Query 045863
Match_columns 537
No_of_seqs 279 out of 1932
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 06:17:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045863.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045863hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00137 NHAD transporter fami 100.0 1.4E-51 3E-56 440.4 39.5 392 144-537 4-397 (424)
2 TIGR00775 NhaD Na+/H+ antiport 100.0 6.3E-49 1.4E-53 419.8 39.0 378 146-536 4-388 (420)
3 COG1055 ArsB Na+/H+ antiporter 100.0 4.4E-45 9.6E-50 387.1 38.0 371 144-535 4-393 (424)
4 PRK15445 arsenical pump membra 100.0 1.3E-42 2.8E-47 373.1 40.0 368 147-533 2-390 (427)
5 PLN00136 silicon transporter; 100.0 1.1E-42 2.4E-47 377.1 37.4 363 146-533 11-444 (482)
6 cd01118 ArsB_permease Anion pe 100.0 2.3E-41 5E-46 362.0 39.8 365 148-531 2-383 (416)
7 PF00939 Na_sulph_symp: Sodium 100.0 4.6E-42 1E-46 373.2 34.1 395 117-536 3-439 (471)
8 TIGR00935 2a45 arsenical pump 100.0 1.5E-39 3.3E-44 349.4 39.0 361 147-531 3-389 (429)
9 TIGR00785 dass anion transport 100.0 3.2E-39 6.9E-44 348.3 35.8 375 137-536 1-418 (444)
10 cd01117 YbiR_permease Putative 100.0 7.2E-39 1.6E-43 339.0 37.8 339 164-534 8-355 (384)
11 PF02040 ArsB: Arsenical pump 100.0 1.5E-38 3.2E-43 337.9 37.9 371 148-534 2-390 (423)
12 cd01116 P_permease Permease P 100.0 6.9E-38 1.5E-42 334.6 37.5 354 152-532 1-381 (413)
13 COG0471 CitT Di- and tricarbox 100.0 1.6E-37 3.5E-42 336.3 36.5 383 133-537 18-431 (461)
14 PRK09547 nhaB sodium/proton an 100.0 4.4E-37 9.6E-42 329.1 39.2 395 103-532 4-466 (513)
15 KOG2639 Sodium sulfate symport 100.0 8E-37 1.7E-41 319.4 24.7 365 144-532 177-644 (685)
16 cd01115 SLC13_permease Permeas 100.0 5.1E-33 1.1E-37 293.7 34.7 330 149-536 1-356 (382)
17 cd00625 ArsB_NhaD_permease Ani 100.0 6.2E-33 1.3E-37 294.3 31.0 345 157-533 2-366 (396)
18 TIGR00774 NhaB Na+/H+ antiport 100.0 5.4E-31 1.2E-35 276.0 36.2 402 103-533 4-465 (515)
19 PF03600 CitMHS: Citrate trans 100.0 6.5E-29 1.4E-33 260.0 33.7 312 154-514 8-350 (351)
20 TIGR00784 citMHS citrate trans 99.9 7.6E-24 1.7E-28 227.9 34.8 358 151-536 9-400 (431)
21 KOG1281 Na+/dicarboxylate, Na+ 99.9 1.2E-24 2.7E-29 233.5 24.1 366 153-534 49-545 (586)
22 COG2851 CitM H+/citrate sympor 99.8 1.2E-18 2.6E-23 177.5 25.7 328 193-537 45-403 (433)
23 PRK09412 anaerobic C4-dicarbox 99.7 1.1E-14 2.4E-19 156.9 31.7 295 207-520 49-383 (433)
24 PLN00136 silicon transporter; 99.7 2.4E-15 5.2E-20 163.9 20.9 165 165-339 299-477 (482)
25 cd01116 P_permease Permease P 99.7 4.7E-15 1E-19 158.8 21.7 180 146-337 218-410 (413)
26 PRK15445 arsenical pump membra 99.7 8.3E-15 1.8E-19 157.8 21.8 188 146-339 224-420 (427)
27 TIGR00786 dctM TRAP transporte 99.6 9.1E-13 2E-17 141.1 36.1 300 217-536 48-373 (405)
28 cd01115 SLC13_permease Permeas 99.6 2.1E-14 4.6E-19 151.9 22.2 180 148-341 190-380 (382)
29 TIGR00785 dass anion transport 99.6 1.3E-14 2.8E-19 156.9 19.9 183 144-339 247-440 (444)
30 TIGR00770 Dcu anaerobic c4-dic 99.6 3.6E-12 7.9E-17 137.0 29.9 166 207-376 45-231 (430)
31 COG1055 ArsB Na+/H+ antiporter 99.6 2.6E-13 5.7E-18 144.9 20.4 187 146-341 225-423 (424)
32 TIGR00935 2a45 arsenical pump 99.5 4.6E-13 1E-17 144.3 21.9 184 146-340 225-422 (429)
33 TIGR00771 DcuC c4-dicarboxylat 99.5 1.9E-11 4.1E-16 130.1 31.8 323 204-536 18-372 (388)
34 cd01118 ArsB_permease Anion pe 99.5 1.1E-12 2.3E-17 140.9 20.5 179 149-337 226-413 (416)
35 PF06450 NhaB: Bacterial Na+/H 99.5 7.2E-12 1.6E-16 128.8 23.8 388 105-521 6-450 (515)
36 PRK12489 anaerobic C4-dicarbox 99.5 7.6E-11 1.7E-15 126.4 32.3 137 207-348 49-202 (443)
37 PF00939 Na_sulph_symp: Sodium 99.5 9.5E-13 2.1E-17 143.7 17.7 183 144-337 267-459 (471)
38 KOG2639 Sodium sulfate symport 99.5 2.4E-12 5.2E-17 136.5 19.4 163 166-339 494-675 (685)
39 PRK10654 dcuC C4-dicarboxylate 99.5 5.2E-10 1.1E-14 121.1 37.7 315 207-536 78-425 (455)
40 COG0471 CitT Di- and tricarbox 99.5 2.6E-12 5.6E-17 139.8 19.3 183 144-340 261-453 (461)
41 PRK09547 nhaB sodium/proton an 99.5 2.8E-12 6E-17 138.7 19.0 166 167-341 318-498 (513)
42 cd01117 YbiR_permease Putative 99.4 3.9E-12 8.5E-17 135.0 18.7 169 148-336 208-381 (384)
43 TIGR00775 NhaD Na+/H+ antiport 99.3 5.7E-11 1.2E-15 127.8 14.3 145 380-536 17-173 (420)
44 PF03600 CitMHS: Citrate trans 99.3 4.7E-11 1E-15 125.2 13.3 144 385-536 15-167 (351)
45 cd00625 ArsB_NhaD_permease Ani 99.2 3.7E-10 8E-15 120.0 19.7 178 147-337 209-394 (396)
46 PLN00137 NHAD transporter fami 99.2 3.6E-10 7.8E-15 121.7 18.6 167 160-337 241-416 (424)
47 TIGR00791 gntP gluconate trans 99.2 6.3E-08 1.4E-12 105.1 35.7 168 166-340 21-195 (440)
48 COG3067 NhaB Na+/H+ antiporter 99.2 5.6E-09 1.2E-13 105.5 22.7 390 105-521 6-450 (516)
49 TIGR00774 NhaB Na+/H+ antiport 99.2 1.2E-09 2.6E-14 116.1 17.8 170 167-341 317-497 (515)
50 PRK09804 putative cryptic C4-d 99.1 5.2E-07 1.1E-11 96.7 34.6 326 193-535 60-427 (455)
51 PF02040 ArsB: Arsenical pump 99.1 1.2E-08 2.5E-13 109.6 21.7 173 155-333 232-413 (423)
52 PF02447 GntP_permease: GntP f 99.1 3.3E-07 7.2E-12 98.9 31.6 162 167-334 22-188 (441)
53 PRK09821 putative transporter; 99.1 4.9E-07 1.1E-11 97.8 32.9 176 158-341 20-199 (454)
54 PRK14984 high-affinity glucona 99.0 9.7E-07 2.1E-11 95.1 33.5 163 167-333 22-187 (438)
55 PRK10472 low affinity gluconat 99.0 1.1E-06 2.4E-11 94.9 33.3 163 167-334 26-192 (445)
56 PRK15060 L-dehydroascorbate tr 99.0 7.6E-06 1.6E-10 88.1 37.3 303 216-536 63-389 (425)
57 PF03606 DcuC: C4-dicarboxylat 99.0 1.3E-06 2.9E-11 95.4 31.6 321 204-536 76-438 (465)
58 PF06808 DctM: DctM-like trans 98.9 3.2E-06 7E-11 91.2 30.8 303 216-535 62-388 (416)
59 TIGR00931 antiport_nhaC Na+/H+ 98.8 5E-05 1.1E-09 82.8 36.9 146 190-339 51-202 (454)
60 TIGR00529 AF0261 converved hyp 98.8 3.1E-05 6.7E-10 82.7 34.6 276 149-461 6-288 (387)
61 PRK10034 fructuronate transpor 98.8 1.5E-05 3.3E-10 86.3 32.4 159 167-331 25-188 (447)
62 PF03605 DcuA_DcuB: Anaerobic 98.8 4.1E-06 8.8E-11 87.1 26.7 139 207-349 45-195 (364)
63 TIGR00784 citMHS citrate trans 98.8 7.4E-07 1.6E-11 96.5 21.9 167 158-336 244-419 (431)
64 PRK09921 permease DsdX; Provis 98.8 2.6E-05 5.5E-10 84.7 33.2 163 167-334 27-192 (445)
65 TIGR00786 dctM TRAP transporte 98.8 1.3E-06 2.8E-11 93.7 23.2 182 146-336 201-392 (405)
66 PF04165 DUF401: Protein of un 98.7 5.3E-05 1.2E-09 80.7 33.4 321 149-517 5-341 (385)
67 COG3069 DcuC C4-dicarboxylate 98.7 1.4E-05 3E-10 82.7 27.0 320 192-522 58-411 (451)
68 TIGR02123 TRAP_fused TRAP tran 98.7 1.8E-05 3.8E-10 89.0 29.7 304 216-535 175-504 (613)
69 COG2610 GntT H+/gluconate symp 98.6 5.8E-05 1.3E-09 81.2 29.4 105 167-274 23-129 (442)
70 COG1593 DctQ TRAP-type C4-dica 98.5 0.00018 3.9E-09 75.7 29.0 307 211-534 11-341 (379)
71 PF07158 MatC_N: Dicarboxylate 98.5 8.4E-06 1.8E-10 75.2 15.9 120 143-274 2-126 (149)
72 KOG1281 Na+/dicarboxylate, Na+ 98.4 3.4E-07 7.4E-12 99.9 6.9 123 206-332 433-562 (586)
73 COG2056 Predicted permease [Ge 98.3 0.0015 3.2E-08 67.7 29.5 259 190-465 39-334 (444)
74 PF07399 DUF1504: Protein of u 98.3 0.00026 5.7E-09 74.5 24.0 314 190-536 85-410 (438)
75 PRK10654 dcuC C4-dicarboxylate 98.2 0.00017 3.7E-09 78.6 22.6 145 190-339 291-447 (455)
76 PF07854 DUF1646: Protein of u 98.0 0.0013 2.8E-08 67.4 21.7 93 239-331 98-190 (347)
77 PRK11588 hypothetical protein; 98.0 0.0033 7.2E-08 68.9 26.5 314 207-536 111-475 (506)
78 PF02652 Lactate_perm: L-lacta 98.0 0.053 1.1E-06 60.3 36.0 103 420-529 378-487 (522)
79 COG2704 DcuB Anaerobic C4-dica 98.0 0.00037 8E-09 72.3 17.2 139 207-349 49-198 (436)
80 PRK12489 anaerobic C4-dicarbox 97.9 0.00018 3.9E-09 77.8 14.5 103 425-528 44-155 (443)
81 COG1906 Uncharacterized conser 97.9 0.015 3.3E-07 59.6 27.1 330 146-517 5-344 (388)
82 COG1757 NhaC Na+/H+ antiporter 97.9 0.025 5.4E-07 62.4 31.1 171 166-340 43-219 (485)
83 PRK15060 L-dehydroascorbate tr 97.8 0.0056 1.2E-07 66.2 23.2 141 190-336 260-408 (425)
84 TIGR00771 DcuC c4-dicarboxylat 97.8 0.0022 4.7E-08 68.8 19.8 123 204-332 256-387 (388)
85 COG1288 Predicted membrane pro 97.7 0.00092 2E-08 71.1 16.0 314 207-537 98-454 (481)
86 TIGR00819 ydaH p-Aminobenzoyl- 97.7 0.026 5.6E-07 62.2 27.6 102 203-310 82-188 (513)
87 COG1593 DctQ TRAP-type C4-dica 97.7 0.0075 1.6E-07 63.7 22.3 244 79-333 85-359 (379)
88 PRK11339 abgT putative aminobe 97.6 0.082 1.8E-06 58.2 29.6 86 207-297 89-178 (508)
89 PRK09412 anaerobic C4-dicarbox 97.5 0.001 2.2E-08 72.2 13.5 110 426-536 45-165 (433)
90 PF06808 DctM: DctM-like trans 97.5 0.008 1.7E-07 65.0 19.8 180 145-333 216-405 (416)
91 COG4664 FcbT3 TRAP-type mannit 97.4 0.088 1.9E-06 54.6 24.6 277 216-516 74-387 (447)
92 PF03553 Na_H_antiporter: Na+/ 97.4 0.012 2.7E-07 60.4 18.8 114 191-308 146-267 (303)
93 TIGR00770 Dcu anaerobic c4-dic 97.2 0.0047 1E-07 67.0 13.9 103 425-528 40-151 (430)
94 TIGR00795 lctP L-lactate trans 97.2 0.55 1.2E-05 52.5 34.3 71 205-278 68-145 (530)
95 PF07158 MatC_N: Dicarboxylate 97.2 0.015 3.3E-07 53.8 15.0 101 382-492 17-123 (149)
96 PF03606 DcuC: C4-dicarboxylat 97.2 0.016 3.5E-07 63.6 17.3 146 190-339 306-460 (465)
97 TIGR02123 TRAP_fused TRAP tran 97.1 0.097 2.1E-06 59.4 22.9 144 190-339 375-527 (613)
98 PRK11588 hypothetical protein; 96.9 0.16 3.4E-06 56.0 21.5 146 190-339 338-497 (506)
99 PRK09804 putative cryptic C4-d 96.8 0.18 3.9E-06 54.8 20.7 129 204-337 312-448 (455)
100 TIGR00931 antiport_nhaC Na+/H+ 96.5 0.11 2.3E-06 57.0 17.1 110 207-321 310-427 (454)
101 COG4666 TRAP-type uncharacteri 96.3 0.13 2.7E-06 57.5 16.4 309 207-536 186-531 (642)
102 PF04165 DUF401: Protein of un 96.3 0.4 8.6E-06 51.4 19.8 124 207-337 255-380 (385)
103 PRK10420 L-lactate permease; P 96.3 2.6 5.6E-05 47.4 32.7 73 204-279 76-155 (551)
104 TIGR00819 ydaH p-Aminobenzoyl- 96.3 0.54 1.2E-05 52.1 20.8 136 190-333 330-485 (513)
105 PRK09695 glycolate transporter 96.3 2.8 6E-05 47.2 33.1 73 204-279 76-155 (560)
106 PF03806 ABG_transport: AbgT p 96.2 1.1 2.3E-05 49.6 22.3 137 189-333 322-478 (502)
107 PF03806 ABG_transport: AbgT p 96.1 2.9 6.2E-05 46.2 25.7 87 207-297 79-168 (502)
108 COG1757 NhaC Na+/H+ antiporter 96.1 0.39 8.5E-06 53.1 18.7 134 193-328 310-450 (485)
109 PRK11339 abgT putative aminobe 95.9 0.9 1.9E-05 50.2 20.3 139 189-333 327-483 (508)
110 COG2851 CitM H+/citrate sympor 95.9 0.52 1.1E-05 49.8 17.3 159 155-327 243-412 (433)
111 TIGR00529 AF0261 converved hyp 95.6 1.4 3E-05 47.4 20.1 122 207-336 257-381 (387)
112 COG1288 Predicted membrane pro 95.2 0.55 1.2E-05 50.6 14.9 137 190-339 321-475 (481)
113 COG4756 Predicted cation trans 95.0 0.51 1.1E-05 47.3 13.0 99 219-318 93-191 (367)
114 COG3069 DcuC C4-dicarboxylate 94.4 1.4 2.9E-05 46.7 15.1 136 192-335 299-442 (451)
115 PF06450 NhaB: Bacterial Na+/H 94.1 0.57 1.2E-05 49.7 11.7 170 167-341 318-498 (515)
116 PF07854 DUF1646: Protein of u 93.8 0.25 5.5E-06 51.0 8.4 96 228-337 245-342 (347)
117 PF06166 DUF979: Protein of un 93.8 2.8 6.2E-05 43.0 15.6 120 217-341 172-305 (308)
118 PF02447 GntP_permease: GntP f 93.6 5.6 0.00012 43.5 18.7 157 170-333 265-429 (441)
119 COG2056 Predicted permease [Ge 93.5 4.1 8.8E-05 43.0 16.4 130 169-305 264-402 (444)
120 COG4756 Predicted cation trans 93.2 0.28 6.1E-06 49.1 7.3 80 253-341 278-358 (367)
121 PF07399 DUF1504: Protein of u 93.2 1.2 2.7E-05 47.5 12.4 111 209-334 317-434 (438)
122 TIGR00791 gntP gluconate trans 93.1 16 0.00034 39.9 21.6 136 190-332 285-426 (440)
123 PRK10472 low affinity gluconat 92.9 14 0.0003 40.5 20.5 155 169-328 265-427 (445)
124 PF03553 Na_H_antiporter: Na+/ 90.4 18 0.00038 37.0 17.3 95 431-526 163-266 (303)
125 COG2978 AbgT Putative p-aminob 88.7 28 0.00061 38.1 17.3 137 189-333 334-490 (516)
126 COG2610 GntT H+/gluconate symp 87.1 51 0.0011 36.1 20.1 83 191-274 286-374 (442)
127 TIGR00366 conserved hypothetic 87.0 27 0.0006 38.1 16.2 82 190-271 293-381 (438)
128 PF02690 Na_Pi_cotrans: Na+/Pi 86.9 5.3 0.00011 36.7 9.5 87 434-523 2-89 (142)
129 TIGR00366 conserved hypothetic 85.9 58 0.0013 35.6 29.5 100 428-530 310-422 (438)
130 PF02667 SCFA_trans: Short cha 85.9 60 0.0013 35.7 25.0 64 190-256 42-110 (453)
131 COG4664 FcbT3 TRAP-type mannit 85.5 38 0.00082 35.8 15.6 156 167-331 258-424 (447)
132 PRK09821 putative transporter; 85.5 63 0.0014 35.6 18.4 103 168-271 275-384 (454)
133 PF02667 SCFA_trans: Short cha 84.8 47 0.001 36.5 16.7 108 212-334 324-445 (453)
134 COG2978 AbgT Putative p-aminob 82.4 84 0.0018 34.6 20.2 86 207-297 90-179 (516)
135 PF03605 DcuA_DcuB: Anaerobic 81.3 15 0.00031 39.1 10.9 99 425-528 40-151 (364)
136 PF06166 DUF979: Protein of un 81.2 55 0.0012 33.9 14.6 105 421-526 154-270 (308)
137 PF06149 DUF969: Protein of un 80.1 64 0.0014 31.8 18.2 172 155-342 10-212 (218)
138 COG3067 NhaB Na+/H+ antiporter 78.7 7.4 0.00016 40.7 7.5 166 167-337 318-494 (516)
139 PF13726 Na_H_antiport_2: Na+- 77.9 32 0.00069 29.1 9.8 48 190-237 38-85 (88)
140 COG3817 Predicted membrane pro 77.5 72 0.0016 32.3 13.7 120 217-341 176-309 (313)
141 PRK10034 fructuronate transpor 76.5 1.3E+02 0.0027 33.2 18.1 97 167-264 262-360 (447)
142 COG2704 DcuB Anaerobic C4-dica 74.3 83 0.0018 33.7 13.8 42 232-277 325-367 (436)
143 PRK14984 high-affinity glucona 72.5 1.6E+02 0.0034 32.4 21.3 103 169-272 261-370 (438)
144 PRK10420 L-lactate permease; P 72.5 1.7E+02 0.0037 33.1 16.9 133 190-333 390-533 (551)
145 PF02652 Lactate_perm: L-lacta 72.1 1.7E+02 0.0038 32.8 17.3 133 190-333 370-513 (522)
146 TIGR00704 NaPi_cotrn_rel Na/Pi 71.9 35 0.00076 35.6 10.6 87 431-520 11-98 (307)
147 COG1283 NptA Na+/phosphate sym 70.8 71 0.0015 35.8 13.2 92 429-522 138-230 (533)
148 PF02690 Na_Pi_cotrans: Na+/Pi 70.2 15 0.00033 33.7 6.8 80 211-300 2-85 (142)
149 TIGR00795 lctP L-lactate trans 69.2 1.6E+02 0.0035 33.2 15.8 134 190-333 376-519 (530)
150 COG1620 LldP L-lactate permeas 68.4 2E+02 0.0044 32.1 31.5 61 428-492 378-443 (522)
151 TIGR00704 NaPi_cotrn_rel Na/Pi 68.0 1.5E+02 0.0034 30.8 14.4 90 429-520 134-224 (307)
152 PRK09695 glycolate transporter 66.5 2.1E+02 0.0046 32.4 16.1 133 190-333 398-541 (560)
153 PF03390 2HCT: 2-hydroxycarbox 63.4 2.3E+02 0.005 30.9 27.8 95 119-222 7-109 (414)
154 COG1906 Uncharacterized conser 60.7 2.3E+02 0.0049 30.0 16.4 121 205-335 256-381 (388)
155 PF13194 DUF4010: Domain of un 59.4 1.8E+02 0.004 28.5 12.6 24 250-273 25-48 (211)
156 PRK10519 hypothetical protein; 58.8 1.1E+02 0.0024 28.5 10.2 37 426-462 20-57 (151)
157 COG1620 LldP L-lactate permeas 54.5 3.6E+02 0.0077 30.3 16.6 134 190-333 363-506 (522)
158 PRK09921 permease DsdX; Provis 44.8 4.6E+02 0.01 28.8 22.3 74 197-271 297-375 (445)
159 COG3817 Predicted membrane pro 40.2 4.2E+02 0.0092 27.0 11.6 100 423-526 160-274 (313)
160 PRK10519 hypothetical protein; 38.6 2E+02 0.0044 26.8 8.6 65 207-273 25-90 (151)
161 TIGR00825 EIIBC-GUT PTS system 35.8 51 0.0011 33.9 4.4 57 430-486 188-249 (331)
162 COG2271 UhpC Sugar phosphate p 30.1 1.7E+02 0.0038 32.0 7.5 124 207-342 64-206 (448)
163 COG1283 NptA Na+/phosphate sym 28.1 1.9E+02 0.0042 32.5 7.7 83 434-518 12-99 (533)
164 TIGR00869 sec62 protein transl 27.7 1.7E+02 0.0037 29.3 6.5 35 107-141 107-141 (232)
165 TIGR01013 2a58 Phosphate:Na+ S 27.7 2.7E+02 0.0058 30.5 8.8 92 426-519 66-158 (456)
166 PF12056 DUF3537: Protein of u 27.0 35 0.00075 36.6 1.6 40 91-143 342-381 (398)
167 COG3493 CitS Na+/citrate sympo 24.4 9.3E+02 0.02 26.1 24.9 65 118-186 23-95 (438)
168 PF01350 Flavi_NS4A: Flaviviru 23.4 4.1E+02 0.0089 24.7 7.6 82 100-185 30-114 (144)
169 COG3732 SrlE Phosphotransferas 22.4 87 0.0019 31.9 3.3 99 419-521 178-286 (328)
170 COG4402 Uncharacterized protei 21.8 42 0.00092 34.9 1.0 23 87-110 311-333 (457)
171 KOG2563 Permease of the major 21.2 4.6E+02 0.01 29.1 8.7 79 99-180 21-119 (480)
No 1
>PLN00137 NHAD transporter family protein; Provisional
Probab=100.00 E-value=1.4e-51 Score=440.40 Aligned_cols=392 Identities=84% Similarity=1.278 Sum_probs=314.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHH
Q 045863 144 QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVD 223 (537)
Q Consensus 144 ~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~ 223 (537)
+...++++|+++|.++++|+.++++++++++.++.++|+++.++..+.+++++.+++.+.++.+++++++|+|+++++++
T Consensus 4 ~~~~~~~if~~~y~~i~~e~~~~i~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~g~m~iv~~l~ 83 (424)
T PLN00137 4 QGLAMALVFGAGYAGIIFEESLAFNKSGVALLMAVSLWVIRAIGAPSLEIVTLELRHALAEVSEIVFFLLGAMTIVEIVD 83 (424)
T ss_pred chhHHHHHHHHHHHHHHHcchhhhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999995555999999999999999987753334567777778777888899999999999999999
Q ss_pred HhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhC-CChhHHHHHHHHHHHHHhhcccccccc
Q 045863 224 AHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLV-PPSEYRKLLGAVVVIAANAGGAWTPIG 302 (537)
Q Consensus 224 ~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~-~p~~~~~~~l~~va~aan~Gg~~TpiG 302 (537)
++|++|++++++.+++++++++.++++++++|+|++|++++++|.|++.++. ++++. ...++.++++||+||++||+|
T Consensus 84 ~~g~f~~~a~~~~~~~~~~l~~~~~~~~~~lS~~l~N~tt~l~~~p~~~~~~~~~~~~-~~~~~~~~~aaNiGg~~TpiG 162 (424)
T PLN00137 84 AHQGFKLVTDSITTRSPRTLLWVVGFITFFLSSILDNLTTTIVMVSLLRKLVPPSEYR-KLLGAVVVVAANAGGAWTPIG 162 (424)
T ss_pred HcCcHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch-HHHHHHHHHhccccceeccCC
Confidence 9999999999998889999999999999999999999999999999987772 22221 122567899999999999999
Q ss_pred chhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hccccCCCcCCccccccccCCchhHHHHHHHHHHHHHHHH
Q 045863 303 DVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSEVNGKGQESSNVLASEQMAPRGQLVFAVGIGALIFVPV 381 (537)
Q Consensus 303 ~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~~lill~i 381 (537)
||||+++++.++++|.||+..+.||.+++.++.+.++++ +|+..+. +...+.+++++.+++++....+++.++++..+
T Consensus 163 np~NllI~~~~~lsf~~f~~~l~~P~li~~lv~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~i~~~~~~~~ 241 (424)
T PLN00137 163 DVTTTMLWIHGQISTLPTMQGLFLPSAVSLAVPLALMSLTSEENGSP-QDSSPLLASEQMAPRGQLVFGVGVGALLFVPV 241 (424)
T ss_pred CcCeeeehccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCh-hhccccchhhhcccHHHHHHHHHHHHHHHHHH
Confidence 999999999889999998889999998887766665655 3432211 11111123344455555554444444433336
Q ss_pred HhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhh
Q 045863 382 FKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAH 461 (537)
Q Consensus 382 ~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~ 461 (537)
++...|+|+.++++.++.++++....++++++++++.+++|+++++||++++||+|+|+++++++++|+.+++++.+...
T Consensus 242 ~~~~~gl~~~~~al~~~~~lll~~~~~~~~~~~~~~~~~~~~l~~Vdw~tLlfF~GlFilvgal~~tG~~~~la~~l~~~ 321 (424)
T PLN00137 242 FKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQALKVPQALSRIDTQGILFFLGILLSVGSLDAAGILRELANYLDAN 321 (424)
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHhCCccHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHh
Confidence 67778999999999888777665422222223344579999999999999999999999999999999999999999776
Q ss_pred hhhhHHHHHHHHHHHHhHchHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCcccC
Q 045863 462 ISNIDLIASAIGVVSAVIDNVPLVAATMGMYDLTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDFF 537 (537)
Q Consensus 462 i~~~~~i~~i~~~lS~~isNtp~va~llpv~~~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f~ 537 (537)
.++...+.++++++||++||+|.++++.|++...+.+...+.|+++++|+|+|||+|++||.||++++|..|.+|+
T Consensus 322 ~~~~~~i~~~s~ilS~~IsNVP~~~~~~p~~~~~~~~~~~~~w~aLalga~lGGn~tliGS~Anvi~~~~~~~~~~ 397 (424)
T PLN00137 322 IPNVELIASAIGVASAIIDNVPLVAATMGMYDLTDYPMDSELWQLIALCAGTGGSLLVIGSAAGVAFMGMEKVDFF 397 (424)
T ss_pred cCCchhHHHHHHHHHHHhcchHHHHHHhhhhhhccCCcchHHHHHHHHHhCccchHHHHHHHHHHHHHHHhhhhhh
Confidence 6554567888999999999999999999997533333235789999999999999999999999999999988774
No 2
>TIGR00775 NhaD Na+/H+ antiporter, NhaD family. These proteins are members of the NhaD Na+:H+ Antiporter (NhaD) Family (TC 2.A.62). A single member of the NhaD family has been characterized. This protein is the NhaD protein of Vibrio parahaemolyticus which has 12 GES predicted transmembrane regions. It has been shown to catalyze Na+/H+ antiport, but Li+ can also be a substrate.
Probab=100.00 E-value=6.3e-49 Score=419.75 Aligned_cols=378 Identities=44% Similarity=0.778 Sum_probs=298.0
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHh-hhhhccchhHHHHHHHHHHHHHHHHH
Q 045863 146 LAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSEL-SRASAEVSEIVFFLLGAMTIVEIVDA 224 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~-~~~ls~~~~~I~li~g~~ii~~~l~~ 224 (537)
...+++|+++|.++++|+.++++++.++++++.++++++.. +.+|+...+ .++..++.+++++++|+|++++.+++
T Consensus 4 ~~~~~if~~~y~~i~~e~~~~~~r~~~al~ga~~~~~~~~~---~~~~~~~~~~~~~~~d~~~ti~~LfgmMiiv~~l~~ 80 (420)
T TIGR00775 4 FQLCLLFLFGYLTIVFEHIVRVNKSAIWLAMGGLMWLVCFS---HIPDVDHAALEEEIADMAQVIFFLFVAMAIVELIDA 80 (420)
T ss_pred HHHHHHHHHHHHHHHhcchhhhccHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999555599999999999999999986 445551111 12233456999999999999999999
Q ss_pred hChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh--CCChhHHHHHHHH--HHHHHhhcccccc
Q 045863 225 HQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL--VPPSEYRKLLGAV--VVIAANAGGAWTP 300 (537)
Q Consensus 225 tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l--~~p~~~~~~~l~~--va~aan~Gg~~Tp 300 (537)
+|.+++++.++.+++.+++++.++++++++|+|++|+++++++.|+..++ .+|.+. +++ ++++||+||++||
T Consensus 81 ~g~f~~la~~l~~~s~r~Ll~~l~l~t~~lSa~LdN~tt~ll~~Pv~l~i~~~~~~~~----ll~~~i~~AANiGG~~Tp 156 (420)
T TIGR00775 81 HKGFSALVAWCVGKSRKKLLWLLGFLSFFLSAALDNLTSIIIIISILKRLVKAREDRL----LLGAICVIAVNAGGAWTP 156 (420)
T ss_pred CCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccCCccc----hHHhHHHHhcccccceee
Confidence 99999999999877779999999999999999999999999999998777 344443 344 8999999999999
Q ss_pred ccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hccccCCCcCCccccccccCCchhHHHHHHHHHHHHHH
Q 045863 301 IGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSEVNGKGQESSNVLASEQMAPRGQLVFAVGIGALIFV 379 (537)
Q Consensus 301 iG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~~lill 379 (537)
+|||||+++++.++++|.|++....||+++++++++.++++ +|+.... +..++.+++...+++++... ++++.++..
T Consensus 157 IGdP~Ni~i~~~~~i~f~~f~~~l~~p~li~l~v~~~il~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~-l~~~~~l~~ 234 (420)
T TIGR00775 157 LGDVTTTMLWINGKIRFSGIIMPLFVPSLVCVVVAGFCGQLFLPKRKPN-TIHEDVELKRALPKSRRIVL-LGVGSLLMV 234 (420)
T ss_pred CCCcchhHhHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-ccccccccccchhhhHHHHH-HHHHHHHHH
Confidence 99999999999889999988889999999887777666655 4442111 11111111111112222222 233333334
Q ss_pred HHHhhhcCCChHHHHHHHHHHHHHHhhhccccchh-hccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 045863 380 PVFKALTGLPPYMGILLGLGVLWILTDAIHYGESE-RQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYL 458 (537)
Q Consensus 380 ~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~-~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l 458 (537)
..++..+++++.+++++++.+++++++.+++++++ |++.+++|+++++||++++||+|+|+++++++++|+.+++++.+
T Consensus 235 f~~~~~~~l~~~~~al~~~~~lll~~~~l~~~~~~~~~~~~~~~~l~~VDw~tLlfF~GlFilvg~l~~~G~l~~la~~l 314 (420)
T TIGR00775 235 PSWKAVLGFPPFMGALLGLGLVWLFSDWIHSPHGEKRLHLRVPHILTRIDISSLTFFIGILLAVNALSLLGYLEDVSNVM 314 (420)
T ss_pred HHHHhhcCccHHHHHHHHHHHHHHHHHHhhccccccccccCHHHHHHhCCccHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 56777889999999999998888876444433222 22568999999999999999999999999999999999999999
Q ss_pred HhhhhhhHHHHHHHHHHHHhHchHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 459 DAHISNIDLIASAIGVVSAVIDNVPLVAATMGMYDLTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 459 ~~~i~~~~~i~~i~~~lS~~isNtp~va~llpv~~~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
.+..+.. ...+.++++||++||+|.+++++|+... +...+.|+++++|+++|||+|++||.||+++.|.+|.+|
T Consensus 315 ~~~~~~~-~~~~~s~i~S~~IdNVP~va~~i~l~~~---~~~~~~w~aLalga~lGGn~tlIGS~Anvv~~~~~~~~~ 388 (420)
T TIGR00775 315 DTQFSRN-WAAVMVGLLSSVLDNVPLVAATLGMYPL---PMSDGLWKLIAYTAGTGGSILIIGSAAGVALMGAEKVQF 388 (420)
T ss_pred HHhcCcc-hHHHHHHHHHHHhccHHHHHHHHHhccc---cCchHHHHHHHHHHCccchhHHHHHHHHHHHHHHHHHHH
Confidence 8665533 3367888999999999999999998742 224579999999999999999999999999999998876
No 3
>COG1055 ArsB Na+/H+ antiporter NhaD and related arsenite permeases [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-45 Score=387.06 Aligned_cols=371 Identities=24% Similarity=0.338 Sum_probs=304.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHH
Q 045863 144 QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVD 223 (537)
Q Consensus 144 ~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~ 223 (537)
..+..+.+|..+++.++.++ +|+++.++.|+.+++.+|+. +++|+..... ..++++++++|+|+++..++
T Consensus 4 ~~~~~l~~~~l~~~~~~p~~---~~~~~~a~~Ga~l~l~~giv---~~~d~~~~~~----i~~~~i~~l~~mmiiv~~l~ 73 (424)
T COG1055 4 LLALALFIFTLVYVLIRPRK---LPRAWAALLGALLALFLGIV---TPEDALVVIG----IDWNVILLLLGMMIIVLLLD 73 (424)
T ss_pred HHHHHHHHHHHHHHhhhcCc---CchHHHHHHHHHHHHHHcCC---CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 35667777888888888877 99999999999999999987 8889887311 12399999999999999999
Q ss_pred HhChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhc
Q 045863 224 AHQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAG 295 (537)
Q Consensus 224 ~tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~G 295 (537)
++|+|++.+.++.+ ++++++++.+.++++++|+|++|+++++++.|+..++ .++.+ +++.+++++|+|
T Consensus 74 ~~G~Fe~~a~~~v~~s~g~~~~L~~~l~ll~a~~SA~l~N~tt~LlltPivl~~~~~~~~~~~p----~l~~~~f~aN~g 149 (424)
T COG1055 74 ESGFFEWLAIKMVKRSKGSGLKLLLLLVLLGALLSAFLDNDTTALLLTPIVLAVARALGVNPVP----FLIAEVFIANIG 149 (424)
T ss_pred HcCcHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHcccceeehhhhHHHHHHHHcCCCccH----HHHHHHHHHccc
Confidence 99999999999864 5699999999999999999999999999999997544 34444 478999999999
Q ss_pred cccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-h-cc-ccCCCcCCccccccccCCchhHHHHHHH
Q 045863 296 GAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-T-SE-VNGKGQESSNVLASEQMAPRGQLVFAVG 372 (537)
Q Consensus 296 g~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~-~~-~~~~~~~~~~l~~~~~i~~~~~~~~~l~ 372 (537)
|..||+|||+|++++...|++|.||...+.||.++++++.+.++++ + ++ .++..++.++.++++..++++....+..
T Consensus 150 g~~t~iGdp~niii~~~~gisF~~f~~~m~~p~l~~li~~~~vl~~~~~~~~~~~~~~~~~~~~~~~ai~~~~l~~~~~~ 229 (424)
T COG1055 150 GLATPVGDPPNIIIASAAGISFNDFLANMFPPSLISLIATLVVLYLLFRRKVIPERYDDLLLLDPREAIRDRALFKLSLV 229 (424)
T ss_pred ccccccCChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhcccChhcccccHHHHHHHHH
Confidence 9999999999999999999999999999999999998877766655 3 22 3333333334455566777766666654
Q ss_pred HHHHH-HHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHH
Q 045863 373 IGALI-FVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLL 451 (537)
Q Consensus 373 l~~li-ll~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~ 451 (537)
+++++ +....++.+++++..+++.++.++++... . +++.+.+++++++||++++||.|+|+++++++++|+.
T Consensus 230 vl~~vli~f~~~~~~~i~~~~val~~a~ill~~~~-~------~~~~~~~~il~~v~W~~l~Ff~Glfi~V~gl~~~Gv~ 302 (424)
T COG1055 230 VLALVLIAFLLLPFLGIPVSLVALVGAAILLLLAR-L------SPRESVNKILRGVEWSTLLFFIGLFIVVGGLENAGVT 302 (424)
T ss_pred HHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHhc-c------CcchhHHHhhhcCChHHHHHHHHHHHHHHHHHHcChH
Confidence 44333 44667778999999999999999888763 1 1112345699999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhh-----HHHHHHHHHHHHhHchHHHHHHHHhhhhcc-CC-CCChHHHHHHHHHHHHhhhhhHHhHHH
Q 045863 452 REIANYLDAHISNI-----DLIASAIGVVSAVIDNVPLVAATMGMYDLT-SF-PQDSKFWQLIAYCAGTGGSMLIIGSAA 524 (537)
Q Consensus 452 ~~la~~l~~~i~~~-----~~i~~i~~~lS~~isNtp~va~llpv~~~~-~~-~~~~~~~laLa~~a~iGg~lTpiGS~a 524 (537)
+.+++.+....+++ ..+.++++++|+++||.|.++++.|+.+.. .. +.....|+++++|+++|||+|++||+|
T Consensus 303 ~~la~~l~~~~~~~~~~~~~~~~~~s~~lSsv~~NvP~vl~~~~~i~~~~~~~~~~~~lw~A~a~Ga~lGgnlT~IGs~A 382 (424)
T COG1055 303 EDLASVLKALSSGGLAAATLGIGWLSGLLSSVLDNVPTVLTFAPIIKGLAANGMGKEPLWLALALGADLGGNLTPIGSAA 382 (424)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhccchHHHHHHHHHHhhcccccchHHHHHHHHHhCccccchhhhhhHH
Confidence 99999998877532 346899999999999999999999998532 11 112479999999999999999999999
Q ss_pred HHHHHhhcCcc
Q 045863 525 GVAFMGMEKVD 535 (537)
Q Consensus 525 n~i~~g~~~~~ 535 (537)
|++++|.++++
T Consensus 383 nlv~~~i~~~~ 393 (424)
T COG1055 383 NLVWLGVLERK 393 (424)
T ss_pred HHHHHHHHHHC
Confidence 99999998765
No 4
>PRK15445 arsenical pump membrane protein; Provisional
Probab=100.00 E-value=1.3e-42 Score=373.09 Aligned_cols=368 Identities=14% Similarity=0.098 Sum_probs=284.5
Q ss_pred HHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHH--HhhhhhccchhHHHHHHHHHHHHHHHHH
Q 045863 147 AMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVS--ELSRASAEVSEIVFFLLGAMTIVEIVDA 224 (537)
Q Consensus 147 ~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~--~~~~~ls~~~~~I~li~g~~ii~~~l~~ 224 (537)
.++++|++++++|++++ .++|.+++++++++++.++|++ +.+|+++ +++| +++++++|+|+++.+++|
T Consensus 2 ~~l~i~~~~~~~~~~~~-~~ip~~~~all~~~ll~~~gv~---~~~~a~~~~~~~~------~~i~l~~g~~vi~~~l~~ 71 (427)
T PRK15445 2 LAIAIFLLTLVLVIWQP-KGLGIGWSALLGAVLALLTGVV---SLGDVPVVWGIVW------NATLTFIAIIIISLLLDE 71 (427)
T ss_pred HHHHHHHHHHHHHhccc-CCCChHHHHHHHHHHHHHHcCC---CHHHHHHHHHhcc------cHHHHHHHHHHHHHHHHH
Confidence 46889999999999987 3689999999999999999986 8888875 3444 999999999999999999
Q ss_pred hChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhcc
Q 045863 225 HQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGG 296 (537)
Q Consensus 225 tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg 296 (537)
+|++||+++++.+ ++++++.+.+++.++++|+|++|+++++++.|++..+ .+|++. ..+++..++++|.|+
T Consensus 72 tGl~~~ia~~~~~~~~~~~~~l~~~~~~~~~~ls~~~sn~~~~~i~~Pi~~~i~~~~g~~~~~~-~~~~~~~~~~a~~~~ 150 (427)
T PRK15445 72 AGFFEWAALHVARWAKGNGRKLFVYIVLLGAAVAALFANDGAALILTPIVLAMLLALGFSKKAT-LAFVMAAGFIADTAS 150 (427)
T ss_pred hCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCcccc-hHHHHHHHHHhcccc
Confidence 9999999999864 4678899999999999999999999999999997443 344332 235678889999999
Q ss_pred ccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hcc-ccCCCcCCcccccc-ccCCchhHHHHHH-H
Q 045863 297 AWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSE-VNGKGQESSNVLAS-EQMAPRGQLVFAV-G 372 (537)
Q Consensus 297 ~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~-~~~~~~~~~~l~~~-~~i~~~~~~~~~l-~ 372 (537)
..|++|+|+|++..+..+++|.||++++.|+.++.+++.+.++++ +|| .+++.+ .++.++. ...++++...... +
T Consensus 151 ~~~~ig~~~N~i~~~~~~i~f~d~~~~~~p~~ii~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 229 (427)
T PRK15445 151 LPLVVSNLVNIVSADYFGIGFAEYASVMVPVNLVSLAASLLVLWLYFRKDIPKTYD-LELLKEPASAIKDPALFKLGWIV 229 (427)
T ss_pred cccccCCchHhhhhccCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCcccc-cccccChhhhccCHHHHHHHHHH
Confidence 999999999988877779999999999999999888766665554 444 322211 1111111 1122222222222 2
Q ss_pred HHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHH
Q 045863 373 IGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLR 452 (537)
Q Consensus 373 l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~ 452 (537)
++.+++.|++.+.++++.+.++++++.++++... .++..+|||+.+++||++++|++|++.++++++++|+.+
T Consensus 230 ~~~~~~~~~~~~~l~i~~~~va~~~a~ll~~~~~-------~~~~~~~~~~~~~v~W~~l~~~~g~~~l~~al~~tG~~~ 302 (427)
T PRK15445 230 LALLLVGYFVLEPLGIPVSAIAGVGALILLLVAR-------RGHAINTKKVLKGAPWQIVIFSLGMYLVVYGLRNAGLTD 302 (427)
T ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHh-------ccCCCCHHHHHHhCChHHHHHHHHHHHHHHHHHHcCHHH
Confidence 2233345667777899999999999888777541 012468999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhH-----HHHHHHHHHHHhHchHHHHHHHHhhhhcc-CCCC-ChHHHHHHHHHHHHhhhhhHHhHHHH
Q 045863 453 EIANYLDAHISNID-----LIASAIGVVSAVIDNVPLVAATMGMYDLT-SFPQ-DSKFWQLIAYCAGTGGSMLIIGSAAG 525 (537)
Q Consensus 453 ~la~~l~~~i~~~~-----~i~~i~~~lS~~isNtp~va~llpv~~~~-~~~~-~~~~~laLa~~a~iGg~lTpiGS~an 525 (537)
|+++.+.+..+.+. .+.+++.++|+|+||+|.++++.+..... ..+. +...++++++|+++|||+||+||+||
T Consensus 303 ~la~~l~~~~~~~~~~~~~~~~~~s~~lS~~~sN~p~~~~~~~~i~~~~~~~~~~~~l~~al~~ga~~gg~~T~iGs~an 382 (427)
T PRK15445 303 YLAGVLNYLADQGLFAATLGTGFLAAFLSSVMNNMPTVLIGALAIDGSNATGVIKEAMIYANVIGSDLGPKITPIGSLAT 382 (427)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhccCCcchHHHHHHHHHHhcccCcccchhhhHHH
Confidence 99999976543322 24678899999999999998765444321 1111 34678889999999999999999999
Q ss_pred HHHHhhcC
Q 045863 526 VAFMGMEK 533 (537)
Q Consensus 526 ~i~~g~~~ 533 (537)
.++.+..+
T Consensus 383 ~i~~~~~~ 390 (427)
T PRK15445 383 LLWLHVLA 390 (427)
T ss_pred HHHHHHHH
Confidence 98776643
No 5
>PLN00136 silicon transporter; Provisional
Probab=100.00 E-value=1.1e-42 Score=377.08 Aligned_cols=363 Identities=19% Similarity=0.229 Sum_probs=278.4
Q ss_pred HHHHHHHHHHHHHHHhhc-ccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHH
Q 045863 146 LAMALLFGIGYTGIIFEE-SLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDA 224 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~-~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~ 224 (537)
+..++++..++.++.-.. .++++++.+++++++++.++|++ +++|+++.+++ +++++++|+|+++.++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~l~i~~~~~Allga~llll~g~~---~~~~a~~~i~~------~tl~ll~gmmii~~~L~~ 81 (482)
T PLN00136 11 LGSLAFGVFWMLAVFPSVPFLPIGRTAGALLSAVLMIVFHVI---SPDDAYASIDL------PILGLLFATMVVGSYLKN 81 (482)
T ss_pred hHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHhCCC---CHHHHHHhCCc------hHHHHHHHHHHHHHHHHH
Confidence 344555555555543332 56678899999999999888876 89999988776 999999999999999999
Q ss_pred hChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhccc
Q 045863 225 HQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGGA 297 (537)
Q Consensus 225 tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg~ 297 (537)
+|++++++.++.+ ++++++.+.++++++++|+|++|++++++|.|++.++ .+|.+ +++.++++||+||.
T Consensus 82 tG~~~~ia~~l~~~~~~~~~ll~~l~~~ta~lSafl~N~~t~llm~Piv~~la~~~~~~p~~----~ll~la~aAn~Gg~ 157 (482)
T PLN00136 82 AGMFKHLGRLLAWRSQGGRDLLCRVCVVTALASALFTNDTCCVVLTEFVLELAAERNLPAKP----FLLALASSANIGSS 157 (482)
T ss_pred cCHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHcCCCcHH----HHHHHHHHHHHhhh
Confidence 9999999998864 3678888999999999999999999999999997554 34433 46799999999999
Q ss_pred cccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hcc-ccCCCcC---------------C--------
Q 045863 298 WTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSE-VNGKGQE---------------S-------- 352 (537)
Q Consensus 298 ~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~-~~~~~~~---------------~-------- 352 (537)
.||+|+|+|+++++..+++|.||++.+.|+.++++++.+.++++ ||+ ++.+.+. +
T Consensus 158 ~TpiG~p~Nlii~~~~~i~F~dF~~~~~P~~li~l~v~~~~l~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (482)
T PLN00136 158 ATPIGNPQNLVIAFNSKITFPKFLLGILPAMLAGMAVNMVMLLCMYWKDLDGGAELSVDGKQMEAVEEGRSPASAKSTKQ 237 (482)
T ss_pred hhhccccchheeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcccchhhhhhhcccccchhhhhhh
Confidence 99999999999998889999999999999999888876665544 333 3211110 0
Q ss_pred ------------------cccc-cccc----------CCchhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHH
Q 045863 353 ------------------SNVL-ASEQ----------MAPRGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWI 403 (537)
Q Consensus 353 ------------------~~l~-~~~~----------i~~~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll 403 (537)
.+.. +..+ .++++.....+...++ +..+.....|+|+.+++++++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ll~~~~~~~v~-~~~l~~f~~g~p~~~iAl~~a~~lll 316 (482)
T PLN00136 238 QSPALLQAGLNGDGNGDMSSMMSENISTKHPWFMQCTEHRRKLFLKSFAYVVT-VGMVVAYMVGLNMSWTAITTAIALVV 316 (482)
T ss_pred hhhhhhhccccccccchhHHHhhccccccccccccchhccHHHHHHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 0000 0000 2233333222211111 11111223789999999999988877
Q ss_pred HhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH-----HHHHHHHHHHHh
Q 045863 404 LTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID-----LIASAIGVVSAV 478 (537)
Q Consensus 404 ~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~-----~i~~i~~~lS~~ 478 (537)
.+. .+.+|+++++||++++||+|+|+++++++++|+.+++++.+....+.+. .+.++++++|++
T Consensus 317 ~~~-----------~~~~~~l~~v~W~~Llff~GlFilv~~l~~tGl~~~i~~~l~~~~~~~~~~~~~~~~~~s~~lS~~ 385 (482)
T PLN00136 317 VDF-----------RDAEPCLDTVSYSLLVFFSGMFITVSGFNKTGLPGAIWNFMAPYSKVNSVGGISVLSVIILLLSNL 385 (482)
T ss_pred hcC-----------CCHHHHHHhCCCcHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH
Confidence 752 3678999999999999999999999999999999999999887654332 346788999999
Q ss_pred HchHHHHHHHHhhhhcc----CCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcC
Q 045863 479 IDNVPLVAATMGMYDLT----SFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEK 533 (537)
Q Consensus 479 isNtp~va~llpv~~~~----~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~ 533 (537)
+||+|.+++|.|+.... +.+.....|+++++++++|||+|++||++|+++.+.++
T Consensus 386 isNvp~~~~m~p~v~~~~~~~~~~~~~~~~~~la~ga~lGGn~TliGs~ANli~~~~~~ 444 (482)
T PLN00136 386 ASNVPTVLLMGDEVAAAAALISPAAVTRSWLLLAWVSTVAGNLSLLGSAANLIVCEQAR 444 (482)
T ss_pred hccHHHHHHHHHHHHHHhcccCCcccchHHHHHHHHHhhccceeeccchhHHHHHHHHH
Confidence 99999999999987421 11112468888999999999999999999999999854
No 6
>cd01118 ArsB_permease Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in eubacteria and archaea. A typical ArsB permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump (ArsAB). The ArsAB complex is similar in many ways to ATP-binding cassette transporters, which have two groups of six transmembrane-spanning helical segments and two nucleotide-binding domains. The ArsB proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life.
Probab=100.00 E-value=2.3e-41 Score=361.99 Aligned_cols=365 Identities=17% Similarity=0.155 Sum_probs=277.1
Q ss_pred HHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhCh
Q 045863 148 MALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQG 227 (537)
Q Consensus 148 ~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl 227 (537)
++++|+.++++|++|+ .++|.++++++++.++.++|++ +.+|+++++. ..++++++++|+|+++.+++|+|+
T Consensus 2 ~l~i~~~~i~l~~~~~-~~i~~~~~al~~~~ll~~~gv~---~~~~~~~~~~----~~~~~i~~~~g~~~i~~~l~~tGl 73 (416)
T cd01118 2 AIAIFVLTLVLVIWRP-FGLPEAVWAVLGAVIALILGLV---SPHDALEVWG----IVWDVTLTLIGVILLSLLLDEEGF 73 (416)
T ss_pred HHHHHHHHHHHHHHcc-CCCChHHHHHHHHHHHHHHCCC---CHHHHHHHHh----cchhHHHHHHHHHHHHHHHHHcCH
Confidence 5789999999999985 3489999999999999999986 8889887642 013999999999999999999999
Q ss_pred HHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhccccc
Q 045863 228 FKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGGAWT 299 (537)
Q Consensus 228 ~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg~~T 299 (537)
+||+++++.+ ++++++.+.+++++.++|+|++|+++++++.|++.++ .+|++ ...+++..++++|.||..|
T Consensus 74 ~~~ia~~l~~~~~~~~~~l~~~~~~~~~~ls~~~sn~a~~~~~~Pi~~~i~~~~g~~~~~-~~~~l~~~~~~a~~g~~~t 152 (416)
T cd01118 74 FEWVAALAARWARGSGRKLFTLIVLLGAAVTAFFANDGTALILTPIVIALLRALGAKKNR-TLPFLYACAFIADAASLPL 152 (416)
T ss_pred HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCccc-ccHHHHHHHHHHccccccc
Confidence 9999998854 5788999999999999999999999999999997544 24422 1235678889999999999
Q ss_pred cccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hcc-ccCCCcCCccccccccCCchhHHHHHHHHHHH-
Q 045863 300 PIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSE-VNGKGQESSNVLASEQMAPRGQLVFAVGIGAL- 376 (537)
Q Consensus 300 piG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~-~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~~l- 376 (537)
|+|+|+|+++.+..+++|.||++.+.|+.++++++.+.++++ +|+ .+++.+..+..++..+.++++.....+.++.+
T Consensus 153 pig~~~n~i~~~~~~i~~~~~~~~~~p~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 232 (416)
T cd01118 153 PISNLVNIVTAGYFGIGFTEYAALMFLPSIVSILATYVVLYLFFRRALPKRLETASVKKPSLAIKDPLLFGLAWTLLVLL 232 (416)
T ss_pred ccCCchHHHhHhccCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcccccccccccCccccccchHHHHHHHHHHHHH
Confidence 999999999888889999999999999999888766665554 443 32221111111111122222222232222222
Q ss_pred HHHHHHhhhcCCChHHHH-HHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHH
Q 045863 377 IFVPVFKALTGLPPYMGI-LLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIA 455 (537)
Q Consensus 377 ill~i~~~~~gi~~~~va-liga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la 455 (537)
+..++..+.++.++...+ ++++.++++.+. ++.++|+|+.+++||+++++|+|+|.++++++++|+.+|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~v~w~~ll~f~g~f~l~~al~~tG~~~~l~ 304 (416)
T cd01118 233 VVSAFGVDILLIPPSFIAGVLALIFLLLARR--------GGAINPLKVLKEAPWGVLLFSLGLYVVVFGLKNAGLTAILA 304 (416)
T ss_pred HHHHHhcccccccHHHHHHHHHHHHHHHHcC--------CCCCCHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 123444455666555444 444444444331 12468999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhH-----HHHHHHHHHHHhHchHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHh
Q 045863 456 NYLDAHISNID-----LIASAIGVVSAVIDNVPLVAATMGMYDLTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMG 530 (537)
Q Consensus 456 ~~l~~~i~~~~-----~i~~i~~~lS~~isNtp~va~llpv~~~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g 530 (537)
+.+.+..+.+. .+.+++.++||++||+|.+.++.|+... +.+ +...|+++++|+++|||+||+||++|+++++
T Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~vls~~isNvp~~~l~~p~~~~-~~~-~~~~~~~l~~g~~~gg~~t~~gs~an~i~~~ 382 (416)
T cd01118 305 DLLNWLVSQGLLAAILGVGLLAAFLSNVMNNLPAVLIGALALAA-GHA-PEALVYANLIGVDLGPKLTPIGSLATLLWLH 382 (416)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHhc-ccc-cHHHHHHHHHhcccCcccchHHHHHHHHHHH
Confidence 99987554332 2456889999999999999999998742 122 4568899999999999999999999999876
Q ss_pred h
Q 045863 531 M 531 (537)
Q Consensus 531 ~ 531 (537)
.
T Consensus 383 ~ 383 (416)
T cd01118 383 V 383 (416)
T ss_pred H
Confidence 5
No 7
>PF00939 Na_sulph_symp: Sodium:sulfate symporter transmembrane region; InterPro: IPR001898 Integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. One of these families currently consists of the following proteins: Mammalian sodium/sulphate cotransporter []. Mammalian renal sodium/dicarboxylate cotransporter [], which transports succinate and citrate. Mammalian intestinal sodium/dicarboxylate cotransporter. Chlamydomonas reinhardtii putative sulphur deprivation response regulator SAC1 []. Caenorhabditis elegans hypothetical proteins B0285.6, F31F6.6, K08E5.2 and R107.1. Escherichia coli hypothetical protein yfbS. Haemophilus influenzae hypothetical protein HI0608. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0640. Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ0672. These transporters are proteins of from 430 to 620 amino acids which are highly hydrophobic and which probably contain about 12 transmembrane regions.; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=100.00 E-value=4.6e-42 Score=373.20 Aligned_cols=395 Identities=18% Similarity=0.192 Sum_probs=313.2
Q ss_pred hhHHHHHHHHHHHHhhhhhccCchhhH-HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCC--HHH
Q 045863 117 DLLKALAVFAAAITGAVAINHSWVAAN-QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPS--TEI 193 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~p~g~~-~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~--~~~ 193 (537)
+++++++.+++.+. +++.|.|++++ +++..+++|+.++++|++|+ +|.++++++..+++.+++.. .+ .++
T Consensus 3 ~~~~~~~~~~i~~~--i~~lp~p~~l~~~~~~~l~i~~~~ii~w~te~---iP~~vtal~~~~l~~~~~~~--~~~~~~~ 75 (471)
T PF00939_consen 3 KWIKLIIALAIFLI--IWLLPAPEGLSPQGMRCLAIFLFAIILWITEA---IPLPVTALLIIILLPVLGGV--DPVAAKE 75 (471)
T ss_pred cHHHHHHHHHHHHH--HHHhcccccCCHHHHHHHHHHHHHHHHHHcCC---CChHHHHHHHHHHHHHHhcc--ccccHHH
Confidence 45555555555554 79999999999 79999999999999999999 99999999999999777754 12 488
Q ss_pred HHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHH--HHH
Q 045863 194 AVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTI--VMV 268 (537)
Q Consensus 194 a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~--im~ 268 (537)
+++++.+ +++|+++|+|+++.+++|||+.||+++++.+ ++++++.+.+++...+++.++++++++. ++.
T Consensus 76 ~~s~f~s------~~v~li~g~f~i~~al~ktgL~~Ria~~~l~~~g~~~~~l~~~~~~~~~~l~~~~ps~~a~~~~i~~ 149 (471)
T PF00939_consen 76 AFSGFGS------PTVWLIIGGFIIGAALEKTGLDKRIALWLLKRFGGSPKGLLFAIMLAGLLLSFFIPSTTARAAPILL 149 (471)
T ss_pred HHHHHcC------cHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhCCchheehhHhhHHHHHHhccCccHHHHHHHHHH
Confidence 8877654 9999999999999999999999999998854 6888899999999999999999888873 455
Q ss_pred HHHHHh-----CCChh-----HHHHHHHHHHHHHhhccccccccchhhhhhHhc------ccCChHHHHHHhhHHHHHHH
Q 045863 269 SLLRKL-----VPPSE-----YRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIH------GQISTLPTMKSLFIPSAVSL 332 (537)
Q Consensus 269 PI~~~l-----~~p~~-----~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~------~~isf~~~~~~~~pp~lv~l 332 (537)
|+++.+ .++++ ..+.+++.++++++.||..|++|+++|.+..+. .+++|.||+.++.|++++.+
T Consensus 150 pi~~~i~~~~~~~~~~~~~~~~~~~l~l~~~~~a~~~g~~~~~g~~~n~i~~~~l~~~~g~~isf~~w~~~~~p~~ii~~ 229 (471)
T PF00939_consen 150 PILLSICEALGSKPSSKTPRNLGKALMLGIAFAASIGGMGTLTGSAPNLIAAGFLESATGISISFLDWFIYALPPGIIML 229 (471)
T ss_pred HHHHhhhhcccchhhhhHHHHHHHHHHHHHhhhccccccccccCCCchHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHH
Confidence 998765 12222 223356788999999999999999999887662 36999999999999998877
Q ss_pred HHHHHHHHh-hccccCCC-cC----CccccccccCCchhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhh
Q 045863 333 AVPLAFLSL-TSEVNGKG-QE----SSNVLASEQMAPRGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTD 406 (537)
Q Consensus 333 ~v~~~ll~~-~~~~~~~~-~~----~~~l~~~~~i~~~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~ 406 (537)
++.+.+.++ +||.+++. +. .+|.++.++++++|+....++++++ ++|++.+.+|++.+.++++++.++++.+
T Consensus 230 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lg~~s~~Ek~~~~i~~~~i-~lw~~~~~~~i~~~~va~~~~~ll~~~~- 307 (471)
T PF00939_consen 230 VLMWLILYKLFKPDVKNLPDGKEFIKKELKELGPMSKKEKKVLVIFLLTI-LLWITESFHGIDPAIVALLGAVLLFLPG- 307 (471)
T ss_pred HHHHHHHHHHhccccccchhhHHHHHHHHHhcCCCchhHhhhhhhhhhhh-hcccCcccCCCCHHHHHHHHHHHHHHHH-
Confidence 766655655 55532221 11 2245677889888887776655555 6799999999999999999999998887
Q ss_pred hccccchhhccCCHHHHh-hcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhh-hhH-H-----HHHHHHHHHHh
Q 045863 407 AIHYGESERQKLKVPQAL-SRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHIS-NID-L-----IASAIGVVSAV 478 (537)
Q Consensus 407 vl~~~~~~~~~i~~~~~l-~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~-~~~-~-----i~~i~~~lS~~ 478 (537)
+ ++|||.. +++||+++++++|.+.++.+++++|+.+|+++.+.+.++ .++ . +.+...+.+++
T Consensus 308 i----------l~~~d~~~~~i~W~~l~~~~g~~~lg~~l~~sG~~~~la~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~ 377 (471)
T PF00939_consen 308 I----------LTWKDAAQKKIPWGTLFLFGGALSLGTALEKSGAAKWLANVLLPLLGGLSPFLVVLVILLVTVLLLTNF 377 (471)
T ss_pred h----------ccHHHHHhcCCCchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHh
Confidence 3 4899855 689999999999999999999999999999999999886 222 1 12233567899
Q ss_pred HchHHHHHHHHhhhh-c-cCC-CC-ChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 479 IDNVPLVAATMGMYD-L-TSF-PQ-DSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 479 isNtp~va~llpv~~-~-~~~-~~-~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
++|+++++++.|+.. . .+. +. +....+.++++++.++.++|+++++|.+.+|.++++.
T Consensus 378 ~s~~a~~~il~Pi~~~~a~~~~g~~p~~~~l~~~~~~~~~~~~lP~~sp~~~i~~~~g~~~~ 439 (471)
T PF00939_consen 378 MSNTATVAILIPIVISLAAALGGINPLALALIVAFASSFAGFLLPYSSPPNAIAYGTGYYKF 439 (471)
T ss_pred cCcHHHHHHHHHHHHHHhhhccCCChHHHHHHHHHHhhhccccCCcCCcceeEEEcCCCCCH
Confidence 999999999999873 2 222 22 3334445566677767899999999999999987763
No 8
>TIGR00935 2a45 arsenical pump membrane protein.
