sum_probs=144.8
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC--CCCceEEEEe
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP--NDEKMFVVGH 87 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~~~lvGh 87 (271)
.+||++||++.+..-|..++..|..+||.|+++|+||||.|........-++.++.+|+..+++.... .+.+++|+||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 58999999999999999999999999999999999999999732111344689999999999988752 2368999999
Q ss_pred ChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCC--C-CCCCCC----
Q 045862 88 DSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILP--K-GKGYGQ---- 160 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~---- 160 (271)
||||.|++.++.+++.+|+++||++|...... ...................+.-.... . ......
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~ 186 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGG--------AILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRD 186 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCCh--------hHHHHHHHHHhcccccccccccccCcccccCcCcchhhcC
Confidence 99999999999999999999999999875521 00010111111111111111100000 0 000000
Q ss_pred -----CC-CccccCCCCCCcccccccc---c--ccccCCcccCC----CCCcchhch--hHHh-----hhcCCCceEEEe
Q 045862 161 -----PP-DAIIALPGWLSDEDVNTTR---P--IGTNYCDLTSV----CGVKEYIHK--GEFR-----RDVPLLEEITIM 218 (271)
Q Consensus 161 -----~~-~~~~~~~~~~~~~~~~~~~---~--~~~~~~~i~~P----~G~~D~~~~--~~~~-----~~~~~~~~~~~~ 218 (271)
.+ ..............+..+. . .......+++| +|++|.++. +... ...++. +++++
T Consensus 187 ~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~-~~~~~ 265 (298)
T COG2267 187 PAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDK-ELKVI 265 (298)
T ss_pred HHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCc-eEEec
Confidence 00 0000000000000000000 1 11112567888 999998875 4444 233566 89999
Q ss_pred CCCCcccccc-Ch--HHHHHHHHHHHhhhh
Q 045862 219 EGVGHFINQE-KG--HQLETEIGTSRGEKK 245 (271)
Q Consensus 219 ~~~gH~~~~e-~p--~~~~~~i~~fl~~~~ 245 (271)
+|+.|.++.| +. +++.+.+.+|+.+..
T Consensus 266 ~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 266 PGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred CCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 9999998877 45 788999999998763
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=9.1e-25 Score=158.45 Aligned_cols=215 Identities=18% Similarity=0.130 Sum_probs=141.4
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh---CCCCCceEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV---APNDEKMFV 84 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~l 84 (271)
.+..||||||+.++..+.+.+.+.|+++||+|++|.+||||...... -..+.++|.+++.+..+.| +- +.+.+
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~v~d~Y~~L~~~gy--~eI~v 89 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF--LKTTPRDWWEDVEDGYRDLKEAGY--DEIAV 89 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH--hcCCHHHHHHHHHHHHHHHHHcCC--CeEEE
Confidence 34899999999999999999999999999999999999999775443 5678889988888877766 45 78999
Q ss_pred EEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCC-CCCCCCC
Q 045862 85 VGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGK-GYGQPPD 163 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 163 (271)
+|-||||.+++.+|.++| ++++|.++++.... .....+..++.++........... .+.+.+.
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k--------------~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~ 153 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVK--------------SWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMK 153 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccc--------------cchhhhHHHHHHHHHhhhccCCCHHHHHHHHH
Confidence 999999999999999998 89999999887541 011111111111100000000000 0000000
Q ss_pred ccccCCCCCCcccccccc-cccccCCcccCC----CCCcchhc----hhHHhhhc-CCCceEEEeCCCCcccccc-ChHH
Q 045862 164 AIIALPGWLSDEDVNTTR-PIGTNYCDLTSV----CGVKEYIH----KGEFRRDV-PLLEEITIMEGVGHFINQE-KGHQ 232 (271)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~-~~~~~~~~~~~~gH~~~~e-~p~~ 232 (271)
..... .+..-..+..+. ....++..|..| .|.+|.++ ++.+...+ ++.+++.+++++||.+-.+ ..++
T Consensus 154 ~~~~~-~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~ 232 (243)
T COG1647 154 SYKDT-PMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQ 232 (243)
T ss_pred Hhhcc-hHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHH
Confidence 00000 000000111111 222333567788 89999885 44454444 3445999999999988664 7799
Q ss_pred HHHHHHHHHhh
Q 045862 233 LETEIGTSRGE 243 (271)
Q Consensus 233 ~~~~i~~fl~~ 243 (271)
+.+.+..||++
T Consensus 233 v~e~V~~FL~~ 243 (243)
T COG1647 233 VEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHhhC
Confidence 99999999973
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=8e-24 Score=163.72 Aligned_cols=224 Identities=15% Similarity=0.199 Sum_probs=146.4
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC----CCCCce
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA----PNDEKM 82 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~----~~~~~~ 82 (271)
+.|+++++||+.++...|+.+...|+.. +-+|+++|.|.||.|.... .++.+.+++|+..+++..+ . .++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~--~~~ 125 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRL--DPV 125 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHccccccc--CCc
Confidence 5799999999999999999999999876 7899999999999998766 5779999999999999884 4 789
Q ss_pred EEEEeChhh-HHHHHHHHhhccccceEEEeecCCCCCCCCCcchHH---H--------------------HhhhhHHHHH
Q 045862 83 FVVGHDSGT-YMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEA---E--------------------FEQISTEIVI 138 (271)
Q Consensus 83 ~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~---~--------------------~~~~~~~~~~ 138 (271)
.|+|||||| .+++..+..+|+.+..+|+++-++...+........ . +........+
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~ 205 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLV 205 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHH
Confidence 999999999 888888888999999999999655331111111110 0 0001111111
Q ss_pred HHHHhhhCCCCCCCCCCCC--CCCCCCccccCCCCCCcccccccccccccCCcccCC----CCCcchhc----hhHHhhh
Q 045862 139 KEFLTLWTPDPIILPKGKG--YGQPPDAIIALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH----KGEFRRD 208 (271)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~----~~~~~~~ 208 (271)
..|+...... ...... +.-.+.. ....+.......+ ...+.......| .|.++..+ -..+.+.
T Consensus 206 ~~fi~~nl~~---~~~~~s~~w~~nl~~---i~~~~~~~~~~s~-~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~ 278 (315)
T KOG2382|consen 206 RQFILTNLKK---SPSDGSFLWRVNLDS---IASLLDEYEILSY-WADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKI 278 (315)
T ss_pred HHHHHHhcCc---CCCCCceEEEeCHHH---HHHHHHHHHhhcc-cccccccccccceeEEecCCCCCcChhHHHHHHHh
Confidence 1222221111 000000 0000000 0000000000000 001101334455 66666553 4578888
Q ss_pred cCCCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 209 VPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 209 ~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+|+. ++..++++||++|.|+|++|.+.|.+|+...
T Consensus 279 fp~~-e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 279 FPNV-EVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred ccch-heeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999 9999999999999999999999999998764
No 46
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.91 E-value=1.3e-23 Score=160.05 Aligned_cols=224 Identities=17% Similarity=0.171 Sum_probs=146.8
Q ss_pred eEEEEeccCCCc-cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC----CCCceEEE
Q 045862 11 EILFLYVFPELR-YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP----NDEKMFVV 85 (271)
Q Consensus 11 ~vlllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~----~~~~~~lv 85 (271)
.|+++||++..+ ..|..++..|+..||-|+++|++|||.|+.... .--+++..++|+.+..+.... .+-+..|.
T Consensus 56 lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~ 134 (313)
T KOG1455|consen 56 LVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDLVVDDVISFFDSIKEREENKGLPRFLF 134 (313)
T ss_pred EEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHHHHHHHHHHHHHHhhccccCCCCeeee
Confidence 699999999876 778999999999999999999999999996552 334788899999888876421 12479999
Q ss_pred EeChhhHHHHHHHHhhccccceEEEeecCCCCCCCC-CcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCc
Q 045862 86 GHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSE-PGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDA 164 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (271)
||||||.|++.++.+.|+..+++|+++|.....+.. +.... ..+...+..+.+.-...+.........+.
T Consensus 135 GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v---------~~~l~~l~~liP~wk~vp~~d~~~~~~kd 205 (313)
T KOG1455|consen 135 GESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPV---------ISILTLLSKLIPTWKIVPTKDIIDVAFKD 205 (313)
T ss_pred ecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHH---------HHHHHHHHHhCCceeecCCccccccccCC
Confidence 999999999999999999999999999988764322 11111 11112222223322212222111111111
Q ss_pred ccc------CCCCCC----c----ccccccccccccCCcccCC----CCCcchhc----hhHHhhhcCCC-ceEEEeCCC
Q 045862 165 IIA------LPGWLS----D----EDVNTTRPIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLL-EEITIMEGV 221 (271)
Q Consensus 165 ~~~------~~~~~~----~----~~~~~~~~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~-~~~~~~~~~ 221 (271)
... .+-.+. . +.++.-..-..++.++++| ||++|.++ ++.+.+..+.. +++.++||.
T Consensus 206 p~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm 285 (313)
T KOG1455|consen 206 PEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGM 285 (313)
T ss_pred HHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccH
Confidence 100 000000 0 0000000122333789999 99999885 66666665433 489999999
Q ss_pred Cccccc----cChHHHHHHHHHHHhhh
Q 045862 222 GHFINQ----EKGHQLETEIGTSRGEK 244 (271)
Q Consensus 222 gH~~~~----e~p~~~~~~i~~fl~~~ 244 (271)
-|.++. |+-+.+...|.+||.+.
T Consensus 286 ~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 286 WHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 998874 45577888888998764
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.90 E-value=7.3e-23 Score=162.19 Aligned_cols=221 Identities=13% Similarity=0.104 Sum_probs=129.5
Q ss_pred CCceEEEEeccCC----CccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-----CCC
Q 045862 8 QGPEILFLYVFPE----LRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV-----APN 78 (271)
Q Consensus 8 ~~~~vlllHG~~~----~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l-----~~~ 78 (271)
++++||++||++. +...|..+++.|+++||+|+++|+||||.|.... .+++++.+|+.+.++.+ +.
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~~~~d~~~~~~~l~~~~~g~- 99 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEGIDADIAAAIDAFREAAPHL- 99 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHhhCCCC-
Confidence 3568899998763 3445778889999999999999999999987432 46677888888888776 45
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCc-chHHHHhhhhHHHHHHHHHhhhCCCCCCCCC-CC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPG-EIEAEFEQISTEIVIKEFLTLWTPDPIILPK-GK 156 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 156 (271)
++++++||||||.+++.+|.. +++|+++|++++.......... .....+...... ..++............ ..
T Consensus 100 -~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~ 174 (274)
T TIGR03100 100 -RRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLS---ADFWRKLLSGEVNLGSSLR 174 (274)
T ss_pred -CcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhC---hHHHHHhcCCCccHHHHHH
Confidence 679999999999999999864 5689999999987543111000 000000000000 0010111111000000 00
Q ss_pred CCCCCCCccccCCCCCCcccccccc-cccccCCcccCC----CCCcchhch---------hHHhhhc--CCCceEEEeCC
Q 045862 157 GYGQPPDAIIALPGWLSDEDVNTTR-PIGTNYCDLTSV----CGVKEYIHK---------GEFRRDV--PLLEEITIMEG 220 (271)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~P----~G~~D~~~~---------~~~~~~~--~~~~~~~~~~~ 220 (271)
.+...+.... ....... ..... .-...+..+++| +|..|.... ..+.+.+ ++. ++..+++
T Consensus 175 ~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v-~~~~~~~ 250 (274)
T TIGR03100 175 GLGDALLKAR-QKGDEVA--HGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGI-ERVEIDG 250 (274)
T ss_pred HHHHHHHhhh-hcCCCcc--cchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCe-EEEecCC
Confidence 0000000000 0000000 00000 000111456888 999997742 2333434 777 9999999
Q ss_pred CCcccccc-ChHHHHHHHHHHHh
Q 045862 221 VGHFINQE-KGHQLETEIGTSRG 242 (271)
Q Consensus 221 ~gH~~~~e-~p~~~~~~i~~fl~ 242 (271)
++|++..+ .++++.+.|.+||+
T Consensus 251 ~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 251 ADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred CCcccccHHHHHHHHHHHHHHHh
Confidence 99999655 55999999999996
No 48
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.88 E-value=3.6e-22 Score=149.72 Aligned_cols=105 Identities=25% Similarity=0.275 Sum_probs=89.1
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-CCCCCceEEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV-APNDEKMFVV 85 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~lv 85 (271)
+||.++++||.+.+...|..++..|... ..+++++|+||||+|..... .+.+.+.++.|+.++++.+ +....+++||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 5899999999999999999999998764 46888999999999976553 5799999999999999876 2212689999
Q ss_pred EeChhhHHHHHHHHh--hccccceEEEeecC
Q 045862 86 GHDSGTYMACFLCLF--RANRIKALVNLSVV 114 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 114 (271)
||||||.||...|.. -|. +.++++++..
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 999999999988865 355 8999999964
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.88 E-value=1.1e-21 Score=159.43 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=134.3
Q ss_pred CceEEEEeccCCCcc-ch-------------------------HHHHHHHhhCCCeEEeeCCCCCCCCCCCccc--Ccch
Q 045862 9 GPEILFLYVFPELRY-SW-------------------------CHQTIALASLSYRAVAPDLSGFGDTDELLEM--TSYT 60 (271)
Q Consensus 9 ~~~vlllHG~~~~~~-~~-------------------------~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--~~~~ 60 (271)
.-+|+++||++.+.. .| ..+++.|.++||+|+++|+||||.|...... ...+
T Consensus 21 kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~ 100 (332)
T TIGR01607 21 IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINC 100 (332)
T ss_pred eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchhh
Confidence 348999999998875 11 4689999999999999999999999854311 1247
Q ss_pred HHhHHHHHHHHHHHhCC---------------------C-CCceEEEEeChhhHHHHHHHHhhcc--------ccceEEE
Q 045862 61 CFHVIGDLIGLIDLVAP---------------------N-DEKMFVVGHDSGTYMACFLCLFRAN--------RIKALVN 110 (271)
Q Consensus 61 ~~~~~~~l~~~l~~l~~---------------------~-~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl 110 (271)
++++++|+..+++.... + +.|++|+||||||.+++.++.++++ .++++|+
T Consensus 101 ~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~ 180 (332)
T TIGR01607 101 FDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCIS 180 (332)
T ss_pred HHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEE
Confidence 89999999999876421 0 2579999999999999999876643 5889998
Q ss_pred eecCCCCCC-CCC--cchHHHHhhhhHHHHHHHHHhhhCCCC-CCCCCCCCCCCCCCccc-cCCCCCCccccccccc---
Q 045862 111 LSVVFNPNT-SEP--GEIEAEFEQISTEIVIKEFLTLWTPDP-IILPKGKGYGQPPDAII-ALPGWLSDEDVNTTRP--- 182 (271)
Q Consensus 111 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 182 (271)
+++...... ... ....... ......+..+...+.... ..........+...... ......+...+..+..
T Consensus 181 ~s~~~~i~~~~~~~~~~~~~~~--~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~ 258 (332)
T TIGR01607 181 LSGMISIKSVGSDDSFKFKYFY--LPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATD 258 (332)
T ss_pred eccceEEecccCCCcchhhhhH--HHHHHHHHHHCCcccccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHH
Confidence 888653210 000 0000000 001111111211111100 00001000111110000 0000111111111110
Q ss_pred -ccccCCcc--cCC----CCCcchhc----hhHHhhhc--CCCceEEEeCCCCccccccC-hHHHHHHHHHHHh
Q 045862 183 -IGTNYCDL--TSV----CGVKEYIH----KGEFRRDV--PLLEEITIMEGVGHFINQEK-GHQLETEIGTSRG 242 (271)
Q Consensus 183 -~~~~~~~i--~~P----~G~~D~~~----~~~~~~~~--~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 242 (271)
.......+ ++| +|++|.++ ...+.+.. ++. +++++++++|.++.|. ++++.+.|.+||.
T Consensus 259 ~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~-~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 259 TLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNK-ELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCc-EEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 01122334 678 99999875 33444333 466 8999999999999885 7899999999985
No 50
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=3.9e-22 Score=163.98 Aligned_cols=115 Identities=14% Similarity=0.127 Sum_probs=90.3
Q ss_pred CcccccCC-----CceEEEEeccCCCccc-------------hHHHHH---HHhhCCCeEEeeCCCCCCCCCCC------
Q 045862 1 MHVAEKGQ-----GPEILFLYVFPELRYS-------------WCHQTI---ALASLSYRAVAPDLSGFGDTDEL------ 53 (271)
Q Consensus 1 l~y~~~g~-----~~~vlllHG~~~~~~~-------------~~~~~~---~l~~~g~~vi~~D~~G~G~S~~~------ 53 (271)
|+|+.+|. .+.||++|++.+++.. |..++- .|-..-|.||++|..|-|.|+.+
T Consensus 43 ~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tg 122 (389)
T PRK06765 43 MGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTG 122 (389)
T ss_pred EEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCC
Confidence 47888884 3689999999885421 555542 23323499999999998753211
Q ss_pred -----c--------ccCcchHHhHHHHHHHHHHHhCCCCCceE-EEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 54 -----L--------EMTSYTCFHVIGDLIGLIDLVAPNDEKMF-VVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 54 -----~--------~~~~~~~~~~~~~l~~~l~~l~~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+ +...++++++++++..+++++++ ++++ ++||||||++++.+|.++|++|+++|++++....
T Consensus 123 p~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 123 PASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 1 11247999999999999999999 8886 9999999999999999999999999999876644
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=2.8e-21 Score=156.92 Aligned_cols=228 Identities=14% Similarity=0.020 Sum_probs=127.7
Q ss_pred CceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcc---hHHhHHHHHHHHHHHhCCCCCceE
Q 045862 9 GPEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSY---TCFHVIGDLIGLIDLVAPNDEKMF 83 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~ 83 (271)
+|+||++||++++... +..++..|.++||+|+++|+||||.+..... ..+ ..++....+..+.++++. .+++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~-~~~~~~~~~D~~~~i~~l~~~~~~--~~~~ 134 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH-RIYHSGETEDARFFLRWLQREFGH--VPTA 134 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc-ceECCCchHHHHHHHHHHHHhCCC--CCEE
Confidence 5799999999887544 5678899999999999999999997754321 112 233333333334444566 7899
Q ss_pred EEEeChhhHHHHHHHHhhccc--cceEEEeecCCCCCCCCCcchHHHHhhhhHHH----HHHH-HHhhh--CCCCCCCCC
Q 045862 84 VVGHDSGTYMACFLCLFRANR--IKALVNLSVVFNPNTSEPGEIEAEFEQISTEI----VIKE-FLTLW--TPDPIILPK 154 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~--~~~~~~~~~ 154 (271)
++||||||.+++.++.++++. +.++|+++++...... .......+.. .... .+.. ..... ..... ..
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~-~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~--~~ 210 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEAC-SYRMEQGFSR-VYQRYLLNLLKANAARKLAAYPGTL--PI 210 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHH-HHHHhhhHHH-HHHHHHHHHHHHHHHHHHHhccccc--cC
Confidence 999999999988888887654 8999999987643100 0000000000 0111 0111 00000 11100 00
Q ss_pred CCCCCCCCCccccC-----CCCCCc-ccccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEe
Q 045862 155 GKGYGQPPDAIIAL-----PGWLSD-EDVNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIM 218 (271)
Q Consensus 155 ~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~ 218 (271)
.............. ...... ...+.|. .....+.++++| +|++|+++ ...+.+..++. +++++
T Consensus 211 ~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~ 289 (324)
T PRK10985 211 NLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNV-EYQLT 289 (324)
T ss_pred CHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCe-EEEEC
Confidence 00000000000000 000000 0011111 111222678899 99999875 33456677888 99999
Q ss_pred CCCCccccccCh-----HHHHHHHHHHHhhh
Q 045862 219 EGVGHFINQEKG-----HQLETEIGTSRGEK 244 (271)
Q Consensus 219 ~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 244 (271)
+++||+.++|.. -..-+.+.+|+...
T Consensus 290 ~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 290 EHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 999999998742 35666677777644
No 52
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.87 E-value=1.1e-20 Score=157.32 Aligned_cols=207 Identities=12% Similarity=0.023 Sum_probs=128.8
Q ss_pred CceEEEEeccCCCc-cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh---CCCCCceEE
Q 045862 9 GPEILFLYVFPELR-YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV---APNDEKMFV 84 (271)
Q Consensus 9 ~~~vlllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~l 84 (271)
.|+||+.||+.+.. ..|..+++.|+++||+|+++|+||+|.|.... ...+......++.+.+... +. +++.+
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld~l~~~~~vd~--~ri~l 269 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLNALPNVPWVDH--TRVAA 269 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHHHHHhCcccCc--ccEEE
Confidence 35666655655543 56888899999999999999999999996543 1233444445565666544 44 78999
Q ss_pred EEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCc
Q 045862 85 VGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDA 164 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (271)
+||||||.+++.+|..+|++++++|+++++........ ..... ........+...+... .. ....+...+
T Consensus 270 ~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~----~~~~~-~p~~~~~~la~~lg~~-~~--~~~~l~~~l-- 339 (414)
T PRK05077 270 FGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP----KRQQQ-VPEMYLDVLASRLGMH-DA--SDEALRVEL-- 339 (414)
T ss_pred EEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcch----hhhhh-chHHHHHHHHHHhCCC-CC--ChHHHHHHh--
Confidence 99999999999999999999999999998763210000 00000 0000111111111100 00 000000000
Q ss_pred cccCCCCCCcccccccccccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCccccccChHHHHHH
Q 045862 165 IIALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETE 236 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 236 (271)
.. +. +. ........+++| +|++|.++ .+.+.+..++. ++++++++ ++.+.++++++.
T Consensus 340 ----~~-~s---l~---~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~-~l~~i~~~---~~~e~~~~~~~~ 404 (414)
T PRK05077 340 ----NR-YS---LK---VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG-KLLEIPFK---PVYRNFDKALQE 404 (414)
T ss_pred ----hh-cc---ch---hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC-eEEEccCC---CccCCHHHHHHH
Confidence 00 00 00 000001457889 99999885 45667788999 99999986 566899999999
Q ss_pred HHHHHhhh
Q 045862 237 IGTSRGEK 244 (271)
Q Consensus 237 i~~fl~~~ 244 (271)
+.+||.+.
T Consensus 405 i~~wL~~~ 412 (414)
T PRK05077 405 ISDWLEDR 412 (414)
T ss_pred HHHHHHHH
Confidence 99999864
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.86 E-value=2.1e-20 Score=139.61 Aligned_cols=177 Identities=15% Similarity=0.072 Sum_probs=115.1
Q ss_pred ceEEEEeccCCCccchHH--HHHHHhhC--CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 10 PEILFLYVFPELRYSWCH--QTIALASL--SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~--~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
|+|||+||++++...|+. +.+.|++. +|+|+++|+|||| +++++++.+++++++. ++++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~--~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGG--DPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCC--CCeEEE
Confidence 689999999999999984 44666552 6999999999984 3578899999999998 899999
Q ss_pred EeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCcc
Q 045862 86 GHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDAI 165 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (271)
||||||.+++.+|.++|. ++|+++++..+ ...+..+.... .. ......
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-----------------~~~~~~~~~~~-~~-~~~~~~---------- 114 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVRP-----------------FELLTDYLGEN-EN-PYTGQQ---------- 114 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCCH-----------------HHHHHHhcCCc-cc-ccCCCc----------
Confidence 999999999999999983 46888876521 11122211110 00 000000
Q ss_pred ccCCCCCCcccccccccccccCCcc--cCC----CCCcchhc-hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHH
Q 045862 166 IALPGWLSDEDVNTTRPIGTNYCDL--TSV----CGVKEYIH-KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIG 238 (271)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~i--~~P----~G~~D~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 238 (271)
-.++...+.... ..+...+ ++| +|.+|.++ .+...+...++ +.++++|++|.+ +..+++.+.+.
T Consensus 115 ----~~~~~~~~~d~~--~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~~-~~~~~~ggdH~f--~~~~~~~~~i~ 185 (190)
T PRK11071 115 ----YVLESRHIYDLK--VMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAAC-RQTVEEGGNHAF--VGFERYFNQIV 185 (190)
T ss_pred ----EEEcHHHHHHHH--hcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHhc-ceEEECCCCcch--hhHHHhHHHHH
Confidence 000001110000 0111122 333 89999886 23333333466 888899999987 44588899999
Q ss_pred HHHh
Q 045862 239 TSRG 242 (271)
Q Consensus 239 ~fl~ 242 (271)
+|+.
T Consensus 186 ~fl~ 189 (190)
T PRK11071 186 DFLG 189 (190)
T ss_pred HHhc
Confidence 9875
No 54
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.85 E-value=6.1e-21 Score=161.13 Aligned_cols=107 Identities=13% Similarity=0.074 Sum_probs=90.3
Q ss_pred CceEEEEeccCCCccchH-----HHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceE
Q 045862 9 GPEILFLYVFPELRYSWC-----HQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMF 83 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~-----~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 83 (271)
++|||++||+.....+|+ .++++|.++||+|+++|++|+|.|.......+|..+.+.+++..+++.++. ++++
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~--~kv~ 265 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGE--KQVN 265 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCC--CCeE
Confidence 589999999998888885 799999999999999999999988765444567777788888888888898 8999
Q ss_pred EEEeChhhHHHH----HHHHhh-ccccceEEEeecCCCC
Q 045862 84 VVGHDSGTYMAC----FLCLFR-ANRIKALVNLSVVFNP 117 (271)
Q Consensus 84 lvGhS~Gg~ia~----~~a~~~-p~~v~~lvl~~~~~~~ 117 (271)
++||||||.++. .+++.. +++|+++++++++...
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 999999999852 245554 7899999999987765
No 55
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.84 E-value=5.3e-20 Score=143.28 Aligned_cols=104 Identities=19% Similarity=0.110 Sum_probs=86.9
Q ss_pred CceEEEEeccCCC----ccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHH---HhCCCCCc
Q 045862 9 GPEILFLYVFPEL----RYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLID---LVAPNDEK 81 (271)
Q Consensus 9 ~~~vlllHG~~~~----~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~---~l~~~~~~ 81 (271)
.++|||+||++.. ...|..+++.|+++||+|+++|+||||.|.... ...+++.+++|+..+++ +.+. ++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~--~~ 100 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGH--PP 100 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCC--CC
Confidence 3689999999864 345777889999889999999999999997654 34577788888777554 4456 79
Q ss_pred eEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 82 MFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
++|+||||||.+++.+|.++|++++++|+++|...
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999999998653
No 56
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=7.7e-20 Score=143.22 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=81.1
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCC-CCCCCCcccCcchHHhHHHHHHHHHHHh---CCCCCceEE
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGF-GDTDELLEMTSYTCFHVIGDLIGLIDLV---APNDEKMFV 84 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~l 84 (271)
.++||+.||+++....+..+++.|+++||.|+.+|.+|+ |+|+... ...+......|+.++++.+ +. +++.|
T Consensus 37 ~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s~g~~Dl~aaid~lk~~~~--~~I~L 112 (307)
T PRK13604 37 NNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMSIGKNSLLTVVDWLNTRGI--NNLGL 112 (307)
T ss_pred CCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCcccccHHHHHHHHHHHHhcCC--CceEE
Confidence 368999999999887799999999999999999999987 9997654 3344444567776666554 44 68999
Q ss_pred EEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 85 VGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
+||||||.+|+.+|... .++++|+.+|..
T Consensus 113 iG~SmGgava~~~A~~~--~v~~lI~~sp~~ 141 (307)
T PRK13604 113 IAASLSARIAYEVINEI--DLSFLITAVGVV 141 (307)
T ss_pred EEECHHHHHHHHHhcCC--CCCEEEEcCCcc
Confidence 99999999997777643 388899888765
No 57
>PLN02872 triacylglycerol lipase
Probab=99.83 E-value=3.5e-20 Score=152.48 Aligned_cols=108 Identities=21% Similarity=0.252 Sum_probs=83.9
Q ss_pred CceEEEEeccCCCccchH------HHHHHHhhCCCeEEeeCCCCCCCCCCC-------cccCcchHHhHH-HHHHHHHHH
Q 045862 9 GPEILFLYVFPELRYSWC------HQTIALASLSYRAVAPDLSGFGDTDEL-------LEMTSYTCFHVI-GDLIGLIDL 74 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~-~~l~~~l~~ 74 (271)
+|+|||+||++.++..|. .+...|+++||+|+++|+||++.|... .....+++++++ .|+.++++.
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~ 153 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHY 153 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHH
Confidence 579999999999998883 455678888999999999998765321 111257888888 899999998
Q ss_pred hC-CCCCceEEEEeChhhHHHHHHHHhhcc---ccceEEEeecCCCC
Q 045862 75 VA-PNDEKMFVVGHDSGTYMACFLCLFRAN---RIKALVNLSVVFNP 117 (271)
Q Consensus 75 l~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~ 117 (271)
+. .+.++++++|||+||.+++.++ .+|+ +|+++++++|....
T Consensus 154 i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 154 VYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred HHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 62 1117899999999999998555 5676 68888888886543
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=1.4e-18 Score=136.53 Aligned_cols=102 Identities=33% Similarity=0.533 Sum_probs=86.2
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhC--CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASL--SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
+|+++|+||++++...|......+... .|+++++|+||||.|. . . .++...+++++..++++++. .+++++|
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~--~-~-~~~~~~~~~~~~~~~~~~~~--~~~~l~G 94 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD--P-A-GYSLSAYADDLAALLDALGL--EKVVLVG 94 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC--c-c-cccHHHHHHHHHHHHHHhCC--CceEEEE
Confidence 568999999999999998854444332 1899999999999997 1 1 34445559999999999998 7899999
Q ss_pred eChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 87 HDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
||+||.+++.++.++|++++++|++++...
T Consensus 95 ~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 95 HSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred ecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 999999999999999999999999998754
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.81 E-value=3.1e-19 Score=146.59 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=82.8
Q ss_pred CceEEEEeccCCCccch-----HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHH-----HHHHHHHHHhCCC
Q 045862 9 GPEILFLYVFPELRYSW-----CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVI-----GDLIGLIDLVAPN 78 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~-----~~l~~~l~~l~~~ 78 (271)
+++||++||+..+...+ +.+++.|.++||+|+++|++|+|.|... .++++++ +.+..+++..+.
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-----~~~~d~~~~~~~~~v~~l~~~~~~- 135 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-----LTLDDYINGYIDKCVDYICRTSKL- 135 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-----CCHHHHHHHHHHHHHHHHHHHhCC-
Confidence 46899999987655554 6899999999999999999999987543 3444444 334555566677
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
++++++||||||.+++.++..+|++|+++|+++++...
T Consensus 136 -~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 136 -DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred -CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 89999999999999999999999999999999987754
No 60
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.81 E-value=3e-19 Score=138.12 Aligned_cols=198 Identities=18% Similarity=0.203 Sum_probs=119.4
Q ss_pred CeEEeeCCCCCCCCCC--CcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 37 YRAVAPDLSGFGDTDE--LLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 37 ~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
|+|+++|+||+|.|++ ......++.+++++++..++++++. ++++++||||||.+++.+|.++|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999999995 1444789999999999999999999 88999999999999999999999999999999986
Q ss_pred C--CC---CCCCCc-chHHHHhhh-------hHHHHHHHHHhhh-CCCCCCCCCCCCCCCCCCccccCC-CCCCccc---
Q 045862 115 F--NP---NTSEPG-EIEAEFEQI-------STEIVIKEFLTLW-TPDPIILPKGKGYGQPPDAIIALP-GWLSDED--- 176 (271)
Q Consensus 115 ~--~~---~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--- 176 (271)
. .. .+.... .....+... ........+.... ............... ........ .......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQ-SQQYARFAETDAFDNMFWN 157 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-HHHHHHTCHHHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccc-hhhhhHHHHHHHHhhhccc
Confidence 2 00 000000 000000000 0000000000000 000000000000000 00000000 0000000
Q ss_pred -ccccc--cccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHH
Q 045862 177 -VNTTR--PIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIG 238 (271)
Q Consensus 177 -~~~~~--~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 238 (271)
...+. ........+++| +|++|.++ ...+.+.+|+. ++++++++||+.++++|+++++.|.
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNS-QLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTE-EEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-EEEECCCCChHHHhcCHHhhhhhhc
Confidence 00000 001111568899 99999884 55678999999 9999999999999999999999875
No 61
>PRK10566 esterase; Provisional
Probab=99.81 E-value=4.1e-18 Score=133.66 Aligned_cols=105 Identities=16% Similarity=0.131 Sum_probs=74.1
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcc-----hHHhHHHHHHHHHHHh----CCCC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSY-----TCFHVIGDLIGLIDLV----APND 79 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~-----~~~~~~~~l~~~l~~l----~~~~ 79 (271)
.|+||++||++++...|..+...|+++||+|+++|+||||.+......... .+....+|+..+++.+ .++.
T Consensus 27 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLD 106 (249)
T ss_pred CCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCc
Confidence 479999999999999999999999999999999999999976432110000 0112233333333332 1322
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeec
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
++++++|||+||.+++.++.++|+....++++++
T Consensus 107 ~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~ 140 (249)
T PRK10566 107 DRLAVGGASMGGMTALGIMARHPWVKCVASLMGS 140 (249)
T ss_pred cceeEEeecccHHHHHHHHHhCCCeeEEEEeeCc
Confidence 6899999999999999999988875444455443
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.79 E-value=2.9e-18 Score=157.75 Aligned_cols=232 Identities=17% Similarity=0.147 Sum_probs=139.0
Q ss_pred CCceEEEEeccCCCccchHHH-----HHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH---hCCCC
Q 045862 8 QGPEILFLYVFPELRYSWCHQ-----TIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL---VAPND 79 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~-----~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~---l~~~~ 79 (271)
.++||||+||++.+...|+.+ ++.|.++||+|+++|+ |.|+.+......++.+++..+.+.++. +..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~-- 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG-- 140 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC--
Confidence 468999999999999999875 8999888999999994 666554321235677777666666654 344
Q ss_pred CceEEEEeChhhHHHHHHHHhh-ccccceEEEeecCCCCCC----CCCcch--------H----------HHHh-----h
Q 045862 80 EKMFVVGHDSGTYMACFLCLFR-ANRIKALVNLSVVFNPNT----SEPGEI--------E----------AEFE-----Q 131 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~~----~~~~~~--------~----------~~~~-----~ 131 (271)
++++|+||||||.+++.+++.+ +++|+++|+++++..... ..+... . .++. .
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 6899999999999999988755 568999999888754311 000000 0 0000 0
Q ss_pred hhHHHHHHH---HHhhhCCCCCCCCCCCCCCCCCCccc--cCCCCCCccccccc------c-------cccccCCcccCC
Q 045862 132 ISTEIVIKE---FLTLWTPDPIILPKGKGYGQPPDAII--ALPGWLSDEDVNTT------R-------PIGTNYCDLTSV 193 (271)
Q Consensus 132 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------~-------~~~~~~~~i~~P 193 (271)
..+...... ++..+........ ...+..+..... ..........++.+ . ....++.++++|
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~-~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P 299 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLP-REQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCP 299 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhcc-chhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCC
Confidence 000000111 1111111111000 000001100000 00000000000000 0 111245789999
Q ss_pred ----CCCcchhc----hhHHhhhcCCCceE-EEeCCCCccccc---cChHHHHHHHHHHHhhhhh
Q 045862 194 ----CGVKEYIH----KGEFRRDVPLLEEI-TIMEGVGHFINQ---EKGHQLETEIGTSRGEKKQ 246 (271)
Q Consensus 194 ----~G~~D~~~----~~~~~~~~~~~~~~-~~~~~~gH~~~~---e~p~~~~~~i~~fl~~~~~ 246 (271)
+|++|.++ .+.+.+.+++. ++ .+++++||+.++ ..++++...|.+||.....
T Consensus 300 ~L~i~G~~D~ivp~~~~~~l~~~i~~a-~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 300 VLAFVGEVDDIGQPASVRGIRRAAPNA-EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCC-eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 99999884 56788889999 87 688999999876 4678899999999998753
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.74 E-value=5.3e-17 Score=116.57 Aligned_cols=93 Identities=29% Similarity=0.391 Sum_probs=76.3
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChh
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSG 90 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~G 90 (271)
+|||+||++++...|..+.+.|+++||.|+++|+||+|.+... ...+++.+++. .+..+. +++.++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~--~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----DAVERVLADIR--AGYPDP--DRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----HHHHHHHHHHH--HHHCTC--CEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----HHHHHHHHHHH--hhcCCC--CcEEEEEEccC
Confidence 6899999999999999999999999999999999999988321 23333333333 112355 89999999999
Q ss_pred hHHHHHHHHhhccccceEEEeec
Q 045862 91 TYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 91 g~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
|.+++.++.+. .+++++|++++
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESE
T ss_pred cHHHHHHhhhc-cceeEEEEecC
Confidence 99999999988 78999999997
No 64
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.74 E-value=3.3e-17 Score=135.00 Aligned_cols=105 Identities=11% Similarity=0.099 Sum_probs=82.5
Q ss_pred CCceEEEEeccCCCc--cchHH-HHHHHhh--CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh------C
Q 045862 8 QGPEILFLYVFPELR--YSWCH-QTIALAS--LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV------A 76 (271)
Q Consensus 8 ~~~~vlllHG~~~~~--~~~~~-~~~~l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l------~ 76 (271)
++|++|+||||+.+. ..|.. +.+.|.. ..|+||++|++|+|.|..+. .......+++++..+++.+ +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~--a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT--SAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc--ccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 479999999998754 45775 5555542 24999999999999886554 2233466777777777754 3
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
+ ++++||||||||.||..++.++|++|.++++++|..+
T Consensus 118 l--~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 W--DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred C--CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 5 7999999999999999999999999999999998643
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.74 E-value=2.6e-17 Score=122.56 Aligned_cols=218 Identities=12% Similarity=0.061 Sum_probs=139.8
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH-hCCCCCceEEEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL-VAPNDEKMFVVG 86 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~lvG 86 (271)
..+.++|+|-.|+++..|+.+...|... ..++++++||.|..-..+ ...+++++++.|...+.. +.- .++.++|
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d--~P~alfG 80 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLD--APFALFG 80 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCC--CCeeecc
Confidence 3568999999999999999999999885 999999999999775544 467899999999888873 332 7999999
Q ss_pred eChhhHHHHHHHHhhcc---ccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCC
Q 045862 87 HDSGTYMACFLCLFRAN---RIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPD 163 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (271)
|||||++|.++|.+... ...++.+.+...+... ....+....-..+++.+...-...+. .-.+..+...+-
T Consensus 81 HSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~-----~~~~i~~~~D~~~l~~l~~lgG~p~e-~led~El~~l~L 154 (244)
T COG3208 81 HSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYD-----RGKQIHHLDDADFLADLVDLGGTPPE-LLEDPELMALFL 154 (244)
T ss_pred cchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCc-----ccCCccCCCHHHHHHHHHHhCCCChH-HhcCHHHHHHHH
Confidence 99999999999998643 2566666665443210 11112222333344444333222111 111111110000
Q ss_pred ccccCCCCCC-cccccccccccccCCcccCC----CCCcchhch----hHHhhhcCCCceEEEeCCCCccccccChHHHH
Q 045862 164 AIIALPGWLS-DEDVNTTRPIGTNYCDLTSV----CGVKEYIHK----GEFRRDVPLLEEITIMEGVGHFINQEKGHQLE 234 (271)
Q Consensus 164 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~P----~G~~D~~~~----~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~ 234 (271)
+..-+ -..+..|..... ..+.|| .|++|..++ ..+++...+.+++.+|+| |||...++.+++.
T Consensus 155 -----PilRAD~~~~e~Y~~~~~--~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~ 226 (244)
T COG3208 155 -----PILRADFRALESYRYPPP--APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVL 226 (244)
T ss_pred -----HHHHHHHHHhcccccCCC--CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHH
Confidence 00000 000111110000 457788 899998863 346666665559999986 9999999999999
Q ss_pred HHHHHHHhhh
Q 045862 235 TEIGTSRGEK 244 (271)
Q Consensus 235 ~~i~~fl~~~ 244 (271)
+.|.+.+...
T Consensus 227 ~~i~~~l~~~ 236 (244)
T COG3208 227 ARLEQHLAHH 236 (244)
T ss_pred HHHHHHhhhh
Confidence 9999888643
No 66
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.70 E-value=1.2e-16 Score=126.19 Aligned_cols=107 Identities=15% Similarity=0.178 Sum_probs=79.4
Q ss_pred CCceEEEEeccCCCc-cchHHH-HHHH-hhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh----CCCCC
Q 045862 8 QGPEILFLYVFPELR-YSWCHQ-TIAL-ASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----APNDE 80 (271)
Q Consensus 8 ~~~~vlllHG~~~~~-~~~~~~-~~~l-~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~ 80 (271)
++|++|+||||+++. ..|... ...| ...+|+|+++|+++++.+..+. ...+...+++++..+++.+ +.+.+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 368999999999887 667654 4434 4447999999999984433222 2345555566666666554 22116
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
+++||||||||.+|..++.++|++|.++++++|..+
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 899999999999999999999999999999998653
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.69 E-value=2.1e-15 Score=116.49 Aligned_cols=105 Identities=9% Similarity=-0.031 Sum_probs=71.2
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc--c-------Ccc---hHHhHHHHH----HHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE--M-------TSY---TCFHVIGDL----IGLI 72 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--~-------~~~---~~~~~~~~l----~~~l 72 (271)
.|.|||+||++++...|..+.+.|.+.++++.+++.+|...+..... + ... .+.+..+.+ ..+.
T Consensus 16 ~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 95 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQ 95 (232)
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999987655556666666532211100 0 001 122222333 3333
Q ss_pred HHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeec
Q 045862 73 DLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 73 ~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
+.++++.++++|+|||+||.+++.++.++|+.+.+++.+++
T Consensus 96 ~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg 136 (232)
T PRK11460 96 QQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG 136 (232)
T ss_pred HhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc
Confidence 44455335899999999999999999999988887877664
No 68
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.69 E-value=5.3e-16 Score=121.20 Aligned_cols=103 Identities=18% Similarity=0.258 Sum_probs=92.1
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhC---C------CeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCC
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASL---S------YRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDE 80 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~---g------~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 80 (271)
-|||++|||+++-..|-.+++.|.+- | |.||++.+||+|.|+.+.. ..++....|.-+..++=.+|. +
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk-~GFn~~a~ArvmrkLMlRLg~--n 229 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK-TGFNAAATARVMRKLMLRLGY--N 229 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-CCccHHHHHHHHHHHHHHhCc--c
Confidence 38999999999999999999999753 2 7899999999999998875 578888999999999999999 9
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
++.+-|-.||+.|+..+|..+|+.|.++-+--+..
T Consensus 230 kffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 230 KFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred eeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 99999999999999999999999998876655443
No 69
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.68 E-value=2.1e-15 Score=109.44 Aligned_cols=212 Identities=17% Similarity=0.157 Sum_probs=130.9
Q ss_pred ccCCCceEEEEeccCCCcc--chHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCc-
Q 045862 5 EKGQGPEILFLYVFPELRY--SWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEK- 81 (271)
Q Consensus 5 ~~g~~~~vlllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~- 81 (271)
+.|+...+|++||+-++.. ....++..|.+.|+.++.+|++|.|+|+.......| ...|+|+..++.++.-. .+
T Consensus 29 ~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~--~~eadDL~sV~q~~s~~-nr~ 105 (269)
T KOG4667|consen 29 ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNY--NTEADDLHSVIQYFSNS-NRV 105 (269)
T ss_pred ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcc--cchHHHHHHHHHHhccC-ceE
Confidence 3556789999999987654 356778889989999999999999999987744444 45669999999988431 22
Q ss_pred -eEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCC
Q 045862 82 -MFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQ 160 (271)
Q Consensus 82 -~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (271)
-+++|||-||.+++.+|.++++ +.-+|.+++-+... ..+...+.. ..+......-+-+ ...
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~----~~I~eRlg~----~~l~~ike~Gfid---~~~------ 167 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLK----NGINERLGE----DYLERIKEQGFID---VGP------ 167 (269)
T ss_pred EEEEEeecCccHHHHHHHHhhcC-chheEEcccccchh----cchhhhhcc----cHHHHHHhCCcee---cCc------
Confidence 3689999999999999999987 77778777655321 001001111 1111111110100 000
Q ss_pred CCCccccCCCCCCcccccccccccccC----CcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCcccccc
Q 045862 161 PPDAIIALPGWLSDEDVNTTRPIGTNY----CDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQE 228 (271)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e 228 (271)
........++++.+.........- -..+|| +|..|.++ +..+++.+|+. ++.++||+.|..-..
T Consensus 168 ---rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH-~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 168 ---RKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH-KLEIIEGADHNYTGH 243 (269)
T ss_pred ---ccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCC-ceEEecCCCcCccch
Confidence 000011111222111111000000 234566 99999885 78899999998 999999999986543
Q ss_pred ChHHHHHHHHHHHh
Q 045862 229 KGHQLETEIGTSRG 242 (271)
Q Consensus 229 ~p~~~~~~i~~fl~ 242 (271)
..+++.....|..
T Consensus 244 -q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 244 -QSQLVSLGLEFIK 256 (269)
T ss_pred -hhhHhhhcceeEE
Confidence 3344444444443
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.63 E-value=3.1e-14 Score=113.04 Aligned_cols=110 Identities=20% Similarity=0.295 Sum_probs=79.5
Q ss_pred CCceEEEEeccCCCccchHHH--HHHHh-hCCCeEEeeCC--CCCCCCCCCcc------------------cCcchHHh-
Q 045862 8 QGPEILFLYVFPELRYSWCHQ--TIALA-SLSYRAVAPDL--SGFGDTDELLE------------------MTSYTCFH- 63 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~--~~~l~-~~g~~vi~~D~--~G~G~S~~~~~------------------~~~~~~~~- 63 (271)
+.|+|+|+||++++...|... +..++ +.|+.|+++|. +|+|.+..... ...++...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 358999999999999888543 34454 45899999998 55554321100 01223333
Q ss_pred HHHHHHHHHHH-hCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 64 VIGDLIGLIDL-VAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 64 ~~~~l~~~l~~-l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.++++..+++. ++++.+++.++||||||.+|+.++.++|+.+++++++++...+
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAP 175 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCc
Confidence 46788888876 3332278999999999999999999999999999999887543
No 71
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.62 E-value=8.3e-15 Score=113.41 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=85.5
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
++|+|+|+.+++...|..+++.|.+.++.|+.++.+|.+.... ...+++++++...+.|...... +++.|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~-gp~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPE-GPYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSS-SSEEEEEETH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCC-CCeeehccCc
Confidence 4899999999999999999999988448999999999983322 2478999999999888877662 4999999999
Q ss_pred hhHHHHHHHHhhc---cccceEEEeecCCC
Q 045862 90 GTYMACFLCLFRA---NRIKALVNLSVVFN 116 (271)
Q Consensus 90 Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 116 (271)
||.+|+++|.+.- ..|..|++++++.+
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 9999999998854 34889999997654
No 72
>PLN00021 chlorophyllase
Probab=99.62 E-value=3.9e-15 Score=119.18 Aligned_cols=105 Identities=26% Similarity=0.245 Sum_probs=77.9
Q ss_pred CCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH-------hCCCC
Q 045862 7 GQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL-------VAPND 79 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~ 79 (271)
|..|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~-- 125 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDL-- 125 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccCh--
Confidence 356899999999999999999999999999999999999975432111 111222333333332222 233
Q ss_pred CceEEEEeChhhHHHHHHHHhhcc-----ccceEEEeecCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRAN-----RIKALVNLSVVF 115 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~ 115 (271)
++++++|||+||.+|+.+|.++++ ++.++|++++..
T Consensus 126 ~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 126 SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 679999999999999999999874 578999998764
No 73
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.62 E-value=8.9e-15 Score=111.33 Aligned_cols=103 Identities=18% Similarity=0.167 Sum_probs=94.8
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChh
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSG 90 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~G 90 (271)
|||-+||-+++..+|+.+.+.|.+.|.|+|.+++||+|.++.+.. ..|+-++.+.-+.++++.++++ ++++.+|||.|
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrG 114 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIK-GKLIFLGHSRG 114 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCC-CceEEEEeccc
Confidence 899999999999999999999999999999999999999988775 5789999999999999999996 78999999999
Q ss_pred hHHHHHHHHhhccccceEEEeecCCCC
Q 045862 91 TYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 91 g~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+-.|+.+|..+| ..++++++|+...
T Consensus 115 cenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 115 CENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred hHHHHHHHhcCc--cceEEEecCCccc
Confidence 999999999996 6799999986543
No 74
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.62 E-value=1.6e-14 Score=108.58 Aligned_cols=184 Identities=14% Similarity=0.066 Sum_probs=122.1
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHH-HhCCCCCceEEEE
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLID-LVAPNDEKMFVVG 86 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~-~l~~~~~~~~lvG 86 (271)
.+++++.||...+....-.+...|..+ +++|+++|++|+|.|+..+ ...+..+-++.+-+.++ ..| ++++++|.|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p--sE~n~y~Di~avye~Lr~~~g-~~~~Iil~G 136 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP--SERNLYADIKAVYEWLRNRYG-SPERIILYG 136 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCc--ccccchhhHHHHHHHHHhhcC-CCceEEEEE
Confidence 379999999966665444455555552 5999999999999998776 23333333333333343 344 238999999
Q ss_pred eChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCccc
Q 045862 87 HDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDAII 166 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (271)
+|+|+..++.+|++.| +.++||.+|..... +.+.. .... . .+.+.
T Consensus 137 ~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~--------------------rv~~~----~~~~--~--~~~d~----- 181 (258)
T KOG1552|consen 137 QSIGTVPTVDLASRYP--LAAVVLHSPFTSGM--------------------RVAFP----DTKT--T--YCFDA----- 181 (258)
T ss_pred ecCCchhhhhHhhcCC--cceEEEeccchhhh--------------------hhhcc----Ccce--E--Eeecc-----
Confidence 9999999999999998 99999999876320 00000 0000 0 00000
Q ss_pred cCCCCCCcccccccccccccCCcccCC----CCCcchhc----hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHH
Q 045862 167 ALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIG 238 (271)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 238 (271)
+.. ......+++| +|.+|.++ ...+-+..++..+-.++.|+||.-. +...++.+.+.
T Consensus 182 -----f~~---------i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~ 246 (258)
T KOG1552|consen 182 -----FPN---------IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLR 246 (258)
T ss_pred -----ccc---------cCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccc-ccCHHHHHHHH
Confidence 000 1122568889 99999884 6778888877657788899999844 44556778888
Q ss_pred HHHhhhh
Q 045862 239 TSRGEKK 245 (271)
Q Consensus 239 ~fl~~~~ 245 (271)
.|+....
T Consensus 247 ~f~~~~~ 253 (258)
T KOG1552|consen 247 RFISSVL 253 (258)
T ss_pred HHHHHhc
Confidence 8887663
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.61 E-value=3.4e-14 Score=113.09 Aligned_cols=106 Identities=21% Similarity=0.207 Sum_probs=76.5
Q ss_pred CceEEEEeccCCCccchHH---HHHHHhhCCCeEEeeCCCCCC-----CCCC-----C---------c-----ccCcchH
Q 045862 9 GPEILFLYVFPELRYSWCH---QTIALASLSYRAVAPDLSGFG-----DTDE-----L---------L-----EMTSYTC 61 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~---~~~~l~~~g~~vi~~D~~G~G-----~S~~-----~---------~-----~~~~~~~ 61 (271)
.|.|+|+||++++...|.. +...+...|+.|+.+|..++| .+.. . . ....+-.
T Consensus 47 ~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 47 VPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 4899999999998887754 335566669999999988766 1110 0 0 0001223
Q ss_pred HhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 62 FHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
+++...+....+.++. ++++++||||||.+|+.++.++|+++++++.+++...
T Consensus 127 ~~l~~~i~~~~~~~~~--~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 127 KELPKLLSDNFDQLDT--SRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHhcCC--CceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 4444445554555566 8899999999999999999999999999999998754
No 76
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.58 E-value=1.2e-14 Score=127.11 Aligned_cols=92 Identities=16% Similarity=0.123 Sum_probs=77.0
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCC---------c-ccCc-----------chHHhHHHHH
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDEL---------L-EMTS-----------YTCFHVIGDL 68 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---------~-~~~~-----------~~~~~~~~~l 68 (271)
|+|||+||++++...|..+++.|+++||+|+++|+||||.|... . .... .++++.+.|+
T Consensus 450 P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dl 529 (792)
T TIGR03502 450 PVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDL 529 (792)
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHH
Confidence 58999999999999999999999988999999999999999543 1 0011 2789999999
Q ss_pred HHHHHHhC--------------CCCCceEEEEeChhhHHHHHHHHhh
Q 045862 69 IGLIDLVA--------------PNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 69 ~~~l~~l~--------------~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
..+...++ .+..+++++||||||.+++.++...
T Consensus 530 l~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 530 LGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 99988886 2125899999999999999999753
No 77
>PRK10162 acetyl esterase; Provisional
Probab=99.56 E-value=6.7e-13 Score=107.47 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=76.0
Q ss_pred CceEEEEeccC---CCccchHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEE
Q 045862 9 GPEILFLYVFP---ELRYSWCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFV 84 (271)
Q Consensus 9 ~~~vlllHG~~---~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~l 84 (271)
.|.||++||.+ ++...|..++..|+. .|+.|+.+|+|...+...+. ...++....+.+.+..+.++++.++++|
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~l 158 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIGF 158 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEEE
Confidence 57899999977 566778889998987 48999999999765443222 1122333334444444556653368999
Q ss_pred EEeChhhHHHHHHHHhh------ccccceEEEeecCCC
Q 045862 85 VGHDSGTYMACFLCLFR------ANRIKALVNLSVVFN 116 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~ 116 (271)
+|+|+||.+|+.++.+. +.++.+++++.+...
T Consensus 159 ~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 159 AGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999998764 357889999987654
No 78
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.56 E-value=3.5e-13 Score=108.56 Aligned_cols=106 Identities=16% Similarity=0.134 Sum_probs=76.3
Q ss_pred CCCceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC--CCCce
Q 045862 7 GQGPEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP--NDEKM 82 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~~ 82 (271)
+..|+||++||+.+++.. .+.++..++++||+|++++.||+|.|.-.+. ..--..+.+|+.++++++.- ++.+.
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp--r~f~ag~t~Dl~~~v~~i~~~~P~a~l 200 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP--RLFTAGWTEDLREVVNHIKKRYPQAPL 200 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC--ceeecCCHHHHHHHHHHHHHhCCCCce
Confidence 456999999999776543 4677777888899999999999998876552 22223455666666665521 12689
Q ss_pred EEEEeChhhHHHHHHHHhhcc---ccceEEEeecC
Q 045862 83 FVVGHDSGTYMACFLCLFRAN---RIKALVNLSVV 114 (271)
Q Consensus 83 ~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 114 (271)
..+|.||||.+...+..+..+ .+.++.+++|.
T Consensus 201 ~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 201 FAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred EEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 999999999999999987543 34555555543
No 79
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.55 E-value=2.5e-13 Score=103.42 Aligned_cols=234 Identities=15% Similarity=0.103 Sum_probs=144.6
Q ss_pred cccccC----CCceEEEEeccCCCccc-hHHH-----HHHHhhCCCeEEeeCCCCCCCCCC--CcccCcchHHhHHHHHH
Q 045862 2 HVAEKG----QGPEILFLYVFPELRYS-WCHQ-----TIALASLSYRAVAPDLSGFGDTDE--LLEMTSYTCFHVIGDLI 69 (271)
Q Consensus 2 ~y~~~g----~~~~vlllHG~~~~~~~-~~~~-----~~~l~~~g~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~~l~ 69 (271)
|+...| .+|.+|-.|.++.+... |..+ +..+.++ |-|+-+|-||+-.-.+ +.+..--|+++++++|.
T Consensus 35 ~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~ 113 (326)
T KOG2931|consen 35 HVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLP 113 (326)
T ss_pred EEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHH
Confidence 444555 36889999999987766 7665 3566776 9999999999854433 22222459999999999
Q ss_pred HHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhh--------hhHHHHHHHH
Q 045862 70 GLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQ--------ISTEIVIKEF 141 (271)
Q Consensus 70 ~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 141 (271)
.+++++++ +.++-+|.-.|+.|..++|..+|++|.+|||+++.... +++....... ..+...+..+
T Consensus 114 ~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a----~gwiew~~~K~~s~~l~~~Gmt~~~~d~ 187 (326)
T KOG2931|consen 114 EVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA----KGWIEWAYNKVSSNLLYYYGMTQGVKDY 187 (326)
T ss_pred HHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC----chHHHHHHHHHHHHHHHhhchhhhHHHH
Confidence 99999999 99999999999999999999999999999999986633 1212111111 1111111111
Q ss_pred H-hhhCCCCCCCCCCCCCCCCCCccccCCCCCCcc----cccccc-cccccC------CcccCC----CCCcchhch--h
Q 045862 142 L-TLWTPDPIILPKGKGYGQPPDAIIALPGWLSDE----DVNTTR-PIGTNY------CDLTSV----CGVKEYIHK--G 203 (271)
Q Consensus 142 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~------~~i~~P----~G~~D~~~~--~ 203 (271)
+ ...+..+.... ..++.+.++.. ........ .+..|. +..+.. ..++|| .|+..+... .
T Consensus 188 ll~H~Fg~e~~~~-~~diVq~Yr~~--l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv 264 (326)
T KOG2931|consen 188 LLAHHFGKEELGN-NSDIVQEYRQH--LGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAVV 264 (326)
T ss_pred HHHHHhccccccc-cHHHHHHHHHH--HHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhhhhh
Confidence 1 11111111111 11110000000 00001101 111111 111111 256688 787776642 2
Q ss_pred HHhhhc-CCCceEEEeCCCCccccccChHHHHHHHHHHHhhhh
Q 045862 204 EFRRDV-PLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEKK 245 (271)
Q Consensus 204 ~~~~~~-~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 245 (271)
.+...+ |.-+.+..+.+||-.+..++|.++++.+.=|++...
T Consensus 265 ~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 265 ECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred hhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 333333 332378889999999999999999999999999874
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.54 E-value=7e-14 Score=106.81 Aligned_cols=109 Identities=10% Similarity=0.063 Sum_probs=75.4
Q ss_pred CCceEEEEeccCCCccchH---HHHHHHhhCCCeEEeeCCCCCCCCCCCccc--------CcchHHhHHHHHHHHHHHhC
Q 045862 8 QGPEILFLYVFPELRYSWC---HQTIALASLSYRAVAPDLSGFGDTDELLEM--------TSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~---~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--------~~~~~~~~~~~l~~~l~~l~ 76 (271)
..|.||++||.+++...|. .+...+.+.||.|+++|.+|++.+....++ ......++.+.+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4589999999998877765 344445556999999999998755321100 00111222223333333444
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
++.++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 4335899999999999999999999999999998887653
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.54 E-value=2.2e-13 Score=106.03 Aligned_cols=231 Identities=14% Similarity=0.064 Sum_probs=121.6
Q ss_pred CceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh----CCCCCce
Q 045862 9 GPEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----APNDEKM 82 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~ 82 (271)
.|.||++||+.+++.+ -+.++..+.++||.|+++++|||+.+..... .-|+ ..+.+|+..+++.+ .. .++
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p-~~yh-~G~t~D~~~~l~~l~~~~~~--r~~ 150 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP-RLYH-SGETEDIRFFLDWLKARFPP--RPL 150 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc-ceec-ccchhHHHHHHHHHHHhCCC--Cce
Confidence 5899999999776543 4677889999999999999999998865431 1121 22225555555554 33 789
Q ss_pred EEEEeChhh-HHHHHHHHhhcc-ccceEEEeecCCCCC---CCCCcchH-HHHhhhhHHHHHHHHHhhhCCCCCCCCCC-
Q 045862 83 FVVGHDSGT-YMACFLCLFRAN-RIKALVNLSVVFNPN---TSEPGEIE-AEFEQISTEIVIKEFLTLWTPDPIILPKG- 155 (271)
Q Consensus 83 ~lvGhS~Gg-~ia~~~a~~~p~-~v~~lvl~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 155 (271)
..+|.|+|| +++..++..-.+ .+.+.+.++.+.... ........ ..+.+.-...+.+.....+..-....+..
T Consensus 151 ~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~ 230 (345)
T COG0429 151 YAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTV 230 (345)
T ss_pred EEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHH
Confidence 999999999 555555543222 355555555444321 00000011 11111111111111111110001111111
Q ss_pred CCCCCCCCccccCCCCCC-----ccc-ccccc--cccccCCcccCC----CCCcchhchh----HHhh-hcCCCceEEEe
Q 045862 156 KGYGQPPDAIIALPGWLS-----DED-VNTTR--PIGTNYCDLTSV----CGVKEYIHKG----EFRR-DVPLLEEITIM 218 (271)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~-----~~~-~~~~~--~~~~~~~~i~~P----~G~~D~~~~~----~~~~-~~~~~~~~~~~ 218 (271)
....+.++........++ -.+ .++|. ++.-.+.+|.+| +..+|+++.. .... ..|+. .+..-
T Consensus 231 ~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v-~l~~t 309 (345)
T COG0429 231 LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNV-LLQLT 309 (345)
T ss_pred HHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCce-EEEee
Confidence 001111111111111111 111 11222 223333889999 9999988522 2222 55666 88888
Q ss_pred CCCCcccccc----ChH-HHHHHHHHHHhhh
Q 045862 219 EGVGHFINQE----KGH-QLETEIGTSRGEK 244 (271)
Q Consensus 219 ~~~gH~~~~e----~p~-~~~~~i~~fl~~~ 244 (271)
+.+||.-++. +|. ...+.+.+|++..
T Consensus 310 ~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 310 EHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred cCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 9999987776 443 5667778888765
No 82
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.54 E-value=6e-14 Score=108.11 Aligned_cols=226 Identities=12% Similarity=0.049 Sum_probs=121.2
Q ss_pred CceEEEEeccCCCccc-hHHHH-----HHHhhCCCeEEeeCCCCCCCCCC--CcccCcchHHhHHHHHHHHHHHhCCCCC
Q 045862 9 GPEILFLYVFPELRYS-WCHQT-----IALASLSYRAVAPDLSGFGDTDE--LLEMTSYTCFHVIGDLIGLIDLVAPNDE 80 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~-~~~~~-----~~l~~~g~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 80 (271)
+|++|-.|-.|.+... |..+. ..+.++ |-++-+|.||+..-.. +.+..-.|+++++++|.++++++++ +
T Consensus 23 kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l--k 99 (283)
T PF03096_consen 23 KPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGL--K 99 (283)
T ss_dssp S-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT----
T ss_pred CceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCc--c
Confidence 6899999999988776 77664 556665 9999999999965433 3322345999999999999999999 9
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhh--------HHHHHHH-HHhhhCCCCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQIS--------TEIVIKE-FLTLWTPDPII 151 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~ 151 (271)
.++.+|--.||.|..++|..+|++|.++||+++..... +.......... +...+.. +....+.....
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~----gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~ 175 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAA----GWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEE 175 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-------HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHH
T ss_pred EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCc----cHHHHHHHHHhcccccccccccchHHhhhhcccccccc
Confidence 99999999999999999999999999999999876431 11111110000 0000111 11111110000
Q ss_pred CCCCCCCCCCCCccccCCCCCCcccccccc-----cc--cccCCcccCC----CCCcchhc--hhHHhhhc-CCCceEEE
Q 045862 152 LPKGKGYGQPPDAIIALPGWLSDEDVNTTR-----PI--GTNYCDLTSV----CGVKEYIH--KGEFRRDV-PLLEEITI 217 (271)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~i~~P----~G~~D~~~--~~~~~~~~-~~~~~~~~ 217 (271)
.. ..+..+.++ ...........+..|. +. ........|| .|+..+.. ...+...+ |..+++..
T Consensus 176 ~~-n~Dlv~~yr--~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~vv~~ns~Ldp~~ttllk 252 (283)
T PF03096_consen 176 EN-NSDLVQTYR--QHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDVVEMNSKLDPTKTTLLK 252 (283)
T ss_dssp HC-T-HHHHHHH--HHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHHHHHHHHS-CCCEEEEE
T ss_pred cc-cHHHHHHHH--HHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhHHHHHhhcCcccceEEE
Confidence 00 000000000 0000111111111111 11 1111455677 67777663 33444444 44348899
Q ss_pred eCCCCccccccChHHHHHHHHHHHhhh
Q 045862 218 MEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 218 ~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+++||=.+..|+|..+++.+.=|+++.
T Consensus 253 v~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 253 VADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp ETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred ecccCCcccccCcHHHHHHHHHHHccC
Confidence 999999999999999999999999976
No 83
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.52 E-value=2.6e-13 Score=103.86 Aligned_cols=187 Identities=17% Similarity=0.123 Sum_probs=107.7
Q ss_pred hHHHHHHHhhCCCeEEeeCCCCCCCCCCCc------ccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHH
Q 045862 25 WCHQTIALASLSYRAVAPDLSGFGDTDELL------EMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLC 98 (271)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a 98 (271)
|......|+++||.|+.+|.||.+...... ......+++....+..+++...++.+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 456678898999999999999987543221 11223444455555555444333226899999999999999999
Q ss_pred HhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCccccCCCCCCccccc
Q 045862 99 LFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDAIIALPGWLSDEDVN 178 (271)
Q Consensus 99 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (271)
.++|++++++|..++...... .... ... +........... .. ......
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~----~~~~----~~~--~~~~~~~~~~~~-~~---------------------~~~~~~ 130 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFS----YYGT----TDI--YTKAEYLEYGDP-WD---------------------NPEFYR 130 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTC----SBHH----TCC--HHHGHHHHHSST-TT---------------------SHHHHH
T ss_pred cccceeeeeeeccceecchhc----cccc----ccc--cccccccccCcc-ch---------------------hhhhhh
Confidence 999999999999998764411 0000 000 111011110000 00 000000
Q ss_pred ccccccccCCc--ccCC----CCCcchhc--------hhHHhhhcCCCceEEEeCCCCcccc-ccChHHHHHHHHHHHhh
Q 045862 179 TTRPIGTNYCD--LTSV----CGVKEYIH--------KGEFRRDVPLLEEITIMEGVGHFIN-QEKGHQLETEIGTSRGE 243 (271)
Q Consensus 179 ~~~~~~~~~~~--i~~P----~G~~D~~~--------~~~~~~~~~~~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 243 (271)
.. ........ ++.| +|++|..+ .+.+.+.-... ++++++++||.+. .++..+..+.+.+|+++
T Consensus 131 ~~-s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~-~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 131 EL-SPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPV-ELLIFPGEGHGFGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp HH-HHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSE-EEEEETT-SSSTTSHHHHHHHHHHHHHHHHH
T ss_pred hh-ccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCE-EEEEcCcCCCCCCCchhHHHHHHHHHHHHHH
Confidence 00 00011122 5667 89999774 23444444456 9999999999554 56667888999999987
Q ss_pred hh
Q 045862 244 KK 245 (271)
Q Consensus 244 ~~ 245 (271)
.-
T Consensus 209 ~l 210 (213)
T PF00326_consen 209 YL 210 (213)
T ss_dssp HT
T ss_pred Hc
Confidence 63
No 84
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.50 E-value=1.5e-13 Score=100.07 Aligned_cols=197 Identities=12% Similarity=0.074 Sum_probs=125.5
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHH-HHHHHHhCCCCCceEEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDL-IGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l-~~~l~~l~~~~~~~~lv 85 (271)
+.|+++++|+..++....-+++..+-. -+.+|+.+++||+|.|+..+.....-+ -++.+ ..+..+-..++.+++|.
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~l--Ds~avldyl~t~~~~dktkivlf 154 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKL--DSEAVLDYLMTRPDLDKTKIVLF 154 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceec--cHHHHHHHHhcCccCCcceEEEE
Confidence 679999999999998888777766543 378999999999999987763222222 22222 22233334444789999
Q ss_pred EeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCcc
Q 045862 86 GHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDAI 165 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (271)
|-|.||.+|+.+|+...+++.++|+-++..... ......+. .+.-+.+..++....
T Consensus 155 GrSlGGAvai~lask~~~ri~~~ivENTF~SIp----~~~i~~v~-----p~~~k~i~~lc~kn~--------------- 210 (300)
T KOG4391|consen 155 GRSLGGAVAIHLASKNSDRISAIIVENTFLSIP----HMAIPLVF-----PFPMKYIPLLCYKNK--------------- 210 (300)
T ss_pred ecccCCeeEEEeeccchhheeeeeeechhccch----hhhhheec-----cchhhHHHHHHHHhh---------------
Confidence 999999999999999999999999999876431 00000000 001111111111100
Q ss_pred ccCCCCCCcccccccccccccCCcccCC----CCCcchhc----hhHHhhhcCCC-ceEEEeCCCCccccccChHHHHHH
Q 045862 166 IALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH----KGEFRRDVPLL-EEITIMEGVGHFINQEKGHQLETE 236 (271)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~----~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~ 236 (271)
|.+...+ .+.++| .|..|.++ .+.+-+..+.. +++..||++.|.=-+- .+-..++
T Consensus 211 -----~~S~~ki----------~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~ 274 (300)
T KOG4391|consen 211 -----WLSYRKI----------GQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQA 274 (300)
T ss_pred -----hcchhhh----------ccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHH
Confidence 0000000 123455 78999775 44555555544 4889999999975553 4567789
Q ss_pred HHHHHhhhhh
Q 045862 237 IGTSRGEKKQ 246 (271)
Q Consensus 237 i~~fl~~~~~ 246 (271)
|.+||.+...
T Consensus 275 i~dFlaE~~~ 284 (300)
T KOG4391|consen 275 IEDFLAEVVK 284 (300)
T ss_pred HHHHHHHhcc
Confidence 9999998754
No 85
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=2.2e-13 Score=107.62 Aligned_cols=117 Identities=12% Similarity=0.078 Sum_probs=88.8
Q ss_pred CcccccCC-----CceEEEEeccCCCccchHH-------HHHHH-------hhCCCeEEeeCCCCCC-CCCCCcc-----
Q 045862 1 MHVAEKGQ-----GPEILFLYVFPELRYSWCH-------QTIAL-------ASLSYRAVAPDLSGFG-DTDELLE----- 55 (271)
Q Consensus 1 l~y~~~g~-----~~~vlllHG~~~~~~~~~~-------~~~~l-------~~~g~~vi~~D~~G~G-~S~~~~~----- 55 (271)
|.|+.+|. ...||++|++.+++..... .++.| ...-|-||+.|..|.. .|+.|..
T Consensus 38 vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g 117 (368)
T COG2021 38 VAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGG 117 (368)
T ss_pred EEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCC
Confidence 45778883 3579999999986544331 23333 2223999999999865 4444431
Q ss_pred ------cCcchHHhHHHHHHHHHHHhCCCCCceE-EEEeChhhHHHHHHHHhhccccceEEEeecCCCCCC
Q 045862 56 ------MTSYTCFHVIGDLIGLIDLVAPNDEKMF-VVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNT 119 (271)
Q Consensus 56 ------~~~~~~~~~~~~l~~~l~~l~~~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 119 (271)
+-.+++.+++..-..++++||+ +++. +||-||||+.|+.++..||++|.+++.+++.....+
T Consensus 118 ~~yg~~FP~~ti~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~ 186 (368)
T COG2021 118 KPYGSDFPVITIRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSA 186 (368)
T ss_pred CccccCCCcccHHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCH
Confidence 1246889999888999999999 8876 999999999999999999999999999998776543
No 86
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.45 E-value=2.2e-13 Score=118.20 Aligned_cols=106 Identities=15% Similarity=0.144 Sum_probs=83.3
Q ss_pred CCceEEEEeccCCCcc---ch-HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC---CCC
Q 045862 8 QGPEILFLYVFPELRY---SW-CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP---NDE 80 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~---~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~ 80 (271)
+.|+||++||++.+.. .+ ......|.++||.|+++|+||+|.|.... ..++ ...++|+.++++.+.. .++
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~--~~~~-~~~~~D~~~~i~~l~~q~~~~~ 97 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF--DLLG-SDEAADGYDLVDWIAKQPWCDG 97 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce--EecC-cccchHHHHHHHHHHhCCCCCC
Confidence 3589999999997653 22 23456788889999999999999998654 2233 5677888888877632 125
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 98 ~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 98 NVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred cEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 899999999999999999999999999998887654
No 87
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.45 E-value=1.2e-12 Score=114.96 Aligned_cols=199 Identities=18% Similarity=0.153 Sum_probs=120.8
Q ss_pred ceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCCCC---C---cccCcchHHhHHHHHHHHHHHhCCC-CC
Q 045862 10 PEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDTDE---L---LEMTSYTCFHVIGDLIGLIDLVAPN-DE 80 (271)
Q Consensus 10 ~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~---~---~~~~~~~~~~~~~~l~~~l~~l~~~-~~ 80 (271)
|.||++||.+..... |...+..|+.+||.|+.++.||-+.-.. . ..+....++++.+.+. ++...+.- .+
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 789999999865544 6778889999999999999997543211 1 1223345666666666 45444331 25
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPKGKGYGQ 160 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (271)
++.+.|||+||.+++.++.+.| .+++.+...+.... ...+.... . .. .........
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~--------~~~~~~~~-~-------~~-~~~~~~~~~------ 529 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDW--------LLYFGEST-E-------GL-RFDPEENGG------ 529 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchh--------hhhccccc-h-------hh-cCCHHHhCC------
Confidence 8999999999999999999888 66666655554321 00000000 0 00 000000000
Q ss_pred CCCccccCCCCCCcccccccccccccC-CcccCC----CCCcchhc--------hhHHhhhcCCCceEEEeCCCCccccc
Q 045862 161 PPDAIIALPGWLSDEDVNTTRPIGTNY-CDLTSV----CGVKEYIH--------KGEFRRDVPLLEEITIMEGVGHFINQ 227 (271)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~P----~G~~D~~~--------~~~~~~~~~~~~~~~~~~~~gH~~~~ 227 (271)
...+ ..+.+.. ..++.+ .++++| ||.+|..+ .+.+++.-.+. +++++|+.||.+.-
T Consensus 530 -------~~~~-~~~~~~~--~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~-~~~~~p~e~H~~~~ 598 (620)
T COG1506 530 -------GPPE-DREKYED--RSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPV-ELVVFPDEGHGFSR 598 (620)
T ss_pred -------Cccc-ChHHHHh--cChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceE-EEEEeCCCCcCCCC
Confidence 0000 0000000 222222 678899 99999664 23344444455 99999999998765
Q ss_pred -cChHHHHHHHHHHHhhh
Q 045862 228 -EKGHQLETEIGTSRGEK 244 (271)
Q Consensus 228 -e~p~~~~~~i~~fl~~~ 244 (271)
++-..+.+.+.+|+.+.
T Consensus 599 ~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 599 PENRVKVLKEILDWFKRH 616 (620)
T ss_pred chhHHHHHHHHHHHHHHH
Confidence 66777888888898876
No 88
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.44 E-value=9.4e-13 Score=110.89 Aligned_cols=102 Identities=10% Similarity=0.078 Sum_probs=84.6
Q ss_pred CceEEEEeccCCCccch-----HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh----CCCC
Q 045862 9 GPEILFLYVFPELRYSW-----CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----APND 79 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~ 79 (271)
++|||++|.+-....+| +.++++|.++||+|+++|+++-+... ...+++++++.+.+.++.. |.
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~-- 287 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGS-- 287 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCC--
Confidence 57999999998777777 58999999999999999999866553 3567777777776666654 56
Q ss_pred CceEEEEeChhhHHHHH----HHHhhcc-ccceEEEeecCCCC
Q 045862 80 EKMFVVGHDSGTYMACF----LCLFRAN-RIKALVNLSVVFNP 117 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~ 117 (271)
++++++|||+||.+++. +++++++ +|++++++.++...
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 78999999999999986 7888886 89999999987765
No 89
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.41 E-value=3.9e-11 Score=88.63 Aligned_cols=89 Identities=25% Similarity=0.305 Sum_probs=69.0
Q ss_pred eEEEEeccCCCccchHH--HHHHHhhCC--CeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 11 EILFLYVFPELRYSWCH--QTIALASLS--YRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~--~~~~l~~~g--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
.|++|||+.++....+. +.+.+++.+ .+++++|++ ...+...+.+.++++.... +.+.|||
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~--~~~~liG 65 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKP--ENVVLIG 65 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCC--CCeEEEE
Confidence 37999999998888764 345666543 567777766 3455677888889988876 6799999
Q ss_pred eChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 87 HDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.||||..|..+|.+++ +++ |+++|...+
T Consensus 66 SSlGG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 66 SSLGGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred EChHHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 9999999999999885 444 999988743
No 90
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.41 E-value=1.9e-12 Score=105.97 Aligned_cols=102 Identities=11% Similarity=0.073 Sum_probs=85.4
Q ss_pred ceEEEEeccCCCccch-HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 10 PEILFLYVFPELRYSW-CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
|+||++..+.+..... +.+++.|.+ |++|+..||..-+...... ..++++++++-|.+.++++|. + ++++|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~~l~~~i~~~G~--~-v~l~GvC 176 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA--GKFDLEDYIDYLIEFIRFLGP--D-IHVIAVC 176 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc--CCCCHHHHHHHHHHHHHHhCC--C-CcEEEEc
Confidence 7999999998766554 678899999 9999999998776554333 578999999999999999987 6 9999999
Q ss_pred hhhHHHHHHHHhh-----ccccceEEEeecCCCC
Q 045862 89 SGTYMACFLCLFR-----ANRIKALVNLSVVFNP 117 (271)
Q Consensus 89 ~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~ 117 (271)
+||..++.+++.+ |.+++++++++++...
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 9999988777765 6679999999998876
No 91
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.40 E-value=8.1e-12 Score=95.57 Aligned_cols=110 Identities=13% Similarity=0.105 Sum_probs=74.6
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhh--------CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh---C
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALAS--------LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV---A 76 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~--------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~ 76 (271)
+|.+||||||..++...|+.+...+.+ ..++++++|+......-.... -....+...+.+..+++.+ .
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~-l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT-LQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc-HHHHHHHHHHHHHHHHHhhhhcc
Confidence 478999999999999998888766621 147899999876532211110 0111223334445555545 1
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhc---cccceEEEeecCCCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRA---NRIKALVNLSVVFNPN 118 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~ 118 (271)
...++++||||||||.+|..++...+ +.|+.+|.+++|....
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 11278999999999999998887643 4799999999887653
No 92
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.39 E-value=9e-13 Score=83.08 Aligned_cols=64 Identities=20% Similarity=0.204 Sum_probs=56.2
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLID 73 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~ 73 (271)
+.+|+++||++..+..|..+++.|+++||.|+++|+||||.|+.... ..-+++++++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 45899999999999999999999999999999999999999986442 34578899999988763
No 93
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.38 E-value=1.2e-11 Score=94.73 Aligned_cols=107 Identities=21% Similarity=0.194 Sum_probs=63.7
Q ss_pred CceEEEEeccCCCccchHHHHHH-HhhCCCeEEeeCCCC------CCC---C-----CCCcc--cCcchHHhHHHHHHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIA-LASLSYRAVAPDLSG------FGD---T-----DELLE--MTSYTCFHVIGDLIGL 71 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~-l~~~g~~vi~~D~~G------~G~---S-----~~~~~--~~~~~~~~~~~~l~~~ 71 (271)
.+.|||+||+|.+...|..+... +.....+++.++-|- .|. + ..... .....+...++.+.++
T Consensus 14 ~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~l 93 (216)
T PF02230_consen 14 KPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDEL 93 (216)
T ss_dssp SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHHH
Confidence 57999999999999777766552 222246677665431 122 1 00000 0123344455555555
Q ss_pred HHHh---CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 72 IDLV---APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 72 l~~l---~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
++.. +++.++++|+|+|.||++|+.++.++|+.+.++|.+++..
T Consensus 94 i~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 94 IDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---
T ss_pred HHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc
Confidence 5532 3433689999999999999999999999999999999765
No 94
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.38 E-value=8e-12 Score=95.94 Aligned_cols=105 Identities=24% Similarity=0.176 Sum_probs=70.9
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCC-CCCCcccCcc--------hHHhHHHHHHHHHHHhCCC
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGD-TDELLEMTSY--------TCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~-S~~~~~~~~~--------~~~~~~~~l~~~l~~l~~~ 78 (271)
+.|.||++|++.+-....+.+++.|+++||.|+++|+-+-.. .......... ..+....++...++.+.-.
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 458999999999888888899999999999999999754333 1111100001 1245667776666665321
Q ss_pred ----CCceEEEEeChhhHHHHHHHHhhccccceEEEeec
Q 045862 79 ----DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 79 ----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
.+++.++|+||||.+++.+|.+. +.+++.|..-+
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 15899999999999999999887 57888877665
No 95
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.32 E-value=2.3e-11 Score=95.58 Aligned_cols=108 Identities=19% Similarity=0.230 Sum_probs=91.9
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhC---CCeEEeeCCCCCCCCCCCc----ccCcchHHhHHHHHHHHHHHhCC----C
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASL---SYRAVAPDLSGFGDTDELL----EMTSYTCFHVIGDLIGLIDLVAP----N 78 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~---g~~vi~~D~~G~G~S~~~~----~~~~~~~~~~~~~l~~~l~~l~~----~ 78 (271)
+.+|||+|.+|-...|..++..|.+. .+.|+++.+.||-.++... +...++++++++--.++++++-. .
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~ 82 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKP 82 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCC
Confidence 46999999999999999999888743 6999999999998776651 23678999999988888877643 3
Q ss_pred CCceEEEEeChhhHHHHHHHHhhc---cccceEEEeecCCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRA---NRIKALVNLSVVFNP 117 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~ 117 (271)
+.+++|+|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 368999999999999999999999 789999999987765
No 96
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.31 E-value=2.7e-11 Score=93.32 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=88.1
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
|||+|+|+.++....|..+...|... ..|+.++.||+|.-.. ...+++++++...+.|...... ++++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~-GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPE-GPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCC-CCEEEEeecc
Confidence 68999999999999999999999997 9999999999986332 3468999999988888877653 7999999999
Q ss_pred hhHHHHHHHHhhc---cccceEEEeecCCC
Q 045862 90 GTYMACFLCLFRA---NRIKALVNLSVVFN 116 (271)
Q Consensus 90 Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 116 (271)
||.+|..+|.+.- +.|..|+++++...
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999998853 46999999998775
No 97
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.30 E-value=7.1e-11 Score=96.07 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=69.6
Q ss_pred ceEEEEeccCCCccchHHH-HHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC-CCCCceEEEEe
Q 045862 10 PEILFLYVFPELRYSWCHQ-TIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA-PNDEKMFVVGH 87 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~-~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~~~lvGh 87 (271)
|+||++-|+-+...++..+ .+.|..+|+.++++|.||.|.|.... ...+.+.+...+...+.... ++..++.++|.
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~--l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~ 268 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP--LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGF 268 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT---S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEE
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCC--CCcCHHHHHHHHHHHHhcCCccChhheEEEEe
Confidence 5677777777777665544 56788899999999999999986443 11222345555555554432 21258999999
Q ss_pred ChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 88 DSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
|+||.+|+.+|..+++|++++|.++++...
T Consensus 269 SfGGy~AvRlA~le~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 269 SFGGYYAVRLAALEDPRLKAVVALGAPVHH 298 (411)
T ss_dssp THHHHHHHHHHHHTTTT-SEEEEES---SC
T ss_pred ccchHHHHHHHHhcccceeeEeeeCchHhh
Confidence 999999999999999999999999987643
No 98
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.30 E-value=1.7e-11 Score=117.27 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=89.2
Q ss_pred CCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 7 GQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
|++++++|+||++++...|..+.+.|... ++|+++|.+|+|.+.. ..++++++++++.+.++.+... ++++++|
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~-~p~~l~G 1139 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPH-GPYHLLG 1139 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCC-CCEEEEE
Confidence 45689999999999999999999999875 9999999999986632 3589999999999999887642 5899999
Q ss_pred eChhhHHHHHHHHh---hccccceEEEeecCC
Q 045862 87 HDSGTYMACFLCLF---RANRIKALVNLSVVF 115 (271)
Q Consensus 87 hS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 115 (271)
|||||.+|..+|.+ .++++..++++++..
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999999999986 467899999998644
No 99
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.26 E-value=3.3e-10 Score=81.42 Aligned_cols=103 Identities=15% Similarity=0.202 Sum_probs=67.2
Q ss_pred CceEEEEeccC-----CCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceE
Q 045862 9 GPEILFLYVFP-----ELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMF 83 (271)
Q Consensus 9 ~~~vlllHG~~-----~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 83 (271)
.|..|++|.-+ .+...-..+...|.++||.++.+|+||.|.|....+..---.++... +.+++.........+.
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~a-aldW~~~~hp~s~~~~ 106 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAA-ALDWLQARHPDSASCW 106 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHH-HHHHHHhhCCCchhhh
Confidence 35677777543 33444667778889999999999999999998876422222333322 2233333332112346
Q ss_pred EEEeChhhHHHHHHHHhhccccceEEEeec
Q 045862 84 VVGHDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
|.|+|+|++|++.+|.+.|+ ...++-+.+
T Consensus 107 l~GfSFGa~Ia~~la~r~~e-~~~~is~~p 135 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE-ILVFISILP 135 (210)
T ss_pred hcccchHHHHHHHHHHhccc-ccceeeccC
Confidence 89999999999999999876 333333333
No 100
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.26 E-value=9.5e-11 Score=85.63 Aligned_cols=88 Identities=16% Similarity=0.118 Sum_probs=62.6
Q ss_pred EEEEeccCCCc-cchHHHH-HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 12 ILFLYVFPELR-YSWCHQT-IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 12 vlllHG~~~~~-~~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
|++|||++++. ..|.... ..|... ++|-.+++ ..-+++++...+.+.+.... ++++|||||+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------------~~P~~~~W~~~l~~~i~~~~---~~~ilVaHSL 64 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------------DNPDLDEWVQALDQAIDAID---EPTILVAHSL 64 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------------TS--HHHHHHHHHHCCHC-T---TTEEEEEETH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------------CCCCHHHHHHHHHHHHhhcC---CCeEEEEeCH
Confidence 68999999875 4577665 456665 78887776 12356788888877777553 5799999999
Q ss_pred hhHHHHHHH-HhhccccceEEEeecCC
Q 045862 90 GTYMACFLC-LFRANRIKALVNLSVVF 115 (271)
Q Consensus 90 Gg~ia~~~a-~~~p~~v~~lvl~~~~~ 115 (271)
|+..++.++ .....+|.+++|++++.
T Consensus 65 Gc~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 65 GCLTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHHHHHTCCSSEEEEEEES--S
T ss_pred HHHHHHHHHhhcccccccEEEEEcCCC
Confidence 999999999 66778999999999875
No 101
>COG0400 Predicted esterase [General function prediction only]
Probab=99.25 E-value=2.5e-10 Score=85.47 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=76.7
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCC--CCCC---------CCCcccCcchHHhHHHHHHHHHHHhCC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSG--FGDT---------DELLEMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G--~G~S---------~~~~~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
.|+||++||+|++..++-++...+..+ ++++.+-=+- .|.- ...........+.+++.+..+.+++++
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999998877777664 6666553211 1100 000001122445566667777777777
Q ss_pred CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 78 NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 78 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+-++++++|+|-||++++.+..++|+.++++|++++....
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~ 136 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPL 136 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCC
Confidence 5478999999999999999999999999999999987643
No 102
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.24 E-value=5.4e-11 Score=91.15 Aligned_cols=108 Identities=29% Similarity=0.322 Sum_probs=77.7
Q ss_pred cCCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH-hC----CCCC
Q 045862 6 KGQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL-VA----PNDE 80 (271)
Q Consensus 6 ~g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~-l~----~~~~ 80 (271)
.|.-|.|||+||+......|..++++++..||-|+.+|+...+...... ......++++.+.+=++. +. .+-.
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhcccccccccc
Confidence 3456999999999988888999999999999999999966543321111 122333333433332221 11 1115
Q ss_pred ceEEEEeChhhHHHHHHHHhh-----ccccceEEEeecCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFR-----ANRIKALVNLSVVF 115 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~ 115 (271)
++.|.|||-||-+|..++..+ +.+++++++++|..
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 899999999999999999987 56899999999876
No 103
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.24 E-value=9.3e-10 Score=84.89 Aligned_cols=105 Identities=24% Similarity=0.270 Sum_probs=80.1
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCC-CCCCCCCccc----C-----cchHHhHHHHHHHHHHHhC---
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSG-FGDTDELLEM----T-----SYTCFHVIGDLIGLIDLVA--- 76 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G-~G~S~~~~~~----~-----~~~~~~~~~~l~~~l~~l~--- 76 (271)
|.||++|++.+-....+.+++.|+..||.|+++|+-+ .|.+...... . ..+..+...|+...++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 7899999999999999999999999999999999876 3433322210 0 1223677788888887763
Q ss_pred -CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 77 -PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 77 -~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
.+.+++.++|+||||.+++.++.+.| .|++.+..-+..
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~ 146 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGL 146 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCC
Confidence 21257999999999999999999887 677777666544
No 104
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.20 E-value=8.3e-11 Score=98.01 Aligned_cols=96 Identities=14% Similarity=0.185 Sum_probs=75.9
Q ss_pred CCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHH
Q 045862 20 ELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~ 99 (271)
.....|..+++.|.+.||.+ ..|++|+|.+-+........++++.+.++++.++.+. .+++|+||||||.+++.++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~--~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG--KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECHhHHHHHHHHH
Confidence 45578999999999998765 8999999988665421233456666666677677777 89999999999999999999
Q ss_pred hhcc----ccceEEEeecCCCCC
Q 045862 100 FRAN----RIKALVNLSVVFNPN 118 (271)
Q Consensus 100 ~~p~----~v~~lvl~~~~~~~~ 118 (271)
.+|+ .|+++|.++++....
T Consensus 182 ~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HCCHhHHhHhccEEEECCCCCCC
Confidence 8886 378999999887654
No 105
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.15 E-value=6.2e-10 Score=89.58 Aligned_cols=107 Identities=17% Similarity=0.151 Sum_probs=68.1
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCc-----------------c-cCcchHHhHHHHHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELL-----------------E-MTSYTCFHVIGDLIG 70 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----------------~-~~~~~~~~~~~~l~~ 70 (271)
-|.||..||.++....|...+. ++..||-|+.+|.||+|..+... + ...+-+..+..|+..
T Consensus 83 ~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 83 LPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp EEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred cCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 3789999999999888877655 55669999999999999322111 0 112233445556665
Q ss_pred HHHHhC----CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 71 LIDLVA----PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 71 ~l~~l~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.++.+. ++.+++.+.|.|.||.+++.+|+..+ +|++++...|....
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD 211 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc
Confidence 555542 22258999999999999999999775 69999988876543
No 106
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.15 E-value=1.8e-10 Score=92.68 Aligned_cols=107 Identities=11% Similarity=0.043 Sum_probs=87.3
Q ss_pred CceEEEEeccCCCccch-----HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceE
Q 045862 9 GPEILFLYVFPELRYSW-----CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMF 83 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~-----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 83 (271)
++|+|++|.+-.....| +.++..|.++|+.|+.+|+++=..+.......+|-.+.+.+.+..+.+..+. +++.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~--~~In 184 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQ--KDIN 184 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCc--cccc
Confidence 47899999998877776 4678999999999999999976655543333445556666777777777888 8999
Q ss_pred EEEeChhhHHHHHHHHhhccc-cceEEEeecCCCC
Q 045862 84 VVGHDSGTYMACFLCLFRANR-IKALVNLSVVFNP 117 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~ 117 (271)
++|+|.||.++..+++.++.+ |++++++.++...
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhh
Confidence 999999999999999999987 9999999987765
No 107
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.14 E-value=7e-11 Score=87.99 Aligned_cols=101 Identities=13% Similarity=0.093 Sum_probs=65.0
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCC-CCCCCCcccCcchHHhHHHHHHHHHHHh---CCCCCceEE
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGF-GDTDELLEMTSYTCFHVIGDLIGLIDLV---APNDEKMFV 84 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~l 84 (271)
.++||+-+|++.....|..++.+|+..||+|+.||...| |.|+..- ..+++....+++..+++.+ |. .++-|
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms~g~~sL~~V~dwl~~~g~--~~~GL 105 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMSIGKASLLTVIDWLATRGI--RRIGL 105 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HHHHHHHHHHHHHHHHHTT-----EEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchHHhHHHHHHHHHHHHhcCC--Ccchh
Confidence 479999999999999999999999999999999998776 8888776 6789988888888777665 67 78999
Q ss_pred EEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 85 VGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
+.-|+.|.||+..|++. .+.-+|..-+..
T Consensus 106 IAaSLSaRIAy~Va~~i--~lsfLitaVGVV 134 (294)
T PF02273_consen 106 IAASLSARIAYEVAADI--NLSFLITAVGVV 134 (294)
T ss_dssp EEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred hhhhhhHHHHHHHhhcc--CcceEEEEeeee
Confidence 99999999999999853 466666665543
No 108
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.13 E-value=3.6e-09 Score=84.04 Aligned_cols=224 Identities=11% Similarity=-0.025 Sum_probs=124.3
Q ss_pred CceEEEEeccCCCccchH-HH-HHHHhhCCCeEEeeCCCCCCCCCCCcccC--cchHH----------hHHHHHHHHHHH
Q 045862 9 GPEILFLYVFPELRYSWC-HQ-TIALASLSYRAVAPDLSGFGDTDELLEMT--SYTCF----------HVIGDLIGLIDL 74 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~-~~-~~~l~~~g~~vi~~D~~G~G~S~~~~~~~--~~~~~----------~~~~~l~~~l~~ 74 (271)
+|.+|.++|.|......+ .+ +..|.++|+..+.+..|-||...+..... -.++. .-+..|..+++.
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~ 171 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER 171 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh
Confidence 577888888888665443 23 56777779999999999999876554211 01111 122334455555
Q ss_pred hCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhh-hhHHHHHHHHHhhhCCCCCCCC
Q 045862 75 VAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQ-ISTEIVIKEFLTLWTPDPIILP 153 (271)
Q Consensus 75 l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 153 (271)
.|. .++.+.|.||||.+|...|+..|..+..+-++++......-. ...+.. .....+.+. +...........
T Consensus 172 ~G~--~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt----~Gvls~~i~W~~L~~q-~~~~~~~~~~~~ 244 (348)
T PF09752_consen 172 EGY--GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFT----EGVLSNSINWDALEKQ-FEDTVYEEEISD 244 (348)
T ss_pred cCC--CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchh----hhhhhcCCCHHHHHHH-hcccchhhhhcc
Confidence 577 899999999999999999999999887777776543221100 111111 112222222 111000000000
Q ss_pred CCCCCCCCCCccccCCCCCCcccccccc---cccccCCcccCC---------CCCcchhc----hhHHhhhcCCCceEEE
Q 045862 154 KGKGYGQPPDAIIALPGWLSDEDVNTTR---PIGTNYCDLTSV---------CGVKEYIH----KGEFRRDVPLLEEITI 217 (271)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~P---------~G~~D~~~----~~~~~~~~~~~~~~~~ 217 (271)
....... .............+.+.... ....+.....+| .+++|..+ ...+++..|++ +++.
T Consensus 245 ~~~~~~~-~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGs-EvR~ 322 (348)
T PF09752_consen 245 IPAQNKS-LPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGS-EVRY 322 (348)
T ss_pred cccCccc-ccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCC-eEEE
Confidence 0000000 00000001111111111111 122222334444 78888664 44899999999 9999
Q ss_pred eCCCCccc-cccChHHHHHHHHHHHh
Q 045862 218 MEGVGHFI-NQEKGHQLETEIGTSRG 242 (271)
Q Consensus 218 ~~~~gH~~-~~e~p~~~~~~i~~fl~ 242 (271)
+++ ||.- .+-+.+.|.+.|.+-++
T Consensus 323 l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 323 LPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred ecC-CcEEEeeechHHHHHHHHHHhh
Confidence 987 9964 66788999999987664
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.11 E-value=1.5e-09 Score=82.96 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=65.8
Q ss_pred EEEEeccCC---CccchHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH---hCCCCCceEE
Q 045862 12 ILFLYVFPE---LRYSWCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL---VAPNDEKMFV 84 (271)
Q Consensus 12 vlllHG~~~---~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~~~~l 84 (271)
||++||.+. +......++..++. .|+.|+.+|+|=..+.. ....+++..+.+..++++ ++.+.++++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----FPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----ccccccccccceeeeccccccccccccceEE
Confidence 799999874 44445666676665 69999999999432221 233455555555555555 2332278999
Q ss_pred EEeChhhHHHHHHHHhhcc----ccceEEEeecCC
Q 045862 85 VGHDSGTYMACFLCLFRAN----RIKALVNLSVVF 115 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 115 (271)
+|+|-||.+++.++.+..+ .++++++++|..
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999987654 389999999865
No 110
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.09 E-value=4.7e-10 Score=84.54 Aligned_cols=108 Identities=26% Similarity=0.204 Sum_probs=79.7
Q ss_pred cCCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-------CCC
Q 045862 6 KGQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV-------APN 78 (271)
Q Consensus 6 ~g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l-------~~~ 78 (271)
.|.-|.|+|+||+.-....|..++.+++.+||-|+++++-.--. ......-.+....++.+..-+.++ ++
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~--p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl- 119 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP--PDGQDEIKSAASVINWLPEGLQHVLPENVEANL- 119 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC--CCchHHHHHHHHHHHHHHhhhhhhCCCCccccc-
Confidence 44568999999999999999999999999999999999875311 111101123444455555544443 34
Q ss_pred CCceEEEEeChhhHHHHHHHHhhc--cccceEEEeecCCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRA--NRIKALVNLSVVFNP 117 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 117 (271)
.++.++|||.||-.|..+|..+. -.+.+||.++|....
T Consensus 120 -~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 120 -SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred -ceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 58999999999999999998774 248899999987654
No 111
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.06 E-value=4.1e-10 Score=85.05 Aligned_cols=88 Identities=11% Similarity=0.106 Sum_probs=53.4
Q ss_pred ceEEEEeccCC-CccchHHHHHHHhhCCCe---EEeeCCCCCCCCCCCccc--CcchHHhHHHHHHHHHHHhCCCCCceE
Q 045862 10 PEILFLYVFPE-LRYSWCHQTIALASLSYR---AVAPDLSGFGDTDELLEM--TSYTCFHVIGDLIGLIDLVAPNDEKMF 83 (271)
Q Consensus 10 ~~vlllHG~~~-~~~~~~~~~~~l~~~g~~---vi~~D~~G~G~S~~~~~~--~~~~~~~~~~~l~~~l~~l~~~~~~~~ 83 (271)
.||||+||.++ ....|..+.+.|+++||. |+++++-....+...... ...+..+++.-|..+++.-+ .+|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG---akVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG---AKVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-----EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC---CEEE
Confidence 58999999999 668899999999999999 899998544332211100 01122344444555554445 4899
Q ss_pred EEEeChhhHHHHHHHHh
Q 045862 84 VVGHDSGTYMACFLCLF 100 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~ 100 (271)
||||||||.++..+...
T Consensus 79 IVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEETCHHHHHHHHHHH
T ss_pred EEEcCCcCHHHHHHHHH
Confidence 99999999999888753
No 112
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.01 E-value=4.1e-09 Score=78.03 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=70.3
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc-cCcchHHhHH-HHHHHHHHHhCC--CCCceEEEE
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE-MTSYTCFHVI-GDLIGLIDLVAP--NDEKMFVVG 86 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~-~~l~~~l~~l~~--~~~~~~lvG 86 (271)
.|++-.+.+.....|++++..++++||.|+++|+||.|.|..... ...+.+.+++ .|+...++.++. .+-+...||
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vg 111 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVG 111 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEee
Confidence 466666677778889999999999999999999999999987652 1235565655 455555554421 225899999
Q ss_pred eChhhHHHHHHHHhhccccceEEEeec
Q 045862 87 HDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
||+||.+.-.+. +++ +..+....+.
T Consensus 112 HS~GGqa~gL~~-~~~-k~~a~~vfG~ 136 (281)
T COG4757 112 HSFGGQALGLLG-QHP-KYAAFAVFGS 136 (281)
T ss_pred ccccceeecccc-cCc-ccceeeEecc
Confidence 999997654444 445 4555444443
No 113
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.01 E-value=6.4e-10 Score=89.75 Aligned_cols=108 Identities=17% Similarity=0.183 Sum_probs=63.2
Q ss_pred CCceEEEEeccCCCc--cchH-HHHHH-Hhh--CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHH----HhCC
Q 045862 8 QGPEILFLYVFPELR--YSWC-HQTIA-LAS--LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLID----LVAP 77 (271)
Q Consensus 8 ~~~~vlllHG~~~~~--~~~~-~~~~~-l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~----~l~~ 77 (271)
+.|++|++|||..+. ..|. .+.+. |.. .+++||++||...-...-.. ...........|..+|. ..++
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~--a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQ--AVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHH--HHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccc--hhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 468999999999877 4454 44443 444 47999999996322111000 11123333333333333 3344
Q ss_pred CCCceEEEEeChhhHHHHHHHHhhcc--ccceEEEeecCCCC
Q 045862 78 NDEKMFVVGHDSGTYMACFLCLFRAN--RIKALVNLSVVFNP 117 (271)
Q Consensus 78 ~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 117 (271)
+-++++|||||+||.||-.++..... +|..++.++|..+.
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 22789999999999999999988877 89999999986543
No 114
>PRK10115 protease 2; Provisional
Probab=99.01 E-value=1e-08 Score=91.11 Aligned_cols=110 Identities=11% Similarity=0.126 Sum_probs=83.7
Q ss_pred CCCceEEEEeccCCCcc--chHHHHHHHhhCCCeEEeeCCCCCCCCCCCc------ccCcchHHhHHHHHHHHHHHhCCC
Q 045862 7 GQGPEILFLYVFPELRY--SWCHQTIALASLSYRAVAPDLSGFGDTDELL------EMTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
|+.|.||++||..+.+. .|......|.++||-|+.++.||-|.=.... .....+++++++.+..+++.--.+
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d 522 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGS 522 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 34589999999887664 4767677888899999999999976543221 112356777777777776552222
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
.+++.+.|.|.||.++..++.++|++++++|...+...
T Consensus 523 ~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 523 PSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred hHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 26899999999999999999999999999999887653
No 115
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.00 E-value=5.4e-09 Score=76.00 Aligned_cols=98 Identities=18% Similarity=0.073 Sum_probs=77.9
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh----CCCCCceEEE
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----APNDEKMFVV 85 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~~lv 85 (271)
..+||+.|=++....=..+++.|+++|+.|+.+|-+-|=++. -+.++.+.|+..++++. +. ++++|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-------rtP~~~a~Dl~~~i~~y~~~w~~--~~vvLi 73 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE-------RTPEQTAADLARIIRHYRARWGR--KRVVLI 73 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh-------CCHHHHHHHHHHHHHHHHHHhCC--ceEEEE
Confidence 357888888887766678899999999999999977554443 35567777777777664 55 799999
Q ss_pred EeChhhHHHHHHHHhhc----cccceEEEeecCCC
Q 045862 86 GHDSGTYMACFLCLFRA----NRIKALVNLSVVFN 116 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~~~ 116 (271)
|+|+|+-|.-....+.| ++|..++|+++...
T Consensus 74 GYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 74 GYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred eecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 99999988888888777 47899999998653
No 116
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.98 E-value=3.7e-09 Score=82.73 Aligned_cols=97 Identities=15% Similarity=0.188 Sum_probs=61.1
Q ss_pred ceEEEEeccCCC---ccchHHHHHHHhhCCCeEEeeCCC----CCCCCCCCcccCcchHHhHHHHHHHHHHHh-------
Q 045862 10 PEILFLYVFPEL---RYSWCHQTIALASLSYRAVAPDLS----GFGDTDELLEMTSYTCFHVIGDLIGLIDLV------- 75 (271)
Q Consensus 10 ~~vlllHG~~~~---~~~~~~~~~~l~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l------- 75 (271)
..||||-|++.. ......+++.|...||.|+-+-++ |+|- .+++.-++||.++++.+
T Consensus 34 ~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~---------~SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 34 NALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT---------SSLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHHHHHHHHHHS---
T ss_pred cEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc---------chhhhHHHHHHHHHHHHHHhhccc
Confidence 479999999763 344678888898778999999865 4543 34555555555555543
Q ss_pred -CCCCCceEEEEeChhhHHHHHHHHhhc-----cccceEEEeecCCCC
Q 045862 76 -APNDEKMFVVGHDSGTYMACFLCLFRA-----NRIKALVNLSVVFNP 117 (271)
Q Consensus 76 -~~~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~ 117 (271)
+. ++++|+|||.|..-+++++.... ..|.+.||-+|....
T Consensus 105 ~~~--~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR 150 (303)
T PF08538_consen 105 FGR--EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR 150 (303)
T ss_dssp -----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T
T ss_pred cCC--ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh
Confidence 24 68999999999999999998752 569999999987644
No 117
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.98 E-value=1.1e-08 Score=71.39 Aligned_cols=108 Identities=18% Similarity=0.097 Sum_probs=81.5
Q ss_pred CCCc-eEEEEeccCCC--ccchHHHHHHHhhCCCeEEeeCCCCCCCCC----CCcccCcchHHhHHHHHHHHHHHhCCCC
Q 045862 7 GQGP-EILFLYVFPEL--RYSWCHQTIALASLSYRAVAPDLSGFGDTD----ELLEMTSYTCFHVIGDLIGLIDLVAPND 79 (271)
Q Consensus 7 g~~~-~vlllHG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~----~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 79 (271)
|+.| +||+-||.+.+ +.....++..|+.+|+.|..|+++-.-... +++.....-...+...+.++...+..
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~-- 88 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE-- 88 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC--
Confidence 3444 79999999875 455888999999999999999987543221 12211233445677777788877766
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
++.++-|+||||.++..+|......|.+|++++-+..
T Consensus 89 gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh 125 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH 125 (213)
T ss_pred CceeeccccccchHHHHHHHhhcCCcceEEEecCccC
Confidence 7999999999999999999887667999999995543
No 118
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.97 E-value=7.4e-09 Score=80.24 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=71.1
Q ss_pred CceEEEEeccCCCccchHHHHHHHh-hCCC--eEEe--eCCCCC----CCCC---CCc-------ccCcchHHhHHHHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALA-SLSY--RAVA--PDLSGF----GDTD---ELL-------EMTSYTCFHVIGDLI 69 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~-~~g~--~vi~--~D~~G~----G~S~---~~~-------~~~~~~~~~~~~~l~ 69 (271)
..|.|||||++++...+..++..+. +.|. .++. ++--|. |.=. ..+ +....+....+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4689999999999999999999997 6543 3333 333332 2111 111 111246778888888
Q ss_pred HHHHHh----CCCCCceEEEEeChhhHHHHHHHHhhcc-----ccceEEEeecCCCC
Q 045862 70 GLIDLV----APNDEKMFVVGHDSGTYMACFLCLFRAN-----RIKALVNLSVVFNP 117 (271)
Q Consensus 70 ~~l~~l----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 117 (271)
.++..| ++ +++.+|||||||.+++.++..+.. ++.++|.|++++..