Probab=100.00 E-value=1.5e-39 Score=349.37 Aligned_cols=361 Identities=13% Similarity=0.080 Sum_probs=269.0
Q ss_pred HHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHH--HhhhhhccchhHHHHHHHHHHHHHHHHH
Q 045863 147 AMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVS--ELSRASAEVSEIVFFLLGAMTIVEIVDA 224 (537)
Q Consensus 147 ~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~--~~~~~ls~~~~~I~li~g~~ii~~~l~~ 224 (537)
.++++|+.++++|++|+ +++|.+++++.+++++.++|++ +.+|+.+ +++| +++++++|+|+++.+++|
T Consensus 3 ~~l~i~~~~~~l~~~~~-~~~~~~~~~~~~~~l~~l~g~~---~~~~~~~~~~~~~------~~l~~~~g~~ii~~~l~~ 72 (429)
T TIGR00935 3 LAGAIFLLTYVLVIWQP-VGLTIGASASSGAALAILAGVV---SRPDIPTVWGIVW------NATATFFAVIIISLILDE 72 (429)
T ss_pred HHHHHHHHHHHHHHhee-cchHHHHHHHHHHHHHHHHhcC---CHHHHHHHHhhch------hHHHHHHHHHHHHHHHHH
Confidence 57899999999999998 3346666666666777778875 6666643 2333 999999999999999999
Q ss_pred hChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhcc
Q 045863 225 HQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGG 296 (537)
Q Consensus 225 tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg 296 (537)
+|++||+++++.+ ++++++.+.+++.++++|+|++|+++++++.|++.++ .+|++ +++.+++++|+||
T Consensus 73 tGl~~~ia~~l~~~~~~~~~~l~~~~~~~~~~ls~~~~n~~~~~i~~Pi~~~l~~~~~~~~~~----~~~~~~~~a~~gg 148 (429)
T TIGR00935 73 TGFFEWAAVHAYRLSNGRGWLLFTFICLLGAVVSAFFANDGAALILTPIVIAMCEVLGFNPRT----ILAFVVAAGFIAD 148 (429)
T ss_pred cCCHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHccchhhhhHHHHHHHHHHHhCCCCcc----hHHHHHHHHHHhh
Confidence 9999999998864 5789999999999999999999999999999997554 24433 2467899999999
Q ss_pred ccccccchhhhhhHhcc---cCChHHHHHHhhHHHHHHHHHHHHHHHh-hcc-ccCCCcCCccccccccCCchhHHHHHH
Q 045863 297 AWTPIGDVTTTMLWIHG---QISTLPTMKSLFIPSAVSLAVPLAFLSL-TSE-VNGKGQESSNVLASEQMAPRGQLVFAV 371 (537)
Q Consensus 297 ~~TpiG~~~Nll~~~~~---~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~-~~~~~~~~~~l~~~~~i~~~~~~~~~l 371 (537)
.+||+|+++|++..+.. +++|.||++.+.|++++.+++.+.++++ +|| .++..+.+.+.++++++++++......
T Consensus 149 ~~t~iG~~~n~i~~~~~~~~~i~f~~f~~~~~p~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (429)
T TIGR00935 149 TASLPLIVSNLVNIVSADYFGLGFAEYTSHMLPGNILVLVATLLVLRLYFRNDIPKVYDLELLLAPKYAIKDPALFKKCW 228 (429)
T ss_pred HHhcCCCCchhhhhhcccccCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHccCCcccchhhccCccccccCHHHHHHHH
Confidence 99999999999876533 7999999999999999988776655554 444 222211111122334445544333332
Q ss_pred -HHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcH
Q 045863 372 -GIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGL 450 (537)
Q Consensus 372 -~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~ 450 (537)
+++.++++|.+++.++++++..++.++.++++.... .+..+|||+.+++||+++++++|++.++++++++|+
T Consensus 229 ~v~~~~i~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~-------~~~~~~~~~~~~i~w~~l~~~~g~f~l~~~l~~tG~ 301 (429)
T TIGR00935 229 IVLVFLLVGFFVLEFLGIPVSAIAWIAALGAIALAIL-------ADAIDTEKVLRGAPWQIVLFSAGMYLVVEGLKNLGL 301 (429)
T ss_pred HHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHh-------cCCCCHHHHHHhCCcHHHHHHHHHHHHHHHHHHCCH
Confidence 222233467777778888777766666443332100 023689999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhH-----HHHHHHHHHHHhHchHHHHHHHHhhhh-c---cCCCC-ChHHHHHHHHHHHHhhhhhHH
Q 045863 451 LREIANYLDAHISNID-----LIASAIGVVSAVIDNVPLVAATMGMYD-L---TSFPQ-DSKFWQLIAYCAGTGGSMLII 520 (537)
Q Consensus 451 ~~~la~~l~~~i~~~~-----~i~~i~~~lS~~isNtp~va~llpv~~-~---~~~~~-~~~~~laLa~~a~iGg~lTpi 520 (537)
.+|+++.+....+.+. .+.++++++|+++||+| +++|+.. . .+.+. +...++++++++++||++||+
T Consensus 302 ~~~la~~~~~~~~~~~~~~~~~~~~~~~~ls~~~sN~~---~~~pi~~~i~~~~~~g~~~~~~~~~l~~~~~~gg~~tp~ 378 (429)
T TIGR00935 302 TEYLGGILNVLEDRGLWAAILGTGFVSAFLSSIMNNMP---TMLVGALSIDQSSATGLPKEPMVYANVIGADLGPKITPI 378 (429)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHccHH---HHHHHHHHHhhccccccchhHHHHHHHHHHhcCcccCcc
Confidence 9999995543322222 24667899999999999 3677652 1 12222 356788899999999999999
Q ss_pred hHHHHHHHHhh
Q 045863 521 GSAAGVAFMGM 531 (537)
Q Consensus 521 GS~an~i~~g~ 531 (537)
|+++|+++++.
T Consensus 379 gs~anli~~~~ 389 (429)
T TIGR00935 379 GSLATLLWLHV 389 (429)
T ss_pred ccHHHHHHHHH
Confidence 99999998764
No 9
>TIGR00785 dass anion transporter. Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+.
Probab=100.00 E-value=3.2e-39 Score=348.26 Aligned_cols=375 Identities=14% Similarity=0.117 Sum_probs=297.3
Q ss_pred cCchhhH-HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHH-HHHHHHHHhcCCCC---HHHHHHHhhhhhccchhHHHH
Q 045863 137 HSWVAAN-QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLM-AVSLWIVRSIGAPS---TEIAVSELSRASAEVSEIVFF 211 (537)
Q Consensus 137 ~~p~g~~-~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~-~~~l~v~gvi~~~~---~~~a~~~~~~~ls~~~~~I~l 211 (537)
|+|+|++ +.+..+++|+.++++|++|+ +|.+++++++ ++++.++|++ + .+++++++.+ +++|+
T Consensus 1 ~~~~~l~~~~~~~l~i~~~~i~~w~~~~---~~~~~~a~~~~~~~l~l~g~~---~~~~~~~~~~~~~~------~~v~l 68 (444)
T TIGR00785 1 PVPDGLNSGAWLLLAIFVAAIVGWILEP---LPLPVTALLAIPIIAVLLGVL---SAFKFKNALSGFAD------PTIWL 68 (444)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhCC---CcHHHHHHHHHHHHHHHhccC---CcchHHHHHHhcCC------cHHHH
Confidence 7899999 69999999999999999999 9999999996 8888888876 6 7788776655 99999
Q ss_pred HHHHHHHHHHHHHhChHHHHHHHHhc---C-CchHHHHHHHHHHHHHHhhccchh-HHHHHHHHHHHh-----CCC----
Q 045863 212 LLGAMTIVEIVDAHQGFKLVTDNITT---R-KPRTLLWVIGFVTFFLSSILDNLT-STIVMVSLLRKL-----VPP---- 277 (537)
Q Consensus 212 i~g~~ii~~~l~~tGl~~ria~~l~~---~-~~~~l~~~l~l~~~~lS~fl~N~t-a~~im~PI~~~l-----~~p---- 277 (537)
++|+|+++.+++|+|++||+++++.+ + +.+.+...+++.+.+.+.+.+|++ +++++.|++.++ .+|
T Consensus 69 ~~~~~~i~~al~~tGl~~~ia~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~sn~ar~~~i~~Pi~~~i~~~~g~~~~~~~ 148 (444)
T TIGR00785 69 FFGAFILATALVKTGLGKRIAYKLVGKMGGTTLGLGYFLVFLETLLAPMWPSNTARAGGILLPIIKSLLPLLGSKPEKSP 148 (444)
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHCCCChHHHHHHHHHHHHHHhhCchHhHhHHHHHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999999999998854 3 444555567777788888999999 889999997544 244
Q ss_pred hhHHHHHHHHHHHHHhhccccccccchhhhhhHhcc------cCChHHHHHHhhHHHHHHHHHHHHHHHh-hcc-ccCCC
Q 045863 278 SEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHG------QISTLPTMKSLFIPSAVSLAVPLAFLSL-TSE-VNGKG 349 (537)
Q Consensus 278 ~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~------~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~-~~~~~ 349 (537)
++..+.+++.+.+++|.||..||+|+++|+++.+.. +++|.||++.+.|+.+++.++.+.+.++ +|| .++..
T Consensus 149 ~~~~~~l~~~~~~~a~~g~~~t~~g~~~n~i~~~~~~~~~g~~i~~~~~~~~~~p~~ii~~~~~~~~~~~~~~~~~~~~~ 228 (444)
T TIGR00785 149 RKIGKYLMLGIAYSASIGSSGFLTGSAPNALAAGILSKILGIQISWGDWFLAGLPLGIILLLLVPLLLYVLFPPELKLKD 228 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhcCCCcCHHHHHHHHhHHHHHHHHHHHHHHHHHcCccccCCc
Confidence 222333557889999999999999999999887643 3899999999999888877766655554 443 22221
Q ss_pred cCC----ccccccccCCchhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh
Q 045863 350 QES----SNVLASEQMAPRGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS 425 (537)
Q Consensus 350 ~~~----~~l~~~~~i~~~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~ 425 (537)
+.. ++.++.++++++++..+.++++++ +.|+.+..+++|.++++++++.++++.+ .+++||..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~e~~~l~v~~~~i-~~~~~~~~~~~~~~~~al~~~~ll~~~g-----------~~~~~~~~~ 296 (444)
T TIGR00785 229 EVDLWAKEELEEMGPMSFREKALLGIFLLAL-LLWIFGGSLGINASVVALLAVVLMLFLG-----------IVTWKDIQK 296 (444)
T ss_pred cHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHcCCCCCCChHHHHHHHHHHHHHhC-----------cccHHHHhh
Confidence 111 123455677777776555444444 5677777778999999999988777665 258898888
Q ss_pred c-CChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhh-hh-H-----HHHHHHHHHHHhHchHHHHHHHHhhhh-c--
Q 045863 426 R-IDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHIS-NI-D-----LIASAIGVVSAVIDNVPLVAATMGMYD-L-- 494 (537)
Q Consensus 426 ~-v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~-~~-~-----~i~~i~~~lS~~isNtp~va~llpv~~-~-- 494 (537)
+ ++|+++++++|.+.++.+++++|+.+|+++.+.+..+ .+ . .+.+...+.++++||++++++++|+.. .
T Consensus 297 ~~v~w~~l~~~~g~~~l~~~l~~sG~~~~i~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~~~~i~~Pi~~~ia~ 376 (444)
T TIGR00785 297 NKVAWNTLILFGGLIGLAGGLKKSGFIKWFSEKLVGILDGLSPTIAVLVLVVLFYIILYFFASNTAHTAALVPIFFSVAS 376 (444)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 5 9999999999999999999999999999999988762 22 2 134667889999999999999999873 1
Q ss_pred -cCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 495 -TSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 495 -~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
.|.+ +..+++++++++++++++||+|+++|.++++.++++|
T Consensus 377 ~~G~~-p~~~~~~~~~~~~~~~~~tP~~s~~n~i~~~~g~~~~ 418 (444)
T TIGR00785 377 AQGIP-LELLALALALSASLMGFLTPYATPPNAIAYGSGYVKI 418 (444)
T ss_pred HcCCC-HHHHHHHHHHHHHHHHHhcCCCCCccceeecCCCccH
Confidence 3443 4567778889999999999999999999998877765
No 10
>cd01117 YbiR_permease Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.
Probab=100.00 E-value=7.2e-39 Score=339.05 Aligned_cols=339 Identities=22% Similarity=0.278 Sum_probs=260.9
Q ss_pred ccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCch
Q 045863 164 SLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPR 241 (537)
Q Consensus 164 ~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~ 241 (537)
..++|.+++++++++++.++|+. +.+|+++.+++ +++++++|+|+++.+++|+|++||+++++.+ ++++
T Consensus 8 ~~~~~~~~~a~~~~~ll~~~g~~---~~~~~~~~~~~------~~i~~~~g~~~l~~~l~~tGl~~~ia~~l~~~~~~~~ 78 (384)
T cd01117 8 GLRLDRWAIALLGAALMLLFGVI---SLEDAPAAIDL------DTIILLFGLMVVSAALELSGFFDALGSRILVKAGSPR 78 (384)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCC---CHHHHHHHcCH------hHHHHHHHHHHHHHHHHHccHHHHHHHHHHHhcCCHH
Confidence 45588999999999999999876 78899887765 9999999999999999999999999999754 4678
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCC
Q 045863 242 TLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQIS 316 (537)
Q Consensus 242 ~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~is 316 (537)
++.+.++++++++|++++|+++++++.|++..+ .+|. .+++.+++++|+||..||+|+|+|+++.+..+++
T Consensus 79 ~l~~~~~~~~~~ls~~~~n~~~~~~~~Pi~~~l~~~~~~~~~----~~~~~~~~aa~~g~~~tp~g~~~n~i~~~~~~i~ 154 (384)
T cd01117 79 RLLFLLVLLSGILSALLTNDTACLVFTPIVLELARVAGLPPI----PLLLALATAANIGSAATPIGNPQNLLIASESGIS 154 (384)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCch----hHHHHHHHHHHcccccccCCCchhhhhhcCCCCC
Confidence 889999999999999999999999999997655 2332 3467899999999999999999999988888999
Q ss_pred hHHHHHHhhHHHHHHHHHHHHHHHh-hccccCCCcCCccccccccCCchhHHHHHHHHHHHHHHHHHhhhcCCCh-HHHH
Q 045863 317 TLPTMKSLFIPSAVSLAVPLAFLSL-TSEVNGKGQESSNVLASEQMAPRGQLVFAVGIGALIFVPVFKALTGLPP-YMGI 394 (537)
Q Consensus 317 f~~~~~~~~pp~lv~l~v~~~ll~~-~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~~lill~i~~~~~gi~~-~~va 394 (537)
|.||++.+.|+.++.+++.+.++++ +|+.+.+.++..+.++.++.+++++....+.+..+.+.|... .+.++ +.++
T Consensus 155 ~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 232 (384)
T cd01117 155 FPFFLAAMAPLALLGLLLLLILLLVLFPGELKGLPLDKATKEEGVGARKLAVKLLVLILLLLVAFLAL--LGVIPLWTAA 232 (384)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhcccHHHHHHHHHHHHHHHHHHHHH--hCccHHHHHH
Confidence 9999999999999887766655544 444321111111112333444433322222222121222222 23444 4455
Q ss_pred HHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHHHH
Q 045863 395 LLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAIGV 474 (537)
Q Consensus 395 liga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~~~ 474 (537)
+.++.++++.+ .++||+++++||++++||+|+|.++++++++|..+|+++.+.. ......+.+++++
T Consensus 233 ~~~~~ll~~~~------------~~~~~~l~~i~w~~ll~f~g~f~l~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 299 (384)
T cd01117 233 LVAAVLLLLTR------------LKPRRVLKKVDWGLLLFFAGLFILVGGFAQGLPLEGLSRLLPL-LDSVLSLFLVSIG 299 (384)
T ss_pred HHHHHHHHHhc------------CCHHHHHHhCCchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 55554444432 3789999999999999999999999999999999999988765 2333456889999
Q ss_pred HHHhHchHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCc
Q 045863 475 VSAVIDNVPLVAATMGMYDLTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKV 534 (537)
Q Consensus 475 lS~~isNtp~va~llpv~~~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~ 534 (537)
+|+|+||+|.++++.|+.... +...|+++++++++||++||+||+||+++++.+++
T Consensus 300 lS~~isN~p~~~~~~pi~~~~----~~~~~~~l~~~~~~gg~~tpigs~an~i~~~~~~~ 355 (384)
T cd01117 300 LSQLISNVPAVLLLLPFLPSA----DEKDWLLLAAGSTIAGNLTLLGSAANLIVAEAAER 355 (384)
T ss_pred HHHHhccHHHHHHHHHHHHhc----ccHHHHHHHHHhhcccccchhhHHHHHHHHHHHHH
Confidence 999999999999999987422 33567899999999999999999999999999833
No 11
>PF02040 ArsB: Arsenical pump membrane protein; InterPro: IPR000802 Arsenic is a toxic metalloid whose trivalent and pentavalent ions inhibit a variety of biochemical processes. Operons that encode arsenic resistance have been found in multicopy plasmids from both Gram-positive and Gram-negative bacteria []. The resistance mechanism is encoded from a single operon, which houses an anion pump. The pump has two polypeptide components: a catalytic subunit (the ArsA protein), which functions as an oxyanion-stimulated ATPase; and an arsenite export component (the ArsB protein), which is associated with the inner membrane []. The ArsA and ArsB proteins are thought to form a membrane complex that functions as an anion-translocating ATPase. The ArsB protein is distinguished by its overall hydrophobic character, in keeping with its role as a membrane-associated channel. Sequence analysis reveals the presence of 13 putative transmembrane (TM) regions.; GO: 0015105 arsenite transmembrane transporter activity, 0016021 integral to membrane
Probab=100.00 E-value=1.5e-38 Score=337.93 Aligned_cols=371 Identities=16% Similarity=0.186 Sum_probs=292.2
Q ss_pred HHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhCh
Q 045863 148 MALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQG 227 (537)
Q Consensus 148 ~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl 227 (537)
+++||++++++++++| .++|+++.++.|+.+++++|++ +.+|+.+..+ ..++..++++|++++++.+++.|+
T Consensus 2 a~~if~~tl~~vi~rP-~~l~~~~~A~~GA~l~l~~G~v---~~~d~~~v~~----~~~~~~l~~i~~~vis~~ld~~G~ 73 (423)
T PF02040_consen 2 AIAIFLLTLLLVIWRP-RGLPEAVWAVLGAALALALGVV---PLSDALAVWG----IVWDVTLFFIAMIVISELLDEAGF 73 (423)
T ss_pred hHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHHHhCCc---CHHHHHHHHH----HhccHHHHHHHHHHHHHHHHHhCh
Confidence 5789999999999998 5799999999999999999987 7888766432 245888889999999999999999
Q ss_pred HHHHHHHHh---cCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHh-CCChhHHHHHHHHHHHHHhhccccc
Q 045863 228 FKLVTDNIT---TRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWT 299 (537)
Q Consensus 228 ~~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~T 299 (537)
||++|.++. |++.++++..+.++++++|.|++||+++.+++|++ |+. .+|++. ..|++.+++.||.+|...
T Consensus 74 F~~~A~~~a~~a~g~~~rLf~~v~ll~~~vTaflsND~talilTPivla~~~~~~~~~~~~-lp~l~a~~~iAntASl~L 152 (423)
T PF02040_consen 74 FDWLALHAARWARGSGRRLFLLVYLLGAVVTAFLSNDATALILTPIVLALARRLGLNPKPP-LPFLFACAFIANTASLLL 152 (423)
T ss_pred HHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHhccchhhhhHHHHHHHHHHcCCCcccc-hHHHHHHHHHhhhhhccc
Confidence 999999985 46899999999999999999999999999999996 344 344321 246789999999999999
Q ss_pred cccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-h-ccccCCCcCCccccccccCCchhHHHHHHHHH-HH
Q 045863 300 PIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-T-SEVNGKGQESSNVLASEQMAPRGQLVFAVGIG-AL 376 (537)
Q Consensus 300 piG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~-~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~-~l 376 (537)
|++||+|+++.+..+++|.+|...|.+|.+++.+..+..+++ | |+++++.+..+..++++..+|+.....+..+. ++
T Consensus 153 pvSNltNLv~~~~~~~~f~~y~~~m~~P~l~ai~~t~~vl~~~fr~~l~~~~~~~~~~~p~~~i~d~~~~~~~~~vl~~l 232 (423)
T PF02040_consen 153 PVSNLTNLVAADAFGISFLEYAAVMALPSLAAIAVTYLVLWLYFRRDLPKRYDLSELPPPKSAIKDPRLFRLSLVVLALL 232 (423)
T ss_pred cccCcHHHHHHHccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhcccCccccccchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999988877666654 3 33555543222112334456666555554332 23
Q ss_pred HHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHH
Q 045863 377 IFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIAN 456 (537)
Q Consensus 377 ill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~ 456 (537)
....+..+.+|+|.+.++..++.+++..... ++.+++++.++++||+++.|..|+|+++.+++++|+.+++++
T Consensus 233 l~~~~~~~~~~ip~~~va~~~a~ill~~~~r-------~~~~~~~~~l~~~pW~il~F~~gLfvvV~~L~~~Gl~~~l~~ 305 (423)
T PF02040_consen 233 LAGFFVASFLGIPVSAVAGAGAVILLALARR-------SRKISPKRVLREVPWSILPFVLGLFVVVEGLENTGLTELLAR 305 (423)
T ss_pred HHHHHhccccCCcHHHHHHHHHHHHHHHHHh-------cccccHHHHHHhCCchHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 2345667788999998888887776665421 124577899999999999999999999999999999999999
Q ss_pred HHHhhhhhh-----HHHHHHHHHHHHhHchHHHHHHHHhhhhccCCCC--ChHHHHHHHHHHHHhhhhhHHhHHHHHHHH
Q 045863 457 YLDAHISNI-----DLIASAIGVVSAVIDNVPLVAATMGMYDLTSFPQ--DSKFWQLIAYCAGTGGSMLIIGSAAGVAFM 529 (537)
Q Consensus 457 ~l~~~i~~~-----~~i~~i~~~lS~~isNtp~va~llpv~~~~~~~~--~~~~~laLa~~a~iGg~lTpiGS~an~i~~ 529 (537)
.+....+.+ ..+.++++++||++||.|.+.+.-+..+..+.+. .....+++.+|+|+|+|+||+||.||+++.
T Consensus 306 ~l~~~~~~~~~~a~~~~g~~~A~lsnl~NNLPa~Li~~~ai~~~~~~~~~~~~~~~A~lIG~nlGp~lTp~GSLATLLWl 385 (423)
T PF02040_consen 306 LLGTAASQGLLAAILGMGFLSAILSNLMNNLPAVLIGALAIQAAHAPGLVREALIYALLIGVNLGPNLTPIGSLATLLWL 385 (423)
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhhcccCCchhHHHHHHHHHHhcccCcccchHHhHHHHHHH
Confidence 998754322 2356788999999999998865544433221111 235677899999999999999999999999
Q ss_pred hhcCc
Q 045863 530 GMEKV 534 (537)
Q Consensus 530 g~~~~ 534 (537)
+..|.
T Consensus 386 ~~L~~ 390 (423)
T PF02040_consen 386 HILRR 390 (423)
T ss_pred HHHHH
Confidence 88743
No 12
>cd01116 P_permease Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.
Probab=100.00 E-value=6.9e-38 Score=334.62 Aligned_cols=354 Identities=29% Similarity=0.389 Sum_probs=282.3
Q ss_pred HHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCC----HHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhCh
Q 045863 152 FGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPS----TEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQG 227 (537)
Q Consensus 152 Fv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~----~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl 227 (537)
|+.++++|++|+ +|.+++++.+++++.++|+. + .+++++++.+ +++++++++++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~---~p~~~~a~~~~~~~~~~g~~---~~~~~~~~~~~~~~~------~~i~~~~~~~~l~~~l~~tG~ 68 (413)
T cd01116 1 FIITYALIIFEK---VHRTVAALAGALWLVILGLA---TLSPDLETIVSWVDW------ETLALLLGMMIIVSILSETGV 68 (413)
T ss_pred ChHHHHHHHHcc---ccHHHHHHHHHHHHHHHHHh---cCCCCHHHHHHHccH------HHHHHHHHHHHHHHHHHHcCH
Confidence 578899999999 99999999999999999986 5 7888877655 999999999999999999999
Q ss_pred HHHHHHHHh---cCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH----h-CCChhHHHHHHHHHHHHHhhccccc
Q 045863 228 FKLVTDNIT---TRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRK----L-VPPSEYRKLLGAVVVIAANAGGAWT 299 (537)
Q Consensus 228 ~~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~----l-~~p~~~~~~~l~~va~aan~Gg~~T 299 (537)
.||+++++. +++++++.+.++++++++|.|++|+++++++.|++.. . .+|.. +++.+.+++|+||..|
T Consensus 69 ~~~la~~~~~~~~~~~~~~~~~~~~~~~~ls~~~s~~~~~~i~~pi~~~i~~~~g~~~~~----~~~~~~~~a~~g~~~t 144 (413)
T cd01116 69 FEYLAIWAVKISKGRPWRLLLLLGLLTAFLSAFLDNVTTVLLMVPVTIRLCEVLGLNPVP----VLISEVIAANIGGAAT 144 (413)
T ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcc----HHHHHHHHHHccchhh
Confidence 999999874 3577788899999999999999999999999998643 3 24432 3568899999999999
Q ss_pred cccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hccccCCCc-CC---ccccccccCCchhHHHHHHHH-
Q 045863 300 PIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSEVNGKGQ-ES---SNVLASEQMAPRGQLVFAVGI- 373 (537)
Q Consensus 300 piG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~~~~~~~-~~---~~l~~~~~i~~~~~~~~~l~l- 373 (537)
|+|+++|+++.+..+++|.||++.+.|+.++.++..++..++ +|+.+++.+ .. +|.+++++.++++.......+
T Consensus 145 p~g~~~n~~~~~~~~i~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (413)
T cd01116 145 LIGDPPNIMIGSAAGLTFNDFLLHMLPSVVLALVVTFILLYFLYRNILKAREEDVLALAELEPKYPIKDKVLLLKSLTIL 224 (413)
T ss_pred ccCCchhhhhhccCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcccchhHHHhhccccccccCcHHHHHHHHHHH
Confidence 999999999888889999999999999988877766555554 333322211 11 122233344444433433322
Q ss_pred HHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHH
Q 045863 374 GALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLRE 453 (537)
Q Consensus 374 ~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~ 453 (537)
...+..|.+.+..+++.+.+++++..++++.+. .++|||+.++++|+++++++|+++++++++++|+.++
T Consensus 225 ~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~~~~~~~i~w~~l~~~~g~~~l~~~l~~tG~~~~ 294 (413)
T cd01116 225 TLVIIGFVLHSPLGVSLGWIALLGALLLLLLAD----------KLDFEDVLSRVEWDTLLFFAGLFVLVGGLEELGIIEW 294 (413)
T ss_pred HHHHHHHHhccccCCCHHHHHHHHHHHHHHHcC----------CCCHHHHHHhCCCcHHHHHHHHHHHHHHHHHcCHHHH
Confidence 222245666666678889999999888877762 1388999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhh-H----HHHHHHHHHHHhHchHHHHHHHHhhhh-c---cCCCCChHHHHHHHHHHHHhhhhhHHhHHH
Q 045863 454 IANYLDAHISNI-D----LIASAIGVVSAVIDNVPLVAATMGMYD-L---TSFPQDSKFWQLIAYCAGTGGSMLIIGSAA 524 (537)
Q Consensus 454 la~~l~~~i~~~-~----~i~~i~~~lS~~isNtp~va~llpv~~-~---~~~~~~~~~~laLa~~a~iGg~lTpiGS~a 524 (537)
+++.+.+..++. . .+.++++++|+|+||+++++++.|+.. . .+.+ +...++++++++++|+++||+|+++
T Consensus 295 la~~l~~~~~~~~~~~~~~~~~~~~~~s~f~sn~~~~~~~~pi~~~~~~~~~~~-~~~~~~~~~~~a~~g~~~tp~gs~~ 373 (413)
T cd01116 295 IAELLVGVILGRIAVAVILILWISALLSAFIDNIPVTATMIPIVKDLASQLGIP-LLPLWWALALGACLGGNGTLIGASA 373 (413)
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHhcccccccccchH
Confidence 999998877443 2 246788999999999999999999863 2 2332 4568889999999999999999999
Q ss_pred HHHHHhhc
Q 045863 525 GVAFMGME 532 (537)
Q Consensus 525 n~i~~g~~ 532 (537)
|+++++..
T Consensus 374 n~i~~~~~ 381 (413)
T cd01116 374 NVVAAGIA 381 (413)
T ss_pred HHHHHHHH
Confidence 99999875
No 13
>COG0471 CitT Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=336.25 Aligned_cols=383 Identities=17% Similarity=0.206 Sum_probs=305.9
Q ss_pred hhhccCchhhH-HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhhhhhccchhHHH
Q 045863 133 VAINHSWVAAN-QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRS-IGAPSTEIAVSELSRASAEVSEIVF 210 (537)
Q Consensus 133 ~~~~~~p~g~~-~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gv-i~~~~~~~a~~~~~~~ls~~~~~I~ 210 (537)
+++.|.|.+++ .+| ..++++.+++.|++|+ +|...++++..++..+.++ ....+.+++...+.+ +++|
T Consensus 18 ~~~~~~~~~~~~~~~-~~a~~~~~~~~~i~~~---~~~~~~~ll~~~~~~l~~~~~~~~~~~~~l~~~~~------~~I~ 87 (461)
T COG0471 18 VLLGPVPFGLSGFAW-LFAILVAAIILWILEA---IPLFALAILVIVLLVLSGFILAISASKLALSGFAN------STIW 87 (461)
T ss_pred HHHhcCccccCchHH-HHHHHHHHHHHHHhcc---chHHHHHHHHHHHHHHhhhhhccccHHHHHHHhhc------cHHH
Confidence 67788888888 566 9999999999999999 8999999999999888775 000145566655433 9999
Q ss_pred HHHHHHHHHHHHHHhChHHHHHHHHh---cCCchHHHHHHHHHHHHHH-hhccchhHHHHHHHHHHHh----C-CChh-H
Q 045863 211 FLLGAMTIVEIVDAHQGFKLVTDNIT---TRKPRTLLWVIGFVTFFLS-SILDNLTSTIVMVSLLRKL----V-PPSE-Y 280 (537)
Q Consensus 211 li~g~~ii~~~l~~tGl~~ria~~l~---~~~~~~l~~~l~l~~~~lS-~fl~N~ta~~im~PI~~~l----~-~p~~-~ 280 (537)
+++++|.++.+++++|+++|+++++. +++++++.+.++++++++| ++.+|+++..++.|+++.+ . ++++ .
T Consensus 88 l~~~~f~~s~~~~~~gl~~~la~~~l~~~~~~p~~l~~~l~~~~~~ls~~~~sntat~~i~~piv~~~~~~~~~~~~~~~ 167 (461)
T COG0471 88 LIFGLFLLSKGLEKTGLGKRLALHLLRFFGTTPRGLALGLVLLTLFLSPAFPSNTATGGIMLPLILSLSPLLGSPPRDKI 167 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHhCceecccchhHhhHHhhhcchhhcCCChHHHH
Confidence 99999999999999999999998875 4689999999999999999 8899999999999998655 2 2222 3
Q ss_pred HHHHHHHHHHHHhhccccccccchhhhhhHhccc---CChHHHHHHhhHHHHHHHHHHHHHHHh-hcc-c-cCCCcCC--
Q 045863 281 RKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQ---ISTLPTMKSLFIPSAVSLAVPLAFLSL-TSE-V-NGKGQES-- 352 (537)
Q Consensus 281 ~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~---isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~-~-~~~~~~~-- 352 (537)
.+.+.+.+.+++|+|+.+||+|+|+|.+..+..+ ++|.+|++.+.|+.++.....+.+.|+ +++ + |+.++.+
T Consensus 168 ~~~l~~~i~~~~~ig~~~~~ig~~~N~i~~~~~~~~~~~~~~w~~~~~p~~iv~l~~~~li~~~~~~~~~~~~~~~~~~~ 247 (461)
T COG0471 168 GKRLILGIALAANIGSALTPIGNPPNIIAAGLLNPISLSWGEWFLAMLPLGILLLLLLLLLLYKLFPPREIKETPNNPVA 247 (461)
T ss_pred HHHHHHHHHHHhHhhcccccccCCccHHHHHhhcccCCCHHHHHHHHhhHHHHHHHHHHHHHHhhcChHhhccCcchHHH
Confidence 3346688999999999999999999999998777 999999999999999988877666766 444 2 2222111
Q ss_pred --ccccccccCCchhHHHHHHHHHHHHHHHHHhhhcCC-ChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCCh
Q 045863 353 --SNVLASEQMAPRGQLVFAVGIGALIFVPVFKALTGL-PPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDT 429 (537)
Q Consensus 353 --~~l~~~~~i~~~~~~~~~l~l~~lill~i~~~~~gi-~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W 429 (537)
++.++.++..++++....+++++. ..|.+++..+. +.+.+++++..++++.+ + .+|+|+.+++||
T Consensus 248 ~~~~~~~~~~~~~~~~l~~~i~~l~~-~~w~~~~~~~~~~~~~~ali~~~~~~~~~-v----------l~~~~~~~~i~W 315 (461)
T COG0471 248 AKRELKELGPLLRDEKLLLGIFLLLL-LLWIFGKLLGKIDATLIALIPVALLLLAG-V----------LTWKEVYKKIDW 315 (461)
T ss_pred HHHHHHHhcCcchhhHHHHHHHHHHH-HHHHhccccchhHHHHHHHHHHHHHHHHH-H----------HhHHHHHHhCCc
Confidence 134455666677777776655555 56877776654 77889999998888887 3 378899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH------HHHHHHHHHHHhHchHHHHHHHHhhhh--ccCCCCCh
Q 045863 430 QGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID------LIASAIGVVSAVIDNVPLVAATMGMYD--LTSFPQDS 501 (537)
Q Consensus 430 ~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~------~i~~i~~~lS~~isNtp~va~llpv~~--~~~~~~~~ 501 (537)
+++++|+|++.++++++++|..+|+++.+.+..++.. .+++.+.+.++|+||++++.+|+|++. ..+.+.++
T Consensus 316 ~~lilf~g~i~l~~~l~~tG~~~~i~~~l~~~~~~~~~~~il~~~~~~~~~~~~f~SntA~~~~m~Pi~~~ia~~l~~~p 395 (461)
T COG0471 316 GTLILFGGLIALGSALSKTGAIAWIAGLLAGSLGGLGPFAILLLLLLLTLVLTLFASNTATAIAMVPIAIALASALGGAP 395 (461)
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999999886431 245677899999999999999999984 22333233
Q ss_pred HHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCcccC
Q 045863 502 KFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDFF 537 (537)
Q Consensus 502 ~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f~ 537 (537)
.....++..++.++++||+|+++|.+++|+++++|.
T Consensus 396 ~~~~~~v~~~as~~~~tpv~~~~n~iv~g~G~~k~~ 431 (461)
T COG0471 396 LLLLMLVAVSASGGFLTPVGSPPNPIALGSGYVKFK 431 (461)
T ss_pred hHHHHHHHHHHhhhhhcCCCCCCCceEECCCCccHH
Confidence 344445555567788999999999999999999873
No 14
>PRK09547 nhaB sodium/proton antiporter; Reviewed
Probab=100.00 E-value=4.4e-37 Score=329.06 Aligned_cols=395 Identities=16% Similarity=0.111 Sum_probs=277.5
Q ss_pred CCchhhhcccccchhhHHHHHHHHHHHHhhhhhccCc---hhhH-HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHH
Q 045863 103 TSSSDFEANYQPKTDLLKALAVFAAAITGAVAINHSW---VAAN-QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAV 178 (537)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~g~~-~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~ 178 (537)
+-+|.|..++-.+...|--..+++..++ +|.- .+.- ..|..++=|+.+.... .+. .++|++....+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~~~l~~~~i~~l~~~-~~~-~pl~~~~~~a~~a- 75 (513)
T PRK09547 4 SLGRAFWKNFLGQSPDWYKLAIIAFLII-----NPLIFFLVSPFVAGWLLVAEFIFTLAMA-LKC-YPLQPGGLLAIEA- 75 (513)
T ss_pred cHHHHHHHhccCCCchHHHHHHHHHHHH-----hHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hhc-cCCCchHHHHHHH-
Confidence 3445666666666553333333333222 3322 0111 2677777344433222 222 2366666655555
Q ss_pred HHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHh
Q 045863 179 SLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSS 256 (537)
Q Consensus 179 ~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~ 256 (537)
+++|++ +++++++++.. -.+++++++ +++++++.++|++++++.++.+ ++++++.+.++++++++|+
T Consensus 76 --v~~Gv~---s~~~a~~~f~~----n~~vIlLL~--fMVv~i~~~~gll~~v~~kil~~~~s~~~Lll~~~l~aA~LSA 144 (513)
T PRK09547 76 --VFIGMT---SPEHVYHEIAA----NLEVLLLLM--FMVAGIYFMKQLLLFIFTKLLLSIRSKMLLSLAFCLAAAFLSA 144 (513)
T ss_pred --HHHCCC---CHHHHHHHhcc----CHHHHHHHH--HHHHHHHHHccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 446775 88999887533 115555544 5599999999999999999864 4788999999999999999
Q ss_pred hccchhHHHHHHHHHHH-------------------h-----CC---------ChhHHHHHHHHHHHHHhhccccccccc
Q 045863 257 ILDNLTSTIVMVSLLRK-------------------L-----VP---------PSEYRKLLGAVVVIAANAGGAWTPIGD 303 (537)
Q Consensus 257 fl~N~ta~~im~PI~~~-------------------l-----~~---------p~~~~~~~l~~va~aan~Gg~~TpiG~ 303 (537)
|+||+|++++++|+... + .+ |+++.+.+++..++++|+||.+|++|+
T Consensus 145 FLdN~Tvvav~iPV~l~~~~~~~~~a~~~~~~~~~~~~~~~~i~~~~~~~~~~p~pfL~~Llmpla~asnlGGv~TLIG~ 224 (513)
T PRK09547 145 FLDALTVIAVVISVAVGFYGIYHRVASGKGFSEDHDLTDDSHIDELYREDLEQFRAFLRSLMMHAGVGTALGGVMTMVGE 224 (513)
T ss_pred HHhhHHHHHhHHHHHHHHhhhhHHHHhccccccccccccccccchhhhhhhcccchHHHHHHHHHHHHHHhhhheeccCC
Confidence 99999999999999752 1 12 444545677889999999999999999
Q ss_pred hhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHH-------Hh-hcc-ccCCCcC-Cc----cccccccCCchhHH-H
Q 045863 304 VTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFL-------SL-TSE-VNGKGQE-SS----NVLASEQMAPRGQL-V 368 (537)
Q Consensus 304 ~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll-------~~-~~~-~~~~~~~-~~----~l~~~~~i~~~~~~-~ 368 (537)
|||+++.+..+++|.||+..+.|+++..++..+.++ ++ ||+ ++++.+. .. +.+++...+++.++ .
T Consensus 225 PqNLiIas~~g~~F~~F~~~~apv~lpvli~gll~~~l~~~~~~f~y~~~l~~~~~~~l~~~~~~~~~~~~~~d~~~L~~ 304 (513)
T PRK09547 225 PQNLIIAKQAGWHFGEFFLRMAPVTVPVLICGLLTCLLVEKFRWFGYGAKLPEKVRQVLQDYDDQERAKRTRQDKAKLIV 304 (513)
T ss_pred cHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhCcEEeeccccchhHHHHhhhhhhccCcccccccHHHHHH
Confidence 999999987799999999999988886665444433 12 222 2221111 11 12223333445444 4
Q ss_pred HHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhc-----CChHHHHHHHHHHHHHH
Q 045863 369 FAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSR-----IDTQGALFFLGILLSVS 443 (537)
Q Consensus 369 ~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~-----v~W~tLl~f~glf~l~~ 443 (537)
.++.++.++++.. ++++.++++|+.++++.+.. ++.+.++.+++ +||+++ |.|+|++++
T Consensus 305 ~~l~~~~li~~f~------l~~a~VaLiga~vill~~~~--------~~~~~e~~l~~~~~~~v~w~tL--f~glFivV~ 368 (513)
T PRK09547 305 QALIGVWLIVALA------LHLAEVGLIGLSVIILATAF--------TGVTDEHAIGKAFEEALPFTAL--LTVFFAVVA 368 (513)
T ss_pred HHHHHHHHHHHHH------HhHHHHHHHHHHHHHHhhcc--------cCCCHHHHHhhCcCCCCChHHH--HHHHHHHHH
Confidence 4433322222222 67899999999888777510 12466888888 999999 999999999
Q ss_pred HHHHhcHHHHHHHHHHhhhhhh--HHHHHHHHHHHHhHchHHHHHHHHhhhhc---cCC-CC--ChHHHHHHHHHHHHhh
Q 045863 444 SLEAAGLLREIANYLDAHISNI--DLIASAIGVVSAVIDNVPLVAATMGMYDL---TSF-PQ--DSKFWQLIAYCAGTGG 515 (537)
Q Consensus 444 ~L~~tG~~~~la~~l~~~i~~~--~~i~~i~~~lS~~isNtp~va~llpv~~~---~~~-~~--~~~~~laLa~~a~iGg 515 (537)
+++++|+.+.+++.+.+..++. ..+++.++++|+++||+|+++.+.|++.. .+. +. ..+.|++++.|+|+||
T Consensus 369 ~i~~~gl~~~i~~~~~~~~~~~~~~~~~~~sgllSaiiDNVp~~~~~ip~v~~~~~~g~~~~~~~~~L~~ALa~Ga~Lgg 448 (513)
T PRK09547 369 VIIDQHLFAPIIQFVLQASEHAQLSLFYIANGLLSSISDNVFVGTVYINEAKAALESGAISRKQFELLAVAINTGTNLPS 448 (513)
T ss_pred HHHHhhhHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcccch
Confidence 9999999999999999887543 35789999999999999999999999842 222 11 2478999999999999
Q ss_pred hhhHHhHHHHHHHH-hhc
Q 045863 516 SMLIIGSAAGVAFM-GME 532 (537)
Q Consensus 516 ~lTpiGS~an~i~~-g~~ 532 (537)
|.||+|++||++.. +.+
T Consensus 449 n~T~iGasAnlv~~~~~~ 466 (513)
T PRK09547 449 VATPNGQAAFLFLLTSAL 466 (513)
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 99999999999998 664
No 15
>KOG2639 consensus Sodium sulfate symporter and related arsenite permeases [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-37 Score=319.38 Aligned_cols=365 Identities=24% Similarity=0.342 Sum_probs=275.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHH-HHhcC-CCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHH
Q 045863 144 QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWI-VRSIG-APSTEIAVSELSRASAEVSEIVFFLLGAMTIVEI 221 (537)
Q Consensus 144 ~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v-~gvi~-~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~ 221 (537)
.-..+.+++++.|++++||- .|+..+++++..+... +.++| .++++++++.++. +++.+++|+|+++..
T Consensus 177 gv~~aa~il~gfyaLiVfe~---v~rt~aa~~~s~ls~a~Lavi~~rptle~iv~wID~------etL~LLfGmMilv~i 247 (685)
T KOG2639|consen 177 GVLYAAVILAGFYALIVFEI---VDRTFAAMLASTLSLAILAVIGDRPTLETIVSWIDF------ETLGLLFGMMILVAI 247 (685)
T ss_pred chHHHHHHHHHHHHHHHhhh---cchHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhhH------HHHHHHHHHHHHHHH
Confidence 46677888999999999999 9999888887554432 33444 3588999988776 999999999999999
Q ss_pred HHHhChHHHHHH---HHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHh
Q 045863 222 VDAHQGFKLVTD---NITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAAN 293 (537)
Q Consensus 222 l~~tGl~~ria~---~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan 293 (537)
+++||+||++|. +++|++.+-++..++++++++|++.||+|+++++.|+.-++ .+|.+. ++.+++.+|
T Consensus 248 lseTg~FdYlav~ayriSrG~~w~li~~Lclvtav~Sa~ldN~TtvLLltpv~IRLcevm~L~p~pv----Li~~vi~aN 323 (685)
T KOG2639|consen 248 LSETGVFDYLAVLAYRISRGHVWPLICLLCLVTAVLSAFLDNVTTVLLLTPVVIRLCEVMNLDPHPV----LIAVVIYAN 323 (685)
T ss_pred HhhccHHHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhcCCeEEEEecHHHHHHHHHhcCCCCce----EEEEEEecc
Confidence 999999999885 56778889999999999999999999999999999998665 366554 578899999
Q ss_pred hccccccccchhhhhhHh-----cccCChHHHHHHhhHHHHHHHHHHHHHH---Hhhcc---ccCCCcC-----------
Q 045863 294 AGGAWTPIGDVTTTMLWI-----HGQISTLPTMKSLFIPSAVSLAVPLAFL---SLTSE---VNGKGQE----------- 351 (537)
Q Consensus 294 ~Gg~~TpiG~~~Nll~~~-----~~~isf~~~~~~~~pp~lv~l~v~~~ll---~~~~~---~~~~~~~----------- 351 (537)
+||+.||||+|+|.+++. ..+++|.+|...++|..+++++....++ |+.+. .|+.++.
T Consensus 324 IGga~TPIGdPpNvIIatns~i~~~gv~f~~Ftahm~pgvlla~l~~~~~lrlly~~~~~l~~k~~~e~~el~~ei~v~r 403 (685)
T KOG2639|consen 324 IGGAATPIGDPPNVIIATNSEIPKAGVDFAVFTAHMLPGVLLAMLQTFMYLRLLYWNIEELMVKEPDEEVELKHEIHVWR 403 (685)
T ss_pred cccccCcCCCCCcEEEEecceecccCcchhhhhHHHHHHHHHHHHHHhhhHhhheechHHHhccCchHHHHHHHHHHHhh
Confidence 999999999999988765 2488999999888888777777665444 33221 1211100
Q ss_pred ----------Cc-c----------------cc-----------------------ccccCCchhHHHHHHH-HHHHHHHH
Q 045863 352 ----------SS-N----------------VL-----------------------ASEQMAPRGQLVFAVG-IGALIFVP 380 (537)
Q Consensus 352 ----------~~-~----------------l~-----------------------~~~~i~~~~~~~~~l~-l~~lill~ 380 (537)
++ + +. ++.+++++.+..-+.. +...++.+
T Consensus 404 ~~~~~~s~~sk~~envR~~~~~~i~~r~~~lr~r~~~~~~~~~a~~y~~tl~~l~~~~~irnk~ll~k~~~aL~fviv~F 483 (685)
T KOG2639|consen 404 LAAAQVSPASKEEENVRRTLSAKIRARARSLRERLPTSCNSNPAENYFNTLAELQAKNRIRNKTLLIKCLRALWFVIVCF 483 (685)
T ss_pred cCHhhcCcccchHHHHHHHHHHHHHHHHHHHhhhccccccCCccHHHHhhHHHHhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 00 0 00 0011222222222211 11111223
Q ss_pred HHhh---hc-CCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHH
Q 045863 381 VFKA---LT-GLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIAN 456 (537)
Q Consensus 381 i~~~---~~-gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~ 456 (537)
++.+ +. |++.+|+|++|+.+++++-+. .+.+..+.+++|.+++||+++|++..+++++|+.+|+++
T Consensus 484 ~l~svp~~~~gl~LgW~AIlgA~llLIl~d~----------~D~e~il~rVews~LLFfaalFI~~e~v~~lGli~~l~d 553 (685)
T KOG2639|consen 484 FLQSVPSLHMGLSLGWTAILGAILLLILADI----------KDIEAILHRVEWSTLLFFAALFILMEAVDKLGLIEWLGD 553 (685)
T ss_pred HHhccHHHhcCCCccHHHHHHHHHHHHHhch----------hhHHHHHHHhhHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 3333 33 789999999999888877531 145667779999999999999999999999999999999
Q ss_pred HHHhhhh---hh-------HHHHHHHHHHHHhHchHHHHHHHHhhhh------ccCCCCChHHHHHHHHHHHHhhhhhHH
Q 045863 457 YLDAHIS---NI-------DLIASAIGVVSAVIDNVPLVAATMGMYD------LTSFPQDSKFWQLIAYCAGTGGSMLII 520 (537)
Q Consensus 457 ~l~~~i~---~~-------~~i~~i~~~lS~~isNtp~va~llpv~~------~~~~~~~~~~~laLa~~a~iGg~lTpi 520 (537)
...+.+- .. ..+.|.++++|+|+||+|+++.|.++.. ..|.| ..+..|++++|+++|||.|.+
T Consensus 554 lte~vil~v~e~~~~~vAi~iilw~SAlasafidNipvt~~mVkl~~~lv~~~~~glp-l~pliWaL~~ga~~gGNgTLi 632 (685)
T KOG2639|consen 554 LTEPVILSVGESYRLMVAIVIILWVSALASAFIDNIPVTAIMVKLLTSLVANSAVGLP-LQPLIWALALGACLGGNGTLI 632 (685)
T ss_pred hhhHHhhhcchhhhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHhhccccCCC-cchHHHHHHhhhhhcCCceee
Confidence 9888762 11 1357889999999999999999988763 13444 356778899999999999999
Q ss_pred hHHHHHHHHhhc
Q 045863 521 GSAAGVAFMGME 532 (537)
Q Consensus 521 GS~an~i~~g~~ 532 (537)
|+.||.++.|.+
T Consensus 633 GasANvv~A~iA 644 (685)
T KOG2639|consen 633 GASANVVAAGIA 644 (685)
T ss_pred chhhHHHHHHHH
Confidence 999999998886
No 16
>cd01115 SLC13_permease Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.
Probab=100.00 E-value=5.1e-33 Score=293.74 Aligned_cols=330 Identities=20% Similarity=0.164 Sum_probs=263.8
Q ss_pred HHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChH
Q 045863 149 ALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGF 228 (537)
Q Consensus 149 l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~ 228 (537)
+++|+.++++|++|+ +|.+++++.++.++.++|+. +.+|+++++++ +++++++|+++++++++|+|+.
T Consensus 1 ~~i~~~~i~~w~~~~---~~~~~~al~~~~~l~~~g~~---~~~~~~~~~~~------~~i~li~g~~~l~~~~~~tG~~ 68 (382)
T cd01115 1 LAILVFAAVLFVTEA---LPLDVTALLVPVLLVLLGVV---PPKEAFSGFSD------PAVILFLAGFILGAALTRTGLA 68 (382)
T ss_pred CHHHHHHHHHHHHCc---ccHHHHHHHHHHHHHHhCCC---CHHHHHHHcCC------hHHHHHHHHHHHHHHHHHcCHH
Confidence 368999999999999 99999999999999999886 78888877665 9999999999999999999999
Q ss_pred HHHHHHHh---cCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh----C-CChhHHHHHHHHHHHHHhhcccccc
Q 045863 229 KLVTDNIT---TRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL----V-PPSEYRKLLGAVVVIAANAGGAWTP 300 (537)
Q Consensus 229 ~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l----~-~p~~~~~~~l~~va~aan~Gg~~Tp 300 (537)
||+++++. +++++++.+.+++.+.++|.+++|+++..++.|+...+ . +|. .+.+.+++++|.|+++||
T Consensus 69 ~~la~~i~~~~~~~~~~~~~~~~~~~~~ls~~~s~~~~~~i~~Pi~~~~~~~~g~~~~----~~~l~~~~~~~~g~~~~p 144 (382)
T cd01115 69 KRIATKLLKRAGKGERRLLLLLMLVTAFLSAFMSNTATVAIMLPVALGLAAKLDISPS----RLLMPLAFAASIGGMLTL 144 (382)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCChh----HHHHHHHHHHHhccccee
Confidence 99999986 35788889999999999999999999999999997544 2 332 345788999999999999
Q ss_pred ccchhhhhhHhc------ccCChHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCcCCccccccccCCchhHHHHHHHHH
Q 045863 301 IGDVTTTMLWIH------GQISTLPTMKSLFIPSAVSLAVPLAFLSLTSEVNGKGQESSNVLASEQMAPRGQLVFAVGIG 374 (537)
Q Consensus 301 iG~~~Nll~~~~------~~isf~~~~~~~~pp~lv~l~v~~~ll~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~ 374 (537)
+|+++|.++.+. .+++|.||++.+.|+.++.+++.+ ++ ++... ++.
T Consensus 145 ~g~~~n~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~---------------------~~~~~---~~~ 196 (382)
T cd01115 145 IGTPPNLVASGYLESLGGQGFSFFEFTPIGLPLLIIGLLYLW----FI---------------------FRLAV---LII 196 (382)
T ss_pred cCCchHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHHHHHH----HH---------------------HHHHH---HHH
Confidence 999999988762 357899999888877665443222 21 11111 122
Q ss_pred HHHHHHHHhhh--cCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHH
Q 045863 375 ALIFVPVFKAL--TGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLR 452 (537)
Q Consensus 375 ~lill~i~~~~--~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~ 452 (537)
.+ +.|++.+. .+.|.+.++++++.++++.+ ..++||+.+++||+++++++|.+.++++++++|+.+
T Consensus 197 ~i-~l~~~~~~~~~~~~~~~~a~~~~~~l~~~~-----------~~~~~~~~~~~~w~~l~~~~~~~~l~~~l~~~Gl~~ 264 (382)
T cd01115 197 TI-VLLAALAAITGLLPVSVAIAIGAIVLVFGG-----------VLLTKEDYKSIDWGIIFLFAGGIPLGKALESSGAAA 264 (382)
T ss_pred HH-HHHHHHHHHcCcccHHHHHHHHHHHHHHHc-----------cCCHHHHHHcCCchHHHHHHHHHHHHHHHHHcCHHH
Confidence 22 23444332 45788888888877776654 248899999999999999999999999999999999
Q ss_pred HHHHHHHhhhhh-hH-----HHHHHHHHHHHhHchHHHHHHHHhhhh----ccCCCCChHHHHHHHHHHHHhhhhhHHhH
Q 045863 453 EIANYLDAHISN-ID-----LIASAIGVVSAVIDNVPLVAATMGMYD----LTSFPQDSKFWQLIAYCAGTGGSMLIIGS 522 (537)
Q Consensus 453 ~la~~l~~~i~~-~~-----~i~~i~~~lS~~isNtp~va~llpv~~----~~~~~~~~~~~laLa~~a~iGg~lTpiGS 522 (537)
|+++.+.+..++ +. .+.+++.++|+++||++++.++.|++. ..+.+ +....+.++++++. +++||+|+
T Consensus 265 ~ia~~l~~~~~~~~~~~~~~~~~~~~~~ls~~~sn~~~~~i~~Pi~~~~~~~~g~~-p~~~~~~~~~~~~~-~~~tp~~~ 342 (382)
T cd01115 265 LIAEALISLLGGLPPFAILLLLCLLTLVLTNFISNTATAVLLAPIALSIALSLGLP-PEALLLAVAIGASC-AFMLPVGT 342 (382)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHH-HHcCccCC
Confidence 999999875432 22 246777899999999999999999873 23444 45677788888887 68999999
Q ss_pred HHHHHHHhhcCccc
Q 045863 523 AAGVAFMGMEKVDF 536 (537)
Q Consensus 523 ~an~i~~g~~~~~f 536 (537)
++|+++++..+++|
T Consensus 343 ~~n~i~~~~~~i~~ 356 (382)
T cd01115 343 PPNAIVLGPGGYKF 356 (382)
T ss_pred CCCeeeeCCCCccH
Confidence 99999999887765
No 17
>cd00625 ArsB_NhaD_permease Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.
Probab=100.00 E-value=6.2e-33 Score=294.27 Aligned_cols=345 Identities=26% Similarity=0.321 Sum_probs=261.1
Q ss_pred HHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHh
Q 045863 157 TGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIT 236 (537)
Q Consensus 157 ~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~ 236 (537)
++|++|+ +|.++++++++.++.++|+. +.+|+++++.| +++++++|+++++.+++|+|+.||+++++.
T Consensus 2 ilw~~~~---~~~~~~al~~~~~l~~~g~~---~~~~~~~~~~~------~~i~~~~g~~~l~~~l~~tG~~~~ia~~l~ 69 (396)
T cd00625 2 VLIRPEK---LPRAVVALLGAVLLVLLGVV---SPKEALSAIDW------ETILLLFGMMILSAALEETGLFDRLAAKLA 69 (396)
T ss_pred EEEEcCc---CCHHHHHHHHHHHHHHhcCC---CHHHHHHHcCH------HHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 3578999 99999999999999888876 88899887765 999999999999999999999999999984
Q ss_pred c---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh----C-CChhHHHHHHHHHHHHHhhccccccccchhhhh
Q 045863 237 T---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL----V-PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTM 308 (537)
Q Consensus 237 ~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l----~-~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll 308 (537)
+ ++++. .+.+++...+++.+++|++++.++.|+...+ . +| . +.+.+.++++++.||..||+|+++|.+
T Consensus 70 ~~~~~~~~~-~~~~~~~~~~ls~~~s~~~~~~il~Pi~~~~~~~~g~~~-~--~~l~~~~~~~a~~g~~~tp~gs~~n~i 145 (396)
T cd00625 70 RASKGSRRL-LLLLMLLTAALSAFFSNDATAVLLTPIVLALLRKLGLSP-P--VPLLLALAFAANIGGAATPIGNPPNLI 145 (396)
T ss_pred HHhCCCchH-HHHHHHHHHHHHHHHhchhhhhhhHHHHHHHHHHhCCCC-C--ccHHHHHHHHHhccccccccCCCCceE
Confidence 3 44555 6677888899999999999999999987544 2 33 1 124678999999999999999999998
Q ss_pred hHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hccccCCCcC-C-----ccccccccCCchhHHHHHHHHHHHHHHHH
Q 045863 309 LWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSEVNGKGQE-S-----SNVLASEQMAPRGQLVFAVGIGALIFVPV 381 (537)
Q Consensus 309 ~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~~~~~~~~-~-----~~l~~~~~i~~~~~~~~~l~l~~lill~i 381 (537)
+.+..++++.||++.+.|+.++..++.+.+.++ +|+.+.+.+. . ++.++.++.++++ ...+.++++ +.|+
T Consensus 146 ~~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~ 222 (396)
T cd00625 146 IASLSGLGFLDFLAFMAPPALGLLLLLLGLLYLLFRKKLLLPDEDKLTVLAEPLPARPLLKKFL--LLALLLLLL-FVLL 222 (396)
T ss_pred EEeCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhccChhcccccHHH--HHHHHHHHH-HHHH
Confidence 888778999999999999998877755555544 3332211111 1 1111222233333 222222222 2222
Q ss_pred HhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhh
Q 045863 382 FKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAH 461 (537)
Q Consensus 382 ~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~ 461 (537)
.... +++..++++++.++++... +.++|||+.+++||+++++++|.+.++.+++++|+.+|+++.+.+.
T Consensus 223 ~~~~--~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~i~w~~~~~~~~~~~l~~~l~~~G~~~~~a~~~~~~ 291 (396)
T cd00625 223 FFFL--IPLGLIALLGALLLLLLLV---------RGLDPEEVLKSVDWGTLLFFAGLFVLVGALESTGLLEWLAELLVAL 291 (396)
T ss_pred HHHH--HhHHHHHHHHHHHHHHHhc---------CCCCHHHHHHhCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 2221 4566677777665555541 1258999999999999999999999999999999999999999887
Q ss_pred hh-hhH----HHHHHHHHHHHhHchHHHHHHHHhhhhccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcC
Q 045863 462 IS-NID----LIASAIGVVSAVIDNVPLVAATMGMYDLTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEK 533 (537)
Q Consensus 462 i~-~~~----~i~~i~~~lS~~isNtp~va~llpv~~~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~ 533 (537)
.+ +.+ .+.++..++|+++||++++.++.|+..... + +...+.....++++|+++|++|+.+|++.++..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~s~~~~n~~~~~~~~Pi~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~s~a~~l~~~~~~ 366 (396)
T cd00625 292 VGLPPLAALLLIGLLSALLSNFISNVPTVALLLPIAASLA-P-PEPAWLALALGSTLGGNLTLIGSLANLIPLGAAE 366 (396)
T ss_pred hCCChHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhc-C-chHHHHHHHHHhcccccccccccHHHHHHHHHHH
Confidence 64 222 246677999999999999999999974221 2 3456677889999999999999999999999864
No 18
>TIGR00774 NhaB Na+/H+ antiporter NhaB. These proteins are members of the NhaB Na+:H+ Antiporter (NhaB) Family (TC 2.A.34). The only characterised member of this family is the Escherichia coli NhaB protein, which has 12 GES predicted transmembrane regions, and catalyses sodium/proton exchange. Unlike NhaA this activity is not pH dependent.