T Consensus 91 ~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 91 KVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 777765 67 899999999999999999887532 58999999998765
No 119
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.95 E-value=1.2e-08 Score=77.35 Aligned_cols=108 Identities=16% Similarity=0.081 Sum_probs=74.2
Q ss_pred CceEEEEeccCCCccchHHH--HHHHhhC-CCeEEeeCCCCCCCCCCCcc-------cCcchHHhHHHHHHHHHHHhCCC
Q 045862 9 GPEILFLYVFPELRYSWCHQ--TIALASL-SYRAVAPDLSGFGDTDELLE-------MTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~--~~~l~~~-g~~vi~~D~~G~G~S~~~~~-------~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
.|.||++||.+++...+... +..|+++ ||-|+.++...........+ ...-....++..+..+..+..++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 47899999999998877653 3456664 88899888643211111000 01112233444455555666665
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
..++.+.|+|.||+++..++..+|+.+.++.+.++...
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 57899999999999999999999999999988887653
No 120
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.95 E-value=3.3e-07 Score=74.33 Aligned_cols=104 Identities=15% Similarity=0.014 Sum_probs=71.0
Q ss_pred CceEEEEeccCC---CccchHHHH-HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH---hCCCCCc
Q 045862 9 GPEILFLYVFPE---LRYSWCHQT-IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL---VAPNDEK 81 (271)
Q Consensus 9 ~~~vlllHG~~~---~~~~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~~ 81 (271)
.|.||++||.+. +......++ ..+...|+.|+.+|+|-.-+-. -...+++..+.+..+.++ ++.+.++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-----~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-----FPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-----CCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 689999999873 444453444 4455569999999999544332 223455544444444433 4443378
Q ss_pred eEEEEeChhhHHHHHHHHhhcc----ccceEEEeecCCCC
Q 045862 82 MFVVGHDSGTYMACFLCLFRAN----RIKALVNLSVVFNP 117 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 117 (271)
+.++|+|-||.+++.++..-.+ .....+++.+....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDL 193 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCC
Confidence 9999999999999999987654 46788888887654
No 121
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.94 E-value=2.8e-09 Score=87.88 Aligned_cols=106 Identities=19% Similarity=0.138 Sum_probs=61.7
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCC-CCC---c-----c-------------cCc------c-
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDT-DEL---L-----E-------------MTS------Y- 59 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S-~~~---~-----~-------------~~~------~- 59 (271)
-|.|||-||++++...|..++..|+.+||-|+++|.|-.-.+ ... . . ... +
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 389999999999999999999999999999999999943111 000 0 0 000 0
Q ss_pred ----hHHhHHHHHHHHHHHh--------------------------CCCCCceEEEEeChhhHHHHHHHHhhccccceEE
Q 045862 60 ----TCFHVIGDLIGLIDLV--------------------------APNDEKMFVVGHDSGTYMACFLCLFRANRIKALV 109 (271)
Q Consensus 60 ----~~~~~~~~l~~~l~~l--------------------------~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 109 (271)
-++.-+.++..+++.+ +. +++.++|||+||..++.++.+. .++++.|
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~--~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDL--SRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEE--EEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcch--hheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 1112233344443332 12 4699999999999999888765 6899999
Q ss_pred EeecCCCC
Q 045862 110 NLSVVFNP 117 (271)
Q Consensus 110 l~~~~~~~ 117 (271)
++++-..+
T Consensus 257 ~LD~W~~P 264 (379)
T PF03403_consen 257 LLDPWMFP 264 (379)
T ss_dssp EES---TT
T ss_pred EeCCcccC
Confidence 99986644
No 122
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.94 E-value=2.4e-07 Score=74.62 Aligned_cols=211 Identities=12% Similarity=0.068 Sum_probs=122.3
Q ss_pred CceEEEEeccCC-----CccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH----hCCC
Q 045862 9 GPEILFLYVFPE-----LRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL----VAPN 78 (271)
Q Consensus 9 ~~~vlllHG~~~-----~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~----l~~~ 78 (271)
.|.||++||.|. .+..|..+...++.+ +.-|+.+|+|=--+.. -...+++-.+.+.-+.++ ++.+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-----FPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----CCccchHHHHHHHHHHHhHHHHhCCC
Confidence 478999999873 356688888888554 7889999998543333 334556666666666553 2221
Q ss_pred CCceEEEEeChhhHHHHHHHHhhc------cccceEEEeecCCCCCCCCCcchHHHHh--hhhHHHHHHHHHhhhCCCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRA------NRIKALVNLSVVFNPNTSEPGEIEAEFE--QISTEIVIKEFLTLWTPDPI 150 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 150 (271)
-+++.|+|=|-||.+|..+|.+.- -++++.|++-|................. ..........++..+.++..
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~ 244 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGK 244 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCC
Confidence 168999999999999999887743 4789999999987663222221111111 12223334444444444333
Q ss_pred CCCCCCCCCCCCCccccCCCCCCcccccccccccccCCcccCC-----CCCcchhc------hhHHhhhcCCCceEEEeC
Q 045862 151 ILPKGKGYGQPPDAIIALPGWLSDEDVNTTRPIGTNYCDLTSV-----CGVKEYIH------KGEFRRDVPLLEEITIME 219 (271)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-----~G~~D~~~------~~~~~~~~~~~~~~~~~~ 219 (271)
...... +..-... . ...+.....+| ..+.|.+. .+.+++.--.. ++..++
T Consensus 245 ~~~~~p-~~np~~~--------~---------~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v-~~~~~e 305 (336)
T KOG1515|consen 245 TDLDHP-FINPVGN--------S---------LAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEV-TLIHYE 305 (336)
T ss_pred CCcCCc-ccccccc--------c---------cccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeE-EEEEEC
Confidence 211111 0000000 0 00011123344 45567553 45555555555 777899
Q ss_pred CCCccccccCh-----HHHHHHHHHHHhh
Q 045862 220 GVGHFINQEKG-----HQLETEIGTSRGE 243 (271)
Q Consensus 220 ~~gH~~~~e~p-----~~~~~~i~~fl~~ 243 (271)
++.|.++.-.| .++.+.+.+|+.+
T Consensus 306 ~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 306 DGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred CCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 99997765443 4666777777765
No 123
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.90 E-value=1.3e-08 Score=78.43 Aligned_cols=106 Identities=10% Similarity=0.050 Sum_probs=66.9
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhh-CCC--eEEeeCCCCCCCCCCCcc---cCcchHHhHHHHHHHHHHHhCCCCCc
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALAS-LSY--RAVAPDLSGFGDTDELLE---MTSYTCFHVIGDLIGLIDLVAPNDEK 81 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~-~g~--~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~ 81 (271)
++..+|||||+..+...-..-+..+.. .++ .++.+.||..|....-.. ....+-..+++-|..+.+..+. ++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~--~~ 94 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI--KR 94 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC--ce
Confidence 467999999999886553222222222 223 799999999886432111 0122333344444444333355 79
Q ss_pred eEEEEeChhhHHHHHHHHhhc---------cccceEEEeecCC
Q 045862 82 MFVVGHDSGTYMACFLCLFRA---------NRIKALVNLSVVF 115 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~~p---------~~v~~lvl~~~~~ 115 (271)
++|++||||+.+.+.+..... .++..+|+++|-.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 999999999999998876521 2577888888654
No 124
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.89 E-value=4.5e-09 Score=86.17 Aligned_cols=109 Identities=23% Similarity=0.288 Sum_probs=84.7
Q ss_pred CCCceEEEEeccCCCccchH------HHHHHHhhCCCeEEeeCCCCCCCCCCCc--------ccCcchHHhHH-HHHHHH
Q 045862 7 GQGPEILFLYVFPELRYSWC------HQTIALASLSYRAVAPDLSGFGDTDELL--------EMTSYTCFHVI-GDLIGL 71 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~~~------~~~~~l~~~g~~vi~~D~~G~G~S~~~~--------~~~~~~~~~~~-~~l~~~ 71 (271)
+.+|+|+|.||+.+++..|- .+.-.|+++||+|+.-+.||.--|.... ....+++++++ .||-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 45699999999999999994 4456688999999999999977664322 12345666654 455555
Q ss_pred HHH----hCCCCCceEEEEeChhhHHHHHHHHhhcc---ccceEEEeecCCCC
Q 045862 72 IDL----VAPNDEKMFVVGHDSGTYMACFLCLFRAN---RIKALVNLSVVFNP 117 (271)
Q Consensus 72 l~~----l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~ 117 (271)
++. -+. ++++.||||.|+.+...+++..|+ +|+.+++++|....
T Consensus 151 IdyIL~~T~~--~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 151 IDYILEKTGQ--EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred HHHHHHhccc--cceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 554 355 799999999999999999988875 79999999987744
No 125
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.86 E-value=1.1e-08 Score=77.97 Aligned_cols=158 Identities=18% Similarity=0.129 Sum_probs=79.6
Q ss_pred CCceEEEEeccCCCccchHHHHHHH----hhCCCeEEeeCCCC-----CCCCCC------------Cc-cc--------C
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIAL----ASLSYRAVAPDLSG-----FGDTDE------------LL-EM--------T 57 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l----~~~g~~vi~~D~~G-----~G~S~~------------~~-~~--------~ 57 (271)
.++.||||||++.++..++.....| .+.++.++.+|-|- -|-... +. .+ .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 3678999999999999998766554 44258999888542 111110 00 00 1
Q ss_pred cchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc--------cccceEEEeecCCCCCCCCCcchHHHH
Q 045862 58 SYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA--------NRIKALVNLSVVFNPNTSEPGEIEAEF 129 (271)
Q Consensus 58 ~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p--------~~v~~lvl~~~~~~~~~~~~~~~~~~~ 129 (271)
...+++..+.|.+.++..+. -..|+|+|.||.+|..++.... ..++-+|++++.....+.
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP---FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----------
T ss_pred ccCHHHHHHHHHHHHHhcCC---eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---------
Confidence 22355666666666666552 3579999999999998886532 236778888876533110
Q ss_pred hhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCccccCCCCCCcccccccccccccCCcccCC----CCCcchhc----
Q 045862 130 EQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDAIIALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH---- 201 (271)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~---- 201 (271)
....+ .-..+++| .|.+|.+.
T Consensus 151 --------------------------------------~~~~~-------------~~~~i~iPtlHv~G~~D~~~~~~~ 179 (212)
T PF03959_consen 151 --------------------------------------YQELY-------------DEPKISIPTLHVIGENDPVVPPER 179 (212)
T ss_dssp --------------------------------------GTTTT---------------TT---EEEEEEETT-SSS-HHH
T ss_pred --------------------------------------hhhhh-------------ccccCCCCeEEEEeCCCCCcchHH
Confidence 00000 01346777 89999886
Q ss_pred hhHHhhhcCC-CceEEEeCCCCccccccCh
Q 045862 202 KGEFRRDVPL-LEEITIMEGVGHFINQEKG 230 (271)
Q Consensus 202 ~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p 230 (271)
++.+.+.+.+ . +++..+ +||.++....
T Consensus 180 s~~L~~~~~~~~-~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 180 SEALAEMFDPDA-RVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp HHHHHHHHHHHE-EEEEES-SSSS----HH
T ss_pred HHHHHHhccCCc-EEEEEC-CCCcCcCChh
Confidence 4567777777 6 777776 5999887543
No 126
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.84 E-value=3.5e-08 Score=75.06 Aligned_cols=95 Identities=18% Similarity=0.112 Sum_probs=72.6
Q ss_pred EEeccC--CCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH-hCCCCCceEEEEeChh
Q 045862 14 FLYVFP--ELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL-VAPNDEKMFVVGHDSG 90 (271)
Q Consensus 14 llHG~~--~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~lvGhS~G 90 (271)
++|+.+ ++...|..+...|... +.|+++|.+|++.+.... .+++.+++.+...+.. ... .+++++|||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~--~~~~l~g~s~G 74 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGG--RPFVLVGHSSG 74 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCC--CCeEEEEECHH
Confidence 556544 6777899999999885 999999999998765433 4566677665554443 334 78999999999
Q ss_pred hHHHHHHHHhh---ccccceEEEeecCC
Q 045862 91 TYMACFLCLFR---ANRIKALVNLSVVF 115 (271)
Q Consensus 91 g~ia~~~a~~~---p~~v~~lvl~~~~~ 115 (271)
|.++..++.+. +..+.+++++++..
T Consensus 75 g~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 75 GLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 99999999874 45689999888754
No 127
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.84 E-value=2.4e-08 Score=79.34 Aligned_cols=106 Identities=18% Similarity=0.115 Sum_probs=71.9
Q ss_pred CceEEEEeccCCCccc-hHHH---------HHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh---
Q 045862 9 GPEILFLYVFPELRYS-WCHQ---------TIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV--- 75 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~-~~~~---------~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l--- 75 (271)
-|+||..++++..... .... ...|.++||-|++.|.||.|.|+...... ....++|..++|+.+
T Consensus 20 ~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Q 96 (272)
T PF02129_consen 20 FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQ 96 (272)
T ss_dssp EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHC
T ss_pred ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhC
Confidence 3789999999865411 2111 12388889999999999999998776321 344555555555444
Q ss_pred CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 76 APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 76 ~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
...+++|.++|.|++|.+++.+|+..|..+++++...+....
T Consensus 97 pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 97 PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 333368999999999999999999889999999988775544
No 128
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.83 E-value=1.4e-08 Score=82.68 Aligned_cols=102 Identities=16% Similarity=0.133 Sum_probs=83.8
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCe---EEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYR---AVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
-+++++||++.+...|..+...+...|+. +++++.++.. . ... .....+++..-+.+++...+. +++.|+|
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~--~~~~~~ql~~~V~~~l~~~ga--~~v~Lig 133 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-G-TYS--LAVRGEQLFAYVDEVLAKTGA--KKVNLIG 133 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-C-Ccc--ccccHHHHHHHHHHHHhhcCC--CceEEEe
Confidence 38999999988999999998888877887 9999998761 1 111 234566677777788888887 8999999
Q ss_pred eChhhHHHHHHHHhhc--cccceEEEeecCCCC
Q 045862 87 HDSGTYMACFLCLFRA--NRIKALVNLSVVFNP 117 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~ 117 (271)
|||||.+...++...+ .+|+.++.++++-..
T Consensus 134 HS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 134 HSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 9999999999999988 889999999987755
No 129
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.81 E-value=1.7e-08 Score=76.59 Aligned_cols=108 Identities=18% Similarity=0.228 Sum_probs=77.2
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCc-----c--------------cCcchHHhHHHHH
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELL-----E--------------MTSYTCFHVIGDL 68 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~--------------~~~~~~~~~~~~l 68 (271)
.-|.||--||+++....|.....+-.. ||.|+.+|.||.|.|.... . ...|-+.....|+
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~-Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~ 160 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVA-GYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDA 160 (321)
T ss_pred ccceEEEEeeccCCCCCcccccccccc-ceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHH
Confidence 347899999999999988776665444 8999999999999884311 0 1122233344444
Q ss_pred HHHHHHh----CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 69 IGLIDLV----APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 69 ~~~l~~l----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
..+++.+ .++.+++.+.|.|.||.+++.+++..| ++++++..-|....
T Consensus 161 ~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~d 212 (321)
T COG3458 161 VRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSD 212 (321)
T ss_pred HHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccccc
Confidence 4444433 222378999999999999999988766 78988888776654
No 130
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.76 E-value=2.5e-07 Score=83.08 Aligned_cols=86 Identities=9% Similarity=0.087 Sum_probs=66.2
Q ss_pred HHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC------------------CCCceEEEEeC
Q 045862 27 HQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP------------------NDEKMFVVGHD 88 (271)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~------------------~~~~~~lvGhS 88 (271)
.+.+.|..+||.|+.+|.||.|.|+.... .+. ....+|..++|+.+.- .+++|.++|.|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 34578888999999999999999987652 222 3345565555555531 12799999999
Q ss_pred hhhHHHHHHHHhhccccceEEEeecCC
Q 045862 89 SGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 89 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
+||.+++.+|...|+.++++|.+++..
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 999999999999999999999877654
No 131
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.76 E-value=3e-08 Score=75.81 Aligned_cols=91 Identities=10% Similarity=0.057 Sum_probs=52.9
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhC--CCeEEeeCCCCCCCCCCCc-ccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASL--SYRAVAPDLSGFGDTDELL-EMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
-.|||+||+.++..+|..+.+.+... .+.--.+...++......+ ..-....+.+++.|.+.++.......++++||
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIg 84 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFIG 84 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEEE
Confidence 36999999999999998887777661 1221122222221111111 00112334455555555544443113799999
Q ss_pred eChhhHHHHHHHHh
Q 045862 87 HDSGTYMACFLCLF 100 (271)
Q Consensus 87 hS~Gg~ia~~~a~~ 100 (271)
|||||.|+-.+...
T Consensus 85 HSLGGli~r~al~~ 98 (217)
T PF05057_consen 85 HSLGGLIARYALGL 98 (217)
T ss_pred ecccHHHHHHHHHH
Confidence 99999999766653
No 132
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.69 E-value=1e-07 Score=74.82 Aligned_cols=104 Identities=14% Similarity=0.176 Sum_probs=69.9
Q ss_pred CCCc-eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHH-HHHHHhCCCCCceEE
Q 045862 7 GQGP-EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLI-GLIDLVAPNDEKMFV 84 (271)
Q Consensus 7 g~~~-~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~-~~l~~l~~~~~~~~l 84 (271)
|+|. -|+|.-|..+--+. .++..=.+.||.|+.+++||++.|...+ ...+-...++.+. -.|..|+...+.++|
T Consensus 240 ~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P--~p~n~~nA~DaVvQfAI~~Lgf~~edIil 315 (517)
T KOG1553|consen 240 GNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLP--YPVNTLNAADAVVQFAIQVLGFRQEDIIL 315 (517)
T ss_pred CCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCC--CcccchHHHHHHHHHHHHHcCCCccceEE
Confidence 3454 46666665543322 1122223348999999999999998766 2222223333333 345667764478999
Q ss_pred EEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 85 VGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
.|||.||..+..+|..||+ |+++|+-++.-
T Consensus 316 ygWSIGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 316 YGWSIGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred EEeecCCchHHHHhhcCCC-ceEEEeecchh
Confidence 9999999999999999996 89888877654
No 133
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.69 E-value=1.1e-07 Score=80.73 Aligned_cols=107 Identities=15% Similarity=0.102 Sum_probs=77.7
Q ss_pred CCceEEEEeccCCCccchHHHHH------------------HHhhCCCeEEeeCCC-CCCCCCCCcccCcchHHhHHHHH
Q 045862 8 QGPEILFLYVFPELRYSWCHQTI------------------ALASLSYRAVAPDLS-GFGDTDELLEMTSYTCFHVIGDL 68 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~------------------~l~~~g~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~l 68 (271)
+.|.||+++|.++++..+..+.+ .+.+. .+++.+|.| |+|.|.........+.++.++|+
T Consensus 76 ~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~ 154 (462)
T PTZ00472 76 EAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKADYDHNESEVSEDM 154 (462)
T ss_pred CCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCCCCCChHHHHHHH
Confidence 35899999999998877644321 13333 689999975 88888654422345667888888
Q ss_pred HHHHHHh-------CCCCCceEEEEeChhhHHHHHHHHhhc----------cccceEEEeecCCCC
Q 045862 69 IGLIDLV-------APNDEKMFVVGHDSGTYMACFLCLFRA----------NRIKALVNLSVVFNP 117 (271)
Q Consensus 69 ~~~l~~l-------~~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lvl~~~~~~~ 117 (271)
..+++.. +. .+++|+|||+||.++..+|.+.- =.++++++-++...+
T Consensus 155 ~~~l~~f~~~~p~~~~--~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 155 YNFLQAFFGSHEDLRA--NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHhCccccC--CCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 8888743 33 78999999999999988887641 136788888876654
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.69 E-value=1.4e-07 Score=75.99 Aligned_cols=106 Identities=25% Similarity=0.379 Sum_probs=61.4
Q ss_pred CCceEEEEeccCCCccc--------------h----HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccC---cchHHhH--
Q 045862 8 QGPEILFLYVFPELRYS--------------W----CHQTIALASLSYRAVAPDLSGFGDTDELLEMT---SYTCFHV-- 64 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~--------------~----~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~---~~~~~~~-- 64 (271)
+-|.||++||-++..+. | ..+...|+++||-|+++|.+|+|+........ .++...+
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 34789999997765322 1 23567899999999999999999886544211 1121121
Q ss_pred -------------HHHHHHHHHHhC----CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 65 -------------IGDLIGLIDLVA----PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 65 -------------~~~l~~~l~~l~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
+-|....++-+. ++.+++.++|+||||..++.+|+.. ++|++.|..+..
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 122223444442 1125899999999999999999875 578888877654
No 135
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.68 E-value=2.3e-07 Score=66.11 Aligned_cols=92 Identities=9% Similarity=0.022 Sum_probs=67.7
Q ss_pred ceEEEEeccCCCcc-chHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 10 PEILFLYVFPELRY-SWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 10 ~~vlllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
+.+|++||+.++.. .|....+.-. -.+-.+++. ++..-.++++++.+.+.+... . ++++||+||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~--~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD---------DWEAPVLDDWIARLEKEVNAA-E--GPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC---------CCCCCCHHHHHHHHHHHHhcc-C--CCeEEEEec
Confidence 57899999988764 3766543221 122223322 123457888888888888776 3 679999999
Q ss_pred hhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 89 SGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 89 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
+|+.+++.++.+....|.++++++++..
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCc
Confidence 9999999999988789999999998763
No 136
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.65 E-value=2.1e-06 Score=63.63 Aligned_cols=169 Identities=15% Similarity=0.092 Sum_probs=103.3
Q ss_pred CceEEEEeccCCCccchHH----HHHHHhhCCCeEEeeCCCC----CCCC--CC-------C-------------c-c-c
Q 045862 9 GPEILFLYVFPELRYSWCH----QTIALASLSYRAVAPDLSG----FGDT--DE-------L-------------L-E-M 56 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~----~~~~l~~~g~~vi~~D~~G----~G~S--~~-------~-------------~-~-~ 56 (271)
++.||||||+-.+...|.. +-..|.+. +.++.+|-|- -+.+ .. + . . .
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~ 83 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFT 83 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccc
Confidence 5789999999999988853 34455555 7788887762 0111 00 0 0 0 0
Q ss_pred CcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc------c--ccceEEEeecCCCCCCCCCcchHHH
Q 045862 57 TSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA------N--RIKALVNLSVVFNPNTSEPGEIEAE 128 (271)
Q Consensus 57 ~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p------~--~v~~lvl~~~~~~~~~~~~~~~~~~ 128 (271)
.....++-.+-|...+.+.|. =--|+|.|-|+.++..++.... + .++-+|++++.....
T Consensus 84 ~~~~~eesl~yl~~~i~enGP---FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~---------- 150 (230)
T KOG2551|consen 84 EYFGFEESLEYLEDYIKENGP---FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS---------- 150 (230)
T ss_pred cccChHHHHHHHHHHHHHhCC---CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc----------
Confidence 011334445555666665543 2369999999999999988211 1 246667777654220
Q ss_pred HhhhhHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCccccCCCCCCcccccccccccccCCcccCC----CCCcchhc---
Q 045862 129 FEQISTEIVIKEFLTLWTPDPIILPKGKGYGQPPDAIIALPGWLSDEDVNTTRPIGTNYCDLTSV----CGVKEYIH--- 201 (271)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P----~G~~D~~~--- 201 (271)
..... . .....+++| .|+.|.++
T Consensus 151 -------~~~~~---~----------------------------------------~~~~~i~~PSLHi~G~~D~iv~~~ 180 (230)
T KOG2551|consen 151 -------KKLDE---S----------------------------------------AYKRPLSTPSLHIFGETDTIVPSE 180 (230)
T ss_pred -------chhhh---h----------------------------------------hhccCCCCCeeEEecccceeecch
Confidence 00000 0 000346777 89999885
Q ss_pred -hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhhh
Q 045862 202 -KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEKK 245 (271)
Q Consensus 202 -~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 245 (271)
+..+.+.+++. .++.-+ +||+++-.. .+.+.|.+||+...
T Consensus 181 ~s~~L~~~~~~a-~vl~Hp-ggH~VP~~~--~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 181 RSEQLAESFKDA-TVLEHP-GGHIVPNKA--KYKEKIADFIQSFL 221 (230)
T ss_pred HHHHHHHhcCCC-eEEecC-CCccCCCch--HHHHHHHHHHHHHH
Confidence 57899999998 766665 599988765 55666666666653
No 137
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.58 E-value=1.9e-07 Score=74.68 Aligned_cols=93 Identities=22% Similarity=0.239 Sum_probs=65.7
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCC--CCCCCCccc----CcchHHhHHHHHHHHHHHh-------
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGF--GDTDELLEM----TSYTCFHVIGDLIGLIDLV------- 75 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~--G~S~~~~~~----~~~~~~~~~~~l~~~l~~l------- 75 (271)
-|.||+-||.+++...|..+.+.|++.||-|.++|.||- |........ ...-+-+...|+..+|+.|
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 378999999999999999999999999999999999993 333322210 1111122333333333322
Q ss_pred ------CCCCCceEEEEeChhhHHHHHHHHhhcc
Q 045862 76 ------APNDEKMFVVGHDSGTYMACFLCLFRAN 103 (271)
Q Consensus 76 ------~~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 103 (271)
.. .+|.++|||+||+.++.++....+
T Consensus 151 ~l~~~ld~--~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 151 ALAGRLDP--QRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccccccCc--cceEEEecccccHHHHHhcccccc
Confidence 33 689999999999999999876543
No 138
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=5.2e-07 Score=76.43 Aligned_cols=106 Identities=20% Similarity=0.170 Sum_probs=78.5
Q ss_pred CceEEEEeccCCCc-----cchHHH--HHHHhhCCCeEEeeCCCCCCCCCCCc------ccCcchHHhHHHHHHHHHHHh
Q 045862 9 GPEILFLYVFPELR-----YSWCHQ--TIALASLSYRAVAPDLSGFGDTDELL------EMTSYTCFHVIGDLIGLIDLV 75 (271)
Q Consensus 9 ~~~vlllHG~~~~~-----~~~~~~--~~~l~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~l~~~l~~l 75 (271)
-|+++++-|.++-. ..|... ...|+..||-|+.+|-||--...... ......++++++-+..+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 38999999998633 333322 35688889999999999865443221 123457899999999999887
Q ss_pred CC-CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 76 AP-NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 76 ~~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
|. +=++|.+-|||+||.+++....++|+.++..|.-+|.
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapV 761 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPV 761 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcc
Confidence 42 1168999999999999999999999987766654443
No 139
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.56 E-value=9.5e-08 Score=72.78 Aligned_cols=49 Identities=20% Similarity=0.208 Sum_probs=35.6
Q ss_pred HHHHHHHh-CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 68 LIGLIDLV-APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 68 l~~~l~~l-~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
...++... .++.+++.|+|.|.||-+|+.+|+.+| .|+++|.++++...
T Consensus 9 Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 9 AIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 33444333 332368999999999999999999999 79999999987644
No 140
>PRK04940 hypothetical protein; Provisional
Probab=98.50 E-value=1.2e-06 Score=63.62 Aligned_cols=88 Identities=18% Similarity=0.186 Sum_probs=54.0
Q ss_pred EEEEeccCCCccc--hHHHH-HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC-C-CCceEEEE
Q 045862 12 ILFLYVFPELRYS--WCHQT-IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP-N-DEKMFVVG 86 (271)
Q Consensus 12 vlllHG~~~~~~~--~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~-~-~~~~~lvG 86 (271)
||+||||.++... .+... ..+.. +.+++ +++ ..+..+.++.+.+++..+.. + .+++.|||
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p-~~~~~--~l~------------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liG 66 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDP-DVRLI--SYS------------TLHPKHDMQHLLKEVDKMLQLSDDERPLICG 66 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCC-CCeEE--ECC------------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEE
Confidence 7999999998887 54321 12211 24444 322 02222333344444442111 0 04789999
Q ss_pred eChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 87 HDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.|+||..|..+|.++. -..|+++|...+
T Consensus 67 SSLGGyyA~~La~~~g---~~aVLiNPAv~P 94 (180)
T PRK04940 67 VGLGGYWAERIGFLCG---IRQVIFNPNLFP 94 (180)
T ss_pred eChHHHHHHHHHHHHC---CCEEEECCCCCh
Confidence 9999999999999975 357889988754
No 141
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.48 E-value=7e-06 Score=60.45 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=73.6
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCC----------------cccCcchHHhHHHHHHHHHH
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDEL----------------LEMTSYTCFHVIGDLIGLID 73 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~----------------~~~~~~~~~~~~~~l~~~l~ 73 (271)
.+||++||++.+...|..++..|.-.+..-|++.-|-.--+... ...+.-++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999998888887655566777754422111100 00123356666777777776
Q ss_pred Hh---CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 74 LV---APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 74 ~l---~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
.. +++-.++.+-|.|+||.++++.+..+|..+.+.+-..+..
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~ 128 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFL 128 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccc
Confidence 53 4322568999999999999999999988787777666544
No 142
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.48 E-value=2e-06 Score=68.01 Aligned_cols=102 Identities=12% Similarity=0.046 Sum_probs=68.4
Q ss_pred CCceEEEEeccCCCccch-------HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-----
Q 045862 8 QGPEILFLYVFPELRYSW-------CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----- 75 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~-------~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----- 75 (271)
++.+||+.-|.++.-+.. ..+.+.....|-+|+++++||.|.|.... +.++++.|-.+.++.|
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhccc
Confidence 456899998888766551 12223233347899999999999997665 3466666655555544
Q ss_pred CCCCCceEEEEeChhhHHHHHHHHhhc----cccceEEEeecC
Q 045862 76 APNDEKMFVVGHDSGTYMACFLCLFRA----NRIKALVNLSVV 114 (271)
Q Consensus 76 ~~~~~~~~lvGhS~Gg~ia~~~a~~~p----~~v~~lvl~~~~ 114 (271)
|+..+.+++.|||+||.|+..++..+. +.|+-+++-+-.
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRs 253 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRS 253 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCC
Confidence 332257999999999999988766643 235545555533
No 143
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.47 E-value=2.5e-06 Score=66.03 Aligned_cols=107 Identities=18% Similarity=0.116 Sum_probs=77.2
Q ss_pred CceEEEEeccCCCccchHHHH--HHHhhC-CCeEEeeCCC-------CCCCCCCCcc--cCcchHHhHHHHHHHHHHHhC
Q 045862 9 GPEILFLYVFPELRYSWCHQT--IALASL-SYRAVAPDLS-------GFGDTDELLE--MTSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~--~~l~~~-g~~vi~~D~~-------G~G~S~~~~~--~~~~~~~~~~~~l~~~l~~l~ 76 (271)
.|.||.+||-.++...+.... +.|+++ ||-|..+|-- +.+.+..+.+ ...-....+++.+..++.+.+
T Consensus 61 apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~g 140 (312)
T COG3509 61 APLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYG 140 (312)
T ss_pred CCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcC
Confidence 368999999999988877765 667665 8999999621 2222222221 012234445566666666777
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
++-++|.+.|.|-||.++..+++.+|+.+.++.++++..
T Consensus 141 idp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 141 IDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 733589999999999999999999999999999888766
No 144
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.42 E-value=3.2e-06 Score=63.88 Aligned_cols=103 Identities=18% Similarity=0.143 Sum_probs=73.8
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCC------eEEeeCCCCC----CCCCCCc---------ccCcchHHhHHHHHHHH
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSY------RAVAPDLSGF----GDTDELL---------EMTSYTCFHVIGDLIGL 71 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~------~vi~~D~~G~----G~S~~~~---------~~~~~~~~~~~~~l~~~ 71 (271)
|.|||||.+++.......+..|.+. + =++.+|--|- |.=++.. .....+..++...+..+
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~-~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPD-YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhc-ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 7899999999999999999999876 4 2566666552 1111111 00123455566666666
Q ss_pred HHH----hCCCCCceEEEEeChhhHHHHHHHHhhcc-----ccceEEEeecCCC
Q 045862 72 IDL----VAPNDEKMFVVGHDSGTYMACFLCLFRAN-----RIKALVNLSVVFN 116 (271)
Q Consensus 72 l~~----l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 116 (271)
+.. .++ +++.+|||||||.-...++..+.. .++++|.+++++.
T Consensus 126 msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 554 478 899999999999988888887642 4899999998775
No 145
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=8.4e-06 Score=73.27 Aligned_cols=106 Identities=16% Similarity=0.191 Sum_probs=77.3
Q ss_pred CceEEEEeccCCCcc-------chHHHHHHHhhCCCeEEeeCCCCCCCCCCCc------ccCcchHHhHHHHHHHHHHHh
Q 045862 9 GPEILFLYVFPELRY-------SWCHQTIALASLSYRAVAPDLSGFGDTDELL------EMTSYTCFHVIGDLIGLIDLV 75 (271)
Q Consensus 9 ~~~vlllHG~~~~~~-------~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~l~~~l~~l 75 (271)
-|.||.+||.+++.. .|..+ .....|+-|+.+|.||-|...... ..+...++++...+..+++..
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~ 603 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP 603 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc
Confidence 377889999986322 24333 345568999999999987664331 224457778888888888776
Q ss_pred CCCCCceEEEEeChhhHHHHHHHHhhccc-cceEEEeecCCC
Q 045862 76 APNDEKMFVVGHDSGTYMACFLCLFRANR-IKALVNLSVVFN 116 (271)
Q Consensus 76 ~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 116 (271)
-++..++.+.|+|.||.+++.++...|+. ++..+.++|...
T Consensus 604 ~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 604 FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 55436899999999999999999999855 455588888763
No 146
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.37 E-value=2.4e-06 Score=68.04 Aligned_cols=104 Identities=13% Similarity=0.025 Sum_probs=65.4
Q ss_pred CceEEEEeccCCCccc-hHHHHHHHhhCC--CeEEeeCCCCCCCCCCCcc---cCcchHHhHHHHHHHHHHHhCCCCCce
Q 045862 9 GPEILFLYVFPELRYS-WCHQTIALASLS--YRAVAPDLSGFGDTDELLE---MTSYTCFHVIGDLIGLIDLVAPNDEKM 82 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~-~~~~~~~l~~~g--~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~ 82 (271)
+..+||+||+..+-.. -...++-..+.| ...+.+.||-.|.--...- ...++-..+..-|..+.+.... +++
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~--~~I 193 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV--KRI 193 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC--ceE
Confidence 5689999999865433 223333333322 5788999998775422210 1234445555555555555556 789
Q ss_pred EEEEeChhhHHHHHHHHhh--------ccccceEEEeecC
Q 045862 83 FVVGHDSGTYMACFLCLFR--------ANRIKALVNLSVV 114 (271)
Q Consensus 83 ~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~ 114 (271)
+|++||||.+++++...+. +.+++-+|+-+|-
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 9999999999999887753 2346666666553
No 147
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.37 E-value=6.1e-06 Score=71.72 Aligned_cols=105 Identities=16% Similarity=0.167 Sum_probs=64.1
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhh----------------CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHH
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALAS----------------LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGL 71 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~----------------~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~ 71 (271)
+|-||+||+|..|+...-+.++..-.. ..|+..++|+-+ ........++.++++-+.+.
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHH
Confidence 467999999999998888777654431 125677777643 11112234555555444433
Q ss_pred HH----HhCC-CC------CceEEEEeChhhHHHHHHHHh---hccccceEEEeecCCCC
Q 045862 72 ID----LVAP-ND------EKMFVVGHDSGTYMACFLCLF---RANRIKALVNLSVVFNP 117 (271)
Q Consensus 72 l~----~l~~-~~------~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~ 117 (271)
|+ .... .+ ..++|+||||||.||..++.. .++.|.-++..+++...
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 33 2221 01 349999999999999877753 23456666666665433
No 148
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.37 E-value=8.6e-06 Score=61.44 Aligned_cols=108 Identities=16% Similarity=0.157 Sum_probs=82.6
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhC-C--CeEEeeCCCCCCCCCC---Cc----ccCcchHHhHHHHHHHHHHHhCC
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASL-S--YRAVAPDLSGFGDTDE---LL----EMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~-g--~~vi~~D~~G~G~S~~---~~----~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
+.+.+++|+|.++....|..+...|... + +.++++...||-.-+. .. ...-++++++++-=.++++..-.
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 3578999999999999999998887653 1 5699999988865441 11 12457899999888888887755
Q ss_pred CCCceEEEEeChhhHHHHHHHHhhc--cccceEEEeecCC
Q 045862 78 NDEKMFVVGHDSGTYMACFLCLFRA--NRIKALVNLSVVF 115 (271)
Q Consensus 78 ~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 115 (271)
.+.+++++|||.|+++.+.+.-... -.|.+.+++-|..
T Consensus 108 k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 108 KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 4579999999999999999887432 2577888777654
No 149
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.36 E-value=1.6e-06 Score=67.39 Aligned_cols=107 Identities=12% Similarity=0.113 Sum_probs=71.6
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCC------CCcc------c---------C------cchHH
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTD------ELLE------M---------T------SYTCF 62 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~------~~~~------~---------~------~~~~~ 62 (271)
|.+||-||++++...|..++-.|+.+||-|.+++.|-+-.+- .+.. + . +.-+.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv~ 198 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQVG 198 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHHH
Confidence 899999999999999999999999999999999998654331 0000 0 0 00111
Q ss_pred hHHHHH---HHHHHHhC----------------------CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 63 HVIGDL---IGLIDLVA----------------------PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 63 ~~~~~l---~~~l~~l~----------------------~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.-+..+ ..+++.++ ++..++.++|||+||..++...+.+ ..+++.|++++-..+
T Consensus 199 ~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM~P 277 (399)
T KOG3847|consen 199 QRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWMFP 277 (399)
T ss_pred HHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeeeecc
Confidence 122222 23333321 1113588999999999888766654 468888988875544
No 150
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.35 E-value=4.4e-06 Score=70.97 Aligned_cols=109 Identities=18% Similarity=0.191 Sum_probs=71.0
Q ss_pred CceEEEEeccCCCccch--HHHHHHHhhC-CCeEEeeCCCCCCCCCCCcc-----cCcchHHhHHHHHHHHHHHhC----
Q 045862 9 GPEILFLYVFPELRYSW--CHQTIALASL-SYRAVAPDLSGFGDTDELLE-----MTSYTCFHVIGDLIGLIDLVA---- 76 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~--~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~~l~~~l~~l~---- 76 (271)
||.+|++-|=+.-...| ..++..|+++ |--|++++.|-+|+|.+..+ ..-.|.++...|+..+++++.
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 66666664443322212 3355566665 67899999999999976542 234578888888888887753
Q ss_pred -CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 77 -PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 77 -~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.++.|++++|-|+||++|..+-.+||+.|.+.+..+++...
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 12248999999999999999999999999999998887765
No 151
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.32 E-value=4e-06 Score=69.87 Aligned_cols=85 Identities=19% Similarity=0.239 Sum_probs=60.7
Q ss_pred chHHHHHHHhhCCCe------EEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-CCCCCceEEEEeChhhHHHHH
Q 045862 24 SWCHQTIALASLSYR------AVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV-APNDEKMFVVGHDSGTYMACF 96 (271)
Q Consensus 24 ~~~~~~~~l~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~lvGhS~Gg~ia~~ 96 (271)
.|..+++.|.+.||. ..-+|+|- .. ...+++...+..+++.. ...+++++||||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~------~~----~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL------SP----AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh------ch----hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHH
Confidence 699999999987774 23378882 11 12345555555555443 111279999999999999999
Q ss_pred HHHhhcc------ccceEEEeecCCCCC
Q 045862 97 LCLFRAN------RIKALVNLSVVFNPN 118 (271)
Q Consensus 97 ~a~~~p~------~v~~lvl~~~~~~~~ 118 (271)
+....+. .|+++|.++++....
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9988753 599999999988764
No 152
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.30 E-value=1.8e-06 Score=67.70 Aligned_cols=56 Identities=23% Similarity=0.421 Sum_probs=43.8
Q ss_pred HhHHHHHHHHHHH-hCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 62 FHVIGDLIGLIDL-VAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 62 ~~~~~~l~~~l~~-l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
..+.++|...|+. +.....+..|+|+||||..|+.++.++|+.+.+++.+++...+
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 4455777777765 3432123799999999999999999999999999999987543
No 153
>PLN02606 palmitoyl-protein thioesterase
Probab=98.30 E-value=5.2e-06 Score=65.19 Aligned_cols=104 Identities=16% Similarity=0.048 Sum_probs=69.4
Q ss_pred CceEEEEeccC--CCccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 9 GPEILFLYVFP--ELRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 9 ~~~vlllHG~~--~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
..|||++||++ ++...+..+.+.+.+. |+.+..+. .|-+..+ . -...+.++++.+.+-+.....-.+-+++|
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~--s--~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD--S--LFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc--c--cccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 45999999999 6666788888888633 56555555 2322211 1 11234455555444443311101359999
Q ss_pred EeChhhHHHHHHHHhhcc--ccceEEEeecCCCC
Q 045862 86 GHDSGTYMACFLCLFRAN--RIKALVNLSVVFNP 117 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 117 (271)
|+|-||.++-.++.+.|+ .|..+|-++++-..
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 999999999999999987 49999999987665
No 154
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.28 E-value=1e-05 Score=67.72 Aligned_cols=106 Identities=15% Similarity=0.083 Sum_probs=65.9
Q ss_pred CceEEEEeccCCCcc-chHHHHHHHhhCCC----eEEeeCCCCC-CCCCCCcccCcchHHhHHHHHHHHHHHh-CC--CC
Q 045862 9 GPEILFLYVFPELRY-SWCHQTIALASLSY----RAVAPDLSGF-GDTDELLEMTSYTCFHVIGDLIGLIDLV-AP--ND 79 (271)
Q Consensus 9 ~~~vlllHG~~~~~~-~~~~~~~~l~~~g~----~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~l~~~l~~l-~~--~~ 79 (271)
-|.|+|+||-..... ....++..|.++|. -++.+|-.+. ..+..... .......++++|.-.+++. .. +.
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 478999999643211 12344555655542 3567775321 11111110 1122344557777777653 22 11
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
++..|+|+||||..|+.++.++|+++.+++.+++.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 568899999999999999999999999999999865
No 155
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.25 E-value=5.5e-06 Score=64.12 Aligned_cols=99 Identities=18% Similarity=0.077 Sum_probs=65.7
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCC-------------CCCCCcccCcchHHhHHHHHH-HHHHHh
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFG-------------DTDELLEMTSYTCFHVIGDLI-GLIDLV 75 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G-------------~S~~~~~~~~~~~~~~~~~l~-~~l~~l 75 (271)
|-+||+||.+..+.+-... +.. |...|+.+.|-++ .++..+ ..-.....+.+. .+.++.
T Consensus 192 PLvlfLHgagq~g~dn~~~---l~s-g~gaiawa~pedqcfVlAPQy~~if~d~e~~t---~~~l~~~idli~~vlas~y 264 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKV---LSS-GIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT---LLYLIEKIDLILEVLASTY 264 (387)
T ss_pred cEEEEEecCCCCCchhhhh---hhc-CccceeeecccCceEEEccccccccccccccc---chhHHHHHHHHHHHHhhcc
Confidence 8899999999876653322 222 2333444443333 122111 223334445555 444667
Q ss_pred CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 76 APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 76 ~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
+++..++.++|.|+||.-++.++.++|+.+++.+++++..
T Consensus 265 nID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 265 NIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred CcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 7765789999999999999999999999999999999765
No 156
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.17 E-value=4.2e-06 Score=61.22 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=68.0
Q ss_pred CceEEEEeccC---CCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 9 GPEILFLYVFP---ELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 9 ~~~vlllHG~~---~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
.+..|||||.- ++...-..++..+.++||+|..++ ++.+..... ...++.++..-+.-+++...-. +.+.+-
T Consensus 67 ~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q~ht-L~qt~~~~~~gv~filk~~~n~-k~l~~g 141 (270)
T KOG4627|consen 67 AKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQVHT-LEQTMTQFTHGVNFILKYTENT-KVLTFG 141 (270)
T ss_pred ccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCccccc-HHHHHHHHHHHHHHHHHhcccc-eeEEEc
Confidence 57899999974 344444445555666699999886 444432211 2345556666666666665431 557778
Q ss_pred EeChhhHHHHHHHHh-hccccceEEEeecCC
Q 045862 86 GHDSGTYMACFLCLF-RANRIKALVNLSVVF 115 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~ 115 (271)
|||.|+.+|+.+..+ +..+|.++++.++.+
T Consensus 142 GHSaGAHLa~qav~R~r~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 142 GHSAGAHLAAQAVMRQRSPRIWGLILLCGVY 172 (270)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHhhHh
Confidence 899999999988776 345799999888766
No 157
>COG3150 Predicted esterase [General function prediction only]
Probab=98.09 E-value=3.3e-05 Score=54.70 Aligned_cols=90 Identities=19% Similarity=0.200 Sum_probs=65.2
Q ss_pred EEEEeccCCCccchHHHH--HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 12 ILFLYVFPELRYSWCHQT--IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~--~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
||+||||.++....+... .++... .+.+.+--| . -.......++.++.++..++- +...|||-|+
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y~~p-------~---l~h~p~~a~~ele~~i~~~~~--~~p~ivGssL 68 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEYSTP-------H---LPHDPQQALKELEKAVQELGD--ESPLIVGSSL 68 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceeeecC-------C---CCCCHHHHHHHHHHHHHHcCC--CCceEEeecc
Confidence 899999999988887654 444443 343333322 1 135678889999999999987 6789999999
Q ss_pred hhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 90 GTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 90 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
||+.|..++.++. ++ -|+++|...+
T Consensus 69 GGY~At~l~~~~G--ir-av~~NPav~P 93 (191)
T COG3150 69 GGYYATWLGFLCG--IR-AVVFNPAVRP 93 (191)
T ss_pred hHHHHHHHHHHhC--Ch-hhhcCCCcCc
Confidence 9999999998864 33 3556666544
No 158
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.09 E-value=4.3e-05 Score=60.19 Aligned_cols=104 Identities=12% Similarity=0.014 Sum_probs=68.5
Q ss_pred CCceEEEEeccCCCcc--chHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC-CCCCceE
Q 045862 8 QGPEILFLYVFPELRY--SWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA-PNDEKMF 83 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~--~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~~~ 83 (271)
...|+|+.||+|.+.. ....+.+.+.+. |..+.++.. |.+.... -...+.++++.+.+-+.... +. +-++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s--~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDS--WLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCcccc--ceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 3468999999997654 455555555442 566676654 3322111 12344555555554444321 11 3599
Q ss_pred EEEeChhhHHHHHHHHhhcc--ccceEEEeecCCCC
Q 045862 84 VVGHDSGTYMACFLCLFRAN--RIKALVNLSVVFNP 117 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 117 (271)
+||+|-||.++-.++.+.|+ .|..+|-++++-..
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 99999999999999999987 59999999987655
No 159
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.06 E-value=9.9e-06 Score=63.12 Aligned_cols=106 Identities=6% Similarity=-0.031 Sum_probs=58.2
Q ss_pred ceEEEEeccCCCc---cchHHHHHHHhhC--CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC-CCCCceE
Q 045862 10 PEILFLYVFPELR---YSWCHQTIALASL--SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA-PNDEKMF 83 (271)
Q Consensus 10 ~~vlllHG~~~~~---~~~~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~~~~ 83 (271)
.|||+.||++.+. ..+..+...+.+. |--|..+++ |-+.++...+.-..++.+.++.+.+.+.... +. +-++
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~G~~ 83 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELA-NGFN 83 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT-T-EE
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhh-ccee
Confidence 5899999999754 3566655554443 667777776 2222111110011345666666666665421 11 4599
Q ss_pred EEEeChhhHHHHHHHHhhcc-ccceEEEeecCCCC
Q 045862 84 VVGHDSGTYMACFLCLFRAN-RIKALVNLSVVFNP 117 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~ 117 (271)
+||+|-||.++-.++.+.|+ .|..+|-++++-..
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~G 118 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMG 118 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCcccc
Confidence 99999999999999999875 69999999987655
No 160
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.06 E-value=7.8e-05 Score=62.43 Aligned_cols=82 Identities=18% Similarity=0.180 Sum_probs=61.0
Q ss_pred HHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh---CCCCCceEEEEeChhhHHHHHHHHhhccc
Q 045862 28 QTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV---APNDEKMFVVGHDSGTYMACFLCLFRANR 104 (271)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 104 (271)
+...|.. |+.|+.+.+.- .+. ...++++.+.....+++.. ..+.++.+|+|.|-||+.++.+|+.+|+.
T Consensus 93 vG~AL~~-GHPvYFV~F~p-----~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFFP-----EPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHHc-CCCeEEEEecC-----CCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 4455666 89988887641 122 2457777777666666554 21115899999999999999999999999
Q ss_pred cceEEEeecCCCC
Q 045862 105 IKALVNLSVVFNP 117 (271)
Q Consensus 105 v~~lvl~~~~~~~ 117 (271)
+..+|+-+++...
T Consensus 165 ~gplvlaGaPlsy 177 (581)
T PF11339_consen 165 VGPLVLAGAPLSY 177 (581)
T ss_pred cCceeecCCCccc
Confidence 9999999887766
No 161
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.04 E-value=0.0001 Score=59.50 Aligned_cols=105 Identities=11% Similarity=0.086 Sum_probs=68.1
Q ss_pred eEEEEeccCCCcc---chHHHHHHHhhCCCeEEeeCCCC--CCCCCC--------------C-cccC-c---------ch
Q 045862 11 EILFLYVFPELRY---SWCHQTIALASLSYRAVAPDLSG--FGDTDE--------------L-LEMT-S---------YT 60 (271)
Q Consensus 11 ~vlllHG~~~~~~---~~~~~~~~l~~~g~~vi~~D~~G--~G~S~~--------------~-~~~~-~---------~~ 60 (271)
.||+|||.+.+.. ....+-..|.+.||..+++.+|. -..+.. . .... . ..
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 7999999998764 34555567778899999999987 110000 0 0000 0 01
Q ss_pred H----HhHHHHHHHHH---HHhCCCCCceEEEEeChhhHHHHHHHHhhcc-ccceEEEeecCCCC
Q 045862 61 C----FHVIGDLIGLI---DLVAPNDEKMFVVGHDSGTYMACFLCLFRAN-RIKALVNLSVVFNP 117 (271)
Q Consensus 61 ~----~~~~~~l~~~l---~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~ 117 (271)
. +.+..-|.+++ ...+. .+++||||+.|+..++.+....+. .+.++|++++....
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~--~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGG--KNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQ 231 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCc
Confidence 1 22222333333 33344 559999999999999999988764 58999999987643
No 162
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.02 E-value=0.00012 Score=56.11 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=70.6
Q ss_pred ceEEEEeccCCCccc--hHHHHHHHhhC-CCeEEeeCCCCCC--CCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEE
Q 045862 10 PEILFLYVFPELRYS--WCHQTIALASL-SYRAVAPDLSGFG--DTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFV 84 (271)
Q Consensus 10 ~~vlllHG~~~~~~~--~~~~~~~l~~~-g~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~l 84 (271)
.|+|++||++.++.. ...+.+.+.+. |..|+++|. |-| .|. -..+.++++-+.+.+.....-.+-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~------l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS------LMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh------hccHHHHHHHHHHHHhcchhccCceEE
Confidence 589999999987776 77777777765 788999986 444 221 123445555544444322110146999
Q ss_pred EEeChhhHHHHHHHHhhcc-ccceEEEeecCCCC
Q 045862 85 VGHDSGTYMACFLCLFRAN-RIKALVNLSVVFNP 117 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~ 117 (271)
+|.|-||.++-.++...++ .|..+|-++++-..
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGPHAG 130 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCCcCC
Confidence 9999999999999988765 58888888876554
No 163
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.02 E-value=2.1e-05 Score=68.07 Aligned_cols=106 Identities=13% Similarity=0.029 Sum_probs=66.0
Q ss_pred CceEEEEeccCC---CccchHHHHHHHhhC-C-CeEEeeCCC----CCCCCCCCcccCcchHHhHH---HHHHHHHHHhC
Q 045862 9 GPEILFLYVFPE---LRYSWCHQTIALASL-S-YRAVAPDLS----GFGDTDELLEMTSYTCFHVI---GDLIGLIDLVA 76 (271)
Q Consensus 9 ~~~vlllHG~~~---~~~~~~~~~~~l~~~-g-~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~~l~~~l~~l~ 76 (271)
.|.||+|||.+. +...+ ....|... + +-|+++++| |+..+........+.+.++. +.+.+-++..+
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 489999999652 22222 22344433 3 899999998 34333222111233344444 44445555566
Q ss_pred CCCCceEEEEeChhhHHHHHHHHh--hccccceEEEeecCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLF--RANRIKALVNLSVVFN 116 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 116 (271)
.+.++++|+|+|.||..+..++.. .+..+.++|+.++...
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 543689999999999998888775 2346888888886554
No 164
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.01 E-value=9.4e-05 Score=55.14 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=63.6
Q ss_pred eEEEEeccCCCc-cchHHHHHHHhhCCCeEEeeCC-CCCCCCCCCcc------cCcchHHhHHHHHHHHHHHh---CCCC
Q 045862 11 EILFLYVFPELR-YSWCHQTIALASLSYRAVAPDL-SGFGDTDELLE------MTSYTCFHVIGDLIGLIDLV---APND 79 (271)
Q Consensus 11 ~vlllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~-~G~G~S~~~~~------~~~~~~~~~~~~l~~~l~~l---~~~~ 79 (271)
.||++--+.+.. ..-+..+..++..||.|++||+ +|--.|..... ....+....-.++..+++.+ +.+
T Consensus 41 ~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~- 119 (242)
T KOG3043|consen 41 VLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS- 119 (242)
T ss_pred EEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc-
Confidence 455555544433 3477888889989999999995 55333332110 01234444455555555444 421
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
.++-++|+||||.++..+....| .+.+.+..=|.