Probab=100.00 E-value=5.4e-31 Score=275.95 Aligned_cols=402 Identities=16% Similarity=0.128 Sum_probs=267.3
Q ss_pred CCchhhhcccccchh-hHHHHHHHHHHHH-hhh--hhccCchhhHHHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHH
Q 045863 103 TSSSDFEANYQPKTD-LLKALAVFAAAIT-GAV--AINHSWVAANQDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAV 178 (537)
Q Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~--~~~~~p~g~~~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~ 178 (537)
+-++.|..++-.+.. |.|. .+++..++ =++ .+.|-- .+|..++=|+.|...- .+- .|.---++++.=
T Consensus 4 ~~~~a~~~nflg~~p~wyk~-~i~~fl~~np~~~~~~~p~~----~gw~l~~efiftlama-lkc---ypl~pgglla~e 74 (515)
T TIGR00774 4 SLGNAFIKNFLGKSPDWYKL-AIIAFLIINPIVFFLISPFV----AGWLLVAEFIFTLAMA-LKC---YPLQPGGLLAIE 74 (515)
T ss_pred cHHHHHHHhccCCCchHHHH-HHHHHHHHhHHHHHHhChHH----HHHHHHHHHHHHHHHH-Hhc---CCCCCCcHHHHH
Confidence 334556666666655 4443 33333222 011 112222 2699998888886554 444 343333333332
Q ss_pred HHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHH-HHHhc-CCchHHHHHHHHHHHHHHh
Q 045863 179 SLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVT-DNITT-RKPRTLLWVIGFVTFFLSS 256 (537)
Q Consensus 179 ~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria-~~l~~-~~~~~l~~~l~l~~~~lS~ 256 (537)
.. ++|+. +++++++++.+ +.+++++++|+++.++.++|+.++++ +.+.+ ++.+++.+.+++.++++|+
T Consensus 75 a~-~iG~~---s~~~v~~e~~~------n~iVLfLg~FmVAga~fmk~Ll~~I~tklll~i~Sk~~L~l~f~laaafLSa 144 (515)
T TIGR00774 75 AI-AIGMT---SAAHVKHELVA------NIEVLLLLVFMVAGIYFMKQLLLFIFTKLLLGIRSKTLLSLAFCFAAAFLSA 144 (515)
T ss_pred HH-HHCCC---CHHHHHHHhcc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 22 34654 89999988765 99999999999999999999999999 55544 4888999999999999999
Q ss_pred hccchhHHHHHHHHHH-------Hh-----------CCCh-----------hHH---HHHHHHHHHHHhhccccccccch
Q 045863 257 ILDNLTSTIVMVSLLR-------KL-----------VPPS-----------EYR---KLLGAVVVIAANAGGAWTPIGDV 304 (537)
Q Consensus 257 fl~N~ta~~im~PI~~-------~l-----------~~p~-----------~~~---~~~l~~va~aan~Gg~~TpiG~~ 304 (537)
|+||+|++++|+|++. |. .+++ +++ |.++|..++++|+||++||+|+|
T Consensus 145 FLsnttvtAvmIpVavgfy~~yh~~~s~~~~~~~d~~~d~~~~~~~~~~l~~fr~fl~~LLM~~aiaAnLGGvlTpIGnP 224 (515)
T TIGR00774 145 FLDALTVVAVVISVAVGFYGIYHKVASGNPIGDHDHTDDDTITELTRDDLENFRAFLRSLMMHAGVGTALGGVMTMVGEP 224 (515)
T ss_pred HHHhHHHHHHHHHHHHHHhHHhhhhhccCchhhcCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCc
Confidence 9999999999999852 11 0111 222 24779999999999999999999
Q ss_pred hhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh---hc------cccCCCcCC-cc--ccccccCCchhHHHHHH-
Q 045863 305 TTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL---TS------EVNGKGQES-SN--VLASEQMAPRGQLVFAV- 371 (537)
Q Consensus 305 ~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~---~~------~~~~~~~~~-~~--l~~~~~i~~~~~~~~~l- 371 (537)
+|+++++..+.+|.+|+..+.|.++..++..+.++.+ ++ ++|++.+.. ++ .+++.+.+++++..+.+
T Consensus 225 QNLiias~~g~~F~~FF~~m~Pv~LP~lIilll~~~l~~~~~~~gyg~~lp~~v~~~l~~~~~~~~~~~~~~~~~~l~~q 304 (515)
T TIGR00774 225 QNLIIADQAGWLFGEFFLRMSPVTLPVFICGLLTCALVEKLKVFGYGEKLPDNVRQILVDFDREERKTRTNQDKIKLWVQ 304 (515)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccCCHHHHHHHHHHhHHHHHhcCHHHHHHHHHH
Confidence 9999999888888888888877666554433322222 11 122221110 01 12334444555544433
Q ss_pred HHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh-cCChHHHHHHHHHHHHHHHHHHhcH
Q 045863 372 GIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS-RIDTQGALFFLGILLSVSSLEAAGL 450 (537)
Q Consensus 372 ~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~-~v~W~tLl~f~glf~l~~~L~~tG~ 450 (537)
.+..+++. ++ +..+.+-+.++|+.+..+....-...+|+ +..++++ ..|...++ .-.|.++....+..+
T Consensus 305 ~~~~~~l~--~~--la~h~a~vg~igl~vii~~t~~~g~~~eh----~~g~af~ealpftall--~vff~~vavi~~q~l 374 (515)
T TIGR00774 305 ALIAVWLI--VA--LALHLAAVGLIGLSVIILATSFTGVTDEH----SIGKAFEESLPFTALL--AVFFSVVAVIIDQEL 374 (515)
T ss_pred HHHHHHHH--HH--HHHHHHHHhHHHHHHHHHHHHhcCCcchh----hhhHHHhhhccHHHHH--HHHHHHHHHHHhhhh
Confidence 23222221 11 11335567788887665554221001111 2345555 57776654 456777888999999
Q ss_pred HHHHHHHHHhhhhhh--HHHHHHHHHHHHhHchHHHHHHHHhhhhc---cCC-CC--ChHHHHHHHHHHHHhhhhhHHhH
Q 045863 451 LREIANYLDAHISNI--DLIASAIGVVSAVIDNVPLVAATMGMYDL---TSF-PQ--DSKFWQLIAYCAGTGGSMLIIGS 522 (537)
Q Consensus 451 ~~~la~~l~~~i~~~--~~i~~i~~~lS~~isNtp~va~llpv~~~---~~~-~~--~~~~~laLa~~a~iGg~lTpiGS 522 (537)
.+-+-+++...-++. ..+++.++++|+++||+|.+++|.|++.. .+. +. ..+.|++++.|+|+|||+||+|+
T Consensus 375 f~p~i~~vl~~~~~~q~~~ilw~SgilSa~IDNVP~vatmIPvIk~l~~~G~~~~~~~~~LWWALALGA~LGGNaTpiGA 454 (515)
T TIGR00774 375 FSPIIDFVLAAEEKTQLALFYVFNGLLSSISDNVFVGTVYINEAKAALTEGLITREQFELLAVAINTGTNLPSVATPNGQ 454 (515)
T ss_pred hHHHHHHHHcCCCccchHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCccccccHHHHHHHHhccccccccHHHH
Confidence 999988887765433 35789999999999999999999999852 222 11 24789999999999999999999
Q ss_pred HHHHHHHhhcC
Q 045863 523 AAGVAFMGMEK 533 (537)
Q Consensus 523 ~an~i~~g~~~ 533 (537)
.||+++.++++
T Consensus 455 sANLVv~~iA~ 465 (515)
T TIGR00774 455 AAFLFLLTSAL 465 (515)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 19
>PF03600 CitMHS: Citrate transporter; InterPro: IPR004680 Characterised proteins in this entry belong mostly to the divalent anion symporter family, which is found in bacteria, archaea and eukaryotes. Substrates shown to be transported by these proteins include citrate and phosphate []. This entry also contains the melanocyte-specific transporter protein P, mutation of which leads to albinism []. Another protein in this entry, SAC1, has been shown to regulate the sulphur deprivation response in Chlamydomonas by inducing cysteine biosynthesis, though its precise role in this induction is not known [].; GO: 0015137 citrate transmembrane transporter activity, 0015746 citrate transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=6.5e-29 Score=259.99 Aligned_cols=312 Identities=24% Similarity=0.299 Sum_probs=223.7
Q ss_pred HHHHHHHhhcccCcchHHHHHHHHHHHHHH-----HhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChH
Q 045863 154 IGYTGIIFEESLAFNKSGVGLLMAVSLWIV-----RSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGF 228 (537)
Q Consensus 154 ~~i~~ii~e~~l~ip~~~val~~~~~l~v~-----gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~ 228 (537)
+.+..+..++ +|....+++++.++.+. +.. +++|+++.+++ +++.+++|+++ +++++|+|++
T Consensus 8 i~~~~~~~~~---~~~~~~~~~~a~~~~l~g~~~~~~~---~~~~~~~~~~~------~~l~ll~g~~~-~~~l~~tG~~ 74 (351)
T PF03600_consen 8 IVLIVLIRKK---IPVVAAALLGALLVALFGFPGFGVI---SPEEAFSFIDW------NTLILLFGMMI-GAALEETGVF 74 (351)
T ss_pred HHHHHHHHHh---hhHHHHHHHHHHHHHHHHhcccccc---CHHHHHHHcch------hHHHHHHHHHH-HHHHHHcCCh
Confidence 3333445555 88888888888877776 332 78888877765 89999999999 9999999999
Q ss_pred HHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhcccccc
Q 045863 229 KLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGGAWTP 300 (537)
Q Consensus 229 ~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg~~Tp 300 (537)
|++++++.+ ++++++.+.++++++++|++++|++++.++.|++.++ .+|+ ++++.+++++|+||+.||
T Consensus 75 ~~ia~~i~~~~~~~~~~l~~~~~~~~~~lS~~~~N~~~v~~~~Pi~~~~~~~~~i~~~----~~l~~l~~~a~~gg~~t~ 150 (351)
T PF03600_consen 75 DWIARKIVRKSGGKPWRLLLLLMLVTALLSAFLDNTTVVLIMIPIVLSLARKLGIPPS----PLLMPLAFAANIGGMLTP 150 (351)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhhhcchHHHhhHHHHHHHHHHcCCChH----HHHHHHHHHhccccccCc
Confidence 999999865 3555889999999999999999999999999987655 2332 346899999999999999
Q ss_pred ccchhhhhhHhcccCCh--HHHHHHhhHHHHHHHHHHHHHHHhhccccCCCcCCccccccccCCchhHHHHHHHHHHHHH
Q 045863 301 IGDVTTTMLWIHGQIST--LPTMKSLFIPSAVSLAVPLAFLSLTSEVNGKGQESSNVLASEQMAPRGQLVFAVGIGALIF 378 (537)
Q Consensus 301 iG~~~Nll~~~~~~isf--~~~~~~~~pp~lv~l~v~~~ll~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~~lil 378 (537)
+|+|+|+++.+..+++| .||+....|..+++++..+...+++++. ++++.......+...++
T Consensus 151 iG~p~nl~i~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~ 214 (351)
T PF03600_consen 151 IGNPTNLIIANASGLPFFGFDFFALGLPAVIVGLLVLIFILYFLFRK----------------RKPKLFASPFILVLVVI 214 (351)
T ss_pred CCCcchhhhhhhcccccchhhhHhhhHHHHHHHHHHHHHHHHHHccc----------------cCcchhHHHHHHHHHHH
Confidence 99999998888778888 9999888888887777655444443211 11111122211111111
Q ss_pred HHHHhhhcCCChH-HHHHHHHHHHHHHhhhccccchhhccCCHHHHhh------cCChHHHHHHHHHHHHHHHHHHhcHH
Q 045863 379 VPVFKALTGLPPY-MGILLGLGVLWILTDAIHYGESERQKLKVPQALS------RIDTQGALFFLGILLSVSSLEAAGLL 451 (537)
Q Consensus 379 l~i~~~~~gi~~~-~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~------~v~W~tLl~f~glf~l~~~L~~tG~~ 451 (537)
... ...++.+. ...+.|..++++.++ .+.+|..+ ++||+++++|+|++.++++++++|..
T Consensus 215 ~~~--~~~~~~~~~~a~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~l~~tG~~ 281 (351)
T PF03600_consen 215 LVL--LVSGLVPIWIALLIGALLALLTNC-----------KDLKEAYRVLNSGASIDWNTLLFFAGLFIFVGALSNTGAF 281 (351)
T ss_pred HHH--HHhccCcHHHHHHHHHHHHHHHhc-----------ccchhhhHHHHhhccchHHHHHHHHHHHHHHHHHHHhHHH
Confidence 111 13455444 444446666555552 13344444 89999999999999999999999999
Q ss_pred HHHHHHHHhhhhhh--HHHHHHHHHHHHhHchHHHHHHH-----Hhhhhc--cCCCCChHHHHHHHHHHHHh
Q 045863 452 REIANYLDAHISNI--DLIASAIGVVSAVIDNVPLVAAT-----MGMYDL--TSFPQDSKFWQLIAYCAGTG 514 (537)
Q Consensus 452 ~~la~~l~~~i~~~--~~i~~i~~~lS~~isNtp~va~l-----lpv~~~--~~~~~~~~~~laLa~~a~iG 514 (537)
+++++.+.+..+.. ..+.+.+.++|+++||+|.+..+ +|+... .+.+. .|..++++.++|
T Consensus 282 ~~la~~l~~~~~~~~~~~i~~~~~~ls~~~~n~p~~~~~~~~~~~pi~~~~~~~~Gv---~~~~l~~~~~ia 350 (351)
T PF03600_consen 282 EALADWLLSISGPLGPLAILWVSALLSAVISNVPATLLMSNDAMLPIAISMAQQFGV---SPLPLAWALAIA 350 (351)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHHHhhhHHHHHHHHHHHHCCC---CHHHHHHHHHhc
Confidence 99999999876522 23566789999999999999887 677631 22332 234455555554
No 20
>TIGR00784 citMHS citrate transporter, CitMHS family. This family includes two characterized citrate/proton symporters from Bacillus subtilis. CitM transports citrate complexed to Mg2+, while the CitH apparently transports citrate without Mg2+. The family also includes uncharacterized transporters, including a third paralog in Bacillus subtilis.
Probab=99.94 E-value=7.6e-24 Score=227.94 Aligned_cols=358 Identities=13% Similarity=0.119 Sum_probs=245.1
Q ss_pred HHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHH
Q 045863 151 LFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKL 230 (537)
Q Consensus 151 IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~r 230 (537)
..+..+.++...+ ++.-+.-++..+...+.. |- + +|..+.+.++++...++..+++....++..++++|.+|+
T Consensus 9 ~~~~~~~l~~~~k---~~~~~al~~~~~~~~~~~--g~-~-~~~~~~i~~G~~~~~~~~~~i~~~~~l~~il~~sG~~~~ 81 (431)
T TIGR00784 9 MMTVFMILIMTKR---LSPLVALTITPIVFALIG--GF-G-KGIGDMMIEGIQTVAPTAAMLLFAILYFGIMIDAGLFDP 81 (431)
T ss_pred HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHc--CC-c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3333344445555 555544444444443333 22 4 677777888887677999999999999999999999999
Q ss_pred HHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHh-CCChhHHHHHHHHHHHHHhhcccccccc
Q 045863 231 VTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWTPIG 302 (537)
Q Consensus 231 ia~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG 302 (537)
+++++.| +++..+.+.+...+.+++.+.+|+++..++.|+. +++ .+|.. +...+..++|.++ .+|+|
T Consensus 82 i~~~iv~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~li~~p~~~~l~~~lgi~~~~----l~~~i~~~~~~~~-~~P~g 156 (431)
T TIGR00784 82 LIEKILSIVKGDPLKIAVGTAVLTMLIALDGDGTTTYMITVSAMLPLYKRLGMNPMV----LAGIAMLGLGIMN-MIPWG 156 (431)
T ss_pred HHHHHHHHhCCCCceeHHHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHcCCCHHH----HHHHHHHHhhhhc-ceeCC
Confidence 9998865 4567889999999999999999999998887765 444 34333 3456777778888 99999
Q ss_pred chhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hccccCCC-----cC----Cc-cccccccCCchhHHHHHH
Q 045863 303 DVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSEVNGKG-----QE----SS-NVLASEQMAPRGQLVFAV 371 (537)
Q Consensus 303 ~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~~~~~~-----~~----~~-~l~~~~~i~~~~~~~~~l 371 (537)
+|+|..+. ..|+++.||+.++.|+.+..+++.+.+.++ +|+.+++. +. .+ +.+++.+.+++++.+.++
T Consensus 157 ~p~~~~a~-~lg~~~~~~~~~~~p~~i~~li~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 235 (431)
T TIGR00784 157 GPTTRAIS-VLGLDPSEFFVPLIPTMLGGILCVIAVAYLLGKKERKRLGVIQLEPRASQSYPAAALESELKRPRLIWFNL 235 (431)
T ss_pred chHHHHHH-HcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHhHHHHHHhcccccchhhhhhhhccchhhhhcCchHHHHHH
Confidence 99995544 468999999999999998877655554444 33322110 00 00 101112233344434444
Q ss_pred HHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHh----hcCChHHHHHHHHHHHHHHHHHH
Q 045863 372 GIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQAL----SRIDTQGALFFLGILLSVSSLEA 447 (537)
Q Consensus 372 ~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l----~~v~W~tLl~f~glf~l~~~L~~ 447 (537)
.....++...+.+ .+++..+++++..+.++.++. + .+++ -|+.. +.++|.++++++|+| ++++++
T Consensus 236 l~~l~viv~~~~~--~~~~~~~~li~~~iall~~~~-~-~~~~-----~~~i~~~~~~~v~~~~Li~~aglf--~~~l~~ 304 (431)
T TIGR00784 236 LLTISLMVFLVLG--TKHLSVLFLIAFVLALTVNYP-N-VKMQ-----KERIAAHSGNALTVVSMVFAAGVF--TGILSG 304 (431)
T ss_pred HHHHHHHHHHHhc--ccCHHHHHHHHHHHHHHhcCC-C-HHHH-----HHHHHhccccHhHHHHHHHHHHHH--HHHHhh
Confidence 3322222222222 356888889998888887631 1 1111 12333 578999999999999 999999
Q ss_pred hcHHHHHHHHHHhhhhhh------HHHHHHHHHHHHhHchHHHHHHHHhhhhc--cCCCCChHHHHHHHHHHHHhhh---
Q 045863 448 AGLLREIANYLDAHISNI------DLIASAIGVVSAVIDNVPLVAATMGMYDL--TSFPQDSKFWQLIAYCAGTGGS--- 516 (537)
Q Consensus 448 tG~~~~la~~l~~~i~~~------~~i~~i~~~lS~~isNtp~va~llpv~~~--~~~~~~~~~~laLa~~a~iGg~--- 516 (537)
+|+.+++++.+.+..++. ..+.++++++|+++||+|++.+++|++.. .+.+.+ + ..++.+..+|.+
T Consensus 305 ~G~i~~la~~l~~~~~~~~~~~~~~i~~~~s~~~s~~~sn~a~~~~l~Piv~~ia~~~G~~-~--~~l~~a~~i~~~~~~ 381 (431)
T TIGR00784 305 TKMVDAMAGSLVSIIPSSMGGFFPVIVALTSIPFTFVMSNDAYYFGVLPIFAEAASAYGID-P--VEIARASIMGQPVHL 381 (431)
T ss_pred cCHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC-H--HHHHHHHHhcccchh
Confidence 999999999999876432 13567889999999999999999999842 233322 2 234455566666
Q ss_pred hhHHhHHHHHHHHhhcCccc
Q 045863 517 MLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 517 lTpiGS~an~i~~g~~~~~f 536 (537)
++|+ +++|.+++|.++++.
T Consensus 382 ~SPv-s~~~~l~~~~~~~~~ 400 (431)
T TIGR00784 382 LSPL-VPSTVLLVGMLGVSL 400 (431)
T ss_pred cCCc-hHHHHHHHHccCCCH
Confidence 8999 899999999988764
No 21
>KOG1281 consensus Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.2e-24 Score=233.46 Aligned_cols=366 Identities=15% Similarity=0.088 Sum_probs=260.7
Q ss_pred HHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHH
Q 045863 153 GIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVT 232 (537)
Q Consensus 153 v~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria 232 (537)
...-..|++|. +|.++++++-..+.+..|+. +.+|.-.. .+.++.+++.|..+++.+.++.++.+|++
T Consensus 49 ~vm~~yw~~Ea---lpl~vtal~p~~l~p~~gi~---~s~eva~~------yf~d~~~l~~~~l~~A~AvE~~~Lh~ria 116 (586)
T KOG1281|consen 49 LVMAVYWVTEA---LPLAVTALLPIVLFPFFGIV---RSNEVANE------YFKDTNLLFLGGLIMALAVEKCNLHKRIA 116 (586)
T ss_pred HHHHHHHHHhh---cCchHHHHHHHHHHHHhcCc---cHHHHHHH------HHhhhhHHHhhhHHHHHHHHHhhhhHHHH
Confidence 33445789999 99999999999999999876 44444332 23489999999999999999999999999
Q ss_pred HHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh----CC----------------------------C
Q 045863 233 DNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL----VP----------------------------P 277 (537)
Q Consensus 233 ~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l----~~----------------------------p 277 (537)
.+..+ -+|.++.+.++..++++|+|++|++++++|+|++..+ .. |
T Consensus 117 L~~~~~vg~~P~~l~lg~m~~taflsmwisntA~tamm~pi~~avL~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vp 196 (586)
T KOG1281|consen 117 LKVLRKVGVEPARLMLGFMGVTAFLSMWISNTATTAMMIPIATAVLQELPSFNDEEQHRMLESVSHLWAVEAIPTSFLVP 196 (586)
T ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcccchhhhhhhHHHhhcchhhhcCCcccCCc
Confidence 98754 5899999999999999999999999999999997322 00 0
Q ss_pred -------------------h----------h----HHHHHHHHHHHHHhhccccccccchhhhhhHhc---------ccC
Q 045863 278 -------------------S----------E----YRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIH---------GQI 315 (537)
Q Consensus 278 -------------------~----------~----~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~---------~~i 315 (537)
. + ..+.+.+++++++++||..|.+|+.+|++..+. ...
T Consensus 197 ~~~v~~~~~~~~~g~~~~~~~~~i~~~~~s~~~~~~~~g~~L~ia~Sa~igg~~titGT~pnlVll~~~~~~fp~s~~~~ 276 (586)
T KOG1281|consen 197 LLTVFFPILKDETGKPMSPTSSSILSTMWSSTIMLLLKGFTLGIAYSAYIGGTLTITGTAPNLVLLGNMNVRFPLSMWVS 276 (586)
T ss_pred chhhcccccCCccCCCCCcchhhhhhhccchHHHHHHHHHHHHHHHHHhhcchhhhcCCCccHHHHHHHHHhcccccccc
Confidence 0 0 113366899999999999999999999886552 257
Q ss_pred ChHHHHHHhhHHHHHHHHHHHHHHHh-h------ccc---cCCCcCCc----------cccccccCCchhHHHHHHHHHH
Q 045863 316 STLPTMKSLFIPSAVSLAVPLAFLSL-T------SEV---NGKGQESS----------NVLASEQMAPRGQLVFAVGIGA 375 (537)
Q Consensus 316 sf~~~~~~~~pp~lv~l~v~~~ll~~-~------~~~---~~~~~~~~----------~l~~~~~i~~~~~~~~~l~l~~ 375 (537)
+|..|+.+.+||.+..+...+.++++ + ++. +.+.+.++ +.++.+++.-.++.+..++++.
T Consensus 277 Nf~swl~Fs~ppmL~~L~~~w~~l~~lflG~~~~~~~~~~~s~~~s~q~~~a~~~i~~~y~~lG~~~~~e~~v~ilfil~ 356 (586)
T KOG1281|consen 277 NFASWLFFSFPPMLRYLLASWPFLQALFLGIALAANIGGMSSPISSPQNIVAKKVIKPEYDGLGPMFFAEKPVFILFILL 356 (586)
T ss_pred chHHHHHHhhHHHHHHHHHHHHHHHHHHhhhHhhhhhcCCCCCcCChHHHHHHHHhhHhhcccccchHHHHHHHHHHHHH
Confidence 88999999999999988888776643 2 111 11111111 1233456665666666555554
Q ss_pred HHHHHHHhhh---------c----CCChHHHHHHHHHHHHHHhhhccc-cch----------hhccCCHHHHhhcCChHH
Q 045863 376 LIFVPVFKAL---------T----GLPPYMGILLGLGVLWILTDAIHY-GES----------ERQKLKVPQALSRIDTQG 431 (537)
Q Consensus 376 lill~i~~~~---------~----gi~~~~valiga~lLll~~~vl~~-~~~----------~~~~i~~~~~l~~v~W~t 431 (537)
+ .+|+..+. + ......++++...+++++..-+.. ++. .....+|++..++.+|+.
T Consensus 357 v-~lw~tr~p~~~pgw~~~f~~~~~~~d~t~~~~i~ilLf~lps~~~~f~~~~~~~~~p~~~~~~l~~w~~~q~~fPWsI 435 (586)
T KOG1281|consen 357 V-WLWFTRDPGFVPGWGDLFKPGFFQSDSTSVVIITILLFCLPSQIPGFGKSGFIAIIPIVVFFGLGLWKTVQFTFPWSI 435 (586)
T ss_pred H-HHHHhcCCCCccchHhhcCCccceehhhHHHHHHHHhheecccCccccccCcccccccccccCccchhhhcccCCchH
Confidence 4 34554431 1 122234555556666666532210 000 112479998888999999
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhh-H----HHHHHHHHHHHhHchHHHHHHHHhhhhc--cCCCCChHHH
Q 045863 432 ALFFLGILLSVSSLEAAGLLREIANYLDAHISNI-D----LIASAIGVVSAVIDNVPLVAATMGMYDL--TSFPQDSKFW 504 (537)
Q Consensus 432 Ll~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~-~----~i~~i~~~lS~~isNtp~va~llpv~~~--~~~~~~~~~~ 504 (537)
+++.+|+|+++.+.+++|+.+|+++.+.+.-+.+ + .+.+++.++++|.||++.+.+++|+... ...+.+ ++.
T Consensus 436 vlLlgGGfALakgv~sSGLs~~I~~~L~~l~~~p~~~i~li~~ll~~v~TeF~Sntata~IfiPIl~ela~~l~~h-ply 514 (586)
T KOG1281|consen 436 VLLLGGGFALAKGVSSSGLSSLIGNALKPLESLPVFAILLIFSLLILVVTEFVSNTATASIFIPILAELAEALGIH-PLY 514 (586)
T ss_pred hhhhccchhhhhhcccccHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHhcchhheeehHHhHHHHHHhcCCC-Cce
Confidence 9999999999999999999999999999833322 2 2356779999999999999999999852 222222 222
Q ss_pred HHHHHHHHHhh---hhhHHhHHHHHHHHhhcCc
Q 045863 505 QLIAYCAGTGG---SMLIIGSAAGVAFMGMEKV 534 (537)
Q Consensus 505 laLa~~a~iGg---~lTpiGS~an~i~~g~~~~ 534 (537)
+.+.+++++ .+.|.+++||.++++++..
T Consensus 515 --l~lp~tl~~SfAf~LPvstpPNaivfs~~~~ 545 (586)
T KOG1281|consen 515 --LMLPTTLACSFAFMLPVSTPPNAIVFSMGDI 545 (586)
T ss_pred --eehhHHHHHHHHHhcCCCCCCCeEEEeeccc
Confidence 333344443 3899999999999988743
No 22
>COG2851 CitM H+/citrate symporter [Energy production and conversion]
Probab=99.83 E-value=1.2e-18 Score=177.50 Aligned_cols=328 Identities=15% Similarity=0.157 Sum_probs=228.8
Q ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHH---hcCCchHHHHHHHHHHHHHHhhccchhHH----H
Q 045863 193 IAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNI---TTRKPRTLLWVIGFVTFFLSSILDNLTST----I 265 (537)
Q Consensus 193 ~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l---~~~~~~~l~~~l~l~~~~lS~fl~N~ta~----~ 265 (537)
+..+.+.++.....++..+++.+..++..+.++|+||.+-+++ .|+++.++..+..+++.+.|--.|..|+. -
T Consensus 45 ~lg~m~~~Gi~~va~t~imlmFAILfFgIM~DsGLFdPli~~il~~~kgdp~kV~igTavla~~v~LDGdGatTflIti~ 124 (433)
T COG2851 45 GLGEMMLDGIKSVAPTAIMLMFAILFFGIMIDSGLFDPLIRKILSIVKGDPVKVVIGTAVLAAVVSLDGDGATTFLITIP 124 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcCCceeeeHHHHHHHHHhhccCCCceEEEeeHH
Confidence 3333445555667799999999999999999999999999987 46899999999999999998888777766 4
Q ss_pred HHHHHHHHh-CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHhh-c
Q 045863 266 VMVSLLRKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSLT-S 343 (537)
Q Consensus 266 im~PI~~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~ 343 (537)
-|+|+++++ .+| + .+..++..++---+++|+|.|+. .+.+..|.+-.|.+..+.|..++.++..+.+.++. +
T Consensus 125 A~LPlYkrLgmn~--~---~l~~l~~ls~gvmN~~PWGGPt~-Raas~Lg~d~~el~~pliP~~i~Gl~~vl~lA~~lG~ 198 (433)
T COG2851 125 ALLPLYKRLGMNP--Y---LLALLATLSAGVMNMLPWGGPTA-RAASVLGVDPAELFVPLIPIQIIGLVLVLALAWLLGK 198 (433)
T ss_pred hHhHHHHHcCCcH--H---HHHHHHHHhhhheecCCCCCcHH-HHHHHhCCCHHHHHhhhhHHHHHHHHHHHHHHHHhhH
Confidence 567999998 343 3 12233334443345999999987 77778899999999888888887776554444442 2
Q ss_pred cccCCC---c------CCcc--ccccccCCchhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccc
Q 045863 344 EVNGKG---Q------ESSN--VLASEQMAPRGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGE 412 (537)
Q Consensus 344 ~~~~~~---~------~~~~--l~~~~~i~~~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~ 412 (537)
+++++. + +..+ .++.++.+|+++.|++..+..-++.+.+.+ -+|+...+++|.++.+.+||. ..|
T Consensus 199 kErkRlg~~~~~~~~~~~~~~~~~~~~~~~rpkl~W~N~lLtl~lm~~Lv~g--i~p~~~lFmig~~iAL~vNYP--~vk 274 (433)
T COG2851 199 KERKRLGVIDLSEELEQLVELSEEDQEELKRPKLFWFNLLLTLALMGLLVSG--IFPPGVLFMIGFAIALPVNYP--NVK 274 (433)
T ss_pred HHHHHhhhccCchhhhhccccCCchhhhhhccHHHHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHHHhCCC--CHH
Confidence 222111 0 0111 123344778888898875544434444443 368999999999999999963 223
Q ss_pred hhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH--HHHHHHHHHH----HhHchHHHHH
Q 045863 413 SERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID--LIASAIGVVS----AVIDNVPLVA 486 (537)
Q Consensus 413 ~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~--~i~~i~~~lS----~~isNtp~va 486 (537)
+|++++. +++-+.+.--.++|-+|.| .+.+++||+.|.+++.+.+.++... ..-++++++| -|+||.++..
T Consensus 275 ~Q~~ri~-aha~nal~vvs~i~AAGif--~Gil~gtgMvdama~si~~vIP~~lgpyl~~ivgl~svP~tf~~snDAyYf 351 (433)
T COG2851 275 EQMERIG-AHAGNALMVVSLIFAAGIF--LGILSGTGMVDAMAKSIVSVIPDALGPYLPLIVGLLSVPFTFFMSNDAYYF 351 (433)
T ss_pred HHHHHHH-HhCcchhHHHHHHHHHHHH--hhhhCCCchHHHHHHHHHHhCcHhhcchHHHHHHHHcCCeEEEecCcchhh
Confidence 3333221 2233346667788888888 7999999999999999999987653 3445555555 6889999999
Q ss_pred HHHhhhhc--cCCCCChHHHHHHHHHHHHhhh---hhHHhHHHHHHHHhhcCcccC
Q 045863 487 ATMGMYDL--TSFPQDSKFWQLIAYCAGTGGS---MLIIGSAAGVAFMGMEKVDFF 537 (537)
Q Consensus 487 ~llpv~~~--~~~~~~~~~~laLa~~a~iGg~---lTpiGS~an~i~~g~~~~~f~ 537 (537)
.++|++.. .+.+.++ ...+.++-+|.. ++|.- ++..+..|.+|.++|
T Consensus 352 GvlPIv~e~as~yGv~p---v~~A~AsiiGq~vh~lSPlv-Pat~LlvgLa~v~~g 403 (433)
T COG2851 352 GVLPIVAEAASAYGVEP---VEIARASIIGQPVHFLSPLV-PATYLLVGLAKVDMG 403 (433)
T ss_pred hhHHHHHHHHHHcCCCH---HHHHHHHHhCCcceeeccch-HHHHHHHHhhcCChh
Confidence 99999852 3444332 234444444444 55665 888999999999875
No 23
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=99.71 E-value=1.1e-14 Score=156.89 Aligned_cols=295 Identities=14% Similarity=0.210 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHH---HHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHh-CCCh
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTD---NITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKL-VPPS 278 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~---~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l-~~p~ 278 (537)
++++++++.+..+..++|||..|+++. ++.|+++++..+.+.+++.++|.+.+|..++..+.|+. +++ .+|.
T Consensus 49 ~vi~~Il~vg~~~~vl~~TGaid~~~~~~~k~~~~~~~~~~lli~i~~~lfs~~~~~~~~~i~~~PI~i~ia~~lG~d~~ 128 (433)
T PRK09412 49 DVILIIMAVIAAIAAMQAAGGLDYLVKLAEKILRKNPKYITFLAPIVTYLFTFLAGTGHIAFSTLPVIAEVAKEQGIRPS 128 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 999999999999999999999998886 55677788888888888999998877777667777775 444 3554
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHhcc--cCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCC---
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHG--QISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQES--- 352 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~--~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~--- 352 (537)
+. +..+.+++|+|+..+|+|.++|.++.... +++|.||++...|..++.+++...+.++| +|.|++++..
T Consensus 129 ~~----l~~~~~~a~iG~~aspin~~tv~ia~~ia~~gi~f~~~~~~~lp~~iv~~~~~~~~~~~ya~kv~~~P~~~~~~ 204 (433)
T PRK09412 129 RP----LSIAVVASQIAITASPISAAVVAMSSVLEPLGVSYLTLLMVVIPSTLLAVMVAAFVTNKMGKELKDDPEYQKRL 204 (433)
T ss_pred ch----HHHHHHHHHHhcccCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHh
Confidence 42 34677899999999999988776655533 89999999999999888777655555444 4343332110
Q ss_pred --cc---cc-ccccCCchhHHHHHHHHHHHHHHHHHhhhc----CC------ChH-HHH--HHHHHHHH-HHhhhccccc
Q 045863 353 --SN---VL-ASEQMAPRGQLVFAVGIGALIFVPVFKALT----GL------PPY-MGI--LLGLGVLW-ILTDAIHYGE 412 (537)
Q Consensus 353 --~~---l~-~~~~i~~~~~~~~~l~l~~lill~i~~~~~----gi------~~~-~va--liga~lLl-l~~~vl~~~~ 412 (537)
++ .+ +..+.++|++....++++.++...+.+... +. +.+ ..+ ++.++++. +.+ .
T Consensus 205 ~~~~~~~~~~~~~~~t~r~kl~l~if~~~i~~~~i~G~~~~~~~~w~~~~~~~~~e~~~~~fl~~gii~glv~-g----- 278 (433)
T PRK09412 205 AEGLVKLRGEKEIEIKPGAKLSVILFLLGVVAVVLYAIFPSLRPGFIEGPPLGMTEAIQIFMLSAAALIVLLC-K----- 278 (433)
T ss_pred hchhhccccccccccCHhHHHHHHHHHHHHHHheeeeeccccccccccCCCCCHHHHHHHHHHHHHHHHHHHh-C-----
Confidence 01 10 112345566666665554432221222111 12 111 122 33333322 222 1
Q ss_pred hhhccCCHHHHhhc-CCh---HHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHH-HHHHHhH-chHHHHH
Q 045863 413 SERQKLKVPQALSR-IDT---QGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAI-GVVSAVI-DNVPLVA 486 (537)
Q Consensus 413 ~~~~~i~~~~~l~~-v~W---~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~-~~lS~~i-sNtp~va 486 (537)
++.+|..++ .-+ ..+++..|+.-.+..+.+.+ .|.+.+.+.+.++..+++.... .+++.++ +|.+++-
T Consensus 279 -----l~~~~ia~~~~F~~G~~~~v~iiGlA~~i~vi~~~~-~dtI~~~l~~~l~~~p~~~a~~mfiv~~~i~gqAa~~p 352 (433)
T PRK09412 279 -----IDTDEILSSSVFKSGMSACICILGVAWLGDTFVNAH-IDEIKETAGSLIQSYPWLLAVALFFASALLYSQAATAK 352 (433)
T ss_pred -----CCHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhhHHHHHH
Confidence 233333331 444 55557888888888877776 6999999988876443322222 2223333 4455555
Q ss_pred HHHhhhhccCCCCChHHHHHHHHHHHHhhhhhHH
Q 045863 487 ATMGMYDLTSFPQDSKFWQLIAYCAGTGGSMLII 520 (537)
Q Consensus 487 ~llpv~~~~~~~~~~~~~laLa~~a~iGg~lTpi 520 (537)
+|.|+.+..|.+ ++.. .+++-.+-|..++|-
T Consensus 353 Im~PLad~lGi~-rq~~--Vla~q~g~gn~i~Pt 383 (433)
T PRK09412 353 ALMPLALALGVP-PLTA--IASFAAVSGLFVLPT 383 (433)
T ss_pred HHHHHHHHcCCC-HHHH--HHHHHHhccCEECCC
Confidence 556665545554 3333 344444545446775
No 24
>PLN00136 silicon transporter; Provisional
Probab=99.67 E-value=2.4e-15 Score=163.90 Aligned_cols=165 Identities=12% Similarity=0.166 Sum_probs=136.8
Q ss_pred cCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHh---cCCch
Q 045863 165 LAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIT---TRKPR 241 (537)
Q Consensus 165 l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~---~~~~~ 241 (537)
.++|.+++++++++++.+.+.. +++++++.++| ++++++.|+|+++.+++|+|+.++++..+. +.++.
T Consensus 299 ~g~p~~~iAl~~a~~lll~~~~---~~~~~l~~v~W------~~Llff~GlFilv~~l~~tGl~~~i~~~l~~~~~~~~~ 369 (482)
T PLN00136 299 VGLNMSWTAITTAIALVVVDFR---DAEPCLDTVSY------SLLVFFSGMFITVSGFNKTGLPGAIWNFMAPYSKVNSV 369 (482)
T ss_pred cCCCHHHHHHHHHHHHHHhcCC---CHHHHHHhCCC------cHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhcCCChH
Confidence 4589999999999999877753 88899888877 999999999999999999999999998774 35677
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHhhccccccccchhhhhhHhc------
Q 045863 242 TLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLV---PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIH------ 312 (537)
Q Consensus 242 ~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~---~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~------ 312 (537)
...+.+.++++++|.++||++++++|.|++.... .+.+.... .+..++++++||..||+|+++|++..+.
T Consensus 370 ~~~~~~~~~s~~lS~~isNvp~~~~m~p~v~~~~~~~~~~~~~~~-~~~la~ga~lGGn~TliGs~ANli~~~~~~~~~~ 448 (482)
T PLN00136 370 GGISVLSVIILLLSNLASNVPTVLLMGDEVAAAAALISPAAVTRS-WLLLAWVSTVAGNLSLLGSAANLIVCEQARRAPR 448 (482)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcccCCcccchH-HHHHHHHHhhccceeeccchhHHHHHHHHHHhhc
Confidence 7888999999999999999999999999986541 12221112 2458999999999999999999886542
Q ss_pred --ccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 313 --GQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 313 --~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
.+++|.||++++.|++++.+++...++
T Consensus 449 ~G~~isf~~f~k~G~P~~l~~~~i~~~~~ 477 (482)
T PLN00136 449 NAYDLTFWQHIVFGVPSTLIVTAIGIPLI 477 (482)
T ss_pred cCCcccHHHHHHHhHHHHHHHHHHHHHHH
Confidence 259999999999999998887665444
No 25
>cd01116 P_permease Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.
Probab=99.67 E-value=4.7e-15 Score=158.76 Aligned_cols=180 Identities=19% Similarity=0.252 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHh
Q 045863 146 LAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAH 225 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~t 225 (537)
+..+.+++.++..|.++...+++.+.+++++++++.+.+.. .+.+|+++.++| +++++++|+++++.+++++
T Consensus 218 ~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~i~w------~~l~~~~g~~~l~~~l~~t 289 (413)
T cd01116 218 LKSLTILTLVIIGFVLHSPLGVSLGWIALLGALLLLLLADK--LDFEDVLSRVEW------DTLLFFAGLFVLVGGLEEL 289 (413)
T ss_pred HHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHcCC--CCHHHHHHhCCC------cHHHHHHHHHHHHHHHHHc
Confidence 45677788888888888744567899999999888777642 267788777766 9999999999999999999
Q ss_pred ChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhccc
Q 045863 226 QGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGGA 297 (537)
Q Consensus 226 Gl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg~ 297 (537)
|+.|+++.++.+ +++......+++++.++|.|++|++++.++.|++..+ .+|.. +.+.+++++|+||.
T Consensus 290 G~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~s~f~sn~~~~~~~~pi~~~~~~~~~~~~~~----~~~~~~~~a~~g~~ 365 (413)
T cd01116 290 GIIEWIAELLVGVILGRIAVAVILILWISALLSAFIDNIPVTATMIPIVKDLASQLGIPLLP----LWWALALGACLGGN 365 (413)
T ss_pred CHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhcCCCchH----HHHHHHHHHhcccc
Confidence 999999998843 4566667788899999999999999999999987543 23332 35789999999999
Q ss_pred cccccchhhhhhHhcc-----cCChHHHHHHhhHHHHHHHHHHHH
Q 045863 298 WTPIGDVTTTMLWIHG-----QISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 298 ~TpiG~~~Nll~~~~~-----~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
+||+|+++|++..+.. +++|.||++++.|+.++..+....
T Consensus 366 ~tp~gs~~n~i~~~~~~~~g~~~~~~~~~~~g~~~~i~~~~~~~~ 410 (413)
T cd01116 366 GTLIGASANVVAAGIAEQHGYKISFWEFLKVGFPIMLVSLILATV 410 (413)
T ss_pred cccccchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998876532 489999999999998876654443
No 26
>PRK15445 arsenical pump membrane protein; Provisional
Probab=99.65 E-value=8.3e-15 Score=157.82 Aligned_cols=188 Identities=20% Similarity=0.169 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHH
Q 045863 146 LAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRS-IGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDA 224 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gv-i~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~ 224 (537)
...+++++.+++++++...+++|.+.++++++.++.+.+- .+..+.+|+.++++| ++++++.|++.++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~i~~~~va~~~a~ll~~~~~~~~~~~~~~~~~~v~W------~~l~~~~g~~~l~~al~~ 297 (427)
T PRK15445 224 KLGWIVLALLLVGYFVLEPLGIPVSAIAGVGALILLLVARRGHAINTKKVLKGAPW------QIVIFSLGMYLVVYGLRN 297 (427)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHhCCh------HHHHHHHHHHHHHHHHHH
Confidence 3444555555555555545678999999999888876431 011277788777777 999999999999999999
Q ss_pred hChHHHHHHHHh---cCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccc
Q 045863 225 HQGFKLVTDNIT---TRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPI 301 (537)
Q Consensus 225 tGl~~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~Tpi 301 (537)
+|+.+++++.+. +.++......+++++.++|.|+||+++++++.|.+..........+.+.+++++++|+||..||+
T Consensus 298 tG~~~~la~~l~~~~~~~~~~~~~~~~~~s~~lS~~~sN~p~~~~~~~~i~~~~~~~~~~~~l~~al~~ga~~gg~~T~i 377 (427)
T PRK15445 298 AGLTDYLAGVLNYLADQGLFAATLGTGFLAAFLSSVMNNMPTVLIGALAIDGSNATGVIKEAMIYANVIGSDLGPKITPI 377 (427)
T ss_pred cCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhccCCcchHHHHHHHHHHhcccCcccchh
Confidence 999999999874 34677788889999999999999999999876666554221111123456889999999999999
Q ss_pred cchhhhhhHh-----cccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 302 GDVTTTMLWI-----HGQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 302 G~~~Nll~~~-----~~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
|+++|++..+ ..+++|.||++.+.|..++.+++.+..+
T Consensus 378 Gs~an~i~~~~~~~~g~~i~f~~f~k~G~~~~~~~~~~~~~~l 420 (427)
T PRK15445 378 GSLATLLWLHVLAQKGVKISWGYYFKVGIIITLPVLLVTLLAL 420 (427)
T ss_pred hhHHHHHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999986443 2357899999999998888777555444
No 27
>TIGR00786 dctM TRAP transporter, DctM subunit. force-dependent uptake of dicarboxylates into R. capsulatus.
Probab=99.64 E-value=9.1e-13 Score=141.08 Aligned_cols=300 Identities=11% Similarity=0.102 Sum_probs=175.6
Q ss_pred HHHHHHHHhChHHHHHHHHh---cCCchHHHHHHHHHHHHHHhhc-cchhHHHHHH----HHHHHhCCChhHHHHHHHHH
Q 045863 217 TIVEIVDAHQGFKLVTDNIT---TRKPRTLLWVIGFVTFFLSSIL-DNLTSTIVMV----SLLRKLVPPSEYRKLLGAVV 288 (537)
Q Consensus 217 ii~~~l~~tGl~~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl-~N~ta~~im~----PI~~~l~~p~~~~~~~l~~v 288 (537)
.++..++|+|+.||+.+.+. ++.+.++.+...+.+++++++. ++.++++++. |+++|.+-+++. ..
T Consensus 48 ~~g~~l~~~G~~~~l~~~~~~~~g~~~~~~~~~~~~~~~l~g~l~Gs~~ataa~~~~~~iP~m~~~g~~~~~------a~ 121 (405)
T TIGR00786 48 LAGNLMNRGGLARRLLNFAKALVGHLRGGLGHVNVLACALFAAVSGSSVATAAALGSLLIPAMTKAGYPKAF------AA 121 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHcCCCHHH------HH
Confidence 78899999999999998764 5667778899999999999998 5555555554 556777322222 23
Q ss_pred HHHHhhccccccccchhhh--h-hHhcccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCCccccccccCCch
Q 045863 289 VIAANAGGAWTPIGDVTTT--M-LWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQESSNVLASEQMAPR 364 (537)
Q Consensus 289 a~aan~Gg~~TpiG~~~Nl--l-~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~~~l~~~~~i~~~ 364 (537)
++.+..++..+. .|+|. + .....++++.||+.....|.++..+....+.+++ ++.+.+..+..+. ++..++.
T Consensus 122 av~a~~~~~g~l--~Pp~~~~i~~a~~~~i~~~~~~~a~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 197 (405)
T TIGR00786 122 GVIAASGIIGPL--IPPSIVMIIYGVAAGVSIAKLFIAGILPGLLLALSLMLTIWWVARRLGYPRPPKASL--RQRLRAF 197 (405)
T ss_pred HHHHHHhccccc--cCchHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccCH--HHHHHHH
Confidence 333333333333 34443 2 3334689999999866666665544333223332 2211111011111 1111111
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCC------hHHHHHHHHH
Q 045863 365 GQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRID------TQGALFFLGI 438 (537)
Q Consensus 365 ~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~------W~tLl~f~gl 438 (537)
++.+..+.+..+++..++.+. .++...+..++...++.+... + ++.+++|..+.++ |..++.+++.
T Consensus 198 ~~~~~~l~l~~~vi~~~~~g~--~~~~~a~~~~~~~alli~~~~-~-----~~~~~~~~~~~l~~~~~~~~~i~lii~aa 269 (405)
T TIGR00786 198 RKSIWALLLPVLIIGGIFSGI--FTPTEAAAVAAVYALALSTFV-Y-----RELTLKSLCDVLLESLRTTSMVMLIIAGA 269 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHHH-H-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222222222222221 455555555554444443111 0 1245665555554 7899999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHhhhhhhHH----HHHHHHHHHHhHchHHHHHHHHhhhh--ccCCCCC-hHHHHHHHHHH
Q 045863 439 LLSVSSLEAAGLLREIANYLDAHISNIDL----IASAIGVVSAVIDNVPLVAATMGMYD--LTSFPQD-SKFWQLIAYCA 511 (537)
Q Consensus 439 f~l~~~L~~tG~~~~la~~l~~~i~~~~~----i~~i~~~lS~~isNtp~va~llpv~~--~~~~~~~-~~~~laLa~~a 511 (537)
..+...++++|+.+.+++.+.+...+.+. +.++..++..+++|++....++|+.. ..+.+.+ ..+...+.+++
T Consensus 270 ~~~~~vL~~tG~~~~ia~~l~~~~~~~~~~~~li~~~~~ilg~~~~~~a~~~i~~PI~~p~a~~~Gv~p~~~~~~~~~~~ 349 (405)
T TIGR00786 270 TVFSWLLTHAQIPQRLADLLANAISSPIVFLIMINILLLIVGMFMDLTPAILILTPILLPVAVHLGIDPVHFGVMFVLNL 349 (405)
T ss_pred HHHHHHHHHcChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 99999999999999999999986544432 24556788899999999998999873 2233322 22334446666
Q ss_pred HHhhhhhH-HhHHHHHHHHhhcCccc
Q 045863 512 GTGGSMLI-IGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 512 ~iGg~lTp-iGS~an~i~~g~~~~~f 536 (537)
.. |.+|| +|...+ +..|.+|+|+
T Consensus 350 ~~-g~ltPPvg~~~~-~~~~~~~~~~ 373 (405)
T TIGR00786 350 EI-GLLTPPVGTNLF-VASGVAKMSI 373 (405)
T ss_pred HH-hcCCCCchHHHH-HHHHhcCCCH
Confidence 66 46786 984433 6678888875
No 28
>cd01115 SLC13_permease Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.
Probab=99.64 E-value=2.1e-14 Score=151.86 Aligned_cols=180 Identities=16% Similarity=0.232 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHHhhcc--cCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHh
Q 045863 148 MALLFGIGYTGIIFEES--LAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAH 225 (537)
Q Consensus 148 ~l~IFv~~i~~ii~e~~--l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~t 225 (537)
...+|+.++++|++... .+.|...+++++++++.+.+.. +.+|+.++++| ++++++.|++.++.+++++
T Consensus 190 ~~~~~~~~i~l~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~---~~~~~~~~~~w------~~l~~~~~~~~l~~~l~~~ 260 (382)
T cd01115 190 RLAVLIITIVLLAALAAITGLLPVSVAIAIGAIVLVFGGVL---LTKEDYKSIDW------GIIFLFAGGIPLGKALESS 260 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHccC---CHHHHHHcCCc------hHHHHHHHHHHHHHHHHHc
Confidence 33555666666664321 2378999999999888888865 78888776665 9999999999999999999
Q ss_pred ChHHHHHHHHhc---C-CchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhcc
Q 045863 226 QGFKLVTDNITT---R-KPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGG 296 (537)
Q Consensus 226 Gl~~ria~~l~~---~-~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg 296 (537)
|+.|++++.+.+ + +++.+...+.+.+.+++.+++|++++.++.|++..+ .+|.. +.+..++++|. +
T Consensus 261 Gl~~~ia~~l~~~~~~~~~~~~~~~~~~~~~~ls~~~sn~~~~~i~~Pi~~~~~~~~g~~p~~----~~~~~~~~~~~-~ 335 (382)
T cd01115 261 GAAALIAEALISLLGGLPPFAILLLLCLLTLVLTNFISNTATAVLLAPIALSIALSLGLPPEA----LLLAVAIGASC-A 335 (382)
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHcCCChHH----HHHHHHHHHHH-H
Confidence 999999998853 3 667788899999999999999999999999987543 34432 45788888887 6
Q ss_pred ccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 297 AWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 297 ~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
.+||+|+++|+++.+.+++++.||++++.|+.++.+++...+.|.
T Consensus 336 ~~tp~~~~~n~i~~~~~~i~~~~~~~~~~p~~i~~~~~~~~~~~~ 380 (382)
T cd01115 336 FMLPVGTPPNAIVLGPGGYKFSDFAKVGLPLSILSLVVSVTMIPL 380 (382)
T ss_pred HcCccCCCCCeeeeCCCCccHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 999999999998888889999999999999999888766554443
No 29
>TIGR00785 dass anion transporter. Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+.
Probab=99.63 E-value=1.3e-14 Score=156.87 Aligned_cols=183 Identities=17% Similarity=0.182 Sum_probs=151.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHH-hhhhhccchhHHHHHHHHHHHHHHH
Q 045863 144 QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSE-LSRASAEVSEIVFFLLGAMTIVEIV 222 (537)
Q Consensus 144 ~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~-~~~~ls~~~~~I~li~g~~ii~~~l 222 (537)
+.+..+++|+.++++|+++...++|.+.+++.+++++.+.+.+ +.+++.+. ++| ++++++.|++.++.++
T Consensus 247 ~e~~~l~v~~~~i~~~~~~~~~~~~~~~~al~~~~ll~~~g~~---~~~~~~~~~v~w------~~l~~~~g~~~l~~~l 317 (444)
T TIGR00785 247 REKALLGIFLLALLLWIFGGSLGINASVVALLAVVLMLFLGIV---TWKDIQKNKVAW------NTLILFGGLIGLAGGL 317 (444)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHhCcc---cHHHHhhccCCc------HHHHHHHHHHHHHHHH
Confidence 4678999999999999999666689999999999999888876 77777653 444 9999999999999999
Q ss_pred HHhChHHHHHHHHhc----CC-chHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHH
Q 045863 223 DAHQGFKLVTDNITT----RK-PRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAA 292 (537)
Q Consensus 223 ~~tGl~~ria~~l~~----~~-~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aa 292 (537)
+++|+.+++++++.+ .+ +..++..+.+...+++.+++|++++.++.|++..+ .+|.. +.+..++++
T Consensus 318 ~~sG~~~~i~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~~~~i~~Pi~~~ia~~~G~~p~~----~~~~~~~~~ 393 (444)
T TIGR00785 318 KKSGFIKWFSEKLVGILDGLSPTIAVLVLVVLFYIILYFFASNTAHTAALVPIFFSVASAQGIPLEL----LALALALSA 393 (444)
T ss_pred HHcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHcCCCHHH----HHHHHHHHH
Confidence 999999999998743 23 44555777889999999999999999999987543 34432 356888999
Q ss_pred hhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 293 NAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 293 n~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
|.+|..||+|+|+|.++.+.+++++.||++.+.|..++.+++...+.
T Consensus 394 ~~~~~~tP~~s~~n~i~~~~g~~~~~~~~k~~~p~~l~~~~~~~~~~ 440 (444)
T TIGR00785 394 SLMGFLTPYATPPNAIAYGSGYVKIKDMWRVGAIIGIVGLIVLLLVG 440 (444)
T ss_pred HHHHHhcCCCCCccceeecCCCccHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99989999999999888777789999999999999988776444333
No 30
>TIGR00770 Dcu anaerobic c4-dicarboxylate membrane transporter family protein. These proteins are members of th C4-Dicarboxylate Uptake (Dcu) Family (TC 2.A.13). Most proteins in this family have 12 GES predicted transmembrane regions; however one member has 10 experimentally determined transmembrane regions with both the N- and C-termini localized to the periplasm. The two Escherichia coli proteins, DcuA and DcuB, transport aspartate, malate, fumarate and succinate, and function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively.
Probab=99.56 E-value=3.6e-12 Score=137.01 Aligned_cols=166 Identities=11% Similarity=0.219 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHH---hcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHh-CCCh
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNI---TTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKL-VPPS 278 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l---~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l-~~p~ 278 (537)
++++++++++...+.+++||.+|+...++ .|+++++..+.+.+++.++|.+.+|...+..+.|+. +++ .+|.
T Consensus 45 ~vI~~il~vgg~~~vl~~TGaid~~v~~~~k~~~~~~~~~~llipii~~lfs~~~g~~~~~l~f~PI~i~la~~lG~d~i 124 (430)
T TIGR00770 45 DVILIIMAVIAAIAAMQAAGGLDYLVQIAEKLLRRNPKYITILAPSVTYFLTILAGTGHVVYSTLPVIAEVAKEQGIKPE 124 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCCcchhhhhHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999988744 567788888889999999999999988888888875 455 3554
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHhc--ccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCC---
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIH--GQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQES--- 352 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~--~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~--- 352 (537)
+. +....+++|+|++.+|+++++|.++... .+++|.+++....|+.++.+++..++.++| +|.|++++..
T Consensus 125 ~~----~ai~~~aa~iG~~as~in~~~~~~ig~~~~~Gi~f~~~l~~rip~~~v~l~v~~~~v~~y~~kvkkdP~~~~~~ 200 (430)
T TIGR00770 125 RP----LSLAVVSSQIAITASPVSAAVVFMSAILEPLGIEYLDLLMVTIPSTFLGCMLTAFFVNFFGKKLDKDPEYQERL 200 (430)
T ss_pred hH----HHHHHHHHHHHHHhhcccHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhhhhh
Confidence 33 3567889999999999999888665442 489999999999999888777655544444 3343322210
Q ss_pred --ccc-----cccccCCchhHHHHHHHHHHH
Q 045863 353 --SNV-----LASEQMAPRGQLVFAVGIGAL 376 (537)
Q Consensus 353 --~~l-----~~~~~i~~~~~~~~~l~l~~l 376 (537)
++. .+..+.++|++..+.++++.+
T Consensus 201 ~~~~~~~~~~~~~~~~t~r~k~~l~~f~~~~ 231 (430)
T TIGR00770 201 KAGKIVPTRGKKEKETSKSAKLSVWIFLGGV 231 (430)
T ss_pred hhhhhcccccccccCCCHhHHHHHHHHHHHH
Confidence 010 011245667777766655544
No 31
>COG1055 ArsB Na+/H+ antiporter NhaD and related arsenite permeases [Inorganic ion transport and metabolism]
Probab=99.55 E-value=2.6e-13 Score=144.89 Aligned_cols=187 Identities=19% Similarity=0.238 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHH----HHHHhhhhhccchhHHHHHHHHHHHHHH
Q 045863 146 LAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEI----AVSELSRASAEVSEIVFFLLGAMTIVEI 221 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~----a~~~~~~~ls~~~~~I~li~g~~ii~~~ 221 (537)
.....++..+.+++..++.+++|...+++.++.++++..-. ++++ +.++.+| ++++|++|+|++..+
T Consensus 225 ~~~~~vl~~vli~f~~~~~~~i~~~~val~~a~ill~~~~~---~~~~~~~~il~~v~W------~~l~Ff~Glfi~V~g 295 (424)
T COG1055 225 KLSLVVLALVLIAFLLLPFLGIPVSLVALVGAAILLLLARL---SPRESVNKILRGVEW------STLLFFIGLFIVVGG 295 (424)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHhcc---CcchhHHHhhhcCCh------HHHHHHHHHHHHHHH
Confidence 55667777777788888888999999999999999887643 4444 5555555 999999999999999
Q ss_pred HHHhChHHHHHHHHh---cCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhcccc
Q 045863 222 VDAHQGFKLVTDNIT---TRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAW 298 (537)
Q Consensus 222 l~~tGl~~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~ 298 (537)
++|+|+.+.++..+. +++...-...+.++++++|+++||.++++++.|+++..............+.+++|+.||..
T Consensus 296 l~~~Gv~~~la~~l~~~~~~~~~~~~~~~~~~s~~lSsv~~NvP~vl~~~~~i~~~~~~~~~~~~lw~A~a~Ga~lGgnl 375 (424)
T COG1055 296 LENAGVTEDLASVLKALSSGGLAAATLGIGWLSGLLSSVLDNVPTVLTFAPIIKGLAANGMGKEPLWLALALGADLGGNL 375 (424)
T ss_pred HHHcChHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhhccchHHHHHHHHHHhhcccccchHHHHHHHHHhCccccch
Confidence 999999999999874 34556667888999999999999999999999999876322111012235899999999999
Q ss_pred ccccchhhhhhHh-----cccCChHHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 299 TPIGDVTTTMLWI-----HGQISTLPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 299 TpiG~~~Nll~~~-----~~~isf~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
|++|+.+|++..+ ..++||.+|++...+..+..+++...++|+
T Consensus 376 T~IGs~Anlv~~~i~~~~g~~is~~~f~k~g~~i~~~~l~i~~~~l~~ 423 (424)
T COG1055 376 TPIGSAANLVWLGVLERKGVPISFGEFFKVGIIVTLPSLFITLLYLYL 423 (424)
T ss_pred hhhhhHHHHHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999987655 237999999999999888877766655543
No 32
>TIGR00935 2a45 arsenical pump membrane protein.
Probab=99.54 E-value=4.6e-13 Score=144.27 Aligned_cols=184 Identities=23% Similarity=0.212 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHH-hcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHH
Q 045863 146 LAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVR-SIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDA 224 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~g-vi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~ 224 (537)
+..+++|+.++++|.++...++|....++.++.++.+.- ..+..+.+|+.++++| ++++++.|+|.+++++++
T Consensus 225 ~~~~~v~~~~i~~~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~i~w------~~l~~~~g~f~l~~~l~~ 298 (429)
T TIGR00935 225 KKCWIVLVFLLVGFFVLEFLGIPVSAIAWIAALGAIALAILADAIDTEKVLRGAPW------QIVLFSAGMYLVVEGLKN 298 (429)
T ss_pred HHHHHHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHhcCCCCHHHHHHhCCc------HHHHHHHHHHHHHHHHHH
Confidence 567888899999998877666777777676655443321 1111377888877777 999999999999999999
Q ss_pred hChHHHHHHHHh---cCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhC-----CChhHHHHHHHHHHHHHhhcc
Q 045863 225 HQGFKLVTDNIT---TRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLV-----PPSEYRKLLGAVVVIAANAGG 296 (537)
Q Consensus 225 tGl~~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~-----~p~~~~~~~l~~va~aan~Gg 296 (537)
+|+.+++++.+. +.++......+.++++++|.+++|++ ++.|++..+. ..++. .+.+++++++|+||
T Consensus 299 tG~~~~la~~~~~~~~~~~~~~~~~~~~~~~~ls~~~sN~~---~~~pi~~~i~~~~~~g~~~~--~~~~~l~~~~~~gg 373 (429)
T TIGR00935 299 LGLTEYLGGILNVLEDRGLWAAILGTGFVSAFLSSIMNNMP---TMLVGALSIDQSSATGLPKE--PMVYANVIGADLGP 373 (429)
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHccHH---HHHHHHHHHhhccccccchh--HHHHHHHHHHhcCc
Confidence 999999999553 24566667788899999999999988 4678765441 11111 23568999999999
Q ss_pred ccccccchhhhhhHh----cc-cCChHHHHHHhhHHHHHHHHHHHHHHH
Q 045863 297 AWTPIGDVTTTMLWI----HG-QISTLPTMKSLFIPSAVSLAVPLAFLS 340 (537)
Q Consensus 297 ~~TpiG~~~Nll~~~----~~-~isf~~~~~~~~pp~lv~l~v~~~ll~ 340 (537)
.+||+|+++|++..+ .+ +++|.||++++.|.+++.+++...+++
T Consensus 374 ~~tp~gs~anli~~~~~~~~g~~~~~~df~k~g~~~~~~~~~i~~~~l~ 422 (429)
T TIGR00935 374 KITPIGSLATLLWLHVLEQKGYKISWGYYFRTGIPMTIPVLFVTLAYLL 422 (429)
T ss_pred ccCccccHHHHHHHHHHHHCCccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987544 22 478999999999998888776655443
No 33
>TIGR00771 DcuC c4-dicarboxylate anaerobic carrier family protein. catalyzing fumarate-succinate exchange and fumarate uptake.
Probab=99.52 E-value=1.9e-11 Score=130.15 Aligned_cols=323 Identities=9% Similarity=0.028 Sum_probs=191.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc-----CCchHHHHHHHHHHHHHHhhccchhHH-----HHHHHHHHH
Q 045863 204 EVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT-----RKPRTLLWVIGFVTFFLSSILDNLTST-----IVMVSLLRK 273 (537)
Q Consensus 204 ~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~-----~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~im~PI~~~ 273 (537)
...++-.+++.++.++..|++.|.+|.+.+.+.| +++..+.....+++.+++-+.++.++. ..++|++++
T Consensus 18 ~~~~~g~~i~~~~gf~~~M~~~G~~~~lv~~~~k~~~~~~~p~~v~~~t~~i~~~~~l~~~sat~~~li~~~~l~P~l~~ 97 (388)
T TIGR00771 18 RIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGMLLMVTLFPTLVS 97 (388)
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHH
Confidence 3458889999999999999999999999998754 688999999999999999999998887 345688888
Q ss_pred hCCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHH-hhHHHHHHHHHHHHHHHhh-ccccCCCcC
Q 045863 274 LVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKS-LFIPSAVSLAVPLAFLSLT-SEVNGKGQE 351 (537)
Q Consensus 274 l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~-~~pp~lv~l~v~~~ll~~~-~~~~~~~~~ 351 (537)
++-+... . +...+++.+-...|+|.+.+ ......+.+..|++.. ..|..+..++......|+. |+.+++...
T Consensus 98 ~G~~~~~----a-aavia~~~~l~i~P~~~~~~-~aa~~~~~~~~~~~~~~~ip~~i~~i~~~~~~~~~~~k~~~kr~~~ 171 (388)
T TIGR00771 98 LGVSRLS----A-VAVMASPGSIHSAMISEMSG-LAAQQVNMSHAPYNFHYMLPGAIGAIILTAIAHFFKQRGEDKKQAY 171 (388)
T ss_pred cCCCHHH----H-HHHHHhhhcccCCCcchHHH-HHHHHhCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccchhccc
Confidence 8422222 1 22233332335888888866 5555568999995444 4444444444443333443 222222111
Q ss_pred C--ccccccccCCchhHHHHHHHHHHHHHHHHHhhhcC---CChHHHHHHHHHH--HHHHhhh--ccccchhhccCCHHH
Q 045863 352 S--SNVLASEQMAPRGQLVFAVGIGALIFVPVFKALTG---LPPYMGILLGLGV--LWILTDA--IHYGESERQKLKVPQ 422 (537)
Q Consensus 352 ~--~~l~~~~~i~~~~~~~~~l~l~~lill~i~~~~~g---i~~~~valiga~l--Lll~~~v--l~~~~~~~~~i~~~~ 422 (537)
. ++.++++.-++++.++..+-+.-++++..+.+... ++.+..+..+..+ .+..-.+ +++++..+ +.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~allpl~p~iil~l~~g~~t~~~~~~~~~~~v~v~~~~~l~~~~~r~~n~~~~~~---~~~~ 248 (388)
T TIGR00771 172 IAHEKESEIKVIEGVPVLYAILPLIPLIILLLFIGGTGLQQVPLHEWTKMGVPQAMLIGAEFGRIVNRISPVK---ITEE 248 (388)
T ss_pred ccccccccchhhcccchHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHHHHHHHHHHHHHcCHHHHHH---HHHH
Confidence 0 11111111123344444422222212224444433 5445555565544 3221110 11111000 1112
Q ss_pred Hhh---cCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHH----HHHHHHHHHHhH-chHHHHHHHHhhhh-
Q 045863 423 ALS---RIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDL----IASAIGVVSAVI-DNVPLVAATMGMYD- 493 (537)
Q Consensus 423 ~l~---~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~----i~~i~~~lS~~i-sNtp~va~llpv~~- 493 (537)
.++ +..-.+++.+.+..+....|+.+|+.+.+++.+.+...+.+. +.++..+++.++ ++++...++.|+..