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps 153 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPS 153 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCC
Confidence 68999999999998888777776 45555544443
No 165
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.90 E-value=3.8e-05 Score=58.52 Aligned_cols=221 Identities=10% Similarity=-0.013 Sum_probs=111.6
Q ss_pred ceEEEEeccCCCccchH-HHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHH--------HHHHH------H
Q 045862 10 PEILFLYVFPELRYSWC-HQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDL--------IGLID------L 74 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~-~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l--------~~~l~------~ 74 (271)
+..|++-|-+.+...=+ .+...+.+++...++++-|-||+..++.. ....-+.+.|+ .+... .
T Consensus 114 ~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q--~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~ 191 (371)
T KOG1551|consen 114 DLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQ--IIHMLEYVTDLFKMGRATIQEFVKLFTWSSA 191 (371)
T ss_pred CeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHH--HHHHHHHHHHHHHhhHHHHHHHHHhcccccc
Confidence 33444444444443322 23455666678899999999998876552 11111122222 11111 2
Q ss_pred hCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHHhhhCCCCCCCCC
Q 045862 75 VAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFLTLWTPDPIILPK 154 (271)
Q Consensus 75 l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
.|. +++.++|-||||.+|..+.+.++..|+-+-++++....... ....+.. . ...++++....... .....
T Consensus 192 ~g~--g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~----teg~l~~-~-~s~~~~~~~~t~~~-~~~~r 262 (371)
T KOG1551|consen 192 DGL--GNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSA----TEGLLLQ-D-TSKMKRFNQTTNKS-GYTSR 262 (371)
T ss_pred cCc--ccceeeeeecccHHHHhhcccCCCCccccccccccccchhh----hhhhhhh-h-hHHHHhhccCcchh-hhhhh
Confidence 366 79999999999999999999888777666555543211000 0001110 0 01111111100000 00000
Q ss_pred CCCCCCCCCccccCCCCCCccccccccccc----ccCCcccCC---------CCCcchhc----hhHHhhhcCCCceEEE
Q 045862 155 GKGYGQPPDAIIALPGWLSDEDVNTTRPIG----TNYCDLTSV---------CGVKEYIH----KGEFRRDVPLLEEITI 217 (271)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~P---------~G~~D~~~----~~~~~~~~~~~~~~~~ 217 (271)
.. ........ .....-+..+...+.+.. .......+| ..++|..+ ...+++..|++ ++..
T Consensus 263 ~p-~Q~~~~~~-~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg~-eVr~ 339 (371)
T KOG1551|consen 263 NP-AQSYHLLS-KEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGC-EVRY 339 (371)
T ss_pred Cc-hhhHHHHH-HHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCCC-EEEE
Confidence 00 00000000 000000011111111111 111334444 56777553 56899999999 9999
Q ss_pred eCCCCccc-cccChHHHHHHHHHHHhhhh
Q 045862 218 MEGVGHFI-NQEKGHQLETEIGTSRGEKK 245 (271)
Q Consensus 218 ~~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 245 (271)
++ .||.- .+-+.+.|.+.|.+-|++..
T Consensus 340 ~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 340 LE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred ee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 99 69964 56788999999999888764
No 166
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.85 E-value=4.7e-05 Score=65.03 Aligned_cols=86 Identities=23% Similarity=0.267 Sum_probs=56.9
Q ss_pred cchHHHHHHHhhCCCe-----EEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH----hCCCCCceEEEEeChhhHH
Q 045862 23 YSWCHQTIALASLSYR-----AVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL----VAPNDEKMFVVGHDSGTYM 93 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~-----vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~~~lvGhS~Gg~i 93 (271)
..|..+++.|.+.||. ...+|+|= |. . .....+++-..+..+++. -+- ++++|+||||||.+
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWRl---s~--~--~le~rd~YF~rLK~lIE~ay~~ngg--kKVVLV~HSMGglv 226 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWRL---SF--Q--NTEVRDQTLSRLKSNIELMVATNGG--KKVVVVPHSMGVLY 226 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeeccccccc---Cc--c--chhhhhHHHHHHHHHHHHHHHHcCC--CeEEEEEeCCchHH
Confidence 3679999999998885 44555551 11 0 011223444445555543 233 79999999999999
Q ss_pred HHHHHHhh---------------ccccceEEEeecCCCC
Q 045862 94 ACFLCLFR---------------ANRIKALVNLSVVFNP 117 (271)
Q Consensus 94 a~~~a~~~---------------p~~v~~lvl~~~~~~~ 117 (271)
++.+.... ...|+++|.++++...
T Consensus 227 ~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 227 FLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 99987632 1258999999987765
No 167
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.85 E-value=8.8e-06 Score=59.83 Aligned_cols=108 Identities=19% Similarity=0.266 Sum_probs=68.5
Q ss_pred ceEEEEeccCCCccchHH--HH-HHHhhCCCeEEeeCC--CCCCCCCCCccc------------------CcchHHh-HH
Q 045862 10 PEILFLYVFPELRYSWCH--QT-IALASLSYRAVAPDL--SGFGDTDELLEM------------------TSYTCFH-VI 65 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~--~~-~~l~~~g~~vi~~D~--~G~G~S~~~~~~------------------~~~~~~~-~~ 65 (271)
|+|.++.|+.++.+.+-. -. ..-.+.|+-|+.+|- ||..-...+..+ ..|.+-+ ..
T Consensus 45 P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~ 124 (283)
T KOG3101|consen 45 PVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVV 124 (283)
T ss_pred ceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHH
Confidence 789999999998877632 22 233445889999994 554211111100 0122222 23
Q ss_pred HHHHHHHHHh--CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 66 GDLIGLIDLV--APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 66 ~~l~~~l~~l--~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+.+-+++..- .++-.++.+.||||||.=|+..+.+.|.+.+++-...|...+
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 4444554421 121157899999999999999999999998888877776654
No 168
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.83 E-value=5.3e-05 Score=64.68 Aligned_cols=109 Identities=14% Similarity=0.090 Sum_probs=75.9
Q ss_pred CCCceEEEEeccCCCcc---ch--HHHHH---HHhhCCCeEEeeCCCCCCCCCCCcccCcch-HHhHHHHHHHHHHHhCC
Q 045862 7 GQGPEILFLYVFPELRY---SW--CHQTI---ALASLSYRAVAPDLSGFGDTDELLEMTSYT-CFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~---~~--~~~~~---~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~~l~~~l~~l~~ 77 (271)
|..|+++..+-++-... .+ ....+ .++.+||-|+..|.||.|.|+..... ..+ -.+-..|+++++.....
T Consensus 43 g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~~~~E~~Dg~D~I~Wia~QpW 121 (563)
T COG2936 43 GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-ESSREAEDGYDTIEWLAKQPW 121 (563)
T ss_pred CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-eccccccchhHHHHHHHhCCc
Confidence 34577777773333222 11 12223 57788999999999999999877631 122 12223455666666555
Q ss_pred CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 78 NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 78 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
.+++|..+|.|++|...+.+|+..|..+++++-+.+...
T Consensus 122 sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 122 SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 458999999999999999999999988998887776654
No 169
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.77 E-value=3e-05 Score=64.00 Aligned_cols=90 Identities=14% Similarity=0.205 Sum_probs=65.8
Q ss_pred cchHHHHHHHhhCCCe------EEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHH
Q 045862 23 YSWCHQTIALASLSYR------AVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACF 96 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~ 96 (271)
..|..+++.|..-||. -..+|+|= |-......+..+..+..-|+...+.-|- +|++||+||||+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~~G~--kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKLNGG--KKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHHcCC--CceEEEecCCccHHHHH
Confidence 4788999999887776 56788873 1111211345666666666666666676 89999999999999999
Q ss_pred HHHhhcc--------ccceEEEeecCCCC
Q 045862 97 LCLFRAN--------RIKALVNLSVVFNP 117 (271)
Q Consensus 97 ~a~~~p~--------~v~~lvl~~~~~~~ 117 (271)
+...+++ .+++++-++++...
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCchhcC
Confidence 9988776 47788888876655
No 170
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.71 E-value=0.00011 Score=54.71 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=74.0
Q ss_pred ceEEEEeccCCCcc---chHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC--CCceEE
Q 045862 10 PEILFLYVFPELRY---SWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN--DEKMFV 84 (271)
Q Consensus 10 ~~vlllHG~~~~~~---~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~~~~l 84 (271)
..||||-|++..-. .-..+...|-+.+|.++-+-++.+ ...+...++.+-++|+..+++|++.. ...++|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss-----y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS-----YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc-----ccccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 46899988876433 345777888888899999887632 11124567888899999999988642 137999
Q ss_pred EEeChhhHHHHHHHHh--hccccceEEEeecCC
Q 045862 85 VGHDSGTYMACFLCLF--RANRIKALVNLSVVF 115 (271)
Q Consensus 85 vGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~ 115 (271)
+|||.|..=.+++..+ .+..+.+.|+.+|..
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 9999999888877733 456677777777665
No 171
>COG0627 Predicted esterase [General function prediction only]
Probab=97.69 E-value=0.00022 Score=57.31 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=68.0
Q ss_pred ceEEEEeccCCCccch---HHHHHHHhhCCCeEEeeCC--C------------CCCCCCCCc------ccCcchHHhHH-
Q 045862 10 PEILFLYVFPELRYSW---CHQTIALASLSYRAVAPDL--S------------GFGDTDELL------EMTSYTCFHVI- 65 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~---~~~~~~l~~~g~~vi~~D~--~------------G~G~S~~~~------~~~~~~~~~~~- 65 (271)
|+++++||..++...| ..+-......|+.++++|- + |-+.|--.. ....+.++++.
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl~ 134 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFLT 134 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHHH
Confidence 6889999998885443 2333334445777887642 2 222221110 00114444443
Q ss_pred HHHHHHHH-HhCCCC--CceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 66 GDLIGLID-LVAPND--EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 66 ~~l~~~l~-~l~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+.+-..++ +...++ +...++||||||.=|+.+|.++|+++..+.-.++...+
T Consensus 135 ~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 135 QELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred hhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 45553443 444321 16789999999999999999999999999998887766
No 172
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.68 E-value=0.00024 Score=60.06 Aligned_cols=109 Identities=15% Similarity=0.133 Sum_probs=71.6
Q ss_pred CCceEEEEeccCCCccchHHHHH-------------------HHhhCCCeEEeeCCC-CCCCCCCCccc-CcchHHhHHH
Q 045862 8 QGPEILFLYVFPELRYSWCHQTI-------------------ALASLSYRAVAPDLS-GFGDTDELLEM-TSYTCFHVIG 66 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~-------------------~l~~~g~~vi~~D~~-G~G~S~~~~~~-~~~~~~~~~~ 66 (271)
+.|.||++.|.++++..|..+.+ .+.+. .+|+.+|.| |.|.|...... ...+.++.++
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~ 117 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAE 117 (415)
T ss_dssp SS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-EESSGGGGS-SHHHHHH
T ss_pred CccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEeeccccccccchhhHHHH
Confidence 36899999999999998865532 12333 689999965 99999766532 2347788888
Q ss_pred HHHHHHHHh-----CCCCCceEEEEeChhhHHHHHHHHh----h------ccccceEEEeecCCCC
Q 045862 67 DLIGLIDLV-----APNDEKMFVVGHDSGTYMACFLCLF----R------ANRIKALVNLSVVFNP 117 (271)
Q Consensus 67 ~l~~~l~~l-----~~~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~~~~~~ 117 (271)
++..+|..+ .....+++|.|.|+||..+-.+|.. . +-.++++++.++...+
T Consensus 118 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 118 DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 888877664 1111589999999999877666654 2 1237899988887655
No 173
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.68 E-value=0.00017 Score=51.94 Aligned_cols=51 Identities=18% Similarity=0.177 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHh----CCCCCceEEEEeChhhHHHHHHHHhhcc----ccceEEEeecCC
Q 045862 63 HVIGDLIGLIDLV----APNDEKMFVVGHDSGTYMACFLCLFRAN----RIKALVNLSVVF 115 (271)
Q Consensus 63 ~~~~~l~~~l~~l----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 115 (271)
.+...+...++.. .. .+++++|||+||.+|..++..... .+..++..+++.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~--~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQYPD--YKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHCCC--CeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 3444555555443 44 789999999999999999988765 566777777655
No 174
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.66 E-value=0.00021 Score=53.76 Aligned_cols=81 Identities=15% Similarity=0.171 Sum_probs=54.9
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCe-EEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEe
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYR-AVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGh 87 (271)
...|||..||+.+...+.++.. .+ ++. ++++|+|- .+++. | + .+- +.++|||+
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~--~~-~~D~l~~yDYr~------------l~~d~---~----~--~~y--~~i~lvAW 64 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL--PE-NYDVLICYDYRD------------LDFDF---D----L--SGY--REIYLVAW 64 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC--CC-CccEEEEecCcc------------ccccc---c----c--ccC--ceEEEEEE
Confidence 4689999999999988877641 22 354 45677762 11110 1 1 133 68999999
Q ss_pred ChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 88 DSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
|||-++|..+.... .+..-|.+++...+
T Consensus 65 SmGVw~A~~~l~~~--~~~~aiAINGT~~P 92 (213)
T PF04301_consen 65 SMGVWAANRVLQGI--PFKRAIAINGTPYP 92 (213)
T ss_pred eHHHHHHHHHhccC--CcceeEEEECCCCC
Confidence 99999998876654 36677777776655
No 175
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.64 E-value=0.00059 Score=50.52 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=63.5
Q ss_pred ceEEEEeccCC-CccchH---------------HHHHHHhhCCCeEEeeCCC---CCCCCCCCcccCcchHHhHHHH-HH
Q 045862 10 PEILFLYVFPE-LRYSWC---------------HQTIALASLSYRAVAPDLS---GFGDTDELLEMTSYTCFHVIGD-LI 69 (271)
Q Consensus 10 ~~vlllHG~~~-~~~~~~---------------~~~~~l~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~~-l~ 69 (271)
..+|||||-|. ....|. ++++.-.+.||.|++.+.- -+-.+...+.....+..+.+.- ..
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~ 181 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWK 181 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHH
Confidence 47999999885 334453 2344445569999998753 1222222111011122222222 22
Q ss_pred HHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc--ccceEEEeecCC
Q 045862 70 GLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN--RIKALVNLSVVF 115 (271)
Q Consensus 70 ~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 115 (271)
.++.-... +.+.++.||.||...+.+..++|+ +|-++.+.+++.
T Consensus 182 ~~v~pa~~--~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 182 NIVLPAKA--ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHhcccCc--ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 33333344 789999999999999999999984 677788877664
No 176
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.53 E-value=0.00094 Score=52.05 Aligned_cols=102 Identities=11% Similarity=-0.014 Sum_probs=62.3
Q ss_pred eEEEEeccCCCc-cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCC-ceEEEEeC
Q 045862 11 EILFLYVFPELR-YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDE-KMFVVGHD 88 (271)
Q Consensus 11 ~vlllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~-~~~lvGhS 88 (271)
|+|+|=||.+.. ....+..+...+.|++++.+-.+-...... .-.+...++.+...+......+. ++.+-..|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FS 75 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWP-----SKRLAPAADKLLELLSDSQSASPPPILFHSFS 75 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeee-----ccchHHHHHHHHHHhhhhccCCCCCEEEEEEE
Confidence 467777887544 445666666666899999988663221111 12445556666666655443212 79999999
Q ss_pred hhhHHHHHHHHh-h---------ccccceEEEeecCCCC
Q 045862 89 SGTYMACFLCLF-R---------ANRIKALVNLSVVFNP 117 (271)
Q Consensus 89 ~Gg~ia~~~a~~-~---------p~~v~~lvl~~~~~~~ 117 (271)
.||...+..... + -.++.++|+-+++...
T Consensus 76 nGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~ 114 (240)
T PF05705_consen 76 NGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIP 114 (240)
T ss_pred CchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcc
Confidence 988766654331 1 1237888877776544
No 177
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.51 E-value=0.00043 Score=48.99 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=30.7
Q ss_pred HHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 61 CFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 61 ~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.+...+.+..+++.... .++++.|||+||.+|..++....
T Consensus 47 ~~~~~~~l~~~~~~~~~--~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 47 YDQILDALKELVEKYPD--YSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHHSTT--SEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccC--ccchhhccchHHHHHHHHHHhhh
Confidence 34555666666666664 78999999999999999998754
No 178
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.44 E-value=0.0021 Score=52.55 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=67.3
Q ss_pred CceEEEEeccCCCccchHHHHHH------HhhCCCeEEeeCCCCCC---CCCCCcccCcchHHhHHHHHHHHHHHhCCCC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIA------LASLSYRAVAPDLSGFG---DTDELLEMTSYTCFHVIGDLIGLIDLVAPND 79 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~------l~~~g~~vi~~D~~G~G---~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 79 (271)
.|.||++||.|-.-......+.. +-+ .-.++++|+.-.. .... -+.-+.+.++-...+++..|-
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~----yPtQL~qlv~~Y~~Lv~~~G~-- 194 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHK----YPTQLRQLVATYDYLVESEGN-- 194 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCc----CchHHHHHHHHHHHHHhccCC--
Confidence 58999999998644443332222 223 2588888876432 1111 234566666777777766677
Q ss_pred CceEEEEeChhhHHHHHHHHhhc--c---ccceEEEeecCCCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRA--N---RIKALVNLSVVFNP 117 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p--~---~v~~lvl~~~~~~~ 117 (271)
++++|+|-|.||.+++.+..... . .=+++|+++|-..+
T Consensus 195 ~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 195 KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 89999999999999987765421 1 23789999986655
No 179
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.44 E-value=0.00059 Score=55.46 Aligned_cols=84 Identities=17% Similarity=0.050 Sum_probs=64.8
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh----CCCCCceEEE
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----APNDEKMFVV 85 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~~lv 85 (271)
..-||+.|=|+..+.=+.+.++|+++|+.|+-+|-.-|=+|. .+.++.++|+..+++.. +. .++.|+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-------rtPe~~a~Dl~r~i~~y~~~w~~--~~~~li 331 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE-------RTPEQIAADLSRLIRFYARRWGA--KRVLLI 331 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc-------CCHHHHHHHHHHHHHHHHHhhCc--ceEEEE
Confidence 346777777777777778899999999999999966555553 45678889988888765 44 789999
Q ss_pred EeChhhHHHHHHHHhhc
Q 045862 86 GHDSGTYMACFLCLFRA 102 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p 102 (271)
|+|+|+-|.-....+.|
T Consensus 332 GySfGADvlP~~~n~L~ 348 (456)
T COG3946 332 GYSFGADVLPFAYNRLP 348 (456)
T ss_pred eecccchhhHHHHHhCC
Confidence 99999987665555544
No 180
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.43 E-value=0.00083 Score=58.79 Aligned_cols=109 Identities=14% Similarity=0.043 Sum_probs=62.2
Q ss_pred CceEEEEeccCC---Cc-cchHHHHHHHhhCCCeEEeeCCC----CCCCCCCCccc-CcchHHhHHHHH---HHHHHHhC
Q 045862 9 GPEILFLYVFPE---LR-YSWCHQTIALASLSYRAVAPDLS----GFGDTDELLEM-TSYTCFHVIGDL---IGLIDLVA 76 (271)
Q Consensus 9 ~~~vlllHG~~~---~~-~~~~~~~~~l~~~g~~vi~~D~~----G~G~S~~~~~~-~~~~~~~~~~~l---~~~l~~l~ 76 (271)
-|.+|+|||.+. ++ .....-...++.++.=|+++.+| |+-.+...... .++.+.|+...| .+-|...|
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 389999999753 22 12222334455557999999987 33333222211 456666665444 44445555
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhh--ccccceEEEeecCCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFR--ANRIKALVNLSVVFNP 117 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~~ 117 (271)
-+-++|.|+|||-||..+..+...- ...+.++|+.++....
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 4225799999999998777666652 2469999999985443
No 181
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.43 E-value=0.00069 Score=54.27 Aligned_cols=88 Identities=15% Similarity=0.130 Sum_probs=50.2
Q ss_pred HHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC-CCceEEEEeChhhHHHHHHHHhh----c
Q 045862 28 QTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN-DEKMFVVGHDSGTYMACFLCLFR----A 102 (271)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~~~lvGhS~Gg~ia~~~a~~~----p 102 (271)
++..+.++||-|+++|+.|.|..-.......++.-+.+....++....++. +.++.+.|||-||.-++..|... |
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YAp 97 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAP 97 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCc
Confidence 345555669999999999999722111111222222222222222222331 25899999999998887666443 3
Q ss_pred cc---cceEEEeecCC
Q 045862 103 NR---IKALVNLSVVF 115 (271)
Q Consensus 103 ~~---v~~lvl~~~~~ 115 (271)
+. +.+.+..+++.
T Consensus 98 eL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 98 ELNRDLVGAAAGGPPA 113 (290)
T ss_pred ccccceeEEeccCCcc
Confidence 32 55555555443
No 182
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.32 E-value=0.0018 Score=54.17 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=82.0
Q ss_pred CCceEEEEeccCCCccchH-----HHHHHHhhCCCeEEeeCCCCCCCCCCCccc-----CcchHHhHHHHHHHHHHHhCC
Q 045862 8 QGPEILFLYVFPELRYSWC-----HQTIALASLSYRAVAPDLSGFGDTDELLEM-----TSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~-----~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~~l~~~l~~l~~ 77 (271)
+||..|+|-|=+.-...|- .....-++-|-.|+..+.|-+|+|.+..+. .-.+..+...|+..+|+++..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 4788888877666665562 222333344789999999999988654421 234778888999999988742
Q ss_pred ----CC-CceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 78 ----ND-EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 78 ----~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.+ .|++.+|-|+.|.++..+=..+|+.+.+-|..+++...
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 11 38999999999999999999999999988888877654
No 183
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.26 E-value=0.0015 Score=54.81 Aligned_cols=107 Identities=12% Similarity=0.026 Sum_probs=68.2
Q ss_pred CceEEEEeccC---CCccchHHHHHHHhhCC-CeEEeeCCC-C-CCCC---CCCc---ccCcchHHhH---HHHHHHHHH
Q 045862 9 GPEILFLYVFP---ELRYSWCHQTIALASLS-YRAVAPDLS-G-FGDT---DELL---EMTSYTCFHV---IGDLIGLID 73 (271)
Q Consensus 9 ~~~vlllHG~~---~~~~~~~~~~~~l~~~g-~~vi~~D~~-G-~G~S---~~~~---~~~~~~~~~~---~~~l~~~l~ 73 (271)
.|.+|+|||.+ +++.....--..|+++| +-|+++++| | +|.- .-.. ...+..+.++ .+.+.+-|+
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe 173 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIE 173 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHH
Confidence 48999999975 34444222236688876 778888876 1 2211 1110 0012333333 355667777
Q ss_pred HhCCCCCceEEEEeChhhHHHHHHHHhhcc---ccceEEEeecCCC
Q 045862 74 LVAPNDEKMFVVGHDSGTYMACFLCLFRAN---RIKALVNLSVVFN 116 (271)
Q Consensus 74 ~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 116 (271)
+.|-+.++|.|+|+|-||+.++.+.+. |. .+.++|+.++...
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 887654789999999999888877663 53 5788888887664
No 184
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.23 E-value=0.0016 Score=49.80 Aligned_cols=90 Identities=12% Similarity=-0.012 Sum_probs=54.3
Q ss_pred cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC--CCceEEEEeChhhHHHHHHHHh
Q 045862 23 YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN--DEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
-.|+.+.+.|+++||.|++.-+.- |.- +.. ....-.+.+-..+..+.+.-+.. .-|+.-+|||+|+.+-+.+.+.
T Consensus 34 itYr~lLe~La~~Gy~ViAtPy~~-tfD-H~~-~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~ 110 (250)
T PF07082_consen 34 ITYRYLLERLADRGYAVIATPYVV-TFD-HQA-IAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSL 110 (250)
T ss_pred HHHHHHHHHHHhCCcEEEEEecCC-CCc-HHH-HHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhh
Confidence 358999999999999999987641 100 000 00011112222222222222221 0267889999999999998888
Q ss_pred hccccceEEEeecCC
Q 045862 101 RANRIKALVNLSVVF 115 (271)
Q Consensus 101 ~p~~v~~lvl~~~~~ 115 (271)
++..-++.++++-..
T Consensus 111 ~~~~r~gniliSFNN 125 (250)
T PF07082_consen 111 FDVERAGNILISFNN 125 (250)
T ss_pred ccCcccceEEEecCC
Confidence 766567788888544
No 185
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.20 E-value=0.0052 Score=45.08 Aligned_cols=108 Identities=13% Similarity=0.017 Sum_probs=64.5
Q ss_pred ceEEEEeccCCCccchH--------HHHHH----Hh--hCCCeEEeeCCCCCCCCC-CC-cccCcchHHhHHHHHHHHHH
Q 045862 10 PEILFLYVFPELRYSWC--------HQTIA----LA--SLSYRAVAPDLSGFGDTD-EL-LEMTSYTCFHVIGDLIGLID 73 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~--------~~~~~----l~--~~g~~vi~~D~~G~G~S~-~~-~~~~~~~~~~~~~~l~~~l~ 73 (271)
...++++|.+.+..... .+... +. ..+-+|-++-|.||-.-. .. .....-.-+.-+.+|..+++
T Consensus 20 ~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~~ 99 (177)
T PF06259_consen 20 HVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARFLD 99 (177)
T ss_pred eeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHHHH
Confidence 47899999987554321 11111 11 112356666666654221 10 11112234555566666666
Q ss_pred HhCC---CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 74 LVAP---NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 74 ~l~~---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.|.- ++.++.++|||+|+.++-.++...+..+..+|+++++-..
T Consensus 100 gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 100 GLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 5532 1257899999999999998887767789999999976543
No 186
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.19 E-value=0.0014 Score=53.57 Aligned_cols=107 Identities=13% Similarity=0.082 Sum_probs=73.1
Q ss_pred ceEEEEeccCCCccchHH---HHHHHhhC-CCeEEeeCCCCCCCCCCCccc--------CcchHHhHHHHHHHHHHHhCC
Q 045862 10 PEILFLYVFPELRYSWCH---QTIALASL-SYRAVAPDLSGFGDTDELLEM--------TSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~---~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~--------~~~~~~~~~~~l~~~l~~l~~ 77 (271)
-||+|--|.-++-+.|.. ++-.++.+ +--++..+.|-+|+|-+-... .-.+.++...|...++.++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 467777787776665532 23333332 456899999999999654421 123555566666666666532
Q ss_pred ----CCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 78 ----NDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 78 ----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
...+|+.+|-|+||++|..+=.+||..|.+...-+++..
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 125899999999999999999999998887776665543
No 187
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.17 E-value=0.0055 Score=52.58 Aligned_cols=96 Identities=14% Similarity=0.169 Sum_probs=57.7
Q ss_pred CceEEEEeccC--CCccc----hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHH--------H
Q 045862 9 GPEILFLYVFP--ELRYS----WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLID--------L 74 (271)
Q Consensus 9 ~~~vlllHG~~--~~~~~----~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~--------~ 74 (271)
.|.++++||.+ ....+ |........+. -.|-++|++.- . ...++...++-+..+.+ +
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~------i--gG~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNP------I--GGANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCC------C--CCcchHHHHHHHHHHhhhhhhhhhcc
Confidence 46799999998 22222 33333333333 56777777631 0 12344455555444444 2
Q ss_pred hCCCCCceEEEEeChhhHHHHHHHHhhc-cccceEEEeecCC
Q 045862 75 VAPNDEKMFVVGHDSGTYMACFLCLFRA-NRIKALVNLSVVF 115 (271)
Q Consensus 75 l~~~~~~~~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~~~~ 115 (271)
+.. .+++|+|.|||+.++..++...- .-|.++|.++-++
T Consensus 247 fph--a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl 286 (784)
T KOG3253|consen 247 FPH--APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPL 286 (784)
T ss_pred CCC--CceEEEecccCceeeEEeccccCCceEEEEEEecccc
Confidence 233 68999999999888777765543 2388888888554
No 188
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.04 E-value=0.0014 Score=50.75 Aligned_cols=53 Identities=19% Similarity=0.252 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHH-hCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 63 HVIGDLIGLIDL-VAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 63 ~~~~~l~~~l~~-l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
-+.+.+.-++++ ..++.++-.++|||+||.+++.....+|+.+...++++|..
T Consensus 119 fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 119 FLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 344455555554 34433678999999999999999999999999999999876
No 189
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.02 E-value=0.0068 Score=49.93 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=31.0
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
|++++|+|.||.+|...|.-.|-.+.+++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998888876665543
No 190
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.98 E-value=0.0027 Score=48.63 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=30.8
Q ss_pred CceEEEEeChhhHHHHHHHHhh----ccccceEEEeecCCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFR----ANRIKALVNLSVVFN 116 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 116 (271)
+++.+.|||.||.+|+.+|... .++|.++...++|..
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 4699999999999999999884 357888888887653
No 191
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.92 E-value=0.0028 Score=48.98 Aligned_cols=23 Identities=35% Similarity=0.439 Sum_probs=20.3
Q ss_pred CceEEEEeChhhHHHHHHHHhhc
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.++++.|||+||.+|..++....
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHHH
Confidence 68999999999999999888644
No 192
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.90 E-value=0.0044 Score=52.14 Aligned_cols=106 Identities=19% Similarity=0.071 Sum_probs=70.1
Q ss_pred CceEEEEeccCCCccchHHHHHH-------------------HhhCCCeEEeeC-CCCCCCCCCCcccCcchHHhHHHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIA-------------------LASLSYRAVAPD-LSGFGDTDELLEMTSYTCFHVIGDL 68 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~-------------------l~~~g~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~l 68 (271)
.|.++++.|.++++..|..+.+. +.+. -+++.+| .-|.|.|....+...-+.....+|+
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchhH
Confidence 57899999999999998877421 1121 3799999 5588988753322344555555665
Q ss_pred HHHHHHh-------CCCCCceEEEEeChhhHHHHHHHHhhccc---cceEEEeecCC
Q 045862 69 IGLIDLV-------APNDEKMFVVGHDSGTYMACFLCLFRANR---IKALVNLSVVF 115 (271)
Q Consensus 69 ~~~l~~l-------~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~---v~~lvl~~~~~ 115 (271)
..+.+.. .-...+.+|+|-|+||.-+-.+|...-++ .++++++.+..
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 5555442 22004899999999998888888765442 55666655433
No 193
>PLN02209 serine carboxypeptidase
Probab=96.90 E-value=0.0073 Score=51.20 Aligned_cols=108 Identities=11% Similarity=-0.009 Sum_probs=66.9
Q ss_pred CceEEEEeccCCCccchHHHHH-----------------------HHhhCCCeEEeeC-CCCCCCCCCCcccCcchHHhH
Q 045862 9 GPEILFLYVFPELRYSWCHQTI-----------------------ALASLSYRAVAPD-LSGFGDTDELLEMTSYTCFHV 64 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~-----------------------~l~~~g~~vi~~D-~~G~G~S~~~~~~~~~~~~~~ 64 (271)
.|.|+++.|.++++..+..+.+ .+.+. .+++.+| ..|.|.|.........+-++.
T Consensus 68 ~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (437)
T PLN02209 68 DPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQPVGSGFSYSKTPIERTSDTSE 146 (437)
T ss_pred CCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 5899999999998887754421 11222 5899999 558898854331111222234
Q ss_pred HHHHHHHHHHh----C-CCCCceEEEEeChhhHHHHHHHHhhc----------cccceEEEeecCCCC
Q 045862 65 IGDLIGLIDLV----A-PNDEKMFVVGHDSGTYMACFLCLFRA----------NRIKALVNLSVVFNP 117 (271)
Q Consensus 65 ~~~l~~~l~~l----~-~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lvl~~~~~~~ 117 (271)
++++..++... . ..+.+++|.|.|+||..+-.+|...- =.++++++.++...+
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 45555555442 1 11158999999999976666665421 135788888875544
No 194
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.76 E-value=0.0095 Score=50.49 Aligned_cols=109 Identities=11% Similarity=-0.025 Sum_probs=65.3
Q ss_pred CCceEEEEeccCCCccchHHHH---H-------------H-------HhhCCCeEEeeC-CCCCCCCCCCcccCcc----
Q 045862 8 QGPEILFLYVFPELRYSWCHQT---I-------------A-------LASLSYRAVAPD-LSGFGDTDELLEMTSY---- 59 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~---~-------------~-------l~~~g~~vi~~D-~~G~G~S~~~~~~~~~---- 59 (271)
+.|.|+.+.|.++++..+..+. + . +.+. .+++.+| .-|.|.|.........
T Consensus 65 ~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGtGfSy~~~~~~~~~d~~ 143 (433)
T PLN03016 65 EDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQPVGSGFSYSKTPIDKTGDIS 143 (433)
T ss_pred cCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCCCCCCccCCCCCCCccCCHH
Confidence 3589999999998887553322 1 1 1222 6899999 5589998644321111
Q ss_pred hHHhHHHHHHHHHHHhC-CCCCceEEEEeChhhHHHHHHHHhhc----------cccceEEEeecCCCC
Q 045862 60 TCFHVIGDLIGLIDLVA-PNDEKMFVVGHDSGTYMACFLCLFRA----------NRIKALVNLSVVFNP 117 (271)
Q Consensus 60 ~~~~~~~~l~~~l~~l~-~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lvl~~~~~~~ 117 (271)
..+++...+..+++... ....+++|+|.|+||..+-.+|...- =.++++++-++...+
T Consensus 144 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 144 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCc
Confidence 12233344444443321 11268999999999976666665421 146788888875443
No 195
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.72 E-value=0.01 Score=55.00 Aligned_cols=97 Identities=13% Similarity=0.087 Sum_probs=68.7
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEe
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGh 87 (271)
++|+++|+|..-+....+..++..|. .|-||.-..... ..-++++.+.-...-++.+... +|..|+|+
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~v-P~dSies~A~~yirqirkvQP~-GPYrl~GY 2189 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAV-PLDSIESLAAYYIRQIRKVQPE-GPYRLAGY 2189 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccC-CcchHHHHHHHHHHHHHhcCCC-CCeeeecc
Confidence 47899999999887777777665542 334442211110 2457888888777777776643 79999999
Q ss_pred ChhhHHHHHHHHhhcc--ccceEEEeecCCC
Q 045862 88 DSGTYMACFLCLFRAN--RIKALVNLSVVFN 116 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 116 (271)
|+|+.++..+|....+ ....+|++++.+.
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999987543 4566999997653
No 196
>PLN02162 triacylglycerol lipase
Probab=96.64 E-value=0.0062 Score=51.08 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=26.6
Q ss_pred HhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHH
Q 045862 62 FHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~ 99 (271)
.+..+.+..++..... .++++.|||+||.+|..+|.
T Consensus 262 ~~I~~~L~~lL~k~p~--~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKN--LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCC--ceEEEEecChHHHHHHHHHH
Confidence 3444555556655444 68999999999999999865
No 197
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.63 E-value=0.0057 Score=50.25 Aligned_cols=107 Identities=13% Similarity=0.173 Sum_probs=82.0
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCc-ccCcchHHhHHHHHHHHHHHhCC-CCCceEEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELL-EMTSYTCFHVIGDLIGLIDLVAP-NDEKMFVV 85 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~l~~~l~~l~~-~~~~~~lv 85 (271)
+.|+|+..-|++.+..-...=...|.+ -+-+.++.|-||.|.+.+ ++...++.+-|.|...+++++.. =.++.+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceec
Confidence 468999999998765433322233333 367999999999998766 45677999999999999888741 01689999
Q ss_pred EeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 86 GHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
|-|=||+.++.+=.-||+-|.+.|.--++..
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 9999999999988889999999887665543
No 198
>PLN00413 triacylglycerol lipase
Probab=96.52 E-value=0.0089 Score=50.30 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHh
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
++.+.+..+++.... .++++.|||+||.+|..+|..
T Consensus 269 ~i~~~Lk~ll~~~p~--~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQNPT--SKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHCCC--CeEEEEecCHHHHHHHHHHHH
Confidence 456677777776655 789999999999999998853
No 199
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.43 E-value=0.1 Score=41.09 Aligned_cols=103 Identities=12% Similarity=0.024 Sum_probs=74.0
Q ss_pred CceEEEEeccCCCc-cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEe
Q 045862 9 GPEILFLYVFPELR-YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 9 ~~~vlllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGh 87 (271)
.|.||++-.+.+.. ...+...+.|... ..|+.-||----.-+... ..+.++++++-+.+.+..+|. ..++++.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~--G~FdldDYIdyvie~~~~~Gp---~~hv~aV 176 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEA--GHFDLDDYIDYVIEMINFLGP---DAHVMAV 176 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeeccc--CCccHHHHHHHHHHHHHHhCC---CCcEEEE
Confidence 35677777776654 4466777888775 789999986443332222 578999999999999999997 4888888
Q ss_pred ChhhH-----HHHHHHHhhccccceEEEeecCCCC
Q 045862 88 DSGTY-----MACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 88 S~Gg~-----ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
|-=+. +++..+...|..-.++++++++...
T Consensus 177 CQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 177 CQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred ecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 87653 4444444456677899999987754
No 200
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.37 E-value=0.01 Score=44.49 Aligned_cols=70 Identities=13% Similarity=0.035 Sum_probs=47.4
Q ss_pred HHHhhCCCeEEeeCCCCCCCCCCC-c------ccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 30 IALASLSYRAVAPDLSGFGDTDEL-L------EMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 30 ~~l~~~g~~vi~~D~~G~G~S~~~-~------~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
..|... -+|++|=+|-....... . ........+..+.....|++.+-. ++++|+|||-|+.+++.+...+
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~G-RPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNG-RPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCC-CCEEEEEeChHHHHHHHHHHHH
Confidence 445554 68888887744322111 0 012345667777778888887652 6999999999999999998875
No 201
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.32 E-value=0.053 Score=44.69 Aligned_cols=153 Identities=10% Similarity=0.111 Sum_probs=87.9
Q ss_pred HHHHHHHHHh---CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCCCCCCCcchHHHHhhhhHHHHHHHHH
Q 045862 66 GDLIGLIDLV---APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNPNTSEPGEIEAEFEQISTEIVIKEFL 142 (271)
Q Consensus 66 ~~l~~~l~~l---~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (271)
+.+.++++.. .+ +++++.|.|==|..++..|+ -.+||.+++-+.-... .....+...+
T Consensus 157 D~vq~~~~~~~~~~i--~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~L----------------N~~~~l~h~y 217 (367)
T PF10142_consen 157 DAVQEFLKKKFGVNI--EKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVL----------------NMKANLEHQY 217 (367)
T ss_pred HHHHHHHHhhcCCCc--cEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccC----------------CcHHHHHHHH
Confidence 4445555544 57 89999999999999999998 5568888875553332 2233333433
Q ss_pred hhhCCCCCCCCCCCCCCCCCCccccCCCCCCcccccccc--cccccC-CcccCC----CCCcchh----chhHHhhhcCC
Q 045862 143 TLWTPDPIILPKGKGYGQPPDAIIALPGWLSDEDVNTTR--PIGTNY-CDLTSV----CGVKEYI----HKGEFRRDVPL 211 (271)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~i~~P----~G~~D~~----~~~~~~~~~~~ 211 (271)
..+...-... +..+... .....+....+..+. -.++.| ..+++| .|..|.+ ....+-..+|+
T Consensus 218 ~~yG~~ws~a-----~~dY~~~--gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G 290 (367)
T PF10142_consen 218 RSYGGNWSFA-----FQDYYNE--GITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG 290 (367)
T ss_pred HHhCCCCccc-----hhhhhHh--CchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC
Confidence 3333111000 0000000 001111111111111 122223 466888 6666654 36777788887
Q ss_pred CceEEEeCCCCccccccChHHHHHHHHHHHhhhhhh
Q 045862 212 LEEITIMEGVGHFINQEKGHQLETEIGTSRGEKKQG 247 (271)
Q Consensus 212 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 247 (271)
-+.+..+|+++|..-. ..+.+.+..|+.....+
T Consensus 291 ~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 291 EKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred CeeEEeCCCCCcccch---HHHHHHHHHHHHHHHcC
Confidence 7588999999998776 67777888888876543
No 202
>PLN02571 triacylglycerol lipase
Probab=96.31 E-value=0.0067 Score=50.37 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=29.0
Q ss_pred HhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 62 FHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
+++..+|..+++...-.+-++++.|||+||.+|+..|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 4555677777766543112689999999999999988753
No 203
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.29 E-value=0.012 Score=46.48 Aligned_cols=109 Identities=12% Similarity=0.016 Sum_probs=61.4
Q ss_pred CceEEEEeccC--CCccchHHHHHHHhhC---CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-CC--CCC
Q 045862 9 GPEILFLYVFP--ELRYSWCHQTIALASL---SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV-AP--NDE 80 (271)
Q Consensus 9 ~~~vlllHG~~--~~~~~~~~~~~~l~~~---g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l-~~--~~~ 80 (271)
-|.+++.||-- .+...+..+-..+.+. .--++.+|.----+....-.........++++|.=.++.. .. ..+
T Consensus 98 ~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~ 177 (299)
T COG2382 98 YPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADAD 177 (299)
T ss_pred ccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccCC
Confidence 47888998753 2333444443333331 1345555532100000000001223445555555555442 11 014
Q ss_pred ceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 81 KMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.-+|.|-|+||.+++..+.++|+++-.++..++....
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 5789999999999999999999999999988876643
No 204
>PLN02454 triacylglycerol lipase
Probab=96.26 E-value=0.0084 Score=49.77 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=24.0
Q ss_pred HHHHHHHHHhCCCCC--ceEEEEeChhhHHHHHHHHhh
Q 045862 66 GDLIGLIDLVAPNDE--KMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~--~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
..|..+++...- . ++++.|||+||.+|+.+|...
T Consensus 214 ~~V~~l~~~Yp~--~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 214 AKIKELLERYKD--EKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHhCCC--CCceEEEEecCHHHHHHHHHHHHH
Confidence 344444444433 3 499999999999999998653
No 205
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.25 E-value=0.14 Score=40.74 Aligned_cols=103 Identities=19% Similarity=0.136 Sum_probs=60.9
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc--------cCcch--------HHhHHHHHHHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE--------MTSYT--------CFHVIGDLIGLI 72 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--------~~~~~--------~~~~~~~l~~~l 72 (271)
-|.+++.||++.....-......++..++.++..+....|.+..... ...+. ..-+..+.....
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLG 128 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHHh
Confidence 36799999999988886667777877778877777533332221110 00111 111111111111
Q ss_pred HHhCCCCCceEEEEeChhhHHHHHHHHhhcc--ccceEEEeecCC
Q 045862 73 DLVAPNDEKMFVVGHDSGTYMACFLCLFRAN--RIKALVNLSVVF 115 (271)
Q Consensus 73 ~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 115 (271)
. .. ++....|+++|+..+..++...+. ....+++++.+.
T Consensus 129 ~--~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 169 (299)
T COG1073 129 A--SL--GPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESL 169 (299)
T ss_pred h--hc--CcceEEEEEeeccchHHHhhcchhHHHhhcccceeecc
Confidence 1 12 578999999999999998888763 344555555444
No 206
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.23 E-value=0.021 Score=42.27 Aligned_cols=102 Identities=15% Similarity=0.020 Sum_probs=52.9
Q ss_pred eEEEEeccCCCccc---hHHHHHHHhhC-C---CeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh--CCCCCc
Q 045862 11 EILFLYVFPELRYS---WCHQTIALASL-S---YRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV--APNDEK 81 (271)
Q Consensus 11 ~vlllHG~~~~~~~---~~~~~~~l~~~-g---~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~~ 81 (271)
.||+..|.+..... -..+...|++. | ..+..+++|--.... . -..+...=+.++..+++.. .-++.+
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~k 82 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTK 82 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCC
Confidence 46666666543321 12333444432 2 445556666322111 0 1123444444444444332 112268
Q ss_pred eEEEEeChhhHHHHHHHHh------hccccceEEEeecCCC
Q 045862 82 MFVVGHDSGTYMACFLCLF------RANRIKALVNLSVVFN 116 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~~~ 116 (271)
++|+|+|.|+.++..++.. ..++|.++++++-+..
T Consensus 83 ivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 83 IVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp EEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred EEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 9999999999999999877 3467999999987653
No 207
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.11 E-value=0.025 Score=46.16 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=31.3
Q ss_pred CceEEEEeChhhHHHHHHHHhhccc-----cceEEEeecCCCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANR-----IKALVNLSVVFNP 117 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~-----v~~lvl~~~~~~~ 117 (271)
.|+.|||||+|+.+.........++ |+.+++++++...
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 7899999999999988777665543 8999999987654
No 208
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.04 E-value=0.022 Score=40.99 Aligned_cols=111 Identities=16% Similarity=0.113 Sum_probs=64.8
Q ss_pred cccccCC-CceEEEEeccCCCccchHHH--HHHH---hhCCCeEEeeCCCCCCCCCCCcc-cCcc-hHHhHHHHHHHHHH
Q 045862 2 HVAEKGQ-GPEILFLYVFPELRYSWCHQ--TIAL---ASLSYRAVAPDLSGFGDTDELLE-MTSY-TCFHVIGDLIGLID 73 (271)
Q Consensus 2 ~y~~~g~-~~~vlllHG~~~~~~~~~~~--~~~l---~~~g~~vi~~D~~G~G~S~~~~~-~~~~-~~~~~~~~l~~~l~ 73 (271)
.+..+|- |.+||..+--++.-..|..+ +..| .+.| +|-.+.+-|-..-+-... .... ..+....--..+++
T Consensus 18 el~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G-~vQlft~~gldsESf~a~h~~~adr~~rH~AyerYv~e 96 (227)
T COG4947 18 ELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEG-LVQLFTLSGLDSESFLATHKNAADRAERHRAYERYVIE 96 (227)
T ss_pred hhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcC-cEEEEEecccchHhHhhhcCCHHHHHHHHHHHHHHHHH
Confidence 3455663 66777777777666666533 2333 2334 333333333321111110 0111 22223333334444
Q ss_pred HhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 74 LVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 74 ~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
+.-+ ...++-|.||||..|+.+.-++|+.+.++|.+++.+
T Consensus 97 Ealp--gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 97 EALP--GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred hhcC--CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 4444 678889999999999999999999999999999876
No 209
>PLN02408 phospholipase A1
Probab=95.97 E-value=0.013 Score=47.97 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
+..+.|..+++...-...++++.|||+||.+|..+|....
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 3445666666665431125899999999999999887654
No 210
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.96 E-value=0.0085 Score=49.08 Aligned_cols=88 Identities=10% Similarity=0.045 Sum_probs=53.0
Q ss_pred ceEEEEeccCC-CccchHHHHHHHhhCCCeEEeeCCCCC-CCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEe
Q 045862 10 PEILFLYVFPE-LRYSWCHQTIALASLSYRAVAPDLSGF-GDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 10 ~~vlllHG~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGh 87 (271)
--+|++||+-+ +...|...+...... +.=..+..+|+ |......+....--...++++.+.+....+ +++..+||
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si--~kISfvgh 157 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI--EKISFVGH 157 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhcccc--ceeeeeee
Confidence 36999999988 677788877777664 22213333332 222111110112223455556666655667 89999999
Q ss_pred ChhhHHHHHHHHh
Q 045862 88 DSGTYMACFLCLF 100 (271)
Q Consensus 88 S~Gg~ia~~~a~~ 100 (271)
|+||.++..+...
T Consensus 158 SLGGLvar~AIgy 170 (405)
T KOG4372|consen 158 SLGGLVARYAIGY 170 (405)
T ss_pred ecCCeeeeEEEEe
Confidence 9999988755443
No 211
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.89 E-value=0.034 Score=48.99 Aligned_cols=108 Identities=15% Similarity=0.085 Sum_probs=59.3
Q ss_pred CceEEEEeccCC---CccchHH--HHHHHhhCCCeEEeeCCC----CCCCCCCCcccCcchHHhHHHHH---HHHHHHhC
Q 045862 9 GPEILFLYVFPE---LRYSWCH--QTIALASLSYRAVAPDLS----GFGDTDELLEMTSYTCFHVIGDL---IGLIDLVA 76 (271)
Q Consensus 9 ~~~vlllHG~~~---~~~~~~~--~~~~l~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~~l---~~~l~~l~ 76 (271)
-|++|+|||.+. ++..+.. ....+..+..=|+++.+| |+...........+.+.++...+ ..-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 478999999863 3222311 122223323445566655 33322211112455555555444 44444555
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhh--ccccceEEEeecCCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFR--ANRIKALVNLSVVFN 116 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~~ 116 (271)
-+-+++.|+|||.||..+..+...- ...+.+.|..++...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 3326899999999999887766532 134666666665543
No 212
>PLN02310 triacylglycerol lipase
Probab=95.80 E-value=0.027 Score=46.74 Aligned_cols=39 Identities=18% Similarity=0.266 Sum_probs=27.6
Q ss_pred HhHHHHHHHHHHHhCCC--CCceEEEEeChhhHHHHHHHHh
Q 045862 62 FHVIGDLIGLIDLVAPN--DEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~--~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
+++.+.|..+++.+.-. +-++++.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34556666777655310 1379999999999999998865
No 213
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.71 E-value=0.037 Score=48.32 Aligned_cols=111 Identities=12% Similarity=0.164 Sum_probs=75.7
Q ss_pred CCCceEEEEeccCCCc--cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCc------ccCcchHHhHHHHHHHHHHHhCCC
Q 045862 7 GQGPEILFLYVFPELR--YSWCHQTIALASLSYRAVAPDLSGFGDTDELL------EMTSYTCFHVIGDLIGLIDLVAPN 78 (271)
Q Consensus 7 g~~~~vlllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~l~~~l~~l~~~ 78 (271)
|++|.+|..-|.-+.+ ..|....-.|.++|+-.-.--.||-|.-...- -....|+.++++....+++.--.+
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~ 525 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTS 525 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCC
Confidence 4556565555544432 23554445577888665555678876554321 113568888888888888653221
Q ss_pred CCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 79 DEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 79 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.+.+.++|-|.||++.-.++...|+.++++|+--|....
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred ccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 157999999999999999999999999999988876644
No 214
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.71 E-value=0.013 Score=50.76 Aligned_cols=107 Identities=16% Similarity=0.178 Sum_probs=73.3
Q ss_pred CCCceEEEEeccCCCccc----hHHHHHHHhhCCCeEEeeCCCCCCCCCCCc------ccCcchHHhHHHHHHHHHHHhC
Q 045862 7 GQGPEILFLYVFPELRYS----WCHQTIALASLSYRAVAPDLSGFGDTDELL------EMTSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~----~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~l~~~l~~l~ 76 (271)
|+.| +||||.|+-..+ |..---.|.+.|+-....+.||-|+-...- .....+++++....+.+++.-=
T Consensus 468 g~~P--~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gy 545 (712)
T KOG2237|consen 468 GSKP--LLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGY 545 (712)
T ss_pred CCCc--eEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCC
Confidence 3456 455555554433 443333455678888888999987654322 1134578888888888776421
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
....+..+.|.|-||.++-.++.++|+.+.++|+--|..
T Consensus 546 t~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 546 TQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred CCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 111678999999999999999999999998888766655
No 215
>PLN02324 triacylglycerol lipase
Probab=95.67 E-value=0.021 Score=47.44 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHh
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
++...|..+++...-.+-++++.|||+||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455666776654211268999999999999998865
No 216
>PLN02934 triacylglycerol lipase
Probab=95.66 E-value=0.021 Score=48.54 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=28.9
Q ss_pred HhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHh
Q 045862 62 FHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
......+..+++...- .++++.|||+||.+|..+|..
T Consensus 305 ~~v~~~lk~ll~~~p~--~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN--AKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCCC--CeEEEeccccHHHHHHHHHHH
Confidence 3456667777776654 689999999999999999853
No 217
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.63 E-value=0.079 Score=43.22 Aligned_cols=81 Identities=10% Similarity=-0.013 Sum_probs=49.1
Q ss_pred CeEEeeCCC-CCCCCCCCcccCcchHHhHHHHHHHHHHH----hC-CCCCceEEEEeChhhHHHHHHHHhhc--------
Q 045862 37 YRAVAPDLS-GFGDTDELLEMTSYTCFHVIGDLIGLIDL----VA-PNDEKMFVVGHDSGTYMACFLCLFRA-------- 102 (271)
Q Consensus 37 ~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~l~~~l~~----l~-~~~~~~~lvGhS~Gg~ia~~~a~~~p-------- 102 (271)
.+|+.+|.| |.|.|-........+-+..++|+..+|.. .. ..+.+++|.|-|+||..+-.+|...-
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 478999988 89988644311111112333555544443 21 11268999999999987766666421
Q ss_pred --cccceEEEeecCCCC
Q 045862 103 --NRIKALVNLSVVFNP 117 (271)
Q Consensus 103 --~~v~~lvl~~~~~~~ 117 (271)
=.++++++-++...+
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 136788887775544
No 218
>PLN02802 triacylglycerol lipase
Probab=95.42 E-value=0.028 Score=47.81 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
++.+.|..+++...-.+-++++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344556666665532112689999999999999988764
No 219
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.27 E-value=0.042 Score=36.56 Aligned_cols=50 Identities=10% Similarity=0.186 Sum_probs=43.5
Q ss_pred CCCcchhc----hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 194 CGVKEYIH----KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 194 ~G~~D~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
.++.|+.+ ++.+++.++++ +++.+++.||........-+.+.+.+||.+-
T Consensus 41 ~~~~Dp~TP~~~a~~~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 41 GGTHDPVTPYEGARAMAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred ecCcCCCCcHHHHHHHHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 78999885 77899999999 9999999999988766678888999999865
No 220
>PLN02753 triacylglycerol lipase
Probab=95.21 E-value=0.033 Score=47.55 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHhCC---CCCceEEEEeChhhHHHHHHHHh
Q 045862 63 HVIGDLIGLIDLVAP---NDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~---~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
++...|..+++.... .+-++++.|||+||.+|+.+|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344556666665532 11479999999999999998864
No 221
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.13 E-value=0.033 Score=47.52 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHhCC--CCCceEEEEeChhhHHHHHHHHhh
Q 045862 63 HVIGDLIGLIDLVAP--NDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~--~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
+..++|..+++.+.- .+-++++.|||+||.+|+..|...
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 455677777766531 013699999999999999988653
No 222
>PLN02719 triacylglycerol lipase
Probab=94.97 E-value=0.043 Score=46.78 Aligned_cols=38 Identities=18% Similarity=0.272 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhCC---CCCceEEEEeChhhHHHHHHHHhh
Q 045862 64 VIGDLIGLIDLVAP---NDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 64 ~~~~l~~~l~~l~~---~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
+...|..+++...- ..-++++.|||+||.+|+.+|...
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 44555566655431 013799999999999999988653
No 223
>PLN02761 lipase class 3 family protein
Probab=94.97 E-value=0.043 Score=46.86 Aligned_cols=38 Identities=18% Similarity=0.326 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhC---C-CCCceEEEEeChhhHHHHHHHHh
Q 045862 63 HVIGDLIGLIDLVA---P-NDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 63 ~~~~~l~~~l~~l~---~-~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
++...|..+++... . .+-++++.|||+||.+|+..|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34456666666552 1 01369999999999999988864
No 224
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.94 E-value=0.39 Score=36.94 Aligned_cols=82 Identities=17% Similarity=0.061 Sum_probs=49.8
Q ss_pred CCeEEeeCCCCC-CC-CCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc------ccce
Q 045862 36 SYRAVAPDLSGF-GD-TDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN------RIKA 107 (271)
Q Consensus 36 g~~vi~~D~~G~-G~-S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~ 107 (271)
|+++..++.|.. +- +.........++.+=++.+.+.++...-.+++++++|+|.|+.++...+.+.-+ ....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 466677777751 11 100110134566666677777776532123789999999999999988877522 2346
Q ss_pred EEEeecCCCC
Q 045862 108 LVNLSVVFNP 117 (271)
Q Consensus 108 lvl~~~~~~~ 117 (271)
+|+++-+..+
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 7777755443
No 225
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.79 E-value=0.024 Score=33.76 Aligned_cols=19 Identities=16% Similarity=0.361 Sum_probs=11.4
Q ss_pred CCceEEEEeccCCCccchH
Q 045862 8 QGPEILFLYVFPELRYSWC 26 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~ 26 (271)
.+|+|+|.||+.+++..|-
T Consensus 42 ~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T--EEEEE--TT--GGGGC
T ss_pred CCCcEEEECCcccChHHHH
Confidence 4689999999999999983
No 226
>PLN02847 triacylglycerol lipase
Probab=94.15 E-value=0.098 Score=45.47 Aligned_cols=22 Identities=32% Similarity=0.366 Sum_probs=19.2
Q ss_pred CceEEEEeChhhHHHHHHHHhh
Q 045862 80 EKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
-+++++|||+||.+|..++...
T Consensus 251 YkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHH
Confidence 4899999999999999888753
No 227
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.09 E-value=0.093 Score=43.09 Aligned_cols=38 Identities=26% Similarity=0.315 Sum_probs=31.7
Q ss_pred HhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 62 FHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
..+.+++..+++...- -++.+-|||+||.+|..+|...
T Consensus 155 ~~~~~~~~~L~~~~~~--~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN--YSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcCC--cEEEEecCChHHHHHHHHHHHH
Confidence 5677788888887765 7899999999999999888763
No 228
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=94.03 E-value=0.92 Score=29.90 Aligned_cols=85 Identities=14% Similarity=0.031 Sum_probs=56.1
Q ss_pred cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhh--HHHHHHHHh
Q 045862 23 YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGT--YMACFLCLF 100 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg--~ia~~~a~~ 100 (271)
..|..+.+.+...||..=.+.++..|.+-...- ..-..+.=...|..+++.+.- .+++|||=|--. -+-..+|.+
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~-~~~~~~~K~~~i~~i~~~fP~--~kfiLIGDsgq~DpeiY~~ia~~ 87 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLF-KSGAEEHKRDNIERILRDFPE--RKFILIGDSGQHDPEIYAEIARR 87 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccc-cCCchhHHHHHHHHHHHHCCC--CcEEEEeeCCCcCHHHHHHHHHH
Confidence 345566677766678777777777765532220 001113445667788888876 899999988665 455567888
Q ss_pred hccccceEEE
Q 045862 101 RANRIKALVN 110 (271)
Q Consensus 101 ~p~~v~~lvl 110 (271)
+|++|.++.+
T Consensus 88 ~P~~i~ai~I 97 (100)
T PF09949_consen 88 FPGRILAIYI 97 (100)
T ss_pred CCCCEEEEEE
Confidence 9999998765
No 229
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.50 E-value=0.38 Score=40.96 Aligned_cols=105 Identities=11% Similarity=-0.025 Sum_probs=65.4
Q ss_pred CceEEEEeccCCCccchHHHHHHH-------------------hhCCCeEEeeCCC-CCCCCCCCccc-CcchHHhHHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIAL-------------------ASLSYRAVAPDLS-GFGDTDELLEM-TSYTCFHVIGD 67 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l-------------------~~~g~~vi~~D~~-G~G~S~~~~~~-~~~~~~~~~~~ 67 (271)
.|.||.+.|.++++..-..+ ..+ .+. -+++.+|.| |.|.|-..... ...+-+..|+|
T Consensus 73 dPlvLWLnGGPGCSSl~G~~-~E~GPf~v~~~G~tL~~N~ySWnk~-aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d 150 (454)
T KOG1282|consen 73 DPLVLWLNGGPGCSSLGGLF-EENGPFRVKYNGKTLYLNPYSWNKE-ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKD 150 (454)
T ss_pred CCEEEEeCCCCCccchhhhh-hhcCCeEEcCCCCcceeCCcccccc-ccEEEEecCCcCCccccCCCCcCcCCcHHHHHH
Confidence 58899999999988765332 222 121 479999977 78888644321 11344455555
Q ss_pred HHHHHHH----h---CCCCCceEEEEeChhhHHHHHHHHh----hc------cccceEEEeecCCCC
Q 045862 68 LIGLIDL----V---APNDEKMFVVGHDSGTYMACFLCLF----RA------NRIKALVNLSVVFNP 117 (271)
Q Consensus 68 l~~~l~~----l---~~~~~~~~lvGhS~Gg~ia~~~a~~----~p------~~v~~lvl~~~~~~~ 117 (271)
+..++.. . .- .++.|.|-|++|...-.+|.+ +. -.++++++-++...+
T Consensus 151 ~~~FL~~wf~kfPey~~--~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 151 NYEFLQKWFEKFPEYKS--NDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred HHHHHHHHHHhChhhcC--CCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCc
Confidence 5544433 2 23 689999999999655555543 21 136777777776654
No 230
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.23 E-value=0.36 Score=40.95 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=62.8
Q ss_pred CcccccCC-C-ceEEEEeccCCCccchHH--HHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC
Q 045862 1 MHVAEKGQ-G-PEILFLYVFPELRYSWCH--QTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 1 l~y~~~g~-~-~~vlllHG~~~~~~~~~~--~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~ 76 (271)
++|...|+ + |-.|...|+-. .+.|.. .++.|.. =-++.=|.|=-|.+--.. ...--....+-|...++.||
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~--PfLL~~DpRleGGaFYlG--s~eyE~~I~~~I~~~L~~Lg 353 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA--PFLLIGDPRLEGGAFYLG--SDEYEQGIINVIQEKLDYLG 353 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCC--CeEEeeccccccceeeeC--cHHHHHHHHHHHHHHHHHhC
Confidence 35667775 4 45777777754 555544 3445543 345556777777653322 11113345566778888898
Q ss_pred CCCCceEEEEeChhhHHHHHHHHhh
Q 045862 77 PNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 77 ~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
.+....+|-|-|||..=|+++++..
T Consensus 354 F~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 354 FDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred CCHHHeeeccccccchhhhhhcccC
Confidence 8556799999999999999999874
No 231
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.76 E-value=3.4 Score=34.05 Aligned_cols=106 Identities=8% Similarity=-0.102 Sum_probs=66.7
Q ss_pred eEEEEeccCCCccch-HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 11 EILFLYVFPELRYSW-CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 11 ~vlllHG~~~~~~~~-~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
+||.+=||.+..+-| ........+.||.++-+..|-+-..-... ....+......-+..++...+.+..++++--.|+
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s-~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ 118 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSAS-RRILSLSLASTRLSELLSDYNSDPCPIIFHVFSG 118 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccc-cccchhhHHHHHHHHHhhhccCCcCceEEEEecC
Confidence 667776777766554 45566677779999999988764332222 1234555555677777776663215677778999
Q ss_pred hhHHHHHHH---Hh-h-c---cccceEEEeecCCCC
Q 045862 90 GTYMACFLC---LF-R-A---NRIKALVNLSVVFNP 117 (271)
Q Consensus 90 Gg~ia~~~a---~~-~-p---~~v~~lvl~~~~~~~ 117 (271)
||...+... .. + | +...+++..+.+...
T Consensus 119 ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~ 154 (350)
T KOG2521|consen 119 NGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARS 154 (350)
T ss_pred CceeehHHHHHHHhhcCchhHhhcCCceEecccccc
Confidence 996665433 22 1 2 346667877776654
No 232
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=92.08 E-value=0.67 Score=37.19 Aligned_cols=106 Identities=14% Similarity=0.016 Sum_probs=69.9
Q ss_pred CceEEEEeccCCCcc-chHHH--------------HHHHhhCCCeEEeeCCC-CCCCCCCCcc-cCcchHHhHHHHHHHH
Q 045862 9 GPEILFLYVFPELRY-SWCHQ--------------TIALASLSYRAVAPDLS-GFGDTDELLE-MTSYTCFHVIGDLIGL 71 (271)
Q Consensus 9 ~~~vlllHG~~~~~~-~~~~~--------------~~~l~~~g~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~~l~~~ 71 (271)
.|..+.+.|.++.+. .|..+ ..+|++ -.++.+|-| |.|.|-.... .-..+.++.+.|+.++
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~l 108 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVEL 108 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHH
Confidence 567888888876543 34333 233444 478888866 7888865542 1223678899999999
Q ss_pred HHHhC-----CCCCceEEEEeChhhHHHHHHHHhhcc---------ccceEEEeecCCC
Q 045862 72 IDLVA-----PNDEKMFVVGHDSGTYMACFLCLFRAN---------RIKALVNLSVVFN 116 (271)
Q Consensus 72 l~~l~-----~~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lvl~~~~~~ 116 (271)
++.+= ..+.|++|+-.|+||-+|..++...-+ .+.+++|-++-..
T Consensus 109 lk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 109 LKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred HHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 98751 112589999999999999988875432 2455666554433
No 233
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.68 E-value=0.47 Score=41.26 Aligned_cols=59 Identities=19% Similarity=0.264 Sum_probs=37.3
Q ss_pred hHHhHHHHHHHHHHHhCCC-CCceEEEEeChhhHHHHHHHHh-----hcc------ccceEEEeecCCCCC
Q 045862 60 TCFHVIGDLIGLIDLVAPN-DEKMFVVGHDSGTYMACFLCLF-----RAN------RIKALVNLSVVFNPN 118 (271)
Q Consensus 60 ~~~~~~~~l~~~l~~l~~~-~~~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~~~~ 118 (271)
++..-...+...+.+.++. +.+++.|||||||.++=.+... .|+ ...++|+++.+...+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 3334444444445555553 3689999999999877655432 232 357788888776553
No 234
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=91.57 E-value=0.18 Score=43.38 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=29.5
Q ss_pred CCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 211 LLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 211 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+. .++.+.+|||+++.++|+...++|..|+...
T Consensus 427 ~l-~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 427 GF-SFVQVYNAGHMVPMDQPAVALTMINRFLRNR 459 (462)
T ss_pred Ce-EEEEECCCCccChhhHHHHHHHHHHHHHcCC
Confidence 45 7888999999999999999999999999753
No 235
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=91.40 E-value=0.15 Score=43.26 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=26.9
Q ss_pred CCCceEEEeCCCCccccccChHHHHHHHHHHHh
Q 045862 210 PLLEEITIMEGVGHFINQEKGHQLETEIGTSRG 242 (271)
Q Consensus 210 ~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 242 (271)
.+. .++.+.+|||+++.++|+...++|..||.
T Consensus 383 ~~l-tf~~V~~AGHmvP~dqP~~a~~m~~~fl~ 414 (415)
T PF00450_consen 383 GNL-TFVTVRGAGHMVPQDQPEAALQMFRRFLK 414 (415)
T ss_dssp TTE-EEEEETT--SSHHHHSHHHHHHHHHHHHC
T ss_pred ccE-EEEEEcCCcccChhhCHHHHHHHHHHHhc
Confidence 344 78999999999999999999999999986
No 236
>PRK12467 peptide synthase; Provisional
Probab=90.81 E-value=2 Score=47.35 Aligned_cols=98 Identities=8% Similarity=-0.034 Sum_probs=69.5
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
+.+++.|...++...+..+...|... ..++.+..++.-.-.. ...+++.++......+...... .+..+.|+|+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~-~p~~l~g~s~ 3766 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAK-GPYGLLGWSL 3766 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccC-CCeeeeeeec
Confidence 46999999999988888888888764 7888888776532221 2345666666666666554432 6899999999
Q ss_pred hhHHHHHHHHhh---ccccceEEEeec
Q 045862 90 GTYMACFLCLFR---ANRIKALVNLSV 113 (271)
Q Consensus 90 Gg~ia~~~a~~~---p~~v~~lvl~~~ 113 (271)
||.++..++... .+.+.-+.+++.
T Consensus 3767 g~~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3767 GGTLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred chHHHHHHHHHHHHcCCceeEEEEEec
Confidence 999999888763 344555555543
No 237
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.56 E-value=1.3 Score=37.87 Aligned_cols=41 Identities=12% Similarity=0.073 Sum_probs=32.2
Q ss_pred hCCCCCceEEEEeChhhHHHHHHHHhh-----ccccceEEEeecCCCC
Q 045862 75 VAPNDEKMFVVGHDSGTYMACFLCLFR-----ANRIKALVNLSVVFNP 117 (271)
Q Consensus 75 l~~~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~ 117 (271)
+|. +|+.|||+|+|+.+........ -..|..++++++|...
T Consensus 444 qG~--RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGN--RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCC--CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 466 8999999999999988655532 2468999999988754
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.53 E-value=1.1 Score=35.31 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=20.5
Q ss_pred CceEEEEeChhhHHHHHHHHhhc
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.++.|-|||+||.+|..+..++.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred ceEEEeccccchHHHHHhccccC
Confidence 68999999999999999888763
No 239
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.53 E-value=1.1 Score=35.31 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=20.5
Q ss_pred CceEEEEeChhhHHHHHHHHhhc
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.++.|-|||+||.+|..+..++.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred ceEEEeccccchHHHHHhccccC
Confidence 68999999999999999888763
No 240
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=87.75 E-value=11 Score=31.80 Aligned_cols=100 Identities=8% Similarity=-0.016 Sum_probs=67.9
Q ss_pred ceEEEEeccCCC-ccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc---------------------cCcchHHhHHHH
Q 045862 10 PEILFLYVFPEL-RYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE---------------------MTSYTCFHVIGD 67 (271)
Q Consensus 10 ~~vlllHG~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---------------------~~~~~~~~~~~~ 67 (271)
|+|++| |-..+ ...+..+-+.+.+.|.+|+.+|.-=.|.+....+ .....++.+++-
T Consensus 2 ~tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 2 KTIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred CEEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 455555 44444 4557778888888899999999765554433210 011234555566
Q ss_pred HHHHHHHh----CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEee
Q 045862 68 LIGLIDLV----APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLS 112 (271)
Q Consensus 68 l~~~l~~l----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 112 (271)
+..++..+ .+ .-++-+|-|.|..++..+....|=-+.++++..
T Consensus 81 a~~~v~~l~~~g~i--~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 81 AARFVSDLYDEGKI--DGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHHHHHHhcCCc--cEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 66666554 24 457889999999999999999998888887655
No 241
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=87.04 E-value=4.1 Score=30.82 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=44.6
Q ss_pred HHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh----hhHHHHHHHHhhc
Q 045862 31 ALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS----GTYMACFLCLFRA 102 (271)
Q Consensus 31 ~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~----Gg~ia~~~a~~~p 102 (271)
.+...|. +|+..|.++. ..|+.+.+++.+.++++..+. .++|+|+|. |..++-.+|.+..
T Consensus 71 ~l~~~G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~p---~lVL~~~t~~~~~grdlaprlAarLg 135 (202)
T cd01714 71 EALAMGADRAILVSDRAF---------AGADTLATAKALAAAIKKIGV---DLILTGKQSIDGDTGQVGPLLAELLG 135 (202)
T ss_pred HHHHcCCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhCC---CEEEEcCCcccCCcCcHHHHHHHHhC
Confidence 3333344 6777766543 357788899999999988764 689999999 8889988888753
No 242
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=86.21 E-value=1.8 Score=37.81 Aligned_cols=101 Identities=14% Similarity=-0.035 Sum_probs=59.2
Q ss_pred eEEEEeccCC---CccchHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHH---HHHhCCCCCceE
Q 045862 11 EILFLYVFPE---LRYSWCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGL---IDLVAPNDEKMF 83 (271)
Q Consensus 11 ~vlllHG~~~---~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~---l~~l~~~~~~~~ 83 (271)
.|+-+||.|. ++..-....+.++. .|..|+.+|+.=--+... ..-+++.--...-+ ...+|.++++++
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPF-----PRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPF-----PRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCC-----CcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 4777888873 45555555554544 378999999754333322 22333333222222 345676668999
Q ss_pred EEEeChhhHHHHHHHHhh---ccc-cceEEEeecCCC
Q 045862 84 VVGHDSGTYMACFLCLFR---ANR-IKALVNLSVVFN 116 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~---p~~-v~~lvl~~~~~~ 116 (271)
++|-|.||.+.+-+|.+. .-| -+++++.=++..
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 999999997665555442 223 366776655443
No 243
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.18 E-value=7.7 Score=28.00 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=51.9
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCe-EEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYR-AVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
.||..-||+..+....+++ |-+ ++. ++++|+..... ++++ .+. +.+.||++||
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpe-N~dl~lcYDY~dl~l--------dfDf-----------sAy----~hirlvAwSM 66 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPE-NHDLLLCYDYQDLNL--------DFDF-----------SAY----RHIRLVAWSM 66 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCC-CCcEEEEeehhhcCc--------ccch-----------hhh----hhhhhhhhhH
Confidence 6777888888888777655 233 354 56788763321 1111 112 3467899999
Q ss_pred hhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 90 GTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 90 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
|-++|-.+..-. ++++.+.+++...+
T Consensus 67 GVwvAeR~lqg~--~lksatAiNGTgLp 92 (214)
T COG2830 67 GVWVAERVLQGI--RLKSATAINGTGLP 92 (214)
T ss_pred HHHHHHHHHhhc--cccceeeecCCCCC
Confidence 999998888765 46777777766555
No 244
>PRK02399 hypothetical protein; Provisional
Probab=85.24 E-value=20 Score=30.21 Aligned_cols=101 Identities=11% Similarity=0.038 Sum_probs=65.7
Q ss_pred ceEEEEeccCCCc-cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCc---------------------ccCcchHHhHHHH
Q 045862 10 PEILFLYVFPELR-YSWCHQTIALASLSYRAVAPDLSGFGDTDELL---------------------EMTSYTCFHVIGD 67 (271)
Q Consensus 10 ~~vlllHG~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~~~~ 67 (271)
++|+++ |-..+. ..+..+-+.+.++|.+|+.+|.-..|....+. ......++.+++-
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~g 82 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEG 82 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHH
Confidence 455555 555544 45667777777779999999985444221110 0012233555566
Q ss_pred HHHHHHHh----CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeec
Q 045862 68 LIGLIDLV----APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 68 l~~~l~~l----~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
...++..| .+ .-++-+|-|.|..++..+....|=-+.++++..-
T Consensus 83 a~~~v~~L~~~g~i--~gviglGGs~GT~lat~aMr~LPiG~PKlmVSTm 130 (406)
T PRK02399 83 AAAFVRELYERGDV--AGVIGLGGSGGTALATPAMRALPIGVPKLMVSTM 130 (406)
T ss_pred HHHHHHHHHhcCCc--cEEEEecCcchHHHHHHHHHhCCCCCCeEEEEcc
Confidence 66666543 34 5578899999999999999999988888877653
No 245
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=83.73 E-value=0.96 Score=39.51 Aligned_cols=105 Identities=16% Similarity=0.077 Sum_probs=66.1
Q ss_pred CceEEEEeccCCCc--cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCc------ccCcchHHhHHHHHHHHHHHhCCC-C
Q 045862 9 GPEILFLYVFPELR--YSWCHQTIALASLSYRAVAPDLSGFGDTDELL------EMTSYTCFHVIGDLIGLIDLVAPN-D 79 (271)
Q Consensus 9 ~~~vlllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~~l~~~l~~l~~~-~ 79 (271)
.|++|+--|.-.-+ -.|......+-++|.-.+.-++||-|+=.+.- ......+++++.-.+.+++. +++ -
T Consensus 421 ~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitsp 499 (648)
T COG1505 421 NPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSP 499 (648)
T ss_pred CceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCH
Confidence 46665554443222 23555556666668888999999988664322 11223444554444444443 221 1
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
+++-+-|-|=||.+.-....++|+.+.++|+--|.
T Consensus 500 e~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 500 EKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred HHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 46889999999999888889999988877755543
No 246
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=83.57 E-value=2.6 Score=36.50 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=56.4
Q ss_pred HHHHHhhCCCeEEeeCCCCCCCCCC--Cccc--Cc--------chHHhHHHHHHHHHHHh-CCCCCceEEEEeChhhHHH
Q 045862 28 QTIALASLSYRAVAPDLSGFGDTDE--LLEM--TS--------YTCFHVIGDLIGLIDLV-APNDEKMFVVGHDSGTYMA 94 (271)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~--~~~~--~~--------~~~~~~~~~l~~~l~~l-~~~~~~~~lvGhS~Gg~ia 94 (271)
+...++. ||-++.=|- ||..+.. ...+ .. .++.+.+.--.++++.+ +..-+.-...|.|-||.-+
T Consensus 52 ~~~~~~~-G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 52 MATALAR-GYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQG 129 (474)
T ss_pred cchhhhc-CeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchH
Confidence 3445555 899999885 5554432 1111 11 12333333344445443 3311567899999999999
Q ss_pred HHHHHhhccccceEEEeecCCCC
Q 045862 95 CFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 95 ~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+..|.+||+.+.+++.-+|....
T Consensus 130 l~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHHhChhhcCeEEeCCchHHH
Confidence 99999999999999998876543
No 247
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=80.95 E-value=2.2 Score=34.87 Aligned_cols=31 Identities=6% Similarity=0.043 Sum_probs=27.1
Q ss_pred CceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 212 LEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 212 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
. +++.+.+|||+++ .+|+...+++..|+...
T Consensus 287 l-tf~~V~~AGHmV~-~qP~~al~m~~~fi~~~ 317 (319)
T PLN02213 287 M-TFATIKAGGHTAE-YRPNETFIMFQRWISGQ 317 (319)
T ss_pred c-eEEEEcCCCCCCC-cCHHHHHHHHHHHHcCC
Confidence 5 8888899999997 59999999999999753
No 248
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=80.07 E-value=16 Score=24.72 Aligned_cols=75 Identities=12% Similarity=-0.039 Sum_probs=49.0
Q ss_pred eEEEEeccCCCccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 11 EILFLYVFPELRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
.||.-|| .-+......++.+... --.+.++++. ...+.+++.+.+.+.++.+... +.++++. .+
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~-~~vlil~-Dl 66 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEG-DGVLILT-DL 66 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTT-SEEEEEE-SS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCC-CcEEEEe-eC
Confidence 4788888 5566677777777664 2478888765 2457788999999999887641 4555555 44
Q ss_pred hhHHHHHHHHh
Q 045862 90 GTYMACFLCLF 100 (271)
Q Consensus 90 Gg~ia~~~a~~ 100 (271)
+|......+.+
T Consensus 67 ~ggsp~n~a~~ 77 (116)
T PF03610_consen 67 GGGSPFNEAAR 77 (116)
T ss_dssp TTSHHHHHHHH
T ss_pred CCCccchHHHH
Confidence 44444444444
No 249
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=80.04 E-value=1.7 Score=35.53 Aligned_cols=32 Identities=25% Similarity=0.227 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHh
Q 045862 67 DLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 67 ~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
.+..+++..|+ .+-.++|||+|=+.|+.+|..
T Consensus 73 al~~~l~~~Gi--~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 73 ALARLLRSWGI--KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHHTTH--CESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhhccccc--ccceeeccchhhHHHHHHCCc
Confidence 34566778899 899999999999888866643
No 250
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=79.29 E-value=2.1 Score=36.70 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=28.6
Q ss_pred eEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 214 EITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 214 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
.+..+.||||+++.++|+....++..||...
T Consensus 418 tf~tVrGaGH~VP~~~p~~al~m~~~fl~g~ 448 (454)
T KOG1282|consen 418 TFATVRGAGHMVPYDKPESALIMFQRFLNGQ 448 (454)
T ss_pred EEEEEeCCcccCCCCCcHHHHHHHHHHHcCC
Confidence 5688899999999999999999999999875
No 251
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=78.24 E-value=3 Score=33.58 Aligned_cols=30 Identities=27% Similarity=0.239 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHH
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~ 99 (271)
+..+++.+|+ .+-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi--~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGV--RPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCC--cccEEEecCHHHHHHHHHhC
Confidence 3455677889 89999999999998887664
No 252
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=78.12 E-value=19 Score=27.04 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=46.8
Q ss_pred HHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc--c
Q 045862 27 HQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN--R 104 (271)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~ 104 (271)
...+.+.+++++++.+|-+|... .-.+..+.+..+++.... ..++||=-+..+.-.+..+..+-+ .
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~--~~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNP--DEVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSS--SEEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCC--ccceEEEecccChHHHHHHHHHhhccc
Confidence 34455556679999999998642 234566677777777765 567766666666556555544433 4
Q ss_pred cceEEEee
Q 045862 105 IKALVNLS 112 (271)
Q Consensus 105 v~~lvl~~ 112 (271)
+.++|+.-
T Consensus 142 ~~~lIlTK 149 (196)
T PF00448_consen 142 IDGLILTK 149 (196)
T ss_dssp TCEEEEES
T ss_pred CceEEEEe
Confidence 78888754
No 253
>PRK10279 hypothetical protein; Provisional
Probab=76.44 E-value=4.1 Score=33.00 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
+.+.+++.++ ..-.++|-|+|+.++..+|+...
T Consensus 23 VL~aL~E~gi--~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGI--EIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCC--CcCEEEEEcHHHHHHHHHHcCCh
Confidence 3445566788 78899999999999999997643
No 254
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=76.34 E-value=4 Score=33.13 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=39.8
Q ss_pred cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 23 YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
.+|.++++.|... -..++++ |=|. .. -..--+...+++.++ ..-.++|-|+|+.++..+|+.+
T Consensus 2 ~d~~rl~r~l~~~-~~gLvL~--GGG~---------RG--~ahiGvL~aLee~gi--~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGN-SIALVLG--GGGA---------RG--CAHIGVIKALEEAGI--PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCC-CEEEEEC--ChHH---------HH--HHHHHHHHHHHHcCC--CCCEEEEECHHHHHHHHHHcCC
Confidence 4577788888765 2333333 2110 01 122234455566688 7778999999999999999864
No 255
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=76.00 E-value=48 Score=28.18 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=43.3
Q ss_pred CceEEEEeccCC---CccchHHHHHHHhhCCCeEEeeCCCCC---CCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCce
Q 045862 9 GPEILFLYVFPE---LRYSWCHQTIALASLSYRAVAPDLSGF---GDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKM 82 (271)
Q Consensus 9 ~~~vlllHG~~~---~~~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 82 (271)
+.|+|+++.+.. ........+..|.+.|+.|+-++ +|+ |..... ...+.++.+..+...+....+.+.++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~g---r~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPG---RMAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCC---CCCCHHHHHHHHHHHhhhcccCCCEE
Confidence 457788875532 22335677788888898888665 343 322221 23456777777776664433322456
Q ss_pred EEEEe
Q 045862 83 FVVGH 87 (271)
Q Consensus 83 ~lvGh 87 (271)
.+-|-
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 66665
No 256
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=75.86 E-value=3.9 Score=32.93 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHHh
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
+..+++..++ .+..++|||+|=..|+.++..
T Consensus 66 l~~~l~~~g~--~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLP--RPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCC--CCcEEeecCHHHHHHHHHhCC
Confidence 4455667788 899999999999888877643
No 257
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=75.71 E-value=4.7 Score=29.49 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=25.2
Q ss_pred HHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 69 IGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 69 ~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.+.+.+.++ ..-.+.|-|.|+.++..++...+
T Consensus 17 l~aL~e~gi--~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 17 AKALRERGP--LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHcCC--CCCEEEEECHHHHHHHHHHcCCC
Confidence 344445577 77889999999999999998654
No 258
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=75.70 E-value=16 Score=25.31 Aligned_cols=56 Identities=9% Similarity=-0.008 Sum_probs=34.3
Q ss_pred CCceEEEEeccCCCccchH--HHHHHHhhCCCe---EE----eeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH
Q 045862 8 QGPEILFLYVFPELRYSWC--HQTIALASLSYR---AV----APDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL 74 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~--~~~~~l~~~g~~---vi----~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~ 74 (271)
++|-|+-+||+.|++..|- -+++.|-..|-+ |. ..|+| ..-.++++-++|..+|..
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP-----------~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP-----------HNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC-----------CchHHHHHHHHHHHHHHH
Confidence 4678899999999999884 445665443321 22 22332 234566677777766653
No 259
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=75.09 E-value=19 Score=26.62 Aligned_cols=60 Identities=13% Similarity=0.069 Sum_probs=39.8
Q ss_pred CCCceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCC--CCCCCCCCCcccCcchHHhHHHHHHH
Q 045862 7 GQGPEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDL--SGFGDTDELLEMTSYTCFHVIGDLIG 70 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~~l~~ 70 (271)
++.+.+|++-|+.++..+ =..+.+.|.+.|++++..|= --||.+.. ..++-++-.+.+..
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d----LgFs~edR~eniRR 83 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD----LGFSREDRIENIRR 83 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC----CCCChHHHHHHHHH
Confidence 346789999999987765 34566788888999999993 22444432 23555555554443
No 260
>PLN02209 serine carboxypeptidase
Probab=73.60 E-value=4.3 Score=34.81 Aligned_cols=30 Identities=10% Similarity=0.060 Sum_probs=26.7
Q ss_pred CceEEEeCCCCccccccChHHHHHHHHHHHhh
Q 045862 212 LEEITIMEGVGHFINQEKGHQLETEIGTSRGE 243 (271)
Q Consensus 212 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 243 (271)
. +++.+.+|||+++ .+|++..+++..|+..
T Consensus 405 L-tfv~V~~AGHmVp-~qP~~al~m~~~fi~~ 434 (437)
T PLN02209 405 M-TFATVKGGGHTAE-YLPEESSIMFQRWISG 434 (437)
T ss_pred e-EEEEEcCCCCCcC-cCHHHHHHHHHHHHcC
Confidence 5 7888999999996 5999999999999965
No 261
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=73.15 E-value=4.9 Score=32.64 Aligned_cols=32 Identities=9% Similarity=0.148 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
+.+.|++.++ .+-.+.|-|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi--~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGI--PIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCC--CccEEEecCHHHHHHHHHHcCC
Confidence 4555677788 8899999999999999999864
No 262
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=73.14 E-value=3.4 Score=30.84 Aligned_cols=50 Identities=16% Similarity=0.217 Sum_probs=35.3
Q ss_pred CCCcchhc-------hhHHhhhcCCC-ceEEEeCCCCccccccCh---HHHHHHHHHHHhh
Q 045862 194 CGVKEYIH-------KGEFRRDVPLL-EEITIMEGVGHFINQEKG---HQLETEIGTSRGE 243 (271)
Q Consensus 194 ~G~~D~~~-------~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 243 (271)
.|+.|.++ +..+...+|.. +...+.+|+||+-.+.-+ +++.-.|.+|+.+
T Consensus 141 EGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 141 EGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 69999885 34555555543 356778899998776533 6777888888865
No 263
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=73.01 E-value=5.8 Score=31.55 Aligned_cols=32 Identities=6% Similarity=0.107 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
+...+++.++ ..-.++|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi--~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGI--PIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCC--CccEEEEECHHHHHHHHHHcCC
Confidence 4445566788 6778999999999999999863
No 264
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=72.93 E-value=5.7 Score=29.62 Aligned_cols=31 Identities=23% Similarity=0.206 Sum_probs=24.1
Q ss_pred HHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 70 GLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 70 ~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
..+++.++ ..-.++|-|.||.+|..++..+.
T Consensus 19 ~~L~e~~~--~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 19 KALEEAGI--LKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHcCC--CcceEEEECHHHHHHHHHHcCCC
Confidence 33445577 67889999999999999998543
No 265
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=72.44 E-value=12 Score=26.82 Aligned_cols=58 Identities=19% Similarity=0.129 Sum_probs=39.4
Q ss_pred HHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHH
Q 045862 28 QTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~ 99 (271)
+.+.+.+ |-.|++.|.+| ..++-+++|+.+..+-+ .|- +=.++||-|.|=.=++...+
T Consensus 60 il~~i~~-~~~vi~Ld~~G----------k~~sSe~fA~~l~~~~~-~G~--~i~f~IGG~~Gl~~~~~~~a 117 (155)
T COG1576 60 ILAAIPK-GSYVVLLDIRG----------KALSSEEFADFLERLRD-DGR--DISFLIGGADGLSEAVKARA 117 (155)
T ss_pred HHHhcCC-CCeEEEEecCC----------CcCChHHHHHHHHHHHh-cCC--eEEEEEeCcccCCHHHHHHH
Confidence 3444555 57999999997 34666778877776544 343 45788999999766655433
No 266
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=72.42 E-value=48 Score=27.77 Aligned_cols=86 Identities=12% Similarity=0.006 Sum_probs=60.5
Q ss_pred ceEEEEeccCC-------CccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCce
Q 045862 10 PEILFLYVFPE-------LRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKM 82 (271)
Q Consensus 10 ~~vlllHG~~~-------~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~ 82 (271)
..||++||=+- +.+.|..+++.+.++| -+-.+|.--.|.-+. +++-+..++.++.. .+-
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~G--------leeDa~~lR~~a~~-----~~~ 237 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFADG--------LEEDAYALRLFAEV-----GPE 237 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhccc--------hHHHHHHHHHHHHh-----CCc
Confidence 36999998643 4567999999999984 677788776664432 44555555555543 233
Q ss_pred EEEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 83 FVVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 83 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
.+|..|+.=..++ |.+||-++.+++..
T Consensus 238 ~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 238 LLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred EEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 7888898776664 78999999998753
No 267
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=72.19 E-value=5 Score=32.09 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=23.6
Q ss_pred HHHHHHHhC-CCCCceEEEEeChhhHHHHHHHHh
Q 045862 68 LIGLIDLVA-PNDEKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 68 l~~~l~~l~-~~~~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
+..+++..+ + .+..++|||+|=+.|+.++..
T Consensus 72 l~~~l~~~g~i--~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 72 LYLKLKEQGGL--KPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHHcCCC--CCCEEeecCHHHHHHHHHhCC
Confidence 334455666 8 899999999999988877654
No 268
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=71.01 E-value=10 Score=33.41 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=61.4
Q ss_pred CceEEEEeccCCCccchHHHHHH------Hh--hCCCeEEeeCCCC----CC-CCCCCcccCcchHHhHHHHHHHHHHHh
Q 045862 9 GPEILFLYVFPELRYSWCHQTIA------LA--SLSYRAVAPDLSG----FG-DTDELLEMTSYTCFHVIGDLIGLIDLV 75 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~------l~--~~g~~vi~~D~~G----~G-~S~~~~~~~~~~~~~~~~~l~~~l~~l 75 (271)
.-|+-+-=|.+-+......+.+. |+ .-|=+|..-.--| || .|....+........+...|.+++..
T Consensus 258 ~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e- 336 (655)
T COG3887 258 NIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE- 336 (655)
T ss_pred CcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh-
Confidence 34677777887766665544322 22 2245666654333 34 44333322233444555666666655
Q ss_pred CCCCCceEEEEe------ChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 76 APNDEKMFVVGH------DSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 76 ~~~~~~~~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
. ++|+++|| |.|+.+++..-+..-.+ .+.++++|.-
T Consensus 337 -~--d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 337 -S--DNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred -c--CcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 4 78999999 78999999877765555 7788888643
No 269
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=70.69 E-value=20 Score=27.32 Aligned_cols=38 Identities=21% Similarity=0.120 Sum_probs=27.8
Q ss_pred CCceEEEEeccCCCccc--h-HHHHHHHhhCCCeEEeeCCC
Q 045862 8 QGPEILFLYVFPELRYS--W-CHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~--~-~~~~~~l~~~g~~vi~~D~~ 45 (271)
.+++|.||+=.+.+... | ...-+.|++.|..+.-+++-
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 36799999988777664 3 45567788888888777763
No 270
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=69.85 E-value=6.1 Score=33.89 Aligned_cols=30 Identities=7% Similarity=0.014 Sum_probs=26.5
Q ss_pred eEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 214 EITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 214 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+++.+.+|||+++ .+|++..+++..|+...
T Consensus 402 tfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~ 431 (433)
T PLN03016 402 TFATIKAGGHTAE-YRPNETFIMFQRWISGQ 431 (433)
T ss_pred EEEEEcCCCCCCC-CCHHHHHHHHHHHHcCC
Confidence 7888999999997 59999999999999653
No 271
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=69.63 E-value=8.1 Score=29.71 Aligned_cols=29 Identities=10% Similarity=0.071 Sum_probs=23.1
Q ss_pred HHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 71 LIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 71 ~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
.+.+.++ +.-.++|-|.|+.+|..+|...
T Consensus 21 aL~e~gi--~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 21 ALLEMGL--EPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHcCC--CceEEEEeCHHHHHHHHHHcCC
Confidence 3444577 6778999999999999999754
No 272
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=68.90 E-value=36 Score=29.07 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=39.8
Q ss_pred HhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccc--cceEEEe
Q 045862 62 FHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANR--IKALVNL 111 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~ 111 (271)
+++.+.+.++-+.+.. ..+.+|--+|=|.-|...|..+.+. +.++|+.
T Consensus 198 e~Lm~El~~Ik~~~~P--~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVINP--DETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcCC--CeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 5677778888888888 8899999999999999999988775 6777774
No 273
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=68.12 E-value=8.5 Score=29.40 Aligned_cols=31 Identities=10% Similarity=0.051 Sum_probs=24.9
Q ss_pred HHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 70 GLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 70 ~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
..+.+.++ ..-.++|.|.|+.+|..+|...+
T Consensus 18 ~aL~e~g~--~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 18 KALAEAGI--EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHcCC--CCCEEEEECHHHHHHHHHHcCCc
Confidence 34455677 67789999999999999998764
No 274
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=67.93 E-value=84 Score=27.48 Aligned_cols=102 Identities=11% Similarity=0.043 Sum_probs=63.1
Q ss_pred CceEEEEeccCCC---ccchHHHHHHHhhCCCeEEeeCCCC----CCCCCCCcccCcchHHhHHHHHHHHHHH-----h-
Q 045862 9 GPEILFLYVFPEL---RYSWCHQTIALASLSYRAVAPDLSG----FGDTDELLEMTSYTCFHVIGDLIGLIDL-----V- 75 (271)
Q Consensus 9 ~~~vlllHG~~~~---~~~~~~~~~~l~~~g~~vi~~D~~G----~G~S~~~~~~~~~~~~~~~~~l~~~l~~-----l- 75 (271)
+.+||+++.+... .......+..|.+.|+.|+-++. | +|...... -...++.+..+..++.. |
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~Gr---m~e~~~I~~~v~~~~~~~~~~~l~ 255 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAGVGR---MAEPLEIAAAAEALLRPPQPKPLA 255 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcCCCC---CCCHHHHHHHHHHHHhhccccccC
Confidence 4678888866544 34456778889998999987764 2 33332221 33456666666666632 2
Q ss_pred -------------CCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 76 -------------APNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 76 -------------~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
.+ ++|=.++.-..|.++..+|...-.+=..++++.++..
T Consensus 256 gkkvLITaGpT~E~I--DpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~ 307 (475)
T PRK13982 256 GRRVLITAGPTHEPI--DPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD 307 (475)
T ss_pred CCEEEEecCCccccC--CcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC
Confidence 12 4566777666666666666655445567788876543
No 275
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=67.41 E-value=59 Score=27.58 Aligned_cols=75 Identities=11% Similarity=0.049 Sum_probs=42.2
Q ss_pred ceEEEEeccCC---CccchHHHHHHHhhCCCeEEeeCCCCC--CCCCCCcccCcchHHhHHHHHHHHHHH-hCCCCCceE
Q 045862 10 PEILFLYVFPE---LRYSWCHQTIALASLSYRAVAPDLSGF--GDTDELLEMTSYTCFHVIGDLIGLIDL-VAPNDEKMF 83 (271)
Q Consensus 10 ~~vlllHG~~~---~~~~~~~~~~~l~~~g~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~ 83 (271)
.++|+++-+.. ........+..|.+.|+.|+-+..--+ |+.... ...+.++.++.+...+.. -.+.+.++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g---~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKG---RLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCC---CCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 46777776433 233456778888888877766653222 333221 244667777777776644 112224555
Q ss_pred EEEe
Q 045862 84 VVGH 87 (271)
Q Consensus 84 lvGh 87 (271)
+-|-
T Consensus 190 it~g 193 (390)
T TIGR00521 190 ITAG 193 (390)
T ss_pred EecC
Confidence 5554
No 276
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=67.01 E-value=8.8 Score=28.16 Aligned_cols=30 Identities=10% Similarity=0.120 Sum_probs=23.6
Q ss_pred HHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 71 LIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 71 ~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.+++.++ ..-.++|-|.|+.+|..++..+.
T Consensus 21 ~L~e~g~--~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGI--EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCC--CeeEEEEeCHHHHHHHHHHcCCC
Confidence 3345577 66789999999999999988654
No 277
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=65.49 E-value=67 Score=25.48 Aligned_cols=73 Identities=14% Similarity=0.059 Sum_probs=45.6
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCC-eEEeeCCCCCCCCCC-CcccCcchHHhHHHHHHHHHHHhCCCCCceEE-
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSY-RAVAPDLSGFGDTDE-LLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFV- 84 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~l- 84 (271)
.+.||++=-|...+.+.|...++.+...|- +++.... | -|.. +......++.. +..+-+..+. ++.+
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~r-G--~s~y~~~~~~~~dl~~----i~~lk~~~~~---pV~~d 200 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCER-G--IRTFEKATRNTLDLSA----VPVLKKETHL---PIIVD 200 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEEC-C--CCCCCCCCcCCcCHHH----HHHHHHhhCC---CEEEc
Confidence 477999999999999999999999988765 4555443 3 3322 21111222222 1222233454 6778
Q ss_pred EEeChh
Q 045862 85 VGHDSG 90 (271)
Q Consensus 85 vGhS~G 90 (271)
.+||.|
T Consensus 201 s~Hs~G 206 (260)
T TIGR01361 201 PSHAAG 206 (260)
T ss_pred CCCCCC
Confidence 799988
No 278
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=65.47 E-value=5 Score=34.22 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=27.1
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcccc
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRI 105 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 105 (271)
+...+...++ .+-++.|-|.|+.+|..+|...++.+
T Consensus 91 VLkaL~E~gl--~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 91 VLKALFEANL--LPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHHcCC--CCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 3344445567 67789999999999999998766543
No 279
>PRK14974 cell division protein FtsY; Provisional
Probab=63.70 E-value=62 Score=26.80 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=45.5
Q ss_pred hhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc--ccceEEE
Q 045862 33 ASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN--RIKALVN 110 (271)
Q Consensus 33 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 110 (271)
...|++++.+|-.|.... -..+.+.+..+.+.... ..+++|.-+.-|.-++..+..+.+ .+.++|+
T Consensus 219 ~~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~p--d~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKP--DLVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred HhCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCC--ceEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 345799999999976532 23455666666666666 667788877777777766665532 5677777
Q ss_pred ee
Q 045862 111 LS 112 (271)
Q Consensus 111 ~~ 112 (271)
.-
T Consensus 287 TK 288 (336)
T PRK14974 287 TK 288 (336)
T ss_pred ee
Confidence 54
No 280
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=63.60 E-value=32 Score=25.93 Aligned_cols=63 Identities=13% Similarity=-0.027 Sum_probs=36.0
Q ss_pred CCceEEEEeccCCCccc---hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH
Q 045862 8 QGPEILFLYVFPELRYS---WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL 74 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~---~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~ 74 (271)
..+|++++||.....-. =..+...|.+.|..+...-+|+.|..-.. .....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~----~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN----PENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS----HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC----chhHHHHHHHHHHHHHH
Confidence 35899999998754332 34566777777766555555554432111 12233556666666654
No 281
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=63.15 E-value=20 Score=27.72 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=28.8
Q ss_pred hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 25 WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
.+++...|.++||+|..+.+.- ..+...+.+.|..+++..+. +.++++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~-----------~~~~~s~~~~L~~~~~~~~~--~~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDD-----------PENTQSFEDALARALKQHGI--DRLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT------------TT--SSHHHHHHHHHHHH------EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCC-----------ccccccHHHHHHHHHHHcCC--CEEEEE
Confidence 4667888989999999999862 22333577788888888888 676664
No 282
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=63.00 E-value=46 Score=22.69 Aligned_cols=71 Identities=7% Similarity=-0.027 Sum_probs=45.7
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChh
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSG 90 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~G 90 (271)
.||.-|| .-+......++.+....-++.++++. ...+.+++.+.+.++++..... +.++++-==+|
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~-~~viil~Dl~G 68 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP-----------PGESPDDLLEKIKAALAELDSG-EGVLILTDLFG 68 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC-----------CCCCHHHHHHHHHHHHHHhCCC-CcEEEEEeCCC
Confidence 4778888 45555666666665432477788765 2356778888888888887541 45555554447
Q ss_pred hHHHH
Q 045862 91 TYMAC 95 (271)
Q Consensus 91 g~ia~ 95 (271)
|....
T Consensus 69 GSp~n 73 (122)
T cd00006 69 GSPNN 73 (122)
T ss_pred CCHHH
Confidence 75543
No 283
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=62.86 E-value=9.8 Score=33.57 Aligned_cols=32 Identities=22% Similarity=0.126 Sum_probs=25.7
Q ss_pred HHHHH-HHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 68 LIGLI-DLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 68 l~~~l-~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
+..++ +..|+ ++-.++|||+|=..|+.+|.-.
T Consensus 254 La~ll~~~~GI--~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAI--KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCC--CCCEEeecCHHHHHHHHHhCCC
Confidence 44555 57889 8999999999999998887654
No 284
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=62.85 E-value=46 Score=28.60 Aligned_cols=69 Identities=10% Similarity=0.109 Sum_probs=44.6
Q ss_pred HHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc--ccceE
Q 045862 31 ALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN--RIKAL 108 (271)
Q Consensus 31 ~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~l 108 (271)
.+.+.+|+++.+|-+|.-.. -+.+.+.+..+.+.... ..++||--++-|.-+...|..+.+ .+.++
T Consensus 177 ~~~~~~~DvViIDTaGr~~~----------d~~lm~El~~i~~~~~p--~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHKQ----------EDSLFEEMLQVAEAIQP--DNIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHhCCCCEEEEECCCCCcc----------hHHHHHHHHHHhhhcCC--cEEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 34444799999999984321 22355556666666555 667888878777777777766643 36777
Q ss_pred EEe
Q 045862 109 VNL 111 (271)
Q Consensus 109 vl~ 111 (271)
|+.
T Consensus 245 IlT 247 (429)
T TIGR01425 245 IIT 247 (429)
T ss_pred EEE
Confidence 764
No 285
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=62.64 E-value=75 Score=25.05 Aligned_cols=40 Identities=13% Similarity=-0.037 Sum_probs=31.5
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCC
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGF 47 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 47 (271)
.+.||++=-|...+.+.|...++.+.+.|-.=+++-.||.
T Consensus 121 tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 121 IDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 4789999999999999999999999987764344444554
No 286
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=61.59 E-value=25 Score=27.31 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=26.6
Q ss_pred CCceEEEEeccCCC--ccch-HHHHHHHhhCCCeEEeeCCC
Q 045862 8 QGPEILFLYVFPEL--RYSW-CHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 8 ~~~~vlllHG~~~~--~~~~-~~~~~~l~~~g~~vi~~D~~ 45 (271)
.+|.|+||+=.... ...| ..+...|.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 46899999876633 3333 34556677779998888876
No 287
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=60.90 E-value=5.8 Score=33.66 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=28.1
Q ss_pred HHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceE
Q 045862 69 IGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKAL 108 (271)
Q Consensus 69 ~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 108 (271)
...+...++ .+-+++|-|.|+.+|..+|...++.+..+
T Consensus 86 lkaL~e~gl--lp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 86 VKALLDADL--LPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHhCCC--CCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333444567 67789999999999999999766555444
No 288
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=60.28 E-value=16 Score=26.65 Aligned_cols=29 Identities=10% Similarity=0.101 Sum_probs=22.5
Q ss_pred HHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 71 LIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 71 ~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
.++..++ ..-.++|-|.|+.+|..++...
T Consensus 21 ~L~~~~~--~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 21 ALEEAGI--PIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHcCC--CeeEEEEECHHHHHHHHHHcCC
Confidence 3344566 6678999999999999998754
No 289
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=60.20 E-value=6.2 Score=33.18 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccc
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIK 106 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 106 (271)
+...+...++ .+-++.|-|.|+.+|..+|...++.+.
T Consensus 101 v~kaL~e~gl--~p~~i~GtS~Gaivaa~~a~~~~~e~~ 137 (391)
T cd07229 101 VVKALWLRGL--LPRIITGTATGALIAALVGVHTDEELL 137 (391)
T ss_pred HHHHHHHcCC--CCceEEEecHHHHHHHHHHcCCHHHHH
Confidence 3344555677 677899999999999999996554433
No 290
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=59.28 E-value=29 Score=27.82 Aligned_cols=50 Identities=6% Similarity=-0.025 Sum_probs=31.5
Q ss_pred HhHHHHHHHHHHHhCCCCCc-eEEEEeChhhHHHHHHHHhhccccceEEEee
Q 045862 62 FHVIGDLIGLIDLVAPNDEK-MFVVGHDSGTYMACFLCLFRANRIKALVNLS 112 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 112 (271)
+....-+..+++.+++..+. +.=||..||++. +.+|.++..+|-++.+..
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCCH
Confidence 34456677777888874233 444998888864 456666655665555443
No 291
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=59.10 E-value=92 Score=24.93 Aligned_cols=91 Identities=14% Similarity=0.112 Sum_probs=48.0
Q ss_pred ceEEEEeccCCCccc------hHHHHHHH-hhCCCeEEeeCCCCCCCC--------CCCc-----ccCcchHHhHHH-HH
Q 045862 10 PEILFLYVFPELRYS------WCHQTIAL-ASLSYRAVAPDLSGFGDT--------DELL-----EMTSYTCFHVIG-DL 68 (271)
Q Consensus 10 ~~vlllHG~~~~~~~------~~~~~~~l-~~~g~~vi~~D~~G~G~S--------~~~~-----~~~~~~~~~~~~-~l 68 (271)
..|||+=|.+.+... -..+.+.+ ...+-+.+++=.+|-|.. .... ......++.-+. ..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 356777777654332 23444455 222223444445666651 1110 001123333333 33
Q ss_pred HHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 69 IGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 69 ~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
..+++..... +.+.++|.|-|+.+|-.+|..-
T Consensus 82 ~~l~~~~~~g-d~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPG-DRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCc-ceEEEEecCccHHHHHHHHHHH
Confidence 3444555432 6789999999999999988653
No 292
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=58.77 E-value=16 Score=28.87 Aligned_cols=31 Identities=13% Similarity=-0.025 Sum_probs=23.6
Q ss_pred HHHHhCCCCC-ceEEEEeChhhHHHHHHHHhhcc
Q 045862 71 LIDLVAPNDE-KMFVVGHDSGTYMACFLCLFRAN 103 (271)
Q Consensus 71 ~l~~l~~~~~-~~~lvGhS~Gg~ia~~~a~~~p~ 103 (271)
.+.+.++ . .-.++|-|.|+.+|..+++....
T Consensus 19 al~e~~~--~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 19 AFLEAGI--RPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHcCC--CCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3444566 5 45899999999999999987654
No 293
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=58.27 E-value=60 Score=24.61 Aligned_cols=27 Identities=19% Similarity=-0.057 Sum_probs=21.8
Q ss_pred CCCccchHHHHHHHhhCCCeEEeeCCC
Q 045862 19 PELRYSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 19 ~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
++++..-+.+...|++.|++|++.|+.