T Consensus 249 ~~~~~a~~~~~v~~iI~aA~vF~~~L~~~Gi~~~l~~~l~~~~~~~~~~ll~~~l~~~~lg~~~~s~~a~~~~~~PIl~p 328 (388)
T TIGR00771 249 FFNGMGNSFANVVGLIVAASVFAAGLKTIGAVDAAISFAKESGLGNIFVMWGATIGPFLMALITGSGNAPFIAFNTAIPP 328 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 222 122224455555555689999999999999999887433332 233445578899 57999988888873
Q ss_pred -ccCCCCC-hHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 494 -LTSFPQD-SKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 494 -~~~~~~~-~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
..+.+.+ ..+...+.++.++|-...|+| +.-.+..|.+|++.
T Consensus 329 ia~~~Gidpv~~gi~~~i~~~iG~~tpPv~-~~l~v~~gia~v~~ 372 (388)
T TIGR00771 329 HAVELGYTHVNLGMPMAIAGALGRTASPIA-GVVVVCAGLAMVSP 372 (388)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhCcCCcHH-HHHHHHHhhcCCCH
Confidence 2333433 344455677777888888998 77778888887764
No 34
>cd01118 ArsB_permease Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in eubacteria and archaea. A typical ArsB permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump (ArsAB). The ArsAB complex is similar in many ways to ATP-binding cassette transporters, which have two groups of six transmembrane-spanning helical segments and two nucleotide-binding domains. The ArsB proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life.
Probab=99.50 E-value=1.1e-12 Score=140.89 Aligned_cols=179 Identities=20% Similarity=0.179 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHhhcccCcchHHHHH-HHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhCh
Q 045863 149 ALLFGIGYTGIIFEESLAFNKSGVGL-LMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQG 227 (537)
Q Consensus 149 l~IFv~~i~~ii~e~~l~ip~~~val-~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl 227 (537)
+.+++.++.++.....++.+....+. .++.++.+.+..+..+.+|+.+.++| ++++++.|+|.++.+++++|+
T Consensus 226 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~w------~~ll~f~g~f~l~~al~~tG~ 299 (416)
T cd01118 226 WTLLVLLVVSAFGVDILLIPPSFIAGVLALIFLLLARRGGAINPLKVLKEAPW------GVLLFSLGLYVVVFGLKNAGL 299 (416)
T ss_pred HHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHcCCCCCCHHHHHHhCCH------HHHHHHHHHHHHHHHHHHcCH
Confidence 33344444455554445555555444 44444444332111267777766766 999999999999999999999
Q ss_pred HHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccch
Q 045863 228 FKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDV 304 (537)
Q Consensus 228 ~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~ 304 (537)
.++++..+.+ .++......+.+++.++|.+++|.+++.++.|++....+|... ..++++++|+||..||+|++
T Consensus 300 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~vls~~isNvp~~~l~~p~~~~~~~~~~~----~~~l~~g~~~gg~~t~~gs~ 375 (416)
T cd01118 300 TAILADLLNWLVSQGLLAAILGVGLLAAFLSNVMNNLPAVLIGALALAAGHAPEAL----VYANLIGVDLGPKLTPIGSL 375 (416)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHhcccccHHH----HHHHHHhcccCcccchHHHH
Confidence 9999998743 4555556677889999999999999999999998764343322 35789999999999999999
Q ss_pred hhhhhHh-----cccCChHHHHHHhhHHHHHHHHHHHH
Q 045863 305 TTTMLWI-----HGQISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 305 ~Nll~~~-----~~~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
+|++..+ ..+++|.||+++++|.+++.+++.+.
T Consensus 376 an~i~~~~~~~~~~~~~~~~f~k~g~~~~~~~l~~~~~ 413 (416)
T cd01118 376 ATLLWLHVLRRKGIRVSWGYYLKVGLIVTPPVLVVTLA 413 (416)
T ss_pred HHHHHHHHHHHCCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 9988543 24699999999999998887776554
No 35
>PF06450 NhaB: Bacterial Na+/H+ antiporter B (NhaB); InterPro: IPR004671 The Escherichia coli NhaB Na+:H+ Antiporter (NhaB) protein has 12 predicted TMS, and catalyses sodium/proton exchange. Unlike NhaA, IPR004670 from INTERPRO, this activity is not pH dependent.; GO: 0015385 sodium:hydrogen antiporter activity, 0006814 sodium ion transport, 0016021 integral to membrane
Probab=99.49 E-value=7.2e-12 Score=128.77 Aligned_cols=388 Identities=15% Similarity=0.169 Sum_probs=221.1
Q ss_pred chhhhcccccchhhHHHHHHHHHHHH-hhh--hhccCchhhHHHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHH
Q 045863 105 SSDFEANYQPKTDLLKALAVFAAAIT-GAV--AINHSWVAANQDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLW 181 (537)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~p~g~~~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~ 181 (537)
.|-|-.++-.+...|--..+++..++ =++ .+.|--. +|..++=|+.|...- .+- .|.---++++.=..
T Consensus 6 ~~Af~~NFLG~sP~WYK~~Ii~FLiiNPi~~~~~~Pfva----GWlLv~EFIFTLAMA-LKC---YPLqpGGLLAiEAv- 76 (515)
T PF06450_consen 6 GQAFFKNFLGNSPDWYKLTIIAFLIINPILFFFVGPFVA----GWLLVAEFIFTLAMA-LKC---YPLQPGGLLAIEAV- 76 (515)
T ss_pred HHHHHHhcCCCCchHHHHHHHHHHHHhHHHHHhcChHHH----HHHHHHHHHHHHHHH-Hhc---CCCCCCcHHHHHHH-
Confidence 44566666666553333333333222 001 2222222 699998888886554 444 44433344433322
Q ss_pred HHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHH-HHHHHhc-CCchHHHHHHHHHHHHHHhhcc
Q 045863 182 IVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKL-VTDNITT-RKPRTLLWVIGFVTFFLSSILD 259 (537)
Q Consensus 182 v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~r-ia~~l~~-~~~~~l~~~l~l~~~~lS~fl~ 259 (537)
+.| -.+++.+++++..++ +.+++++ |+++...---.+.-. ..+.+.+ ++...+.+.+++.++++|+|+|
T Consensus 77 ~iG---mTsp~~v~hEi~~N~----eViLLL~--FMVAGIYFMK~lLlf~FTklLl~irSK~~LSL~Fc~~aAfLSAFLD 147 (515)
T PF06450_consen 77 AIG---MTSPEQVYHEIAANF----EVILLLM--FMVAGIYFMKQLLLFVFTKLLLKIRSKIVLSLAFCFAAAFLSAFLD 147 (515)
T ss_pred HHc---CCCHHHHHHHHHhCh----HHHHHHH--HHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 223 348888888776532 6665554 444444333333333 3333344 4566778999999999999999
Q ss_pred chhHHHHHHHH-------HHHh--C----------CC-----------hh---HHHHHHHHHHHHHhhccccccccchhh
Q 045863 260 NLTSTIVMVSL-------LRKL--V----------PP-----------SE---YRKLLGAVVVIAANAGGAWTPIGDVTT 306 (537)
Q Consensus 260 N~ta~~im~PI-------~~~l--~----------~p-----------~~---~~~~~l~~va~aan~Gg~~TpiG~~~N 306 (537)
..|++++++.+ ++|. . ++ ++ +.|.++|--+.+..+||.+|.+|.|+|
T Consensus 148 ALTV~AViIsVa~GFY~iYHkvaSg~~~~~~~d~~~D~~v~~~~r~~Le~FRaFLRsLmMH~~VGTALGGV~TmVGEPQN 227 (515)
T PF06450_consen 148 ALTVTAVIISVAVGFYSIYHKVASGKDFHDDHDHTDDSKVDELNREDLEQFRAFLRSLMMHAAVGTALGGVMTMVGEPQN 227 (515)
T ss_pred hhhhheeeeEeeehhhhhhhhhhcCCCCCCccCCccchhhhhhhHHHHHHHHHHHHHHHHhcccchhhcceeeecCCchh
Confidence 99999776544 3332 0 00 00 113356778888889999999999999
Q ss_pred hhhHhcccCChHHHHHHhhHHHH---HHHHHHHHHHHhh------ccccCCCcCC-cc--ccccccCCchhHHHHHH-HH
Q 045863 307 TMLWIHGQISTLPTMKSLFIPSA---VSLAVPLAFLSLT------SEVNGKGQES-SN--VLASEQMAPRGQLVFAV-GI 373 (537)
Q Consensus 307 ll~~~~~~isf~~~~~~~~pp~l---v~l~v~~~ll~~~------~~~~~~~~~~-~~--l~~~~~i~~~~~~~~~l-~l 373 (537)
+++++..+.+|.||+..+.|.++ ++.++...++-.+ .++|++.+.. ++ .+++.+.+++++..+.+ .+
T Consensus 228 LiIa~~agW~F~eFflrmaPVt~PVl~~Gl~tc~l~Ek~~~fGYG~~lP~~Vr~iL~~~~~~~~~~rt~~~~~~L~vQa~ 307 (515)
T PF06450_consen 228 LIIAKQAGWDFGEFFLRMAPVTLPVLICGLLTCVLVEKFKWFGYGAKLPENVRQILEEFDKEEDAKRTKQDKAKLIVQAL 307 (515)
T ss_pred hhhhhhcCCCHHHHHHhhccchHHHHHHHHHHHHHHHHhhhcCCcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999998654 3333333233111 1123222110 01 12233444555444433 23
Q ss_pred HHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh-cCChHHHHHHHHHHHHHHHHHHhcHHH
Q 045863 374 GALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS-RIDTQGALFFLGILLSVSSLEAAGLLR 452 (537)
Q Consensus 374 ~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~-~v~W~tLl~f~glf~l~~~L~~tG~~~ 452 (537)
..+|+. ++ +....+-+.++|+.+..+....-...+|+ ...++++ ..|...++ .-.|.++..+.+..+.+
T Consensus 308 ~~vwLi--~~--LA~HlA~VGlIGLsVIil~Taf~Git~EH----~iGkAFeEaLPFTALL--~VFF~vVaVI~dQ~LF~ 377 (515)
T PF06450_consen 308 IGVWLI--VA--LAFHLAEVGLIGLSVIILATAFCGITDEH----AIGKAFEEALPFTALL--VVFFAVVAVIIDQHLFT 377 (515)
T ss_pred HHHHHH--HH--HHHHHHHHhHHHHHHHHHHHHhcCCcchh----hhhHhHhhccchHHHH--HHHHHHHHHHhhhhhhH
Confidence 222221 11 11335567788887665554211001111 2345555 57776655 44677788889999998
Q ss_pred HHHHHHHhhhhhh--HHHHHHHHHHHHhHchHHHHHHHHhhhh--c-cCCCCChHHHHHHHHHHHHhhhhhHHh
Q 045863 453 EIANYLDAHISNI--DLIASAIGVVSAVIDNVPLVAATMGMYD--L-TSFPQDSKFWQLIAYCAGTGGSMLIIG 521 (537)
Q Consensus 453 ~la~~l~~~i~~~--~~i~~i~~~lS~~isNtp~va~llpv~~--~-~~~~~~~~~~laLa~~a~iGg~lTpiG 521 (537)
-+-+++...-+.. ..+++.-+++|.+.||+-+....+.-.. . .|. ......-.++.+.|.|.|+..++
T Consensus 378 PiI~~VL~~~~~~Ql~~fy~aNGlLS~iSDNVFV~TVYI~E~k~A~~~G~-Is~~qf~~LAVAINTGTNlPSVA 450 (515)
T PF06450_consen 378 PIIQFVLSAEGSSQLAMFYIANGLLSMISDNVFVATVYINEVKAALDAGV-ISREQFDLLAVAINTGTNLPSVA 450 (515)
T ss_pred HHHHHHHcCCCccchhHHHHhhhhHHhhccceeEEEEeHhhHHHHHHcCC-cCHHHHhhHHhhhhcCCCCCcCc
Confidence 8888887765443 3467788999999999744322222111 1 121 13445556788889998874444
No 36
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=99.48 E-value=7.6e-11 Score=126.40 Aligned_cols=137 Identities=10% Similarity=0.207 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHH---hcCCchHHHHHHHHHHHHHHhhccchh-HHHHHHHHHHHh-----CCC
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNI---TTRKPRTLLWVIGFVTFFLSSILDNLT-STIVMVSLLRKL-----VPP 277 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l---~~~~~~~l~~~l~l~~~~lS~fl~N~t-a~~im~PI~~~l-----~~p 277 (537)
+.++++++.+..+++++++|..|++.+++ .++++++..+ +..+...++.|++|+. ++..++|++..+ .+|
T Consensus 49 ~vil~Ilav~~~~a~Lq~TGgld~lv~~~~k~lrk~pk~i~l-lap~vt~l~afl~~Tg~~v~~~lPVi~~vA~k~gi~P 127 (443)
T PRK12489 49 DVMLIILAVVTASATLQAAGGLDVMLQIAERLLRRNPKYITI-LAPFVTYTLTFLCGTGHVVYSILPIIYDVALKNGIRP 127 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccChhHHHH-HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHcCCCh
Confidence 88999999999999999999999999955 4678888887 5556666669999997 689999997544 344
Q ss_pred hhHHHHHHHHHHHHHhhccccccccchhhhhh---Hhc----ccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCC
Q 045863 278 SEYRKLLGAVVVIAANAGGAWTPIGDVTTTML---WIH----GQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGK 348 (537)
Q Consensus 278 ~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~---~~~----~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~ 348 (537)
++. ++...+++.+|...||++..+|.++ .+. .+++++|+.....|..++..+...++.+++ |+++++
T Consensus 128 srp----La~as~As~lGi~aSpin~~v~~l~~~l~~~~~~~~g~~~f~il~VgIP~~~ig~l~~~l~~~~~gk~l~~D 202 (443)
T PRK12489 128 ERP----MAAASVASQMGITASPVSAAVVSLVAMLGNVTGEGRHITLLDILAVTIPATLIGVLAAALWSLRRGKDLDKD 202 (443)
T ss_pred hhh----HHHHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC
Confidence 442 5678889999999999988888763 221 468899999877777777666555444444 555443
No 37
>PF00939 Na_sulph_symp: Sodium:sulfate symporter transmembrane region; InterPro: IPR001898 Integral membrane proteins that mediate the intake of a wide variety of molecules with the concomitant uptake of sodium ions (sodium symporters) can be grouped, on the basis of sequence and functional similarities into a number of distinct families. One of these families currently consists of the following proteins: Mammalian sodium/sulphate cotransporter []. Mammalian renal sodium/dicarboxylate cotransporter [], which transports succinate and citrate. Mammalian intestinal sodium/dicarboxylate cotransporter. Chlamydomonas reinhardtii putative sulphur deprivation response regulator SAC1 []. Caenorhabditis elegans hypothetical proteins B0285.6, F31F6.6, K08E5.2 and R107.1. Escherichia coli hypothetical protein yfbS. Haemophilus influenzae hypothetical protein HI0608. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0640. Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ0672. These transporters are proteins of from 430 to 620 amino acids which are highly hydrophobic and which probably contain about 12 transmembrane regions.; GO: 0005215 transporter activity, 0006814 sodium ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=99.47 E-value=9.5e-13 Score=143.67 Aligned_cols=183 Identities=15% Similarity=0.213 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHH-HHHhhhhhccchhHHHHHHHHHHHHHHH
Q 045863 144 QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIA-VSELSRASAEVSEIVFFLLGAMTIVEIV 222 (537)
Q Consensus 144 ~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a-~~~~~~~ls~~~~~I~li~g~~ii~~~l 222 (537)
+.+.++++|++++++|++++..|++.+.++++++.++.+.+++ +.+|. .++++| ++++++.|.+.++.++
T Consensus 267 ~Ek~~~~i~~~~i~lw~~~~~~~i~~~~va~~~~~ll~~~~il---~~~d~~~~~i~W------~~l~~~~g~~~lg~~l 337 (471)
T PF00939_consen 267 KEKKVLVIFLLTILLWITESFHGIDPAIVALLGAVLLFLPGIL---TWKDAAQKKIPW------GTLFLFGGALSLGTAL 337 (471)
T ss_pred hHhhhhhhhhhhhhcccCcccCCCCHHHHHHHHHHHHHHHHhc---cHHHHHhcCCCc------hhHHHHHHHHHHHHHH
Confidence 4788999999999999999988899999999999999999987 67764 345655 9999999999999999
Q ss_pred HHhChHHHHHHHHhc----CCchHHH-HHHHHHHHHHHhhccchhHHHHHHHHHHHh---C-CChhHHHHHHHHHHHHHh
Q 045863 223 DAHQGFKLVTDNITT----RKPRTLL-WVIGFVTFFLSSILDNLTSTIVMVSLLRKL---V-PPSEYRKLLGAVVVIAAN 293 (537)
Q Consensus 223 ~~tGl~~ria~~l~~----~~~~~l~-~~l~l~~~~lS~fl~N~ta~~im~PI~~~l---~-~p~~~~~~~l~~va~aan 293 (537)
+++|+.+++++.+.+ .++.... ..+.+...+.+.+++|+++..++.|++..+ . .-++. ...+.++++++
T Consensus 338 ~~sG~~~~la~~l~~~l~~~~~~~~~~~i~~~~~~~~~~~~s~~a~~~il~Pi~~~~a~~~~g~~p~--~~~l~~~~~~~ 415 (471)
T PF00939_consen 338 EKSGAAKWLANVLLPLLGGLSPFLVVLVILLVTVLLLTNFMSNTATVAILIPIVISLAAALGGINPL--ALALIVAFASS 415 (471)
T ss_pred HhcCHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhhhccCCChH--HHHHHHHHHhh
Confidence 999999999998843 3444443 334444566788899999999999987544 1 11122 23457778888
Q ss_pred hccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHH
Q 045863 294 AGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 294 ~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
.++.++|+++|+|.++.+.++++..|++|.+.+..++..++...
T Consensus 416 ~~~~~lP~~sp~~~i~~~~g~~~~~d~~k~G~~~~ii~~iv~~~ 459 (471)
T PF00939_consen 416 FAGFLLPYSSPPNAIAYGTGYYKFKDFIKYGFPLTIIAIIVIIL 459 (471)
T ss_pred hccccCCcCCcceeEEEcCCCCCHHHHHHHhHHHHHHHHHHHHH
Confidence 77789999999999999888999999999999988877764443
No 38
>KOG2639 consensus Sodium sulfate symporter and related arsenite permeases [Inorganic ion transport and metabolism]
Probab=99.47 E-value=2.4e-12 Score=136.50 Aligned_cols=163 Identities=21% Similarity=0.219 Sum_probs=127.2
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHh------c--
Q 045863 166 AFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIT------T-- 237 (537)
Q Consensus 166 ~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~------~-- 237 (537)
+++.+++|++|+.+++++-=+ .|.+...+.++| .+++|+.++|++.++++|.|+.+++.+... +
T Consensus 494 gl~LgW~AIlgA~llLIl~d~--~D~e~il~rVew------s~LLFfaalFI~~e~v~~lGli~~l~dlte~vil~v~e~ 565 (685)
T KOG2639|consen 494 GLSLGWTAILGAILLLILADI--KDIEAILHRVEW------STLLFFAALFILMEAVDKLGLIEWLGDLTEPVILSVGES 565 (685)
T ss_pred CCCccHHHHHHHHHHHHHhch--hhHHHHHHHhhH------HHHHHHHHHHHHHHHHHhhCHHHHHHHhhhHHhhhcchh
Confidence 378999999999888775511 244445555555 999999999999999999999999998652 1
Q ss_pred CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh------CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHh
Q 045863 238 RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL------VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI 311 (537)
Q Consensus 238 ~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l------~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~ 311 (537)
++...-+..+.+++++.|+|++|.+.+.+|++++.++ ..|.+. +..+.+++++.||..|++|...|.+++.
T Consensus 566 ~~~~vAi~iilw~SAlasafidNipvt~~mVkl~~~lv~~~~~glpl~p---liWaL~~ga~~gGNgTLiGasANvv~A~ 642 (685)
T KOG2639|consen 566 YRLMVAIVIILWVSALASAFIDNIPVTAIMVKLLTSLVANSAVGLPLQP---LIWALALGACLGGNGTLIGASANVVAAG 642 (685)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHhhccccCCCcch---HHHHHHhhhhhcCCceeechhhHHHHHH
Confidence 2333345667788999999999999999999998655 233222 2457788889999999999999988765
Q ss_pred -----cccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 312 -----HGQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 312 -----~~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
+.+++|.+|++.++|.++....+..+++
T Consensus 643 iAeqHGYkltF~~fF~~GfPmml~si~i~t~yL 675 (685)
T KOG2639|consen 643 IAEQHGYKLTFTQFFKVGFPMMLGSITIGTVYL 675 (685)
T ss_pred HHHHcCceEEehhHHHhcccHHHHHHHHHHHHH
Confidence 2478999999999999988777665544
No 39
>PRK10654 dcuC C4-dicarboxylate transporter DcuC; Provisional
Probab=99.47 E-value=5.2e-10 Score=121.11 Aligned_cols=315 Identities=10% Similarity=0.099 Sum_probs=184.7
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhc-----CCchHHHHHHHHHHHHHHhhccchhHH-----HHHHHHHHHhCC
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITT-----RKPRTLLWVIGFVTFFLSSILDNLTST-----IVMVSLLRKLVP 276 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~-----~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~im~PI~~~l~~ 276 (537)
.....++..+.++..|+++|..|.+.+...| |+|+.++...++++.+++.+++|.+.. ++++|+.++++-
T Consensus 78 ~lGl~Im~~~gFa~yM~~iGa~~~lv~l~~~pl~~ir~p~~~l~~~~l~~~~~~~~i~Sa~glg~~lm~~l~Pvl~~~Gv 157 (455)
T PRK10654 78 DLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGI 157 (455)
T ss_pred cHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhCCC
Confidence 5556688888899999999999998887643 467778888899999999999887776 236799999843
Q ss_pred ChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHH-HHHHHHHHHHHhhcc-ccCCCcCCcc
Q 045863 277 PSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSA-VSLAVPLAFLSLTSE-VNGKGQESSN 354 (537)
Q Consensus 277 p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~l-v~l~v~~~ll~~~~~-~~~~~~~~~~ 354 (537)
+... ..+ ..++..|--+.|..+.+| ++.+..+++..|++..--.|.. ..+++..+..+++.+ .+++++...+
T Consensus 158 ~~~~----aa~-v~~~~~g~~~~P~s~~~~-laA~~~g~~~~~~~~~~~~p~~i~~~i~~~i~~~~~~~~~dkk~~~~~~ 231 (455)
T PRK10654 158 SRGA----AAA-ICASPAAIILSPTSGDVV-LAAEASEMPLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKENISHE 231 (455)
T ss_pred CHHH----HHH-HHHHHhcccCCCCcchHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcccccc
Confidence 3232 122 345555666999888886 7777778998887765555544 333332222233211 1111110000
Q ss_pred ccccccCCchhHHHHHHH-HHHHHHHHHHhhhcCCChHHHH--HHHHHHHHHHhhhccccchhhccCCHHHHhhcCCh--
Q 045863 355 VLASEQMAPRGQLVFAVG-IGALIFVPVFKALTGLPPYMGI--LLGLGVLWILTDAIHYGESERQKLKVPQALSRIDT-- 429 (537)
Q Consensus 355 l~~~~~i~~~~~~~~~l~-l~~lill~i~~~~~gi~~~~va--liga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W-- 429 (537)
.++.++.+++...+.++. ++-++++.++.+..+...+... ++...+-.+.. .+ |+.++||..+.+++
T Consensus 232 ~~~~~~~~~~~p~~yallPllPLilll~f~~~~~~~~~v~~~~~~s~~i~~~~~-~~-------r~~~~k~v~~~l~~~~ 303 (455)
T PRK10654 232 MLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLLAAVLE-FL-------RSFNTKKVFSGLEVAY 303 (455)
T ss_pred ccccchhccccccHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHHH-HH-------hCCCHHHHHHHHHHHH
Confidence 001111111101112211 1112122223433222222222 11211111211 11 23578888776666
Q ss_pred --------HHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHH----HHHHHHHHHHhH-chHHHHHHHHhhhh--c
Q 045863 430 --------QGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDL----IASAIGVVSAVI-DNVPLVAATMGMYD--L 494 (537)
Q Consensus 430 --------~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~----i~~i~~~lS~~i-sNtp~va~llpv~~--~ 494 (537)
+++..+.+.-..+.+++.+|+.+.+.+.+.+.-.+... +..+..+.+... +|.+...++.|+.. .
T Consensus 304 ~GMg~~~a~Vv~liiaAgvfs~gL~~~Gl~~~l~~~l~~lg~~~~~illv~~il~~l~~~~~GSg~a~~~af~pi~~pia 383 (455)
T PRK10654 304 RGMADAFAGVVMLLVAAGVFAQGLSTIGFIQSLISLATSFGSAGIILMLVLVILTMLAAITTGSGNAPFYAFVELIPKLA 383 (455)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 47777777777899999999999999999886433332 234445556666 77877777777762 1
Q ss_pred cCCCCC-hHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 495 TSFPQD-SKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 495 ~~~~~~-~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
.+.+.+ ..+...+..++++|.+..|++ +.-++..|.+|++.
T Consensus 384 ~~lG~~pv~~~~~~~~~~~~G~~~sPvs-~~ii~~ag~a~~~~ 425 (455)
T PRK10654 384 HSSGINPAYLTIPMLQASNLGRTISPVS-GVVVAVAGMAKISP 425 (455)
T ss_pred HHcCCCHHHHHHHHHHHHHHhCcCCcch-hhHhhhhcccCCCH
Confidence 233333 344456788888999888887 44445556666653
No 40
>COG0471 CitT Di- and tricarboxylate transporters [Inorganic ion transport and metabolism]
Probab=99.46 E-value=2.6e-12 Score=139.82 Aligned_cols=183 Identities=18% Similarity=0.221 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCc-chHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH
Q 045863 144 QDLAMALLFGIGYTGIIFEESLAF-NKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIV 222 (537)
Q Consensus 144 ~~~~~l~IFv~~i~~ii~e~~l~i-p~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l 222 (537)
+.+..+.+|+.+...|+++..++. +...+++++..++.+.++. ..+|+++.++| ++++++.|++.++.++
T Consensus 261 ~~~l~~~i~~l~~~~w~~~~~~~~~~~~~~ali~~~~~~~~~vl---~~~~~~~~i~W------~~lilf~g~i~l~~~l 331 (461)
T COG0471 261 DEKLLLGIFLLLLLLWIFGKLLGKIDATLIALIPVALLLLAGVL---TWKEVYKKIDW------GTLILFGGLIALGSAL 331 (461)
T ss_pred hhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHH---hHHHHHHhCCc------hHHHHHHHHHHHHHHH
Confidence 478999999999999999985543 5789999999999999987 66688888877 9999999999999999
Q ss_pred HHhChHHHHHHHHhc----CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHh
Q 045863 223 DAHQGFKLVTDNITT----RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAAN 293 (537)
Q Consensus 223 ~~tGl~~ria~~l~~----~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan 293 (537)
+|+|..++++..+.. ..+..+...+++.+.+++.|++|++++..|.|+...+ .+| . .+++.++.+ +
T Consensus 332 ~~tG~~~~i~~~l~~~~~~~~~~~il~~~~~~~~~~~~f~SntA~~~~m~Pi~~~ia~~l~~~p--~--~~~~~v~~~-a 406 (461)
T COG0471 332 SKTGAIAWIAGLLAGSLGGLGPFAILLLLLLLTLVLTLFASNTATAIAMVPIAIALASALGGAP--L--LLLMLVAVS-A 406 (461)
T ss_pred HhcCHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCCc--h--HHHHHHHHH-H
Confidence 999999999998853 2467778889999999999999999999999997543 233 2 233444444 4
Q ss_pred hccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHH
Q 045863 294 AGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLS 340 (537)
Q Consensus 294 ~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~ 340 (537)
.++.+||+|+|+|.++.+.+++++.||.+.+.|..+++.++...+.+
T Consensus 407 s~~~~tpv~~~~n~iv~g~G~~k~~d~~~~G~~l~~v~~iv~i~~~~ 453 (461)
T COG0471 407 SGGFLTPVGSPPNPIALGSGYVKFKDWWKVGFILSIVLIIVLLVIGL 453 (461)
T ss_pred hhhhhcCCCCCCCceEECCCCccHHHHHHhccHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999998887775554443
No 41
>PRK09547 nhaB sodium/proton antiporter; Reviewed
Probab=99.45 E-value=2.8e-12 Score=138.67 Aligned_cols=166 Identities=17% Similarity=0.147 Sum_probs=130.5
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHH-----hhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCch
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSE-----LSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPR 241 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~-----~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~ 241 (537)
++.+.++++|+.++++.+.....+.++.+.. ++| +++ ++|.|++.++++++|+++.++.++.+-...
T Consensus 318 l~~a~VaLiga~vill~~~~~~~~~e~~l~~~~~~~v~w------~tL--f~glFivV~~i~~~gl~~~i~~~~~~~~~~ 389 (513)
T PRK09547 318 LHLAEVGLIGLSVIILATAFTGVTDEHAIGKAFEEALPF------TAL--LTVFFAVVAVIIDQHLFAPIIQFVLQASEH 389 (513)
T ss_pred HhHHHHHHHHHHHHHHhhcccCCCHHHHHhhCcCCCCCh------HHH--HHHHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 6789999999988877762101267777665 433 666 999999999999999999999998642111
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh---C--CChhHHHHHHHHHHHHHhhccccccccchhhhhhH-h----
Q 045863 242 TLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL---V--PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLW-I---- 311 (537)
Q Consensus 242 ~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l---~--~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~-~---- 311 (537)
.....+.+.++++|++.||++.+.+|+|+++.+ . ++++.. .+-.+++.++|+||..||+|..+|+++. +
T Consensus 390 ~~~~~~~~~sgllSaiiDNVp~~~~~ip~v~~~~~~g~~~~~~~~-~L~~ALa~Ga~Lggn~T~iGasAnlv~~~~~~~~ 468 (513)
T PRK09547 390 AQLSLFYIANGLLSSISDNVFVGTVYINEAKAALESGAISRKQFE-LLAVAINTGTNLPSVATPNGQAAFLFLLTSALAP 468 (513)
T ss_pred ChHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHhcCCCccccch-HHHHHHHHhcccchhhhHHHHHHHHHHHHHHHhC
Confidence 127778899999999999999999999999876 1 221211 2235799999999999999999999877 4
Q ss_pred cccCChHHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 312 HGQISTLPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 312 ~~~isf~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
..++||.+|+++++|.+++..++.++++++
T Consensus 469 g~~isf~~~~k~glP~tlv~~~v~~~~v~~ 498 (513)
T PRK09547 469 LIRLSYGRMVWMALPYTIVLTLVGLLAVEF 498 (513)
T ss_pred CCcccHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 248999999999999999998888776654
No 42
>cd01117 YbiR_permease Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.
Probab=99.44 E-value=3.9e-12 Score=134.96 Aligned_cols=169 Identities=12% Similarity=0.158 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhCh
Q 045863 148 MALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQG 227 (537)
Q Consensus 148 ~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl 227 (537)
...+++.+++++.+... ..|...+++.+++++.+.+ . +.+|+.++++| ++++++.|++.++.+++++|.
T Consensus 208 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~~-~---~~~~~l~~i~w------~~ll~f~g~f~l~~~l~~~g~ 276 (384)
T cd01117 208 LLVLILLLLVAFLALLG-VIPLWTAALVAAVLLLLTR-L---KPRRVLKKVDW------GLLLFFAGLFILVGGFAQGLP 276 (384)
T ss_pred HHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHhc-C---CHHHHHHhCCc------hHHHHHHHHHHHHHHHHHhHH
Confidence 34444444444443321 1466667777777766666 4 77788777776 999999999999999998888
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchhhh
Q 045863 228 FKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTT 307 (537)
Q Consensus 228 ~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nl 307 (537)
.++++..+.. ......+.+++.++|.|+||++++.++.|+.... ++.. ...+++++|.||.+||+|+++|+
T Consensus 277 ~~~~~~~~~~---~~~~~~~~~~~~~lS~~isN~p~~~~~~pi~~~~-~~~~-----~~~l~~~~~~gg~~tpigs~an~ 347 (384)
T cd01117 277 LEGLSRLLPL---LDSVLSLFLVSIGLSQLISNVPAVLLLLPFLPSA-DEKD-----WLLLAAGSTIAGNLTLLGSAANL 347 (384)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhc-ccHH-----HHHHHHHhhcccccchhhHHHHH
Confidence 8888877653 3446677899999999999999999999999766 2211 24789999999999999999999
Q ss_pred hhHhcc-----cCChHHHHHHhhHHHHHHHHHHH
Q 045863 308 MLWIHG-----QISTLPTMKSLFIPSAVSLAVPL 336 (537)
Q Consensus 308 l~~~~~-----~isf~~~~~~~~pp~lv~l~v~~ 336 (537)
+..+.. +++|.||++++.|..++.+++.+
T Consensus 348 i~~~~~~~~g~~~~~~~~~k~g~~~~i~~~~~~~ 381 (384)
T cd01117 348 IVAEAAERRGVRLSFGEFLKYGVPLTLLTAAIGI 381 (384)
T ss_pred HHHHHHHHCCCCCcHHHHHHHhhHHHHHHHHHHH
Confidence 887743 67999999999999887766544
No 43
>TIGR00775 NhaD Na+/H+ antiporter, NhaD family. These proteins are members of the NhaD Na+:H+ Antiporter (NhaD) Family (TC 2.A.62). A single member of the NhaD family has been characterized. This protein is the NhaD protein of Vibrio parahaemolyticus which has 12 GES predicted transmembrane regions. It has been shown to catalyze Na+/H+ antiport, but Li+ can also be a substrate.
Probab=99.26 E-value=5.7e-11 Score=127.80 Aligned_cols=145 Identities=15% Similarity=0.208 Sum_probs=115.3
Q ss_pred HHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHH---h---hcCC-hHHHHHHHHHHHHHHHHHHhcHHH
Q 045863 380 PVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQA---L---SRID-TQGALFFLGILLSVSSLEAAGLLR 452 (537)
Q Consensus 380 ~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~---l---~~v~-W~tLl~f~glf~l~~~L~~tG~~~ 452 (537)
..+.+.++++-+.++++|+.++++++ .. +.+|+ . ..+| |++++++.|++.+++.++++|..+
T Consensus 17 i~~e~~~~~~r~~~al~ga~~~~~~~-~~----------~~~~~~~~~~~~~~~d~~~ti~~LfgmMiiv~~l~~~g~f~ 85 (420)
T TIGR00775 17 IVFEHIVRVNKSAIWLAMGGLMWLVC-FS----------HIPDVDHAALEEEIADMAQVIFFLFVAMAIVELIDAHKGFS 85 (420)
T ss_pred HHhcchhhhccHHHHHHHHHHHHHHH-cC----------ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHCCcHH
Confidence 34555567899999999999988876 32 22343 3 5689 999999999999999999999999
Q ss_pred HHHHHHHhhhhhh--HHHHHHHHHHHHhHchHHHHHHHHhhhh-ccCCCCChHHHHH--HHHHHHHhhhhhHHhHHHHHH
Q 045863 453 EIANYLDAHISNI--DLIASAIGVVSAVIDNVPLVAATMGMYD-LTSFPQDSKFWQL--IAYCAGTGGSMLIIGSAAGVA 527 (537)
Q Consensus 453 ~la~~l~~~i~~~--~~i~~i~~~lS~~isNtp~va~llpv~~-~~~~~~~~~~~la--La~~a~iGg~lTpiGS~an~i 527 (537)
+++..+.+..... +.+..+++++|+++||+.++..+.|+.. ..+.. +.++.++ .++++|+||..||+|.++|.+
T Consensus 86 ~la~~l~~~s~r~Ll~~l~l~t~~lSa~LdN~tt~ll~~Pv~l~i~~~~-~~~~ll~~~i~~AANiGG~~TpIGdP~Ni~ 164 (420)
T TIGR00775 86 ALVAWCVGKSRKKLLWLLGFLSFFLSAALDNLTSIIIIISILKRLVKAR-EDRLLLGAICVIAVNAGGAWTPLGDVTTTM 164 (420)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhccC-CccchHHhHHHHhcccccceeeCCCcchhH
Confidence 9999876654422 2356788999999999999999999973 23322 3345555 789999999999999999999
Q ss_pred HHhhcCccc
Q 045863 528 FMGMEKVDF 536 (537)
Q Consensus 528 ~~g~~~~~f 536 (537)
+....+++|
T Consensus 165 i~~~~~i~f 173 (420)
T TIGR00775 165 LWINGKIRF 173 (420)
T ss_pred hHhcCCCCH
Confidence 998778887
No 44
>PF03600 CitMHS: Citrate transporter; InterPro: IPR004680 Characterised proteins in this entry belong mostly to the divalent anion symporter family, which is found in bacteria, archaea and eukaryotes. Substrates shown to be transported by these proteins include citrate and phosphate []. This entry also contains the melanocyte-specific transporter protein P, mutation of which leads to albinism []. Another protein in this entry, SAC1, has been shown to regulate the sulphur deprivation response in Chlamydomonas by inducing cysteine biosynthesis, though its precise role in this induction is not known [].; GO: 0015137 citrate transmembrane transporter activity, 0015746 citrate transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.25 E-value=4.7e-11 Score=125.16 Aligned_cols=144 Identities=20% Similarity=0.292 Sum_probs=115.7
Q ss_pred hcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhh
Q 045863 385 LTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISN 464 (537)
Q Consensus 385 ~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~ 464 (537)
..++++...+.+++.++.+.+. ......+.+|..+.++|++++++.|++. +++++++|+.|++++.+.+..++
T Consensus 15 ~~~~~~~~~~~~~a~~~~l~g~------~~~~~~~~~~~~~~~~~~~l~ll~g~~~-~~~l~~tG~~~~ia~~i~~~~~~ 87 (351)
T PF03600_consen 15 RKKIPVVAAALLGALLVALFGF------PGFGVISPEEAFSFIDWNTLILLFGMMI-GAALEETGVFDWIARKIVRKSGG 87 (351)
T ss_pred HHhhhHHHHHHHHHHHHHHHHh------ccccccCHHHHHHHcchhHHHHHHHHHH-HHHHHHcCChHHHHHHHHhccCC
Confidence 3467777777776666655521 0012247789999999999999999999 99999999999999999988765
Q ss_pred hH-----HHHHHHHHHHHhHchHHHHHHHHhhhh----ccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCcc
Q 045863 465 ID-----LIASAIGVVSAVIDNVPLVAATMGMYD----LTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVD 535 (537)
Q Consensus 465 ~~-----~i~~i~~~lS~~isNtp~va~llpv~~----~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~ 535 (537)
.. .+.++++++|.+.||++++..+.|+.. ..+.+ +..+.+.+++++|+||.+||+|+++|.++.+..+++
T Consensus 88 ~~~~l~~~~~~~~~~lS~~~~N~~~v~~~~Pi~~~~~~~~~i~-~~~~l~~l~~~a~~gg~~t~iG~p~nl~i~~~~~~~ 166 (351)
T PF03600_consen 88 KPWRLLLLLMLVTALLSAFLDNTTVVLIMIPIVLSLARKLGIP-PSPLLMPLAFAANIGGMLTPIGNPTNLIIANASGLP 166 (351)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcchHHHhhHHHHHHHHHHcCCC-hHHHHHHHHHHhccccccCcCCCcchhhhhhhcccc
Confidence 42 246788999999999999999999873 23444 567788899999999999999999999998887777
Q ss_pred c
Q 045863 536 F 536 (537)
Q Consensus 536 f 536 (537)
|
T Consensus 167 ~ 167 (351)
T PF03600_consen 167 F 167 (351)
T ss_pred c
Confidence 6
No 45
>cd00625 ArsB_NhaD_permease Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.
Probab=99.25 E-value=3.7e-10 Score=120.05 Aligned_cols=178 Identities=19% Similarity=0.259 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhC
Q 045863 147 AMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQ 226 (537)
Q Consensus 147 ~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tG 226 (537)
....++.+++.++++... ++...++..++..+.+....+ .+.+|+.+.++| ++++++.|++.++.+++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~i~w------~~~~~~~~~~~l~~~l~~~G 279 (396)
T cd00625 209 LLLALLLLLLFVLLFFFL--IPLGLIALLGALLLLLLLVRG-LDPEEVLKSVDW------GTLLFFAGLFVLVGALESTG 279 (396)
T ss_pred HHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHhcCC-CCHHHHHHhCCC------cHHHHHHHHHHHHHHHHHcC
Confidence 334444444444443321 456666666666555544311 267788777766 99999999999999999999
Q ss_pred hHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccc
Q 045863 227 GFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGD 303 (537)
Q Consensus 227 l~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~ 303 (537)
..++++.++.+ .++......+.++..+++.|++|++++.++.|++..+.++ +. .......+++.++..|++|+
T Consensus 280 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~n~~~~~~~~Pi~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~s 355 (396)
T cd00625 280 LLEWLAELLVALVGLPPLAALLLIGLLSALLSNFISNVPTVALLLPIAASLAPP-EP---AWLALALGSTLGGNLTLIGS 355 (396)
T ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhcCc-hH---HHHHHHHHhccccccccccc
Confidence 99999998853 5777888889999999999999999999999998766422 21 13467888899999999999
Q ss_pred hhhhhhHhcc-----cCChHHHHHHhhHHHHHHHHHHHH
Q 045863 304 VTTTMLWIHG-----QISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 304 ~~Nll~~~~~-----~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
++|++..+.. ++++.||+++..|..++.+++.+.
T Consensus 356 ~a~~l~~~~~~~~~~~~~~~~~~k~g~~~~~~~~~~~~~ 394 (396)
T cd00625 356 LANLIPLGAAENAGVGISFGEFLKVGLPLTLLSLVVSLL 394 (396)
T ss_pred HHHHHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876632 589999999999998887765543
No 46
>PLN00137 NHAD transporter family protein; Provisional
Probab=99.23 E-value=3.6e-10 Score=121.72 Aligned_cols=167 Identities=18% Similarity=0.219 Sum_probs=122.0
Q ss_pred HhhcccCcchHHHHHHHHHHHHHHHhc---C-----CCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHH
Q 045863 160 IFEESLAFNKSGVGLLMAVSLWIVRSI---G-----APSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLV 231 (537)
Q Consensus 160 i~e~~l~ip~~~val~~~~~l~v~gvi---~-----~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ri 231 (537)
+++...|+|...+++.++.++++.+.. + ..+.+++++.++| +++++++|.|+++++++++|+.+.+
T Consensus 241 ~~~~~~gl~~~~~al~~~~~lll~~~~~~~~~~~~~~~~~~~~l~~Vdw------~tLlfF~GlFilvgal~~tG~~~~l 314 (424)
T PLN00137 241 VFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQALKVPQALSRIDT------QGILFFLGILLSVGSLDAAGILREL 314 (424)
T ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHhCCc------cHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 555556799999999888777664310 0 0256788888877 9999999999999999999999999
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhC-CChhHHHHHHHHHHHHHhhccccccccchhhhhhH
Q 045863 232 TDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLV-PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLW 310 (537)
Q Consensus 232 a~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~-~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~ 310 (537)
+.++....+. ...+...++++|+++||.++++.+.|+.+... ++... .-...++++|+||.+|++|+..|+++.
T Consensus 315 a~~l~~~~~~--~~~i~~~s~ilS~~IsNVP~~~~~~p~~~~~~~~~~~~---~w~aLalga~lGGn~tliGS~Anvi~~ 389 (424)
T PLN00137 315 ANYLDANIPN--VELIASAIGVASAIIDNVPLVAATMGMYDLTDYPMDSE---LWQLIALCAGTGGSLLVIGSAAGVAFM 389 (424)
T ss_pred HHHHHHhcCC--chhHHHHHHHHHHHhcchHHHHHHhhhhhhccCCcchH---HHHHHHHHhCccchHHHHHHHHHHHHH
Confidence 9988543111 12377788899999999999999999987221 11111 124789999999999999999999887
Q ss_pred hcccCChHHHHHHhhHHHHHHHHHHHH
Q 045863 311 IHGQISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 311 ~~~~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
+..+-.|.-++...-|..++..+..++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (424)
T PLN00137 390 GMEKVDFFWYLRKVSGFAFAGYVAGIA 416 (424)
T ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 755554444444455555555554443
No 47
>TIGR00791 gntP gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli.
Probab=99.22 E-value=6.3e-08 Score=105.10 Aligned_cols=168 Identities=8% Similarity=0.056 Sum_probs=107.8
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHH
Q 045863 166 AFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTL 243 (537)
Q Consensus 166 ~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l 243 (537)
+++.....++++++..++.-. +..+..+.+.+.+++.. +..+.++...++++.++++|..+++++.+.|. ..+|.
T Consensus 21 k~~~~ial~~~a~~~~l~~g~---~~~~~~~~i~~g~g~~~~~iglii~lg~~~g~~m~~sGaa~~ia~~i~~~~g~~r~ 97 (440)
T TIGR00791 21 KLNTFVALLVVSFGVGLASGM---PLDKVVHSIEAGIGGTLGFLALIVGLGAMLGKLLADSGAAQRIALTLLAKFGKSRV 97 (440)
T ss_pred cccHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhcccch
Confidence 388888888887777666532 55666666666555443 88888889999999999999999999998763 44566
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHh----CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHH
Q 045863 244 LWVIGFVTFFLSSILDNLTSTIVMVSLLRKL----VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLP 319 (537)
Q Consensus 244 ~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l----~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~ 319 (537)
.+.+++.+++++...--+....++.|+++.+ ..+... +.+..+.+...+-...|-.-+++ .+.+..+.+..+
T Consensus 98 ~~a~~~~~~ilgi~~f~~~~~vil~Pi~~~l~~~~g~s~~~---~a~~~~~~~~~~~~~vPp~Pg~~-~~a~~~g~~~~~ 173 (440)
T TIGR00791 98 QWAVVIAGLIVGLALFFEVGFVLLIPLVFSIAAEAKISLLK---LGIPMVAALSVAHGFLPPHPGPT-AIANEYGADIGE 173 (440)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCChHH---HHHHHHHHHHHhceeCCCCccHH-HHHHHhCCCHHH
Confidence 6777766666654443344456778887654 222221 22333333333444455554454 555567888888
Q ss_pred HHHHhhHHHHHH-HHHHHHHHH
Q 045863 320 TMKSLFIPSAVS-LAVPLAFLS 340 (537)
Q Consensus 320 ~~~~~~pp~lv~-l~v~~~ll~ 340 (537)
++.++.+.++.. ++..+++..
T Consensus 174 ~~~~gl~~~i~~~i~~g~~~~~ 195 (440)
T TIGR00791 174 VLLYGLIVAIPTVIIAGPLFTK 195 (440)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 888888777764 334444333
No 48
>COG3067 NhaB Na+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=5.6e-09 Score=105.53 Aligned_cols=390 Identities=15% Similarity=0.133 Sum_probs=205.6
Q ss_pred chhhhcccccchh-hHHHHHHHHHHHH-hhhhhccCchhhHHHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHH
Q 045863 105 SSDFEANYQPKTD-LLKALAVFAAAIT-GAVAINHSWVAANQDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWI 182 (537)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~p~g~~~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v 182 (537)
.|.|..++-.+.. |.|. ++++..++ =++.+.-+|- ..+|...+=|+.+...- .+- .|.---++++.=.. +
T Consensus 6 ~qAf~~NFLG~sP~WYKl-ai~~FLiiNP~vfff~~Pf--~agWlLV~EFIfTLAMA-LKC---YPLqPGGLLaieAv-~ 77 (516)
T COG3067 6 GQAFWRNFLGQSPDWYKL-AIIAFLIINPLIFFFISPF--VAGWLLVAEFIFTLAMA-LKC---YPLQPGGLLAIEAV-A 77 (516)
T ss_pred HHHHHHHhccCCCcHHHH-HHHHHHHHhhHHHHhccHH--HHHHHHHHHHHHHHHHH-hhc---cCCCCCchHHHHHH-H
Confidence 4556666666654 4443 33332221 1112222221 13688888888886544 443 34322233322222 2
Q ss_pred HHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHH-HHHhc-CCchHHHHHHHHHHHHHHhhccc
Q 045863 183 VRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVT-DNITT-RKPRTLLWVIGFVTFFLSSILDN 260 (537)
Q Consensus 183 ~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria-~~l~~-~~~~~l~~~l~l~~~~lS~fl~N 260 (537)
.| ..+++...+++..++ +.++++ +|+++..+--.++.-.+= +.+.+ ++...+-+.+++.++++|+|+|.
T Consensus 78 iG---mt~p~~v~~Ei~aN~----eVlLLL--~FMVAGIyFMKqLLLfiFtklLl~iRSK~~LSlaFc~~aAfLSAFLDA 148 (516)
T COG3067 78 IG---MTSPEHVKEEVAANL----EVLLLL--MFMVAGIYFMKQLLLFIFTRLLLSIRSKMLLSLAFCVAAAFLSAFLDA 148 (516)
T ss_pred Hc---CCCHHHHHHHHHhcc----HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23 347877777665522 444443 455555544333333222 22233 34556678899999999999999
Q ss_pred hhHHHHHHHH-------HHHh--C---------------CC------hhH---HHHHHHHHHHHHhhccccccccchhhh
Q 045863 261 LTSTIVMVSL-------LRKL--V---------------PP------SEY---RKLLGAVVVIAANAGGAWTPIGDVTTT 307 (537)
Q Consensus 261 ~ta~~im~PI-------~~~l--~---------------~p------~~~---~~~~l~~va~aan~Gg~~TpiG~~~Nl 307 (537)
.|++++.+.+ +++. . ++ +++ .|.++|-...+...||.+|.+|.|+|+
T Consensus 149 LTVvAVvISVavgFy~iYH~VaSg~~~~~~~D~~~D~~i~e~~~~~LE~fRaFLRSLmMHagVGTALGGVmTmVGEPQNL 228 (516)
T COG3067 149 LTVVAVVISVAVGFYGIYHRVASGRTESDDTDITDDSHIDEHYKVVLEQFRAFLRSLMMHAGVGTALGGVMTMVGEPQNL 228 (516)
T ss_pred hhheeeeeeehhhhhhhhhhhccCCCcccccCccccccCChHHHHHHHHHHHHHHHHHHhhccchhhcceeeeccCchhh
Confidence 9988766544 3332 0 00 011 123557777788889999999999999
Q ss_pred hhHhcccCChHHHHHHhhHHHH---HHHHHHHHHHHhhc------cccCCCcCC-ccc--cccccCCchhHHHHHH-HHH
Q 045863 308 MLWIHGQISTLPTMKSLFIPSA---VSLAVPLAFLSLTS------EVNGKGQES-SNV--LASEQMAPRGQLVFAV-GIG 374 (537)
Q Consensus 308 l~~~~~~isf~~~~~~~~pp~l---v~l~v~~~ll~~~~------~~~~~~~~~-~~l--~~~~~i~~~~~~~~~l-~l~ 374 (537)
+++...+..|.||+..+.|..+ ++.++...+.-.+| ++|++..+. .+. +++.+.+++++..+.+ .+.
T Consensus 229 iIa~~AgW~F~eFflrm~PVt~PV~i~GlltC~LvEKfr~FGYGa~LP~~Vr~vL~~~d~~~~~krt~Qdk~kL~vQa~i 308 (516)
T COG3067 229 IIAKQAGWHFGEFFLRMAPVTVPVLICGLLTCLLVEKFRWFGYGATLPEKVRQVLQQFDDQSRHKRTRQDKIKLIVQAII 308 (516)
T ss_pred hhhhhccccHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHhHHHHHhhhHHHHHHHHHHHHH
Confidence 9999999999999999988554 33333322232211 122221110 011 2333444555554433 222
Q ss_pred HHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh-cCChHHHHHHHHHHHHHHHHHHhcHHHH
Q 045863 375 ALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS-RIDTQGALFFLGILLSVSSLEAAGLLRE 453 (537)
Q Consensus 375 ~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~-~v~W~tLl~f~glf~l~~~L~~tG~~~~ 453 (537)
.+ |..-. +.+..+.+.++|+.+..+.... ....++ -...++++ ..|...++ .-.|..+..+-+..+..-
T Consensus 309 ~v---wLvvg-LAlHlA~VGliGLsvIilaTsf-tGvt~E---H~iGkAFqEsLPFTALL--~VFFsvVAVIidQ~LF~P 378 (516)
T COG3067 309 GV---WLVVG-LALHLAEVGLIGLSVIILATSF-TGVTDE---HAIGKAFQESLPFTALL--TVFFSVVAVIIDQHLFSP 378 (516)
T ss_pred HH---HHHHH-HHHHHHHHhhhhhHHHHHHHhh-cCCcch---hhhHHHHHhcCcHHHHH--HHHHHHHHHHHHhhhhHH
Confidence 22 22111 1134556777887765544321 100110 03345555 57776654 234555666666667666
Q ss_pred HHHHHHhhhhhh--HHHHHHHHHHHHhHchHHHHHHHHhhhh-ccCCC-CChHHHHHHHHHHHHhhhhhHHh
Q 045863 454 IANYLDAHISNI--DLIASAIGVVSAVIDNVPLVAATMGMYD-LTSFP-QDSKFWQLIAYCAGTGGSMLIIG 521 (537)
Q Consensus 454 la~~l~~~i~~~--~~i~~i~~~lS~~isNtp~va~llpv~~-~~~~~-~~~~~~laLa~~a~iGg~lTpiG 521 (537)
+-+.+.....+. ..+++.-+++|++.||+-+......-.. ....+ ......-.++.+.|.|.|+..++
T Consensus 379 iIqfVL~a~~~~Ql~lfyifNGLLS~iSDNVFV~TvYInE~k~Al~~G~is~~qfelLaVAINTGTNLPSVA 450 (516)
T COG3067 379 IIQFVLQASEHAQLSLFYIFNGLLSSISDNVFVGTIYINEAKAALEAGAISLKQFELLAVAINTGTNLPSVA 450 (516)
T ss_pred HHHHHHcCCcccchhHHHHHhhHHHhhccceEEEEEEehhHHHHHHcCCcCHHhhhHhhehhhcCCCCCccc
Confidence 666665544322 2567888999999999743221111110 11111 12334445777788888864333
No 49
>TIGR00774 NhaB Na+/H+ antiporter NhaB. These proteins are members of the NhaB Na+:H+ Antiporter (NhaB) Family (TC 2.A.34). The only characterised member of this family is the Escherichia coli NhaB protein, which has 12 GES predicted transmembrane regions, and catalyses sodium/proton exchange. Unlike NhaA this activity is not pH dependent.
Probab=99.16 E-value=1.2e-09 Score=116.06 Aligned_cols=170 Identities=17% Similarity=0.155 Sum_probs=128.2
Q ss_pred cchHHHHHHHHHHHHHHHhc-CCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSI-GAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLW 245 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi-~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~ 245 (537)
++.+.++++|..+..+.... |-.+....-++|++ --|---++.--|.++..+.+..+|+.+-.+....++..-..
T Consensus 317 ~h~a~vg~igl~vii~~t~~~g~~~eh~~g~af~e----alpftall~vff~~vavi~~q~lf~p~i~~vl~~~~~~q~~ 392 (515)
T TIGR00774 317 LHLAAVGLIGLSVIILATSFTGVTDEHSIGKAFEE----SLPFTALLAVFFSVVAVIIDQELFSPIIDFVLAAEEKTQLA 392 (515)
T ss_pred HHHHHHhHHHHHHHHHHHHhcCCcchhhhhHHHhh----hccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccchH
Confidence 77888888887766554321 21132222223333 33666677777888999999999999999987665666678
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHh---C--CChhHHHHHHHHHHHHHhhccccccccchhhhhhHh-----cccC
Q 045863 246 VIGFVTFFLSSILDNLTSTIVMVSLLRKL---V--PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI-----HGQI 315 (537)
Q Consensus 246 ~l~l~~~~lS~fl~N~ta~~im~PI~~~l---~--~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-----~~~i 315 (537)
.+.+.++++|+++||++.+++|+|+++.+ . ++++.. .+-.+++.++|+||+.||+|..+|+++.+ ..++
T Consensus 393 ~ilw~SgilSa~IDNVP~vatmIPvIk~l~~~G~~~~~~~~-~LWWALALGA~LGGNaTpiGAsANLVv~~iA~k~G~rI 471 (515)
T TIGR00774 393 LFYVFNGLLSSISDNVFVGTVYINEAKAALTEGLITREQFE-LLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRL 471 (515)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCcccccc-HHHHHHHHhccccccccHHHHHHHHHHHHHHHhCCCCc
Confidence 88899999999999999999999999876 1 111111 12357999999999999999999998766 2489
Q ss_pred ChHHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 316 STLPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 316 sf~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
||.||+++++|.+++.+++..+++++
T Consensus 472 SF~~flK~GlP~TLvsliVs~lyl~~ 497 (515)
T TIGR00774 472 SYGRMVYMALPYTIVLAIVGLLGIEF 497 (515)
T ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999998887766655
No 50
>PRK09804 putative cryptic C4-dicarboxylate transporter DcuD; Provisional
Probab=99.10 E-value=5.2e-07 Score=96.66 Aligned_cols=326 Identities=11% Similarity=0.092 Sum_probs=184.8
Q ss_pred HHHHHhhhhhc-cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc-----CCchHHHHHHHHHHHHHHhhccchhHH--
Q 045863 193 IAVSELSRASA-EVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT-----RKPRTLLWVIGFVTFFLSSILDNLTST-- 264 (537)
Q Consensus 193 ~a~~~~~~~ls-~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~-----~~~~~l~~~l~l~~~~lS~fl~N~ta~-- 264 (537)
|+++.+++..+ ...+....++..+-++..|++.|-.+.+.+.+.| |+|..++...++++.+++-++++.+-.
T Consensus 60 D~f~~i~~~~~s~~~glGl~Im~~~GFa~YM~hIGA~~~lV~~~~kPL~~ik~pYlll~~~~llg~llsl~IpSAaGLa~ 139 (455)
T PRK09804 60 DIYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSATYVIGQIMAQFITSASGLGM 139 (455)
T ss_pred hHHHHHHHHHhhccccHHHHHHHHHhHHHHHHhhCccHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhccccHHhHHH
Confidence 56666665443 3348888899999999999999999999987754 578888888999999999999988766
Q ss_pred ---HHHHHHHHHhC-CChhHHHHHHHHHHHHHhhcc-ccccccchhhhhhHhcccCChHHHH-HHhhHHHHHHHHHHHHH
Q 045863 265 ---IVMVSLLRKLV-PPSEYRKLLGAVVVIAANAGG-AWTPIGDVTTTMLWIHGQISTLPTM-KSLFIPSAVSLAVPLAF 338 (537)
Q Consensus 265 ---~im~PI~~~l~-~p~~~~~~~l~~va~aan~Gg-~~TpiG~~~Nll~~~~~~isf~~~~-~~~~pp~lv~l~v~~~l 338 (537)
+.++|+..+++ +| .. +.+..+..+. ..+|. ++-|..+++..+++-.||+ .+-.|..+...++..+.
T Consensus 140 lLmatl~PvLi~~Gvs~-~~------AaaVia~t~~i~~gP~-s~~~v~aA~~~g~~v~~y~~~~q~p~~i~~i~~iai~ 211 (455)
T PRK09804 140 LLMVTLFPTLVSLGVSR-LS------AVAVIATTMSIEWGIL-ETNSIFAAQVAGMKIATYFFHYQLPVASCVIISVAIS 211 (455)
T ss_pred HHHHHHHHHHHHcCCCH-HH------HHHHHHhhhcccCCCC-CchHHHHHHHcCCChhheeeeccHHHHHHHHHHHHHH
Confidence 44579998884 43 11 2222222211 14444 4466678888889999988 56677665444322222
Q ss_pred HHhh-----ccccCCCcCCccccccccCCchhHHHHHH---HHHHHHHHHHHhhh-----cCCChHHHHHHHHHHHHHHh
Q 045863 339 LSLT-----SEVNGKGQESSNVLASEQMAPRGQLVFAV---GIGALIFVPVFKAL-----TGLPPYMGILLGLGVLWILT 405 (537)
Q Consensus 339 l~~~-----~~~~~~~~~~~~l~~~~~i~~~~~~~~~l---~l~~lill~i~~~~-----~gi~~~~valiga~lLll~~ 405 (537)
-|++ ||+++..++.. +.++.+.+.-.+.++ .=+.+++..-+.+. .+++...+.+++..+.+++.
T Consensus 212 h~fwqr~~Dkk~~~~~~~~~---~~~~~~~~~p~~YAlLP~lPliLil~~~f~~~~~~~~i~l~v~~am~is~~ia~l~e 288 (455)
T PRK09804 212 HFFVQRAFDKKDKNINHEQA---EQKALDNVPPLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVE 288 (455)
T ss_pred HHHHHHHHHhhccccccccc---ccccccccCchHHHHHHHHHHHHHHHHHhhcccccCceeecHHHHHHHHHHHHHHHH
Confidence 2221 22211111111 111111111111111 11111111102222 45677788888888777776
Q ss_pred hhccccchhhcc-CCHHHHhh---cC--ChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH---H-HHHHHHHH
Q 045863 406 DAIHYGESERQK-LKVPQALS---RI--DTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID---L-IASAIGVV 475 (537)
Q Consensus 406 ~vl~~~~~~~~~-i~~~~~l~---~v--~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~---~-i~~i~~~l 475 (537)
.+|++ +.++. .+.+.-++ +. +--+++.-++.| +.+|+..|++|.+-+...+.-.+.. . +..+.++.
T Consensus 289 -~ir~r-~~k~~~~~~~~ff~GMG~~f~~VV~LIVAA~vF--a~GL~aiG~Id~Li~~~~~~g~g~~~~~lv~~~i~~l~ 364 (455)
T PRK09804 289 -FFRKH-NLRETMDDVQAFFDGMGTQFANVVTLVVAGEIF--AKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAIC 364 (455)
T ss_pred -HHHhc-cchhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HhHHHHhhHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Confidence 33222 11110 01111111 11 122344444444 8999999999999998877542222 1 12223333
Q ss_pred HHhH-chHHHHHHHHhhhh----ccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCcc
Q 045863 476 SAVI-DNVPLVAATMGMYD----LTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVD 535 (537)
Q Consensus 476 S~~i-sNtp~va~llpv~~----~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~ 535 (537)
+-++ |..+...++.|... ..|.+ +....+.+.+++++|=++.|++ +.-+++.|.+|++
T Consensus 365 a~l~GSGnAaffAF~~lvp~iA~~~G~~-~~~l~lpmq~as~lgRt~SPVa-gviIavAg~a~vS 427 (455)
T PRK09804 365 AIVMGSGNAPFMSFASLIPNIAAGLHVP-AVVMIMPMHFATTLARAVSPIT-AVVVVTSGIAGVS 427 (455)
T ss_pred HhhhcCchHHHHHHHHHhHHHHHHcCCC-HHHHHHHHHHHHhhccccCchh-hHHhhhccccCCC
Confidence 3333 34444455555542 23433 3455667788999999999998 6667777777764
No 51
>PF02040 ArsB: Arsenical pump membrane protein; InterPro: IPR000802 Arsenic is a toxic metalloid whose trivalent and pentavalent ions inhibit a variety of biochemical processes. Operons that encode arsenic resistance have been found in multicopy plasmids from both Gram-positive and Gram-negative bacteria []. The resistance mechanism is encoded from a single operon, which houses an anion pump. The pump has two polypeptide components: a catalytic subunit (the ArsA protein), which functions as an oxyanion-stimulated ATPase; and an arsenite export component (the ArsB protein), which is associated with the inner membrane []. The ArsA and ArsB proteins are thought to form a membrane complex that functions as an anion-translocating ATPase. The ArsB protein is distinguished by its overall hydrophobic character, in keeping with its role as a membrane-associated channel. Sequence analysis reveals the presence of 13 putative transmembrane (TM) regions.; GO: 0015105 arsenite transmembrane transporter activity, 0016021 integral to membrane
Probab=99.08 E-value=1.2e-08 Score=109.60 Aligned_cols=173 Identities=22% Similarity=0.235 Sum_probs=123.8
Q ss_pred HHHHHHhhcccCcchHHHHHHHHHHHHHHHhcC-CCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHH
Q 045863 155 GYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIG-APSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTD 233 (537)
Q Consensus 155 ~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~-~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~ 233 (537)
..+++.....+|+|...++..+++++.+...-+ ..+.++..+...| +++.|..|+|+++++++++|+.+.++.