T Consensus 21 Gg~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 21 GGSSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred cCCchHHHHHHHHHHhcCcEEEEeecc
Confidence 345556778889999999999999874
No 294
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=58.26 E-value=42 Score=24.92 Aligned_cols=61 Identities=10% Similarity=0.035 Sum_probs=37.1
Q ss_pred CCceEEEEeccC---CCccchHHHHHHHhhCCCeEEeeCCCCC---CCCCCCcccCcchHHhHHHHHHHHH
Q 045862 8 QGPEILFLYVFP---ELRYSWCHQTIALASLSYRAVAPDLSGF---GDTDELLEMTSYTCFHVIGDLIGLI 72 (271)
Q Consensus 8 ~~~~vlllHG~~---~~~~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~~l~~~l 72 (271)
.+.+||+.+-+. .........+..|++.|+.|+-+. +|+ |..... ...++++.++.+...+
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g---~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG---ALADIETILETIENTL 178 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC---CCCCHHHHHHHHHHHh
Confidence 356788887532 233445677888999898887777 444 433222 2345666666665544
No 295
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=58.22 E-value=52 Score=28.60 Aligned_cols=87 Identities=13% Similarity=0.038 Sum_probs=54.8
Q ss_pred EEeccCCCccchH-HHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhH
Q 045862 14 FLYVFPELRYSWC-HQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTY 92 (271)
Q Consensus 14 llHG~~~~~~~~~-~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ 92 (271)
|=-|++.+..... .-+.+-..+||.|+.+|-.|.-. +-+.+...+..+++.-.+ +.++.||.-+=|.
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~----------~~~~lm~~l~k~~~~~~p--d~i~~vgealvg~ 510 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH----------NNAPLMTSLAKLIKVNKP--DLILFVGEALVGN 510 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc----------CChhHHHHHHHHHhcCCC--ceEEEehhhhhCc
Confidence 4446666654433 33455566799999999887432 223455667777777666 7888888877776
Q ss_pred HHHHHHHhh---------ccccceEEEee
Q 045862 93 MACFLCLFR---------ANRIKALVNLS 112 (271)
Q Consensus 93 ia~~~a~~~---------p~~v~~lvl~~ 112 (271)
=++.-+..+ |..+.++++.-
T Consensus 511 dsv~q~~~fn~al~~~~~~r~id~~~ltk 539 (587)
T KOG0781|consen 511 DSVDQLKKFNRALADHSTPRLIDGILLTK 539 (587)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEEEe
Confidence 665444432 33466666644
No 296
>PHA02114 hypothetical protein
Probab=57.66 E-value=18 Score=23.50 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=26.7
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeC
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D 43 (271)
+||+=-.+..+..-|-.++..|.+.||+|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 677766777788889999999998899988754
No 297
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=57.49 E-value=20 Score=29.27 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=17.1
Q ss_pred eEEEEeChhhHHHHHHHHhh
Q 045862 82 MFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~~ 101 (271)
-.+.|-|+||.||..++..+
T Consensus 34 D~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 34 DWIAGTSTGGILALALLHGK 53 (312)
T ss_pred cEEEeeChHHHHHHHHHcCC
Confidence 36899999999999999754
No 298
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=57.49 E-value=77 Score=25.53 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=29.0
Q ss_pred HHHHHHhhCCCe--EEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHH
Q 045862 27 HQTIALASLSYR--AVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMA 94 (271)
Q Consensus 27 ~~~~~l~~~g~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia 94 (271)
..++.+.+.|.. =|.+|. |+|.+.... .++ ++...+..+ ..++. .+++|+|-=..+.
T Consensus 167 ~~i~~a~~~GI~~~~IilDP-GiGF~k~~~----~n~-~ll~~l~~l-~~lg~----Pilvg~SRKsfig 225 (282)
T PRK11613 167 EQIARCEAAGIAKEKLLLDP-GFGFGKNLS----HNY-QLLARLAEF-HHFNL----PLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHcCCChhhEEEeC-CCCcCCCHH----HHH-HHHHHHHHH-HhCCC----CEEEEecccHHHH
Confidence 334445566774 677885 666543222 122 122333332 33443 6899999444443
No 299
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=57.37 E-value=49 Score=26.39 Aligned_cols=64 Identities=9% Similarity=0.122 Sum_probs=40.8
Q ss_pred eEEEEeccCCCcc-chHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceE-EEEeC
Q 045862 11 EILFLYVFPELRY-SWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMF-VVGHD 88 (271)
Q Consensus 11 ~vlllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~-lvGhS 88 (271)
.++++ |.+|++. .-..++.++. ++.++-++.. ..|++.++-+|+..++...|+.+++++ ++-.+
T Consensus 33 h~LLv-G~~GsGr~sl~rLaa~i~--~~~~~~i~~~-----------~~y~~~~f~~dLk~~~~~ag~~~~~~vfll~d~ 98 (268)
T PF12780_consen 33 HALLV-GVGGSGRQSLARLAAFIC--GYEVFQIEIT-----------KGYSIKDFKEDLKKALQKAGIKGKPTVFLLTDS 98 (268)
T ss_dssp EEEEE-CTTTSCHHHHHHHHHHHT--TEEEE-TTTS-----------TTTHHHHHHHHHHHHHHHHHCS-S-EEEEEECC
T ss_pred CeEEe-cCCCccHHHHHHHHHHHh--ccceEEEEee-----------CCcCHHHHHHHHHHHHHHHhccCCCeEEEecCc
Confidence 44544 6666543 3556666655 4888888753 468999999999999988876434444 44544
No 300
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=56.59 E-value=10 Score=27.38 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=29.9
Q ss_pred eCCCCCCCCCCCc-ccCcchHHhHHHHH----HHHHHHhCCC--CCceEEEEeChhhH
Q 045862 42 PDLSGFGDTDELL-EMTSYTCFHVIGDL----IGLIDLVAPN--DEKMFVVGHDSGTY 92 (271)
Q Consensus 42 ~D~~G~G~S~~~~-~~~~~~~~~~~~~l----~~~l~~l~~~--~~~~~lvGhS~Gg~ 92 (271)
+-+-|||...... ....++.++++.-| ..+.+.++.. -+++.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 4455888762222 23577889999888 5555554321 05799999999887
No 301
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=56.39 E-value=9.6 Score=31.02 Aligned_cols=31 Identities=6% Similarity=0.079 Sum_probs=23.7
Q ss_pred HHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 69 IGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 69 ~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
...+...++ .+-++.|-|.|+.+|..++...
T Consensus 87 lkaL~e~gl--~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 87 VRTLVEHQL--LPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHcCC--CCCEEEEECHHHHHHHHHHcCC
Confidence 334444577 6778999999999999998754
No 302
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=56.34 E-value=21 Score=29.99 Aligned_cols=38 Identities=21% Similarity=0.058 Sum_probs=30.2
Q ss_pred EEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCC
Q 045862 12 ILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTD 51 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~ 51 (271)
|||+|+..- ..|+.+++.|.++|++|.++-..+.+...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 789987643 23889999999999999998888776544
No 303
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=56.29 E-value=18 Score=28.66 Aligned_cols=73 Identities=5% Similarity=-0.082 Sum_probs=48.8
Q ss_pred CCceEEEEeccCCCcc--chHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 8 QGPEILFLYVFPELRY--SWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
..|.||++.|+.+++. ..+.++..|..+|++|.++.-|-- -+..-.-+-.+-.++... +.+.|+
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt~-------------eE~~~p~lWRfw~~lP~~-G~i~IF 119 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPSA-------------EELDHDFLWRIHKALPER-GEIGIF 119 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH-------------HHHcCchHHHHHHhCCCC-CeEEEE
Confidence 3589999999987665 478899999999999999965521 111112233444555432 678888
Q ss_pred EeChhhHHH
Q 045862 86 GHDSGTYMA 94 (271)
Q Consensus 86 GhS~Gg~ia 94 (271)
=-||=+-+.
T Consensus 120 ~RSWY~~vl 128 (264)
T TIGR03709 120 NRSHYEDVL 128 (264)
T ss_pred cCccccchh
Confidence 778766554
No 304
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=55.29 E-value=0.65 Score=36.88 Aligned_cols=90 Identities=13% Similarity=-0.093 Sum_probs=53.2
Q ss_pred CceEEEEeccCCCccchHHHH-HHHhhCCCeEEeeCCCCCCCCCCCcccCcc--hHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 9 GPEILFLYVFPELRYSWCHQT-IALASLSYRAVAPDLSGFGDTDELLEMTSY--TCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~--~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
+..++..||...+......+. ..+...++.++..|+++++.+......... +.......+......+.. .+..+.
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 165 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDA--SRIVVW 165 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHh--hcccce
Confidence 456777888755554443333 344444689999999999998644421111 122222222222112223 578999
Q ss_pred EeChhhHHHHHHHHh
Q 045862 86 GHDSGTYMACFLCLF 100 (271)
Q Consensus 86 GhS~Gg~ia~~~a~~ 100 (271)
|.|+||..++.....
T Consensus 166 g~s~g~~~~~~~~~~ 180 (299)
T COG1073 166 GESLGGALALLLLGA 180 (299)
T ss_pred eeccCceeecccccc
Confidence 999999988876654
No 305
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=55.00 E-value=81 Score=25.70 Aligned_cols=92 Identities=14% Similarity=0.095 Sum_probs=52.5
Q ss_pred cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCccc-CcchHHhHH--HHHHHHHHHhCCCCCc------eEEEEeCh----
Q 045862 23 YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEM-TSYTCFHVI--GDLIGLIDLVAPNDEK------MFVVGHDS---- 89 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~--~~l~~~l~~l~~~~~~------~~lvGhS~---- 89 (271)
..=.+.+..|.+.||.|+++|-.-.|........ ..+-.-+.. +-+.+++++..+ +- ...||-|+
T Consensus 11 YIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~i--daViHFAa~~~VgESv~~Pl 88 (329)
T COG1087 11 YIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKI--DAVVHFAASISVGESVQNPL 88 (329)
T ss_pred hhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCC--CEEEECccccccchhhhCHH
Confidence 3344566777788999999998877755433211 011111222 245566666555 33 23466664
Q ss_pred -------hhHHHHHHHHhhccccceEEEeecCCCC
Q 045862 90 -------GTYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 90 -------Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
+|.+.+.-|.+.- .|+.+|+.++....
T Consensus 89 ~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavY 122 (329)
T COG1087 89 KYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVY 122 (329)
T ss_pred HHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhc
Confidence 4555544444433 49999998865443
No 306
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=54.53 E-value=31 Score=23.99 Aligned_cols=15 Identities=20% Similarity=0.335 Sum_probs=11.5
Q ss_pred HHHHHhhCCCeEEee
Q 045862 28 QTIALASLSYRAVAP 42 (271)
Q Consensus 28 ~~~~l~~~g~~vi~~ 42 (271)
.+..|.+.||+|+++
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 456788889998765
No 307
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=54.28 E-value=57 Score=26.15 Aligned_cols=85 Identities=9% Similarity=-0.014 Sum_probs=49.0
Q ss_pred eEEEEeccCCCccch-HHHHHHHhhCCC-------eEEeeCCCCCCCCCCCcccCcchHHhHH--------HHHHHHHHH
Q 045862 11 EILFLYVFPELRYSW-CHQTIALASLSY-------RAVAPDLSGFGDTDELLEMTSYTCFHVI--------GDLIGLIDL 74 (271)
Q Consensus 11 ~vlllHG~~~~~~~~-~~~~~~l~~~g~-------~vi~~D~~G~G~S~~~~~~~~~~~~~~~--------~~l~~~l~~ 74 (271)
.-+++.|.|...-.. +.+...+...|. +++.+|..|-=..+... ....-..++ .+|.++++.
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~--l~~~~~~~a~~~~~~~~~~L~e~i~~ 103 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD--LTPFKKPFARKDEEKEGKSLLEVVKA 103 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc--chHHHHHHHhhcCcccCCCHHHHHHh
Confidence 345566777655443 444555555576 89999999854333221 111112222 356666665
Q ss_pred hCCCCCceEEEEeCh-hhHHHHHHHHhh
Q 045862 75 VAPNDEKMFVVGHDS-GTYMACFLCLFR 101 (271)
Q Consensus 75 l~~~~~~~~lvGhS~-Gg~ia~~~a~~~ 101 (271)
. ++-+|+|-|- ||.+.-.+....
T Consensus 104 v----~ptvlIG~S~~~g~ft~evv~~M 127 (279)
T cd05312 104 V----KPTVLIGLSGVGGAFTEEVVRAM 127 (279)
T ss_pred c----CCCEEEEeCCCCCCCCHHHHHHH
Confidence 5 4578999995 776655555443
No 308
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=54.12 E-value=90 Score=23.31 Aligned_cols=61 Identities=13% Similarity=0.139 Sum_probs=38.6
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHH-HHHHHhCC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLI-GLIDLVAP 77 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~-~~l~~l~~ 77 (271)
+.++++.+--......-...+..|.+.|+.|+-+.. |+- . ...+++++++.+. .+++.+++
T Consensus 115 ~~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~--a-----~p~~~~~~~~~~v~~~~~~l~~ 176 (185)
T PRK06029 115 RRRLVLCVRETPLHLGHLRNMTKLAEMGAIIMPPVP-AFY--H-----RPQTLEDMVDQTVGRVLDLFGI 176 (185)
T ss_pred CCCEEEEeccccCCHHHHHHHHHHHHCcCEEECCCc-ccc--c-----CCCCHHHHHHHHHHHHHHhcCC
Confidence 456777773222222234667888888888887765 321 1 2457888887765 67788887
No 309
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=53.67 E-value=42 Score=24.29 Aligned_cols=53 Identities=23% Similarity=0.199 Sum_probs=33.7
Q ss_pred HHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHH
Q 045862 28 QTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYM 93 (271)
Q Consensus 28 ~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~i 93 (271)
+...+.+ +-.+|++|-+| ...+-+++++.+..+...-.- +-+.+||-+.|=.-
T Consensus 60 il~~l~~-~~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~g~~--~i~F~IGGa~G~~~ 112 (157)
T PRK00103 60 ILAALPK-GARVIALDERG----------KQLSSEEFAQELERWRDDGRS--DVAFVIGGADGLSP 112 (157)
T ss_pred HHhhCCC-CCEEEEEcCCC----------CcCCHHHHHHHHHHHHhcCCc--cEEEEEcCccccCH
Confidence 3344444 34689999887 346667888888776443222 34678888877543
No 310
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=53.63 E-value=19 Score=27.90 Aligned_cols=71 Identities=7% Similarity=-0.108 Sum_probs=49.0
Q ss_pred CceEEEEeccCCCcc--chHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHH-HHHHHHHHHhCCCCCceEEE
Q 045862 9 GPEILFLYVFPELRY--SWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVI-GDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 9 ~~~vlllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~-~~l~~~l~~l~~~~~~~~lv 85 (271)
.|.||++.|+.+++. .-..++..|..+|++|.++.-|-. ++.. .-+-.+-..+... +.+.++
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~--------------eE~~~p~lwRfw~~lP~~-G~i~IF 94 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD--------------RERTQWYFQRYVQHLPAA-GEIVLF 94 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH--------------HHHcChHHHHHHHhCCCC-CeEEEE
Confidence 489999999987765 478899999999999999876621 1222 2234444555432 678888
Q ss_pred EeChhhHHH
Q 045862 86 GHDSGTYMA 94 (271)
Q Consensus 86 GhS~Gg~ia 94 (271)
=-||=+-+.
T Consensus 95 ~rSwY~~~l 103 (230)
T TIGR03707 95 DRSWYNRAG 103 (230)
T ss_pred eCchhhhHH
Confidence 888877643
No 311
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=53.56 E-value=90 Score=23.17 Aligned_cols=60 Identities=10% Similarity=0.126 Sum_probs=36.6
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCC-CCCCCCcccCcchHHhHHHHHH-HHHHHhCC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGF-GDTDELLEMTSYTCFHVIGDLI-GLIDLVAP 77 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~l~-~~l~~l~~ 77 (271)
+.++++.+--......-...+..|.+.|+.++-+.. |+ | ...+++++++.+. .+++.+|+
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~-g~~~--------~p~~~~~~~~~i~~~~l~~lg~ 173 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMP-AFYT--------RPKSVEDMIDFIVGRVLDQLGI 173 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCC-cccC--------CCCCHHHHHHHHHHHHHHHcCC
Confidence 456677763222222235566788888999877654 32 2 2356777776655 66688887
No 312
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=53.48 E-value=11 Score=36.45 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=24.2
Q ss_pred hHHhHHHHHHHHHHHhCCCCCceEEEEeChhhH
Q 045862 60 TCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTY 92 (271)
Q Consensus 60 ~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ 92 (271)
++..+.-.+.+++..+++ .|--+||||.|-+
T Consensus 564 sitAiQiaLtDlLs~lgi--~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 564 SITAIQIALTDLLSCLGI--RPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHHHHHHHhcCC--CCCcccccccchh
Confidence 444455567788888999 8999999999853
No 313
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=53.38 E-value=93 Score=23.25 Aligned_cols=88 Identities=15% Similarity=0.101 Sum_probs=52.5
Q ss_pred EEEEeccCCCccchHHHHHHH----hhCCCeEEeeCCCCCCCCCCCc----------ccCcchHHhHHHHHHHHHHHhCC
Q 045862 12 ILFLYVFPELRYSWCHQTIAL----ASLSYRAVAPDLSGFGDTDELL----------EMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l----~~~g~~vi~~D~~G~G~S~~~~----------~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
||=..|.+..-..|+.+++.| .++|++|.++-........... ....-+.+...-|+.+++..+..
T Consensus 6 IiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~~ 85 (185)
T PF09314_consen 6 IIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALRF 85 (185)
T ss_pred EEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHHH
Confidence 455567777666676665554 5568888887665433221111 01122477888888888877621
Q ss_pred ------CCCceEEEEeChhhHHHHHHHH
Q 045862 78 ------NDEKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 78 ------~~~~~~lvGhS~Gg~ia~~~a~ 99 (271)
..+-++++|.+.|+.+...+-.
T Consensus 86 ~~~~~~~~~ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 86 IKQDKIKYDIILILGYGIGPFFLPFLRK 113 (185)
T ss_pred HhhccccCCEEEEEcCCccHHHHHHHHh
Confidence 0023678999988887765543
No 314
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=53.38 E-value=34 Score=31.26 Aligned_cols=79 Identities=13% Similarity=-0.024 Sum_probs=49.0
Q ss_pred CCceEEEEeccCCC----------ccchHHHHHHHhhCCCeEEeeCCCC---CCCCCCCcccCcch----HHhHHHHHHH
Q 045862 8 QGPEILFLYVFPEL----------RYSWCHQTIALASLSYRAVAPDLSG---FGDTDELLEMTSYT----CFHVIGDLIG 70 (271)
Q Consensus 8 ~~~~vlllHG~~~~----------~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~~~~~~~----~~~~~~~l~~ 70 (271)
++.+||+-|..... ...|..++.+|.++||+++.+|--- .|....+...-..| ..+....+.-
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 35689999997542 2458889999999999999998321 12222222111122 2235567778
Q ss_pred HHHHhCCCCCceEEEEe
Q 045862 71 LIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 71 ~l~~l~~~~~~~~lvGh 87 (271)
+|+..+.+ ..+.++|.
T Consensus 127 ILKkyg~p-ATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWS-AVLAPVGT 142 (672)
T ss_pred HHHHcCCC-EEEEEech
Confidence 89999883 34556663
No 315
>PRK09936 hypothetical protein; Provisional
Probab=52.29 E-value=46 Score=26.76 Aligned_cols=51 Identities=10% Similarity=0.043 Sum_probs=37.4
Q ss_pred CccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC
Q 045862 21 LRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 21 ~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
+...|..+.+.++..|++.+++-+-++|.|+-.. -+.+...+.+.....|+
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl 86 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGL 86 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCC
Confidence 3457999999999999999999999999884333 14444555555555565
No 316
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=52.21 E-value=23 Score=25.51 Aligned_cols=50 Identities=12% Similarity=0.175 Sum_probs=30.9
Q ss_pred HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhH
Q 045862 30 IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTY 92 (271)
Q Consensus 30 ~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ 92 (271)
..+.+ +-.++++|-.| ..++-+++++.|..+...=.- +-+.+||-+.|=.
T Consensus 62 ~~i~~-~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~g~~--~i~F~IGG~~G~~ 111 (155)
T PF02590_consen 62 KKIPP-NDYVILLDERG----------KQLSSEEFAKKLERWMNQGKS--DIVFIIGGADGLS 111 (155)
T ss_dssp CTSHT-TSEEEEE-TTS----------EE--HHHHHHHHHHHHHTTS---EEEEEE-BTTB--
T ss_pred hhccC-CCEEEEEcCCC----------ccCChHHHHHHHHHHHhcCCc--eEEEEEecCCCCC
Confidence 33334 57899999987 457778888888887765222 3477899999843
No 317
>COG0218 Predicted GTPase [General function prediction only]
Probab=50.93 E-value=22 Score=26.75 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=13.5
Q ss_pred EEeeCCCCCCCCCCCc
Q 045862 39 AVAPDLSGFGDTDELL 54 (271)
Q Consensus 39 vi~~D~~G~G~S~~~~ 54 (271)
+..+|+||||....+.
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 7899999999887655
No 318
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=50.76 E-value=46 Score=24.31 Aligned_cols=58 Identities=9% Similarity=0.118 Sum_probs=41.8
Q ss_pred CCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc-c----CcchHHhHHHHHHHHHHHhCC
Q 045862 20 ELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE-M----TSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-~----~~~~~~~~~~~l~~~l~~l~~ 77 (271)
.+...|+..+..+++.|.+.+++-+-|++.....+. . -.....+.++.+.+..+..|.
T Consensus 17 ~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gm 79 (166)
T PF14488_consen 17 WTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGM 79 (166)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCC
Confidence 455679999999999999999888888876543221 0 112445677777788888887
No 319
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=50.75 E-value=32 Score=24.84 Aligned_cols=34 Identities=9% Similarity=-0.070 Sum_probs=26.2
Q ss_pred ceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeC
Q 045862 10 PEILFLYVFPELRYS--WCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 10 ~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D 43 (271)
+.+|++=|++++... =..+...|.+.|+.++.+|
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 578999999988765 3456677888899999998
No 320
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=50.73 E-value=1.1e+02 Score=23.37 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=47.1
Q ss_pred CCceEEEEeccCCCccc-hHHHHHHHhhC-CCeEEeeCCCCCCCCCCCcccC--------cchHHhHHH-----HHHHHH
Q 045862 8 QGPEILFLYVFPELRYS-WCHQTIALASL-SYRAVAPDLSGFGDTDELLEMT--------SYTCFHVIG-----DLIGLI 72 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~-~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~~~~--------~~~~~~~~~-----~l~~~l 72 (271)
..+.|+||+=....... ...+...|.+. |+.+..++... ......... .-+...+.+ .+..++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 45789999877765444 34556777777 88888887643 111000000 001111111 133334
Q ss_pred HHhCCCCCceEEEEeChhhHHHHH
Q 045862 73 DLVAPNDEKMFVVGHDSGTYMACF 96 (271)
Q Consensus 73 ~~l~~~~~~~~lvGhS~Gg~ia~~ 96 (271)
+..-. +...++|.|.|+.+...
T Consensus 108 ~~~~~--~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAALE--RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHH--CCCEEEEECHhHHhhCC
Confidence 33222 35789999999988776
No 321
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=50.69 E-value=66 Score=25.55 Aligned_cols=72 Identities=15% Similarity=0.160 Sum_probs=50.2
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
|.+++..-.+-.......+++.+++.|. -++++|+| -+..+++....+..++ +.+.|+.-+
T Consensus 96 Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP----------------~ee~~~~~~~~~~~gi--~~I~lvaPt 157 (265)
T COG0159 96 PIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP----------------PEESDELLKAAEKHGI--DPIFLVAPT 157 (265)
T ss_pred CEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC----------------hHHHHHHHHHHHHcCC--cEEEEeCCC
Confidence 5555555555555556777888888764 58999998 1456677888889999 889888877
Q ss_pred hhhHHHHHHHH
Q 045862 89 SGTYMACFLCL 99 (271)
Q Consensus 89 ~Gg~ia~~~a~ 99 (271)
..--..-.++.
T Consensus 158 t~~~rl~~i~~ 168 (265)
T COG0159 158 TPDERLKKIAE 168 (265)
T ss_pred CCHHHHHHHHH
Confidence 76554444443
No 322
>PF15566 Imm18: Immunity protein 18
Probab=50.64 E-value=22 Score=20.12 Aligned_cols=30 Identities=13% Similarity=-0.006 Sum_probs=24.1
Q ss_pred HHhHHHHHHHHHHHhCCCCCceEEEEeChhhH
Q 045862 61 CFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTY 92 (271)
Q Consensus 61 ~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ 92 (271)
++.++++|..+...... +.++++--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~--~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPF--DHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCC--CCceecccccccc
Confidence 56677888888777655 7899999999995
No 323
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=50.50 E-value=27 Score=27.12 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=22.9
Q ss_pred HHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 70 GLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 70 ~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
+.+.+.++..+...++|-|.|+.++..++...+
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 333445551013479999999999999998754
No 324
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=50.21 E-value=16 Score=28.18 Aligned_cols=29 Identities=10% Similarity=0.060 Sum_probs=20.1
Q ss_pred EEEEeccCCCccchHHHHHHHhhCCCeEEeeCCC
Q 045862 12 ILFLYVFPELRYSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
=||++|=|-+.+ +.+|+++||+|+.+|+-
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 455555544433 56788899999999974
No 325
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=50.21 E-value=17 Score=27.97 Aligned_cols=30 Identities=20% Similarity=0.007 Sum_probs=21.8
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCC
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
.=+|++|=|-+.+ +.+|+++||+|+.+|+-
T Consensus 39 ~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 39 GRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp EEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 3577777666654 56788889999999974
No 326
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=50.19 E-value=51 Score=20.52 Aligned_cols=42 Identities=19% Similarity=0.328 Sum_probs=26.4
Q ss_pred chHHhHHHHHHHHHHH----hCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 59 YTCFHVIGDLIGLIDL----VAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 59 ~~~~~~~~~l~~~l~~----l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
......+++-.+.++. -+. +++.++|-|.|=.+|..++..+.
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~Gp--K~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGP--KKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS---SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCC--ceEEEEecCCcccHHHHHHHHhc
Confidence 3444444444444444 344 68999999999999988887763
No 327
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=49.72 E-value=11 Score=29.25 Aligned_cols=72 Identities=7% Similarity=-0.096 Sum_probs=42.1
Q ss_pred CceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHH-HHHHHHHHhCCCCCceEEE
Q 045862 9 GPEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIG-DLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-~l~~~l~~l~~~~~~~~lv 85 (271)
.|.||++.|+.+++.. -..+...|-.+|++|.++.-|.- ++... -+-.+-.++... +.+.++
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~pt~--------------eE~~~p~lwRfw~~lP~~-G~I~if 94 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKPTD--------------EELRRPFLWRFWRALPAR-GQIGIF 94 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS--H--------------HHHTS-TTHHHHTTS--T-T-EEEE
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCCCh--------------hHcCCCcHHHHHHhCCCC-CEEEEE
Confidence 3689999999888754 57778888888999999987621 11111 123333444322 678787
Q ss_pred EeChhhHHHH
Q 045862 86 GHDSGTYMAC 95 (271)
Q Consensus 86 GhS~Gg~ia~ 95 (271)
=-||=.-+..
T Consensus 95 ~rSWY~~~l~ 104 (228)
T PF03976_consen 95 DRSWYEDVLV 104 (228)
T ss_dssp ES-GGGGGTH
T ss_pred ecchhhHHHH
Confidence 7787665443
No 328
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=49.71 E-value=73 Score=23.35 Aligned_cols=53 Identities=13% Similarity=0.026 Sum_probs=36.1
Q ss_pred HhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChh
Q 045862 32 LASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSG 90 (271)
Q Consensus 32 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~G 90 (271)
|.+.|++.+++|.=+.=-.... ..-..++.+.+.++.+..+. +++.++-.|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~----~~i~~~~~~~~~~l~~~~~~--~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE----DEIPPEYAEWLNELKKQFGK--DRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc----CcCCHHHHHHHHHHHHHCCC--CeEEEEECCCC
Confidence 8888999999998765322111 12234566666666666665 68999999986
No 329
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=49.65 E-value=1.3e+02 Score=23.98 Aligned_cols=75 Identities=9% Similarity=0.055 Sum_probs=45.9
Q ss_pred HHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE-EeChhhHHHHHHHHhhcc
Q 045862 26 CHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV-GHDSGTYMACFLCLFRAN 103 (271)
Q Consensus 26 ~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv-GhS~Gg~ia~~~a~~~p~ 103 (271)
...+..+.+ .+++++.+|.+|....+ ....+.+.++++.... ..++|| .-++++.-+...+.++..
T Consensus 143 ~~~l~~l~~~~~~D~ViIDt~Gr~~~~----------~~~l~el~~~~~~~~~--~~~~LVl~a~~~~~d~~~~~~~f~~ 210 (270)
T PRK06731 143 TRALTYFKEEARVDYILIDTAGKNYRA----------SETVEEMIETMGQVEP--DYICLTLSASMKSKDMIEIITNFKD 210 (270)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCcCC----------HHHHHHHHHHHhhhCC--CeEEEEEcCccCHHHHHHHHHHhCC
Confidence 344455543 26999999999864321 2344445556655544 445554 456788778778777543
Q ss_pred -ccceEEEee
Q 045862 104 -RIKALVNLS 112 (271)
Q Consensus 104 -~v~~lvl~~ 112 (271)
.+.++|+.-
T Consensus 211 ~~~~~~I~TK 220 (270)
T PRK06731 211 IHIDGIVFTK 220 (270)
T ss_pred CCCCEEEEEe
Confidence 577777744
No 330
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=49.42 E-value=1.8e+02 Score=25.27 Aligned_cols=89 Identities=8% Similarity=-0.031 Sum_probs=51.3
Q ss_pred CceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 9 GPEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
.|.++++-|..+++.+ -..++..|.+.|++|..++.-. +.. ...+.+..+.+.+++ ++ .+
T Consensus 94 ~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~D~------------~R~-aa~eQL~~la~~~gv---p~--~~ 155 (437)
T PRK00771 94 KPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAADT------------YRP-AAYDQLKQLAEKIGV---PF--YG 155 (437)
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecCCC------------CCH-HHHHHHHHHHHHcCC---cE--Ee
Confidence 5778888899887765 4577788888889999887532 111 233445556666666 23 23
Q ss_pred eChh---hHHHHHHHHhhccccceEEEeecCCCC
Q 045862 87 HDSG---TYMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 87 hS~G---g~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
.+.. ..++..+.....+ . -+|+++++...
T Consensus 156 ~~~~~d~~~i~~~al~~~~~-~-DvVIIDTAGr~ 187 (437)
T PRK00771 156 DPDNKDAVEIAKEGLEKFKK-A-DVIIVDTAGRH 187 (437)
T ss_pred cCCccCHHHHHHHHHHHhhc-C-CEEEEECCCcc
Confidence 2211 2222222222222 2 67888877543
No 331
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=49.23 E-value=91 Score=23.92 Aligned_cols=59 Identities=7% Similarity=0.149 Sum_probs=34.8
Q ss_pred eEEEEeccCCCccc-hHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 11 EILFLYVFPELRYS-WCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 11 ~vlllHG~~~~~~~-~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
.|++.||...++.. |..+--.|.+.|| +|++...-|+- ..+++.+.++..++ +.++|+-
T Consensus 140 ~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP---------------~~d~vi~~l~~~~~--~~v~L~P 200 (265)
T COG4822 140 LVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP---------------LVDTVIEYLRKNGI--KEVHLIP 200 (265)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC---------------cHHHHHHHHHHcCC--ceEEEee
Confidence 57777887766654 4444444555577 56655554432 23455666666777 6666654
No 332
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=48.78 E-value=25 Score=28.48 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 67 DLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 67 ~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
-+..+. ..++ .+-++.|-|.|+.+|..++...
T Consensus 87 vl~aL~-e~~l--~~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 87 VVKALW-EQDL--LPRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred HHHHHH-HcCC--CCCEEEEEcHHHHHHHHHHcCC
Confidence 333433 4566 5678999999999999999754
No 333
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=48.36 E-value=36 Score=28.43 Aligned_cols=54 Identities=7% Similarity=0.099 Sum_probs=33.2
Q ss_pred CcccCC----CCC-cchhc---hhHHhhhcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 188 CDLTSV----CGV-KEYIH---KGEFRRDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 188 ~~i~~P----~G~-~D~~~---~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
..+.+| .+. +|.++ +..+.+.+|+.+-+.++|+..|..--. .+.+.+.-|+...
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHHH
Confidence 345666 343 44443 667788899986788999999976432 3333444444443
No 334
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=48.36 E-value=38 Score=24.55 Aligned_cols=54 Identities=7% Similarity=0.026 Sum_probs=29.0
Q ss_pred hHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeec
Q 045862 60 TCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 60 ~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
.+++..+.+.++++.+.-.+.++.+.|-|..|.+-+.++...++.+..++=.++
T Consensus 49 ~~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 49 RVEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344555556666655432226799999999999988888776666666655443
No 335
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=47.79 E-value=44 Score=26.76 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCC-CCceEEEEeChhhHHHHHHHHh---hccccceEEEeecCCCC
Q 045862 64 VIGDLIGLIDLVAPN-DEKMFVVGHDSGTYMACFLCLF---RANRIKALVNLSVVFNP 117 (271)
Q Consensus 64 ~~~~l~~~l~~l~~~-~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~ 117 (271)
+.+.+..-++.+-.+ -.+++|.|-|+|+.-+...-.. .-+++.+.++.+++...
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 344444444444321 1479999999999776654433 23579999999987643
No 336
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=47.61 E-value=40 Score=25.55 Aligned_cols=57 Identities=12% Similarity=-0.003 Sum_probs=34.6
Q ss_pred CceEEEEeccCCCccc---hHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHH
Q 045862 9 GPEILFLYVFPELRYS---WCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDL 74 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~---~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~ 74 (271)
+.+|+++||-....-- -+...+.|.+.|.+|-.-.++|.|.+-. .+...++.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~---------~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS---------PEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---------HHHHHHHHHHHhh
Confidence 4589999999765433 4566788888888788777777664421 3455556666643
No 337
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=46.99 E-value=75 Score=25.38 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=23.9
Q ss_pred eEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCC
Q 045862 11 EILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFG 48 (271)
Q Consensus 11 ~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G 48 (271)
|+|+|-|+++++.. -..+...|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 68999999999876 346667777778999888854444
No 338
>PTZ00445 p36-lilke protein; Provisional
Probab=46.60 E-value=71 Score=24.49 Aligned_cols=22 Identities=18% Similarity=0.099 Sum_probs=18.2
Q ss_pred chHHHHHHHhhCCCeEEeeCCC
Q 045862 24 SWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
.-+.+.+.|.+.|.++++.|+-
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~D 51 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFD 51 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecch
Confidence 3456778899999999999984
No 339
>COG3933 Transcriptional antiterminator [Transcription]
Probab=46.55 E-value=1.3e+02 Score=25.88 Aligned_cols=71 Identities=13% Similarity=0.033 Sum_probs=53.8
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
..||.-||... +.+...++..|-.. --+.++|.| -+.+..+..+.+.+.+++... .+=.++=-.|
T Consensus 110 ~vIiiAHG~sT-ASSmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~--~~GlllLVDM 174 (470)
T COG3933 110 KVIIIAHGYST-ASSMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDY--RSGLLLLVDM 174 (470)
T ss_pred eEEEEecCcch-HHHHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCc--cCceEEEEec
Confidence 46888999854 44466677777665 578999998 567888999999999998877 6655666789
Q ss_pred hhHHHH
Q 045862 90 GTYMAC 95 (271)
Q Consensus 90 Gg~ia~ 95 (271)
|.....
T Consensus 175 GSL~~f 180 (470)
T COG3933 175 GSLTSF 180 (470)
T ss_pred chHHHH
Confidence 986654
No 340
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=46.31 E-value=1.7e+02 Score=24.24 Aligned_cols=91 Identities=11% Similarity=-0.026 Sum_probs=59.7
Q ss_pred CceEEEEeccCCCcc--chHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 9 GPEILFLYVFPELRY--SWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 9 ~~~vlllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
+|.|+++=|..+... ....++.+|.++|++|+.-- | +.--..-++.+..+-+.++. .+|.
T Consensus 138 ~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA----~---------DTFRAaAiEQL~~w~er~gv-----~vI~ 199 (340)
T COG0552 138 KPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA----G---------DTFRAAAIEQLEVWGERLGV-----PVIS 199 (340)
T ss_pred CcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEe----c---------chHHHHHHHHHHHHHHHhCC-----eEEc
Confidence 588888889877654 47899999999999988642 1 12223455777777777776 4555
Q ss_pred eChhh---HHHHHHHHhhccccceEEEeecCCCC
Q 045862 87 HDSGT---YMACFLCLFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 87 hS~Gg---~ia~~~a~~~p~~v~~lvl~~~~~~~ 117 (271)
|..|+ .|+......--.+=--++++++..+.
T Consensus 200 ~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRL 233 (340)
T COG0552 200 GKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRL 233 (340)
T ss_pred cCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccc
Confidence 55676 45544444333344457888876643
No 341
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=46.09 E-value=1.8e+02 Score=25.11 Aligned_cols=70 Identities=13% Similarity=0.116 Sum_probs=41.6
Q ss_pred HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc--ccce
Q 045862 30 IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN--RIKA 107 (271)
Q Consensus 30 ~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~ 107 (271)
..+...+|+++.+|-+|....+ +.+.+.+..+.+.+.. ..+++|--++-|.-+...|..+-+ .+.+
T Consensus 176 ~~~~~~~~DvVIIDTaGr~~~d----------~~l~~eL~~i~~~~~p--~e~lLVvda~tgq~~~~~a~~f~~~v~i~g 243 (428)
T TIGR00959 176 EYAKENGFDVVIVDTAGRLQID----------EELMEELAAIKEILNP--DEILLVVDAMTGQDAVNTAKTFNERLGLTG 243 (428)
T ss_pred HHHHhcCCCEEEEeCCCccccC----------HHHHHHHHHHHHhhCC--ceEEEEEeccchHHHHHHHHHHHhhCCCCE
Confidence 3344457999999999864321 2344555555555555 566666666666666666655443 3566
Q ss_pred EEEe
Q 045862 108 LVNL 111 (271)
Q Consensus 108 lvl~ 111 (271)
+|+.
T Consensus 244 iIlT 247 (428)
T TIGR00959 244 VVLT 247 (428)
T ss_pred EEEe
Confidence 6654
No 342
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=46.06 E-value=81 Score=25.36 Aligned_cols=20 Identities=25% Similarity=0.250 Sum_probs=17.3
Q ss_pred eEEEEeChhhHHHHHHHHhh
Q 045862 82 MFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~~ 101 (271)
-.++|-|.||.+|+.++..+
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 36899999999999998764
No 343
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=44.15 E-value=59 Score=29.53 Aligned_cols=42 Identities=12% Similarity=-0.078 Sum_probs=28.8
Q ss_pred CceEEEEeccCCCcc---chHHHHHHHhhCCCeEEeeCCCCCCCC
Q 045862 9 GPEILFLYVFPELRY---SWCHQTIALASLSYRAVAPDLSGFGDT 50 (271)
Q Consensus 9 ~~~vlllHG~~~~~~---~~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (271)
..|+|+|||.....- .-..+...|...|..|-..-+|+-|.+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 468999999875433 345667788877877666666654433
No 344
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=43.75 E-value=1.8e+02 Score=23.73 Aligned_cols=85 Identities=19% Similarity=0.017 Sum_probs=45.0
Q ss_pred eEEEEeccCCCccchHHHHHHHhhC--CCeEEeeCCCCC---------------CCCCCCcccC--------cchHHhHH
Q 045862 11 EILFLYVFPELRYSWCHQTIALASL--SYRAVAPDLSGF---------------GDTDELLEMT--------SYTCFHVI 65 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~--g~~vi~~D~~G~---------------G~S~~~~~~~--------~~~~~~~~ 65 (271)
+=.|+-|.+. .-....+.++|+++ +.+++++|.-|- |.+-.+.... ..+-++-.
T Consensus 170 ~d~fVagvGT-GGTitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~A~ 248 (300)
T COG0031 170 VDAFVAGVGT-GGTITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEEAI 248 (300)
T ss_pred CCEEEEeCCc-chhHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHHHH
Confidence 3344444433 33355666666654 478999997652 2222221100 11233444
Q ss_pred HHHHHHHHHhCCCCCceEEEEeChhhHHH--HHHHHhhc
Q 045862 66 GDLIGLIDLVAPNDEKMFVVGHDSGTYMA--CFLCLFRA 102 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia--~~~a~~~p 102 (271)
.....+.+..+ +++|-|.|+.++ +.+|.+.+
T Consensus 249 ~~~r~La~~eG------ilvG~SsGA~~~aa~~~a~~~~ 281 (300)
T COG0031 249 ATARRLAREEG------LLVGISSGAALAAALKLAKELP 281 (300)
T ss_pred HHHHHHHHHhC------eeecccHHHHHHHHHHHHHhcC
Confidence 44555555554 599999999654 45555554
No 345
>PRK05920 aromatic acid decarboxylase; Validated
Probab=42.70 E-value=1.5e+02 Score=22.57 Aligned_cols=62 Identities=10% Similarity=0.061 Sum_probs=36.5
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHH-HHHHHHhCC
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDL-IGLIDLVAP 77 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l-~~~l~~l~~ 77 (271)
.+.+||+.+-.......-...+..|.+.|+.|+-++.--++. ..+++++++.+ ..+++.+|+
T Consensus 129 ~~~pvvi~P~~m~~~~~~~~nl~~L~~~G~~ii~P~~g~y~~--------p~~~~~~~~f~~~~~l~~lg~ 191 (204)
T PRK05920 129 ERRKLILVPRETPLSLIHLENMLKLAEAGAIILPAIPAFYHK--------PQTIDDLVDFVVARILDLLGI 191 (204)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEeCCcccccCC--------CCCHHHHHHHHHHHHHHhcCC
Confidence 355777777422223333566788888888887655433332 23445565544 467788886
No 346
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=42.25 E-value=79 Score=19.36 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=21.8
Q ss_pred eEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 82 MFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
+.++| ||.+++++|....+.-..+.++.....
T Consensus 2 vvViG---gG~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 2 VVVIG---GGFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp EEEES---SSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred EEEEC---cCHHHHHHHHHHHHhCcEEEEEeccch
Confidence 56666 677777777776655567777776543
No 347
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=42.14 E-value=58 Score=22.90 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=27.9
Q ss_pred eEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCCC
Q 045862 11 EILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDTD 51 (271)
Q Consensus 11 ~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S~ 51 (271)
|+|.+-|...+... -+.+++.|.++||+|.++=.-+||...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 57788898877765 478899999889999866655665554
No 348
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=41.22 E-value=1e+02 Score=21.66 Aligned_cols=88 Identities=14% Similarity=0.078 Sum_probs=43.7
Q ss_pred cCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCC-----------cccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 18 FPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDEL-----------LEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 18 ~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-----------~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
.||.......++..|+++|++|.++....-+..... ........-.....+..+++.... -++-.
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----DiVh~ 86 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKP----DIVHI 86 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-----SEEEC
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCC----CeEEe
Confidence 344555567888999999999988855544433222 000111222334555666665544 23346
Q ss_pred eChhhHHHHHHHHhhccccceEEEee
Q 045862 87 HDSGTYMACFLCLFRANRIKALVNLS 112 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~lvl~~ 112 (271)
|.........++.. .+..+..+-
T Consensus 87 ~~~~~~~~~~~~~~---~~~~v~~~H 109 (177)
T PF13439_consen 87 HGPPAFWIALLACR---KVPIVYTIH 109 (177)
T ss_dssp CTTHCCCHHHHHHH---CSCEEEEE-
T ss_pred cccchhHHHHHhcc---CCCEEEEeC
Confidence 66665544444443 444444443
No 349
>PF03283 PAE: Pectinacetylesterase
Probab=40.99 E-value=83 Score=26.39 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=25.7
Q ss_pred CceEEEEeChhhHHHHHHHHh----hccccceEEEeecCCCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLF----RANRIKALVNLSVVFNP 117 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~~ 117 (271)
++++|.|.|-||.-++..+.. .|..++-..+.++....
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 679999999999888765543 55545555555554433
No 350
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=40.76 E-value=1e+02 Score=23.71 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=29.7
Q ss_pred eEEEEeccCCCccc-h-HHHHHHHhhCCCeEEeeCC---CCCC
Q 045862 11 EILFLYVFPELRYS-W-CHQTIALASLSYRAVAPDL---SGFG 48 (271)
Q Consensus 11 ~vlllHG~~~~~~~-~-~~~~~~l~~~g~~vi~~D~---~G~G 48 (271)
++|++-|+++++.. + +.++..|.+.+++|+...- +|+-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~~~i~ 44 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYLRGIL 44 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccchhhhhhee
Confidence 68899999988765 3 5778888888899888775 5654
No 351
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=40.31 E-value=47 Score=25.95 Aligned_cols=20 Identities=15% Similarity=0.188 Sum_probs=18.0
Q ss_pred EEEEeChhhHHHHHHHHhhc
Q 045862 83 FVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 83 ~lvGhS~Gg~ia~~~a~~~p 102 (271)
.++|-|.|+.+|..+|+..+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998654
No 352
>PLN02591 tryptophan synthase
Probab=40.18 E-value=1.9e+02 Score=22.90 Aligned_cols=76 Identities=17% Similarity=0.111 Sum_probs=49.6
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
|.|++..-..--......+++.+++.|. -|+.+|+| + +..+.+...++.+++ ..+.++.-+
T Consensus 80 p~ilm~Y~N~i~~~G~~~F~~~~~~aGv~GviipDLP---------------~-ee~~~~~~~~~~~gl--~~I~lv~Pt 141 (250)
T PLN02591 80 PIVLFTYYNPILKRGIDKFMATIKEAGVHGLVVPDLP---------------L-EETEALRAEAAKNGI--ELVLLTTPT 141 (250)
T ss_pred CEEEEecccHHHHhHHHHHHHHHHHcCCCEEEeCCCC---------------H-HHHHHHHHHHHHcCC--eEEEEeCCC
Confidence 4344333333334456778888888775 68999987 1 455677778889999 899999877
Q ss_pred hhhHHHHHHHHhhcc
Q 045862 89 SGTYMACFLCLFRAN 103 (271)
Q Consensus 89 ~Gg~ia~~~a~~~p~ 103 (271)
.----.-.++..-+.
T Consensus 142 t~~~ri~~ia~~~~g 156 (250)
T PLN02591 142 TPTERMKAIAEASEG 156 (250)
T ss_pred CCHHHHHHHHHhCCC
Confidence 765444445544333
No 353
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=40.06 E-value=2.1e+02 Score=23.89 Aligned_cols=75 Identities=8% Similarity=-0.044 Sum_probs=46.4
Q ss_pred EEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhh
Q 045862 12 ILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGT 91 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg 91 (271)
.++|+|+..+.+.-..+++.+...+.+|=.+.+--.|.+... ..+ ++..+.+.++++..|+ .+.+..|.|.
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~----~ps-~e~i~~f~~~L~~~Gi----~vtvR~~~G~ 330 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQ----RPS-PKRIQAFQRVLEQRGV----AVSVRASRGL 330 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCC----CCC-HHHHHHHHHHHHHCCC----eEEEeCCCCC
Confidence 789999999999988888888764333333333222333211 122 3345556667777777 4567899997
Q ss_pred HHHH
Q 045862 92 YMAC 95 (271)
Q Consensus 92 ~ia~ 95 (271)
-|..
T Consensus 331 di~a 334 (345)
T PRK14457 331 DANA 334 (345)
T ss_pred chhh
Confidence 6543
No 354
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=39.80 E-value=52 Score=24.02 Aligned_cols=73 Identities=10% Similarity=0.077 Sum_probs=46.9
Q ss_pred EEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc----cCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 13 LFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE----MTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 13 lllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
|++-|.|++..+=.+++..|..+ |+.-.+-+|.--.|..... -.+|.++.. ...-+++++- +--+|+|.|
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~--~GDvLigIS 117 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQ--PGDVLIGIS 117 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCC--CCCEEEEEe
Confidence 56679999999999999998876 7666666665544422210 124454443 2233456665 556789999
Q ss_pred hhh
Q 045862 89 SGT 91 (271)
Q Consensus 89 ~Gg 91 (271)
..|
T Consensus 118 TSG 120 (176)
T COG0279 118 TSG 120 (176)
T ss_pred CCC
Confidence 888
No 355
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=39.73 E-value=88 Score=22.66 Aligned_cols=56 Identities=5% Similarity=-0.076 Sum_probs=32.2
Q ss_pred HHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-----CCCCCceEEEEeChhhHHHHHH
Q 045862 27 HQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV-----APNDEKMFVVGHDSGTYMACFL 97 (271)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l-----~~~~~~~~lvGhS~Gg~ia~~~ 97 (271)
.+...+++.||.++.+.-|-. .++.....++... +++.+++++---|+-+.+..+.
T Consensus 34 ~l~~~i~~~GY~ilYlTaRp~---------------~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEv 94 (157)
T PF08235_consen 34 ELYRKIADNGYKILYLTARPI---------------GQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREV 94 (157)
T ss_pred HHHHHHHHCCeEEEEECcCcH---------------HHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccc
Confidence 456777888999999886632 2455555666555 4433555554444443333333
No 356
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=39.62 E-value=31 Score=19.23 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=23.6
Q ss_pred cchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 58 SYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 58 ~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
.++.+.|..|+...|..+.+ ..+.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I--~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAI--TQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhccee--eeEEecc
Confidence 46778899999999999998 8888888
No 357
>PRK10867 signal recognition particle protein; Provisional
Probab=39.62 E-value=2.5e+02 Score=24.30 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=39.5
Q ss_pred HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccc--cce
Q 045862 30 IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANR--IKA 107 (271)
Q Consensus 30 ~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~ 107 (271)
......+|+++.+|-+|....+ +.+.+.+..+.+.... ..+++|--++-|.-+...|..+.+. +.+
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~~d----------~~lm~eL~~i~~~v~p--~evllVlda~~gq~av~~a~~F~~~~~i~g 244 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLHID----------EELMDELKAIKAAVNP--DEILLVVDAMTGQDAVNTAKAFNEALGLTG 244 (433)
T ss_pred HHHHhcCCCEEEEeCCCCcccC----------HHHHHHHHHHHHhhCC--CeEEEEEecccHHHHHHHHHHHHhhCCCCE
Confidence 3444457999999999865321 2233444444444444 4556666565555566666554432 456
Q ss_pred EEE
Q 045862 108 LVN 110 (271)
Q Consensus 108 lvl 110 (271)
+|+
T Consensus 245 iIl 247 (433)
T PRK10867 245 VIL 247 (433)
T ss_pred EEE
Confidence 665
No 358
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=39.60 E-value=50 Score=25.92 Aligned_cols=21 Identities=24% Similarity=0.290 Sum_probs=17.8
Q ss_pred eEEEEeChhhHHHHHHHHhhc
Q 045862 82 MFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~~~p 102 (271)
-.+.|-|.|+.+|..+|...+
T Consensus 32 d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 32 NKISGASAGALAACCLLCDLP 52 (245)
T ss_pred CeEEEEcHHHHHHHHHHhCCc
Confidence 349999999999999998654
No 359
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=39.09 E-value=2.3e+02 Score=23.77 Aligned_cols=73 Identities=11% Similarity=-0.018 Sum_probs=44.6
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcc-cCcchHHhHHHHHHHHHHHhCCCCCceEE-
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSY-RAVAPDLSGFGDTDELLE-MTSYTCFHVIGDLIGLIDLVAPNDEKMFV- 84 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~~~l- 84 (271)
.+.||++--|...+.+.|...++.+...|- +++.. .|| -|..+.. ....++. .+..+-+..++ |+.+
T Consensus 224 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~-erg--~s~yp~~~~~~ldl~----~i~~lk~~~~~---PV~~d 293 (360)
T PRK12595 224 VNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILC-ERG--IRTYEKATRNTLDIS----AVPILKQETHL---PVMVD 293 (360)
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEE-CCc--cCCCCCCCCCCcCHH----HHHHHHHHhCC---CEEEe
Confidence 477999999999999999999999988765 44444 333 2332221 0112221 12222233455 5777
Q ss_pred EEeChh
Q 045862 85 VGHDSG 90 (271)
Q Consensus 85 vGhS~G 90 (271)
..||.|
T Consensus 294 ~~Hs~G 299 (360)
T PRK12595 294 VTHSTG 299 (360)
T ss_pred CCCCCc
Confidence 799988
No 360
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=39.08 E-value=78 Score=23.15 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=23.6
Q ss_pred EEEEeccCCCccchHHHHHHHhhCCCeEEeeCC
Q 045862 12 ILFLYVFPELRYSWCHQTIALASLSYRAVAPDL 44 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~ 44 (271)
-|++.|.|.+...-..+...|...|..+..++-
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~ 64 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGE 64 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 478889888766556666667766788877743
No 361
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=39.00 E-value=2.3e+02 Score=23.60 Aligned_cols=43 Identities=14% Similarity=0.041 Sum_probs=25.8
Q ss_pred cccccC-------CCceEEEEeccCCCc--cchHHHHHHHhhCCCeEEeeCCC
Q 045862 2 HVAEKG-------QGPEILFLYVFPELR--YSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 2 ~y~~~g-------~~~~vlllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
||...| ++++=+|+||.|... ..-.+.+..-.. +..|+..|.-
T Consensus 197 hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~-~~kVv~vdp~ 248 (362)
T KOG1252|consen 197 HYETTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNP-NIKVVGVDPQ 248 (362)
T ss_pred ccccccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCC-CCEEEEeCCC
Confidence 566555 467778888876443 334444444433 4788888864
No 362
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=38.45 E-value=1.1e+02 Score=23.68 Aligned_cols=72 Identities=11% Similarity=0.068 Sum_probs=36.8
Q ss_pred HHHHHHHhhCCCe-EEeeCCCCCCCCCCCcc------cCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHH
Q 045862 26 CHQTIALASLSYR-AVAPDLSGFGDTDELLE------MTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLC 98 (271)
Q Consensus 26 ~~~~~~l~~~g~~-vi~~D~~G~G~S~~~~~------~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a 98 (271)
..++...+++ .. +++.=---+|.|..... ....++..+..|+..-+.+.|. ++++++-...|-.-++..+
T Consensus 43 ~~~a~~~a~~-~~~~lv~P~i~yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf--~~ivivngHgGN~~~l~~~ 119 (237)
T PF02633_consen 43 EAVAERAAER-LGEALVLPPIPYGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGF--RRIVIVNGHGGNIAALEAA 119 (237)
T ss_dssp HHHHHHHHHH-HTHEEE---B--BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT----EEEEEESSTTHHHHHHHH
T ss_pred HHHHHHHHHH-CCcEEEeCCCccccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCC--CEEEEEECCHhHHHHHHHH
Confidence 4555666554 33 44433334666543321 1234666777777777777899 8888877665544455555
Q ss_pred Hh
Q 045862 99 LF 100 (271)
Q Consensus 99 ~~ 100 (271)
.+
T Consensus 120 ~~ 121 (237)
T PF02633_consen 120 AR 121 (237)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 363
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=38.29 E-value=54 Score=25.86 Aligned_cols=22 Identities=9% Similarity=0.042 Sum_probs=18.7
Q ss_pred ceEEEEeChhhHHHHHHHHhhc
Q 045862 81 KMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.-.++|-|.|+.++..+++..+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 4569999999999999998654
No 364
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=37.33 E-value=40 Score=24.61 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=27.4
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEe
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVA 41 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~ 41 (271)
..+.|+++-|-+.+..+=--.+++|...|++|.+
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 4678999999998887777788999888999888
No 365
>PRK10115 protease 2; Provisional
Probab=36.85 E-value=1.5e+02 Score=27.43 Aligned_cols=66 Identities=18% Similarity=0.132 Sum_probs=42.6
Q ss_pred CCceEEEEeccCCCccc-h--HHHHHHHhhCCC--eEEee---CCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC
Q 045862 8 QGPEILFLYVFPELRYS-W--CHQTIALASLSY--RAVAP---DLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~-~--~~~~~~l~~~g~--~vi~~---D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
..|+++++||.-...-. | ..+...|+++|. +.+.+ .--|||..+. ....+++.|..+.-+++.++.
T Consensus 605 ~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~----r~~~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 605 AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSG----RFKSYEGVAMEYAFLIALAQG 678 (686)
T ss_pred CCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcC----HHHHHHHHHHHHHHHHHHhCC
Confidence 45789999999865433 3 346677776554 33444 4468874322 234677888888888888764
No 366
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.58 E-value=71 Score=25.99 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCC--CCCceEEEEeC--hhhHHHHHHHHhhccccceEEEee
Q 045862 64 VIGDLIGLIDLVAP--NDEKMFVVGHD--SGTYMACFLCLFRANRIKALVNLS 112 (271)
Q Consensus 64 ~~~~l~~~l~~l~~--~~~~~~lvGhS--~Gg~ia~~~a~~~p~~v~~lvl~~ 112 (271)
-+..+.+++++.++ .++++.++|-| ||-.+|..+..+. ..+.+++
T Consensus 142 Tp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g----atVtv~~ 190 (301)
T PRK14194 142 TPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH----CSVTVVH 190 (301)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC----CEEEEEC
Confidence 35667888888764 24689999986 9999999888642 4455554
No 367
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=36.48 E-value=1.4e+02 Score=24.69 Aligned_cols=98 Identities=10% Similarity=0.043 Sum_probs=53.0
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChh
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSG 90 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~G 90 (271)
+++++.- +.+..|..+.+.+..+++.-.-.=++-+|..-... ..-....-...+..++..+.- .+++|||-|-=
T Consensus 215 pvfYvSn--SPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i--~~sga~rK~~~l~nil~~~p~--~kfvLVGDsGE 288 (373)
T COG4850 215 PVFYVSN--SPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNI--IESGAARKGQSLRNILRRYPD--RKFVLVGDSGE 288 (373)
T ss_pred CeEEecC--ChhHhHHHHHHHHhcCCCCCCchhHhhcCCccccc--ccchhhhcccHHHHHHHhCCC--ceEEEecCCCC
Confidence 5666521 12233555556665554443333333333111100 111222233445556777766 89999997743
Q ss_pred h--HHHHHHHHhhccccceEEEeecC
Q 045862 91 T--YMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 91 g--~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
= -|=..++..+|++|.++.+=+..
T Consensus 289 ~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 289 HDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred cCHHHHHHHHHhCccceeeEeeeecc
Confidence 2 34446677899999998887765
No 368
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.00 E-value=58 Score=25.64 Aligned_cols=22 Identities=18% Similarity=0.096 Sum_probs=18.4
Q ss_pred ceEEEEeChhhHHHHHHHHhhc
Q 045862 81 KMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 81 ~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
.-.++|-|.|+.+|..+++..+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 4568999999999999988654
No 369
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.96 E-value=2.8e+02 Score=23.75 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=36.7
Q ss_pred HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc--ccce
Q 045862 30 IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN--RIKA 107 (271)
Q Consensus 30 ~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~ 107 (271)
+.+.+.+|.||.+|-.|.-.- -..+-+.+.++.+.+.. +.+++|=-+.=|.-|..-|..+.+ .|.+
T Consensus 177 ~~fKke~fdvIIvDTSGRh~q----------e~sLfeEM~~v~~ai~P--d~vi~VmDasiGQaae~Qa~aFk~~vdvg~ 244 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRHKQ----------EASLFEEMKQVSKAIKP--DEIIFVMDASIGQAAEAQARAFKETVDVGA 244 (483)
T ss_pred HHHHhcCCcEEEEeCCCchhh----------hHHHHHHHHHHHhhcCC--CeEEEEEeccccHhHHHHHHHHHHhhccce
Confidence 445666899999998764321 22344555555666665 555554444444444444444433 2444
Q ss_pred EEE
Q 045862 108 LVN 110 (271)
Q Consensus 108 lvl 110 (271)
+|+
T Consensus 245 vIl 247 (483)
T KOG0780|consen 245 VIL 247 (483)
T ss_pred EEE
Confidence 444
No 370
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=35.87 E-value=44 Score=27.31 Aligned_cols=20 Identities=35% Similarity=0.426 Sum_probs=17.6
Q ss_pred CceEEEEeChhhHHHHHHHH
Q 045862 80 EKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~ 99 (271)
.+..+.|||+|=+.|+.++.
T Consensus 85 ~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCceeecccHhHHHHHHHcc
Confidence 78899999999999987765
No 371
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=35.75 E-value=1.6e+02 Score=25.14 Aligned_cols=18 Identities=11% Similarity=0.239 Sum_probs=15.9
Q ss_pred CeEEeeCCCCCCCCCCCc
Q 045862 37 YRAVAPDLSGFGDTDELL 54 (271)
Q Consensus 37 ~~vi~~D~~G~G~S~~~~ 54 (271)
|+||++|.|.++.|....
T Consensus 291 fDlIilDPPsF~r~k~~~ 308 (393)
T COG1092 291 FDLIILDPPSFARSKKQE 308 (393)
T ss_pred ccEEEECCcccccCcccc
Confidence 999999999999987554
No 372
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=35.09 E-value=80 Score=23.26 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=34.1
Q ss_pred cchHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 23 YSWCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 23 ~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
..+..+.+.+.. .+.+++++|....=...... .......+...+..+.+..+. .++++.|.
T Consensus 127 ~~~~~l~~~~~~~~~~~lvviD~l~~~~~~~~~--~~~~~~~~~~~l~~la~~~~~---~vi~v~H~ 188 (193)
T PF13481_consen 127 EDLEELEAALKELYGPDLVVIDPLQSLHDGDEN--SNSAVAQLMQELKRLAKEYGV---AVILVHHT 188 (193)
T ss_dssp HHHHHHHHHHTT----SEEEEE-GGGG--S-TT---HHHHHHHHHHHHHHHHHH-----EEEEEEEE
T ss_pred HHHHHHHHHHhhcCCCcEEEEcCHHHHhcCCCC--CHHHHHHHHHHHHHHHHHcCC---EEEEEECC
Confidence 345667777776 47899999965432221111 223346788888888888876 57777774
No 373
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=34.97 E-value=49 Score=25.41 Aligned_cols=17 Identities=24% Similarity=0.231 Sum_probs=13.7
Q ss_pred HHHHhhCCCeEEeeCCC
Q 045862 29 TIALASLSYRAVAPDLS 45 (271)
Q Consensus 29 ~~~l~~~g~~vi~~D~~ 45 (271)
+.+|+++|++|+++|.-
T Consensus 52 a~~LA~~G~~V~avD~s 68 (218)
T PRK13255 52 MLWLAEQGHEVLGVELS 68 (218)
T ss_pred HHHHHhCCCeEEEEccC
Confidence 45677889999999963
No 374
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=34.90 E-value=76 Score=22.85 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=32.6
Q ss_pred HHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHH
Q 045862 27 HQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMA 94 (271)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia 94 (271)
.+...+.+ -.|++.|-+| ..++-+++++.+..+.+. +. +-+.+||-+.|=.=.
T Consensus 58 ~il~~~~~--~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~-g~--~i~FvIGGa~G~~~~ 110 (153)
T TIGR00246 58 RILAAIGK--AHVVTLDIPG----------KPWTTPQLADTLEKWKTD-GR--DVTLLIGGPEGLSPT 110 (153)
T ss_pred HHHHhCCC--CeEEEEcCCC----------CcCCHHHHHHHHHHHhcc-CC--eEEEEEcCCCcCCHH
Confidence 34444442 4688888887 345667777777776432 22 456788888775433
No 375
>PLN02735 carbamoyl-phosphate synthase
Probab=34.63 E-value=1.4e+02 Score=29.43 Aligned_cols=70 Identities=19% Similarity=0.160 Sum_probs=43.8
Q ss_pred HHHHHHhhCCCeEEeeCCCCCCCCCCCc-ccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhh
Q 045862 27 HQTIALASLSYRAVAPDLSGFGDTDELL-EMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFR 101 (271)
Q Consensus 27 ~~~~~l~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~ 101 (271)
+.+..|.+.|+.+++++....--|.... ....|......+++..+++..++ + .|=-++||-.++.+|...
T Consensus 599 ~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e~~--d---~Vi~~~Ggq~~l~la~~l 669 (1102)
T PLN02735 599 HASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLERP--D---GIIVQFGGQTPLKLALPI 669 (1102)
T ss_pred HHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHhCC--C---EEEECCCchHHHHHHHHH
Confidence 5678899999999999976544442211 11223344457788888887766 3 233357777776666543
No 376
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=34.41 E-value=65 Score=26.95 Aligned_cols=51 Identities=18% Similarity=0.203 Sum_probs=30.1
Q ss_pred HHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE
Q 045862 30 IALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV 85 (271)
Q Consensus 30 ~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv 85 (271)
-.|.++||+|+.+-++-....+... .....++-.+|...+.++|++ +++++
T Consensus 18 ~LLk~~G~~V~Gv~m~~~~~~~~~~--~~c~~~~d~~~a~~va~~LgI---p~~v~ 68 (356)
T PF03054_consen 18 ALLKEQGYDVIGVTMRNWDEEDESG--KSCCSEEDIEDARRVAEKLGI---PHYVV 68 (356)
T ss_dssp HHHHHCT-EEEEEEEE-SS-SSSHH---HHHHHHHHHHHHHHHHHHT-----EEEE
T ss_pred HHHHhhcccceEEEEEEeccccccC--CCCCchhhHHHHHHHHHhcCC---CEEEE
Confidence 3456779999999887665533222 123445667888889999988 44444
No 377
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=34.21 E-value=1.2e+02 Score=21.53 Aligned_cols=49 Identities=8% Similarity=-0.021 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 66 GDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
.++.++++..++ +.++++|-+....+...+...+....+-.|+.++...
T Consensus 88 t~l~~~L~~~gi--~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 88 TDLEEWLREAGI--DHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CCHHHHHHHCCC--CEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 467788888999 8999999999887777665555555666777666544
No 378
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=33.92 E-value=49 Score=26.54 Aligned_cols=70 Identities=19% Similarity=0.158 Sum_probs=41.8
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCC--------CCCCCCCc---cc--CcchHHhHHHHHHHHHHHhC
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSG--------FGDTDELL---EM--TSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G--------~G~S~~~~---~~--~~~~~~~~~~~l~~~l~~l~ 76 (271)
|.|+|.-|.++ .++.|+..||.|+..||-- .|..-... ++ ---+.+...+-+.+.++..|
T Consensus 253 Pmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 67888877654 3577888899999999842 11110000 00 11245666677777788777
Q ss_pred CCCCceE-EEEeC
Q 045862 77 PNDEKMF-VVGHD 88 (271)
Q Consensus 77 ~~~~~~~-lvGhS 88 (271)
. .+.+ =+||.
T Consensus 326 ~--~ryI~NLGHG 336 (359)
T KOG2872|consen 326 K--SRYIANLGHG 336 (359)
T ss_pred c--cceEEecCCC
Confidence 6 4433 36664
No 379
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=33.84 E-value=2.4e+02 Score=24.24 Aligned_cols=67 Identities=12% Similarity=0.053 Sum_probs=45.0
Q ss_pred HHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcccc
Q 045862 26 CHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRI 105 (271)
Q Consensus 26 ~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 105 (271)
..++..|.+.|.+|+++- ..+.+++-..+...++..+. ++.+++ .-||.++..+...+|+..
T Consensus 75 d~vaa~l~~~gi~v~a~~--------------~~~~~~y~~~~~~~l~~~~~--~p~~i~--DdGg~~~~~~~~~~~~~~ 136 (413)
T cd00401 75 DHAAAAIAAAGIPVFAWK--------------GETLEEYWWCIEQALKFPDG--EPNMIL--DDGGDLTLLIHKKHPELL 136 (413)
T ss_pred HHHHHHHHhcCceEEEEc--------------CCCHHHHHHHHHHHHhccCC--CCcEEE--ecchHHHHHHHhhhhhhh
Confidence 455666766666665542 34566777778888877554 555555 889999988887777765
Q ss_pred ceEEE
Q 045862 106 KALVN 110 (271)
Q Consensus 106 ~~lvl 110 (271)
..++-
T Consensus 137 ~~~~G 141 (413)
T cd00401 137 PGIRG 141 (413)
T ss_pred hccEE
Confidence 55554
No 380
>cd00423 Pterin_binding Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=33.46 E-value=1e+02 Score=24.29 Aligned_cols=25 Identities=16% Similarity=0.101 Sum_probs=14.8
Q ss_pred hHHHHHHHhhCC--CeEEeeCCCCCCCC
Q 045862 25 WCHQTIALASLS--YRAVAPDLSGFGDT 50 (271)
Q Consensus 25 ~~~~~~~l~~~g--~~vi~~D~~G~G~S 50 (271)
+...++.+.+.| ..=|.+| ||.|..
T Consensus 152 ~~~~i~~~~~~Gi~~~~IilD-Pg~g~~ 178 (258)
T cd00423 152 LEERVEAATEAGIPPEDIILD-PGIGFG 178 (258)
T ss_pred HHHHHHHHHHcCCCHHHEEEe-CCCCcc
Confidence 344555566667 3457777 576644
No 381
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=33.39 E-value=1.3e+02 Score=24.54 Aligned_cols=30 Identities=10% Similarity=0.096 Sum_probs=18.1
Q ss_pred eEEEEeccCCCccchHHHHHHHhh--CCCeEEeeC
Q 045862 11 EILFLYVFPELRYSWCHQTIALAS--LSYRAVAPD 43 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~--~g~~vi~~D 43 (271)
-||+.|| ++.....|...-++ +-|+|++.|
T Consensus 164 EviLT~g---~SrTV~~FL~~A~kk~Rkf~viVaE 195 (353)
T KOG1465|consen 164 EVILTLG---SSRTVENFLKHAAKKGRKFRVIVAE 195 (353)
T ss_pred ceEEecC---ccHHHHHHHHHHHhccCceEEEEee
Confidence 4788888 44444444433333 348888876
No 382
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=33.21 E-value=1.4e+02 Score=22.00 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=27.2
Q ss_pred CCceEEEEeccC---CCccchHHHHHHHhhCCCeEEeeCC
Q 045862 8 QGPEILFLYVFP---ELRYSWCHQTIALASLSYRAVAPDL 44 (271)
Q Consensus 8 ~~~~vlllHG~~---~~~~~~~~~~~~l~~~g~~vi~~D~ 44 (271)
.+.+|++.+.+. ......+..++.|.+.|+.|+-++.
T Consensus 111 ~~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 111 PETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 456788888554 3444567888999998998888875
No 383
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.15 E-value=1e+02 Score=23.83 Aligned_cols=39 Identities=10% Similarity=-0.071 Sum_probs=28.2
Q ss_pred cCCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCC
Q 045862 6 KGQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 6 ~g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
.++.|+.|+|-|-... ..-..++..|++.||+|++--.+
T Consensus 3 ~~~~~k~VlItgcs~G-GIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 3 LQSQPKKVLITGCSSG-GIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred cccCCCeEEEeecCCc-chhHHHHHHHHhCCeEEEEEccc
Confidence 4566788888764433 34456788899999999998765
No 384
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=33.12 E-value=60 Score=28.32 Aligned_cols=30 Identities=10% Similarity=0.090 Sum_probs=24.5
Q ss_pred eEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 214 EITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 214 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
.+.++ .+||+++.++|+...+.+..|+...
T Consensus 462 ~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 462 FLRIY-EAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred EEEEe-cCcceeecCChHHHHHHHHHHHhhc
Confidence 34445 5899999999999999999988753
No 385
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=32.84 E-value=1.8e+02 Score=20.69 Aligned_cols=48 Identities=4% Similarity=0.000 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 67 DLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 67 ~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
++..+++..++ +.++++|.+.-..+..-+...+.....-+++.++...
T Consensus 78 ~L~~~L~~~gi--~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da~as 125 (157)
T cd01012 78 AFRKALKATGR--KQVVLAGLETHVCVLQTALDLLEEGYEVFVVADACGS 125 (157)
T ss_pred HHHHHHHhcCC--CEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeCCCC
Confidence 66778888999 9999999999988877766555556777777776653
No 386
>PRK07933 thymidylate kinase; Validated
Probab=32.81 E-value=1.1e+02 Score=23.37 Aligned_cols=39 Identities=8% Similarity=0.007 Sum_probs=29.8
Q ss_pred EEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCCCC
Q 045862 12 ILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFGDT 50 (271)
Q Consensus 12 vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (271)
+|.+=|.-+++.+ -..+.++|..+|+.|++...|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4556677665543 67888999999999999999987744
No 387
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=32.44 E-value=72 Score=25.00 Aligned_cols=18 Identities=22% Similarity=0.314 Sum_probs=16.1
Q ss_pred eEEEEeChhhHHHHHHHH
Q 045862 82 MFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~ 99 (271)
-.+.|-|.|+.+|..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 379999999999999984
No 388
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=32.38 E-value=83 Score=22.58 Aligned_cols=37 Identities=14% Similarity=0.001 Sum_probs=27.9
Q ss_pred EEEEeccCCCccch--HHHHHHHhhCCCeEEeeCCCCCC
Q 045862 12 ILFLYVFPELRYSW--CHQTIALASLSYRAVAPDLSGFG 48 (271)
Q Consensus 12 vlllHG~~~~~~~~--~~~~~~l~~~g~~vi~~D~~G~G 48 (271)
|+.+-|..++.... ..++..|.++|++|.++..-+++
T Consensus 1 vi~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 1 VLQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 35566877776653 78888898889999999876655
No 389
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=32.32 E-value=1.1e+02 Score=22.31 Aligned_cols=38 Identities=24% Similarity=0.268 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHhCC--CCCceEEEEeC--hhhHHHHHHHHh
Q 045862 63 HVIGDLIGLIDLVAP--NDEKMFVVGHD--SGTYMACFLCLF 100 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~--~~~~~~lvGhS--~Gg~ia~~~a~~ 100 (271)
--+..+.+++++.+. .++++.++|.| .|-.+++.+..+
T Consensus 18 cTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 18 CTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 355667777877653 34689999999 688888887765
No 390
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=32.24 E-value=2.4e+02 Score=21.86 Aligned_cols=16 Identities=0% Similarity=-0.116 Sum_probs=8.3
Q ss_pred ChHHHHHHHHHHHhhh
Q 045862 229 KGHQLETEIGTSRGEK 244 (271)
Q Consensus 229 ~p~~~~~~i~~fl~~~ 244 (271)
+++++.+...+.+.+.
T Consensus 235 ~~~~~g~~a~~~l~~~ 250 (273)
T cd06292 235 PVEEMAAAAVDRLMAR 250 (273)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 4556666555544443
No 391
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.20 E-value=67 Score=21.89 Aligned_cols=31 Identities=16% Similarity=0.324 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHHHH
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMAC 95 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~ 95 (271)
.....++..+..++. +.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v--~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGV--KHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCC--CEEEEEccCCCcHHHH
Confidence 456677777889999 9999999976665543
No 392
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=32.13 E-value=59 Score=30.15 Aligned_cols=20 Identities=15% Similarity=0.258 Sum_probs=17.5
Q ss_pred CceEEEEeChhhHHHHHHHH
Q 045862 80 EKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~ 99 (271)
..-++.|.|.||.++..+|.
T Consensus 66 ~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 66 RVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCceEEeeCHHHHHHHHHHc
Confidence 45689999999999999886
No 393
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=32.02 E-value=1.3e+02 Score=21.66 Aligned_cols=49 Identities=8% Similarity=-0.021 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 65 IGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 65 ~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
..++..+++..++ +.++|+|.+.-..|..-+...+-..+.-.|+.++..
T Consensus 100 ~t~L~~~L~~~gi--~~vil~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~ 148 (174)
T PF00857_consen 100 GTDLDEILRKRGI--DTVILCGVATDVCVLATARDAFDRGYRVIVVEDACA 148 (174)
T ss_dssp TSSHHHHHHHTTE--SEEEEEEESTTTHHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred ccccccccccccc--ceEEEcccccCcEEehhHHHHHHCCCEEEEEChhhc
Confidence 3578888999999 999999999999887666555555577777777654
No 394
>PRK03846 adenylylsulfate kinase; Provisional
Probab=31.87 E-value=97 Score=23.15 Aligned_cols=36 Identities=17% Similarity=0.016 Sum_probs=25.6
Q ss_pred CCceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeC
Q 045862 8 QGPEILFLYVFPELRYS--WCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D 43 (271)
..|.++.+.|..++..+ -..+...|...|+.++.+|
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 45778889998877764 4455566666677778776
No 395
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=31.87 E-value=2.4e+02 Score=24.16 Aligned_cols=102 Identities=12% Similarity=-0.017 Sum_probs=58.8
Q ss_pred EEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc----cCcchHHhHHHHHHHHHHHhCCCCCceEEEEe
Q 045862 12 ILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE----MTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGh 87 (271)
++++---.+..+.-....+.+...+.-|+-+|+.++=.--...+ .....++.+++++......-.. ...+|.|-
T Consensus 51 villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~y--r~PVl~g~ 128 (456)
T COG3946 51 VILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVY--RLPVLTGP 128 (456)
T ss_pred eEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCc--ccceEeec
Confidence 44443323333333344566777788999999887643321111 1123455555555444332222 34678889
Q ss_pred ChhhHHHHHHHHhhcc-ccceEEEeecCC
Q 045862 88 DSGTYMACFLCLFRAN-RIKALVNLSVVF 115 (271)
Q Consensus 88 S~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 115 (271)
--||.+++..+++-|+ .+.+.+-+++..
T Consensus 129 g~Gg~~A~asaaqSp~atlag~Vsldp~~ 157 (456)
T COG3946 129 GQGGTLAYASAAQSPDATLAGAVSLDPTP 157 (456)
T ss_pred CCCcHHHHHHHhhChhhhhcCccCCCCCC
Confidence 9999999999988875 456666655543
No 396
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=31.83 E-value=75 Score=23.30 Aligned_cols=34 Identities=18% Similarity=0.012 Sum_probs=23.5
Q ss_pred EEEEeccCCCccch--HHHHHHHhhCCCeEEeeCCC
Q 045862 12 ILFLYVFPELRYSW--CHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 12 vlllHG~~~~~~~~--~~~~~~l~~~g~~vi~~D~~ 45 (271)
|.+..+-||.+.+. ..++..|+++|++|+.+|.=
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred CEEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 34556666665553 45678888889999999984
No 397
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=31.72 E-value=2e+02 Score=22.94 Aligned_cols=80 Identities=19% Similarity=0.232 Sum_probs=50.4
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
|.+++..-.+--......+++.+++.|. .|+.+|+|- +..+++...++..++ ..+.++.-.
T Consensus 93 p~vlm~Y~N~i~~~G~e~F~~~~~~aGvdgviipDLP~----------------ee~~~~~~~~~~~gi--~~I~lv~Pt 154 (263)
T CHL00200 93 PIVIFTYYNPVLHYGINKFIKKISQAGVKGLIIPDLPY----------------EESDYLISVCNLYNI--ELILLIAPT 154 (263)
T ss_pred CEEEEecccHHHHhCHHHHHHHHHHcCCeEEEecCCCH----------------HHHHHHHHHHHHcCC--CEEEEECCC
Confidence 4444433333334455778888888775 588899871 346677788889999 889998877
Q ss_pred hhhHHHHHHHHhhccccceEEEe
Q 045862 89 SGTYMACFLCLFRANRIKALVNL 111 (271)
Q Consensus 89 ~Gg~ia~~~a~~~p~~v~~lvl~ 111 (271)
.----...++.. ..++|.+
T Consensus 155 T~~eri~~i~~~----a~gFIY~ 173 (263)
T CHL00200 155 SSKSRIQKIARA----APGCIYL 173 (263)
T ss_pred CCHHHHHHHHHh----CCCcEEE
Confidence 754433344432 3445544
No 398
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=31.48 E-value=56 Score=24.98 Aligned_cols=17 Identities=29% Similarity=0.231 Sum_probs=13.9
Q ss_pred HHHHhhCCCeEEeeCCC
Q 045862 29 TIALASLSYRAVAPDLS 45 (271)
Q Consensus 29 ~~~l~~~g~~vi~~D~~ 45 (271)
+.+|+++|++|+++|.-
T Consensus 49 a~~LA~~G~~V~gvD~S 65 (213)
T TIGR03840 49 LAWLAEQGHRVLGVELS 65 (213)
T ss_pred HHHHHhCCCeEEEEeCC
Confidence 46678889999999963
No 399
>PRK13529 malate dehydrogenase; Provisional
Probab=31.44 E-value=1.4e+02 Score=26.65 Aligned_cols=84 Identities=10% Similarity=-0.069 Sum_probs=46.9
Q ss_pred eEEEEeccCCCccch-HHHHHHHhhCCC-------eEEeeCCCCCCCCCCCcccCcchHHhHH---------------HH
Q 045862 11 EILFLYVFPELRYSW-CHQTIALASLSY-------RAVAPDLSGFGDTDELLEMTSYTCFHVI---------------GD 67 (271)
Q Consensus 11 ~vlllHG~~~~~~~~-~~~~~~l~~~g~-------~vi~~D~~G~G~S~~~~~~~~~~~~~~~---------------~~ 67 (271)
.-+++.|.|...-.. +.+...+...|. +++.+|..|-=..+... ....-..++ .+
T Consensus 296 ~riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~--l~~~k~~fa~~~~~~~~~~~~~~~~~ 373 (563)
T PRK13529 296 QRIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPD--LLDFQKPYARKREELADWDTEGDVIS 373 (563)
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCc--chHHHHHHhhhcccccccccccCCCC
Confidence 345556777655443 444555555566 89999999854333221 011111222 23
Q ss_pred HHHHHHHhCCCCCceEEEEeCh-hhHHHHHHHHh
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDS-GTYMACFLCLF 100 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~-Gg~ia~~~a~~ 100 (271)
+.++++.. ++-+|||-|- ||.+.-.+...
T Consensus 374 L~e~v~~~----kPtvLIG~S~~~g~Ft~evv~~ 403 (563)
T PRK13529 374 LLEVVRNV----KPTVLIGVSGQPGAFTEEIVKE 403 (563)
T ss_pred HHHHHhcc----CCCEEEEecCCCCCCCHHHHHH
Confidence 45555543 5689999998 77555544443
No 400
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B.
Probab=31.29 E-value=1e+02 Score=22.11 Aligned_cols=66 Identities=11% Similarity=-0.048 Sum_probs=32.7
Q ss_pred CCccchHHHHHHHhhCCCeEEeeCC--CCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHH
Q 045862 20 ELRYSWCHQTIALASLSYRAVAPDL--SGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYM 93 (271)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~i 93 (271)
++...|.++-+.+.+ .+++++|. ..|..|.++. ...-+-+.-+-+.. +...+. ++.|+=..+|+..
T Consensus 38 GNGRTydHLRe~~p~--R~I~vfDR~l~~hp~~~P~~--~~~ilGdi~~tl~~-~~~~g~---~a~laHaD~G~g~ 105 (160)
T PF12692_consen 38 GNGRTYDHLREIFPD--RRIYVFDRALACHPSSTPPE--EDLILGDIRETLPA-LARFGA---GAALAHADIGTGD 105 (160)
T ss_dssp TTSHHHHHHHHH--S--S-EEEEESS--S-GGG---G--GGEEES-HHHHHHH-HHHH-S----EEEEEE----S-
T ss_pred CCCccHHHHHHhCCC--CeEEEEeeecccCCCCCCch--HheeeccHHHHhHH-HHhcCC---ceEEEEeecCCCC
Confidence 567789998888876 69999995 4555555554 23333333333444 666664 7888888998854
No 401
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=31.11 E-value=1e+02 Score=24.26 Aligned_cols=34 Identities=15% Similarity=0.040 Sum_probs=28.8
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeC
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D 43 (271)
..|+++-|-|.+..+=--++++|..+||+|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 5788888999888887778899988899988776
No 402
>TIGR03586 PseI pseudaminic acid synthase.
Probab=30.82 E-value=3.1e+02 Score=22.71 Aligned_cols=88 Identities=10% Similarity=-0.031 Sum_probs=52.6
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
.+.||++-=|+ ++-..|...++.+.+.|. +|+... .-|..+......++. .|..+-+..++ ++.+..
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~~nL~----~i~~lk~~f~~---pVG~SD 200 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLEDANLR----TIPDLAERFNV---PVGLSD 200 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCcccCCHH----HHHHHHHHhCC---CEEeeC
Confidence 46788888888 588889999999987776 455544 123323221223322 22233334454 677889
Q ss_pred eChhhHHHHHHHHhhccccce
Q 045862 87 HDSGTYMACFLCLFRANRIKA 107 (271)
Q Consensus 87 hS~Gg~ia~~~a~~~p~~v~~ 107 (271)
|+.|-.+++...+.-..-|.+
T Consensus 201 Ht~G~~~~~aAva~GA~iIEk 221 (327)
T TIGR03586 201 HTLGILAPVAAVALGACVIEK 221 (327)
T ss_pred CCCchHHHHHHHHcCCCEEEe
Confidence 999976666555543333333
No 403
>PRK11460 putative hydrolase; Provisional
Probab=30.78 E-value=1.8e+02 Score=22.44 Aligned_cols=40 Identities=15% Similarity=0.003 Sum_probs=25.9
Q ss_pred CceEEEEeccCCCccc---hHHHHHHHhhCCCeEEeeCCCCCC
Q 045862 9 GPEILFLYVFPELRYS---WCHQTIALASLSYRAVAPDLSGFG 48 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~---~~~~~~~l~~~g~~vi~~D~~G~G 48 (271)
.++|+++||--...-- -..+.+.|.+.|.++-...++|.|
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 4689999998765433 345567777767665555555544
No 404
>PRK06849 hypothetical protein; Provisional
Probab=30.64 E-value=1.7e+02 Score=24.62 Aligned_cols=73 Identities=5% Similarity=-0.030 Sum_probs=44.5
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCC---Ccc-----cCcchHHhHHHHHHHHHHHhCCCCCc
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDE---LLE-----MTSYTCFHVIGDLIGLIDLVAPNDEK 81 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~---~~~-----~~~~~~~~~~~~l~~~l~~l~~~~~~ 81 (271)
.+||++ | ++...-..+++.|.+.|++|++.|......+.. ... ....+.+.+.+.|.++++..++ .
T Consensus 5 ~~VLI~-G--~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~i---d 78 (389)
T PRK06849 5 KTVLIT-G--ARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENI---D 78 (389)
T ss_pred CEEEEe-C--CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCC---C
Confidence 456665 3 333345577888999999999999875432211 000 0123456788889898888776 3
Q ss_pred eEEEEeC
Q 045862 82 MFVVGHD 88 (271)
Q Consensus 82 ~~lvGhS 88 (271)
+++-+.+
T Consensus 79 ~vIP~~e 85 (389)
T PRK06849 79 LLIPTCE 85 (389)
T ss_pred EEEECCh
Confidence 4444444
No 405
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=30.60 E-value=2e+02 Score=22.58 Aligned_cols=72 Identities=7% Similarity=-0.081 Sum_probs=42.2
Q ss_pred EEEEeccCCCccchHHHHHHHhh--CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 12 ILFLYVFPELRYSWCHQTIALAS--LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~--~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
+++..-...+.......+..+.. .+..++.+|+.+.=.+..........+...+..+..+...+++ +++++.
T Consensus 104 l~i~~~~~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i---~vi~~s 177 (259)
T PF03796_consen 104 LYIEDTPSLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNI---PVIALS 177 (259)
T ss_dssp EEEEESSS-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTS---EEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCC---eEEEcc
Confidence 44443333344455555655544 3678999998765433322222334577788888888888887 454444
No 406
>PF13728 TraF: F plasmid transfer operon protein
Probab=30.58 E-value=1.1e+02 Score=23.45 Aligned_cols=44 Identities=9% Similarity=-0.087 Sum_probs=34.4
Q ss_pred eEEEEeccCCCccchHHHHHHHhhC-CCeEEeeCCCCCCCCCCCc
Q 045862 11 EILFLYVFPELRYSWCHQTIALASL-SYRAVAPDLSGFGDTDELL 54 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~~G~G~S~~~~ 54 (271)
-++|.-|-+.-+....+++..|+++ |+.|+.++.-|.+...-+.
T Consensus 124 L~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~ 168 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPN 168 (215)
T ss_pred EEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCC
Confidence 4666667777777788999999876 9999999999988765443
No 407
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.43 E-value=2.8e+02 Score=22.12 Aligned_cols=74 Identities=16% Similarity=0.112 Sum_probs=45.5
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHh-CCCCCceEE-E
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLV-APNDEKMFV-V 85 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~~~l-v 85 (271)
.+.||++=-|..++.+.|...++.+...|-.=+.+-.||. +.. ..|.....--.....++.. ++ ++.+ .
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~--~t~----~~Y~~~~vdl~~i~~lk~~~~~---pV~~D~ 203 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI--RTF----ETYTRNTLDLAAVAVIKELSHL---PIIVDP 203 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC--CCC----CCCCHHHHHHHHHHHHHhccCC---CEEEeC
Confidence 4679999999999999999999999877653334445553 111 1233222222222333332 44 6777 7
Q ss_pred EeChh
Q 045862 86 GHDSG 90 (271)
Q Consensus 86 GhS~G 90 (271)
.||.|
T Consensus 204 sHs~G 208 (266)
T PRK13398 204 SHATG 208 (266)
T ss_pred CCccc
Confidence 99998
No 408
>PLN03093 Protein SENSITIVITY TO RED LIGHT REDUCED 1; Provisional
Probab=30.36 E-value=1.2e+02 Score=24.20 Aligned_cols=14 Identities=14% Similarity=0.323 Sum_probs=10.6
Q ss_pred CceEEEEeChhhHH
Q 045862 80 EKMFVVGHDSGTYM 93 (271)
Q Consensus 80 ~~~~lvGhS~Gg~i 93 (271)
.+++|+|+|++.+.
T Consensus 198 ~~ivliGNSFe~y~ 211 (273)
T PLN03093 198 NHIALFGNSFEMYE 211 (273)
T ss_pred CCEEEEeCCHHHHH
Confidence 57888888888654
No 409
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=30.14 E-value=31 Score=18.58 Aligned_cols=13 Identities=31% Similarity=0.529 Sum_probs=10.4
Q ss_pred eEEeeCCCCCCCC
Q 045862 38 RAVAPDLSGFGDT 50 (271)
Q Consensus 38 ~vi~~D~~G~G~S 50 (271)
.+-+-||||+|.-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 5678899999963
No 410
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=30.10 E-value=58 Score=23.61 Aligned_cols=21 Identities=24% Similarity=0.278 Sum_probs=17.1
Q ss_pred CceEEEEeChhhHHHHHHHHh
Q 045862 80 EKMFVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~ 100 (271)
..-.+.|-|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 456799999999999887775
No 411
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=30.01 E-value=1.1e+02 Score=26.78 Aligned_cols=78 Identities=14% Similarity=0.212 Sum_probs=53.2
Q ss_pred ceEEEEeccCC-CccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcc-----c------------------CcchHHhHH
Q 045862 10 PEILFLYVFPE-LRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLE-----M------------------TSYTCFHVI 65 (271)
Q Consensus 10 ~~vlllHG~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~-----~------------------~~~~~~~~~ 65 (271)
...+.+-|+.- ....-+++.+.|.+.+.+.+.+++++.|.-..... + ...+-++.-
T Consensus 97 qKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIE 176 (831)
T PRK15180 97 QKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIE 176 (831)
T ss_pred eeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHH
Confidence 34566777654 33446778889998888888999999886643110 0 012344555
Q ss_pred HHHHHHHHHhCCCCCceEEEEeCh
Q 045862 66 GDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
+|+.++...+|. ++|.+|-|.-
T Consensus 177 eDmmeIVqLLGk--~rVvfVTHVN 198 (831)
T PRK15180 177 QDMMEIVQLLGR--DRVMFMTHVD 198 (831)
T ss_pred HHHHHHHHHhCC--CcEEEEEeec
Confidence 777888888888 8999999863
No 412
>PRK07877 hypothetical protein; Provisional
Probab=29.96 E-value=93 Score=28.91 Aligned_cols=33 Identities=21% Similarity=0.074 Sum_probs=27.1
Q ss_pred CceEEEEeChhhHHHHHHHHhhcccc-ceEEEeecCC
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRI-KALVNLSVVF 115 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v-~~lvl~~~~~ 115 (271)
.+|.++|-+.|+.++..+|.. .| ..+++++.-.
T Consensus 108 ~~V~IvG~GlGs~~a~~Lara---GvvG~l~lvD~D~ 141 (722)
T PRK07877 108 LRIGVVGLSVGHAIAHTLAAE---GLCGELRLADFDT 141 (722)
T ss_pred CCEEEEEecHHHHHHHHHHHc---cCCCeEEEEcCCE
Confidence 689999999999999888864 44 8899988643
No 413
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=29.68 E-value=82 Score=25.96 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=25.9
Q ss_pred CceEEEEec-cCCC-----ccchHHHHHHHhhCCCeEEeeC
Q 045862 9 GPEILFLYV-FPEL-----RYSWCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 9 ~~~vlllHG-~~~~-----~~~~~~~~~~l~~~g~~vi~~D 43 (271)
+|.|++.|| ..+. .+.|..+++.|.++|++|+.+=
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 478899999 3323 3457889999999887887753
No 414
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=29.64 E-value=1.2e+02 Score=25.24 Aligned_cols=86 Identities=12% Similarity=0.040 Sum_probs=56.6
Q ss_pred eEEEEeccCCC-------ccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceE
Q 045862 11 EILFLYVFPEL-------RYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMF 83 (271)
Q Consensus 11 ~vlllHG~~~~-------~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 83 (271)
.++++|+-.-+ .+.|..+...+.++ -.+-.+|.-..|..+... +.-+..++-+++. + .-+
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~-------d~DA~avR~F~~~-g----~~~ 265 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDL-------DKDAQAVRLFVED-G----HEI 265 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCc-------hhhHHHHHHHHHc-C----Cce
Confidence 58999976543 44799999888886 567778888777665443 3334444444442 2 235
Q ss_pred EEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 84 VVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 84 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
++..|+.=.+++ |.+||.++-+++..
T Consensus 266 ~laQSyAKNMGL-----YgERvGa~svvc~~ 291 (427)
T KOG1411|consen 266 LLAQSYAKNMGL-----YGERVGALSVVCKD 291 (427)
T ss_pred Eeehhhhhhcch-----hhhccceeEEEecC
Confidence 677777665554 67899988777743
No 415
>PRK00889 adenylylsulfate kinase; Provisional
Probab=29.60 E-value=1.3e+02 Score=21.89 Aligned_cols=35 Identities=9% Similarity=-0.071 Sum_probs=25.2
Q ss_pred ceEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCC
Q 045862 10 PEILFLYVFPELRYS--WCHQTIALASLSYRAVAPDL 44 (271)
Q Consensus 10 ~~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~ 44 (271)
..++.+.|.+++..+ -..+...|...|+.++.+|-
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 458888899887765 35566777766778887764
No 416
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.50 E-value=1.1e+02 Score=21.80 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=16.2
Q ss_pred CceEEEEeChhhHHHHHHH
Q 045862 80 EKMFVVGHDSGTYMACFLC 98 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a 98 (271)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3457889999999999888
No 417
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=29.18 E-value=59 Score=26.89 Aligned_cols=18 Identities=22% Similarity=0.244 Sum_probs=14.9
Q ss_pred eEEEEeChhhHHHHHHHH
Q 045862 82 MFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 82 ~~lvGhS~Gg~ia~~~a~ 99 (271)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 357999999998887774
No 418
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=29.13 E-value=1.7e+02 Score=19.16 Aligned_cols=60 Identities=10% Similarity=0.025 Sum_probs=34.0
Q ss_pred ccchHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 22 RYSWCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 22 ~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
...-...++.+++.|. ..+.++++|.- |..+..++.++-.+....++..+. ++.+++|-=
T Consensus 13 ~eNvGkaiN~mad~GiTGFfl~eYrGvs----Pd~wkgf~~~EDpE~aik~i~D~s---~~AVlI~tV 73 (110)
T COG4075 13 EENVGKAINIMADAGITGFFLHEYRGVS----PDKWKGFSKEEDPESAIKAIRDLS---DKAVLIGTV 73 (110)
T ss_pred HHHHHHHHHHHHhcCcceEEEEEecCcC----hhHhcCcccccCHHHHHHHHHHhh---hceEEEEEe
Confidence 3445667788888765 36788888753 222345666543333334444333 456666643
No 419
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=29.07 E-value=1.6e+02 Score=21.47 Aligned_cols=31 Identities=13% Similarity=0.071 Sum_probs=20.9
Q ss_pred EEEeccCCCccchHHHHHHHhhCCCeEEeeC
Q 045862 13 LFLYVFPELRYSWCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 13 lllHG~~~~~~~~~~~~~~l~~~g~~vi~~D 43 (271)
|++-|.|.+...-..+...|..-|..+..+.
T Consensus 36 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 66 (179)
T cd05005 36 IFVYGAGRSGLVAKAFAMRLMHLGLNVYVVG 66 (179)
T ss_pred EEEEecChhHHHHHHHHHHHHhCCCeEEEeC
Confidence 6666888776555566666666577777764
No 420
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=28.96 E-value=1e+02 Score=19.05 Aligned_cols=31 Identities=16% Similarity=0.033 Sum_probs=21.0
Q ss_pred EEEeccCCCccc--hHHHHHHHhhCCCeEEeeC
Q 045862 13 LFLYVFPELRYS--WCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 13 lllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D 43 (271)
+++-|.++.... -..++..|++.|++|+.+|
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 344455554443 3567788888899999999
No 421
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=28.94 E-value=58 Score=35.05 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCCCCceEEEEeChhhHHHHHHHH
Q 045862 67 DLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 67 ~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~ 99 (271)
.+..+++.+|+ .+-.++|||+|=+.|+.+|.
T Consensus 663 Al~~lL~~~Gi--~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 663 GQYKLFTQAGF--KADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHHcCC--ccceeecCCHHHHHHHHHhC
Confidence 34456677899 88999999999998887663
No 422
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=28.93 E-value=2.9e+02 Score=21.77 Aligned_cols=38 Identities=11% Similarity=0.008 Sum_probs=24.7
Q ss_pred CCceEEEEeccCCCccc-hHHHHHHHhhCCC-eEEeeCCC
Q 045862 8 QGPEILFLYVFPELRYS-WCHQTIALASLSY-RAVAPDLS 45 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~-~~~~~~~l~~~g~-~vi~~D~~ 45 (271)
+.+.|++|+-.+..... .....+.|++.|+ .|-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 45789999966654433 4555667777777 45666664
No 423
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=28.62 E-value=33 Score=27.09 Aligned_cols=13 Identities=23% Similarity=0.662 Sum_probs=11.4
Q ss_pred CceEEEEeChhhH
Q 045862 80 EKMFVVGHDSGTY 92 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ 92 (271)
..++++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 6799999999974
No 424
>COG2513 PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
Probab=28.56 E-value=98 Score=24.90 Aligned_cols=87 Identities=17% Similarity=0.140 Sum_probs=55.6
Q ss_pred chHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEE-EEeChhhHHHHHHHHh-
Q 045862 24 SWCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFV-VGHDSGTYMACFLCLF- 100 (271)
Q Consensus 24 ~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~l-vGhS~Gg~ia~~~a~~- 100 (271)
.|......+.+ .||..+...--|.-.|-..++....++++++.++..+.+...+ |+.+ +=.-+|. ++..+..
T Consensus 25 ~~d~~sA~la~~aGF~al~~sg~~vA~slG~pD~~~~t~~e~~~~vrrI~~a~~l---Pv~vD~dtGfG~--~~nvartV 99 (289)
T COG2513 25 AWDAGSALLAERAGFKALYLSGAGVAASLGLPDLGITTLDEVLADARRITDAVDL---PVLVDIDTGFGE--ALNVARTV 99 (289)
T ss_pred CcCHHHHHHHHHcCCeEEEeccHHHHHhcCCCccccccHHHHHHHHHHHHhhcCC---ceEEeccCCCCc--HHHHHHHH
Confidence 46666666655 4999998875555455455554566899999999999998887 4544 3455666 3333322
Q ss_pred ---hccccceEEEeecCC
Q 045862 101 ---RANRIKALVNLSVVF 115 (271)
Q Consensus 101 ---~p~~v~~lvl~~~~~ 115 (271)
..-.+.++-+-+...
T Consensus 100 ~~~~~aG~agi~iEDq~~ 117 (289)
T COG2513 100 RELEQAGAAGIHIEDQVG 117 (289)
T ss_pred HHHHHcCcceeeeeeccc
Confidence 223466666666544
No 425
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=28.33 E-value=1.8e+02 Score=21.71 Aligned_cols=63 Identities=13% Similarity=-0.068 Sum_probs=31.3
Q ss_pred EEEeccCCCccch--HHHHHHHhh----CCCeEEeeCCCCCCCCCCCc--cc----CcchHHhHHHHHHHHHHHh
Q 045862 13 LFLYVFPELRYSW--CHQTIALAS----LSYRAVAPDLSGFGDTDELL--EM----TSYTCFHVIGDLIGLIDLV 75 (271)
Q Consensus 13 lllHG~~~~~~~~--~~~~~~l~~----~g~~vi~~D~~G~G~S~~~~--~~----~~~~~~~~~~~l~~~l~~l 75 (271)
++|-|..+++.+. ..++..+.. ...+++.+|..|.+...... .. ...+.++..+.+..+.+..
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~em 115 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVEEM 115 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHHHH
Confidence 4555766666542 345555554 46899999998765443221 00 1234555555555544443
No 426
>cd00431 cysteine_hydrolases Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.
Probab=28.18 E-value=1.6e+02 Score=20.83 Aligned_cols=48 Identities=13% Similarity=0.005 Sum_probs=35.3
Q ss_pred HHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 66 GDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
..+..+|+..++ +.++|+|.+.-..|..-+....-....-.|+-++..
T Consensus 99 t~l~~~L~~~~i--~~vil~G~~t~~CV~~T~~~a~~~G~~v~vi~Da~~ 146 (161)
T cd00431 99 TDLDELLRERGI--DTLVVCGIATDICVLATARDALDLGYRVIVVEDACA 146 (161)
T ss_pred CCHHHHHHHCCC--CEEEEEecCcChhHHHHHHHHHHCCCEEEEehhhcc
Confidence 367788888899 899999999998887766555544555566666544
No 427
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=28.16 E-value=1.3e+02 Score=21.84 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=31.6
Q ss_pred eEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCCCCCC
Q 045862 11 EILFLYVFPELRYS--WCHQTIALASLSYRAVAPDLSGFG 48 (271)
Q Consensus 11 ~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~G 48 (271)
+|+=+=|+-.++.. ...+++.|..+||+|-++=..+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 56667787766643 789999999999999999999998
No 428
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=28.06 E-value=1.3e+02 Score=22.68 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=29.2
Q ss_pred HHHHhCCCCCceEEEEe-ChhhHHHHHHHHhhccccceEEEeecC
Q 045862 71 LIDLVAPNDEKMFVVGH-DSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 71 ~l~~l~~~~~~~~lvGh-S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
..+.+.. .++.++|- .+|+.++..++.. .|..+++++.-
T Consensus 15 ~q~~L~~--~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 15 IVQKLEQ--ATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHhC--CcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 3455555 78888884 5788888888764 58889999976
No 429
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=28.01 E-value=1.9e+02 Score=21.17 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=36.9
Q ss_pred HHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 66 GDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
.++..+++..++ +.++|+|-+.-..|-.-+...+....+-.++.++..
T Consensus 103 t~L~~~L~~~gi--~~vvi~G~~t~~CV~~Ta~~A~~~Gy~v~vv~Da~a 150 (179)
T cd01015 103 TSLAATLTARGV--DTLIVAGCSTSGCIRATAVDAMQHGFRPIVVRECVG 150 (179)
T ss_pred CcHHHHHHHcCC--CEEEEeeecccHhHHHHHHHHHHCCCeEEEeecccc
Confidence 478888999999 999999999988876655555555566677777654
No 430
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=27.94 E-value=3.3e+02 Score=22.03 Aligned_cols=36 Identities=6% Similarity=-0.030 Sum_probs=24.1
Q ss_pred EEEEecc--CCCccchHHHHHHHhhCCCeEEeeCCCCC
Q 045862 12 ILFLYVF--PELRYSWCHQTIALASLSYRAVAPDLSGF 47 (271)
Q Consensus 12 vlllHG~--~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 47 (271)
+++++|+ |+.......+++.|.++|++|..+...+.
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 40 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGE 40 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCC
Confidence 4445554 34444566788999888999988876543
No 431
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=27.85 E-value=1.2e+02 Score=24.71 Aligned_cols=17 Identities=29% Similarity=0.661 Sum_probs=15.3
Q ss_pred EEEEeChhhHHHHHHHH
Q 045862 83 FVVGHDSGTYMACFLCL 99 (271)
Q Consensus 83 ~lvGhS~Gg~ia~~~a~ 99 (271)
.++|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999999886
No 432
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=27.77 E-value=3.4e+02 Score=22.89 Aligned_cols=72 Identities=7% Similarity=-0.088 Sum_probs=46.5
Q ss_pred EEEEeccCCCccchHHHHHHHhhCC--CeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 12 ILFLYVFPELRYSWCHQTIALASLS--YRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~g--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
.+++.|+..+......+++.+.... .++|-+.. .+.+... -.-.+..+.+..++...|+ -+.+..|.
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~--~~~~~~~-----~ps~e~i~~F~~~L~~~Gi----~vtvR~~~ 351 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNS--IVNIKFE-----PVCSSTRERFRDRLLDAGL----QVTVRKSY 351 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeecc--CCCCCCC-----CCCHHHHHHHHHHHHHCCC----cEEeeCCC
Confidence 6889999988888888888887642 34444443 2222111 1223456666777777777 56778899
Q ss_pred hhHHH
Q 045862 90 GTYMA 94 (271)
Q Consensus 90 Gg~ia 94 (271)
|.-|.
T Consensus 352 G~di~ 356 (368)
T PRK14456 352 GTTIN 356 (368)
T ss_pred Ccchh
Confidence 87554
No 433
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=27.61 E-value=2.7e+02 Score=21.03 Aligned_cols=32 Identities=9% Similarity=-0.083 Sum_probs=23.6
Q ss_pred EEEeccCCCccchHHHHHHHhhCCCeEEeeCCCC
Q 045862 13 LFLYVFPELRYSWCHQTIALASLSYRAVAPDLSG 46 (271)
Q Consensus 13 lllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 46 (271)
++|-| +++..-..++..|.++|++|+..+...