T Consensus 232 ll~~~~~~~~~~ip~~~va~~~a~ill~~~~r~~~~~~~~~l~~~pW------~il~F~~gLfvvV~~L~~~Gl~~~l~~ 305 (423)
T PF02040_consen 232 LLAGFFVASFLGIPVSAVAGAGAVILLALARRSRKISPKRVLREVPW------SILPFVLGLFVVVEGLENTGLTELLAR 305 (423)
T ss_pred HHHHHHhccccCCcHHHHHHHHHHHHHHHHHhcccccHHHHHHhCCc------hHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 334444444578998888888877776543211 1134455555555 999999999999999999999999999
Q ss_pred HHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhhH
Q 045863 234 NITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLW 310 (537)
Q Consensus 234 ~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~ 310 (537)
.+.. .+...-.+.+.++++++|.++||.++.++..+-.+....+...+.....+..+++|+|...||+|+-.|++=-
T Consensus 306 ~l~~~~~~~~~~a~~~~g~~~A~lsnl~NNLPa~Li~~~ai~~~~~~~~~~~~~~~A~lIG~nlGp~lTp~GSLATLLWl 385 (423)
T PF02040_consen 306 LLGTAASQGLLAAILGMGFLSAILSNLMNNLPAVLIGALAIQAAHAPGLVREALIYALLIGVNLGPNLTPIGSLATLLWL 385 (423)
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhhcccCCchhHHHHHHHHHHhcccCcccchHHhHHHHHHH
Confidence 8853 3444557788899999999999999988776655443222222223345788999999999999999996522
Q ss_pred h-----cccCChHHHHHHhhHHHHHHHH
Q 045863 311 I-----HGQISTLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 311 ~-----~~~isf~~~~~~~~pp~lv~l~ 333 (537)
. ..+++|.+|++.+.+.+...++
T Consensus 386 ~~L~~~Gi~is~~~f~k~G~vlt~p~Ll 413 (423)
T PF02040_consen 386 HILRRKGIKISWGEFLKLGLVLTPPVLL 413 (423)
T ss_pred HHHHHCCCCCCHHHHHHHhHHHHHHHHH
Confidence 2 3489999999987754443333
No 52
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=99.06 E-value=3.3e-07 Score=98.91 Aligned_cols=162 Identities=8% Similarity=0.048 Sum_probs=104.9
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTLL 244 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l~ 244 (537)
++....-++++...-+..-. ++++..+.+.++..+.- .+-+.+...-++++.++++|..+|+++.+.|+ ..++.-
T Consensus 22 lhpF~aLl~~al~~gl~~G~---~~~~i~~~i~~GfG~tl~~igivI~lG~~iG~~l~~SGaa~~IA~~l~~~~G~k~~~ 98 (441)
T PF02447_consen 22 LHPFLALLIVALIVGLLAGM---PPEEIVKSITKGFGSTLGSIGIVIALGAMIGKLLEESGAAERIANTLLKKFGEKRAP 98 (441)
T ss_pred hhHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCCccc
Confidence 67766666666655444422 77787777777665554 67777888889999999999999999998764 455667
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHhCCC--hhHHHHHHHHHHHHHhhccccccccchhhhh-hHhcccCChHHHH
Q 045863 245 WVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPP--SEYRKLLGAVVVIAANAGGAWTPIGDVTTTM-LWIHGQISTLPTM 321 (537)
Q Consensus 245 ~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p--~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll-~~~~~~isf~~~~ 321 (537)
+.+.+..++++-=+=.+++..++.|+++++.+. .++. .+.++++.+...+-.+.| -.|+.+ +.+..+.+....+
T Consensus 99 ~A~~i~g~iv~IPvF~dv~~viL~Pl~~~la~~~~~s~~-~~~~~l~~gl~~~h~lvP--PtPgpla~a~~lg~dlG~~i 175 (441)
T PF02447_consen 99 LALAITGFIVGIPVFFDVGFVILAPLAFSLARKTGKSLL-YLALPLAAGLSVTHALVP--PTPGPLAAAGALGADLGLVI 175 (441)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHHHHhhhccC--CCCcHHHHHHHhCCChhHHH
Confidence 777777777765555557789999999776211 1121 222333333333222222 123334 4455678888888
Q ss_pred HHhhHHHHHHHHH
Q 045863 322 KSLFIPSAVSLAV 334 (537)
Q Consensus 322 ~~~~pp~lv~l~v 334 (537)
.++.+.++...++
T Consensus 176 l~Gl~vaip~~~i 188 (441)
T PF02447_consen 176 LYGLIVAIPAMLI 188 (441)
T ss_pred HHhHHHHHHHHHH
Confidence 8888777766554
No 53
>PRK09821 putative transporter; Provisional
Probab=99.06 E-value=4.9e-07 Score=97.79 Aligned_cols=176 Identities=9% Similarity=-0.034 Sum_probs=113.5
Q ss_pred HHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHh
Q 045863 158 GIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNIT 236 (537)
Q Consensus 158 ~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~ 236 (537)
+++..+ ++.....++++....+..-. +.++..+.+.++..+.. +...+++..-+++..++++|..+++++.+.
T Consensus 20 li~k~k---l~pf~alii~al~~gl~~G~---~~~~i~~~i~~G~g~tl~~~~lii~lGa~~G~~le~SGaa~~Ia~~ii 93 (454)
T PRK09821 20 LVIKAK---VQPFVALLLVSLLVALAAGI---PAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFT 93 (454)
T ss_pred HHHHhC---ccHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 344444 78877777777766655433 56777777777766665 666777778889999999999999999987
Q ss_pred cC-CchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChh-HHHHHHHHHHHHHhhcc-ccccccchhhhhhHhcc
Q 045863 237 TR-KPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSE-YRKLLGAVVVIAANAGG-AWTPIGDVTTTMLWIHG 313 (537)
Q Consensus 237 ~~-~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~-~~~~~l~~va~aan~Gg-~~TpiG~~~Nll~~~~~ 313 (537)
|. ..++..+.+.+.+++++--.-=+++..++.|+++.+.+..+ ..+.+.++++.+.+... ..-|...|.|. .+..
T Consensus 94 ~~~G~k~~~~ai~i~~~ilgIpvF~dv~fvil~Pl~~~l~kk~~~~~~~l~l~~~~~l~~~h~~vPP~Pgp~~~--a~~L 171 (454)
T PRK09821 94 RKLGDKRTIAALTLAAFILGIPVFFDVGFIILAPIIYGFAKVAKVSPLKFGLPVAGIMLTVHVALPPHPGPVAA--AGLL 171 (454)
T ss_pred HHhCCCchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHcccccCCChHHHHH--HHHh
Confidence 63 45566777888888876322224666788999866621111 11123334432333322 34567778874 4666
Q ss_pred cCChHHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 314 QISTLPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 314 ~isf~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
+.+-.....++.+.++...++.+++..+
T Consensus 172 g~d~g~~~l~Giivaip~~i~g~~~~~~ 199 (454)
T PRK09821 172 HADIGWLTIIGIAISIPVGIVGYFAAKI 199 (454)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777767777777666655554444
No 54
>PRK14984 high-affinity gluconate transporter; Provisional
Probab=99.03 E-value=9.7e-07 Score=95.05 Aligned_cols=163 Identities=9% Similarity=0.089 Sum_probs=104.2
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTLL 244 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l~ 244 (537)
++.....++++....+..-. +.++..+.+.++..++- +.-.++...-+++..++++|..+++++.+.|+ ..++..
T Consensus 22 l~pf~alli~a~~~gl~~Gm---~~~~~~~~i~~G~g~~l~si~iii~lGai~G~~l~~SGaA~~IA~~ii~~~G~kr~~ 98 (438)
T PRK14984 22 MNGFIALVLVALAVGLMQGM---PLDKVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQ 98 (438)
T ss_pred HhHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHhCccchH
Confidence 78877777777776665533 67777776776666555 66677777788999999999999999998763 556778
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChh-HHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHH
Q 045863 245 WVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSE-YRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKS 323 (537)
Q Consensus 245 ~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~-~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~ 323 (537)
+.+.+.+++++-=+-=+++..++.|+++++.+..+ .++.+..++..+....-.+ .-++|--+-+.+..+.+....+.+
T Consensus 99 ~a~~l~~~il~ipvF~dv~fvil~Pi~~~lak~~~~~~~~~~~~l~~gl~~th~~-vPP~Pgpla~a~~lgadlG~~il~ 177 (438)
T PRK14984 99 WAVVLTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGF-LPPHPGPTAIATIFNADMGKTLLY 177 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHhC-CCCCCcHHHHHHHhCCCHHHHHHH
Confidence 88888777777323334555688999977621111 1111222222222222222 124443334556668888888888
Q ss_pred hhHHHHHHHH
Q 045863 324 LFIPSAVSLA 333 (537)
Q Consensus 324 ~~pp~lv~l~ 333 (537)
+.++++...+
T Consensus 178 Glivaip~~~ 187 (438)
T PRK14984 178 GTILAIPTVI 187 (438)
T ss_pred hHHHHHHHHH
Confidence 8877776643
No 55
>PRK10472 low affinity gluconate transporter; Provisional
Probab=99.01 E-value=1.1e-06 Score=94.91 Aligned_cols=163 Identities=6% Similarity=0.008 Sum_probs=107.7
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTLL 244 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l~ 244 (537)
++.....++++.++.++.-. +.++..+.+.+++.+.. .+...+....+++..++++|..+++++.+.|. ..+|..
T Consensus 26 l~~fialli~Alivgl~~Gm---p~~~~~~~i~~G~g~tlg~i~~iI~lGailG~lLe~SGaa~~IA~~i~~~fG~kr~~ 102 (445)
T PRK10472 26 MHAFVALMVVSMGAGLFSGM---PLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH 102 (445)
T ss_pred ccHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCcccHH
Confidence 88888888888887766533 56666655655554444 56667777788999999999999999999764 567788
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHhCCCh-hHHHHHHHHHHHHHhhccccccccchhhhh-hHhcccCChHHHHH
Q 045863 245 WVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPS-EYRKLLGAVVVIAANAGGAWTPIGDVTTTM-LWIHGQISTLPTMK 322 (537)
Q Consensus 245 ~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~-~~~~~~l~~va~aan~Gg~~TpiG~~~Nll-~~~~~~isf~~~~~ 322 (537)
+.+.+..++++-=+=-+.+..++.|+++++.+.. +....+..+++.+-..+-.+.| -.|+.+ +.+..+.+....+.
T Consensus 103 ~A~~l~g~iv~iPvF~dv~fvil~Pl~~~la~~~~~s~~~~~~~l~~gl~~~H~~vP--P~Pgp~a~a~~l~adlG~~il 180 (445)
T PRK10472 103 YAIGLAGLICALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLL--PGPAPMLLASQMNADFGWMIL 180 (445)
T ss_pred HHHHHHHHHHhhHHHHhhHHHHhHHHHHHHHHHHCCChHHHHHHHHHHHHhcccccC--CCcHHHHHHHHhCCCHHHHHH
Confidence 8888888877766667788889999987662111 1111123333333333333222 124444 44556888888887
Q ss_pred HhhHHHHHHHHH
Q 045863 323 SLFIPSAVSLAV 334 (537)
Q Consensus 323 ~~~pp~lv~l~v 334 (537)
++..+++...++
T Consensus 181 ~Glivaip~~~i 192 (445)
T PRK10472 181 IGLCAAIPGMII 192 (445)
T ss_pred HHHHHHHHHHHH
Confidence 787777766443
No 56
>PRK15060 L-dehydroascorbate transporter large permease subunit; Provisional
Probab=98.96 E-value=7.6e-06 Score=88.11 Aligned_cols=303 Identities=16% Similarity=0.130 Sum_probs=165.6
Q ss_pred HHHHHHHHHhChHHHHHHHH---hcCCchHHHHHHHHHHHHHHhhccchhHH-----HHHHHHHHHhCCChhHHHHHHHH
Q 045863 216 MTIVEIVDAHQGFKLVTDNI---TTRKPRTLLWVIGFVTFFLSSILDNLTST-----IVMVSLLRKLVPPSEYRKLLGAV 287 (537)
Q Consensus 216 ~ii~~~l~~tGl~~ria~~l---~~~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~im~PI~~~l~~p~~~~~~~l~~ 287 (537)
...++.++++|+.||+-+.. .++-+-++.....+.+.++++...+.++. .+++|-++|-+-++++ ..+
T Consensus 63 il~G~lm~~~Gi~~rl~~~~~~lvG~~rGGLa~v~v~as~~fgaiSGSs~A~~aaiG~i~iP~M~k~GY~~~~----aag 138 (425)
T PRK15060 63 VLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVAALLVPMMRSANYPVNR----AAG 138 (425)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHcCCCHHH----HHH
Confidence 45577889999999988754 45555577788888888888886544443 4567877776433333 223
Q ss_pred HHHHHhhccccccccchhhhhhHh-cccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCCccccccccCCchh
Q 045863 288 VVIAANAGGAWTPIGDVTTTMLWI-HGQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQESSNVLASEQMAPRG 365 (537)
Q Consensus 288 va~aan~Gg~~TpiG~~~Nll~~~-~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~~~l~~~~~i~~~~ 365 (537)
+.-++..-|...|= ..++++.. ..+.|..+-+..+..|+++..+....+.+++ |+.+-+.++..+.+| ..+.-+
T Consensus 139 ~~aasg~lG~lIPP--Si~mIiy~~~~~~Si~~LF~AGiiPGll~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~ 214 (425)
T PRK15060 139 LIASGGIIAPIIPP--SIPFIIFGVSSGLSISKLFMAGIAPGIMMGATLMLTWWWQASRLNLPRQPKATMRE--IWQSLV 214 (425)
T ss_pred HHHHhccCCccCCc--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCCCHHH--HHHHHH
Confidence 33232222333331 12223332 4589999999899999987665444444443 221110000000000 000000
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHH---hh---cCChHHHHHHHHHH
Q 045863 366 QLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQA---LS---RIDTQGALFFLGIL 439 (537)
Q Consensus 366 ~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~---l~---~v~W~tLl~f~glf 439 (537)
.....+.+-.+++..+.... ..|+-.+.+++...++++... + |+++|+|. ++ +..=.+++..++..
T Consensus 215 ~a~~~l~~pviilggI~~Gi--~TpTEAaava~~yal~v~~~i-y-----r~l~~~~l~~~l~~t~~~t~~i~~ii~~a~ 286 (425)
T PRK15060 215 SGIWALFLPVIIIGGFRSGL--FTPTEAGAVAAFYALFVAVVI-Y-----REMTFSTLYHVLINAAKTTSVVMFLVASAQ 286 (425)
T ss_pred HHHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHH-H-----cCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222222333222 245545555544434443111 1 23455443 22 22233445556666
Q ss_pred HHHHHHHHhcHHHHHHHHHHhhhhhhHH----HHHHHHHHHHhHchHHHHHHHHhhhh--ccCCCCChHHHHHHHHHH--
Q 045863 440 LSVSSLEAAGLLREIANYLDAHISNIDL----IASAIGVVSAVIDNVPLVAATMGMYD--LTSFPQDSKFWQLIAYCA-- 511 (537)
Q Consensus 440 ~l~~~L~~tG~~~~la~~l~~~i~~~~~----i~~i~~~lS~~isNtp~va~llpv~~--~~~~~~~~~~~laLa~~a-- 511 (537)
..+..+..+|+.+.+++.+.+...+.+. +.++..++..++|.++....+.|++. ..+.+.+ +.|..+.+..
T Consensus 287 ~f~~~lt~~gvp~~i~~~i~~~~~~~~~~Ll~i~~~~lvlGmfld~~a~ili~~Pil~Pi~~~~Gid-pv~fgii~~~~~ 365 (425)
T PRK15060 287 VSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAIMVVGMVMDLTPTVLILTPVLMPLVKEAGID-PIYFGVMFIINC 365 (425)
T ss_pred HHHHHHHHcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHcCCC-hHHHHHHHHHHH
Confidence 6788899999999999999988765553 24455788899999999998888872 2334433 4455554444
Q ss_pred HHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 512 GTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 512 ~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
.+|..-.|+| ..=.+..+.+|.++
T Consensus 366 ~ig~iTPPvG-~~lfv~~~ia~~~~ 389 (425)
T PRK15060 366 SIGLITPPVG-NVLNVISGVAKLKF 389 (425)
T ss_pred HHhCCCCCcc-HHHHHHHHhcCCCH
Confidence 4665555666 55556666666553
No 57
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=98.95 E-value=1.3e-06 Score=95.40 Aligned_cols=321 Identities=14% Similarity=0.150 Sum_probs=158.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc---CCchHHH-HH-HHHHHHHHHhhccchhHH--HHHHHHHHHhC-
Q 045863 204 EVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT---RKPRTLL-WV-IGFVTFFLSSILDNLTST--IVMVSLLRKLV- 275 (537)
Q Consensus 204 ~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~---~~~~~l~-~~-l~l~~~~lS~fl~N~ta~--~im~PI~~~l~- 275 (537)
+..+++++++...-..+.++++|..+.....+.| ++...++ .. +.+.....+..+++.+.. .+++|++.+++
T Consensus 76 ~~a~ii~~I~~igG~~~vm~~tGA~~~~v~~l~k~l~~~~~~~I~i~~~~f~~~~~~~g~~~~~i~~~~il~pi~~alG~ 155 (465)
T PF03606_consen 76 QAAGIIFFIMIIGGFFGVMNHTGAIDALVNLLIKPLKGKKNPLIPILMFFFSGGGLTIGIPEEAIAFMPILIPILIALGY 155 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC
Confidence 3448888888888999999999999999988865 2222222 22 223333444555655533 56788888884
Q ss_pred CChhHHHHHHHHHHHHHhhccccccccchhhhhhH-hcccCChHHHHHHhhHHHHHHHHHHHHHH-HhhccccCCC----
Q 045863 276 PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLW-IHGQISTLPTMKSLFIPSAVSLAVPLAFL-SLTSEVNGKG---- 349 (537)
Q Consensus 276 ~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~-~~~~isf~~~~~~~~pp~lv~l~v~~~ll-~~~~~~~~~~---- 349 (537)
++ .. ..++.+.+...|..++..||-|..++ +..+++..+++..-..+..+..++...+. ++.+|.++++
T Consensus 156 d~-~~----a~a~v~~~~~~g~~~~~~npf~~~iAq~iaglp~~sg~~~r~i~~~i~~~i~~~~~~~ya~kv~~~p~~~~ 230 (465)
T PF03606_consen 156 DP-IT----AAAAVILGAGAGFAGPPSNPFTVGIAQKIAGLPLFSGFWFRQIPFVIFTLIAIAYVHRYAQKVKKDPSYSE 230 (465)
T ss_pred CH-HH----HHHHHHHHHHHhhcCCccChHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence 43 22 23455555556778888888776554 45689988877665555554444333333 2222221111
Q ss_pred --cCCc--cc--c-ccccCCchhHHHHHHHHHHHHHHHH-H-hhhcC--CChHHHHHHHHHHHHHHhhhccccchhhccC
Q 045863 350 --QESS--NV--L-ASEQMAPRGQLVFAVGIGALIFVPV-F-KALTG--LPPYMGILLGLGVLWILTDAIHYGESERQKL 418 (537)
Q Consensus 350 --~~~~--~l--~-~~~~i~~~~~~~~~l~l~~lill~i-~-~~~~g--i~~~~valiga~lLll~~~vl~~~~~~~~~i 418 (537)
+..+ +. + ++++++.+++....+.++.+++... + ....+ ......+.+...+-++.+ .++++ +..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~li~g~~~~~~~~~~~~~~~~~~fl~~~ii~~-~i~~~----~~~ 305 (465)
T PF03606_consen 231 VYEDDEAEEEEEEEQEEKLTKRPKLYLLLPVLPFVLLIYGFSFVIIKIKWYFPEIAALFLIIGIIIG-LIRHR----SGK 305 (465)
T ss_pred hhhhHHhhhhcccccccccccccceeehHHHHHHHHHHhchhhhhccccccHHHHHHHHHHHHHHHH-HHHhh----ccC
Confidence 1100 00 1 1112334454444443333322111 1 11111 222222222222222333 22110 112
Q ss_pred CHHHHhhcC--ChHHH---HHHHHHHHHHHH-HHHhcHHHHHHHHHHhhh---hhhH---HHHHHHHHHHHhH-chHHHH
Q 045863 419 KVPQALSRI--DTQGA---LFFLGILLSVSS-LEAAGLLREIANYLDAHI---SNID---LIASAIGVVSAVI-DNVPLV 485 (537)
Q Consensus 419 ~~~~~l~~v--~W~tL---l~f~glf~l~~~-L~~tG~~~~la~~l~~~i---~~~~---~i~~i~~~lS~~i-sNtp~v 485 (537)
+.+|..++. .-+-+ .+..|+..-+.. +++....+.+-+.+.... ++.. .++++..+++-++ |..+.+
T Consensus 306 ~~~~~~~~F~~G~~~~~~~a~vVgla~ai~v~~~~~~i~~tI~~~~~~~l~~~~~~~~~~~m~~~~~~~~fli~SGsg~a 385 (465)
T PF03606_consen 306 SPNEIVKAFFKGMGDMLSFALVVGLARAISVFMEGGKIIDTIVHLLSNLLSGLPGVIAAIGMFLIQFLINFLIGSGSGQA 385 (465)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHeeecCCchHHH
Confidence 223322210 01111 111222211121 444444555555554443 2211 1222333333333 456777
Q ss_pred HHHHhhhh----ccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 486 AATMGMYD----LTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 486 a~llpv~~----~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
++++|+.. ..|.+ .....++.-++.+++-.++|.+ +.-+...|.+|+++
T Consensus 386 ~~~mpim~plad~~Gi~-~q~~vla~q~g~gl~n~isPts-g~~m~~l~ia~V~~ 438 (465)
T PF03606_consen 386 AAFMPIMPPLADLLGIT-RQTAVLAFQFGDGLGNSISPTS-GVLMAVLGIAKVSY 438 (465)
T ss_pred HHHHHhHHHHHHHcCCC-HHHHHHHHHHHHHHHhhccchH-HHHHHHhhhcCCCH
Confidence 77788873 23444 3456667778899988889987 55666778888775
No 58
>PF06808 DctM: DctM-like transporters; InterPro: IPR010656 This domain represents a conserved region located towards the N terminus of the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers [, ]. Note that many family members are hypothetical proteins.
Probab=98.88 E-value=3.2e-06 Score=91.15 Aligned_cols=303 Identities=13% Similarity=0.121 Sum_probs=164.2
Q ss_pred HHHHHHHHHhChHHHHHHHH---hcCCchHHHHHHHHHHHHHHhhccchhHH-----HHHHHHHHHhCCChhHHHHHHHH
Q 045863 216 MTIVEIVDAHQGFKLVTDNI---TTRKPRTLLWVIGFVTFFLSSILDNLTST-----IVMVSLLRKLVPPSEYRKLLGAV 287 (537)
Q Consensus 216 ~ii~~~l~~tGl~~ria~~l---~~~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~im~PI~~~l~~p~~~~~~~l~~ 287 (537)
+..++.++++|+.||+-+.. .++.+-++.....+.++++++...+.++. .+++|.++|.+-++++ ..+
T Consensus 62 il~G~ll~~~gi~~~l~~~~~~~~g~~~Ggla~~~v~as~~fgaisGS~~A~~a~~G~i~iP~M~k~GY~~~~----A~a 137 (416)
T PF06808_consen 62 ILMGELLERSGIADRLIDFANALVGRVRGGLAQVAVVASALFGAISGSSVANAAAIGSITIPEMKKAGYPPEF----AAA 137 (416)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhCCCCccchhHHHHHHHHHHHhccchHhHHHHHHHHHHHHHHHcCCCHHH----hHH
Confidence 45678889999999998754 45555567777777888888887544443 4556778776433333 222
Q ss_pred HHHHHhhccccccccchhhhhh-Hh-cccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCCccccccccCCch
Q 045863 288 VVIAANAGGAWTPIGDVTTTML-WI-HGQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQESSNVLASEQMAPR 364 (537)
Q Consensus 288 va~aan~Gg~~TpiG~~~Nll~-~~-~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~~~l~~~~~i~~~ 364 (537)
+.-++...|...|=.. .+++ .. ..+.|..+-+.....|+++..+...++.+++ ||.+.+.++..+.++..+.-++
T Consensus 138 v~aasgtlG~liPPsi--~~ii~~~a~~~~si~~lf~agiiPgll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (416)
T PF06808_consen 138 VIAASGTLGQLIPPSI--GMIIYGMAVTGVSIGDLFIAGIIPGLLLALGLMIYVYFIARKPGLPPEPRASLKERWRAFKR 215 (416)
T ss_pred HHhhccccchhcchHH--HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHhHhheeeccccCccccchHHHHHHHHHh
Confidence 2222222334433111 1122 22 4588999988888888887655444334442 2211111111111111111111
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh------cCChHHHHHHHHH
Q 045863 365 GQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS------RIDTQGALFFLGI 438 (537)
Q Consensus 365 ~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~------~v~W~tLl~f~gl 438 (537)
. +..+.+..+++..+.... ..++-.+..++...++.+... + |+++|||..+ +..=...+.+++.
T Consensus 216 ~--~~~l~~p~iil~~i~~g~--~t~teaa~~~~~~~l~i~~~~-~-----~~~~~~~l~~~l~~~~~~~~~i~~iia~a 285 (416)
T PF06808_consen 216 A--IPALLIPVIILGGIYLGI--FTPTEAAAVAVVYALVIGLFV-Y-----RRLSWKDLWRALVETARTTGMILFIIAAA 285 (416)
T ss_pred c--chHHHHHHHHHHHhhhcc--cchhhhhhhhHHHHHHHHHhh-h-----cccChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 1 111122222222232221 234444444444434443211 1 2345554332 2233355666677
Q ss_pred HHHHHHHHHhcHHHHHHHHHHhhhhhhHHH----HHHHHHHHHhHchHHHHHHHHhhhh--ccCCCCC-hHHHHHHHHHH
Q 045863 439 LLSVSSLEAAGLLREIANYLDAHISNIDLI----ASAIGVVSAVIDNVPLVAATMGMYD--LTSFPQD-SKFWQLIAYCA 511 (537)
Q Consensus 439 f~l~~~L~~tG~~~~la~~l~~~i~~~~~i----~~i~~~lS~~isNtp~va~llpv~~--~~~~~~~-~~~~laLa~~a 511 (537)
-.++..+..+|+.+.+++.+.+..++++.+ .++..++..++|.++......|++. ..+.+.+ ..+...+.+..
T Consensus 286 ~~~~~~l~~~g~~~~i~~~i~~l~~~~~~~l~l~~l~~lilG~~m~~~a~~ii~~pi~~P~~~~~Gidpi~~g~~~~~~~ 365 (416)
T PF06808_consen 286 GIFSWVLTLTGVPQAIAEFILSLSGSPWLVLLLIMLILLILGMFMDTTAAIIIVAPILAPIAQALGIDPIHFGVFMFYNA 365 (416)
T ss_pred HHHHHHHHHcCccHHHHHHHHhcCcchHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 777888999999999999999887666532 3445777788999999988888763 2233332 33444455666
Q ss_pred HHhhhhhHHhHHHHHHHHhhcCcc
Q 045863 512 GTGGSMLIIGSAAGVAFMGMEKVD 535 (537)
Q Consensus 512 ~iGg~lTpiGS~an~i~~g~~~~~ 535 (537)
.+|..--|+| .+-.+..+.+|.+
T Consensus 366 ~ig~iTPPvg-l~lfva~~ia~~~ 388 (416)
T PF06808_consen 366 EIGLITPPVG-LNLFVAAGIAGVP 388 (416)
T ss_pred HhcCCCCCcc-HHHHHHHHHhCCC
Confidence 6665333555 5556666666544
No 59
>TIGR00931 antiport_nhaC Na+/H+ antiporter NhaC. A single member of the NhaC family, a protein from Bacillus firmus, has been functionally characterized.It is involved in pH homeostasis and sodium extrusion. Members of the NhaC family are found in both Gram-negative bacteria and Gram-positive bacteria.
Probab=98.80 E-value=5e-05 Score=82.80 Aligned_cols=146 Identities=11% Similarity=0.032 Sum_probs=100.1
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc-CCchHHHHHHHHHHHHHHhhcc-chhHHHH-
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT-RKPRTLLWVIGFVTFFLSSILD-NLTSTIV- 266 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~-~~~~~l~~~l~l~~~~lS~fl~-N~ta~~i- 266 (537)
+.+|..+.+-++.++..+.++.++-.=.+...+..+|..+-+.++-.+ -++..+....++++.++|..+. +.++.+.
T Consensus 51 ~~~~~~~~~~~g~~~~~~~i~il~~~G~~~~~~~~~g~i~~l~~~g~~~i~p~~~~~~~Fl~~~~~s~~~Gss~gt~~~~ 130 (454)
T TIGR00931 51 GYNDLESAIIDGIKIGIKAILILALVGILIGTWIMGGTVPTLIYYGLSIISPEWFAVSTLLICMIVSSFTGTSWGTVGTI 130 (454)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 555655544444444445555555556677889999999888766544 4788888999999999999985 5545444
Q ss_pred ---HHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 267 ---MVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 267 ---m~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
++|+..++.-|... ..-++.-++-.|--+.|+++.+| +.....+.+..|.++.+.|..+...++..+..
T Consensus 131 g~~l~~i~~~~g~~~~~---~agai~sGa~fGD~~sP~Sdtt~-l~a~~~~~~~~~~v~~~~~~~~~a~~i~~v~~ 202 (454)
T TIGR00931 131 GVAMMGIGTGLGIDLAI---AAGAVVCGAYFGDKLSPLSDTTN-FASGIVGVDLFDHIRHLLYTTVPSFVITAILF 202 (454)
T ss_pred HHHHHHHHHHcCCCHHH---HHHHHHHHHHHcCCCCCCCcHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666433222 12234445555778899999999 66667789999999999988887776555433
No 60
>TIGR00529 AF0261 converved hypothetical integral membrane protein. This protein is predicted to have 10 transmembrane regions. Members of this family are found so far in the Archaea (Archaeoglobus fulgidus and Pyrococcus horikoshii) and in a bacterial thermophile, Thermotoga maritima. In Pyrococcus, the gene is located between nadA and nadB, two components of an enzyme involved in de novo synthesis of NAD. By PSI-BLAST, this family shows similarity (but not necessarily homology) to gluconate permease and other transport proteins.
Probab=98.80 E-value=3.1e-05 Score=82.73 Aligned_cols=276 Identities=11% Similarity=0.058 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHh-Ch
Q 045863 149 ALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAH-QG 227 (537)
Q Consensus 149 l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~t-Gl 227 (537)
+.+|+..++++...+ ++.....+.++.++.+..-+ ++++..+.+.+ .....+.+.++++...+...++|+ |-
T Consensus 6 ~~~~~~ii~li~~~K---~~~~~all~~al~lgl~~G~---~~~~i~~~i~~-~g~~~~~i~lii~lg~l~g~l~~ssG~ 78 (387)
T TIGR00529 6 LSLFTVIVVLIVFKK---VNIGLLIFVGVMILALLVRL---GLEGFLWTLSL-ADSFWSLIVTIFIIAFLSGMMEKSFGD 78 (387)
T ss_pred HHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhCC---CHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHcCCH
Confidence 445554444444446 88888888888777665533 67777666655 333346677777777777799999 99
Q ss_pred HHHHHHHHhcC-CchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHhhccccccccc
Q 045863 228 FKLVTDNITTR-KPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLV---PPSEYRKLLGAVVVIAANAGGAWTPIGD 303 (537)
Q Consensus 228 ~~ria~~l~~~-~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~---~p~~~~~~~l~~va~aan~Gg~~TpiG~ 303 (537)
.+|+++.+.+. ..++..+...++.. + +-.....++.|+++++. +-++.. +.....++-...=...|--
T Consensus 79 ~~~ia~~l~~l~g~~~~~~ap~liG~-l----Pv~~g~vilaPlv~~la~~~~~s~~~--~~~~~~~~~~v~h~~~Pp~- 150 (387)
T TIGR00529 79 LSKFSEGMRTIFSKNSDSFVPALIGL-M----PMPGGALFSAPMVKNSLKEERINPEK--LTVKNYWFRHTWEFFWPIY- 150 (387)
T ss_pred HHHHHHHHHHHhCcccHHHHHHHHHH-h----hHHHHHHHHHHHHHHHHHHhCcCHHH--HHHHHHHHHHHHHhhcCCC-
Confidence 99999988653 33444444444333 2 33455667889987661 111111 1223333333333344542
Q ss_pred hhhh-hhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCcCCccccccccCCchhHHHHHHHHHHHHHHHHH
Q 045863 304 VTTT-MLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSLTSEVNGKGQESSNVLASEQMAPRGQLVFAVGIGALIFVPVF 382 (537)
Q Consensus 304 ~~Nl-l~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~~lill~i~ 382 (537)
|++ .+.+..+.+..+...+++|.++...+..+++.. ++.+++. . +++++... ....+=++.+++.-+.
T Consensus 151 -Pgpi~aa~~l~~~lg~~il~gl~i~i~~~i~G~~~~~--~~~~~~~--~---~~~~~~~~---~~~l~PI~lil~~s~~ 219 (387)
T TIGR00529 151 -PAVVLVSALSGIHPGKVSLTLFPVFAIAFFLGWFFFN--GKQLPCL--S---KPRNLFDS---FFNLYPIIIVLGTSVL 219 (387)
T ss_pred -chHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHc--Ccccccc--c---cccccCcc---cHHHHHHHHHHHHHHH
Confidence 333 344556889889998999888887666554222 2211110 0 01111110 1111001111011111
Q ss_pred hhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh-cCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhh
Q 045863 383 KALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS-RIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAH 461 (537)
Q Consensus 383 ~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~-~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~ 461 (537)
. . .++.. +++...+.+... . ..+ + .+.++..+ ..+|..++..++.....+.++++|+.|.+++.+.+.
T Consensus 220 ~-~--~~~~~-al~a~~l~~~~~-~--~~~---~-~~~~~~~~~al~~~illii~agg~fk~vL~~sGi~~~l~~~~~~~ 288 (387)
T TIGR00529 220 I-L--LDKLS-GWFALLLSTSIY-N--VFR---R-RYLLETLKRVFNKWIFLLLFAVMIYKVVIEHSGVGESIAAEFVSW 288 (387)
T ss_pred H-h--cChHH-HHHHHHHHHHHH-H--hcc---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhC
Confidence 1 1 23322 222222111111 0 101 0 12233333 567778889999999999999999999999998764
No 61
>PRK10034 fructuronate transporter; Provisional
Probab=98.79 E-value=1.5e-05 Score=86.29 Aligned_cols=159 Identities=11% Similarity=0.052 Sum_probs=100.9
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTLL 244 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l~ 244 (537)
++.....++++.++.++.-. +.++..+.+.+++.+.. +....+....++++.++++|-.+++++.+.|. ..++..
T Consensus 25 ~~~fialli~al~~gl~~Gm---~~~~~~~~i~~G~g~~~~si~lii~lGailG~lLe~SGaa~~Ia~~i~~~~G~kr~~ 101 (447)
T PRK10034 25 INSMVALLVAALSVGMLAGM---DLMKLLHTMKAGFGNTLGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQ 101 (447)
T ss_pred ccHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhCccchH
Confidence 88888888888877766533 56666666666555554 67777777788999999999999999998764 456677
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHhCC-C-hhHHHHHHHHHHHHHhhccccccccchhhhh-hHhcccCChHHHH
Q 045863 245 WVIGFVTFFLSSILDNLTSTIVMVSLLRKLVP-P-SEYRKLLGAVVVIAANAGGAWTPIGDVTTTM-LWIHGQISTLPTM 321 (537)
Q Consensus 245 ~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~-p-~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll-~~~~~~isf~~~~ 321 (537)
+.+++.+++++--+=-+++..++.|+++++.+ . .+.. .+.++++.+...+-.+-| -.|+.+ +.+..+.+..+.+
T Consensus 102 ~a~~l~g~llGi~vF~dv~~v~laPi~~~lak~~~~s~~-~~~~~l~~gl~~~h~lvP--P~Pgpla~a~~l~a~lG~~i 178 (447)
T PRK10034 102 LSVIIIGLIFGLAMFYEVAFIMLAPLVIVIAAEAKIPFL-KLAIPAVAAATTAHSLFP--PQPGPVALVNAYGADMGMVY 178 (447)
T ss_pred HHHHHHHHHHhhHHHHHhHHHhhHHHHHHHHHHhCcCHH-HHHHHHHHHHHHhhcccC--CCCcHHHHHHHhCCcHHHHH
Confidence 77776666653322234555778999987621 1 1111 123344444444333322 123334 4445677877877
Q ss_pred HHhhHHHHHH
Q 045863 322 KSLFIPSAVS 331 (537)
Q Consensus 322 ~~~~pp~lv~ 331 (537)
.++.+.++..
T Consensus 179 l~Gl~v~ip~ 188 (447)
T PRK10034 179 IYGVLVTIPS 188 (447)
T ss_pred HHhhHHHHHH
Confidence 7776555544
No 62
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=98.79 E-value=4.1e-06 Score=87.10 Aligned_cols=139 Identities=14% Similarity=0.305 Sum_probs=104.6
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHH---HHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCCh
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLV---TDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPS 278 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ri---a~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~ 278 (537)
+.++.++....-+..++.+|-.|++ |.++.|+||+++.+.-=+++.+++.+...--++.-++|++... ++|+
T Consensus 45 dVilII~aVi~a~a~lQaaGGlDylV~~Aek~LRk~Pk~It~lAP~vt~~~T~~~GTgh~a~s~lPVI~eVA~~~~IRPe 124 (364)
T PF03605_consen 45 DVILIIMAVITAAAALQAAGGLDYLVQIAEKILRKNPKYITFLAPLVTYLFTFLAGTGHVAYSLLPVIAEVAKENGIRPE 124 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHhCCCcEEEehhHHHHHHHHHhcccHHHHHhhHHHHHHHHHcCCCCC
Confidence 8888999999999999999999875 5678899999998777778888888876666667778987433 5666
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHh--c-ccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCC
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI--H-GQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKG 349 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~--~-~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~ 349 (537)
+. +.....+++.+-...|+...+-.++.. . .++++.|.+....|-+++..++..++.+++ +++++++
T Consensus 125 RP----ls~svvASq~aItaSPiSAA~~~~~~~l~~~~gv~~~~iL~V~iPat~ig~~~~a~~~~~~GkeL~~Dp 195 (364)
T PF03605_consen 125 RP----LSISVVASQIAITASPISAATVAMIAILAPAHGVSLLQILAVTIPATLIGVLVAAFVSSRRGKELDDDP 195 (364)
T ss_pred Cc----hHHHHHHHhcchhcCcHHHHHHHHHHHHccccCCCHHHHHHhhHHHHHHHHHHHHHHHHhcCCccccCH
Confidence 54 235667888888889998877766543 4 689999999888888888777665555554 4454443
No 63
>TIGR00784 citMHS citrate transporter, CitMHS family. This family includes two characterized citrate/proton symporters from Bacillus subtilis. CitM transports citrate complexed to Mg2+, while the CitH apparently transports citrate without Mg2+. The family also includes uncharacterized transporters, including a third paralog in Bacillus subtilis.
Probab=98.78 E-value=7.4e-07 Score=96.53 Aligned_cols=167 Identities=10% Similarity=0.071 Sum_probs=112.8
Q ss_pred HHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc
Q 045863 158 GIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT 237 (537)
Q Consensus 158 ~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~ 237 (537)
+.+... ++...+++++.++.+++.-. +.++..+.+.....+.-++..+++++-++..+++++|..|.+++.+.+
T Consensus 244 ~~~~~~---~~~~~~~li~~~iall~~~~---~~~~~~~~i~~~~~~~v~~~~Li~~aglf~~~l~~~G~i~~la~~l~~ 317 (431)
T TIGR00784 244 FLVLGT---KHLSVLFLIAFVLALTVNYP---NVKMQKERIAAHSGNALTVVSMVFAAGVFTGILSGTKMVDAMAGSLVS 317 (431)
T ss_pred HHHhcc---cCHHHHHHHHHHHHHHhcCC---CHHHHHHHHHhccccHhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 344455 67777777777666665432 344444434311111113445666666669999999999999998864
Q ss_pred C---Cch-HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh----C-CChhHHHHHHHHHHHHHhhccccccccchhhhh
Q 045863 238 R---KPR-TLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL----V-PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTM 308 (537)
Q Consensus 238 ~---~~~-~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l----~-~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll 308 (537)
- +.. .+...+.+++.++|.++||+++...+.|++.++ + +|.. ...+..++.+. ...+|+ +|+|.+
T Consensus 318 ~~~~~~~~~~~~i~~~~s~~~s~~~sn~a~~~~l~Piv~~ia~~~G~~~~~----l~~a~~i~~~~-~~~SPv-s~~~~l 391 (431)
T TIGR00784 318 IIPSSMGGFFPVIVALTSIPFTFVMSNDAYYFGVLPIFAEAASAYGIDPVE----IARASIMGQPV-HLLSPL-VPSTVL 391 (431)
T ss_pred HcCcchHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCHHH----HHHHHHhcccc-hhcCCc-hHHHHH
Confidence 2 222 477888899999999999999999999998765 1 2221 12233333332 348999 899999
Q ss_pred hHhcccCChHHHHHHhhHHHHHHHHHHH
Q 045863 309 LWIHGQISTLPTMKSLFIPSAVSLAVPL 336 (537)
Q Consensus 309 ~~~~~~isf~~~~~~~~pp~lv~l~v~~ 336 (537)
+.+..+++..|+.|..++..+...++..
T Consensus 392 ~~~~~~~~~~d~~k~~~~~~~~~~~v~~ 419 (431)
T TIGR00784 392 LVGMLGVSLGDHQKFAVKWAVITSIVMT 419 (431)
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9998899999999998887776555433
No 64
>PRK09921 permease DsdX; Provisional
Probab=98.77 E-value=2.6e-05 Score=84.74 Aligned_cols=163 Identities=7% Similarity=-0.047 Sum_probs=94.4
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLW 245 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~ 245 (537)
++....-+++++.+.+..-. ++++..+.+.+++.+.. .+...+....+++..++++|..+++++.+.+.+.++.-+
T Consensus 27 ~~~f~aLl~~ai~~gl~~g~---~~~~~~~~i~~g~g~t~g~i~~ii~lGai~G~lle~SGaa~~ia~~i~~~~~~~~~~ 103 (445)
T PRK09921 27 FHPFLALLLASFFVGAMMGM---GPLEMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADV 103 (445)
T ss_pred HhHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHhhhhHHH
Confidence 77777777677776655433 66777776766665554 666677888899999999999999999984322233333
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHhCC--ChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHH
Q 045863 246 VIGFVTFFLSSILDNLTSTIVMVSLLRKLVP--PSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKS 323 (537)
Q Consensus 246 ~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~--p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~ 323 (537)
...++..+.+-=.--+....++.|+++++.+ ..++.++ .+..+.+....-.+. =++|.-+.+.+..+.+-.....+
T Consensus 104 a~~~~gll~~IpvF~~~~~vil~Pl~~~lak~~~~s~~~~-~~~~~~~~~~~h~~v-Pp~Pg~~~~a~~lg~~lg~~~l~ 181 (445)
T PRK09921 104 IMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKL-AIPLCTALMAVHCVV-PPHPAALFVANKLGADIGSVIVY 181 (445)
T ss_pred HHHHHHHHHcccHHHHhHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHhHhcC-CCCcHHHHHHHHhCCCHHHHHHH
Confidence 3333333322111233344588899877621 1111111 122222222211222 34454444566678888888888
Q ss_pred hhHHHHHHHHH
Q 045863 324 LFIPSAVSLAV 334 (537)
Q Consensus 324 ~~pp~lv~l~v 334 (537)
+++.++...++
T Consensus 182 Gl~~~i~~~~i 192 (445)
T PRK09921 182 GLLVGLMASLV 192 (445)
T ss_pred HHHHHHHHHHH
Confidence 88888665443
No 65
>TIGR00786 dctM TRAP transporter, DctM subunit. force-dependent uptake of dicarboxylates into R. capsulatus.
Probab=98.76 E-value=1.3e-06 Score=93.74 Aligned_cols=182 Identities=16% Similarity=0.203 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHH-hc-CCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHH
Q 045863 146 LAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVR-SI-GAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVD 223 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~g-vi-~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~ 223 (537)
+..+.+.+..+..+..+. .+....+..++...++.+ .. ...+.++..+.++++.+.....++++.++..++..++
T Consensus 201 ~~~l~l~~~vi~~~~~g~---~~~~~a~~~~~~~alli~~~~~~~~~~~~~~~~l~~~~~~~~~i~lii~aa~~~~~vL~ 277 (405)
T TIGR00786 201 IWALLLPVLIIGGIFSGI---FTPTEAAAVAAVYALALSTFVYRELTLKSLCDVLLESLRTTSMVMLIIAGATVFSWLLT 277 (405)
T ss_pred HHHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666665 555554444444333333 11 1126677777777655555588888889999999999
Q ss_pred HhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhcc
Q 045863 224 AHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGG 296 (537)
Q Consensus 224 ~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg 296 (537)
++|+.+.+++.+.+ .++..+.+.+.++..++..+++|+++..++.|++..+ .+|.. +.+.+.+++.+ |
T Consensus 278 ~tG~~~~ia~~l~~~~~~~~~~~~li~~~~~ilg~~~~~~a~~~i~~PI~~p~a~~~Gv~p~~----~~~~~~~~~~~-g 352 (405)
T TIGR00786 278 HAQIPQRLADLLANAISSPIVFLIMINILLLIVGMFMDLTPAILILTPILLPVAVHLGIDPVH----FGVMFVLNLEI-G 352 (405)
T ss_pred HcChHHHHHHHHHhCCccHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHcCCChHH----HHHHHHHHHHH-h
Confidence 99999999999865 3566667778888999999999999998888887443 34433 23456666666 5
Q ss_pred cccc-ccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHH
Q 045863 297 AWTP-IGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPL 336 (537)
Q Consensus 297 ~~Tp-iG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~ 336 (537)
.+|| +|.+.+ ++.+..++++.||.|...|..++.+++..
T Consensus 353 ~ltPPvg~~~~-~~~~~~~~~~~~~~k~~~p~~~~~~~~~~ 392 (405)
T TIGR00786 353 LLTPPVGTNLF-VASGVAKMSITEVTRALWPFLLAQFLVLL 392 (405)
T ss_pred cCCCCchHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6776 995444 44567799999999998888776555444
No 66
>PF04165 DUF401: Protein of unknown function (DUF401) ; InterPro: IPR007294 Members of this family are predicted to have 10 transmembrane regions.
Probab=98.73 E-value=5.3e-05 Score=80.65 Aligned_cols=321 Identities=15% Similarity=0.234 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHh-Ch
Q 045863 149 ALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAH-QG 227 (537)
Q Consensus 149 l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~t-Gl 227 (537)
+++|.+.+++...++ ++.+...+.|++++...... ..+.....+.. ...++++-.++...++.+.++|+ |.
T Consensus 5 ~~~f~iii~~~~~rk---i~i~~s~~~ga~~l~~~~~~---~~~~~~~~~~~--~~~~~~i~~il~i~~i~~~~~~~~g~ 76 (385)
T PF04165_consen 5 LIVFLIIIVLLLLRK---INIGISILLGALILGLLFGL---GLDAFLKALAS--SSSWDTIVLILLIYFIMGLMEKLSGQ 76 (385)
T ss_pred HHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHhcc---cHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455555555555666 89999888888777665422 45554443331 12336666666666677777777 99
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHH-HHhhccccccc
Q 045863 228 FKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVI-AANAGGAWTPI 301 (537)
Q Consensus 228 ~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~-aan~Gg~~Tpi 301 (537)
.|++.+.+.+--+ |..... +=+ +=..+|.-.-+..-.|++++. .++++. .+ +.| -=.+.=...|+
T Consensus 77 l~~~~~~l~~l~~-R~~~~~--~PA-lIGLLPmpGGA~fSAPmV~~~~~~~~ls~e~k--t~---iNywFRHiwE~~~Pl 147 (385)
T PF04165_consen 77 LDRMVESLKGLFP-RVSLAF--IPA-LIGLLPMPGGALFSAPMVEEAAEKMGLSPEEK--TF---INYWFRHIWEFFWPL 147 (385)
T ss_pred HHHHHHHHHHHHH-HHHHHH--HHH-HHhcccCCCcceeehHHHHhhhhhccCCHHHH--HH---HHHHHHHHHHHHhhh
Confidence 9999987754211 222211 111 112345555555666777655 233321 11 111 11111122343
Q ss_pred cchhhhhh-HhcccCChHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCcCCccccccccCCchhHHHHHH--HHHHHHH
Q 045863 302 GDVTTTML-WIHGQISTLPTMKSLFIPSAVSLAVPLAFLSLTSEVNGKGQESSNVLASEQMAPRGQLVFAV--GIGALIF 378 (537)
Q Consensus 302 G~~~Nll~-~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l--~l~~lil 378 (537)
= |++++ .+-.+++..++...++|..+++++..|+ .+ .|+.+++.+..+ +. ++ ..... .+..+ +
T Consensus 148 Y--pgiiLas~l~gi~~~~~v~~~~P~~~~~~~~G~~-~~-~r~~~~~~~~~~------~~--~~-~l~s~~Pil~~i-~ 213 (385)
T PF04165_consen 148 Y--PGIILASALSGISVGEFVLAMWPITLLAFLIGWL-FF-LRPLKKSEKKPR------SL--KD-LLKSLWPILVII-L 213 (385)
T ss_pred h--hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH-HH-hccccccccCCc------ch--HH-HHHHHhHHHHHH-H
Confidence 1 33333 3345899999999999999888887764 22 233322211110 01 11 11111 11111 1
Q ss_pred HHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh-cCChHHHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 045863 379 VPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS-RIDTQGALFFLGILLSVSSLEAAGLLREIANY 457 (537)
Q Consensus 379 l~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~-~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~ 457 (537)
+.+ .+++|.....+.+.....+.+. . +..+.++.++ ..+|..++...+.+..-+.++.||..+.+++.
T Consensus 214 l~v---~~~l~~~~~~~~~~l~~~~~~~----~----~~~~~~~~l~~a~~~ki~~~i~~im~Fk~~l~~tG~~~~l~~~ 282 (385)
T PF04165_consen 214 LSV---LFKLPLALGLLIALLAILIYNR----F----RRKEIKEVLKEALEPKILLLIIGIMIFKEILEATGVVEELPEF 282 (385)
T ss_pred HHH---HHcchHHHHHHHHHHHHHHHhc----c----CHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 111 2356665444333333222221 0 1113457776 69999999999999999999999999999998
Q ss_pred HHhhhhhhHH-HH---HHHHHHHHhHchHHHHHHHHhhhh-ccCCCCChHHHHHHHHHHHHhhhh
Q 045863 458 LDAHISNIDL-IA---SAIGVVSAVIDNVPLVAATMGMYD-LTSFPQDSKFWQLIAYCAGTGGSM 517 (537)
Q Consensus 458 l~~~i~~~~~-i~---~i~~~lS~~isNtp~va~llpv~~-~~~~~~~~~~~laLa~~a~iGg~l 517 (537)
+.+.--.... +. ++.++++. .+.+.+.+.+|+.. ..+ . .....+++..+..|.+
T Consensus 283 l~~~~ip~~li~~lipFivG~~TG--i~~a~vgi~fPll~~l~~---~-~~~~~la~~~g~~Gvm 341 (385)
T PF04165_consen 283 LSSLGIPPFLIIALIPFIVGLITG--ITQAFVGIAFPLLAPLIG---G-LPYLVLAYASGFAGVM 341 (385)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHhcc---c-chHHHHHHHHHHHHHh
Confidence 8774222222 22 22333333 13556677788873 221 1 3345678888876664
No 67
>COG3069 DcuC C4-dicarboxylate transporter [Energy production and conversion]
Probab=98.70 E-value=1.4e-05 Score=82.66 Aligned_cols=320 Identities=11% Similarity=0.102 Sum_probs=175.6
Q ss_pred HHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhc-----CCchHHHHHHHHHHHHHHhhccchhHH-
Q 045863 192 EIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITT-----RKPRTLLWVIGFVTFFLSSILDNLTST- 264 (537)
Q Consensus 192 ~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~-----~~~~~l~~~l~l~~~~lS~fl~N~ta~- 264 (537)
.|+++.++..++.-. +....++...-+++.++++|--+.+...++| |+|..++..-.+++.+++.++++.+=.
T Consensus 58 ~di~e~i~~~ls~r~agLgm~Im~~~GfA~yM~~iga~~~~V~l~skPL~~ikspy~ll~~ay~i~~~m~~ai~SAtGlg 137 (451)
T COG3069 58 TDIYEYIKRLLSNRGAGLGMMIMALCGFARYMTHIGANDAVVKLASKPLKYIKSPYLLLIAAYFVACLMSLAIPSATGLG 137 (451)
T ss_pred hhHHHHHHHHHhcccccHHHHHHHhhcHHHHHHHhChhHHHHHHHhchhhhhcccHHHHHHHHHHHHHHHHHcccccchH
Confidence 356665555555554 8999999999999999999999999888876 578888888899999999999876654
Q ss_pred ----HHHHHHHHHhCCChhHHHHHHHHHHHHHhh-ccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 265 ----IVMVSLLRKLVPPSEYRKLLGAVVVIAANA-GGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 265 ----~im~PI~~~l~~p~~~~~~~l~~va~aan~-Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
+.+.|+..+++-.+.. +.++.|.. +..+.|.. .-..++.+..+++..||+..--+|..++.++.....
T Consensus 138 ~llmaTLfPvlv~~Gvsr~a------aaAi~Ast~~i~lsp~s-~~sv~aAe~sgm~i~~~~~~~~lpv~i~~iI~~ai~ 210 (451)
T COG3069 138 VLLMATLFPVLVNLGVSRGA------AAAICASTAAIILSPTS-GDSVLAAQVSGMKIADFAFHYQLPVSIAAIIGMAIA 210 (451)
T ss_pred HHHHHHHHHHHHHhcccchh------hHHHhhchHHheeCCCC-cchHHHHHhcCCceEeeeeccCcHHHHHHHHHHHHH
Confidence 3456888887432221 34444443 44455543 233356666788888877666666555555444433
Q ss_pred Hhh--ccccCCCcCCccccccccCCc--hhH-HHHHHH--HHHHHHHH--HHhhhcCCChHHHHHHHHHHHHHHhhhccc
Q 045863 340 SLT--SEVNGKGQESSNVLASEQMAP--RGQ-LVFAVG--IGALIFVP--VFKALTGLPPYMGILLGLGVLWILTDAIHY 410 (537)
Q Consensus 340 ~~~--~~~~~~~~~~~~l~~~~~i~~--~~~-~~~~l~--l~~lill~--i~~~~~gi~~~~valiga~lLll~~~vl~~ 410 (537)
.++ |-.+++.....|..|..+++. +.. .++=+. ++.+ ... ......+++...+.++++.+..++. .++.
T Consensus 211 hff~qr~~Dkk~~~~~e~~eq~~~~~~~p~~YAilPl~PlI~~l-ig~~~~~l~~ikl~i~t~mlI~l~i~m~ve-firk 288 (451)
T COG3069 211 HFFWQRYLDKKENIEHEMLEQKEIDTVVPAFYAILPLTPLIGVL-IGFDGKGLPQIKLHIITIMLISLLIAMLVE-FLRK 288 (451)
T ss_pred HHHHHHHhhhhcccchhHHHHhhhccCCchhhhhhhhhhHHHHH-HhhccccchhhhhhhHHHHHHHHHHHHHHH-Hhcc
Confidence 221 111111111111112222211 111 111111 1111 100 0011234566677788877666665 3322
Q ss_pred cchhhccCCH-HHHhhcC-C--hHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhh---HHHHHHHHHHHHhH---c
Q 045863 411 GESERQKLKV-PQALSRI-D--TQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNI---DLIASAIGVVSAVI---D 480 (537)
Q Consensus 411 ~~~~~~~i~~-~~~l~~v-~--W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~---~~i~~i~~~lS~~i---s 480 (537)
.+.+|..+. ++..+.. | =+.+.+..+.-..+.+|+.+|..|.+-+.....-.+. .++..+..++++++ .
T Consensus 289 -~n~k~~~~~l~~ff~GMg~~fanVV~liVAa~vFA~GL~tiGaIdalI~~a~~~g~g~~~vmli~~l~~~L~aIvtGSG 367 (451)
T COG3069 289 -FNLKEVMDDLEAFFDGMGDAFANVVMLIVAAGVFAQGLKTIGAIDALISGATSFGSGGIGLMLILVLLTFLAAIVTGSG 367 (451)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHhhHhhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 111121111 1111211 1 2333333333444899999999999988776433222 13334444445443 3
Q ss_pred hHHHHHH--HHhhhh-ccCCCCChHHHHHHHHHHHHhhhhhHHhH
Q 045863 481 NVPLVAA--TMGMYD-LTSFPQDSKFWQLIAYCAGTGGSMLIIGS 522 (537)
Q Consensus 481 Ntp~va~--llpv~~-~~~~~~~~~~~laLa~~a~iGg~lTpiGS 522 (537)
|-|..+. +.|-.+ ..+.+ +..+.+....++++|-.+.|+..
T Consensus 368 nApf~AF~~lip~~Aa~lgi~-~v~l~mpm~~As~igRt~SPisg 411 (451)
T COG3069 368 NAPFIAFVELIPKLAAGLGIN-PVYLIMPMLQASALGRTLSPVSG 411 (451)
T ss_pred CchhhhHHhhcchhhhhcCCC-hHHHhhhHHHHHhhccccccccc
Confidence 6665532 233332 24444 34556677888999999999873
No 68
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=98.68 E-value=1.8e-05 Score=89.02 Aligned_cols=304 Identities=13% Similarity=0.125 Sum_probs=167.4
Q ss_pred HHHHHHHHHhChHHHHHH---HHhcCCchHHHHHHHHHHHHHHhhccc----hhHH-HHHHHHHHHhCCChhHHHHHHHH
Q 045863 216 MTIVEIVDAHQGFKLVTD---NITTRKPRTLLWVIGFVTFFLSSILDN----LTST-IVMVSLLRKLVPPSEYRKLLGAV 287 (537)
Q Consensus 216 ~ii~~~l~~tGl~~ria~---~l~~~~~~~l~~~l~l~~~~lS~fl~N----~ta~-~im~PI~~~l~~p~~~~~~~l~~ 287 (537)
++.++.++++|..||+-+ .+.++.+-+......+.+.+..+...+ ++++ .+++|.++|.+-++++ ..+
T Consensus 175 il~G~ll~~~G~~~~li~~a~~l~G~~rGGla~vaV~as~lfg~iSGS~~A~va~~G~itiP~Mkk~GY~~~~----Aaa 250 (613)
T TIGR02123 175 ILFGAFLQKSGVGKFFIDLAFALAGKRRGGPAKVAVISSGLMGMISGSSVANVVTTGSFTIPLMKRAGYKPEF----AGA 250 (613)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHcCCCHHH----HHH
Confidence 456778899999999554 556655556666666777777777533 3333 5678999887533333 233
Q ss_pred HHHHHhhccccccccchhh-hhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHhh-cc--ccCCCcCCccccccccCCc
Q 045863 288 VVIAANAGGAWTPIGDVTT-TMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SE--VNGKGQESSNVLASEQMAP 363 (537)
Q Consensus 288 va~aan~Gg~~TpiG~~~N-ll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~--~~~~~~~~~~l~~~~~i~~ 363 (537)
+.-++..+|...|=..+.. .+.+...+.|..+.+.....|+++..+....+.+++ +| .+..+ +++.++..+..
T Consensus 251 v~AaastlG~iiPPsmg~~afi~a~~~~vs~~~lf~AgiiPgll~~~~l~~~v~~~a~k~~~~~~~--~~~~~~~~~~~- 327 (613)
T TIGR02123 251 VEAAASTGGQIMPPIMGAAAFIMAEFLGIPYTEIIIAAIIPALLYFFGVFMQVHLEAKKQGLKGLS--KEQLPSPKTVL- 327 (613)
T ss_pred HHHHhhhcccccCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--chhhHHHHHHH-
Confidence 4444444555544222112 234556689999999999999987665444333332 22 22111 11111110100
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHH---hh---cCChHHHHHHHH
Q 045863 364 RGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQA---LS---RIDTQGALFFLG 437 (537)
Q Consensus 364 ~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~---l~---~v~W~tLl~f~g 437 (537)
++ .+ ...+-.+++..++. .|..|+-.+..++...++.+. +.+ .+++++|++. ++ +..=.+.+..++
T Consensus 328 ~~-~~-~lllPvivL~~il~--~g~TpteAa~~a~~~al~v~~-~~~---~~r~l~~~~l~~~l~~~a~~~~~I~~iia~ 399 (613)
T TIGR02123 328 KA-GW-YLLIPLVLLIVLLL--VGYSPIRAAFYSIALTLIVSL-LSR---KDTRMGLGEIFGALEDGARNAVPVAAACAG 399 (613)
T ss_pred HH-HH-HHHHHHHHHHHHHH--cCcCHHHHHHHHHHHHHHHHH-HHH---hccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 11111121222211 246677777777665555542 210 0123455443 32 223345555666
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHhhhh-hhHHH----HHHHHHHHHhHchHHHHHHHHhhhh--ccCCCCCh-HHHHHHHH
Q 045863 438 ILLSVSSLEAAGLLREIANYLDAHIS-NIDLI----ASAIGVVSAVIDNVPLVAATMGMYD--LTSFPQDS-KFWQLIAY 509 (537)
Q Consensus 438 lf~l~~~L~~tG~~~~la~~l~~~i~-~~~~i----~~i~~~lS~~isNtp~va~llpv~~--~~~~~~~~-~~~laLa~ 509 (537)
...++..+..+|+.+.+++.+.+..+ +.+.+ .++..++..+++.++....+.|+.. ..+.+.++ .+-+.+.+
T Consensus 400 a~i~~~~lt~tGl~~~l~~~i~~l~~~~~~~~Lll~~l~~lilGm~l~~~a~~ii~~pi~~P~l~~lGidpi~~~~~v~~ 479 (613)
T TIGR02123 400 AGIIIGVVTLTGLGLKISNDLLDLAGGNLFLLLILTMIACIILGMGLPTTANYIITATLAAPALIALGVPPIAAHMFVFY 479 (613)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 66678899999999999999998765 44432 3445777889999999988888762 23333332 22223344
Q ss_pred HHHHhhhhhHHhHHHHHHHHhhcCcc
Q 045863 510 CAGTGGSMLIIGSAAGVAFMGMEKVD 535 (537)
Q Consensus 510 ~a~iGg~lTpiGS~an~i~~g~~~~~ 535 (537)
...+|...-|+| .+-....+.+|.+
T Consensus 480 ~~~ig~iTPPvg-l~lfvaa~Ia~~~ 504 (613)
T TIGR02123 480 FGILADITPPVA-LAAFAAAGIAGAD 504 (613)
T ss_pred HHHHHcCCCCch-HHHHHHHhhcCCC
Confidence 445554333555 6666667766655
No 69
>COG2610 GntT H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]
Probab=98.60 E-value=5.8e-05 Score=81.24 Aligned_cols=105 Identities=9% Similarity=0.090 Sum_probs=80.7
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTLL 244 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l~ 244 (537)
++.-...++++.+..+.+-. +.++.++.+.+++.++- ..-..+...-+++.-+|++|..+++|+.+.|+ ..+|..
T Consensus 23 v~~flal~l~al~~gl~~Gm---~~~~i~~~i~~G~ggtlg~i~~Vi~lGam~GkLle~sGaA~~IA~tii~~~G~kr~~ 99 (442)
T COG2610 23 VHPFLALLLVALLVGLLGGM---PLLKVVGTIMKGFGGTLGSLALVIGLGAMLGKLLEDSGAAESIADTLIRKFGEKRAL 99 (442)
T ss_pred hhHHHHHHHHHHHHHHHcCC---ChHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhCcchHH
Confidence 77777777776666555532 55566676777666665 44445555678899999999999999999874 566788
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHh
Q 045863 245 WVIGFVTFFLSSILDNLTSTIVMVSLLRKL 274 (537)
Q Consensus 245 ~~l~l~~~~lS~fl~N~ta~~im~PI~~~l 274 (537)
+.+.+.+++++--+.=+.+..++.|+++++
T Consensus 100 ~Al~l~g~i~~~~vF~dv~~v~l~Pia~al 129 (442)
T COG2610 100 LALVLAGLILGIPVFFDVGFVLLIPLAFAL 129 (442)
T ss_pred HHHHHHHHHHhhhHHhhhHHHHHHHHHHHH
Confidence 999999999988888888889999998766
No 70
>COG1593 DctQ TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]
Probab=98.50 E-value=0.00018 Score=75.66 Aligned_cols=307 Identities=10% Similarity=0.100 Sum_probs=166.9
Q ss_pred HHHHHHHHH-HHHHHhChHHHHHHHH---hcCCchHHHHHHHHHHHHHHhhccchhHH-----HHHHHHHHHhCCChhHH
Q 045863 211 FLLGAMTIV-EIVDAHQGFKLVTDNI---TTRKPRTLLWVIGFVTFFLSSILDNLTST-----IVMVSLLRKLVPPSEYR 281 (537)
Q Consensus 211 li~g~~ii~-~~l~~tGl~~ria~~l---~~~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~im~PI~~~l~~p~~~~ 281 (537)
+-+=.|+++ +.+++.|+.+|+-+.. .++-+-++.+.-.+.+.+.+....+..+. .++.|.++|-+-|.++.
T Consensus 11 lAiPfFIlaG~lM~~gGi~~Rli~fa~a~vGh~rGGL~~v~i~~s~lf~~iSGSa~Ad~aa~Gsi~ip~M~k~GY~~~~a 90 (379)
T COG1593 11 LAIPFFILAGELMNSGGIAKRLIDFANALVGHIRGGLAYVNIVASMLFGGISGSAVADAAALGSILIPEMKKRGYPAAFA 90 (379)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHhCCccchHHHHHHHHHHHHhcccccHHHHHHHHHHHhHHHHHHcCCCHHHH
Confidence 333344444 7789999999988765 45555677788888888888886443333 46678887764443331
Q ss_pred HHHHHHHHHHHhhccccccccchhhhhhHh-cccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCCccccccc
Q 045863 282 KLLGAVVVIAANAGGAWTPIGDVTTTMLWI-HGQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQESSNVLASE 359 (537)
Q Consensus 282 ~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~~~l~~~~ 359 (537)
.-.++.++.+|- ..|=+ .++++.+ ..+.|..+-+..+..|+++..+...+..|++ |+.+-+.++....+|.
T Consensus 91 ---a~l~a~s~~ig~-lIPPS--i~~IIyg~~a~~SI~~LF~aGi~PGlLl~~~lm~~~~~~a~~~~~~~~~~~s~~e~- 163 (379)
T COG1593 91 ---AALTAASGIIGP-LIPPS--IPFIIYGVAAGVSIGKLFVAGIVPGLLLTLALMVVAYIVARKRGYPREERASFKER- 163 (379)
T ss_pred ---HHHHHhhccccc-cCCCC--chHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCHHHH-
Confidence 111222222232 22212 2333333 3478999999899999987766444334442 2211111100001111
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhh------cCChHHHH
Q 045863 360 QMAPRGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALS------RIDTQGAL 433 (537)
Q Consensus 360 ~i~~~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~------~v~W~tLl 433 (537)
.+--.+....+.+-.+++..+.... ..|+-.+-+++...++++.++ |+ .++|+|..+ +..=.+++
T Consensus 164 -~~~~~~a~~aLllpvIIigGi~~G~--fTpTEaa~iav~yal~v~~~v-Yr-----~l~~~~l~~~l~~a~~~t~~Vm~ 234 (379)
T COG1593 164 -LKAAVKALWALLLPVIIIGGIRSGI--FTPTEAAAIAVLYALLVGAFV-YR-----ELTLKELPKVLLEAVKTTAVVMF 234 (379)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHH-Hh-----hccHHHHHHHHHHHHHHHHHHHH
Confidence 1100111111112122122222221 356666666666555555222 22 234443221 22223444
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHH----HHHHHHHHHHhHchHHHHHHHHhhh-h-ccCCCC-ChHHHHH
Q 045863 434 FFLGILLSVSSLEAAGLLREIANYLDAHISNIDL----IASAIGVVSAVIDNVPLVAATMGMY-D-LTSFPQ-DSKFWQL 506 (537)
Q Consensus 434 ~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~----i~~i~~~lS~~isNtp~va~llpv~-~-~~~~~~-~~~~~la 506 (537)
..++--..+-.+..+++-+.+++++.+...+.+. +.++..++-.|+|-+|...++.|++ . ..+.+. +-.+-..
T Consensus 235 iva~a~~f~~~lt~~~vp~~la~~~~~~~~~~~~~ll~inl~llvvG~fmd~~a~ilil~Pil~Pi~~~~GIDPvhfGvv 314 (379)
T COG1593 235 IVAAAAAFAWLLTVEQVPQQLADWLLSLSDSPLVVLLVINLLLLVVGTFMDLTAAILILTPILLPIAAALGIDPVHFGVV 314 (379)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhCCCceeeHHH
Confidence 4555555667799999999999999998777653 3455578889999999999888876 2 223333 3334455
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHHhhcCc
Q 045863 507 IAYCAGTGGSMLIIGSAAGVAFMGMEKV 534 (537)
Q Consensus 507 La~~a~iGg~lTpiGS~an~i~~g~~~~ 534 (537)
+.+-..+|..--|+|. .=.+.++.+|.
T Consensus 315 ~v~Nl~IGliTPPvG~-~Lfv~s~V~~~ 341 (379)
T COG1593 315 FVLNLSIGLITPPVGM-VLFVASAVGKV 341 (379)
T ss_pred HHHHHHhhCCCCCcch-hHHHHHhhcCC
Confidence 5666678887788883 22334444444
No 71
>PF07158 MatC_N: Dicarboxylate carrier protein MatC N-terminus; InterPro: IPR009827 This entry represents the N-terminal region of the bacterial dicarboxylate carrier protein MatC. The MatC protein is an integral membrane protein that could function as a malonate carrier [].
Probab=98.46 E-value=8.4e-06 Score=75.19 Aligned_cols=120 Identities=14% Similarity=0.219 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHH-HhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHH
Q 045863 143 NQDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIV-RSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEI 221 (537)
Q Consensus 143 ~~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~-gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~ 221 (537)
+.+.+.++.++++++.-.+++ ++.+..++..+.++-.+ . | .+.+|..+++.+ ++.++++|...+...
T Consensus 2 ~~~iisl~~Lv~~i~ig~~~k---iNiGllAi~~A~vig~~~~--g-~~~~~ii~gfP~------~lf~~l~GVt~lf~i 69 (149)
T PF07158_consen 2 SIQIISLLALVAVIVIGFVRK---INIGLLAIAFAFVIGTFLA--G-MSDKEIIAGFPT------SLFITLVGVTLLFGI 69 (149)
T ss_pred CHHHHHHHHHHHHHHHHHccc---cchHHHHHHHHHHHHHHHc--C-CCHHHHHhhCCH------HHHHHHHHHHHHHHH
Confidence 334556666666666666677 99999999888665432 2 2 278888876654 999999999999999
Q ss_pred HHHhChHHHHHHHHh---cCCchHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHh
Q 045863 222 VDAHQGFKLVTDNIT---TRKPRTLLWVIGFVTFFLSSILDN-LTSTIVMVSLLRKL 274 (537)
Q Consensus 222 l~~tGl~~ria~~l~---~~~~~~l~~~l~l~~~~lS~fl~N-~ta~~im~PI~~~l 274 (537)
.+++|-.|+++++.. |+++..+-+.+++++++++++.+. .++.+++.|+...+
T Consensus 70 A~~NGTle~la~~~v~~~~~r~~liP~v~f~~~~~lsa~G~g~~~~~Ai~aPia~~l 126 (149)
T PF07158_consen 70 AQVNGTLELLAKKAVRLVGGRPALIPWVMFLLAAVLSAIGAGSIAAVAIMAPIAMSL 126 (149)
T ss_pred HHHcCHHHHHHHHHHHHcCCCceehHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 999999999999885 568888999999999999999875 46668888887544
No 72
>KOG1281 consensus Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters [Inorganic ion transport and metabolism]
Probab=98.43 E-value=3.4e-07 Score=99.85 Aligned_cols=123 Identities=14% Similarity=0.212 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh----CCCh
Q 045863 206 SEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL----VPPS 278 (537)
Q Consensus 206 ~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l----~~p~ 278 (537)
|++++++.|.+.++.+.+++|+.++|+..+.. -+...+...+.++..+++.|.+|++++.+++||...+ ..+.
T Consensus 433 WsIvlLlgGGfALakgv~sSGLs~~I~~~L~~l~~~p~~~i~li~~ll~~v~TeF~Sntata~IfiPIl~ela~~l~~hp 512 (586)
T KOG1281|consen 433 WSIVLLLGGGFALAKGVSSSGLSSLIGNALKPLESLPVFAILLIFSLLILVVTEFVSNTATASIFIPILAELAEALGIHP 512 (586)
T ss_pred chHhhhhccchhhhhhcccccHHHHHHHhhhhcccCChHHHHHHHHHHHHHHHHHhcchhheeehHHhHHHHHHhcCCCC
Confidence 59999999999999999999999999998843 4778889999999999999999999999999998655 2222
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHH
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSL 332 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l 332 (537)
.+ ++++.+.+|.. +++.|+++|||.++.+.+++.-.|+.+.+....+.+.
T Consensus 513 ly---l~lp~tl~~Sf-Af~LPvstpPNaivfs~~~~k~~dm~~~G~~l~i~~~ 562 (586)
T KOG1281|consen 513 LY---LMLPTTLACSF-AFMLPVSTPPNAIVFSMGDIKGKDMLKVGLFLNIGGP 562 (586)
T ss_pred ce---eehhHHHHHHH-HHhcCCCCCCCeEEEeecccchhhHhhhccchhHHHH
Confidence 23 35678888876 4789999999999988888888898887776655443
No 73
>COG2056 Predicted permease [General function prediction only]
Probab=98.31 E-value=0.0015 Score=67.73 Aligned_cols=259 Identities=14% Similarity=0.149 Sum_probs=122.8
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc---C-----CchHHHHHHHHHHHHHHhhccch
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT---R-----KPRTLLWVIGFVTFFLSSILDNL 261 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~---~-----~~~~l~~~l~l~~~~lS~fl~N~ 261 (537)
+.+|..+.+.+++.+..++-+=-+-.=-++.++.|||+.|.+++++.+ + +....=+.+.++-.++|.+-.|.
T Consensus 39 ~l~eti~~f~~GlgG~a~vALSYalLGafAvaIsksGltd~l~~kvi~~i~~~~~~~~~~~~K~~l~~~i~~~a~~SQNl 118 (444)
T COG2056 39 GLTETINAFISGLGGNANVALSYALLGAFAVAISKSGLTDVLAKKVIRLLGGDESRRGKTLKKYLLLLIILLIACFSQNL 118 (444)
T ss_pred cHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhcCCccccchhhHHHHHHHHHHHHHHhcCCc
Confidence 566777777777666554443222233456788999999999998753 1 11122344555556777777776
Q ss_pred hHH-HHHHHH----HHHhCCChhHHHHHHHHHHH--HHhhccccccccchh---hhhhHh----cccCChHHHHHHhhHH
Q 045863 262 TST-IVMVSL----LRKLVPPSEYRKLLGAVVVI--AANAGGAWTPIGDVT---TTMLWI----HGQISTLPTMKSLFIP 327 (537)
Q Consensus 262 ta~-~im~PI----~~~l~~p~~~~~~~l~~va~--aan~Gg~~TpiG~~~---Nll~~~----~~~isf~~~~~~~~pp 327 (537)
--+ .-++|+ ..++.+.-+.-|+. ++++. +-..-=...|+|-.. +++..+ ...++..+-.+.+..|
T Consensus 119 iPVHIAFIPilIPPLL~lfn~LkiDRR~-vAc~ltFGL~apYi~LPvGFG~IF~~ii~~n~~~a~~~~~~~~V~~am~ip 197 (444)
T COG2056 119 IPVHIAFIPILIPPLLSLFNKLKIDRRL-VACVLTFGLTAPYILLPVGFGLIFQSIILDNINAAGVSLSVNQVPKAMWIP 197 (444)
T ss_pred cceeeeeehhhhhHHHHHHHHhhhhHHH-HHHHhhcccccceeEecchHHHHHHHHHHHHHHhcCCCcchhhhHHHHHHH
Confidence 554 333343 33442222221221 22222 211122234555432 222222 2356666666677777
Q ss_pred HHHHHH-HHHHHHH-hhcc-ccCCCc--CCccc-cccccCCchhHHHHHHHHHHHHHHHHHhhhc-CCChHHHHHHHHHH
Q 045863 328 SAVSLA-VPLAFLS-LTSE-VNGKGQ--ESSNV-LASEQMAPRGQLVFAVGIGALIFVPVFKALT-GLPPYMGILLGLGV 400 (537)
Q Consensus 328 ~lv~l~-v~~~ll~-~~~~-~~~~~~--~~~~l-~~~~~i~~~~~~~~~l~l~~lill~i~~~~~-gi~~~~valiga~l 400 (537)
.+-+.+ +...+++ |+|| +.+..+ +.++. ++..+.++ ++.+.. ++.++..+...-.. .=..-..++.|..+
T Consensus 198 ~lgMi~GLl~ai~~~YrKpReY~~~~~~~~~~~~~~~~~~~~-~~~~~a--lvaiv~af~vQl~~~~~smilgal~gliv 274 (444)
T COG2056 198 GLGMIVGLLLAIFVSYRKPREYQTNEIEEAENAIEDYAALEE-YKLALA--LVAIVVAFAVQLLTFTDSMILGALAGLIV 274 (444)
T ss_pred HHHHHHHHHHHHHHhhcCCccccccccchhhhhhhhhcchhh-HHHHHH--HHHHHHHHHHHHHhccccchHHHHHHHHH
Confidence 765443 2222222 2232 211111 11111 11111112 222222 12221111111111 11223567788888
Q ss_pred HHHHhhhccccchhhccCCHHHHhhcCC--------hHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhh
Q 045863 401 LWILTDAIHYGESERQKLKVPQALSRID--------TQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNI 465 (537)
Q Consensus 401 Lll~~~vl~~~~~~~~~i~~~~~l~~v~--------W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~ 465 (537)
+++.+ ++ +|||.-+..+ -.-+++.+..| +..+++||-.+.+.+...+.++++
T Consensus 275 ~~~~g-v~----------~~ke~d~~~~~G~kmMa~IgFVMl~AaGf--a~Vi~~TG~V~~LV~s~~~~~g~s 334 (444)
T COG2056 275 FFLSG-VI----------KWKETDDVFTEGVKMMAFIGFVMLVAAGF--AEVINATGAVEELVESSSSIIGQS 334 (444)
T ss_pred HHHhc-ce----------ehhhhHHHHHhhHHHHHHHHHHHHHHhHH--HHHHHhccCHHHHHHHHHHHhccc
Confidence 77776 43 3433222111 12233334444 556999999999999999888654
No 74
>PF07399 DUF1504: Protein of unknown function (DUF1504); InterPro: IPR009978 This family consists of several hypothetical bacterial proteins of around 440 residues in length. The function of this family is unknown.
Probab=98.29 E-value=0.00026 Score=74.46 Aligned_cols=314 Identities=18% Similarity=0.190 Sum_probs=151.9
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHh----ChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAH----QGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTI 265 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~t----Gl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~ 265 (537)
..+++.+.++. .+|.+..+ ++..|++++.=--- ...+++++ +-+.++....+.+..+.=++.+|+...++..
T Consensus 85 G~~~a~~Y~~s--rnytEplF-VfvIMviA~SrPIl~~a~~~v~~iAr-lp~~s~~a~~~~~L~~~PLlGSfITEpaAMT 160 (438)
T PF07399_consen 85 GWKAAIAYLES--RNYTEPLF-VFVIMVIAASRPILQFAERLVRFIAR-LPKPSPVAWWWLILTLVPLLGSFITEPAAMT 160 (438)
T ss_pred CHHHHHHHHhc--cCCCccHH-HHHHHHHHccchHHHHHHHHHHHHHh-CCCCCchhHHHHHHHHHHhhhhhhccHHHHH
Confidence 34556555542 23434443 33444444321111 23344444 4345677777788888888999998877764
Q ss_pred HHHHHH-HHh--CCChhHHHHHHHHHHHHHh--hccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHH-
Q 045863 266 VMVSLL-RKL--VPPSEYRKLLGAVVVIAAN--AGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFL- 339 (537)
Q Consensus 266 im~PI~-~~l--~~p~~~~~~~l~~va~aan--~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll- 339 (537)
+-.=+. ++. .++++.. +|...-..-.| +||.+|....||-+|+.+.-+-+..-.+...+-=..+..++.-...
T Consensus 161 laAllL~~~~f~~~~s~~l-kYaTLGvLFvNISIGGtLT~fAAPPVLMVA~~w~Wd~~fM~~~FGWKAaiai~ina~~~~ 239 (438)
T PF07399_consen 161 LAALLLRDQFFRLGPSPRL-KYATLGVLFVNISIGGTLTSFAAPPVLMVASTWGWDSAFMLTHFGWKAAIAILINATVYT 239 (438)
T ss_pred HHHHHHHHHhccCCCCHHH-HHHHHHHHheEeeecccccccccCcceeEecccCCChHHHHHHcCHHHHHHHHHHHHHHH
Confidence 433333 333 2333322 34433333345 4999999999999888765433321111111111222222222222
Q ss_pred -HhhccccCCCcCCccc-cccccCCchhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhcc
Q 045863 340 -SLTSEVNGKGQESSNV-LASEQMAPRGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQK 417 (537)
Q Consensus 340 -~~~~~~~~~~~~~~~l-~~~~~i~~~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~ 417 (537)
.++|++++-.+..++. .+.+++ +. .+..+-+... ...++. +- -+.++|+..++.++..--+.. .+++
T Consensus 240 ~~fRkel~~l~~~~~~~~~~~~~v--P~-~v~~vHl~f~-g~V~~a---hh---p~iF~G~lfLfFLGf~~ay~~-yQ~~ 308 (438)
T PF07399_consen 240 LLFRKELARLPKTAQATTSSEERV--PW-WVILVHLLFV-GVVVFA---HH---PVIFMGALFLFFLGFTQAYKR-YQSP 308 (438)
T ss_pred HHHHHHHHhccccccccccccCCC--CH-HHHHHHHHHH-HHHHHh---cC---hHHHHHHHHHHHHHHHHHHHh-hccc
Confidence 2233333211111110 011111 11 2222211111 111111 12 234567556666663210100 1123
Q ss_pred CCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHchHHHHHHHHhhhhccCC
Q 045863 418 LKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAIGVVSAVIDNVPLVAATMGMYDLTSF 497 (537)
Q Consensus 418 i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~~~lS~~isNtp~va~llpv~~~~~~ 497 (537)
+..+|.+ =+=+|++|+.+ -+++++ |=-+-+.+.++ ....++.+..+|++.||-+.+.+- ..+. +.
T Consensus 309 l~Lre~l-----LVgFFLaGLVv-lGglQ~-----WWlqpll~~m~-~~~lf~ga~~LTa~tDNAalTYLg-slv~--g~ 373 (438)
T PF07399_consen 309 LILREAL-----LVGFFLAGLVV-LGGLQQ-----WWLQPLLSGMS-PLALFFGATALTAFTDNAALTYLG-SLVP--GL 373 (438)
T ss_pred hhhhHHH-----HHHHHHhhHHH-cCchHH-----HHHHHHHhcCC-hhHHHHHHHHHHHHhhhHHHHHHH-Hhcc--CC
Confidence 4445543 23344455444 444443 32222222121 123567889999999999887532 1221 11
Q ss_pred CCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 498 PQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 498 ~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
+...=+++..|+-.||-+|.|+.+||+.-+...|..|
T Consensus 374 --sd~~kYalVAGAVtGGGLTVIANAPNpaG~aiLr~~F 410 (438)
T PF07399_consen 374 --SDAFKYALVAGAVTGGGLTVIANAPNPAGQAILRKHF 410 (438)
T ss_pred --CHHHHHHHHhheeccCceeEeccCCChhhHHHHhccC
Confidence 2344567777888888899999999999988888776
No 75
>PRK10654 dcuC C4-dicarboxylate transporter DcuC; Provisional
Probab=98.25 E-value=0.00017 Score=78.59 Aligned_cols=145 Identities=18% Similarity=0.202 Sum_probs=105.8
Q ss_pred CHHHHHHHhhhhh----ccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhc-cchh
Q 045863 190 STEIAVSELSRAS----AEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSIL-DNLT 262 (537)
Q Consensus 190 ~~~~a~~~~~~~l----s~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl-~N~t 262 (537)
+.+|.++.+++.. ..+.+++.+++++.+++++++.+|+.+.++..+.+ .+...+...+.++.++.+..+ +|++
T Consensus 291 ~~k~v~~~l~~~~~GMg~~~a~Vv~liiaAgvfs~gL~~~Gl~~~l~~~l~~lg~~~~~illv~~il~~l~~~~~GSg~a 370 (455)
T PRK10654 291 NTKKVFSGLEVAYRGMADAFAGVVMLLVAAGVFAQGLSTIGFIQSLISLATSFGSAGIILMLVLVILTMLAAITTGSGNA 370 (455)
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHccchHH
Confidence 6777766555432 23338999999999999999999999999988753 466667777778888888888 7777
Q ss_pred HHHHHHHHH----HHh-CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHH
Q 045863 263 STIVMVSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 263 a~~im~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
+...+.|++ .++ .+|.. +.+.+..++++|....|++...- ...+..+++..|..|...+|.++.+++..+
T Consensus 371 ~~~af~pi~~pia~~lG~~pv~----~~~~~~~~~~~G~~~sPvs~~ii-~~ag~a~~~~~~ivKrt~ip~ii~~iv~~i 445 (455)
T PRK10654 371 PFYAFVELIPKLAHSSGINPAY----LTIPMLQASNLGRTISPVSGVVV-AVAGMAKISPFEVVKRTSVPVLVGLLIVIV 445 (455)
T ss_pred HHHHHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHhCcCCcchhhHh-hhhcccCCCHHHHHHhhhHHHHHHHHHHHH
Confidence 776666665 555 35533 34678888899888888864332 234456899999999988888877765554
Q ss_pred HH
Q 045863 338 FL 339 (537)
Q Consensus 338 ll 339 (537)
+.
T Consensus 446 ~~ 447 (455)
T PRK10654 446 AT 447 (455)
T ss_pred HH
Confidence 33
No 76
>PF07854 DUF1646: Protein of unknown function (DUF1646); InterPro: IPR012443 Some of the members of this family are hypothetical bacterial and archaeal proteins, but others are annotated as being cation transporters expressed by the archaeon Methanosarcina mazei (Methanosarcina frisia) (Q8PXG5 from SWISSPROT, Q8PXG7 from SWISSPROT and Q8PXG8 from SWISSPROT).
Probab=98.01 E-value=0.0013 Score=67.44 Aligned_cols=93 Identities=16% Similarity=0.211 Sum_probs=63.4
Q ss_pred CchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChH
Q 045863 239 KPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTL 318 (537)
Q Consensus 239 ~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~ 318 (537)
+-+.+.+.+.++-.+.|++++-..+.+++.-++..+--+++++.++....+++-.+|.+.||+|.|...++.+..+-+|+
T Consensus 98 ~~k~~vfl~vviLGL~SSiITAIIAAliLvEIv~~lpl~R~~Kv~~~ViaCFsIGlGAaLTPiGEPLSTIaVSKL~a~F~ 177 (347)
T PF07854_consen 98 PLKVFVFLLVVILGLSSSIITAIIAALILVEIVNALPLDRKSKVKLVVIACFSIGLGAALTPIGEPLSTIAVSKLNADFF 177 (347)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEeehhHHHHhcCccccCCCCCcHHHHHHHHcccHH
Confidence 44455566666778889999988899998888766621122211122345666678999999999999999888888876
Q ss_pred HHHHHhhHHHHHH
Q 045863 319 PTMKSLFIPSAVS 331 (537)
Q Consensus 319 ~~~~~~~pp~lv~ 331 (537)
-.+...++..+..
T Consensus 178 yL~~~lg~yIi~~ 190 (347)
T PF07854_consen 178 YLFRLLGIYIIPG 190 (347)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555444433
No 77
>PRK11588 hypothetical protein; Provisional
Probab=98.01 E-value=0.0033 Score=68.92 Aligned_cols=314 Identities=15% Similarity=0.087 Sum_probs=144.5
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhh-c-cchhHH--HHHHHHHHHhC-CCh
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSI-L-DNLTST--IVMVSLLRKLV-PPS 278 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~f-l-~N~ta~--~im~PI~~~l~-~p~ 278 (537)
+++++++..--....+++||..|.--.++.+ ++...++..++++=.+.... . .+-+.. .+++|++++++ |+-
T Consensus 111 ~ii~filiiGG~f~vi~~TGAi~~~i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi~v~l~~alGyD~i 190 (506)
T PRK11588 111 GIIMFMLVIGGAFGIVMRTGTIDNGILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAIIIAPLMVRLGYDSI 190 (506)
T ss_pred ceeehhhHHhhHHHHHHHhchHHHHHHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcHH
Confidence 6666666666667889999999887777653 34444444444443344333 2 232222 56778888884 432
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHh-cccCChHH--HHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCC--
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI-HGQISTLP--TMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQES-- 352 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-~~~isf~~--~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~-- 352 (537)
. .+++.+.+...|.++-+=||-+.-++. ..+++.++ +++. ...++..++..++.++| +|.|++++..
T Consensus 191 -v----g~ai~~lg~~iGf~~s~~NPftvgIAQ~iAglp~~SG~~~R~--i~~~v~~~i~i~yv~~YA~kVkkdP~kS~~ 263 (506)
T PRK11588 191 -T----TVLVTYVATQIGFATSWMNPFSVAIAQGIAGVPVLSGSGLRI--VMWVIFTLIGLIFTMVYASRVKKNPLLSRV 263 (506)
T ss_pred -H----HHHHHHHHhhhhhcccccCccHHHHHHHhcCCCccccHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 1 234444433334444443555443433 33555432 3332 22223333333333333 3433322210
Q ss_pred ----c----c--ccccccCCchhHHHHHHHHHHHHH-HHHHhh-hcCCChHHHHHHHHHHHHHHh-hhccccchhhccCC
Q 045863 353 ----S----N--VLASEQMAPRGQLVFAVGIGALIF-VPVFKA-LTGLPPYMGILLGLGVLWILT-DAIHYGESERQKLK 419 (537)
Q Consensus 353 ----~----~--l~~~~~i~~~~~~~~~l~l~~lil-l~i~~~-~~gi~~~~valiga~lLll~~-~vl~~~~~~~~~i~ 419 (537)
+ + ..+..+++.|++.++.++++.+.. .|-... -++++.-...++..+++..+- ..++. .+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~t~r~klvL~~f~~~~~~~i~Gv~~~gW~~~Eia~~Fl~~giv~G~i~~~~~~-----~g~~ 338 (506)
T PRK11588 264 HESDRFFREKQADVEQRPFTFGDWLVLLVLTAVMVWVIWGVVVNAWFIPEIASQFFTMGLVIGLIGVVFRL-----NGMT 338 (506)
T ss_pred ccchhhhhhhhccccccCcChhhHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHhhhhhcc-----CCCC
Confidence 0 1 011235666777776665444422 121111 122333232333333322211 01100 1123
Q ss_pred HHHHhh-------c-CChHHHHHHHHHHHHHHHH-----HHhcHHHHHHHHHHhhhhhh---H---HHHHHHHHHHHhH-
Q 045863 420 VPQALS-------R-IDTQGALFFLGILLSVSSL-----EAAGLLREIANYLDAHISNI---D---LIASAIGVVSAVI- 479 (537)
Q Consensus 420 ~~~~l~-------~-v~W~tLl~f~glf~l~~~L-----~~tG~~~~la~~l~~~i~~~---~---~i~~i~~~lS~~i- 479 (537)
.+|..+ + ..-..++.++..+ .-.+ ++-..+|-+-+.+.+.+.+. . .++++..++.-|+
T Consensus 339 ~~~i~~~f~~Ga~~m~~~aliig~A~~i--~~il~~g~~~~g~iidTIv~~~~~~L~~lp~~~~ai~m~i~~~~lNffIp 416 (506)
T PRK11588 339 VNTMASSFTEGARMMLAPALLVGFAKGI--LLLLGGGEPGDPSVLNTILNSAGGAISGLPDAVSAWFMLLFQSVFNFFVT 416 (506)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhccCccccchHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHeEec
Confidence 333332 1 2222333333333 2235 33335555555555444321 1 1234445555444
Q ss_pred chHHHHHHHHhhhh----ccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 480 DNVPLVAATMGMYD----LTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 480 sNtp~va~llpv~~----~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
|.....++++|+.. ..|.. ++...++.-+|-++.-.+||.. +.-+...+.+|++|
T Consensus 417 SgSGqAaitmPIm~Plad~lGis-rq~avlAfq~GDg~tNlI~Pts-~~lm~~Laia~Ipy 475 (506)
T PRK11588 417 SGSGQAALTMPLMAPLADLVGVN-RQVAVLAFQLGDGFTNIIYPTS-ASLMATLGVCRVDF 475 (506)
T ss_pred ChHHHHHHHHHHHHHHHHHcCCC-HHHHHHHHHHHhHHHHHhhhhH-HHHHHHHHHhCCCH
Confidence 45677777888873 24443 3445556666666665678874 34455566777765
No 78
>PF02652 Lactate_perm: L-lactate permease; InterPro: IPR003804 L-lactate permease is an integral membrane protein probably involved in L-lactate transport.; GO: 0015129 lactate transmembrane transporter activity, 0015727 lactate transport
Probab=97.97 E-value=0.053 Score=60.31 Aligned_cols=103 Identities=16% Similarity=0.085 Sum_probs=63.3
Q ss_pred HHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHH-----HHHHHHHHHHhHchHHHHHHHHhhhh-
Q 045863 420 VPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDL-----IASAIGVVSAVIDNVPLVAATMGMYD- 493 (537)
Q Consensus 420 ~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~-----i~~i~~~lS~~isNtp~va~llpv~~- 493 (537)
+++..|+. |...+-....+.++..++++|+...+++.+.+ .+..+. +.++..|++. |||...+++.+.-.
T Consensus 378 ~~~t~~~~-~~~~i~~~~~~~~a~vm~~SGm~~~la~~~a~-~G~~yp~~aP~lG~lG~FiTG--S~T~SN~lF~~lQ~~ 453 (522)
T PF02652_consen 378 LKKTLKQL-WPPAIAIIFFLALAYVMNYSGMTATLALALAA-TGAAYPFFAPFLGWLGSFITG--SNTSSNALFGPLQVT 453 (522)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-hCccHHHHHHHHHHHhccccc--chHHHHHHHHHHHHH
Confidence 34455544 77888888899999999999999999999998 665432 3344455554 66766665545421
Q ss_pred -ccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHH
Q 045863 494 -LTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFM 529 (537)
Q Consensus 494 -~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~ 529 (537)
..+.+.++. .++-+.+.||.+--+-+++|+.+.
T Consensus 454 ~A~~lgl~~~---l~~Aaq~~Gg~~g~mIsp~~i~~a 487 (522)
T PF02652_consen 454 TAQQLGLPPL---LIAAAQNVGGAMGNMISPQNIVAA 487 (522)
T ss_pred HHHHcCCCHH---HHHHHHHHHHHHHhccCHHHHHHH
Confidence 122332322 233335566665445556666543
No 79
>COG2704 DcuB Anaerobic C4-dicarboxylate transporter [General function prediction only]
Probab=97.97 E-value=0.00037 Score=72.29 Aligned_cols=139 Identities=14% Similarity=0.263 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHH---HHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHh-CCCh
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKL---VTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKL-VPPS 278 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~r---ia~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l-~~p~ 278 (537)
+.++.+++...-+.+++.+|-.|+ +++++.|+||+++-+.-=+++.+++-....--++.-.+|++ ++. ++|+
T Consensus 49 dViliImAVv~aaaamQaaGGLD~mvqiAEkiLRknPK~iT~lAP~Vty~lT~maGTGh~vySilPVI~eVA~~~gIrPe 128 (436)
T COG2704 49 DVILIIMAVVAAAAAMQAAGGLDYMVQIAEKILRKNPKYITILAPFVTYTLTILAGTGHVVYSILPVIAEVAKKNGIRPE 128 (436)
T ss_pred hhHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHhCCCeEEEehhHHHHHHHHhhcCCceeeeehhHHHHHHHHcCCCCC
Confidence 888889999999999999999986 56788999999886665556666665544333444556776 333 5666
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHh--cccCChHHHHHHhhHHHHHHHHHHHHHHHh-hccccCCC
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI--HGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSEVNGKG 349 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~--~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~~~~~~ 349 (537)
+. +.....++..+-...|+....--+.+. ..+.++.+-+....|-.++..++.-++..+ .+++++++
T Consensus 129 RP----ls~avVsSQ~aItASPISAAVV~~~a~l~~~g~~~l~ll~v~IPaTl~g~~~~~l~~~~~gkeL~~Dp 198 (436)
T COG2704 129 RP----LSAAVVSSQIAITASPISAAVVYMSAVLEPLGISYLTLLMVTIPSTLLGVLLMALFVWFRGKELDDDP 198 (436)
T ss_pred Cc----chHHHHHhhhhhhcCchHHHHHHHHHHHhhcCcchheeeeEEecHHHHHHHHHHHHHHHhcccccCCH
Confidence 54 234556777776678886554433332 224444554444455566655543333333 34455443
No 80
>PRK12489 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=97.91 E-value=0.00018 Score=77.80 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=80.3
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH----HHHHHHHHHHHhHchHHH-HHHHHhhhh----cc
Q 045863 425 SRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID----LIASAIGVVSAVIDNVPL-VAATMGMYD----LT 495 (537)
Q Consensus 425 ~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~----~i~~i~~~lS~~isNtp~-va~llpv~~----~~ 495 (537)
.+.||+++++..+++..+++++++|.+|++.+.+.+....+. .+..++..++.|++||++ ++.++|+.. ..
T Consensus 44 ~~~p~~vil~Ilav~~~~a~Lq~TGgld~lv~~~~k~lrk~pk~i~llap~vt~l~afl~~Tg~~v~~~lPVi~~vA~k~ 123 (443)
T PRK12489 44 GKPPVDVMLIILAVVTASATLQAAGGLDVMLQIAERLLRRNPKYITILAPFVTYTLTFLCGTGHVVYSILPIIYDVALKN 123 (443)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHc
Confidence 368999999999999999999999999999998887653222 345666777799999996 788899973 23
Q ss_pred CCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHH
Q 045863 496 SFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAF 528 (537)
Q Consensus 496 ~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~ 528 (537)
+.. +........+++.+|...||+++..|.++
T Consensus 124 gi~-PsrpLa~as~As~lGi~aSpin~~v~~l~ 155 (443)
T PRK12489 124 GIR-PERPMAAASVASQMGITASPVSAAVVSLV 155 (443)
T ss_pred CCC-hhhhHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 444 33334455777889999999998888773
No 81
>COG1906 Uncharacterized conserved protein [Function unknown]
Probab=97.91 E-value=0.015 Score=59.57 Aligned_cols=330 Identities=15% Similarity=0.165 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhc--cchhHHHHHHHHHHHHHHHH
Q 045863 146 LAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASA--EVSEIVFFLLGAMTIVEIVD 223 (537)
Q Consensus 146 ~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls--~~~~~I~li~g~~ii~~~l~ 223 (537)
...+..|.+.++++.. + ++.+..-+.|+..+..+. +|. +.++..+-+..+ ..+..|..++..|.++..++
T Consensus 5 slLl~lF~v~vvli~~-k---vnigiSif~Gal~lall~-Lg~---~g~l~~~~~s~~s~st~~lIviv~fim~l~~~me 76 (388)
T COG1906 5 SLLLSLFTVVVVLIWL-K---VNIGISIFLGALTLALLS-LGI---RGILLSLYLSVSSWSTWRLIVIVIFIMGLGYVME 76 (388)
T ss_pred HHHHHHHHHHHHHHhh-h---hchhhhHHHHHHHHHHHh-cCc---chhHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667777666655 3 567777777776665544 222 222222222222 23488888999999999999
Q ss_pred HhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-CCChhHH-HHHHHHHHHHHhhccccccc
Q 045863 224 AHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-VPPSEYR-KLLGAVVVIAANAGGAWTPI 301 (537)
Q Consensus 224 ~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-~~p~~~~-~~~l~~va~aan~Gg~~Tpi 301 (537)
+.|-.++...-+...-++.-.+.+=.+-+++-+=...-.++.+.-|+.++. .+|++.. +.|-+= ...-...|+
T Consensus 77 ~~G~l~k~~~gll~lfpk~s~~~iPalIGLmPMPgGAliSApmi~p~~~k~~l~pe~kt~iNYwfR-----Hiwe~~WPl 151 (388)
T COG1906 77 QIGYLEKVEEGLLHLFPKHSLWTIPALIGLMPMPGGALISAPMIEPLAKKFGLNPEKKTFINYWFR-----HIWELFWPL 151 (388)
T ss_pred HhchHHHHHhHHHHhcchhHHHHHHHHHcCcCCCCcceEeeeeccccchhccCCHHHHHHHHHHHH-----HHHHHhccc
Confidence 999999999877543223323322222222211111112223344555555 4554421 111100 000111222
Q ss_pred cchhhhhh-HhcccCChHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCcCCccccccccCCchhHHHHHHHHHHHHHHH
Q 045863 302 GDVTTTML-WIHGQISTLPTMKSLFIPSAVSLAVPLAFLSLTSEVNGKGQESSNVLASEQMAPRGQLVFAVGIGALIFVP 380 (537)
Q Consensus 302 G~~~Nll~-~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~l~l~~lill~ 380 (537)
=|..++ ....+++..+....++|..++++...+. .+.+|++++.+..+ +.+-....+.=.+.++
T Consensus 152 --yqaVvi~sav~gvs~~~vs~~~fP~~iia~t~G~l--ff~~~l~~~~~~~r---------nl~~~l~nlyPi~~vl-- 216 (388)
T COG1906 152 --YQAVVITSAVLGVSIREVSVKMFPLTIIALTIGYL--FFNGPLKERLSKSR---------NLRDLLINLYPIAIVL-- 216 (388)
T ss_pred --hHHHHHHHHHhcCcHHHHHHHHhHHHHHHHHHHHH--HhcccchhhhhcCC---------CHHHHHHHHhhHHHHH--
Confidence 122222 2234788889888999998887776653 22334333221111 1111122221111100
Q ss_pred HHhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhc-CChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 045863 381 VFKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSR-IDTQGALFFLGILLSVSSLEAAGLLREIANYLD 459 (537)
Q Consensus 381 i~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~-v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~ 459 (537)
.++-.+++|....-+.+..-..+.+ +. |.-..+|.+|+ .+=..++........-...+++|+.+.+++.+.
T Consensus 217 ~lsvll~Ldll~gs~~~~ls~~i~n-~~-------r~~~l~e~lkrafnprI~~lliavmvfk~vIe~SGl~e~~ae~~l 288 (388)
T COG1906 217 VLSVLLGLDLLYGSFVAFLSISIPN-VF-------RIRYLLEVLKRAFNPRIVLLLIAVMVFKEVIEHSGLVEIFAEIML 288 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-hc-------cHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHhccHHHHHHHHHh
Confidence 1111233443322222222222222 10 11124555552 333366666666777889999999998877765
Q ss_pred hhhhhhHHHHHHHHHHHHhHchH--HHHHHHHhhhh-c-cCCCCChHHHHHHHHHHHHhhhh
Q 045863 460 AHISNIDLIASAIGVVSAVIDNV--PLVAATMGMYD-L-TSFPQDSKFWQLIAYCAGTGGSM 517 (537)
Q Consensus 460 ~~i~~~~~i~~i~~~lS~~isNt--p~va~llpv~~-~-~~~~~~~~~~laLa~~a~iGg~l 517 (537)
... .++.++.+..+++.+.... +++.+.+|... . .++ --+++++..+.+|.+
T Consensus 289 ~f~-aP~al~l~~~fiiGlaTGI~fayvsiafPlL~pff~g~-----~~lalay~ggy~Gvm 344 (388)
T COG1906 289 SFH-APVALFLLLTFIIGLATGIEFAYVSIAFPLLMPFFTGF-----KKLALAYAGGYMGVM 344 (388)
T ss_pred ccc-hhhHHHHHHHHHHHHhhhhHHHHHHHhhhhhHHHhccc-----hHHHHHHHhhhhhee
Confidence 533 2232222222333333222 34444456653 1 232 124677777777764
No 82
>COG1757 NhaC Na+/H+ antiporter [Energy production and conversion]
Probab=97.89 E-value=0.025 Score=62.41 Aligned_cols=171 Identities=11% Similarity=0.048 Sum_probs=104.5
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc-CCchHHH
Q 045863 166 AFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT-RKPRTLL 244 (537)
Q Consensus 166 ~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~-~~~~~l~ 244 (537)
++|.....+.+.+...+.+--...+.++......+.+.+....++.+.+.-.+.+...+.|..++..++..+ -.+..++
T Consensus 43 ~~~~~~~l~~~~iva~~~~~~~~~~~~~~~~~~~~~~~~~~~alli~~~~g~~~~~w~~~g~v~~~~~~gL~~i~~~~~~ 122 (485)
T COG1757 43 NLPAHVALIIAIIVALFIARGLGFNYKDIIILIFLGLLGALTALLILLGIGAAIAAWAASGIVPALVYYGLKLISPSIFF 122 (485)
T ss_pred CcchhHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHhHHHHH
Confidence 367777666666665554421012444443322233334446666666667777778888888888877655 3667777
Q ss_pred HHHHHHHHHHHhhc-cchhHHHH----HHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHH
Q 045863 245 WVIGFVTFFLSSIL-DNLTSTIV----MVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLP 319 (537)
Q Consensus 245 ~~l~l~~~~lS~fl-~N~ta~~i----m~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~ 319 (537)
...++.+.+++..+ ++..+... +.++.++..-|... ..-.+..+|-.|..+.|+.+.+|+ .....+.++.|
T Consensus 123 ~~~f~~t~ivs~~~gts~gt~~t~~~~l~~I~~~~gap~~l---~agai~~GAyfgd~ispisdTt~~-aa~~~~~~~~~ 198 (485)
T COG1757 123 FDDFFITAIVSTATGTSWGTAATSGPALAGIGDSTGAPLAL---TAGAILSGAYFGDKISPLSDTTIL-AAGTQGVDLVD 198 (485)
T ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCHHH---HHHHHHHHHHHHhhhhHhHHHHHH-HhcccccHHHH
Confidence 77788888888776 44444444 44455555444332 122455566668889999999984 55555677788
Q ss_pred HHHHhhHHHHHHHHHHHHHHH
Q 045863 320 TMKSLFIPSAVSLAVPLAFLS 340 (537)
Q Consensus 320 ~~~~~~pp~lv~l~v~~~ll~ 340 (537)
-++.++...+..+++..+.++
T Consensus 199 ~i~~~~y~~~~~~iv~~i~~~ 219 (485)
T COG1757 199 HIKSNFYTTIPAFILALIVYF 219 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 777777666665555544333
No 83
>PRK15060 L-dehydroascorbate transporter large permease subunit; Provisional
Probab=97.78 E-value=0.0056 Score=66.20 Aligned_cols=141 Identities=16% Similarity=0.262 Sum_probs=104.5
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhccchhHHHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSILDNLTSTIVM 267 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl~N~ta~~im 267 (537)
+.++..+.+.+.......+.+++.++..++..+..+|+-+.++..+.+ .++..++..+.++-.++.+|+|..++..++
T Consensus 260 ~~~~l~~~l~~t~~~t~~i~~ii~~a~~f~~~lt~~gvp~~i~~~i~~~~~~~~~~Ll~i~~~~lvlGmfld~~a~ili~ 339 (425)
T PRK15060 260 TFSTLYHVLINAAKTTSVVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAIMVVGMVMDLTPTVLIL 339 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 566666656555445558889999999999999999999999999854 477888888999999999999999999888
Q ss_pred HHHH----HHh-CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHh-cccCChHHHHHHhhHHHHHHHHHHH
Q 045863 268 VSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI-HGQISTLPTMKSLFIPSAVSLAVPL 336 (537)
Q Consensus 268 ~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-~~~isf~~~~~~~~pp~lv~l~v~~ 336 (537)
.|+. +++ .||-++ .+.+.....+|..--|+|. |+.+.. ..+.+..|-++...|..+..+++..
T Consensus 340 ~Pil~Pi~~~~Gidpv~f----gii~~~~~~ig~iTPPvG~--~lfv~~~ia~~~~~~i~~~~~Pf~~~~~~~l~ 408 (425)
T PRK15060 340 TPVLMPLVKEAGIDPIYF----GVMFIINCSIGLITPPVGN--VLNVISGVAKLKFDDAVRGVFPYVLVLYSLLV 408 (425)
T ss_pred HHHHHHHHHHcCCChHHH----HHHHHHHHHHhCCCCCccH--HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7765 555 576554 2334444455655556884 444443 4589999999888887666555444
No 84
>TIGR00771 DcuC c4-dicarboxylate anaerobic carrier family protein. catalyzing fumarate-succinate exchange and fumarate uptake.
Probab=97.77 E-value=0.0022 Score=68.75 Aligned_cols=123 Identities=14% Similarity=0.154 Sum_probs=94.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhcc-chhHHHHHHHHH----HHh-C
Q 045863 204 EVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSILD-NLTSTIVMVSLL----RKL-V 275 (537)
Q Consensus 204 ~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl~-N~ta~~im~PI~----~~l-~ 275 (537)
....++++++++.+++..++.+|+.+.++..+.+ .++........+...++..+++ ++++...+.|++ .++ .
T Consensus 256 ~~~~v~~iI~aA~vF~~~L~~~Gi~~~l~~~l~~~~~~~~~~ll~~~l~~~~lg~~~~s~~a~~~~~~PIl~pia~~~Gi 335 (388)
T TIGR00771 256 SFANVVGLIVAASVFAAGLKTIGAVDAAISFAKESGLGNIFVMWGATIGPFLMALITGSGNAPFIAFNTAIPPHAVELGY 335 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCC
Confidence 3448889999999999999999999999999865 3566667777777778999995 687777777665 455 4
Q ss_pred CChhHHHHHHHHHHHHHhhccccccccchhhhh-hHhcccCChHHHHHHhhHHHHHHH
Q 045863 276 PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTM-LWIHGQISTLPTMKSLFIPSAVSL 332 (537)
Q Consensus 276 ~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll-~~~~~~isf~~~~~~~~pp~lv~l 332 (537)
+|... ...+..+.++|-...|+| .|++ ..+..+.+..|..|...||.++.+
T Consensus 336 dpv~~----gi~~~i~~~iG~~tpPv~--~~l~v~~gia~v~~~~i~k~~~~p~~~~~ 387 (388)
T TIGR00771 336 THVNL----GMPMAIAGALGRTASPIA--GVVVVCAGLAMVSPFEVVKRTAPPMIVGV 387 (388)
T ss_pred CHHHH----HHHHHHHHHHhCcCCcHH--HHHHHHHhhcCCCHHHHHHHHHHHHHHhc
Confidence 65443 456667777888888998 4444 444568999999999999988753
No 85
>COG1288 Predicted membrane protein [Function unknown]
Probab=97.74 E-value=0.00092 Score=71.06 Aligned_cols=314 Identities=15% Similarity=0.121 Sum_probs=142.2
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhc---CCchHHHHHHHHHHHHHHh-h-ccchhHH--HHHHHHHHHhC-CCh
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSS-I-LDNLTST--IVMVSLLRKLV-PPS 278 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~-f-l~N~ta~--~im~PI~~~l~-~p~ 278 (537)
+++++++-.=-....++|||-+|.--+.++| ++...+...++.+-.+... + +.+-+.. .+++|++.+++ |+-
T Consensus 98 ~Ii~FiLviGG~~GIvnkTGaid~Gi~ali~k~kG~e~llI~~l~ilFslgGt~~Gm~EEaiaFypIliPv~ialGyDsi 177 (481)
T COG1288 98 DIIFFILVIGGAFGIVNKTGAIDAGIAALIRKTKGKEFLLIPVLFILFSLGGTVFGMGEEAIAFYPILIPLMVALGYDSI 177 (481)
T ss_pred ceeeehhhhcceeeeeeccchHHHHHHHHhhhcCCCeEEEeeHHHHHHHhccccccchHHHHHHHHHHHHHHHHhCCchH
Confidence 3444443333344678999999998887764 3444444443333333333 3 2333333 67889998873 432
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHh-cccCChHHHHHHhhHHHHHHHHHHHHHHHhh-ccccCCCcCC----
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI-HGQISTLPTMKSLFIPSAVSLAVPLAFLSLT-SEVNGKGQES---- 352 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~-~~~~~~~~~~---- 352 (537)
. .+++.+-+.-.|.++-+=||-...+++ ..++++.|=+..-....++..+..+.+.|+| +|.|++++..
T Consensus 178 ~-----~va~i~lgt~iG~~~St~NPF~~~IAq~iAGip~~sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~~S~v~~ 252 (481)
T COG1288 178 T-----GVAIIYIGTQIGFAASTMNPFATVIAQNIAGIPFLSGMGLRIVVWVVFTLISIIYVYWYASKVKKDPTLSLVYE 252 (481)
T ss_pred H-----HHHHHHHHhccchhhhhcCchHHHHHhhhcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Confidence 1 234444444334444444554444433 4577776633233333344445555566665 5555443211
Q ss_pred --ccc------ccc--ccCCchhHHHHHHHHHHH-HHHHHHh-hhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCH
Q 045863 353 --SNV------LAS--EQMAPRGQLVFAVGIGAL-IFVPVFK-ALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKV 420 (537)
Q Consensus 353 --~~l------~~~--~~i~~~~~~~~~l~l~~l-ill~i~~-~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~ 420 (537)
+|. ++. .+.+.+++.++.++.+.. ++.|-.. .-+-.+.-...+++.+++..+-. .++.
T Consensus 253 ~~~e~r~~f~~~~~~~~~Ft~~~klvL~lf~l~f~~mI~GV~~~GW~f~eiA~~Fl~mgIiig~I~----------glse 322 (481)
T COG1288 253 DDEEFRETFKVEDSGERPFTFRDKLVLLLFTLTFVIMIWGVIVLGWWFPEIAAQFLAMGIIIGLIG----------GLSE 322 (481)
T ss_pred chHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHHhhhhceehHHHHHHHHHHHHHHHHHh----------ccch
Confidence 111 111 234456666655543332 2223111 11223433333444433222211 1233
Q ss_pred HHHhhcCChHHHHHHHHHHHHHHH------HHHhcHHHHHHHHHHhhhhhh------HHHHHHHHHHHHhH-chHHHHHH
Q 045863 421 PQALSRIDTQGALFFLGILLSVSS------LEAAGLLREIANYLDAHISNI------DLIASAIGVVSAVI-DNVPLVAA 487 (537)
Q Consensus 421 ~~~l~~v~W~tLl~f~glf~l~~~------L~~tG~~~~la~~l~~~i~~~------~~i~~i~~~lS~~i-sNtp~va~ 487 (537)
+|..+..-=+.-=+.++-+.++-+ +++.=+.|-+-+...+.+.+. +..+++-.+++-++ |..-.+.+
T Consensus 323 ~~~~~sF~~Ga~~lv~~aLiiGiARgI~lim~~g~i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~l 402 (481)
T COG1288 323 NDIASSFIEGASDLLGVALIIGLARGINLIMDDGMILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVL 402 (481)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHhhhceEEEecCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHh
Confidence 444332111111122233322222 444444555555554444221 12344445555444 33445566
Q ss_pred HHhhhh----ccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCcccC
Q 045863 488 TMGMYD----LTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDFF 537 (537)
Q Consensus 488 llpv~~----~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f~ 537 (537)
.+|+.+ ..+.+ ......+.-+|.++.-.++|-+ +.=+...+.+|++|+
T Consensus 403 tMPImAPLaD~vgv~-RqvvV~Afq~g~G~~n~I~PTS-g~~ma~La~~~i~y~ 454 (481)
T COG1288 403 TMPIMAPLADLVGVP-RQVVVLAFQLGDGFSNIIAPTS-GLLMATLAMARVPYG 454 (481)
T ss_pred hchhhhhhHHhcCCC-HHHhhhhhhhcchhhheecCch-HHHHHHHHHccCChh
Confidence 677763 23444 3344455566666665567763 222333445566653
No 86
>TIGR00819 ydaH p-Aminobenzoyl-glutamate transporter family. The p-Aminobenzoyl-glutamate transporter family includes two transporters, the AbgT (YdaH) protein of E. coli and MtrF of Neisseria gonorrhoea. AbgT is apparently cryptic in wild type cells, but when expressed on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs. p-Aminobenzoate is a constituent of and a precursor for the biosynthesis of folic acid.
Probab=97.73 E-value=0.026 Score=62.23 Aligned_cols=102 Identities=12% Similarity=0.088 Sum_probs=62.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHhCCCh
Q 045863 203 AEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKLVPPS 278 (537)
Q Consensus 203 s~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l~~p~ 278 (537)
.++.+..+.++. |+=....||||+++..-++..++.+++....+.+...++|...+.... .++.|+. +++++ +
T Consensus 82 ~~f~pLg~vlv~-mlGvGvae~tG~i~a~i~~~v~~~p~~~~t~ivv~~gv~s~~asdaG~-vvl~PL~a~if~a~Gr-~ 158 (513)
T TIGR00819 82 SGFAPLGAILAL-LLGAGIAEKSGLIPALMRKLASHSNAKLASFMVLFIAFFSHIASDAAL-VILIPLGALIFHALGR-H 158 (513)
T ss_pred hcCccHHHHHHH-HHHHHHHHHhcHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHcCC-C
Confidence 334444444333 333888899999999999998877777777777777777776644444 6677875 34432 2
Q ss_pred hHHHHHHHHHHHHHhhccccc-cccchhhhhhH
Q 045863 279 EYRKLLGAVVVIAANAGGAWT-PIGDVTTTMLW 310 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~T-piG~~~Nll~~ 310 (537)
+. ..+.++|++..+|... ++=++.|.+..
T Consensus 159 Pl---aGia~~fagvs~GFsAnl~~~~~Dpll~ 188 (513)
T TIGR00819 159 PL---AGLAAAFAGVGCGFSANLFIGTIDPLLA 188 (513)
T ss_pred hH---HHHHHHHHHHhhhhhcccccccccHHHH
Confidence 33 2456777777665532 22234555443
No 87
>COG1593 DctQ TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.0075 Score=63.69 Aligned_cols=244 Identities=17% Similarity=0.171 Sum_probs=149.4
Q ss_pred CChhhhhhccCCCCCCCCCcccccCCch---hhhcccccchhhHHH----HHHHHHHHHhhhhh------ccCchh--hH
Q 045863 79 NNQKQFQELESSSGTCDPLCSLDETSSS---DFEANYQPKTDLLKA----LAVFAAAITGAVAI------NHSWVA--AN 143 (537)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~------~~~p~g--~~ 143 (537)
-++.....++-.++.|.|+-+- |.. +..+......++..+ .....++++...++ .|..+. ..
T Consensus 85 Y~~~~aa~l~a~s~~ig~lIPP---Si~~IIyg~~a~~SI~~LF~aGi~PGlLl~~~lm~~~~~~a~~~~~~~~~~~s~~ 161 (379)
T COG1593 85 YPAAFAAALTAASGIIGPLIPP---SIPFIIYGVAAGVSIGKLFVAGIVPGLLLTLALMVVAYIVARKRGYPREERASFK 161 (379)
T ss_pred CCHHHHHHHHHhhccccccCCC---CchHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCHH
Confidence 3445556778889999998765 322 344444444444333 11122222211222 221111 11
Q ss_pred -------HHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHh-c-CCCCHHHHHHHhhhhhccchhHHHHHHH
Q 045863 144 -------QDLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRS-I-GAPSTEIAVSELSRASAEVSEIVFFLLG 214 (537)
Q Consensus 144 -------~~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gv-i-~~~~~~~a~~~~~~~ls~~~~~I~li~g 214 (537)
++...+.+-++-+.++.... .-..-.+-+++....+.+. + .+.+.++.++.+.+.......+.+++.+
T Consensus 162 e~~~~~~~a~~aLllpvIIigGi~~G~---fTpTEaa~iav~yal~v~~~vYr~l~~~~l~~~l~~a~~~t~~Vm~iva~ 238 (379)
T COG1593 162 ERLKAAVKALWALLLPVIIIGGIRSGI---FTPTEAAAIAVLYALLVGAFVYRELTLKELPKVLLEAVKTTAVVMFIVAA 238 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc---ccHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24444555555555555554 3334444444443333331 1 1125666666555555555578888999
Q ss_pred HHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHh-CCChhHHHHHHHH
Q 045863 215 AMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKL-VPPSEYRKLLGAV 287 (537)
Q Consensus 215 ~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l-~~p~~~~~~~l~~ 287 (537)
+..++..+...|+-+.+++++.. .|+..++..+.++-.++-+|+|..++..++.|+. ++. +||-++ .+.
T Consensus 239 a~~f~~~lt~~~vp~~la~~~~~~~~~~~~~ll~inl~llvvG~fmd~~a~ilil~Pil~Pi~~~~GIDPvhf----Gvv 314 (379)
T COG1593 239 AAAFAWLLTVEQVPQQLADWLLSLSDSPLVVLLVINLLLLVVGTFMDLTAAILILTPILLPIAAALGIDPVHF----GVV 314 (379)
T ss_pred HHHHHHHHHHhccHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhCCCceee----HHH
Confidence 99999999999999999999965 5788889999999999999999999998877664 555 577665 234
Q ss_pred HHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHH
Q 045863 288 VVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 288 va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~ 333 (537)
..+..++|...=|+|..-+ ++....+.+..+..+...|..+..++
T Consensus 315 ~v~Nl~IGliTPPvG~~Lf-v~s~V~~~~~~~~~k~i~Pfl~~~~~ 359 (379)
T COG1593 315 FVLNLSIGLITPPVGMVLF-VASAVGKVPIEAVIKAILPFLVALIL 359 (379)
T ss_pred HHHHHHhhCCCCCcchhHH-HHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 4555566766667994433 23345689999988877766554433
No 88
>PRK11339 abgT putative aminobenzoyl-glutamate transporter; Provisional
Probab=97.63 E-value=0.082 Score=58.18 Aligned_cols=86 Identities=10% Similarity=0.054 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHH----HhCCChhHHH
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLR----KLVPPSEYRK 282 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~----~l~~p~~~~~ 282 (537)
+.+-+++.+|+=....||||+++..-++..++.+++....+.+...+.|...++... .++.|+.- ++++ ++.
T Consensus 89 ~pLG~vlv~mlgvgvae~sG~i~a~i~~~v~~~p~~~it~ivvf~gv~s~~asdaGy-Vvl~PL~a~if~a~Gr-~Pl-- 164 (508)
T PRK11339 89 APLGAILALVLGAGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAAL-VIMPPMGALIFLAVGR-HPV-- 164 (508)
T ss_pred CcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHcCC-ChH--
Confidence 566677777788888899999999999998877777776666666777766644444 66778753 3332 233
Q ss_pred HHHHHHHHHHhhccc
Q 045863 283 LLGAVVVIAANAGGA 297 (537)
Q Consensus 283 ~~l~~va~aan~Gg~ 297 (537)
..+.++|++..||.
T Consensus 165 -aGia~~fagvs~Gf 178 (508)
T PRK11339 165 -AGLLAAIAGVGCGF 178 (508)
T ss_pred -HHHHHHHHHHHhhh
Confidence 13566676666544
No 89
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=97.54 E-value=0.001 Score=72.21 Aligned_cols=110 Identities=12% Similarity=0.105 Sum_probs=81.2
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhh-----HHHHHHHHHHHHhHchHHHHHHHHhhhh----ccC
Q 045863 426 RIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNI-----DLIASAIGVVSAVIDNVPLVAATMGMYD----LTS 496 (537)
Q Consensus 426 ~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~-----~~i~~i~~~lS~~isNtp~va~llpv~~----~~~ 496 (537)
+++|++++++.+...+.+.+++||..|++++...+..... ..+.++..++|.+.+|...+.++.|+.. ..+
T Consensus 45 ~~~~~vi~~Il~vg~~~~vl~~TGaid~~~~~~~k~~~~~~~~~~lli~i~~~lfs~~~~~~~~~i~~~PI~i~ia~~lG 124 (433)
T PRK09412 45 SIPIDVILIIMAVIAAIAAMQAAGGLDYLVKLAEKILRKNPKYITFLAPIVTYLFTFLAGTGHIAFSTLPVIAEVAKEQG 124 (433)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHcC
Confidence 4999999999999999999999999999998666655331 1345566777777777666677888872 234
Q ss_pred CCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhc--Cccc
Q 045863 497 FPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGME--KVDF 536 (537)
Q Consensus 497 ~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~--~~~f 536 (537)
.. +........+++++|+..||++..++.+.-..+ +++|
T Consensus 125 ~d-~~~~l~~~~~~a~iG~~aspin~~tv~ia~~ia~~gi~f 165 (433)
T PRK09412 125 IR-PSRPLSIAVVASQIAITASPISAAVVAMSSVLEPLGVSY 165 (433)
T ss_pred CC-CcchHHHHHHHHHHhcccCCccHHHHHHHHHHhcCCCCH
Confidence 44 323344667899999999999988777765545 5544
No 90
>PF06808 DctM: DctM-like transporters; InterPro: IPR010656 This domain represents a conserved region located towards the N terminus of the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers [, ]. Note that many family members are hypothetical proteins.
Probab=97.51 E-value=0.008 Score=65.04 Aligned_cols=180 Identities=16% Similarity=0.207 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHhc--CCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH
Q 045863 145 DLAMALLFGIGYTGIIFEESLAFNKSGVGLLMAVSLWIVRSI--GAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIV 222 (537)
Q Consensus 145 ~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi--~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l 222 (537)
++..+.+.+..+..+.... ......+..++....+.+.. ...+.++.++.+.+.......+.+++.++.+++..+
T Consensus 216 ~~~~l~~p~iil~~i~~g~---~t~teaa~~~~~~~l~i~~~~~~~~~~~~l~~~l~~~~~~~~~i~~iia~a~~~~~~l 292 (416)
T PF06808_consen 216 AIPALLIPVIILGGIYLGI---FTPTEAAAVAVVYALVIGLFVYRRLSWKDLWRALVETARTTGMILFIIAAAGIFSWVL 292 (416)
T ss_pred cchHHHHHHHHHHHhhhcc---cchhhhhhhhHHHHHHHHHhhhcccChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4446666666666666655 33333333333322222221 122566666666555445558889999999999999
Q ss_pred HHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHh-CCChhHHHHHHHHHHHHHhhc
Q 045863 223 DAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKL-VPPSEYRKLLGAVVVIAANAG 295 (537)
Q Consensus 223 ~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l-~~p~~~~~~~l~~va~aan~G 295 (537)
..+|+.+.++.++.. .++...+..+.++..++.+++|..++..+..|+. .++ .||-.. .+.+.+.+.+|
T Consensus 293 ~~~g~~~~i~~~i~~l~~~~~~~l~l~~l~~lilG~~m~~~a~~ii~~pi~~P~~~~~Gidpi~~----g~~~~~~~~ig 368 (416)
T PF06808_consen 293 TLTGVPQAIAEFILSLSGSPWLVLLLIMLILLILGMFMDTTAAIIIVAPILAPIAQALGIDPIHF----GVFMFYNAEIG 368 (416)
T ss_pred HHcCccHHHHHHHHhcCcchHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhCcchhhH----HHHHHHHHHhc
Confidence 999999999999964 4556678888889999999999999998877665 455 465443 35566676776
Q ss_pred cccccccchhhhhhHh-cccCChHHHHHHhhHHHHHHHH
Q 045863 296 GAWTPIGDVTTTMLWI-HGQISTLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 296 g~~TpiG~~~Nll~~~-~~~isf~~~~~~~~pp~lv~l~ 333 (537)
..-=|+| .|..+.. ..+.+..+-++...|..++...