T Consensus 8 ~lVtG--as~~iG~~ia~~l~~~G~~v~~~~r~~ 39 (235)
T PRK06550 8 VLITG--AASGIGLAQARAFLAQGAQVYGVDKQD 39 (235)
T ss_pred EEEcC--CCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 44444 455667788899988899999998653
No 434
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=27.53 E-value=1.5e+02 Score=20.82 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=28.7
Q ss_pred ceEEEEeccCC----CccchHHHHHHHhhCCC---eEEeeCCCC
Q 045862 10 PEILFLYVFPE----LRYSWCHQTIALASLSY---RAVAPDLSG 46 (271)
Q Consensus 10 ~~vlllHG~~~----~~~~~~~~~~~l~~~g~---~vi~~D~~G 46 (271)
-.||+-|+.++ ....+..+++.|...|| +++.++..|
T Consensus 18 vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 18 VVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred EEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 47888888875 45568889999999887 577777765
No 435
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=27.52 E-value=71 Score=23.84 Aligned_cols=27 Identities=11% Similarity=-0.053 Sum_probs=17.8
Q ss_pred HHhHHHHHHHHHHHhCCCCCceEEEEeCh
Q 045862 61 CFHVIGDLIGLIDLVAPNDEKMFVVGHDS 89 (271)
Q Consensus 61 ~~~~~~~l~~~l~~l~~~~~~~~lvGhS~ 89 (271)
++.++.-+..+++..++ .+-.++||+-
T Consensus 132 ~~aL~~L~~~L~~~y~i--~~~~IvGH~d 158 (185)
T PRK11789 132 YQALAALTRALRAAYPI--IAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHcCC--CHHhEEehhh
Confidence 34455555666666677 5578999974
No 436
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=27.51 E-value=2.7e+02 Score=23.98 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=32.0
Q ss_pred CceEEEEeccCCC---ccchHHHHHHHhhC--CCeEEeeCCCCCCCC
Q 045862 9 GPEILFLYVFPEL---RYSWCHQTIALASL--SYRAVAPDLSGFGDT 50 (271)
Q Consensus 9 ~~~vlllHG~~~~---~~~~~~~~~~l~~~--g~~vi~~D~~G~G~S 50 (271)
.|.+|+|...+.+ .++...+++.+.++ |..|+.+.-+|+..|
T Consensus 97 ~P~~I~V~tTC~~e~IGDDi~~v~~e~~~~~~~~pvv~v~t~Gf~g~ 143 (427)
T PRK02842 97 NISVLFLVGSCPSEVIKLDLEGLAERLSTEFAGVPVLNYSGSGLETT 143 (427)
T ss_pred CCCEEEEECCChHHhhcCCHHHHHHHhhcccCCCeEEEeeCCCcccc
Confidence 5778888887754 45688888888776 678999999988543
No 437
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=27.40 E-value=3.5e+02 Score=22.21 Aligned_cols=34 Identities=6% Similarity=-0.192 Sum_probs=24.4
Q ss_pred EEEeccCCCccchHHHHHHHhhCCCeEEeeCCCC
Q 045862 13 LFLYVFPELRYSWCHQTIALASLSYRAVAPDLSG 46 (271)
Q Consensus 13 lllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 46 (271)
+...|.++.-..+..++..|.++||.|.++-..+
T Consensus 6 i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 6 LAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 3335666666666788999999899988875543
No 438
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.25 E-value=51 Score=27.38 Aligned_cols=18 Identities=33% Similarity=0.547 Sum_probs=16.0
Q ss_pred EEEEeChhhHHHHHHHHh
Q 045862 83 FVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 83 ~lvGhS~Gg~ia~~~a~~ 100 (271)
.+.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 689999999999999864
No 439
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=27.24 E-value=2.5e+02 Score=23.12 Aligned_cols=60 Identities=8% Similarity=-0.048 Sum_probs=40.5
Q ss_pred HHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhh-HHHHHHHHhh
Q 045862 30 IALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGT-YMACFLCLFR 101 (271)
Q Consensus 30 ~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg-~ia~~~a~~~ 101 (271)
+.+...|- +|+..|.+. ..|+.+.+++.+.++++.... ..++|+|+|.=| -++-.+|.+.
T Consensus 42 ~~~~~~Gad~V~~~~~~~----------~~~~~e~~~~al~~~i~~~~p--~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 42 AQAIQLGANHVWKLSGKP----------DDRMIEDYAGVMADTIRQHGA--DGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHhcCCCEEEEecCcc----------cccChHHHHHHHHHHHHhhCC--CcEEEEcCCccHHHHHHHHHHHh
Confidence 33433343 677777642 237778899999999887654 358999988755 6666777664
No 440
>PRK09072 short chain dehydrogenase; Provisional
Probab=27.24 E-value=1.2e+02 Score=23.56 Aligned_cols=31 Identities=16% Similarity=-0.096 Sum_probs=23.0
Q ss_pred EEEeccCCCccchHHHHHHHhhCCCeEEeeCCC
Q 045862 13 LFLYVFPELRYSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 13 lllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
++|.| +++..-..++..|.++|++|++.+..
T Consensus 8 vlItG--~s~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 8 VLLTG--ASGGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEC--CCchHHHHHHHHHHHCCCEEEEEECC
Confidence 45544 44566678888888889999999864
No 441
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=27.24 E-value=59 Score=25.85 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=27.6
Q ss_pred HHHHHHHHhCCCCCce-EEEEeChhhHHHHHHHHhhccccceEE
Q 045862 67 DLIGLIDLVAPNDEKM-FVVGHDSGTYMACFLCLFRANRIKALV 109 (271)
Q Consensus 67 ~l~~~l~~l~~~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lv 109 (271)
-|.++++.-.. ++ .++|.|+|+.-+..+.+..+.+-.+++
T Consensus 29 VLD~fl~a~~~---~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 29 VLDEFLRANFN---PFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHHHhccC---CcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 34455544433 44 478999999999999988887655444
No 442
>PRK04148 hypothetical protein; Provisional
Probab=27.11 E-value=1.2e+02 Score=21.24 Aligned_cols=30 Identities=13% Similarity=-0.016 Sum_probs=21.7
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEEEeec
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALVNLSV 113 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 113 (271)
.++..||-..|..+|..++..- .-++.++-
T Consensus 18 ~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 4689999998888888888532 34666663
No 443
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=26.87 E-value=79 Score=24.41 Aligned_cols=35 Identities=20% Similarity=0.080 Sum_probs=21.1
Q ss_pred CceEEEEeccCCCccc-----hHHHHHHHhhCCCeEEeeC
Q 045862 9 GPEILFLYVFPELRYS-----WCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~-----~~~~~~~l~~~g~~vi~~D 43 (271)
++.|++.+|....... |..+++.|.+.+++|+.+=
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 4678888887764444 6678888988877777543
No 444
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=26.78 E-value=1e+02 Score=27.06 Aligned_cols=39 Identities=8% Similarity=-0.098 Sum_probs=32.7
Q ss_pred CCceEEEEeccCCCcc--chHHHHHHHhhCCCeEEeeCCCC
Q 045862 8 QGPEILFLYVFPELRY--SWCHQTIALASLSYRAVAPDLSG 46 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G 46 (271)
..|.||++-|+-+++. ....+...|..+|++|+++..|.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 3588999999987665 47899999999999999998874
No 445
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=26.74 E-value=3.3e+02 Score=22.51 Aligned_cols=77 Identities=13% Similarity=0.086 Sum_probs=42.7
Q ss_pred EEEeccCCCccchHHHHHHHhhCC--CeEEeeCCCCCCCCCCCc--------------ccCcchHHhHHHHHHHHHHHhC
Q 045862 13 LFLYVFPELRYSWCHQTIALASLS--YRAVAPDLSGFGDTDELL--------------EMTSYTCFHVIGDLIGLIDLVA 76 (271)
Q Consensus 13 lllHG~~~~~~~~~~~~~~l~~~g--~~vi~~D~~G~G~S~~~~--------------~~~~~~~~~~~~~l~~~l~~l~ 76 (271)
||++|+|+=......+++.+-... +.|++++ ||-.+-... ....-+..+.++.+...++...
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvn--Gy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVN--GYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEE--ccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 677888887777777776655532 5677776 332110000 0012234445555555554443
Q ss_pred -CCCCceEEEEeChhhHH
Q 045862 77 -PNDEKMFVVGHDSGTYM 93 (271)
Q Consensus 77 -~~~~~~~lvGhS~Gg~i 93 (271)
. .+++|+=|++=|..
T Consensus 135 ~~--~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 135 SP--PPLYLVIHNIDGPS 150 (326)
T ss_pred CC--CceEEEEECCCChh
Confidence 2 57888888877655
No 446
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=26.43 E-value=1.1e+02 Score=18.70 Aligned_cols=10 Identities=10% Similarity=0.268 Sum_probs=6.9
Q ss_pred ceEEEEeccC
Q 045862 10 PEILFLYVFP 19 (271)
Q Consensus 10 ~~vlllHG~~ 19 (271)
|.++++||..
T Consensus 32 ~~~~lvhGga 41 (71)
T PF10686_consen 32 PDMVLVHGGA 41 (71)
T ss_pred CCEEEEECCC
Confidence 5677777765
No 447
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=26.23 E-value=1.5e+02 Score=24.81 Aligned_cols=59 Identities=7% Similarity=0.003 Sum_probs=36.0
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCC
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAP 77 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~ 77 (271)
.|+.+.|.-.|+- .+..|.++||.|+.+-+.-+..... ...+.++-..|...+.+.+|+
T Consensus 6 V~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 6 VLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred EEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHHHhCC
Confidence 4555555443332 1344677899999999887664111 234445566677777788877
No 448
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.16 E-value=1e+02 Score=22.86 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHH
Q 045862 64 VIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFL 97 (271)
Q Consensus 64 ~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~ 97 (271)
....++..+.+|+. +.++++|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v--~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKV--KHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCC--CEEEEecCCCchHHHHHH
Confidence 55677778889999 899999999877666544
No 449
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.11 E-value=68 Score=21.86 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=18.9
Q ss_pred chHHHHHHHhhCCCeEEeeCCC
Q 045862 24 SWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
-|..+++.|+++|+.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 3667889999999999999964
No 450
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=26.07 E-value=1.2e+02 Score=23.80 Aligned_cols=48 Identities=6% Similarity=0.063 Sum_probs=26.6
Q ss_pred CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChh
Q 045862 36 SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSG 90 (271)
Q Consensus 36 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~G 90 (271)
|..+..+|.||++.+.... ..-+.....+..+++..+. .++|+-..+.
T Consensus 78 g~~i~vIDTPGl~~~~~~~----~~~~~~~~~I~~~l~~~~i---dvIL~V~rlD 125 (249)
T cd01853 78 GFKLNIIDTPGLLESVMDQ----RVNRKILSSIKRYLKKKTP---DVVLYVDRLD 125 (249)
T ss_pred CeEEEEEECCCcCcchhhH----HHHHHHHHHHHHHHhccCC---CEEEEEEcCC
Confidence 5678999999999774211 2223333344444443343 4556555444
No 451
>PRK06696 uridine kinase; Validated
Probab=26.01 E-value=1.7e+02 Score=22.41 Aligned_cols=37 Identities=3% Similarity=-0.159 Sum_probs=27.6
Q ss_pred CCCceEEEEeccCCCccch--HHHHHHHhhCCCeEEeeC
Q 045862 7 GQGPEILFLYVFPELRYSW--CHQTIALASLSYRAVAPD 43 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~~--~~~~~~l~~~g~~vi~~D 43 (271)
+++|.||.|-|.++++.+. ..+...|...|..|+.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 3468999999999887664 466677776677777744
No 452
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=25.85 E-value=1.8e+02 Score=20.21 Aligned_cols=24 Identities=17% Similarity=0.303 Sum_probs=19.3
Q ss_pred CceEEEEeChhhHHHHHHHHhhcc
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRAN 103 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~ 103 (271)
++++++|..-.+.++.+++.+...
T Consensus 36 g~i~~~G~G~S~~~a~~~~~~~~~ 59 (138)
T PF13580_consen 36 GRIFVCGNGHSAAIASHFAADLGG 59 (138)
T ss_dssp --EEEEESTHHHHHHHHHHHHHHC
T ss_pred CEEEEEcCchhhhHHHHHHHHHhc
Confidence 689999999888999999988653
No 453
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=25.72 E-value=3.8e+02 Score=22.03 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=47.3
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhC-CCeEEeeCC----CCCC-CCCCCc----------------ccCcchHHhHHH
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASL-SYRAVAPDL----SGFG-DTDELL----------------EMTSYTCFHVIG 66 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~----~G~G-~S~~~~----------------~~~~~~~~~~~~ 66 (271)
.+.+++|-|-.+++.+-.. -.|+++ |-.||..|- +|.. .|.+++ ....||..++..
T Consensus 2 ~~~~i~I~GPTAsGKT~la--i~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 2 KPKLIVIAGPTASGKTALA--IALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred CccEEEEECCCCcCHHHHH--HHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 3567888887777765443 335443 567888883 4432 122221 113678889999
Q ss_pred HHHHHHHHhCCCCCceEEEEeC
Q 045862 67 DLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 67 ~l~~~l~~l~~~~~~~~lvGhS 88 (271)
+....++.....++-.+|||-|
T Consensus 80 ~a~~~i~~i~~rgk~pIlVGGT 101 (308)
T COG0324 80 DALAAIDDILARGKLPILVGGT 101 (308)
T ss_pred HHHHHHHHHHhCCCCcEEEccH
Confidence 9888887764321346777743
No 454
>PRK13768 GTPase; Provisional
Probab=25.72 E-value=3.3e+02 Score=21.40 Aligned_cols=34 Identities=15% Similarity=0.023 Sum_probs=24.5
Q ss_pred eEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCC
Q 045862 11 EILFLYVFPELRYS--WCHQTIALASLSYRAVAPDL 44 (271)
Q Consensus 11 ~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~ 44 (271)
.++++-|.++++.. -..+...|+.+|.+|+.+|+
T Consensus 3 ~~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 3 YIVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 35677787776654 35667778778999988875
No 455
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.71 E-value=1.1e+02 Score=21.69 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHH
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYM 93 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~i 93 (271)
+....+...+..++. +.++++||+-=|.+
T Consensus 41 ~~~~sl~~av~~l~~--~~IiV~gHt~Cg~~ 69 (142)
T cd03379 41 DAIRSLVVSVYLLGT--REIIVIHHTDCGML 69 (142)
T ss_pred hHHHHHHHHHHHhCC--CEEEEEeecCCcce
Confidence 455667777888999 89999999754443
No 456
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=25.55 E-value=1.6e+02 Score=21.31 Aligned_cols=48 Identities=13% Similarity=0.213 Sum_probs=34.1
Q ss_pred CeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHH
Q 045862 37 YRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYM 93 (271)
Q Consensus 37 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~i 93 (271)
-+++++|+-|-= .....+.+.+.|.+++...... +.|.+-=-|-||+|
T Consensus 98 ~r~~VldF~Gdi--------~A~~v~~LReeisail~~a~~~-DeV~~rLES~GG~V 145 (155)
T PF08496_consen 98 PRLFVLDFKGDI--------KASEVESLREEISAILSVATPE-DEVLVRLESPGGMV 145 (155)
T ss_pred CeEEEEecCCCc--------cHHHHHHHHHHHHHHHHhCCCC-CeEEEEEecCCcee
Confidence 689999998732 2234566777777777665543 67888888999876
No 457
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=25.54 E-value=4.5e+02 Score=22.80 Aligned_cols=80 Identities=9% Similarity=0.032 Sum_probs=47.6
Q ss_pred CccchHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEE-EeChhhHHHHHHH
Q 045862 21 LRYSWCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVV-GHDSGTYMACFLC 98 (271)
Q Consensus 21 ~~~~~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lv-GhS~Gg~ia~~~a 98 (271)
+...+...+..+.+ .+++++.+|-+|.... -....+.+..+++.... ..++|+ .-++++.-....+
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~k----------d~~lm~EL~~~lk~~~P--devlLVLsATtk~~d~~~i~ 371 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNYR----------ASETVEEMIETMGQVEP--DYICLTLSASMKSKDMIEII 371 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccCc----------CHHHHHHHHHHHhhcCC--CeEEEEECCccChHHHHHHH
Confidence 33444555555654 3699999999986321 12344555666665544 455555 3346776666777
Q ss_pred Hhhcc-ccceEEEee
Q 045862 99 LFRAN-RIKALVNLS 112 (271)
Q Consensus 99 ~~~p~-~v~~lvl~~ 112 (271)
..+.. .+.++|+.-
T Consensus 372 ~~F~~~~idglI~TK 386 (436)
T PRK11889 372 TNFKDIHIDGIVFTK 386 (436)
T ss_pred HHhcCCCCCEEEEEc
Confidence 66543 578888743
No 458
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=25.53 E-value=1.3e+02 Score=26.53 Aligned_cols=55 Identities=13% Similarity=0.036 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHHHH-HHHH-hhccccceEEEeecCCCC
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMAC-FLCL-FRANRIKALVNLSVVFNP 117 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~-~~a~-~~p~~v~~lvl~~~~~~~ 117 (271)
.....+.+-+...|-+-.++.|+|.|.|+.-.. .+.+ .-...+...|+-++....
T Consensus 201 LAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 201 LALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred HHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCC
Confidence 334566666777765326799999999995443 2221 111246666666655443
No 459
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=25.53 E-value=3.5e+02 Score=21.61 Aligned_cols=67 Identities=10% Similarity=0.125 Sum_probs=36.9
Q ss_pred hCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhC------CCCCceEEEEeChhhHHHHHHHHhhcc--cc
Q 045862 34 SLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVA------PNDEKMFVVGHDSGTYMACFLCLFRAN--RI 105 (271)
Q Consensus 34 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~------~~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v 105 (271)
.++|+++.+|-+|....+ ..+.+.+..+.+... . ..++||--+..|.-++..+..+-+ .+
T Consensus 152 ~~~~D~ViIDT~G~~~~d----------~~~~~el~~~~~~~~~~~~~~~--~~~~LVl~a~~~~~~~~~~~~f~~~~~~ 219 (272)
T TIGR00064 152 ARNIDVVLIDTAGRLQNK----------VNLMDELKKIKRVIKKVDKDAP--DEVLLVLDATTGQNALEQAKVFNEAVGL 219 (272)
T ss_pred HCCCCEEEEeCCCCCcch----------HHHHHHHHHHHHHHhcccCCCC--ceEEEEEECCCCHHHHHHHHHHHhhCCC
Confidence 457999999999876431 233444444444332 3 345555544455444444444332 36
Q ss_pred ceEEEee
Q 045862 106 KALVNLS 112 (271)
Q Consensus 106 ~~lvl~~ 112 (271)
.++|+.-
T Consensus 220 ~g~IlTK 226 (272)
T TIGR00064 220 TGIILTK 226 (272)
T ss_pred CEEEEEc
Confidence 6777655
No 460
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=25.42 E-value=1.4e+02 Score=24.61 Aligned_cols=43 Identities=19% Similarity=0.076 Sum_probs=33.1
Q ss_pred eEEEEecc-------CCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCc
Q 045862 11 EILFLYVF-------PELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELL 54 (271)
Q Consensus 11 ~vlllHG~-------~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~ 54 (271)
.|+++|+- --+.+.|..+++.+..+ ...-.+|..-.|..+.+.
T Consensus 179 si~iLhaCAhNPTGmDPT~EQW~qia~vik~k-~lf~fFDiAYQGfASGD~ 228 (410)
T KOG1412|consen 179 SIIILHACAHNPTGMDPTREQWKQIADVIKSK-NLFPFFDIAYQGFASGDL 228 (410)
T ss_pred cEEeeeccccCCCCCCCCHHHHHHHHHHHHhc-CceeeeehhhcccccCCc
Confidence 57778753 34667899999999887 788888988888776555
No 461
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=25.37 E-value=4.4e+02 Score=22.68 Aligned_cols=38 Identities=11% Similarity=-0.092 Sum_probs=27.7
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGF 47 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~ 47 (271)
+.+-|++||.+.... ...+...+.+.|..|++-++..+
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~ 303 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKV 303 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEecccc
Confidence 367999999887665 34455556677899999977754
No 462
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=25.33 E-value=2.4e+02 Score=22.34 Aligned_cols=85 Identities=11% Similarity=-0.012 Sum_probs=46.9
Q ss_pred EEEEeccCCCccchH-HHHHHHhhCC-------CeEEeeCCCCCCCCCCCcccCcc--hH------HhHHHHHHHHHHHh
Q 045862 12 ILFLYVFPELRYSWC-HQTIALASLS-------YRAVAPDLSGFGDTDELLEMTSY--TC------FHVIGDLIGLIDLV 75 (271)
Q Consensus 12 vlllHG~~~~~~~~~-~~~~~l~~~g-------~~vi~~D~~G~G~S~~~~~~~~~--~~------~~~~~~l~~~l~~l 75 (271)
-+++.|.|...-... .+...+.+.| -+++.+|..|-=..+... ...+ -+ ..-..+|.+.++..
T Consensus 27 riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~-l~~~~~~~~~~~~~~~~~~~L~eav~~~ 105 (254)
T cd00762 27 KVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKE-TCPNEYHLARFANPERESGDLEDAVEAA 105 (254)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCc-cCHHHHHHHHHcCcccccCCHHHHHHhh
Confidence 355667776554433 3334443322 389999999853332221 0010 11 11123577777766
Q ss_pred CCCCCceEEEEeCh-hhHHHHHHHHhh
Q 045862 76 APNDEKMFVVGHDS-GTYMACFLCLFR 101 (271)
Q Consensus 76 ~~~~~~~~lvGhS~-Gg~ia~~~a~~~ 101 (271)
++-+|+|-|- ||.+.-.+....
T Consensus 106 ----kptvlIG~S~~~g~ft~evv~~M 128 (254)
T cd00762 106 ----KPDFLIGVSRVGGAFTPEVIRAX 128 (254)
T ss_pred ----CCCEEEEeCCCCCCCCHHHHHHH
Confidence 4578999999 887666555543
No 463
>cd01013 isochorismatase Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase, catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of a vinyl ether, an uncommon reaction in biological systems. Isochorismatase is part of the phenazine biosynthesis pathway. Phenazines are antimicrobial compounds that provide the competitive advantage for certain bacteria.
Probab=25.19 E-value=2.2e+02 Score=21.40 Aligned_cols=49 Identities=8% Similarity=0.046 Sum_probs=38.6
Q ss_pred HHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCCC
Q 045862 66 GDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVFN 116 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 116 (271)
.++..+|+..++ +.++++|.+.-.+|..-+...+.....-.|+.++...
T Consensus 131 T~L~~~Lr~~gi--~~lii~Gv~T~~CV~~Ta~~A~~~Gy~v~vv~Da~as 179 (203)
T cd01013 131 SPLLERLKESGR--DQLIITGVYAHIGCLSTAVDAFMRDIQPFVVADAIAD 179 (203)
T ss_pred CCHHHHHHHcCC--CEEEEEEeccChhHHHHHHHHHHCCCeEEEeccccCC
Confidence 478888999999 9999999999998877766665555677777776653
No 464
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=25.12 E-value=79 Score=29.03 Aligned_cols=78 Identities=12% Similarity=-0.059 Sum_probs=46.6
Q ss_pred CCceEEEEeccCCC----------ccchHHHHHHHhhCCCeEEeeCCCC---CCCCCCCcccCcchHH----hHHHHHHH
Q 045862 8 QGPEILFLYVFPEL----------RYSWCHQTIALASLSYRAVAPDLSG---FGDTDELLEMTSYTCF----HVIGDLIG 70 (271)
Q Consensus 8 ~~~~vlllHG~~~~----------~~~~~~~~~~l~~~g~~vi~~D~~G---~G~S~~~~~~~~~~~~----~~~~~l~~ 70 (271)
++-+||+-|..... ...|..++++|.++||++|.+|--- .|....+...-..|++ +....+.-
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~P 126 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFP 126 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHH
Confidence 45689999997532 2358889999999999999998321 1222111111112222 23356777
Q ss_pred HHHHhCCCCCceEEEE
Q 045862 71 LIDLVAPNDEKMFVVG 86 (271)
Q Consensus 71 ~l~~l~~~~~~~~lvG 86 (271)
+|++.+.+ -.+.++|
T Consensus 127 ILkkygvp-ATfFlvg 141 (671)
T PRK14582 127 ILQAFQWP-AVWAPVG 141 (671)
T ss_pred HHHHcCCC-EEEEEec
Confidence 88888882 2344555
No 465
>cd04907 ACT_ThrD-I_2 Second of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the second of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.04 E-value=1e+02 Score=19.25 Aligned_cols=39 Identities=13% Similarity=0.073 Sum_probs=21.1
Q ss_pred cccccCCCceEEEEeccCCCccchHHHHHHHhhCCCeEEe
Q 045862 2 HVAEKGQGPEILFLYVFPELRYSWCHQTIALASLSYRAVA 41 (271)
Q Consensus 2 ~y~~~g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~ 41 (271)
+|+..|+...-||+ |.-........+.+.|.+.||.+.-
T Consensus 32 ~YR~~~~~~a~vlv-Gi~~~~~~~~~l~~~l~~~g~~~~d 70 (81)
T cd04907 32 HYRNQGSDYGRVLV-GIQVPDADLDELKERLDALGYPYQE 70 (81)
T ss_pred EEecCCCCceeEEE-EEEeChHHHHHHHHHHHHcCCCeEE
Confidence 56666643222222 2222222677788888887777543
No 466
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.97 E-value=1.2e+02 Score=23.82 Aligned_cols=18 Identities=28% Similarity=0.368 Sum_probs=16.1
Q ss_pred EEEEeChhhHHHHHHHHh
Q 045862 83 FVVGHDSGTYMACFLCLF 100 (271)
Q Consensus 83 ~lvGhS~Gg~ia~~~a~~ 100 (271)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999999875
No 467
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=24.85 E-value=4.6e+02 Score=22.75 Aligned_cols=74 Identities=8% Similarity=0.101 Sum_probs=41.5
Q ss_pred HHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCC-CCceEEEEeChhhH-HHHHHHHhhc-ccc
Q 045862 29 TIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPN-DEKMFVVGHDSGTY-MACFLCLFRA-NRI 105 (271)
Q Consensus 29 ~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~~~lvGhS~Gg~-ia~~~a~~~p-~~v 105 (271)
...+...+++++.+|-+|+...+ ...++.+..+++..+.. .-.++||--+..+. -...++..+. -.+
T Consensus 292 ~~~l~~~~~D~VLIDTaGr~~rd----------~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f~~~~~ 361 (432)
T PRK12724 292 KETLARDGSELILIDTAGYSHRN----------LEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNY 361 (432)
T ss_pred HHHHHhCCCCEEEEeCCCCCccC----------HHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHhcCCCC
Confidence 34444457999999998754221 24566666666655321 02355555555444 5555555553 246
Q ss_pred ceEEEee
Q 045862 106 KALVNLS 112 (271)
Q Consensus 106 ~~lvl~~ 112 (271)
.++|+.-
T Consensus 362 ~glIlTK 368 (432)
T PRK12724 362 RRILLTK 368 (432)
T ss_pred CEEEEEc
Confidence 7777743
No 468
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=24.74 E-value=1.3e+02 Score=26.56 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=28.9
Q ss_pred hHHhHHHHHHHH-HHHhCCCCCceEEEE-eChhhHHHHHHHHhh
Q 045862 60 TCFHVIGDLIGL-IDLVAPNDEKMFVVG-HDSGTYMACFLCLFR 101 (271)
Q Consensus 60 ~~~~~~~~l~~~-l~~l~~~~~~~~lvG-hS~Gg~ia~~~a~~~ 101 (271)
-++++++|+..- +..++. .|-.++| +|-||.+|..++.+.
T Consensus 382 yLe~fa~d~~~~i~~e~~~--~PdlI~GnYsDgnlvA~LLs~~l 423 (550)
T PF00862_consen 382 YLEEFADDAEREILAELQG--KPDLIIGNYSDGNLVASLLSRKL 423 (550)
T ss_dssp GHHHHHHHHHHHHHHHHTS----SEEEEEHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCC--CCcEEEeccCcchHHHHHHHhhc
Confidence 478889888654 466766 6777888 588999999888764
No 469
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=24.73 E-value=2.6e+02 Score=24.11 Aligned_cols=42 Identities=17% Similarity=0.063 Sum_probs=28.2
Q ss_pred HHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecC
Q 045862 68 LIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVV 114 (271)
Q Consensus 68 l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 114 (271)
+.+.+..... +++.++| ||.+++++|...-..-..+.++...
T Consensus 139 l~~~l~~~~~--~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~~ 180 (438)
T PRK13512 139 IDQFIKANQV--DKALVVG---AGYISLEVLENLYERGLHPTLIHRS 180 (438)
T ss_pred HHHHHhhcCC--CEEEEEC---CCHHHHHHHHHHHhCCCcEEEEecc
Confidence 3444433334 6899999 7899999998765544567777654
No 470
>PRK11609 nicotinamidase/pyrazinamidase; Provisional
Probab=24.71 E-value=2.7e+02 Score=21.08 Aligned_cols=48 Identities=10% Similarity=-0.088 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhccccceEEEeecCC
Q 045862 66 GDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRANRIKALVNLSVVF 115 (271)
Q Consensus 66 ~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 115 (271)
.++..+|+..++ +.++|+|-+.-..|-.-+...+-....-+|+-++..
T Consensus 131 T~L~~~L~~~gi--~~lii~G~~T~~CV~~Ta~dA~~~gy~v~v~~Da~a 178 (212)
T PRK11609 131 TALDDWLREHGI--TELIVMGLATDYCVKFTVLDALALGYQVNVITDGCR 178 (212)
T ss_pred ccHHHHHHHcCC--CEEEEEEeccCHHHHHHHHHHHHCCCEEEEEeeccC
Confidence 578889999999 999999999988777666655555567677777654
No 471
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=24.71 E-value=1.3e+02 Score=22.18 Aligned_cols=33 Identities=12% Similarity=-0.103 Sum_probs=18.9
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhC-CCeEEe
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASL-SYRAVA 41 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~ 41 (271)
+..++++||..............+++. ++.|++
T Consensus 81 g~ki~l~HGh~~~~~~~~~~l~~la~~~~~Dvli 114 (172)
T COG0622 81 GVKIFLTHGHLYFVKTDLSLLEYLAKELGADVLI 114 (172)
T ss_pred CEEEEEECCCccccccCHHHHHHHHHhcCCCEEE
Confidence 456778888665544444555555543 455554
No 472
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=24.66 E-value=1.5e+02 Score=17.50 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=26.2
Q ss_pred hhcCCCceEEEeCCCCccccccChHHHHHHHHHHHhhh
Q 045862 207 RDVPLLEEITIMEGVGHFINQEKGHQLETEIGTSRGEK 244 (271)
Q Consensus 207 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 244 (271)
+..|+. .+ .+-++.++.-.|.++++.+.+.+|-.+.
T Consensus 23 e~~PDT-vI-tL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 23 EETPDT-VI-TLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred EEcCCe-EE-EEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 335664 44 4445567888999999999999997764
No 473
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=24.56 E-value=1.9e+02 Score=20.51 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=25.3
Q ss_pred HhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHH
Q 045862 62 FHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFL 97 (271)
Q Consensus 62 ~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~ 97 (271)
......+...+..++. +.++++||+-=|.+...+
T Consensus 39 ~~~~~sle~av~~l~v--~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 39 DSALASLEYAVYHLGV--KEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHHTST---SEEEEEEETT-HHHHHHH
T ss_pred cchhhheeeeeecCCC--CEEEEEcCCCchHHHHHH
Confidence 4566777778888999 999999999888776443
No 474
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=24.24 E-value=1.1e+02 Score=20.26 Aligned_cols=70 Identities=13% Similarity=0.036 Sum_probs=38.3
Q ss_pred EEEEeccCCCccchHHHHHHHhhC-CCeEEeeCC--CCCCCCCCCcccCcchHHhHHHHHHHHHHHh----CCCCCceEE
Q 045862 12 ILFLYVFPELRYSWCHQTIALASL-SYRAVAPDL--SGFGDTDELLEMTSYTCFHVIGDLIGLIDLV----APNDEKMFV 84 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~~l~~~-g~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~~~l 84 (271)
+|+|-|.++++.+- ++..|++. |+.++..|- +-.+....... .........+.+...++.+ .. ..+++
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~--~~~ii 75 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERDDD-EREYIDADIDLLDDILEQLQNKPDN--DNWII 75 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGCTT-CCHHHHHHHHHHHHHHHHHHETTT----EEEE
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccCcc-hhhHHHHHHHHHHHHHHhhhccCCC--CeEEE
Confidence 68899999888753 33455554 799988887 54444422221 1112333444455555554 22 34566
Q ss_pred EE
Q 045862 85 VG 86 (271)
Q Consensus 85 vG 86 (271)
-|
T Consensus 76 ~g 77 (121)
T PF13207_consen 76 DG 77 (121)
T ss_dssp EC
T ss_pred eC
Confidence 56
No 475
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=24.00 E-value=38 Score=29.43 Aligned_cols=30 Identities=17% Similarity=0.323 Sum_probs=24.3
Q ss_pred CceEEEEeChhhHHHHHHHHhhccccceEE
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRANRIKALV 109 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 109 (271)
=|=++.|-|+||.||..++.+.-+.++++.
T Consensus 202 lP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 202 LPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 366899999999999999998766565544
No 476
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=23.99 E-value=2.4e+02 Score=23.18 Aligned_cols=27 Identities=11% Similarity=0.059 Sum_probs=19.6
Q ss_pred CCceEEEEeccCCCccchH--HHHHHHhh
Q 045862 8 QGPEILFLYVFPELRYSWC--HQTIALAS 34 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~--~~~~~l~~ 34 (271)
++|-+|=+||+.+++..|- -+++.+-.
T Consensus 108 ~KPLvLSfHG~tGTGKN~Va~iiA~n~~~ 136 (344)
T KOG2170|consen 108 RKPLVLSFHGWTGTGKNYVAEIIAENLYR 136 (344)
T ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHHh
Confidence 4688999999999998874 33444443
No 477
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=23.90 E-value=1.5e+02 Score=23.15 Aligned_cols=54 Identities=9% Similarity=-0.011 Sum_probs=30.3
Q ss_pred eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCce--EEEEeChhhHHH
Q 045862 38 RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKM--FVVGHDSGTYMA 94 (271)
Q Consensus 38 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~--~lvGhS~Gg~ia 94 (271)
=|..+|-+|...+...+ -+.+......+...+......+.|+ .++|++++|...
T Consensus 67 Iv~lVD~~sQa~grreE---llGi~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFL 122 (234)
T PF06833_consen 67 IVALVDVPSQAYGRREE---LLGINQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFL 122 (234)
T ss_pred EEEEEeCCccccchHHH---HhhHHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHH
Confidence 48889999987776554 3444444333333332221111344 479999988543
No 478
>cd01126 TraG_VirD4 The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.
Probab=23.85 E-value=1.8e+02 Score=24.51 Aligned_cols=28 Identities=7% Similarity=-0.064 Sum_probs=20.9
Q ss_pred cchHHHHHHHhhCCCeEEeeCCCCCCCC
Q 045862 23 YSWCHQTIALASLSYRAVAPDLSGFGDT 50 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S 50 (271)
+.|......+...|+.|+++|..+-..+
T Consensus 36 e~~~~t~~~r~~~G~~V~v~nP~~~~~~ 63 (384)
T cd01126 36 ENFELTSEHRRALGRKVFVFDPTNPRGR 63 (384)
T ss_pred hHHHHHHHHHHHcCCeEEEEcCCCCCCC
Confidence 4566667777777999999998765544
No 479
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=23.82 E-value=1.9e+02 Score=22.84 Aligned_cols=39 Identities=5% Similarity=0.052 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhcc
Q 045862 64 VIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRAN 103 (271)
Q Consensus 64 ~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 103 (271)
.++.+..+.+.+.-. ++++++|..-.|.++...|...+.
T Consensus 35 I~~av~~~~~~l~~g-grl~~~GaGtSg~la~~da~e~~~ 73 (257)
T cd05007 35 IARAVDAAAERLRAG-GRLIYVGAGTSGRLGVLDASELPP 73 (257)
T ss_pred HHHHHHHHHHHHHcC-CEEEEEcCcHHHHHHHHHHHhccc
Confidence 444444444444321 689999999999999877766543
No 480
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=23.77 E-value=3.7e+02 Score=21.31 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=49.7
Q ss_pred ceEEEEeccCCCccchHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeC
Q 045862 10 PEILFLYVFPELRYSWCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHD 88 (271)
Q Consensus 10 ~~vlllHG~~~~~~~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS 88 (271)
|.+++..-.+--......+++.+++.|. -++++|+| + +.++++...++.+++ ..+.++.-+
T Consensus 91 p~vlm~Y~N~i~~~G~e~f~~~~~~aGvdGviipDLp---------------~-ee~~~~~~~~~~~gl--~~I~lvap~ 152 (258)
T PRK13111 91 PIVLMTYYNPIFQYGVERFAADAAEAGVDGLIIPDLP---------------P-EEAEELRAAAKKHGL--DLIFLVAPT 152 (258)
T ss_pred CEEEEecccHHhhcCHHHHHHHHHHcCCcEEEECCCC---------------H-HHHHHHHHHHHHcCC--cEEEEeCCC
Confidence 4444443333344456788888888876 57888876 1 356677777888999 888888877
Q ss_pred hhhHHHHHHHHhhcc
Q 045862 89 SGTYMACFLCLFRAN 103 (271)
Q Consensus 89 ~Gg~ia~~~a~~~p~ 103 (271)
.----.-.++..-+.
T Consensus 153 t~~eri~~i~~~s~g 167 (258)
T PRK13111 153 TTDERLKKIASHASG 167 (258)
T ss_pred CCHHHHHHHHHhCCC
Confidence 755444445544333
No 481
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=23.76 E-value=2.8e+02 Score=19.79 Aligned_cols=38 Identities=16% Similarity=0.123 Sum_probs=26.3
Q ss_pred CCCce-EEEEeccCCCccchHHHHHHHhhCCCeEEeeCC
Q 045862 7 GQGPE-ILFLYVFPELRYSWCHQTIALASLSYRAVAPDL 44 (271)
Q Consensus 7 g~~~~-vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~ 44 (271)
|.+|. +|.-.|+-++...-+-+.+.|++.||.|+..=+
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 45665 444557666666666777889999999987544
No 482
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=23.75 E-value=81 Score=22.66 Aligned_cols=32 Identities=16% Similarity=-0.016 Sum_probs=23.3
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEe
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVA 41 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~ 41 (271)
..+++||.+|.+..+ +..+++.|.+.|.+++.
T Consensus 40 ~~~pLVCt~G~p~~A--~~~LL~~L~~~g~~l~y 71 (152)
T PF09664_consen 40 SCPPLVCTSGQPSAA--ARRLLDRLAAAGARLYY 71 (152)
T ss_pred CCCeEEEcCCcHHHH--HHHHHHHHHhCCCEEEE
Confidence 357899998886554 55788888887876553
No 483
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=23.56 E-value=1.8e+02 Score=22.28 Aligned_cols=34 Identities=9% Similarity=-0.145 Sum_probs=22.9
Q ss_pred CceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCC
Q 045862 9 GPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 9 ~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
+.++++. | +++..=..++..|.+.|++|++++..
T Consensus 12 ~k~vlIt-G--~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 12 DRIILVT-G--AGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred CCEEEEe-C--CCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 3455555 3 34455566777888889999998864
No 484
>PRK09273 hypothetical protein; Provisional
Probab=23.40 E-value=3.5e+02 Score=20.79 Aligned_cols=78 Identities=10% Similarity=-0.058 Sum_probs=40.2
Q ss_pred cchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHHhhc
Q 045862 23 YSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
-.+..+.++|.+.||.|+=+-. + +... ...++.+++..+...+..-.. ...+++-..|-.+ ...|.++|
T Consensus 17 ~i~~~L~~~L~~~G~eV~D~G~--~---~~~~--~s~dYpd~a~~vA~~V~~g~~---d~GIliCGTGiG~-siAANK~p 85 (211)
T PRK09273 17 IIYEALKKVADPKGHEVFNYGM--Y---DEED--HQLTYVQNGIMASILLNSKAV---DFVVTGCGTGQGA-MLALNSFP 85 (211)
T ss_pred HHHHHHHHHHHHCCCEEEEeCC--C---CCCC--CCCChHHHHHHHHHHHHcCCC---CEEEEEcCcHHHH-HHHHhcCC
Confidence 3578888999999998853321 1 1111 135566777777666644222 3333333333222 23445666
Q ss_pred cccceEEEee
Q 045862 103 NRIKALVNLS 112 (271)
Q Consensus 103 ~~v~~lvl~~ 112 (271)
. |.+....+
T Consensus 86 G-Iraalc~d 94 (211)
T PRK09273 86 G-VVCGYCID 94 (211)
T ss_pred C-eEEEEeCC
Confidence 5 44444444
No 485
>PRK08506 replicative DNA helicase; Provisional
Probab=23.08 E-value=4.3e+02 Score=23.19 Aligned_cols=63 Identities=10% Similarity=-0.107 Sum_probs=36.7
Q ss_pred CccchHHHHHHHhhC--CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 21 LRYSWCHQTIALASL--SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 21 ~~~~~~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
+.......+..+..+ +..++++|+.+.-.++.........+......|..+.+.+++ +++++.
T Consensus 285 ti~~I~~~~r~l~~~~~~~~lvvIDyLql~~~~~~~~~r~~ev~~isr~LK~lAkel~i---pVi~ls 349 (472)
T PRK08506 285 NIHQVRAQLRKLKSQHPEIGLAVIDYLQLMSGSGNFKDRHLQISEISRGLKLLARELDI---PIIALS 349 (472)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEcChhhccCCCCCCCHHHHHHHHHHHHHHHHHHhCC---cEEEEe
Confidence 334444555556543 478999998765443222111233456667777777788877 566555
No 486
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=22.99 E-value=2.8e+02 Score=21.90 Aligned_cols=59 Identities=10% Similarity=0.100 Sum_probs=42.3
Q ss_pred chHHhHHHHHHHHHHHhCCCCCc--eEE---EEeChhhHHHHHHH-HhhccccceEEEeecCCCC
Q 045862 59 YTCFHVIGDLIGLIDLVAPNDEK--MFV---VGHDSGTYMACFLC-LFRANRIKALVNLSVVFNP 117 (271)
Q Consensus 59 ~~~~~~~~~l~~~l~~l~~~~~~--~~l---vGhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~ 117 (271)
.+-.++-.+++.++...++.+++ .++ .|+++-|..|...- .-.|..|+++.+++|.-..
T Consensus 17 ~~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHHv 81 (296)
T KOG3086|consen 17 ASGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHHV 81 (296)
T ss_pred CCHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCccee
Confidence 45678889999999987764333 444 47888786665444 4467889999999986544
No 487
>PRK05636 replicative DNA helicase; Provisional
Probab=22.94 E-value=3.8e+02 Score=23.81 Aligned_cols=59 Identities=8% Similarity=0.027 Sum_probs=34.1
Q ss_pred hHHHHHHHhh-CCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 25 WCHQTIALAS-LSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 25 ~~~~~~~l~~-~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
....+..+.. .|..++++|+.+.=.+..........+......|..+.+.+++ +|+++.
T Consensus 363 I~~~~r~~~~~~~~~lvvIDYLql~~~~~~~~~r~~ei~~isr~LK~lAkel~i---pVi~ls 422 (505)
T PRK05636 363 IRSKARRLKQKHDLKLIVVDYLQLMSSGKRVESRQQEVSEFSRQLKLLAKELDV---PLIAIS 422 (505)
T ss_pred HHHHHHHHHHhcCCCEEEEcchHhcCCCCCCCcHHHHHHHHHHHHHHHHHHhCC---eEEEEe
Confidence 4444555533 4678999998765432211111223466677777777777776 555554
No 488
>cd06583 PGRP Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of
Probab=22.90 E-value=1.6e+02 Score=19.79 Aligned_cols=31 Identities=16% Similarity=0.038 Sum_probs=23.2
Q ss_pred chHHhHHHHHHHHHHHhCCCCC-ceEEEEeChhh
Q 045862 59 YTCFHVIGDLIGLIDLVAPNDE-KMFVVGHDSGT 91 (271)
Q Consensus 59 ~~~~~~~~~l~~~l~~l~~~~~-~~~lvGhS~Gg 91 (271)
..++.++..+..+++..++ . .-.|+||....
T Consensus 86 ~q~~~~~~L~~~l~~~~~i--~~~~~i~~H~~~~ 117 (126)
T cd06583 86 AQLEALAELLAYLVKRYGI--PPDYRIVGHRDVS 117 (126)
T ss_pred HHHHHHHHHHHHHHHhCCC--CCCCEEEecccCC
Confidence 4566677777777888888 5 68899998754
No 489
>PLN03019 carbonic anhydrase
Probab=22.62 E-value=1.3e+02 Score=24.80 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHH
Q 045862 63 HVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFL 97 (271)
Q Consensus 63 ~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~ 97 (271)
.....|+..+.+++. +.++++|||-=|.|...+
T Consensus 200 ~v~aSIEYAV~~L~V--~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 200 GVGAAIEYAVLHLKV--ENIVVIGHSACGGIKGLM 232 (330)
T ss_pred ccchhHHHHHHHhCC--CEEEEecCCCchHHHHHH
Confidence 355678888899999 999999999766555433
No 490
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=22.50 E-value=2.5e+02 Score=18.73 Aligned_cols=78 Identities=14% Similarity=0.027 Sum_probs=43.4
Q ss_pred CCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEe
Q 045862 8 QGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGH 87 (271)
Q Consensus 8 ~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGh 87 (271)
+.|.|+|.--+...+..-+.+...+.. .+.|+-+|...+|. ++.+.+..+-..-.. ..+.+-|.
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v-~~~vvELD~~~~g~-------------eiq~~l~~~tg~~tv--P~vFI~Gk 76 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGV-NPKVVELDEDEDGS-------------EIQKALKKLTGQRTV--PNVFIGGK 76 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCC-CCEEEEccCCCCcH-------------HHHHHHHHhcCCCCC--CEEEECCE
Confidence 457788876444433334444444433 37788887664431 222233322222245 57889999
Q ss_pred ChhhHHHHHHHHhh
Q 045862 88 DSGTYMACFLCLFR 101 (271)
Q Consensus 88 S~Gg~ia~~~a~~~ 101 (271)
+.||.--+......
T Consensus 77 ~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 77 FIGGASDLMALHKS 90 (104)
T ss_pred EEcCHHHHHHHHHc
Confidence 99998766655543
No 491
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=22.46 E-value=4.7e+02 Score=22.01 Aligned_cols=34 Identities=12% Similarity=-0.132 Sum_probs=25.3
Q ss_pred ceEEEEeccCC--CccchHHHHHHHhhCCCeEEeeC
Q 045862 10 PEILFLYVFPE--LRYSWCHQTIALASLSYRAVAPD 43 (271)
Q Consensus 10 ~~vlllHG~~~--~~~~~~~~~~~l~~~g~~vi~~D 43 (271)
..++++.|-.. ....+..+.+.|.+.|..+..+|
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~ 61 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFD 61 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeC
Confidence 56788887554 45567888889988788887775
No 492
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=22.34 E-value=1.7e+02 Score=24.80 Aligned_cols=40 Identities=13% Similarity=-0.036 Sum_probs=26.8
Q ss_pred eEEEEeccCCCccc--hHHHHHHHhhCCCeEEeeCC-CCCCCC
Q 045862 11 EILFLYVFPELRYS--WCHQTIALASLSYRAVAPDL-SGFGDT 50 (271)
Q Consensus 11 ~vlllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~-~G~G~S 50 (271)
.|.+...=||.+.. =..++..|+.+|++|+++|+ -..|..
T Consensus 108 vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~nl 150 (387)
T PHA02519 108 VLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGTA 150 (387)
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCc
Confidence 34444444555544 34667788888999999996 666644
No 493
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.18 E-value=1.4e+02 Score=22.44 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHH
Q 045862 64 VIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFL 97 (271)
Q Consensus 64 ~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~ 97 (271)
....|+..+..++. +.++++|||-=|.+...+
T Consensus 73 ~~asleyav~~l~v--~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 73 TSAAIEYAVAVLKV--EHIVVCGHSDCGGIRALL 104 (190)
T ss_pred hhhhHHHHHHHhCC--CEEEEeCCCcchHHHHHh
Confidence 56677788899999 899999999777665544
No 494
>PRK13938 phosphoheptose isomerase; Provisional
Probab=22.14 E-value=2.6e+02 Score=21.05 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=21.0
Q ss_pred CceEEEEeChhhHHHHHHHHhhc
Q 045862 80 EKMFVVGHDSGTYMACFLCLFRA 102 (271)
Q Consensus 80 ~~~~lvGhS~Gg~ia~~~a~~~p 102 (271)
++++++|..-+|.+|..++.+..
T Consensus 46 ~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 46 ARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CEEEEEeCcHHHHHHHHHHHHcC
Confidence 78999999999999999998764
No 495
>PRK08006 replicative DNA helicase; Provisional
Probab=22.05 E-value=4.1e+02 Score=23.32 Aligned_cols=63 Identities=6% Similarity=-0.031 Sum_probs=36.1
Q ss_pred CccchHHHHHHHhhC--CCeEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEE
Q 045862 21 LRYSWCHQTIALASL--SYRAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVG 86 (271)
Q Consensus 21 ~~~~~~~~~~~l~~~--g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvG 86 (271)
+.......+..+..+ |..++++|+.+.=.+..........+......+..+.+.+++ +++++.
T Consensus 319 t~~~i~~~~r~~~~~~~~~~lvvIDYLqli~~~~~~~~r~~ei~~isr~LK~lAkel~i---pVi~Ls 383 (471)
T PRK08006 319 TPTEVRSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQV---PVVALS 383 (471)
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEccHHHccCCCCCCCcHHHHHHHHHHHHHHHHHhCC---eEEEEE
Confidence 344444455554432 578999998765432211111233466777778888888877 455544
No 496
>PLN03006 carbonate dehydratase
Probab=22.03 E-value=1.3e+02 Score=24.52 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCCCCCceEEEEeChhhHHHHH
Q 045862 64 VIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACF 96 (271)
Q Consensus 64 ~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~ 96 (271)
....|+..+.+|+. +.++++|||-=|.+...
T Consensus 158 ~~aSLEYAV~~L~V--~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNTLNV--ENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHHhCC--CEEEEecCCCchHHHHH
Confidence 55678888899999 99999999976665543
No 497
>PF05707 Zot: Zonular occludens toxin (Zot); InterPro: IPR008900 This entry consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophage present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.; PDB: 2R2A_B.
Probab=21.92 E-value=1.1e+02 Score=22.82 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=19.3
Q ss_pred EEEEeccCCCccchHHHHH----HHhhCCCeEEeeCCCCCC
Q 045862 12 ILFLYVFPELRYSWCHQTI----ALASLSYRAVAPDLSGFG 48 (271)
Q Consensus 12 vlllHG~~~~~~~~~~~~~----~l~~~g~~vi~~D~~G~G 48 (271)
|.++.|.+++..++..+.. .+. +|..|++ +.+|.-
T Consensus 2 I~~~~G~pGsGKS~~av~~~i~~~l~-~gr~V~t-ni~gL~ 40 (193)
T PF05707_consen 2 IYLITGKPGSGKSYYAVSYVIIPALK-KGRPVYT-NIPGLN 40 (193)
T ss_dssp EEEEE--TTSSHHHHHHHHHHH-GGG-S---EEE---TTB-
T ss_pred EEEEEcCCCCcHhHHHHHHHHHHHHh-CCCEEEE-ccCCcc
Confidence 7889999999999865443 344 4777777 888754
No 498
>PRK07206 hypothetical protein; Provisional
Probab=21.83 E-value=4.3e+02 Score=22.41 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=23.1
Q ss_pred eEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCCC
Q 045862 11 EILFLYVFPELRYSWCHQTIALASLSYRAVAPDLSG 46 (271)
Q Consensus 11 ~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 46 (271)
.|++|-|... -..+++.+.+.||+++++|-.+
T Consensus 4 ~~liv~~~~~----~~~~~~a~~~~G~~~v~v~~~~ 35 (416)
T PRK07206 4 KVVIVDPFSS----GKFLAPAFKKRGIEPIAVTSSC 35 (416)
T ss_pred eEEEEcCCch----HHHHHHHHHHcCCeEEEEEcCC
Confidence 6788876422 2457788888899999998554
No 499
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=21.83 E-value=1.5e+02 Score=23.84 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=24.4
Q ss_pred CCCceEEEEeccCCCccchHHHHHHHhhCCCeEEeeCCC
Q 045862 7 GQGPEILFLYVFPELRYSWCHQTIALASLSYRAVAPDLS 45 (271)
Q Consensus 7 g~~~~vlllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 45 (271)
|.+..|++. |+++..=..++..|.++|++|++++..
T Consensus 2 ~~~~~ilVt---GatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 2 GEGKVVCVT---GASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCCEEEEE---CChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 445554444 344555567888898889999887754
No 500
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=21.82 E-value=1.1e+02 Score=24.40 Aligned_cols=58 Identities=9% Similarity=-0.073 Sum_probs=37.7
Q ss_pred chHHHHHHHhhCCC-eEEeeCCCCCCCCCCCcccCcchHHhHHHHHHHHHHHhCCCCCceEEEEeChhhHHHHHHHH
Q 045862 24 SWCHQTIALASLSY-RAVAPDLSGFGDTDELLEMTSYTCFHVIGDLIGLIDLVAPNDEKMFVVGHDSGTYMACFLCL 99 (271)
Q Consensus 24 ~~~~~~~~l~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~a~ 99 (271)
.+..+++.+++.|. -+|.+|+|- +..+.+...++..++ ..+.++.-+.----.-.++.
T Consensus 103 G~e~F~~~~~~aGvdGlIipDLP~----------------ee~~~~~~~~~~~gl--~~I~lv~p~t~~~Ri~~i~~ 161 (259)
T PF00290_consen 103 GIERFFKEAKEAGVDGLIIPDLPP----------------EESEELREAAKKHGL--DLIPLVAPTTPEERIKKIAK 161 (259)
T ss_dssp -HHHHHHHHHHHTEEEEEETTSBG----------------GGHHHHHHHHHHTT---EEEEEEETTS-HHHHHHHHH
T ss_pred chHHHHHHHHHcCCCEEEEcCCCh----------------HHHHHHHHHHHHcCC--eEEEEECCCCCHHHHHHHHH
Confidence 35567777777665 599999981 233566777888999 88888887555544444444
Done!