T Consensus 369 ~iTPPvg--l~lfva~~ia~~~~~~i~~~~~Pf~~~~~~ 405 (416)
T PF06808_consen 369 LITPPVG--LNLFVAAGIAGVPMEKIFRGILPFIFVLLV 405 (416)
T ss_pred CCCCCcc--HHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 5444677 4445444 4588888988877776665444
No 91
>COG4664 FcbT3 TRAP-type mannitol/chloroaromatic compound transport system, large permease component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.43 E-value=0.088 Score=54.62 Aligned_cols=277 Identities=12% Similarity=0.061 Sum_probs=140.6
Q ss_pred HHHHHHHHHhChHHHHHHHH---hcCCchHHHHHHHHHHHHHHhhccchhHHHH-----HHHHHHHhCCChhHHHHHHHH
Q 045863 216 MTIVEIVDAHQGFKLVTDNI---TTRKPRTLLWVIGFVTFFLSSILDNLTSTIV-----MVSLLRKLVPPSEYRKLLGAV 287 (537)
Q Consensus 216 ~ii~~~l~~tGl~~ria~~l---~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~i-----m~PI~~~l~~p~~~~~~~l~~ 287 (537)
..++..+||+|+.|++=+.+ .++-+-.+.+.+.++.+++++-+.-+++..+ -.|++.|..-+++. . +
T Consensus 74 ~fMG~vlErsglae~ll~tig~lfg~v~gglA~avi~VgallaatTGvVaAsVvaMGlISlpiMLryGYd~~l----A-s 148 (447)
T COG4664 74 TFMGLVLERSGLAEDLLETIGQLFGPVRGGLAYAVIIVGALLAATTGVVAASVVAMGLISLPIMLRYGYDRKL----A-S 148 (447)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHhCCCCCchhhHHHHHHHHHHHhhchHHHHHHHhhhhcchHHHHhCCCccc----c-c
Confidence 34566789999999988765 3344446788888899999888776666633 24777666322221 1 1
Q ss_pred HHHHHhhccccccccchhhhh---hHhcccCChHHHHHHhhHHHHHHHH--HHHHHH-HhhccccCCCcCCccccccccC
Q 045863 288 VVIAANAGGAWTPIGDVTTTM---LWIHGQISTLPTMKSLFIPSAVSLA--VPLAFL-SLTSEVNGKGQESSNVLASEQM 361 (537)
Q Consensus 288 va~aan~Gg~~TpiG~~~Nll---~~~~~~isf~~~~~~~~pp~lv~l~--v~~~ll-~~~~~~~~~~~~~~~l~~~~~i 361 (537)
-.++| +|...-+ -||.++ .++..+.|-.|..+....|++.... +.+++. .+.||.. .+.-+.|.++.+.
T Consensus 149 GvIaA--sGTLgqi-IPPSlvLIVladqlG~SVgdly~gal~PGl~l~~~y~~yili~a~l~P~~-aPaLP~ear~~~~- 223 (447)
T COG4664 149 GVIAA--SGTLGQI-IPPSLVLIVLADQLGRSVGDLYAGALIPGLMLVGLYALYILIMAILRPKS-APALPLEARTLGG- 223 (447)
T ss_pred eeEec--Cceeeee-cCcceeeeeeHHhhCCcHHHHHHHhhhhhHHHHHHHHHHHHHHHHhCccc-CCCCCHHHhhccc-
Confidence 11111 2222222 144433 3556789999988777778765432 222211 1223211 1111111111111
Q ss_pred Cch---hHHHHHH----HHHHHHHHHHHhhhcCC--C--hHHHHHHHHHHHHHHhhhccccchhhccCCHHHH---hh--
Q 045863 362 APR---GQLVFAV----GIGALIFVPVFKALTGL--P--PYMGILLGLGVLWILTDAIHYGESERQKLKVPQA---LS-- 425 (537)
Q Consensus 362 ~~~---~~~~~~l----~l~~lill~i~~~~~gi--~--~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~---l~-- 425 (537)
+++ ++.+..+ ++..+++.-+ .+|+ | ...+...|+.++...+ ++++|+.. ..
T Consensus 224 ~~~~l~~~vv~~~iPplvLi~lVLGtI---f~GiaTpTE~gA~G~~GA~~LA~~~----------~~l~w~~~~~a~~~T 290 (447)
T COG4664 224 SGRQLVKRVVQSLIPPLVLIFLVLGTI---FFGIATPTEGGAVGAVGALLLALAN----------GRLNWQMVKQALDAT 290 (447)
T ss_pred cHHHHHHHHHHHhcchHHHHHHHHHHH---HhcccCCcccchhhHHHHHHHHHHh----------CcccHHHHHHHHHHH
Confidence 111 1122221 1111112212 2343 2 2223333444443333 34677633 32
Q ss_pred -cCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH----HHHHHHHHHHHhHchHHHHHHHHhhhh--ccCCC
Q 045863 426 -RIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID----LIASAIGVVSAVIDNVPLVAATMGMYD--LTSFP 498 (537)
Q Consensus 426 -~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~----~i~~i~~~lS~~isNtp~va~llpv~~--~~~~~ 498 (537)
|+.=-+++.+.|--...-.....|--.|+-+++.+..++.+ ....+.+++.-|+|-.=.+.+..|+++ ....+
T Consensus 291 ~k~tsmV~~IllGa~~FSlvF~g~~G~~~ve~~l~~lpgg~igFli~~~~~iF~LgffldffEiafIivPllaPva~~lg 370 (447)
T COG4664 291 AKLTSMVLFILLGATVFSLVFYGLNGHAWVEHLLTNLPGGEIGFLIVSNILIFFLGFFLDFFEIAFIIVPLLAPVADKLG 370 (447)
T ss_pred HHHHHHHHHHHHhhHHHHhheeecCchHHHHHHHhcCCCCceeeehHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcC
Confidence 22222334444444444445666667788887777655543 224555777777777777777778773 23333
Q ss_pred CChHHHHHHHHHHHHhhh
Q 045863 499 QDSKFWQLIAYCAGTGGS 516 (537)
Q Consensus 499 ~~~~~~laLa~~a~iGg~ 516 (537)
.+ ..|+.+..+.|+=.+
T Consensus 371 ID-liwfGVll~~NlQtS 387 (447)
T COG4664 371 ID-LIWFGVLLGVNLQTS 387 (447)
T ss_pred Cc-HHHHHHHHHHhhhhh
Confidence 33 678888888886444
No 92
>PF03553 Na_H_antiporter: Na+/H+ antiporter family; InterPro: IPR018461 A single member of the NhaC family, a protein from Bacillus firmus, has been functionally characterised. It is involved in pH homeostasis and sodium extrusion. Members of the NhaC family are found in both Gram-negative bacteria and Gram-positive bacteria.; GO: 0015385 sodium:hydrogen antiporter activity, 0006814 sodium ion transport, 0006885 regulation of pH, 0016021 integral to membrane
Probab=97.40 E-value=0.012 Score=60.39 Aligned_cols=114 Identities=16% Similarity=0.199 Sum_probs=80.9
Q ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhc-cchhHHHHH
Q 045863 191 TEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSIL-DNLTSTIVM 267 (537)
Q Consensus 191 ~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl-~N~ta~~im 267 (537)
.+|..+.+.++.++..+++++++.++.++..++++|..+.+..++.+ ++++.+...+++++.+++..+ ++..+.+++
T Consensus 146 ~~~~~~~~~~G~~~m~~~i~i~ila~~l~~i~~~~G~~~~~v~~~~~~~~~~~~l~~~~~l~~~~~~~~tgs~~~ti~i~ 225 (303)
T PF03553_consen 146 FSEVDGLLIRGIKSMLPTIIILILAGALGGILEKTGVLDALVNKLLKKIKSPRSLPAVTFLLSIIISFATGSSWGTIAIM 225 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34444445555566668999999999999999999988888887765 467777788888888888887 555555777
Q ss_pred HHHHHHh----C-CChhHHHHHHHHHHHHHhhccccccccchhhhh
Q 045863 268 VSLLRKL----V-PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTM 308 (537)
Q Consensus 268 ~PI~~~l----~-~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll 308 (537)
.|+++.+ . ++... .-.+.-++..|..+.|+++.+-..
T Consensus 226 ~pi~~~l~~~~g~~~~~~----a~ai~~~~~~g~~l~P~s~~~i~~ 267 (303)
T PF03553_consen 226 GPIFKPLAEKMGISPPLL----AGAIESGATFGDPLSPWSDTTILS 267 (303)
T ss_pred HHHHHHHHHHhcccHHHH----HHHHHhhhhhcCCCCcchHHHHHH
Confidence 8887655 2 22111 223444555688899999866543
No 93
>TIGR00770 Dcu anaerobic c4-dicarboxylate membrane transporter family protein. These proteins are members of th C4-Dicarboxylate Uptake (Dcu) Family (TC 2.A.13). Most proteins in this family have 12 GES predicted transmembrane regions; however one member has 10 experimentally determined transmembrane regions with both the N- and C-termini localized to the periplasm. The two Escherichia coli proteins, DcuA and DcuB, transport aspartate, malate, fumarate and succinate, and function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively.
Probab=97.23 E-value=0.0047 Score=67.04 Aligned_cols=103 Identities=12% Similarity=0.105 Sum_probs=78.9
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhh-----HHHHHHHHHHHHhHchHHHHHHHHhhhh----cc
Q 045863 425 SRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNI-----DLIASAIGVVSAVIDNVPLVAATMGMYD----LT 495 (537)
Q Consensus 425 ~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~-----~~i~~i~~~lS~~isNtp~va~llpv~~----~~ 495 (537)
.++||++++++.++....+.+++||..|++.+.+.+..... ..+.++..+.|.+.+|.-.+.++.|+.. ..
T Consensus 40 ~~~~~~vI~~il~vgg~~~vl~~TGaid~~v~~~~k~~~~~~~~~~llipii~~lfs~~~g~~~~~l~f~PI~i~la~~l 119 (430)
T TIGR00770 40 GKIPFDVILIIMAVIAAIAAMQAAGGLDYLVQIAEKLLRRNPKYITILAPSVTYFLTILAGTGHVVYSTLPVIAEVAKEQ 119 (430)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCCcchhhhhHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHh
Confidence 46999999999999999999999999999998777655331 2345677888888899877778888863 23
Q ss_pred CCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHH
Q 045863 496 SFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAF 528 (537)
Q Consensus 496 ~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~ 528 (537)
+.. +........+++++|+..||++.+.|.+.
T Consensus 120 G~d-~i~~~ai~~~aa~iG~~as~in~~~~~~i 151 (430)
T TIGR00770 120 GIK-PERPLSLAVVSSQIAITASPVSAAVVFMS 151 (430)
T ss_pred CCC-ChhHHHHHHHHHHHHHHhhcccHHHHHHH
Confidence 443 33344567899999999999987655544
No 94
>TIGR00795 lctP L-lactate transport. The only characterized member of this family, from E. coli, appears to catalyze lactate:H+ uptake. Members of this family have 12 probable TMS.
Probab=97.22 E-value=0.55 Score=52.48 Aligned_cols=71 Identities=15% Similarity=0.325 Sum_probs=50.9
Q ss_pred chhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC--CchHHHHHHHHHHHHHHhhccc----hhHHHHHHHHHHHh-CCC
Q 045863 205 VSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR--KPRTLLWVIGFVTFFLSSILDN----LTSTIVMVSLLRKL-VPP 277 (537)
Q Consensus 205 ~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~--~~~~l~~~l~l~~~~lS~fl~N----~ta~~im~PI~~~l-~~p 277 (537)
..++.+.+++++.+.+-++++|-+|++.+.+.+- +.| ....+++....+|+.. -+.+++-.|+...+ .+|
T Consensus 68 ~~~I~~II~~Ai~ly~~~~~sGa~~~I~~~l~~is~D~r---vq~llI~~~Fg~flEg~aGFGtpvAI~aplLv~LGf~P 144 (530)
T TIGR00795 68 LWPIAWIIIAAIFLYKLSVKSGAFEIIRSSILSISPDRR---IQVLLIGFCFGAFLEGAAGFGTPVAITAAILVGLGFKP 144 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhcCCcHH---HHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHcCCCh
Confidence 4488999999999999999999999999999653 333 2233344555666554 45567778888777 354
Q ss_pred h
Q 045863 278 S 278 (537)
Q Consensus 278 ~ 278 (537)
-
T Consensus 145 l 145 (530)
T TIGR00795 145 L 145 (530)
T ss_pred H
Confidence 3
No 95
>PF07158 MatC_N: Dicarboxylate carrier protein MatC N-terminus; InterPro: IPR009827 This entry represents the N-terminal region of the bacterial dicarboxylate carrier protein MatC. The MatC protein is an integral membrane protein that could function as a malonate carrier [].
Probab=97.21 E-value=0.015 Score=53.84 Aligned_cols=101 Identities=12% Similarity=0.028 Sum_probs=75.2
Q ss_pred HhhhcCCChHHHHHHHHHHHHHHhhhccccchhhccCCHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhh
Q 045863 382 FKALTGLPPYMGILLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAH 461 (537)
Q Consensus 382 ~~~~~gi~~~~valiga~lLll~~~vl~~~~~~~~~i~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~ 461 (537)
++-..++|....++..+.++-..- -.++.||.++..||++.+...|.-.+-+..++.|-+|+++++....
T Consensus 17 ig~~~kiNiGllAi~~A~vig~~~----------~g~~~~~ii~gfP~~lf~~l~GVt~lf~iA~~NGTle~la~~~v~~ 86 (149)
T PF07158_consen 17 IGFVRKINIGLLAIAFAFVIGTFL----------AGMSDKEIIAGFPTSLFITLVGVTLLFGIAQVNGTLELLAKKAVRL 86 (149)
T ss_pred HHHccccchHHHHHHHHHHHHHHH----------cCCCHHHHHhhCCHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 444567888877766553322110 0247799999999999999999999999999999999999999998
Q ss_pred hhhh-----HHHHHHHHHHHHhHc-hHHHHHHHHhhh
Q 045863 462 ISNI-----DLIASAIGVVSAVID-NVPLVAATMGMY 492 (537)
Q Consensus 462 i~~~-----~~i~~i~~~lS~~is-Ntp~va~llpv~ 492 (537)
.++. +.++.+++++|++=. +.+..+.+.|+.
T Consensus 87 ~~~r~~liP~v~f~~~~~lsa~G~g~~~~~Ai~aPia 123 (149)
T PF07158_consen 87 VGGRPALIPWVMFLLAAVLSAIGAGSIAAVAIMAPIA 123 (149)
T ss_pred cCCCceehHHHHHHHHHHHHHhCCChHHHHHHHHHHH
Confidence 8643 345777788887754 455566666765
No 96
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=97.16 E-value=0.016 Score=63.57 Aligned_cols=146 Identities=10% Similarity=0.093 Sum_probs=90.5
Q ss_pred CHHHHHHHhhhhhccc---hhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc-CCchHHHHHHHHHHHHHHhhcc-chhHH
Q 045863 190 STEIAVSELSRASAEV---SEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT-RKPRTLLWVIGFVTFFLSSILD-NLTST 264 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~---~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~-~~~~~l~~~l~l~~~~lS~fl~-N~ta~ 264 (537)
+++|..+.|-++.++. ..++.+..+.-++.+.....|..........+ .+.......+++...+++-+++ .++..
T Consensus 306 ~~~~~~~~F~~G~~~~~~~a~vVgla~ai~v~~~~~~i~~tI~~~~~~~l~~~~~~~~~~~m~~~~~~~~fli~SGsg~a 385 (465)
T PF03606_consen 306 SPNEIVKAFFKGMGDMLSFALVVGLARAISVFMEGGKIIDTIVHLLSNLLSGLPGVIAAIGMFLIQFLINFLIGSGSGQA 385 (465)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHeeecCCchHHH
Confidence 5666666665544443 36667777777776666666655554444443 3444445666667778887874 44444
Q ss_pred HHHHHHH----HHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 265 IVMVSLL----RKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 265 ~im~PI~----~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
..+.|++ +.++-++.. ..++.-++++.+=..+|+.... +...+..++++.+|+|...||.++.+++..+.+
T Consensus 386 ~~~mpim~plad~~Gi~~q~---~vla~q~g~gl~n~isPtsg~~-m~~l~ia~V~~~~w~K~~~~~~~~~~v~~~v~l 460 (465)
T PF03606_consen 386 AAFMPIMPPLADLLGITRQT---AVLAFQFGDGLGNSISPTSGVL-MAVLGIAKVSYGKWVKRTWPPMLIWFVLSIVFL 460 (465)
T ss_pred HHHHHhHHHHHHHcCCCHHH---HHHHHHHHHHHHhhccchHHHH-HHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666665 333322222 2456777888877788874322 123345699999999999999988777665544
No 97
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=97.09 E-value=0.097 Score=59.36 Aligned_cols=144 Identities=15% Similarity=0.111 Sum_probs=103.4
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc---CCchHHHHHHHHHHHHHHhhccchhHHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT---RKPRTLLWVIGFVTFFLSSILDNLTSTIV 266 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~---~~~~~l~~~l~l~~~~lS~fl~N~ta~~i 266 (537)
+.++..+.+.+.......+.+.+.++.+++..+..+|+.++++..+.. +++...+..+.++..++.+++|.+++..+
T Consensus 375 ~~~~l~~~l~~~a~~~~~I~~iia~a~i~~~~lt~tGl~~~l~~~i~~l~~~~~~~~Lll~~l~~lilGm~l~~~a~~ii 454 (613)
T TIGR02123 375 GLGEIFGALEDGARNAVPVAAACAGAGIIIGVVTLTGLGLKISNDLLDLAGGNLFLLLILTMIACIILGMGLPTTANYII 454 (613)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 556666655554444458889999999999999999999999999854 36777788888899999999999999977
Q ss_pred HHHHH----HHh-CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHh-cccCChHHHHHHhhHHHHHHHHHHHHHH
Q 045863 267 MVSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI-HGQISTLPTMKSLFIPSAVSLAVPLAFL 339 (537)
Q Consensus 267 m~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-~~~isf~~~~~~~~pp~lv~l~v~~~ll 339 (537)
+.|+. .++ .+|-.. .+.+.+.+.+|...=|+|- |..+.. ..+.++.+-.+...|..+..++++..+.
T Consensus 455 ~~pi~~P~l~~lGidpi~~----~~~v~~~~~ig~iTPPvgl--~lfvaa~Ia~~~~~~~~~~~~p~~~~~~~~~~l~~ 527 (613)
T TIGR02123 455 TATLAAPALIALGVPPIAA----HMFVFYFGILADITPPVAL--AAFAAAGIAGADPMKTGFEAFKLALAGYLVPFMFV 527 (613)
T ss_pred HHHHHHHHHHHcCCCHHHH----HHHHHHHHHHHcCCCCchH--HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76654 555 455433 3445555555543335663 444443 4578888888888888887777666533
No 98
>PRK11588 hypothetical protein; Provisional
Probab=96.87 E-value=0.16 Score=56.05 Aligned_cols=146 Identities=5% Similarity=0.001 Sum_probs=85.3
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHH-----HHhChHHHHHHHHh---c-CCchHHHHHHHHHHHHHHhhccc
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIV-----DAHQGFKLVTDNIT---T-RKPRTLLWVIGFVTFFLSSILDN 260 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l-----~~tGl~~ria~~l~---~-~~~~~l~~~l~l~~~~lS~fl~N 260 (537)
+++|..+.+.++.++.....+++.-+=-+...+ ++-...|.+-+.+. + -++......++++..++.-|+++
T Consensus 338 ~~~~i~~~f~~Ga~~m~~~aliig~A~~i~~il~~g~~~~g~iidTIv~~~~~~L~~lp~~~~ai~m~i~~~~lNffIpS 417 (506)
T PRK11588 338 TVNTMASSFTEGARMMLAPALLVGFAKGILLLLGGGEPGDPSVLNTILNSAGGAISGLPDAVSAWFMLLFQSVFNFFVTS 417 (506)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccchHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHeEecC
Confidence 677887777776666555555555555666667 34446666665542 2 35556678888899999999976
Q ss_pred hhHH-HHHHHHH----HHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHH
Q 045863 261 LTST-IVMVSLL----RKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVP 335 (537)
Q Consensus 261 ~ta~-~im~PI~----~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~ 335 (537)
...- +++.||+ .-++-.++.. .++--++-...-..+|+.. .-+..-...+++|.+|+|+.+|..++.+++.
T Consensus 418 gSGqAaitmPIm~Plad~lGisrq~a---vlAfq~GDg~tNlI~Pts~-~lm~~Laia~Ipy~kW~Kf~~pl~~i~~v~~ 493 (506)
T PRK11588 418 GSGQAALTMPLMAPLADLVGVNRQVA---VLAFQLGDGFTNIIYPTSA-SLMATLGVCRVDFGNWLKFIWRFLLLLFIMS 493 (506)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHhHHHHHhhhhHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 5544 4455554 4443222221 1222333323333555421 1111234568999999999999887666655
Q ss_pred HHHH
Q 045863 336 LAFL 339 (537)
Q Consensus 336 ~~ll 339 (537)
.+.+
T Consensus 494 ~v~l 497 (506)
T PRK11588 494 SVVV 497 (506)
T ss_pred HHHH
Confidence 5443
No 99
>PRK09804 putative cryptic C4-dicarboxylate transporter DcuD; Provisional
Probab=96.77 E-value=0.18 Score=54.77 Aligned_cols=129 Identities=16% Similarity=0.175 Sum_probs=96.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhc-cchhHHHHHHHH----HHHh-C
Q 045863 204 EVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSIL-DNLTSTIVMVSL----LRKL-V 275 (537)
Q Consensus 204 ~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl-~N~ta~~im~PI----~~~l-~ 275 (537)
.|.+++-+++++-+++++++..|+.|.+-+...+ .........+..+.++.+..+ +.+++..-+.|+ +.++ .
T Consensus 312 ~f~~VV~LIVAA~vFa~GL~aiG~Id~Li~~~~~~g~g~~~~~lv~~~i~~l~a~l~GSGnAaffAF~~lvp~iA~~~G~ 391 (455)
T PRK09804 312 QFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALVIAICAIVMGSGNAPFMSFASLIPNIAAGLHV 391 (455)
T ss_pred HHHHHHHHHHhHHHHHhHHHHhhHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHhHHHHHHcCC
Confidence 3458999999999999999999999999988854 344555566677777777777 556655555544 4555 3
Q ss_pred CChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHH
Q 045863 276 PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 276 ~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
+|.. +.+++..++|+|=.+.|+.... +.+.+..++|-.|-.|.-.+|+++.+++..+
T Consensus 392 ~~~~----l~lpmq~as~lgRt~SPVagvi-IavAg~a~vSP~eiVKRTavPml~g~i~~~i 448 (455)
T PRK09804 392 PAVV----MIMPMHFATTLARAVSPITAVV-VVTSGIAGVSPFAVVKRTAIPMAVGFVVNMI 448 (455)
T ss_pred CHHH----HHHHHHHHHhhccccCchhhHH-hhhccccCCCHHHHHHHhHHHHHHHHHHHHH
Confidence 4433 3578999999999999986432 2345567999999999999999988775543
No 100
>TIGR00931 antiport_nhaC Na+/H+ antiporter NhaC. A single member of the NhaC family, a protein from Bacillus firmus, has been functionally characterized.It is involved in pH homeostasis and sodium extrusion. Members of the NhaC family are found in both Gram-negative bacteria and Gram-positive bacteria.
Probab=96.51 E-value=0.11 Score=57.04 Aligned_cols=110 Identities=7% Similarity=0.019 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhc-cchhHHHHHHHHHHHh-----CCCh
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSIL-DNLTSTIVMVSLLRKL-----VPPS 278 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl-~N~ta~~im~PI~~~l-----~~p~ 278 (537)
+++.+++..+.++..++++|..|.+.+++.+ ++.++..+...+.+.+++.+. ++..+..+.-|++|++ .+++
T Consensus 310 ~~i~lii~~~~lggil~~~G~l~~l~~~l~~~i~s~~~~~l~t~~~~~i~~~i~~~~~~sil~~G~~~k~~~d~~~i~r~ 389 (454)
T TIGR00931 310 WSLSLVMIALTFGGVLQRIGVLDVILQSANKKIISTWTFDCSTSTSSIGVNVVTCEQYLSILLPGKTFESFYTKLNLAKK 389 (454)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHcCCCcceehHHHHHHHHHHHHHHhhhHHHHHhHHHHHHHHHHcCCCHH
Confidence 6888999999999999999999999999865 356667777777777777665 4444445556666655 2333
Q ss_pred hHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHH
Q 045863 279 EYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTM 321 (537)
Q Consensus 279 ~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~ 321 (537)
+.. + .+--++...+.+.|++.- -.+..+..+.+..++.
T Consensus 390 ~LA--~--~ld~s~t~~~~LiPws~~-g~~~~~~lgv~~~~~i 427 (454)
T TIGR00931 390 NLS--R--TLEDAGTLVNPLIPWGVS-GAYMAGTLGVDTISYL 427 (454)
T ss_pred HHH--H--HHHhhhhhhhhHHHHHHH-HHHHHHHcCCCHHHHH
Confidence 221 1 233344445566777433 2344444566665655
No 101
>COG4666 TRAP-type uncharacterized transport system, fused permease components [General function prediction only]
Probab=96.34 E-value=0.13 Score=57.50 Aligned_cols=309 Identities=14% Similarity=0.128 Sum_probs=157.7
Q ss_pred hHHHHHHHHHHH-HHHHHHhChHHHHHHHH---hc----CCchHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHhC-C
Q 045863 207 EIVFFLLGAMTI-VEIVDAHQGFKLVTDNI---TT----RKPRTLLWVIGFVTFFLSSILDNLTST-IVMVSLLRKLV-P 276 (537)
Q Consensus 207 ~~I~li~g~~ii-~~~l~~tGl~~ria~~l---~~----~~~~~l~~~l~l~~~~lS~fl~N~ta~-~im~PI~~~l~-~ 276 (537)
..-+-++++|++ ...++|+|.+|+.-+.. .+ +..+.-...-++...+--+=..|+.++ ...+|.+||.+ +
T Consensus 186 ~Vs~~~IflFilFga~l~~~G~g~~fid~a~a~~G~~~GGpak~aVv~Sgl~G~isGSsvAN~vttG~fTIPlMkR~Gy~ 265 (642)
T COG4666 186 GVSWTFIFLFILFGAFLVKSGAGQFFIDLAFALAGLRRGGPAKVAVVSSGLMGMISGSSVANTVTTGSFTIPLMKRAGYP 265 (642)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHhcCCCCCCCcceeeecchhheecchhhhhhhhcceeeHHHHHhcCCC
Confidence 344555555554 55679999999887654 22 222222222222222222223455555 56689999984 4
Q ss_pred ChhHHHHHHHHHHHHHhhcccccc-ccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHh-hccc--cCCCcCC
Q 045863 277 PSEYRKLLGAVVVIAANAGGAWTP-IGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSL-TSEV--NGKGQES 352 (537)
Q Consensus 277 p~~~~~~~l~~va~aan~Gg~~Tp-iG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~-~~~~--~~~~~~~ 352 (537)
|+.- -++=-++..||-..| +=....-+..+..+++..|.....+.|.++...-.+...++ -+|. ++..+
T Consensus 266 ~~~A-----gAvEaaAS~GGQimPPiMGAAAFiMae~~gipY~~ii~aA~iPAllyy~~v~~~V~~eA~k~~~~gl~~-- 338 (642)
T COG4666 266 PEFA-----GAVEAAASTGGQLMPPVMGAAAFIMAEYLGIPYTEIILAAFIPALLYYFGVILMVHLEAKKDGLPGLPR-- 338 (642)
T ss_pred hhcc-----cceehhhhcCCchhhhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCh--
Confidence 4322 234445566777544 43333335566779999999999999998877655444444 1222 22111
Q ss_pred ccccccccCCc----hhHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHH-HHH--HHHhhhccccchhhcc-C---CHH
Q 045863 353 SNVLASEQMAP----RGQLVFAVGIGALIFVPVFKALTGLPPYMGILLGL-GVL--WILTDAIHYGESERQK-L---KVP 421 (537)
Q Consensus 353 ~~l~~~~~i~~----~~~~~~~l~l~~lill~i~~~~~gi~~~~valiga-~lL--ll~~~vl~~~~~~~~~-i---~~~ 421 (537)
+ +.++.++ +...++-+++ +.|++. .+.+|...++.+. .+. .+.. . .+|+.+.. . +.-
T Consensus 339 -~--~lp~~~~~l~~~~~~llPl~~----LI~~L~--~~~sp~~aa~~s~Il~~~~~~~~-~--~~k~~~~g~~~~~~l~ 406 (642)
T COG4666 339 -E--QLPPLRPTLKEGWYYLLPLVL----LIWLLG--VGYSPGRAALLSSILITALVLRA-L--FRKDTRMGKILARDLL 406 (642)
T ss_pred -h--hCCchHHHHHhhhHHHHHHHH----HHHHHH--cCcCHHHHHHHHHHHHHHHHHHH-H--hcccccchhhHHHHHH
Confidence 1 1222221 1111222111 122222 1356666666652 111 1111 1 11221111 1 122
Q ss_pred HHhh---cCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH-HHHHHHHHHHHhHc----hHHHH----HHHH
Q 045863 422 QALS---RIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID-LIASAIGVVSAVID----NVPLV----AATM 489 (537)
Q Consensus 422 ~~l~---~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~-~i~~i~~~lS~~is----Ntp~v----a~ll 489 (537)
|+++ |..-++.+-.+..-++++.++-||+...+++.+...-+++. ..+++++.+|-++. .++.. ..+.
T Consensus 407 ~aLe~gar~~i~v~ia~A~aGIIvGvitlTGlg~~~s~~l~~l~~g~l~l~L~lt~~~siiLGMGlPttanYIi~atl~a 486 (642)
T COG4666 407 EALESGARNVIPVAIACATAGIIVGVVTLTGLGLKLSSLLLDLAGGNLLLLLVLTMVISIILGMGLPTTANYIITATLAA 486 (642)
T ss_pred HHHHHhhHhHHHHHHHHHhhcceeeeEeecCchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHH
Confidence 3443 44556666666666678889999999999999988765554 34555566664332 12222 1122
Q ss_pred hhhhccCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHhhcCccc
Q 045863 490 GMYDLTSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMGMEKVDF 536 (537)
Q Consensus 490 pv~~~~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g~~~~~f 536 (537)
|.....+.+ ....=...+=-++.+.+||==+.+.....+.+|-||
T Consensus 487 P~l~~~gv~--~laaH~FVFYfGi~AdiTPPVaLaAfAaA~IA~~dp 531 (642)
T COG4666 487 PALIELGVP--LLAAHFFVFYFGIMADITPPVALAAFAAAGIAGADP 531 (642)
T ss_pred HHHHHcCch--HHHHHHHHHHHHHHccCCChHHHHHHHHhhhcCCCc
Confidence 333222222 111112233345667788777777777777777765
No 102
>PF04165 DUF401: Protein of unknown function (DUF401) ; InterPro: IPR007294 Members of this family are predicted to have 10 transmembrane regions.
Probab=96.33 E-value=0.4 Score=51.42 Aligned_cols=124 Identities=19% Similarity=0.253 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHhCCChhHHHHHH
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILD-NLTSTIVMVSLLRKLVPPSEYRKLLG 285 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~-N~ta~~im~PI~~~l~~p~~~~~~~l 285 (537)
.+++.+++.|++-+.++.||..+.++..+.+.+ .-....+.++.++....+. +.+.+++-.|+...+.+.-++
T Consensus 255 ki~~~i~~im~Fk~~l~~tG~~~~l~~~l~~~~-ip~~li~~lipFivG~~TGi~~a~vgi~fPll~~l~~~~~~----- 328 (385)
T PF04165_consen 255 KILLLIIGIMIFKEILEATGVVEELPEFLSSLG-IPPFLIIALIPFIVGLITGITQAFVGIAFPLLAPLIGGLPY----- 328 (385)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccchH-----
Confidence 899999999999999999999999999887642 2223334444444444444 455568889998877443122
Q ss_pred HHHHHHHhh-ccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHH
Q 045863 286 AVVVIAANA-GGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 286 ~~va~aan~-Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
...+|.+.. |-+.+|+ +-.=.+..++.+-++.+-.+...+|.++.+++..+
T Consensus 329 ~~la~~~g~~GvmlSP~-HlCLvlT~eYFk~~~~~v~k~l~~p~~i~~~~~~~ 380 (385)
T PF04165_consen 329 LVLAYASGFAGVMLSPV-HLCLVLTAEYFKADLGKVYKKLLPPALIFLAAGLL 380 (385)
T ss_pred HHHHHHHHHHHHhhchH-HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 346666655 4445554 23333567788999999888899998766655543
No 103
>PRK10420 L-lactate permease; Provisional
Probab=96.31 E-value=2.6 Score=47.36 Aligned_cols=73 Identities=18% Similarity=0.303 Sum_probs=50.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC--CchHHHHHHHHHHHHHHhhccch----hHHHHHHHHHHHh-CC
Q 045863 204 EVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR--KPRTLLWVIGFVTFFLSSILDNL----TSTIVMVSLLRKL-VP 276 (537)
Q Consensus 204 ~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~--~~~~l~~~l~l~~~~lS~fl~N~----ta~~im~PI~~~l-~~ 276 (537)
+.+++.|.+++++.+..-++|+|-+|+|.+.+.+- +.|. ...+++....+|+... +.+++-.|+...+ .+
T Consensus 76 ~~~pI~~II~~Ai~ly~~~~~tGa~~~I~~~l~~is~D~Rv---q~LlI~~~Fg~FlEg~AGFGtpvAI~aplLv~LGF~ 152 (551)
T PRK10420 76 GLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRL---QMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFK 152 (551)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHhcCCchhH---HHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHcCCC
Confidence 44578899999999999999999999999998653 3332 2222344455555433 4557778888777 35
Q ss_pred Chh
Q 045863 277 PSE 279 (537)
Q Consensus 277 p~~ 279 (537)
|-+
T Consensus 153 Pl~ 155 (551)
T PRK10420 153 PLY 155 (551)
T ss_pred hHH
Confidence 533
No 104
>TIGR00819 ydaH p-Aminobenzoyl-glutamate transporter family. The p-Aminobenzoyl-glutamate transporter family includes two transporters, the AbgT (YdaH) protein of E. coli and MtrF of Neisseria gonorrhoea. AbgT is apparently cryptic in wild type cells, but when expressed on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs. p-Aminobenzoate is a constituent of and a precursor for the biosynthesis of folic acid.
Probab=96.27 E-value=0.54 Score=52.08 Aligned_cols=136 Identities=7% Similarity=0.021 Sum_probs=91.7
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHh------cCCchHHHHHHHHHHHHHHhhccchhH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIT------TRKPRTLLWVIGFVTFFLSSILDNLTS 263 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~------~~~~~~l~~~l~l~~~~lS~fl~N~ta 263 (537)
+.+|..+.+.++.++..+.+++++.+--+...++++++.+.++.+.. +-+...+...+.++..++.-|+++..+
T Consensus 330 ~~~di~~~m~~g~~~m~~~~vli~~A~~f~~~f~~s~i~~~ia~~~A~~L~~~~l~~~~~~i~~~l~~~~iNlfI~S~Sg 409 (513)
T TIGR00819 330 GEADLPHAMAEPMKELAGFIVIIFFAAQFVAFFNWSNIGKFIAVGGADFLEESGLAGIPAFIGFALICAFICLFIASASA 409 (513)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHheeccHHH
Confidence 77888888888888888888888888888899999999999998762 235666788889999999999977665
Q ss_pred H-HHHHHHH----HHh-CCChhHHHHHHHHHHHHHhhccccccccchhh---hhhHh----c-ccCChHHHHHHhhHHHH
Q 045863 264 T-IVMVSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTT---TMLWI----H-GQISTLPTMKSLFIPSA 329 (537)
Q Consensus 264 ~-~im~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~N---ll~~~----~-~~isf~~~~~~~~pp~l 329 (537)
= +++.||. ..+ .+|+-. ..+|- .|-..|-+=+|++ .++.. + -+.+..+.+..+.|.++
T Consensus 410 kwal~aPI~vPm~~~lGisp~~t------~~Ayr--iGDs~tNiItP~~~y~~lil~~~~~y~k~~g~Gtl~s~mlPysi 481 (513)
T TIGR00819 410 IWAILAPIFVPMFMLAGFAPAFA------QAAFR--IADSSTLIIAPMMPFFGLFLAFLMKYKKDAGLGTLISLMLPYPA 481 (513)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHH------HHHHH--HhchHHHhhccCcchHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 5 5555654 444 344322 22332 2222232223455 22222 1 24677888888888877
Q ss_pred HHHH
Q 045863 330 VSLA 333 (537)
Q Consensus 330 v~l~ 333 (537)
..++
T Consensus 482 ~~l~ 485 (513)
T TIGR00819 482 FFLI 485 (513)
T ss_pred HHHH
Confidence 6544
No 105
>PRK09695 glycolate transporter; Provisional
Probab=96.27 E-value=2.8 Score=47.24 Aligned_cols=73 Identities=15% Similarity=0.303 Sum_probs=50.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhccc----hhHHHHHHHHHHHh-CC
Q 045863 204 EVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSILDN----LTSTIVMVSLLRKL-VP 276 (537)
Q Consensus 204 ~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl~N----~ta~~im~PI~~~l-~~ 276 (537)
..+++.|.+++++.+-..++|+|-+|+|.+.+.+ .+.|...+. ++....+|+.. -+.+++-.|+...+ .+
T Consensus 76 al~pI~~II~~AI~ly~~~~~sGa~~~I~~~l~~is~D~riQ~Ll---I~~~Fg~FlEg~aGFGtPvAI~aplLv~LGF~ 152 (560)
T PRK09695 76 GLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLL---IGFSFGALLEGAAGFGAPVAITGALLVGLGFK 152 (560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHhcCCchHHHHHH---HHHHHHHHHHHhhcCCCcHHHHHHHHHHcCCC
Confidence 3447889999999999999999999999999865 333332222 33444455444 34557778888777 35
Q ss_pred Chh
Q 045863 277 PSE 279 (537)
Q Consensus 277 p~~ 279 (537)
|.+
T Consensus 153 Pl~ 155 (560)
T PRK09695 153 PLY 155 (560)
T ss_pred hHH
Confidence 533
No 106
>PF03806 ABG_transport: AbgT putative transporter family; InterPro: IPR004697 The p-aminobenzoyl-glutamate transporter family includes two putative transporters, the AbgT protein of Escherichia coli and MtrF of Neisseria gonorrhoeae. AbgT expression is apparently cryptic in wild type cells, but when present on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs []. p-Aminobenzoate is a constituent of, and a precursor for, the biosynthesis of folic acid. It is not currently known if AbgT is naturally involved in transporting p-aminobenzoyl-glutamate, or if it only becomes involved when under altered regulation. MtrF is an inner membrane protein which, together with the MtrCDE efflux pump, is required for high-level resistance to hydrophobic antimicrobial agents in N. gonorrhoeae []. Its role in this process is not known, but it has been suggested that it may be a component of the efflux pump which is dispensible for basal activity, but required for high-level activity [].
Probab=96.19 E-value=1.1 Score=49.55 Aligned_cols=137 Identities=10% Similarity=0.058 Sum_probs=94.3
Q ss_pred CCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHh---c---CCchHHHHHHHHHHHHHHhhccchh
Q 045863 189 PSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIT---T---RKPRTLLWVIGFVTFFLSSILDNLT 262 (537)
Q Consensus 189 ~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~---~---~~~~~l~~~l~l~~~~lS~fl~N~t 262 (537)
.+.+|..+.+.+++++..+.+.+.+.+--+...++.|+++..+|.+-. + -+...++..+.++++++-.|+.+..
T Consensus 322 ks~~Dv~~~M~~~m~~m~~yiVL~F~aaQFia~F~~Snlg~i~Av~GA~~L~~~~~~~~~l~i~fill~a~iNLfi~S~S 401 (502)
T PF03806_consen 322 KSDKDVVKMMSKGMKSMAPYIVLAFFAAQFIAYFNWSNLGTILAVKGAEFLKSLGLPGIPLIIGFILLTAFINLFIGSAS 401 (502)
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhhhcch
Confidence 367788888888888888999999999999999999999999997642 2 3667788889999999999998887
Q ss_pred HH-HHHHHHH----HHh-CCChhHHHHHHHHHHHHHhhccccccccchhhhhh---Hh---c--ccCChHHHHHHhhHHH
Q 045863 263 ST-IVMVSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTML---WI---H--GQISTLPTMKSLFIPS 328 (537)
Q Consensus 263 a~-~im~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~---~~---~--~~isf~~~~~~~~pp~ 328 (537)
+= +++.|+. ..+ .+|.-.+ .+|= +|=..|-+=+|.+... .. . -+.++.+-+..++|.+
T Consensus 402 aKWailAPifVPM~m~lg~sP~~tQ------~aYR--igDS~TN~ItPl~~yf~lil~~~qkY~k~~giGTlis~mlPys 473 (502)
T PF03806_consen 402 AKWAILAPIFVPMFMLLGYSPALTQ------AAYR--IGDSSTNIITPLMPYFPLILGFAQKYDKKAGIGTLISLMLPYS 473 (502)
T ss_pred hhHHHHHhHHHHHHHHcCCCHHHHH------HHHH--hccccccccCccHHHHHHHHHHHHHhCcCccHHHHHHHHHHHH
Confidence 77 7777764 344 4554332 2221 2222332223333321 11 1 1566777777888877
Q ss_pred HHHHH
Q 045863 329 AVSLA 333 (537)
Q Consensus 329 lv~l~ 333 (537)
+..++
T Consensus 474 i~~lv 478 (502)
T PF03806_consen 474 IAFLV 478 (502)
T ss_pred HHHHH
Confidence 75544
No 107
>PF03806 ABG_transport: AbgT putative transporter family; InterPro: IPR004697 The p-aminobenzoyl-glutamate transporter family includes two putative transporters, the AbgT protein of Escherichia coli and MtrF of Neisseria gonorrhoeae. AbgT expression is apparently cryptic in wild type cells, but when present on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs []. p-Aminobenzoate is a constituent of, and a precursor for, the biosynthesis of folic acid. It is not currently known if AbgT is naturally involved in transporting p-aminobenzoyl-glutamate, or if it only becomes involved when under altered regulation. MtrF is an inner membrane protein which, together with the MtrCDE efflux pump, is required for high-level resistance to hydrophobic antimicrobial agents in N. gonorrhoeae []. Its role in this process is not known, but it has been suggested that it may be a component of the efflux pump which is dispensible for basal activity, but required for high-level activity [].
Probab=96.14 E-value=2.9 Score=46.23 Aligned_cols=87 Identities=16% Similarity=0.172 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHh---CCChhHHHH
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL---VPPSEYRKL 283 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l---~~p~~~~~~ 283 (537)
+.+-+++.+|+=....||+|+++-+-++..++.+++++........++|...++ +...++.|+..-+ ...+|.
T Consensus 79 ~PLG~Vlv~mlgvgvAE~sGll~a~~r~~~~~~p~~~vt~~v~f~Gi~sniasD-Ag~Vvl~PL~a~iF~~~GRhPl--- 154 (502)
T PF03806_consen 79 PPLGLVLVMMLGVGVAEKSGLLSALMRKLVLKAPPRLVTPAVVFVGIMSNIASD-AGYVVLPPLAAMIFAAVGRHPL--- 154 (502)
T ss_pred CcHHHHHHHHHHHHHHHHhchHHHHHHHHhccCCcchhhHHHHHHHHHhccccc-ceeEeHHhhHHHHHHHcCCChH---
Confidence 555566666777777899999999999998887777776666667777766544 4446677876332 233343
Q ss_pred HHHHHHHHHhhccc
Q 045863 284 LGAVVVIAANAGGA 297 (537)
Q Consensus 284 ~l~~va~aan~Gg~ 297 (537)
..+..+|++..||.
T Consensus 155 aGi~~afa~vs~Gf 168 (502)
T PF03806_consen 155 AGIAAAFAGVSGGF 168 (502)
T ss_pred HHHHHHHHHHhccc
Confidence 24678888877655
No 108
>COG1757 NhaC Na+/H+ antiporter [Energy production and conversion]
Probab=96.06 E-value=0.39 Score=53.07 Aligned_cols=134 Identities=13% Similarity=0.144 Sum_probs=87.1
Q ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC--CchHHHHHHHHHHHHHHhhcc-chhHHHHHHH
Q 045863 193 IAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR--KPRTLLWVIGFVTFFLSSILD-NLTSTIVMVS 269 (537)
Q Consensus 193 ~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~--~~~~l~~~l~l~~~~lS~fl~-N~ta~~im~P 269 (537)
+.-+-...+.+....++.+++.+.-++..+++.|.++++...+.++ +.+.+...+++.+.+.+.++. |..+..++.|
T Consensus 310 ~~~~~l~~G~~sM~~~i~ilila~siggi~~~~G~~~~l~~~~~~~i~s~~~l~~~~~l~~~~~~~~tg~~~~si~i~gp 389 (485)
T COG1757 310 EVLKLLNRGIKSMLGAILILILAWSIGGILEDLGTLEYLLSLLQKFIKSKGSLPLIIFLLAILVAFATGTSWGSIIIMGP 389 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhhcceeeeeeeHH
Confidence 3333333334445578889999999999999999999999999764 444677777777888877774 4455588899
Q ss_pred HHHHhC---CChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcc-cCChHHHHHHhhHHH
Q 045863 270 LLRKLV---PPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHG-QISTLPTMKSLFIPS 328 (537)
Q Consensus 270 I~~~l~---~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~-~isf~~~~~~~~pp~ 328 (537)
+++++. +.++. ...-.+-.++.++.-+.|+++.+=......+ +.+..+|+-+.+...
T Consensus 390 ia~~i~~~~~~~~~--~l~~~l~~gg~~~~~~~Pws~~~i~~s~~~~~~v~~~t~lPya~~~~ 450 (485)
T COG1757 390 IAKEIADKLGLHSK--RLSRALEAGGTFGDHLSPWSDTTILSSTGLGCIVHVTTQLPYAFYAA 450 (485)
T ss_pred HHHHHHHHhCccHH--HHHHHHHhcCeecCCCCCcchhHHHHHhccCCCchhHhhHHHHHHHH
Confidence 998772 22222 1111233344457778999876643333322 466677765555444
No 109
>PRK11339 abgT putative aminobenzoyl-glutamate transporter; Provisional
Probab=95.91 E-value=0.9 Score=50.23 Aligned_cols=139 Identities=8% Similarity=0.073 Sum_probs=93.5
Q ss_pred CCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc------CCchHHHHHHHHHHHHHHhhccchh
Q 045863 189 PSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT------RKPRTLLWVIGFVTFFLSSILDNLT 262 (537)
Q Consensus 189 ~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~------~~~~~l~~~l~l~~~~lS~fl~N~t 262 (537)
.+.+|..+.+.++.++..+.+++++++--....++.+++++.++.+... -+...+...+.++++++..|+++..
T Consensus 327 ks~~Dv~~~m~~g~~~m~~~ivl~F~~Aqfia~F~~snlG~ilav~gA~~L~~~~l~~~pl~i~~ill~a~iNlfI~SgS 406 (508)
T PRK11339 327 RRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGS 406 (508)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHccccHH
Confidence 3677888888887777878888887888888889999999999877532 2566667889999999999997776
Q ss_pred HH-HHHHHHH----HHh-CCChhHHHHHHHHHHHH--Hhhccccccccchhhhhh--Hhcc--cCChHHHHHHhhHHHHH
Q 045863 263 ST-IVMVSLL----RKL-VPPSEYRKLLGAVVVIA--ANAGGAWTPIGDVTTTML--WIHG--QISTLPTMKSLFIPSAV 330 (537)
Q Consensus 263 a~-~im~PI~----~~l-~~p~~~~~~~l~~va~a--an~Gg~~TpiG~~~Nll~--~~~~--~isf~~~~~~~~pp~lv 330 (537)
+= +++.|+. ..+ .+|+-.+ .+|- -+.+-..||...---+++ .... +.++.+|++.++|.++.
T Consensus 407 akwai~aPIfVPm~~llGisPe~tq------~AyRiGDs~TNiItPl~~y~~lil~~~~~y~k~~g~Gtlis~mlPysi~ 480 (508)
T PRK11339 407 AIWSILAPIFVPMFMLLGFHPAFAQ------ILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLI 480 (508)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHH------HHHHHccchhhhcCCchHHHHHHHHHHHHhccCCCHhHHHHHHHHHHHH
Confidence 65 5666664 444 3543332 2332 122223555422111111 2223 78999999999999886
Q ss_pred HHH
Q 045863 331 SLA 333 (537)
Q Consensus 331 ~l~ 333 (537)
.++
T Consensus 481 ~lv 483 (508)
T PRK11339 481 FLV 483 (508)
T ss_pred HHH
Confidence 554
No 110
>COG2851 CitM H+/citrate symporter [Energy production and conversion]
Probab=95.89 E-value=0.52 Score=49.76 Aligned_cols=159 Identities=11% Similarity=0.089 Sum_probs=103.4
Q ss_pred HHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHH
Q 045863 155 GYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDN 234 (537)
Q Consensus 155 ~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~ 234 (537)
.+.+.+... +|..+.-+++..+.+...- ++.+|.-+.+...-++.-...-+++++=++...+++||..|.++..
T Consensus 243 lm~~Lv~gi---~p~~~lFmig~~iAL~vNY---P~vk~Q~~ri~aha~nal~vvs~i~AAGif~Gil~gtgMvdama~s 316 (433)
T COG2851 243 LMGLLVSGI---FPPGVLFMIGFAIALPVNY---PNVKEQMERIGAHAGNALMVVSLIFAAGIFLGILSGTGMVDAMAKS 316 (433)
T ss_pred HHHHHHhcc---cchhHHHHHHHHHHHHhCC---CCHHHHHHHHHHhCcchhHHHHHHHHHHHHhhhhCCCchHHHHHHH
Confidence 334456667 8888888887776655432 3666666555543333337788889999999999999999999998
Q ss_pred HhcCCchH----HHHHHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhccccccccc--
Q 045863 235 ITTRKPRT----LLWVIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGGAWTPIGD-- 303 (537)
Q Consensus 235 l~~~~~~~----l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg~~TpiG~-- 303 (537)
+.+-=|.. +-..+.+++.-++-|++|++---=+.||.... .+|. .+++++-+|-..+.+.-
T Consensus 317 i~~vIP~~lgpyl~~ivgl~svP~tf~~snDAyYfGvlPIv~e~as~yGv~pv--------~~A~AsiiGq~vh~lSPlv 388 (433)
T COG2851 317 IVSVIPDALGPYLPLIVGLLSVPFTFFMSNDAYYFGVLPIVAEAASAYGVEPV--------EIARASIIGQPVHFLSPLV 388 (433)
T ss_pred HHHhCcHhhcchHHHHHHHHcCCeEEEecCcchhhhhHHHHHHHHHHcCCCHH--------HHHHHHHhCCcceeeccch
Confidence 86532222 33445555555666789999998889998543 2432 35556555554443321
Q ss_pred hhhhhhHhcccCChHHHHHHhhHH
Q 045863 304 VTTTMLWIHGQISTLPTMKSLFIP 327 (537)
Q Consensus 304 ~~Nll~~~~~~isf~~~~~~~~pp 327 (537)
|...+..+-.++++.||-|+.+--
T Consensus 389 Pat~LlvgLa~v~~gdh~k~a~~w 412 (433)
T COG2851 389 PATYLLVGLAKVDMGDHQKFALKW 412 (433)
T ss_pred HHHHHHHHhhcCChhHHHHHHHHH
Confidence 223344555688888887765544
No 111
>TIGR00529 AF0261 converved hypothetical integral membrane protein. This protein is predicted to have 10 transmembrane regions. Members of this family are found so far in the Archaea (Archaeoglobus fulgidus and Pyrococcus horikoshii) and in a bacterial thermophile, Thermotoga maritima. In Pyrococcus, the gene is located between nadA and nadB, two components of an enzyme involved in de novo synthesis of NAD. By PSI-BLAST, this family shows similarity (but not necessarily homology) to gluconate permease and other transport proteins.
Probab=95.62 E-value=1.4 Score=47.37 Aligned_cols=122 Identities=14% Similarity=0.196 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCC--chHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHH
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRK--PRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLL 284 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~--~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~ 284 (537)
.+++.+.+.+.+.+.++++|..|.+++.+.+.+ +..+.+.+.++-...+ ....|++.++.|+.......-+.
T Consensus 257 ~illii~agg~fk~vL~~sGi~~~l~~~~~~~~ip~~~l~~lia~ilg~~t--Ga~it~agi~~Pll~~~~~~~~~---- 330 (387)
T TIGR00529 257 WIFLLLFAVMIYKVVIEHSGVGESIAAEFVSWNLPPWILLILLPLVSGIST--GITQAYVGISLPLLMEFFSSAKY---- 330 (387)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhccCchhH----
Confidence 478888889999999999999999999987654 2333333333222222 25666668999997422221111
Q ss_pred HHHHHHHHhhccc-cccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHH
Q 045863 285 GAVVVIAANAGGA-WTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPL 336 (537)
Q Consensus 285 l~~va~aan~Gg~-~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~ 336 (537)
..+++++..||. ..|+-+. =-+..++.+.+..|-.|...+|..+.+...+
T Consensus 331 -~~l~la~g~g~~~~Shvnd~-fwl~~eyf~~~~~~~~k~~~~~~~~~~~~~~ 381 (387)
T TIGR00529 331 -AVLTYMFGYGGVILSPVHLC-VVLSAEYFGVEVFKIYRKVLLPLVLTLILGA 381 (387)
T ss_pred -HHHHHHHHhhhhccCccccc-hhHhHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 235556555555 5566555 4456667899999999988899887666544
No 112
>COG1288 Predicted membrane protein [Function unknown]
Probab=95.20 E-value=0.55 Score=50.58 Aligned_cols=137 Identities=12% Similarity=0.062 Sum_probs=73.3
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHH------HHHhChHHHHHHH----HhcCCchHHHHHHHHHHHHHHhhcc
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEI------VDAHQGFKLVTDN----ITTRKPRTLLWVIGFVTFFLSSILD 259 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~------l~~tGl~~ria~~----l~~~~~~~l~~~l~l~~~~lS~fl~ 259 (537)
+.+|..+.|.++-+ =++.++++++-+ +++.-+.|-+-+. +.+-+.....+...+.-.+++-+.+
T Consensus 321 se~~~~~sF~~Ga~------~lv~~aLiiGiARgI~lim~~g~i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~Vp 394 (481)
T COG1288 321 SENDIASSFIEGAS------DLLGVALIIGLARGINLIMDDGMILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVP 394 (481)
T ss_pred chhHHHHHHHHhHH------HHHHHHHHHHhhhceEEEecCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEe
Confidence 67777776655221 123334433322 3333344444433 3444666667777777888888875
Q ss_pred ch-hHH----HHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhh-H--hcccCChHHHHHHhhHHHHHH
Q 045863 260 NL-TST----IVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTML-W--IHGQISTLPTMKSLFIPSAVS 331 (537)
Q Consensus 260 N~-ta~----~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~-~--~~~~isf~~~~~~~~pp~lv~ 331 (537)
+. .-+ -+|.|+++-..-+++. .-.+| +.|...+-+=+|+.-++ + ...+++|..|+|+..|+..+.
T Consensus 395 S~SG~A~ltMPImAPLaD~vgv~Rqv-----vV~Af--q~g~G~~n~I~PTSg~~ma~La~~~i~y~~W~Kfv~pl~~i~ 467 (481)
T COG1288 395 SGSGLAVLTMPIMAPLADLVGVPRQV-----VVLAF--QLGDGFSNIIAPTSGLLMATLAMARVPYGTWLKFVAPLLGIL 467 (481)
T ss_pred CCCchhHhhchhhhhhHHhcCCCHHH-----hhhhh--hhcchhhheecCchHHHHHHHHHccCChhHHHHHHHHHHHHH
Confidence 43 222 4555666554433332 12233 33333333334442222 2 245899999999999988776
Q ss_pred HHHHHHHH
Q 045863 332 LAVPLAFL 339 (537)
Q Consensus 332 l~v~~~ll 339 (537)
+++..+++
T Consensus 468 ~li~~~~l 475 (481)
T COG1288 468 FLISSVVL 475 (481)
T ss_pred HHHHHHHH
Confidence 66555433
No 113
>COG4756 Predicted cation transporter [General function prediction only]
Probab=94.98 E-value=0.51 Score=47.28 Aligned_cols=99 Identities=16% Similarity=0.244 Sum_probs=58.9
Q ss_pred HHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhcccc
Q 045863 219 VEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAW 298 (537)
Q Consensus 219 ~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~ 298 (537)
..+++|+ .....++.+.|-.-..+.+.+.+.-.+.|+.++-..++.++.-++....-|+++..++..-.+++...|.+.
T Consensus 93 fy~~~kh-~ys~la~~l~k~gi~VfAfll~f~lGL~SSvISviV~AvIlAEia~~~n~~r~~Kv~~vVya~FAvG~GAAL 171 (367)
T COG4756 93 FYALNKH-KYSELADALAKPGIAVFAFLLIFGLGLSSSVISVIVAAVILAEIAGFANAPRAYKVRAVVYAAFAVGAGAAL 171 (367)
T ss_pred HHHHHHH-HHHHHHHHHhcCCceehhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhceeeeeeeeehhcccccc
Confidence 3445554 333444445443333444444445566777777777788887776544333333222222345666678889
Q ss_pred ccccchhhhhhHhcccCChH
Q 045863 299 TPIGDVTTTMLWIHGQISTL 318 (537)
Q Consensus 299 TpiG~~~Nll~~~~~~isf~ 318 (537)
||+|.|-..++....+-+|+
T Consensus 172 tPiGEPLSTIav~KLn~~Ff 191 (367)
T COG4756 172 TPIGEPLSTIAVAKLNQGFF 191 (367)
T ss_pred CcCCCccHHHHHHHHccCeE
Confidence 99999999888886665554
No 114
>COG3069 DcuC C4-dicarboxylate transporter [Energy production and conversion]
Probab=94.44 E-value=1.4 Score=46.66 Aligned_cols=136 Identities=16% Similarity=0.242 Sum_probs=92.2
Q ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHh--cCCchHHHHHHHHHHHHHHhhc-cchhHHHHH-
Q 045863 192 EIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIT--TRKPRTLLWVIGFVTFFLSSIL-DNLTSTIVM- 267 (537)
Q Consensus 192 ~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~--~~~~~~l~~~l~l~~~~lS~fl-~N~ta~~im- 267 (537)
|+.|++..+ .|.+.+.+++++.+++.++..+|..|.+-.... +.....+.+...+..++..-.+ +.++...-+
T Consensus 299 ~~ff~GMg~---~fanVV~liVAa~vFA~GL~tiGaIdalI~~a~~~g~g~~~vmli~~l~~~L~aIvtGSGnApf~AF~ 375 (451)
T COG3069 299 EAFFDGMGD---AFANVVMLIVAAGVFAQGLKTIGAIDALISGATSFGSGGIGLMLILVLLTFLAAIVTGSGNAPFIAFV 375 (451)
T ss_pred HHHHHHHHH---HhhhhHHHHHhhHHHHHHhhHhhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhCCCCchhhhHH
Confidence 344444443 456999999999999999999999999887764 3445556666666666666665 334333222
Q ss_pred ---HHHHHHh-CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHH
Q 045863 268 ---VSLLRKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVP 335 (537)
Q Consensus 268 ---~PI~~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~ 335 (537)
-|++..+ .+|. + +.++...++|+|-.+.|+....- ...+-.++|-+|-.+.-.+|.++.++..
T Consensus 376 ~lip~~Aa~lgi~~v-~---l~mpm~~As~igRt~SPisgVvv-avaG~a~vSPfe~vKRts~pm~~~lv~v 442 (451)
T COG3069 376 ELIPKLAAGLGINPV-Y---LIMPMLQASALGRTLSPVSGVVV-AVAGMAKVSPFEVVKRTSVPMLVGLVTV 442 (451)
T ss_pred hhcchhhhhcCCChH-H---HhhhHHHHHhhccccccccceee-eeccccccChhheeeccCcchhhHHHHH
Confidence 2445555 3432 2 35789999999999999865431 2334457888998888889988776633
No 115
>PF06450 NhaB: Bacterial Na+/H+ antiporter B (NhaB); InterPro: IPR004671 The Escherichia coli NhaB Na+:H+ Antiporter (NhaB) protein has 12 predicted TMS, and catalyses sodium/proton exchange. Unlike NhaA, IPR004670 from INTERPRO, this activity is not pH dependent.; GO: 0015385 sodium:hydrogen antiporter activity, 0006814 sodium ion transport, 0016021 integral to membrane
Probab=94.11 E-value=0.57 Score=49.72 Aligned_cols=170 Identities=16% Similarity=0.175 Sum_probs=108.4
Q ss_pred cchHHHHHHHHHHHHHHHhc-CCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSI-GAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLW 245 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi-~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~ 245 (537)
+..+.++++|..+..+.... |-.+....-++|++ --|---++.--|.++..+.+..+|+.+-.+....++..-..
T Consensus 318 ~HlA~VGlIGLsVIil~Taf~Git~EH~iGkAFeE----aLPFTALL~VFF~vVaVI~dQ~LF~PiI~~VL~~~~~~Ql~ 393 (515)
T PF06450_consen 318 FHLAEVGLIGLSVIILATAFCGITDEHAIGKAFEE----ALPFTALLVVFFAVVAVIIDQHLFTPIIQFVLSAEGSSQLA 393 (515)
T ss_pred HHHHHHhHHHHHHHHHHHHhcCCcchhhhhHhHhh----ccchHHHHHHHHHHHHHHhhhhhhHHHHHHHHcCCCccchh
Confidence 77888888887766554321 21132222223333 33666677777888899999999999999987766666677
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHH-h----CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHh-----cccC
Q 045863 246 VIGFVTFFLSSILDNLTSTIVMVSLLRK-L----VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI-----HGQI 315 (537)
Q Consensus 246 ~l~l~~~~lS~fl~N~ta~~im~PI~~~-l----~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-----~~~i 315 (537)
.+++...++|+.-||+-+.-+-+-=+++ + +..+++. .+..++.-+.|+=|..||=|-..=+..-. -.++
T Consensus 394 ~fy~aNGlLS~iSDNVFV~TVYI~E~k~A~~~G~Is~~qf~-~LAVAINTGTNlPSVATPNGQAAFLFLLTSalAPLirL 472 (515)
T PF06450_consen 394 MFYIANGLLSMISDNVFVATVYINEVKAALDAGVISREQFD-LLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRL 472 (515)
T ss_pred HHHHhhhhHHhhccceeEEEEeHhhHHHHHHcCCcCHHHHh-hHHhhhhcCCCCCcCcCCCchhHHHHHHHHhhHHHHHH
Confidence 8888999999999998765443332322 2 2333332 22344555666666777766555443322 2378
Q ss_pred ChHHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 316 STLPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 316 sf~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
|.....+..+|..++..++.+...++
T Consensus 473 SYgrMV~MAlPYTiVl~~vGl~~v~~ 498 (515)
T PF06450_consen 473 SYGRMVWMALPYTIVLTLVGLLAVEF 498 (515)
T ss_pred hHhhHHhHhccHHHHHHHHHHHHHHH
Confidence 88887777888888877766654433
No 116
>PF07854 DUF1646: Protein of unknown function (DUF1646); InterPro: IPR012443 Some of the members of this family are hypothetical bacterial and archaeal proteins, but others are annotated as being cation transporters expressed by the archaeon Methanosarcina mazei (Methanosarcina frisia) (Q8PXG5 from SWISSPROT, Q8PXG7 from SWISSPROT and Q8PXG8 from SWISSPROT).
Probab=93.82 E-value=0.25 Score=51.02 Aligned_cols=96 Identities=19% Similarity=0.173 Sum_probs=60.3
Q ss_pred HHHHHHH-HhcCCchHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchh
Q 045863 228 FKLVTDN-ITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVM-VSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVT 305 (537)
Q Consensus 228 ~~ria~~-l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im-~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~ 305 (537)
||.+.++ +.+-++..+.|.=+ +|+..||.|-++.- -|-+ +.. ..|..+|+.- +.|.++.=||-|
T Consensus 245 fkPli~~y~~~l~~~~LYw~Nm-----iSAvlDNATLaAAEIsP~m----~~~-qi~aiLmgLl----iSGGMlIPGNIP 310 (347)
T PF07854_consen 245 FKPLIDKYIIKLPPEILYWVNM-----ISAVLDNATLAAAEISPEM----SEE-QIRAILMGLL----ISGGMLIPGNIP 310 (347)
T ss_pred cHHHHHHHHhcCCccceehhhH-----HHHHHhhHHHHHHHhCccc----CHH-HHHHHHHHHH----HcCCeecCCCcc
Confidence 3555655 45555444444333 47788998877542 2322 111 2223334433 335556669999
Q ss_pred hhhhHhcccCChHHHHHHhhHHHHHHHHHHHH
Q 045863 306 TTMLWIHGQISTLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 306 Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ 337 (537)
|++.++..+++..||.+.+.|.+++.+.+-+.
T Consensus 311 NIIsAgkL~I~skEWar~gvPlGl~~m~~yfi 342 (347)
T PF07854_consen 311 NIISAGKLKITSKEWARLGVPLGLVLMVVYFI 342 (347)
T ss_pred hhhccccCccchHHHHHHcccHHHHHHHHHHH
Confidence 99999999999999999999999877664443
No 117
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=93.78 E-value=2.8 Score=43.02 Aligned_cols=120 Identities=11% Similarity=0.096 Sum_probs=70.7
Q ss_pred HHHHHHHHhChHHHHHHHHhc----CCchHHHHHHHHHHHHHHhhccchhHH-HHH-----HHHHHHh--CCChhHHHHH
Q 045863 217 TIVEIVDAHQGFKLVTDNITT----RKPRTLLWVIGFVTFFLSSILDNLTST-IVM-----VSLLRKL--VPPSEYRKLL 284 (537)
Q Consensus 217 ii~~~l~~tGl~~ria~~l~~----~~~~~l~~~l~l~~~~lS~fl~N~ta~-~im-----~PI~~~l--~~p~~~~~~~ 284 (537)
.++..+.+.|++|-++..+.+ +|...-...-++--++.++.|.|.=++ .+| +|+.-+. .+|--.
T Consensus 172 aLG~vF~~AGVG~vIa~lv~~viP~g~~~~~ViaYclGMalFTmIMGNAFAAF~ViTaGIGiPfvi~~~GgnPaiv---- 247 (308)
T PF06166_consen 172 ALGAVFTAAGVGDVIASLVSSVIPEGNRFIGVIAYCLGMALFTMIMGNAFAAFPVITAGIGIPFVIAQFGGNPAIV---- 247 (308)
T ss_pred HHHHHHHhcCccHHHHHHHHhhcCCCCeehhHHHHHHHHHHHHHHHccHHHHhHHHHhccCceEEEecCCCCHHHH----
Confidence 467788999999999988753 344444445555567889999988776 233 2554322 344221
Q ss_pred HHHHHHHHh-hccccccccchhhhhhHhcccCC-hHHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 285 GAVVVIAAN-AGGAWTPIGDVTTTMLWIHGQIS-TLPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 285 l~~va~aan-~Gg~~TpiG~~~Nll~~~~~~is-f~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
-++++-|. ||-.+||...-=|++-+.-.++. =..-.|.-.|..++.+++-..++|+
T Consensus 248 -gAlgM~aGyCGTLmTPMAANFNiVPaALLElkDk~gVIKaQ~p~Al~llvv~I~LMy~ 305 (308)
T PF06166_consen 248 -GALGMTAGYCGTLMTPMAANFNIVPAALLELKDKYGVIKAQAPTALVLLVVNIVLMYF 305 (308)
T ss_pred -HHHHHhhcchhcccChhhhhcCcchHHHhcCCccccchhhhhHHHHHHHHHHHHHHHH
Confidence 22333332 45568887766665543322221 1123456677777777766666665
No 118
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=93.58 E-value=5.6 Score=43.55 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHH--HHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHH
Q 045863 170 SGVGLLMAVSLWI--VRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVI 247 (537)
Q Consensus 170 ~~val~~~~~l~v--~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l 247 (537)
+.+||+..+++.. ++.-...+.++..+.++++++....+++...+.-.+.+.++++|+.|.++..+.+.+-..++. -
T Consensus 265 p~iALlig~l~a~~~l~~~~~~~~~~~~~~~~~al~~~g~IlLItgaGGafg~vl~~sgi~~~i~~~~~~~~ip~lll-~ 343 (441)
T PF02447_consen 265 PNIALLIGVLIALYLLGRRRGMSREEVMKWLEKALKPAGMILLITGAGGAFGQVLKDSGIGDAIANLLSGSGIPPLLL-A 343 (441)
T ss_pred cHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHhCCHHHHHHHHHHhcCCcHHHH-H
Confidence 3555555444432 232101145555556666666666888888899999999999999999999887543332333 3
Q ss_pred HHHHHHHHhhccchhHH-----HHHHHHHHHhCCChhHHHHHHHHHHHHHhhcccccc-ccchhhhhhHhcccCChHHHH
Q 045863 248 GFVTFFLSSILDNLTST-----IVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTP-IGDVTTTMLWIHGQISTLPTM 321 (537)
Q Consensus 248 ~l~~~~lS~fl~N~ta~-----~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~Tp-iG~~~Nll~~~~~~isf~~~~ 321 (537)
+++++++.....+.|++ .++.|++..+..-++. .++.+...|+.... +-|+-==++.+..++|..|-+
T Consensus 344 fliaa~lr~aqGSaTVA~iTaa~I~aPl~~~~~~v~p~------l~~lAigaGs~~~shvNDsgFWlv~~~~g~s~k~tl 417 (441)
T PF02447_consen 344 FLIAALLRTAQGSATVAMITAAGIVAPLLASLGGVSPV------LLVLAIGAGSMFFSHVNDSGFWLVKRFFGLSVKQTL 417 (441)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhccccccccchhHH------HHHHHHhcCCceeecCCCCceEEEeccccCCHHHHH
Confidence 33444444444444433 4556666554211111 23333334544222 222111122334577777766
Q ss_pred HHhhHHHHHHHH
Q 045863 322 KSLFIPSAVSLA 333 (537)
Q Consensus 322 ~~~~pp~lv~l~ 333 (537)
|...+...+..+
T Consensus 418 kt~t~~~~i~~v 429 (441)
T PF02447_consen 418 KTWTVMTTIASV 429 (441)
T ss_pred HhhHHHHHHHHH
Confidence 655555544433
No 119
>COG2056 Predicted permease [General function prediction only]
Probab=93.45 E-value=4.1 Score=43.02 Aligned_cols=130 Identities=18% Similarity=0.173 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHH-H
Q 045863 169 KSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLL-W 245 (537)
Q Consensus 169 ~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~-~ 245 (537)
...-++.|.+++.+.|++ +.+|.-+-+++++.-..-+-|....+--+++.+++||-.+.+.+.... ++.+.+. .
T Consensus 264 milgal~gliv~~~~gv~---~~ke~d~~~~~G~kmMa~IgFVMl~AaGfa~Vi~~TG~V~~LV~s~~~~~g~sK~l~a~ 340 (444)
T COG2056 264 MILGALAGLIVFFLSGVI---KWKETDDVFTEGVKMMAFIGFVMLVAAGFAEVINATGAVEELVESSSSIIGQSKLLAAL 340 (444)
T ss_pred chHHHHHHHHHHHHhcce---ehhhhHHHHHhhHHHHHHHHHHHHHHhHHHHHHHhccCHHHHHHHHHHHhcccHHHHHH
Confidence 334566777777778876 555555545554322222222233333456778899988888775532 2333333 3
Q ss_pred HHHHHHHHHHhhc-----cchhHHHHHHHHHHHh-CCChhHHHHHHHHHHHHHhhccccccccchh
Q 045863 246 VIGFVTFFLSSIL-----DNLTSTIVMVSLLRKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVT 305 (537)
Q Consensus 246 ~l~l~~~~lS~fl-----~N~ta~~im~PI~~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~ 305 (537)
.+.++..++++=+ .=-..+.+.+|+|.++ .+|... ...+..++.+|-+..|-.+.+
T Consensus 341 lMlvvGLlITMGIGsSF~TIPIIA~iyVPLc~~lGFSp~at----i~liG~AaALGDAGSPASDST 402 (444)
T COG2056 341 LMLVVGLLITMGIGSSFGTIPIIAAIYVPLCLKLGFSPLAT----IALIGTAAALGDAGSPASDST 402 (444)
T ss_pred HHHHHHHHHhccccccccchHHHHHHHHhHHHHhCCCHHHH----HHHHHHHHHhcCCCCCcccCC
Confidence 3333444444443 3333336778999998 465443 234666777788888866543
No 120
>COG4756 Predicted cation transporter [General function prediction only]
Probab=93.19 E-value=0.28 Score=49.06 Aligned_cols=80 Identities=13% Similarity=0.044 Sum_probs=53.0
Q ss_pred HHHhhccchhHH-HHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHH
Q 045863 253 FLSSILDNLTST-IVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVS 331 (537)
Q Consensus 253 ~lS~fl~N~ta~-~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~ 331 (537)
.+|+..||.|-+ +-+.|-.... ..|..+|+.. +.|.++.=||-||+++++..++++.+|.+.+.|.++..
T Consensus 278 ~~SAv~DNATL~AAevgP~ltee-----qirsalmsLv----IsGGmlIPGNiPNIV~AGrLrItm~EWar~gvP~Gia~ 348 (367)
T COG4756 278 LLSAVADNATLVAAEVGPELTEE-----QIRSALMSLV----ISGGMLIPGNIPNIVMAGRLRITMKEWARLGVPVGIAV 348 (367)
T ss_pred HHHHHhcchhhHHHHhCcHhhHH-----HHHHHHHHHH----HcCCeecCCCCcceeeeeeEEeehhhHHHhcccHHHHH
Confidence 457778888766 3444544211 1122344443 33556677999999999989999999999999998876
Q ss_pred HHHHHHHHHh
Q 045863 332 LAVPLAFLSL 341 (537)
Q Consensus 332 l~v~~~ll~~ 341 (537)
++....+.++
T Consensus 349 ~~a~fi~i~v 358 (367)
T COG4756 349 FIAIFIYILV 358 (367)
T ss_pred HHHHHhheeE
Confidence 6644443333
No 121
>PF07399 DUF1504: Protein of unknown function (DUF1504); InterPro: IPR009978 This family consists of several hypothetical bacterial proteins of around 440 residues in length. The function of this family is unknown.
Probab=93.18 E-value=1.2 Score=47.50 Aligned_cols=111 Identities=19% Similarity=0.225 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHhCCChhHHHHHHHHH
Q 045863 209 VFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGAVV 288 (537)
Q Consensus 209 I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~l~~p~~~~~~~l~~v 288 (537)
+-++.+..++-.++++- |+...+.+-++. .+++-+..+++++||.+.+-+-. ++. .-++.. +| .+
T Consensus 317 VgFFLaGLVvlGglQ~W----Wlqpll~~m~~~----~lf~ga~~LTa~tDNAalTYLgs-lv~--g~sd~~--kY--al 381 (438)
T PF07399_consen 317 VGFFLAGLVVLGGLQQW----WLQPLLSGMSPL----ALFFGATALTAFTDNAALTYLGS-LVP--GLSDAF--KY--AL 381 (438)
T ss_pred HHHHHhhHHHcCchHHH----HHHHHHhcCChh----HHHHHHHHHHHHhhhHHHHHHHH-hcc--CCCHHH--HH--HH
Confidence 34455555555555553 344444444544 34566778899999988774421 111 111222 34 45
Q ss_pred HHHHhhccccccccchhhhhhHh-------cccCChHHHHHHhhHHHHHHHHH
Q 045863 289 VIAANAGGAWTPIGDVTTTMLWI-------HGQISTLPTMKSLFIPSAVSLAV 334 (537)
Q Consensus 289 a~aan~Gg~~TpiG~~~Nll~~~-------~~~isf~~~~~~~~pp~lv~l~v 334 (537)
.-+|-.||.+|.|+|+||+--.. ..+++-..-+...++|++++...
T Consensus 382 VAGAVtGGGLTVIANAPNpaG~aiLr~~F~d~~Is~~~L~l~AL~PT~ia~~~ 434 (438)
T PF07399_consen 382 VAGAVTGGGLTVIANAPNPAGQAILRKHFPDGSISPLGLFLAALPPTLIAALA 434 (438)
T ss_pred HhheeccCceeEeccCCChhhHHHHhccCCCCCcChHHHHHHHHhHHHHHHHH
Confidence 66777799999999999975322 13588888888888998876553
No 122
>TIGR00791 gntP gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli.
Probab=93.07 E-value=16 Score=39.87 Aligned_cols=136 Identities=10% Similarity=0.076 Sum_probs=75.6
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccch-----hHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNL-----TST 264 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~-----ta~ 264 (537)
+.++..+.+.++++....++..+.....+.+.++++|..|.++..+.+.+-.. .+..++++.+++..+.+. ++.
T Consensus 285 ~~~~~~~~~~~g~~~~~~i~li~~~gg~f~~vl~~~G~~~~l~~~~~~~~~~~-~~l~fli~~~i~~atGS~tva~~~~~ 363 (440)
T TIGR00791 285 PMDQVMDSCGSAIGSIAMILLIIGGGGAFKQVLIDSGVGDYIAELMSGMNISP-ILMAWLIAAILRIALGSATVAALTAA 363 (440)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCH-HHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 45565555555444444554444458999999999999999999987632112 222455556666666543 444
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHhhccccccc-cchhhhhhHhcccCChHHHHHHhhHHHHHHH
Q 045863 265 IVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTPI-GDVTTTMLWIHGQISTLPTMKSLFIPSAVSL 332 (537)
Q Consensus 265 ~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~Tpi-G~~~Nll~~~~~~isf~~~~~~~~pp~lv~l 332 (537)
.++.|+......-++. .+..+++ .|+...+- -|+.-.+..+..+++..|-.|...+...+.-
T Consensus 364 ~I~~Pil~~~~g~~~~----~~~lai~--aG~~~~sH~nd~~fwl~~~~~g~~~~~~~k~~~~~~~i~~ 426 (440)
T TIGR00791 364 GLVAPLLGQYSGVNPA----LLVLATG--AGSVIASHVNDAGFWLFKEYFGLTVKETLKTWTLLETIIS 426 (440)
T ss_pred HHHHHHhhccCCcCHH----HHHHHHh--cCCcccccCCCChhhhhhhhcCCCHhhhhhhhhHHHHHHH
Confidence 7889997422111111 1223333 34443332 2223223445667777666666555554433
No 123
>PRK10472 low affinity gluconate transporter; Provisional
Probab=92.91 E-value=14 Score=40.50 Aligned_cols=155 Identities=10% Similarity=0.027 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHH--HHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHH
Q 045863 169 KSGVGLLMAVSLWI--VRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWV 246 (537)
Q Consensus 169 ~~~val~~~~~l~v--~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~ 246 (537)
.+.+|++.++++.+ +|.-...+.++..+.+++++.....+++...+.=.+.+.+.++|+.|.++..+.+.+-..++..
T Consensus 265 ~p~iALlig~l~a~~~lg~~~~~~~~~~~~~~~~al~~~g~ilLItGaGGafg~vL~~sgig~~l~~~~~~~~~p~llla 344 (445)
T PRK10472 265 HPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITC 344 (445)
T ss_pred ChHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHhhhHhheeecChHHHHHHHHHCCHHHHHHHHHHhCCCcHHHHH
Confidence 34666666555443 3221112334444446666666546666666667799999999999999999976543333333
Q ss_pred HHHHHHHHHhhccchh-----HHHHHHHHHHHhCCChhHHHHHHHHHHHHHhhcccccc-ccchhhhhhHhcccCChHHH
Q 045863 247 IGFVTFFLSSILDNLT-----STIVMVSLLRKLVPPSEYRKLLGAVVVIAANAGGAWTP-IGDVTTTMLWIHGQISTLPT 320 (537)
Q Consensus 247 l~l~~~~lS~fl~N~t-----a~~im~PI~~~l~~p~~~~~~~l~~va~aan~Gg~~Tp-iG~~~Nll~~~~~~isf~~~ 320 (537)
+. ++.++-....+.| ++.++.|+..++..+.-. ...++.+...|+.... +-|+-==+..+..++|..|-
T Consensus 345 fl-ia~~lr~a~GSaTVA~iTaa~i~apll~~~~~~~~~----~~l~~lAi~aGs~~~shvNDsgFW~v~~~~gl~~~~t 419 (445)
T PRK10472 345 FV-LAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQ----MAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAQT 419 (445)
T ss_pred HH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCchh----HHHHHHHHhCCCceeccCCCCcchhhhhhcCCCHHhh
Confidence 33 3333333333333 336677886543222111 1234445555655433 22221112333456666555
Q ss_pred HHHhhHHH
Q 045863 321 MKSLFIPS 328 (537)
Q Consensus 321 ~~~~~pp~ 328 (537)
+|...+..
T Consensus 420 lkt~t~~~ 427 (445)
T PRK10472 420 LKTWTMME 427 (445)
T ss_pred hheehHHH
Confidence 54443433
No 124
>PF03553 Na_H_antiporter: Na+/H+ antiporter family; InterPro: IPR018461 A single member of the NhaC family, a protein from Bacillus firmus, has been functionally characterised. It is involved in pH homeostasis and sodium extrusion. Members of the NhaC family are found in both Gram-negative bacteria and Gram-positive bacteria.; GO: 0015385 sodium:hydrogen antiporter activity, 0006814 sodium ion transport, 0006885 regulation of pH, 0016021 integral to membrane
Probab=90.35 E-value=18 Score=37.03 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH----HHHHHHHHHHHhH-chHHHHHHHHhhhh----ccCCCCCh
Q 045863 431 GALFFLGILLSVSSLEAAGLLREIANYLDAHISNID----LIASAIGVVSAVI-DNVPLVAATMGMYD----LTSFPQDS 501 (537)
Q Consensus 431 tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~----~i~~i~~~lS~~i-sNtp~va~llpv~~----~~~~~~~~ 501 (537)
+++++.-...+++.++++|..+.+.+.+.+...+.. ...+++.+++... +|.....++.|++. ..+.+ +.
T Consensus 163 ~i~i~ila~~l~~i~~~~G~~~~~v~~~~~~~~~~~~l~~~~~l~~~~~~~~tgs~~~ti~i~~pi~~~l~~~~g~~-~~ 241 (303)
T PF03553_consen 163 TIIILILAGALGGILEKTGVLDALVNKLLKKIKSPRSLPAVTFLLSIIISFATGSSWGTIAIMGPIFKPLAEKMGIS-PP 241 (303)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccc-HH
Confidence 455555566678999999988888888877653222 2334444444433 44555566667662 23333 34
Q ss_pred HHHHHHHHHHHHhhhhhHHhHHHHH
Q 045863 502 KFWQLIAYCAGTGGSMLIIGSAAGV 526 (537)
Q Consensus 502 ~~~laLa~~a~iGg~lTpiGS~an~ 526 (537)
....++.-++..|..+-|++...-.
T Consensus 242 ~~a~ai~~~~~~g~~l~P~s~~~i~ 266 (303)
T PF03553_consen 242 LLAGAIESGATFGDPLSPWSDTTIL 266 (303)
T ss_pred HHHHHHHhhhhhcCCCCcchHHHHH
Confidence 4555666777888889999864443
No 125
>COG2978 AbgT Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism]
Probab=88.72 E-value=28 Score=38.11 Aligned_cols=137 Identities=9% Similarity=0.043 Sum_probs=86.6
Q ss_pred CCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHH------hcCCchHHHHHHHHHHHHHHhhccchh
Q 045863 189 PSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNI------TTRKPRTLLWVIGFVTFFLSSILDNLT 262 (537)
Q Consensus 189 ~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l------~~~~~~~l~~~l~l~~~~lS~fl~N~t 262 (537)
.+.+|+.+.+.+.+++...-+.+.+.+-=+...++.|+++..+|.+= .+-+..-++..+.++++++-.++.+..
T Consensus 334 k~~kDvv~~M~~~m~sMg~yiV~~FfaaQFva~FnwSn~G~~~AV~GA~~L~~~gl~g~~lil~~illsa~inL~IgSAS 413 (516)
T COG2978 334 KNDKDVVNMMAESMSSMGGYIVIAFFAAQFVAFFNWSNLGTIMAVKGADFLKAIGLTGLPLILGFILLSAFINLFIGSAS 413 (516)
T ss_pred eccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcccccchhheechHhHHHHcCCCCcHHHHHHHHHHHHHHHHHhhHH
Confidence 36778888788877777777777777777788899999999998643 223566678888889999999998877
Q ss_pred HH-HHHHHHH----HHh-CCChhHHHHHHHHHHHHHhhccccccccchhhhhh----H--hcc--cCChHHHHHHhhHHH
Q 045863 263 ST-IVMVSLL----RKL-VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTML----W--IHG--QISTLPTMKSLFIPS 328 (537)
Q Consensus 263 a~-~im~PI~----~~l-~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~----~--~~~--~isf~~~~~~~~pp~ 328 (537)
+- .++.||. ..+ .+|+-.+ .+|= +|-..|-+=+|.+... . ... +.+....+..+.|..
T Consensus 414 AkWailaPIfVPMlMllGysPe~tQ------aayR--igDS~tniiTPlm~yfpLil~~~~kY~k~~GvGTL~s~mLPYs 485 (516)
T COG2978 414 AKWAILAPIFVPMLMLLGYSPEFTQ------AAYR--IGDSVTNIITPLMPYFPLILAYAQKYDKDAGVGTLMSMMLPYS 485 (516)
T ss_pred HHHHHHhhHHHHHHHHhcCCHHHHH------HHHH--hcccccccccchhhhHHHHHHHHHHhCcCccHHHHHHHhhhHH
Confidence 76 6666664 344 3554332 2221 2333343333333221 1 111 455567777777776
Q ss_pred HHHHH
Q 045863 329 AVSLA 333 (537)
Q Consensus 329 lv~l~ 333 (537)
+..++
T Consensus 486 i~f~i 490 (516)
T COG2978 486 IAFLI 490 (516)
T ss_pred HHHHH
Confidence 65444
No 126
>COG2610 GntT H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]
Probab=87.14 E-value=51 Score=36.13 Aligned_cols=83 Identities=13% Similarity=0.106 Sum_probs=50.9
Q ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHH-----H
Q 045863 191 TEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTST-----I 265 (537)
Q Consensus 191 ~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~ 265 (537)
.++.-+.++++++.....++-..+.-.+.+.+.++|++|.++..+.+.+...++ .-.+++..+.....+.|+. .
T Consensus 286 ~~~~~~~~~~~i~~~~~ilLitgaggafg~Vl~~sg~g~~la~~l~~~~~~pil-~~~iia~~lr~a~GSaTva~~tA~~ 364 (442)
T COG2610 286 KNTLMESLESALKPIAMILLITGAGGAFGQVLADSGVGDYLASLLSGTGLSPLL-LAFIVAALLRIATGSATVAMITAAG 364 (442)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhhHhhhhHHHhcchhHHHHHHHHhCCCChHH-HHHHHHHHHHHHhcccHHHHHHHHH
Confidence 444444455555555566666777788899999999999999999764322222 2233445566665554444 3
Q ss_pred HHHH-HHHHh
Q 045863 266 VMVS-LLRKL 274 (537)
Q Consensus 266 im~P-I~~~l 274 (537)
++.| +....
T Consensus 365 i~a~~~l~~~ 374 (442)
T COG2610 365 IVAPPLLAQL 374 (442)
T ss_pred HHHHHHHHhc
Confidence 4445 54444
No 127
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=86.95 E-value=27 Score=38.07 Aligned_cols=82 Identities=11% Similarity=0.088 Sum_probs=61.4
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHH-----HHHHHHhc-CCchHHHHHHHHHHHHHHhhccchhH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFK-----LVTDNITT-RKPRTLLWVIGFVTFFLSSILDNLTS 263 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~-----ria~~l~~-~~~~~l~~~l~l~~~~lS~fl~N~ta 263 (537)
++++..+.+.++.++....++.+...--+...++++|+.+ .+++.+.+ .+........++.+.++.-|+++-..
T Consensus 293 tp~~~~~a~~~g~~~~~gi~l~fpf~agI~~im~~s~l~~~~ls~~la~~lvs~a~~~~f~l~~~l~~~liNfFIPSGsG 372 (438)
T TIGR00366 293 TPMAYMRAITRAARSVAGILVQFPFYAGIMGMMEHSGVGGGGPATLITEFFINVANKDTFPLMTFFSAGLINIFIPSGGG 372 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccchHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhcccCchH
Confidence 6778777787777777777777777777777889999999 88887766 35566667777899999999976655
Q ss_pred H-HHHHHHH
Q 045863 264 T-IVMVSLL 271 (537)
Q Consensus 264 ~-~im~PI~ 271 (537)
= ++..|++
T Consensus 373 qwai~aPIm 381 (438)
T TIGR00366 373 HWAIQGPIV 381 (438)
T ss_pred HHHHHHHHH
Confidence 4 4555554
No 128
>PF02690 Na_Pi_cotrans: Na+/Pi-cotransporter; InterPro: IPR003841 This family includes the mammalian type II renal Na+/Pi-cotransporters and other proteins from lower eukaryotes and bacteria some of which are also Na+/Pi-cotransporters. In the kidney these proteins may be involved in actively transporting phosphate into cells via Na+ cotransport in the renal brush border membrane [].; GO: 0015321 sodium-dependent phosphate transmembrane transporter activity, 0044341 sodium-dependent phosphate transport, 0016020 membrane
Probab=86.94 E-value=5.3 Score=36.71 Aligned_cols=87 Identities=16% Similarity=0.134 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHHHHHHHhH-chHHHHHHHHhhhhccCCCCChHHHHHHHHHHH
Q 045863 434 FFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAIGVVSAVI-DNVPLVAATMGMYDLTSFPQDSKFWQLIAYCAG 512 (537)
Q Consensus 434 ~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~~~lS~~i-sNtp~va~llpv~~~~~~~~~~~~~laLa~~a~ 512 (537)
++.|+-.+..++++..- +.+-+.+....++++..+++..+++.++ |+++.+...++.... +. .+....+.+.+|+|
T Consensus 2 ~l~gl~~l~~~l~~~~~-~~~~~~l~~~~~~~~~~~l~G~~~T~l~QSSsa~~~i~v~l~~~-g~-l~~~~al~~ilGaN 78 (142)
T PF02690_consen 2 FLFGLRLLSSGLKPLAG-PRLRALLARLTSNPLLAFLLGALLTALVQSSSAVTLIVVSLVAA-GV-LSLEQALAIILGAN 78 (142)
T ss_pred HhhHHHHHHHHHHHHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHh-cc-cCHHHHHHHHHhhh
Confidence 56778888888887655 5566666666666665556666666655 556666766776631 11 13456678899999
Q ss_pred HhhhhhHHhHH
Q 045863 513 TGGSMLIIGSA 523 (537)
Q Consensus 513 iGg~lTpiGS~ 523 (537)
+|..+|..=.+
T Consensus 79 iGtt~~~~l~a 89 (142)
T PF02690_consen 79 IGTTITALLAA 89 (142)
T ss_pred HHHHHHHHHHH
Confidence 99987765544
No 129
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=85.94 E-value=58 Score=35.61 Aligned_cols=100 Identities=12% Similarity=0.010 Sum_probs=56.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcHHH-----HHHHHHHhhhhhh---HHHHHHHHHHHHhH-chHHHHHHHHhhhh----c
Q 045863 428 DTQGALFFLGILLSVSSLEAAGLLR-----EIANYLDAHISNI---DLIASAIGVVSAVI-DNVPLVAATMGMYD----L 494 (537)
Q Consensus 428 ~W~tLl~f~glf~l~~~L~~tG~~~-----~la~~l~~~i~~~---~~i~~i~~~lS~~i-sNtp~va~llpv~~----~ 494 (537)
.--..+.|++.+ ...++++|+.+ .+++.+.+..+.. ..+++..+++.-|+ |.....++.+|++. .
T Consensus 310 gi~l~fpf~agI--~~im~~s~l~~~~ls~~la~~lvs~a~~~~f~l~~~l~~~liNfFIPSGsGqwai~aPImvP~a~~ 387 (438)
T TIGR00366 310 GILVQFPFYAGI--MGMMEHSGVGGGGPATLITEFFINVANKDTFPLMTFFSAGLINIFIPSGGGHWAIQGPIVIPAAQA 387 (438)
T ss_pred HHHHHHHHHHHH--HHHHcCCCCccchHHHHHHHHHHhhCCccHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHHH
Confidence 334444455554 45678888888 7777776643222 12345556666555 44666677778762 2
Q ss_pred cCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHHHh
Q 045863 495 TSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAFMG 530 (537)
Q Consensus 495 ~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~~g 530 (537)
.|.. +....++..+|-+..-.++|.=..|-+-+.|
T Consensus 388 LGvs-~~~tv~Ay~~GD~~tNlI~PfWaLP~L~i~g 422 (438)
T TIGR00366 388 LGVD-LGKSVMAIAYGDAWTNMAQPFWALPALGIAG 422 (438)
T ss_pred cCCC-HHHHHHHHHHHhHhHHHhhHHHHHHHHHHcC
Confidence 4443 2333344455555554577776666555554
No 130
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=85.88 E-value=60 Score=35.67 Aligned_cols=64 Identities=14% Similarity=0.185 Sum_probs=36.4
Q ss_pred CHHHHHHHhhhhhccchhHHHH---HHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHh
Q 045863 190 STEIAVSELSRASAEVSEIVFF---LLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSS 256 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~l---i~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~ 256 (537)
++-+..+...+ ++++.+-| ..-..+.+.++.++-..+|+-+++.+ +++++-...+.+++.+.|-
T Consensus 42 ~p~~~v~~Wg~---GfW~LL~F~MQM~LilvtG~~lA~sp~v~r~l~~lA~~p~t~~~Ai~lv~~vs~i~s~ 110 (453)
T PF02667_consen 42 SPLEMVEAWGD---GFWSLLAFAMQMALILVTGYALASSPPVKRLLDRLASLPKTPRQAIVLVALVSMIASW 110 (453)
T ss_pred CHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHhcCCCCcceeeHHHHHHHHHHH
Confidence 45555554443 44443322 12223566778888888888888865 4666655555555444443
No 131
>COG4664 FcbT3 TRAP-type mannitol/chloroaromatic compound transport system, large permease component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.53 E-value=38 Score=35.80 Aligned_cols=156 Identities=21% Similarity=0.207 Sum_probs=100.3
Q ss_pred cchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLL 244 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~ 244 (537)
-..++.+-.|+.++.... +..+.+...+......+.-+-.+|.+.|+-.++..+.-.|-..|+=.++.. +.+.+.+
T Consensus 258 TE~gA~G~~GA~~LA~~~--~~l~w~~~~~a~~~T~k~tsmV~~IllGa~~FSlvF~g~~G~~~ve~~l~~lpgg~igFl 335 (447)
T COG4664 258 TEGGAVGAVGALLLALAN--GRLNWQMVKQALDATAKLTSMVLFILLGATVFSLVFYGLNGHAWVEHLLTNLPGGEIGFL 335 (447)
T ss_pred cccchhhHHHHHHHHHHh--CcccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhheeecCchHHHHHHHhcCCCCceeee
Confidence 456667777777765543 222555444443332233347788999999999999999999998888864 5677888
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHH----HHHh-CCChhHHHHHHHHHHHHHhh-cccccc-ccchhhhhhHh--cccC
Q 045863 245 WVIGFVTFFLSSILDNLTSTIVMVSL----LRKL-VPPSEYRKLLGAVVVIAANA-GGAWTP-IGDVTTTMLWI--HGQI 315 (537)
Q Consensus 245 ~~l~l~~~~lS~fl~N~ta~~im~PI----~~~l-~~p~~~~~~~l~~va~aan~-Gg~~Tp-iG~~~Nll~~~--~~~i 315 (537)
.....+.+++.-|+|-.-.+.+.+|+ ++++ ++... ..+..+.|. ++.++| .|-.-= +.-+ .-..
T Consensus 336 i~~~~~iF~LgffldffEiafIivPllaPva~~lgIDliw------fGVll~~NlQtSFl~PPfgfslf-YLrgVAp~~V 408 (447)
T COG4664 336 IVSNILIFFLGFFLDFFEIAFIIVPLLAPVADKLGIDLIW------FGVLLGVNLQTSFLHPPFGFSLF-YLRGVAPPSV 408 (447)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCCcHHH------HHHHHHHhhhhhccCCCchhhHH-HhccCCCCCc
Confidence 88888889999999988877776665 4566 34322 367778888 777775 442211 1111 1246
Q ss_pred ChHHHHHHhhHHHHHH
Q 045863 316 STLPTMKSLFIPSAVS 331 (537)
Q Consensus 316 sf~~~~~~~~pp~lv~ 331 (537)
+-.|-.+-+.|..++-
T Consensus 409 Tt~qIy~G~vPfiliq 424 (447)
T COG4664 409 TTGQIYRGAVPFILIQ 424 (447)
T ss_pred chhhhhhccccHHHHH
Confidence 6666555555544433
No 132
>PRK09821 putative transporter; Provisional
Probab=85.50 E-value=63 Score=35.61 Aligned_cols=103 Identities=10% Similarity=0.019 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHHH--HHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHH
Q 045863 168 NKSGVGLLMAVSLWI--VRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLW 245 (537)
Q Consensus 168 p~~~val~~~~~l~v--~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~ 245 (537)
..+.+|++.+++..+ +|.-...+.++..+.+++++.....+++...+.=.+.+.++++|+.|.++..+.+.+-..++.
T Consensus 275 G~p~iALlig~l~A~~~lg~~~~~~~~~~~~~~~~al~~~g~IlLItgaGGafg~VL~~sgig~~i~~~~~~~~l~~lll 354 (454)
T PRK09821 275 GSPMVALLIALVLAFWLLALRRGWSLQHTSDVMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIHLPLIPA 354 (454)
T ss_pred CCHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHHhhhHhheeecChHHHHHHHHHCCHHHHHHHHHHhCCCcHHHH
Confidence 334666666555543 322111133444444556555555666655555899999999999999999987654333333
Q ss_pred HHHHHHHHHHhhccch-----hHHHHHHHHH
Q 045863 246 VIGFVTFFLSSILDNL-----TSTIVMVSLL 271 (537)
Q Consensus 246 ~l~l~~~~lS~fl~N~-----ta~~im~PI~ 271 (537)
.+. +++++-....+. |++.++.|+.
T Consensus 355 ~fl-IAa~lr~aqGSaTVA~iTaa~i~ap~~ 384 (454)
T PRK09821 355 AFI-ISLALRASQGSATVAILTTSGLLSEAV 384 (454)
T ss_pred HHH-HHHHHHHhhchHHHHHHHHHHHHHHHh
Confidence 333 334443333333 3336667775
No 133
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=84.76 E-value=47 Score=36.47 Aligned_cols=108 Identities=10% Similarity=0.009 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHhChHHHHHHHHhc-CCchHHHHHHHHHHHHHHhhccchhHH-----HHHHHHHHHhC-CChhHHHHH
Q 045863 212 LLGAMTIVEIVDAHQGFKLVTDNITT-RKPRTLLWVIGFVTFFLSSILDNLTST-----IVMVSLLRKLV-PPSEYRKLL 284 (537)
Q Consensus 212 i~g~~ii~~~l~~tGl~~ria~~l~~-~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~im~PI~~~l~-~p~~~~~~~ 284 (537)
|+|+|.- .++...++.+.++++++. .++..+-...++.++++.-|+++-.-= -+++|-.++++ ++.+.
T Consensus 324 ImGmm~~-sgl~g~sLa~~is~~fvsiat~~TfP~~~flsagivn~FVPSGGGqWaVqgP~~~~Aa~~Lgv~~~~~---- 398 (453)
T PF02667_consen 324 IMGMMTG-SGLGGVSLAQVISNFFVSIATPTTFPLFTFLSAGIVNFFVPSGGGQWAVQGPIVMPAAQALGVDLGKT---- 398 (453)
T ss_pred HHHHHhh-cCCCcchHHHHHHHHHHHhcCCccHHHHHHHHHHHheeEecCCCceEEEecchHHHHHHHhCCCHHHH----
Confidence 4555542 234444477799999876 466677777888888888888876543 45555556663 33222
Q ss_pred HHHHHHHHhhccccccccchhhhh-------hHhcccCChHHHHHHhhHHHHHHHHH
Q 045863 285 GAVVVIAANAGGAWTPIGDVTTTM-------LWIHGQISTLPTMKSLFIPSAVSLAV 334 (537)
Q Consensus 285 l~~va~aan~Gg~~TpiG~~~Nll-------~~~~~~isf~~~~~~~~pp~lv~l~v 334 (537)
.|+.+++-.. +|++ +-+..|++..|.+-+.....++..++
T Consensus 399 ~ma~a~Gda~----------tNmiQPFWaLPlL~I~GL~aRDImGy~~~~ll~~~~i 445 (453)
T PF02667_consen 399 VMAYAWGDAW----------TNMIQPFWALPLLGIAGLKARDIMGYCVVILLVSGII 445 (453)
T ss_pred HHHHHHHHHH----------HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 3555555433 4543 12235888888887776666555443
No 134
>COG2978 AbgT Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism]
Probab=82.40 E-value=84 Score=34.61 Aligned_cols=86 Identities=17% Similarity=0.146 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHHHHHHHHH----HHhCCChhHHH
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLL----RKLVPPSEYRK 282 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~----~~l~~p~~~~~ 282 (537)
+.+-.++..++=...-|++|+++.+-+++.++.+++++.-..+..+++|...+ +++..++.|+. .+++ .++..
T Consensus 90 pPLG~VLv~mLGigvAE~SGll~alm~~~~~~~pk~llt~~vvfigi~s~~as-DaayVVlpPlaAmiF~a~G-RHPlA- 166 (516)
T COG2978 90 PPLGTVLVVMLGIGVAERSGLLSALMRKLLNKVPKRLLTFTVVFIGILSHIAS-DAAYVVLPPLAAMIFIALG-RHPLA- 166 (516)
T ss_pred CchHHHHHHHHhhhhhhhcccHHHHHHHHHhhcchHHHhhHHHHHHHHHHHHh-hcceeEecchHHHHHHHhC-CCcHH-
Confidence 44445555555566779999999999999888888888777777777766543 34445666765 3333 23332
Q ss_pred HHHHHHHHHHhhccc
Q 045863 283 LLGAVVVIAANAGGA 297 (537)
Q Consensus 283 ~~l~~va~aan~Gg~ 297 (537)
.++.+|+...||.
T Consensus 167 --GlaaafAgvsgGf 179 (516)
T COG2978 167 --GLAAAFAGVSGGF 179 (516)
T ss_pred --HHHHHHhhccccc
Confidence 3467777766655
No 135
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=81.27 E-value=15 Score=39.11 Aligned_cols=99 Identities=10% Similarity=0.085 Sum_probs=64.5
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH--------HHHHHHHHHHHhHchHHHH-HHHHhhhhc-
Q 045863 425 SRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID--------LIASAIGVVSAVIDNVPLV-AATMGMYDL- 494 (537)
Q Consensus 425 ~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~--------~i~~i~~~lS~~isNtp~v-a~llpv~~~- 494 (537)
.+.|||+++...+...-++.|+.+|-+|++.+.-.+.+..++ .+.++-.++.. |.|+ ..++|++..
T Consensus 40 g~~PidVilII~aVi~a~a~lQaaGGlDylV~~Aek~LRk~Pk~It~lAP~vt~~~T~~~G----Tgh~a~s~lPVI~eV 115 (364)
T PF03605_consen 40 GSPPIDVILIIMAVITAAAALQAAGGLDYLVQIAEKILRKNPKYITFLAPLVTYLFTFLAG----TGHVAYSLLPVIAEV 115 (364)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHhCCCcEEEehhHHHHHHHHHhc----ccHHHHHhhHHHHHH
Confidence 368999999999999999999999999999988877774332 22233333333 5555 556899742
Q ss_pred ---cCCCCChHHHHHHHHHHHHhhhhhHHhHHHHHHH
Q 045863 495 ---TSFPQDSKFWQLIAYCAGTGGSMLIIGSAAGVAF 528 (537)
Q Consensus 495 ---~~~~~~~~~~laLa~~a~iGg~lTpiGS~an~i~ 528 (537)
.+.-...++.. -..++.++=...|++++.-.++
T Consensus 116 A~~~~IRPeRPls~-svvASq~aItaSPiSAA~~~~~ 151 (364)
T PF03605_consen 116 AKENGIRPERPLSI-SVVASQIAITASPISAATVAMI 151 (364)
T ss_pred HHHcCCCCCCchHH-HHHHHhcchhcCcHHHHHHHHH
Confidence 23221223222 2456667777788886554443
No 136
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=81.16 E-value=55 Score=33.87 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=65.2
Q ss_pred HHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH------HHHHHHHHHHHhHchHHHHHHHHhh--h
Q 045863 421 PQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID------LIASAIGVVSAVIDNVPLVAATMGM--Y 492 (537)
Q Consensus 421 ~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~------~i~~i~~~lS~~isNtp~va~llpv--~ 492 (537)
++.++.+.|..++=-. +-+++....+.|+-+.+++.+.+.++... ..++.-++.+.++.|--.+...+-. -
T Consensus 154 ~Rll~~vG~a~iLPQl-LAaLG~vF~~AGVG~vIa~lv~~viP~g~~~~~ViaYclGMalFTmIMGNAFAAF~ViTaGIG 232 (308)
T PF06166_consen 154 RRLLDQVGWAAILPQL-LAALGAVFTAAGVGDVIASLVSSVIPEGNRFIGVIAYCLGMALFTMIMGNAFAAFPVITAGIG 232 (308)
T ss_pred HHHHHHhhHHHHHHHH-HHHHHHHHHhcCccHHHHHHHHhhcCCCCeehhHHHHHHHHHHHHHHHccHHHHhHHHHhccC
Confidence 3455678897765221 23346778999999999999999886432 1244458888888886444322211 0
Q ss_pred -h--ccCCCCChHHHHHHHHHHHHhhh-hhHHhHHHHH
Q 045863 493 -D--LTSFPQDSKFWQLIAYCAGTGGS-MLIIGSAAGV 526 (537)
Q Consensus 493 -~--~~~~~~~~~~~laLa~~a~iGg~-lTpiGS~an~ 526 (537)
. ..+.+.++...-++.+-++.-|. +||.++==|+
T Consensus 233 iPfvi~~~GgnPaivgAlgM~aGyCGTLmTPMAANFNi 270 (308)
T PF06166_consen 233 IPFVIAQFGGNPAIVGALGMTAGYCGTLMTPMAANFNI 270 (308)
T ss_pred ceEEEecCCCCHHHHHHHHHhhcchhcccChhhhhcCc
Confidence 0 12334455666677777775444 7999865444
No 137
>PF06149 DUF969: Protein of unknown function (DUF969); InterPro: IPR010374 This is a family of uncharacterised bacterial membrane proteins.
Probab=80.12 E-value=64 Score=31.81 Aligned_cols=172 Identities=9% Similarity=0.006 Sum_probs=90.2
Q ss_pred HHHHHHhhcccCcchHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHH
Q 045863 155 GYTGIIFEESLAFNKSGVGLLMAVSLWIVRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDN 234 (537)
Q Consensus 155 ~i~~ii~e~~l~ip~~~val~~~~~l~v~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~ 234 (537)
.++++.++- =|..++...+.+--++.| .++.+..+.++++... +..+-+++-.+.+...+|+.|+=+|-...
T Consensus 10 IvvGFalk~---d~ilVV~vAgivTgLvaG----~~~~~iL~~lG~aFv~-nR~mslf~l~LPvIGllER~GLke~A~~l 81 (218)
T PF06149_consen 10 IVVGFALKL---DPILVVLVAGIVTGLVAG----MSFVEILETLGKAFVD-NRYMSLFILTLPVIGLLERYGLKERAANL 81 (218)
T ss_pred HHhhHHHhc---cchhhhHHHHHHHHHHcC----CCHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 345666665 344444444433333333 2677777766653211 13333344448888999999999999888
Q ss_pred Hhc--C-CchHHHHHHHHHHHHHHhh------ccchhHHHHHHHHHHHh-----C--CChh--HHHHHHHHHHHHHhhcc
Q 045863 235 ITT--R-KPRTLLWVIGFVTFFLSSI------LDNLTSTIVMVSLLRKL-----V--PPSE--YRKLLGAVVVIAANAGG 296 (537)
Q Consensus 235 l~~--~-~~~~l~~~l~l~~~~lS~f------l~N~ta~~im~PI~~~l-----~--~p~~--~~~~~l~~va~aan~Gg 296 (537)
+.| + +.-+++..-.++=-+.+++ ..-..++-++.|++... . +++. ..|.+ .+-.=|.|-
T Consensus 82 I~kik~aT~Gril~~Yl~iR~i~aa~gl~~lGGh~QfVRPLi~PMaeaAae~~~g~l~e~~~e~ika~---aAA~eN~gn 158 (218)
T PF06149_consen 82 IGKIKGATAGRILSVYLLIREIAAAFGLTRLGGHAQFVRPLIAPMAEAAAEAKYGELSEKDREKIKAM---AAAAENYGN 158 (218)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHhCCcccCCCCccccchhhhHHHHHHhhccCCCCHhHHHHHHHH---HHHHHHHHH
Confidence 854 3 3333333333332222222 12345668888997432 1 2111 11222 122222221
Q ss_pred ccccccchhhhhhHh-------------cccCChHHHHHHhhHHHHHHHHHHHHHHHhh
Q 045863 297 AWTPIGDVTTTMLWI-------------HGQISTLPTMKSLFIPSAVSLAVPLAFLSLT 342 (537)
Q Consensus 297 ~~TpiG~~~Nll~~~-------------~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~ 342 (537)
+ . .+|+.++. ..+.+-.+-..+..|..++++++..+..+++
T Consensus 159 -F--F--gqniFva~~gvLLi~gtl~~~G~~v~~~~ia~~~IP~Ai~a~ii~~~~~~~~ 212 (218)
T PF06149_consen 159 -F--F--GQNIFVAAGGVLLIQGTLKELGYEVEPLHIALWAIPTAIIAFIIHGIRLYLF 212 (218)
T ss_pred -H--H--hHHHHHhccceeeeeeeHHhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 13333222 2356677888888999998888777666554
No 138
>COG3067 NhaB Na+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=78.75 E-value=7.4 Score=40.65 Aligned_cols=166 Identities=16% Similarity=0.146 Sum_probs=95.2
Q ss_pred cchHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHH
Q 045863 167 FNKSGVGLLMAVSLWIVRS-IGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLW 245 (537)
Q Consensus 167 ip~~~val~~~~~l~v~gv-i~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~ 245 (537)
+..+.++++|..+..+... -|..+....-++|.++ -+.--++.--|-++..+.+..+|..|-......+...-.-
T Consensus 318 lHlA~VGliGLsvIilaTsftGvt~EH~iGkAFqEs----LPFTALL~VFFsvVAVIidQ~LF~PiIqfVL~a~~~~Ql~ 393 (516)
T COG3067 318 LHLAEVGLIGLSVIILATSFTGVTDEHAIGKAFQES----LPFTALLTVFFSVVAVIIDQHLFSPIIQFVLQASEHAQLS 393 (516)
T ss_pred HHHHHHhhhhhHHHHHHHhhcCCcchhhhHHHHHhc----CcHHHHHHHHHHHHHHHHHhhhhHHHHHHHHcCCcccchh
Confidence 6677888887665544221 1211332222233332 2555555556677777788889999998887665666677
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHh-----CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHh-----cccC
Q 045863 246 VIGFVTFFLSSILDNLTSTIVMVSLLRKL-----VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWI-----HGQI 315 (537)
Q Consensus 246 ~l~l~~~~lS~fl~N~ta~~im~PI~~~l-----~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~-----~~~i 315 (537)
.+++...++|+..||+-+.-+.+-=+|+. +.++++. .+..++.-+.|.-+..||=|-..=+.... -.++
T Consensus 394 lfyifNGLLS~iSDNVFV~TvYInE~k~Al~~G~is~~qfe-lLaVAINTGTNLPSVATPNGQAAFLFLLTSalaPLiRL 472 (516)
T COG3067 394 LFYIFNGLLSSISDNVFVGTIYINEAKAALEAGAISLKQFE-LLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRL 472 (516)
T ss_pred HHHHHhhHHHhhccceEEEEEEehhHHHHHHcCCcCHHhhh-HhhehhhcCCCCCcccCCCchhhHHHHHHhhhhHHHhh
Confidence 78888999999999986554333222322 2333332 12233444555556677766554433222 1256
Q ss_pred ChHHHHHHhhHHHHHHHHHHHH
Q 045863 316 STLPTMKSLFIPSAVSLAVPLA 337 (537)
Q Consensus 316 sf~~~~~~~~pp~lv~l~v~~~ 337 (537)
|........+|..++..++.++
T Consensus 473 SYGRMV~MAlPYTlvl~~iGll 494 (516)
T COG3067 473 SYGRMVWMALPYTLVLTLVGLL 494 (516)
T ss_pred hhcceeeeeccHHHHHHHHHHH
Confidence 6655554566777766665554
No 139
>PF13726 Na_H_antiport_2: Na+-H+ antiporter family
Probab=77.93 E-value=32 Score=29.15 Aligned_cols=48 Identities=6% Similarity=-0.008 Sum_probs=39.4
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhc
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITT 237 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~ 237 (537)
+.+|..+.+.+++.+..++-+--+..=.++.++.+||+-+.+++++.+
T Consensus 38 ~l~~t~~~~~~Gmgg~a~~ALSY~lLGafA~aIs~sGl~~~L~~~i~~ 85 (88)
T PF13726_consen 38 GLGETMSAFIDGMGGNAETALSYILLGAFAVAISKSGLTDILAKKIIK 85 (88)
T ss_pred CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 677777777787877777777777777788999999999999998865
No 140
>COG3817 Predicted membrane protein [Function unknown]
Probab=77.51 E-value=72 Score=32.34 Aligned_cols=120 Identities=12% Similarity=0.106 Sum_probs=63.6
Q ss_pred HHHHHHHHhChHHHHHHHHhc---CCchHHHHH-HHHHHHHHHhhccchhHH------HHHHHHH-HHh-CCChhHHHHH
Q 045863 217 TIVEIVDAHQGFKLVTDNITT---RKPRTLLWV-IGFVTFFLSSILDNLTST------IVMVSLL-RKL-VPPSEYRKLL 284 (537)
Q Consensus 217 ii~~~l~~tGl~~ria~~l~~---~~~~~l~~~-l~l~~~~lS~fl~N~ta~------~im~PI~-~~l-~~p~~~~~~~ 284 (537)
.++..+...|.+|-++..+.. .+.|-+... -++--++.++.|.|.-++ .+-+|+. -.+ .+|--
T Consensus 176 aLG~vFa~aGvG~~ia~L~~~~i~~DsrfiaV~~Y~vgMalfTmiMGNaFAAFpViTagIgvPilv~q~ganPaV----- 250 (313)
T COG3817 176 ALGAVFASAGVGDVIAHLISEIIPADSRFIAVAAYCVGMALFTMIMGNAFAAFPVITAGIGVPILVGQLGANPAV----- 250 (313)
T ss_pred HHHHHHHhcchhHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHcccchhceeeecccccceeeeccCCChHH-----
Confidence 355667888999999987743 344444333 334456678888887665 3334643 233 34421
Q ss_pred HHHHHHHH-hhccccccccchhhhhhHhcccCCh-HHHHHHhhHHHHHHHHHHHHHHHh
Q 045863 285 GAVVVIAA-NAGGAWTPIGDVTTTMLWIHGQIST-LPTMKSLFIPSAVSLAVPLAFLSL 341 (537)
Q Consensus 285 l~~va~aa-n~Gg~~TpiG~~~Nll~~~~~~isf-~~~~~~~~pp~lv~l~v~~~ll~~ 341 (537)
.-++.+-+ -||-.+||...-=|++-+.-.+++= ..-.|.-.|-.++.++.-++++|+
T Consensus 251 ~~AigM~sGfCGTLlTPMAANFN~vPAALlel~DknaVIKaQ~ptalvlli~ni~Lmyf 309 (313)
T COG3817 251 AGAIGMLSGFCGTLLTPMAANFNIVPAALLELKDKNAVIKAQAPTALVLLIANIFLMYF 309 (313)
T ss_pred HHHHHHHhhhhhhccChhhhhcCcchHHHhCCccccceeeeccchhhHHHHHHHHHHHH
Confidence 11233322 2455688876655554333222211 112344556666666666655655
No 141
>PRK10034 fructuronate transporter; Provisional
Probab=76.46 E-value=1.3e+02 Score=33.21 Aligned_cols=97 Identities=4% Similarity=0.061 Sum_probs=53.4
Q ss_pred cchHHHHHHHHHHHHH--HHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHH
Q 045863 167 FNKSGVGLLMAVSLWI--VRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLL 244 (537)
Q Consensus 167 ip~~~val~~~~~l~v--~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~ 244 (537)
+..+.+|++..++..+ +|.-...+.++..+.++++++....+++.+.+.=.+.+.+.++|+.|.++..+.+.+-..++
T Consensus 262 iG~p~iALlig~l~a~~~lg~~~~~~~~~~~~~~~~~l~~~g~IlLitgaGGafg~vl~~sgi~~~i~~~~~~~~l~~ll 341 (447)
T PRK10034 262 IGSSPIAMFIAMVVAFVLFGTARGHDMQWVMNAFESAVKSIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYI 341 (447)
T ss_pred hCCHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhhhHhhheecChHHHHHHHHhCCHHHHHHHHHHhCCCCHHH
Confidence 3444666665555433 22111113334333345544444455555555559999999999999999998765433333
Q ss_pred HHHHHHHHHHHhhccchhHH
Q 045863 245 WVIGFVTFFLSSILDNLTST 264 (537)
Q Consensus 245 ~~l~l~~~~lS~fl~N~ta~ 264 (537)
.-.++++++.....+.|++
T Consensus 342 -l~fliaa~lr~aqGSaTVA 360 (447)
T PRK10034 342 -MAWLITVLIRLATGQGVVS 360 (447)
T ss_pred -HHHHHHHHHHHHHhHHHHH
Confidence 3333445555554444444
No 142
>COG2704 DcuB Anaerobic C4-dicarboxylate transporter [General function prediction only]
Probab=74.32 E-value=83 Score=33.68 Aligned_cols=42 Identities=21% Similarity=0.353 Sum_probs=26.6
Q ss_pred HHHHhcCCchHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHhCCC
Q 045863 232 TDNITTRKPRTLLWVIGFVTFFLSSILDNLTST-IVMVSLLRKLVPP 277 (537)
Q Consensus 232 a~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~-~im~PI~~~l~~p 277 (537)
+..+.+..|+.+... -++.|.++++.+++ .+++|+...++-|
T Consensus 325 ~~~lv~~~PW~~Ava----lF~vS~lv~SQaAT~~al~P~~lalGv~ 367 (436)
T COG2704 325 AGELVQTYPWLLAVA----LFFVSALVNSQAATAKALVPVALALGVP 367 (436)
T ss_pred HHHHHHcCcHHHHHH----HHHHHHHHhhHHHHHHHHHHHHHHcCCC
Confidence 333444555544444 35667788887777 5788998888543
No 143
>PRK14984 high-affinity gluconate transporter; Provisional
Probab=72.50 E-value=1.6e+02 Score=32.43 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHH--HHhcCCCCHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHH
Q 045863 169 KSGVGLLMAVSLWI--VRSIGAPSTEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWV 246 (537)
Q Consensus 169 ~~~val~~~~~l~v--~gvi~~~~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~ 246 (537)
.+.+|++.+++... +|.-...+.++..+..+++++....+++.+.+.=.+.+.+.++|+.|.++..+.+.+-..+++
T Consensus 261 ~p~iALlig~l~a~~~lg~~~~~~~~~~~~~~~~al~~~g~IlLI~gaGGafg~VL~~sgi~~~i~~~l~~~~l~~lll- 339 (438)
T PRK14984 261 DPVMATLIAVLIAMFTFGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLM- 339 (438)
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHhCCHHHHHHHHHHhCCCCHHHH-
Confidence 34666665554433 221111133444444555555554555556666999999999999999999997643322222
Q ss_pred HHHHHHHHHhhccchhHH-----HHHHHHHH
Q 045863 247 IGFVTFFLSSILDNLTST-----IVMVSLLR 272 (537)
Q Consensus 247 l~l~~~~lS~fl~N~ta~-----~im~PI~~ 272 (537)
=.++++++.....+.|++ .++.|+..
T Consensus 340 afliaallr~aqGSaTVA~itaa~I~ap~l~ 370 (438)
T PRK14984 340 AWSIAAVLRIALGSATVAAITAGGIAAPLIA 370 (438)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 233444444444443333 55667653
No 144
>PRK10420 L-lactate permease; Provisional
Probab=72.45 E-value=1.7e+02 Score=33.15 Aligned_cols=133 Identities=12% Similarity=0.120 Sum_probs=78.2
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhc--cchhHHHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSIL--DNLTSTIVM 267 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl--~N~ta~~im 267 (537)
+.++..+.+.+..+...+.++-+...+.++..|..+|...-++..+.. ......+.-=++ ..+-.|+ ||+.+-+++
T Consensus 390 ~~~~~~~~~~~t~k~~~~~~iti~~~vala~vm~~SGm~~~la~~~A~-~G~~yp~~aP~l-G~lG~FvTGS~TsSN~LF 467 (551)
T PRK10420 390 KPSDAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAH-TGHAFTFFSPFL-GWLGVFLTGSDTSSNALF 467 (551)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH-hCccHHHHHHHH-HhhhcccccccHHHHHHH
Confidence 566666666666666778889999999999999999999998887763 111111112222 3333443 555555777
Q ss_pred HHHH----HHhCCChhHHHHHHHHHHHHHhh-ccc-cccccchhhhhhHhc-ccC--ChHHHHHHhhHHHHHHHH
Q 045863 268 VSLL----RKLVPPSEYRKLLGAVVVIAANA-GGA-WTPIGDVTTTMLWIH-GQI--STLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 268 ~PI~----~~l~~p~~~~~~~l~~va~aan~-Gg~-~TpiG~~~Nll~~~~-~~i--sf~~~~~~~~pp~lv~l~ 333 (537)
.++= +++.-+ +. ...++|. ||. ...| +|+|+.++.. .++ .=.+.++..++++++..+
T Consensus 468 ~~lQ~~tA~~lgl~-~~-------li~Aaq~~Gg~~GkmI-spq~I~~a~a~vg~~G~Eg~ilr~t~~~~l~~~~ 533 (551)
T PRK10420 468 AALQATAAQQIGVS-DV-------LLVAANTTGGVTGKMI-SPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTC 533 (551)
T ss_pred HHHHHHHHHHcCCC-HH-------HHHHHHHHhhHHhhcc-CHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Confidence 7762 344322 22 1223333 333 4444 6899776542 121 235677777777765544
No 145
>PF02652 Lactate_perm: L-lactate permease; InterPro: IPR003804 L-lactate permease is an integral membrane protein probably involved in L-lactate transport.; GO: 0015129 lactate transmembrane transporter activity, 0015727 lactate transport
Probab=72.12 E-value=1.7e+02 Score=32.81 Aligned_cols=133 Identities=14% Similarity=0.127 Sum_probs=80.6
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhh-c-cchhHHHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSI-L-DNLTSTIVM 267 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~f-l-~N~ta~~im 267 (537)
+.++..+.+.+..+...+.++-+...+.++..|+.+|...-++..+.+ ......+.--++ ..+..| + +|+.+-+++
T Consensus 370 ~~~~~~~~~~~t~~~~~~~~i~~~~~~~~a~vm~~SGm~~~la~~~a~-~G~~yp~~aP~l-G~lG~FiTGS~T~SN~lF 447 (522)
T PF02652_consen 370 SPSQVREALKKTLKQLWPPAIAIIFFLALAYVMNYSGMTATLALALAA-TGAAYPFFAPFL-GWLGSFITGSNTSSNALF 447 (522)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-hCccHHHHHHHH-HHHhcccccchHHHHHHH
Confidence 566666666666666778899999999999999999999999998876 222222223333 334444 3 444555777
Q ss_pred HHHH----HHhCCChhHHHHHHHHHHHHHh-hccc-cccccchhhhhhHhc-ccC--ChHHHHHHhhHHHHHHHH
Q 045863 268 VSLL----RKLVPPSEYRKLLGAVVVIAAN-AGGA-WTPIGDVTTTMLWIH-GQI--STLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 268 ~PI~----~~l~~p~~~~~~~l~~va~aan-~Gg~-~TpiG~~~Nll~~~~-~~i--sf~~~~~~~~pp~lv~l~ 333 (537)
.++= +.+.-| +. ...++| .||. ...| +|+|+.++.. .+. .=.+-++..+|++++..+
T Consensus 448 ~~lQ~~~A~~lgl~-~~-------l~~Aaq~~Gg~~g~mI-sp~~i~~a~a~~g~~g~Eg~ilr~t~~~~l~~~~ 513 (522)
T PF02652_consen 448 GPLQVTTAQQLGLP-PL-------LIAAAQNVGGAMGNMI-SPQNIVAAAAAVGLSGKEGEILRKTLPPSLIYAL 513 (522)
T ss_pred HHHHHHHHHHcCCC-HH-------HHHHHHHHHHHHHhcc-CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 7763 333322 22 111222 2333 4444 6889766542 122 235678888888876555
No 146
>TIGR00704 NaPi_cotrn_rel Na/Pi-cotransporter. This model describes essentially the full length of an uncharacterized protein from Bacillus subtilis and correponding lengths of longer proteins from E. coli and Treponema pallidum. PSI-BLAST analysis converges to demonstrate homology to one other group of proteins, type II sodium/phosphate (Na/Pi) cotransporters. A well-conserved repeated domain in this family, approximately 60 residues in length, is also repeated in the Na/Pi cotransporters, although with greater spacing between the repeats. The two families share additional homology in the region after the first repeat, share the properly of having extensive hydrophobic regions, and may be similar in function.
Probab=71.90 E-value=35 Score=35.59 Aligned_cols=87 Identities=11% Similarity=0.065 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHchH-HHHHHHHhhhhccCCCCChHHHHHHHH
Q 045863 431 GALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAIGVVSAVIDNV-PLVAATMGMYDLTSFPQDSKFWQLIAY 509 (537)
Q Consensus 431 tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~~~lS~~isNt-p~va~llpv~~~~~~~~~~~~~laLa~ 509 (537)
.-+++.|+-.+.+++++. .-+.+-+.+.+..++++.-.+...+++.++.+. +++.+.+..+. .+. .+....+.+.+
T Consensus 11 lgl~l~Gl~~~~~~l~~~-~g~~~~~~l~~~t~~~~~a~l~G~~~Tal~QSSsa~t~i~i~lv~-~G~-l~~~~al~iil 87 (307)
T TIGR00704 11 VAFLLWGMHIVRTGVMRV-FGARLRTVLSRSTEKKPLAFLAGIGVTAIVQSSNATTVLVISFVA-AGV-LSLAPAIVIIL 87 (307)
T ss_pred HHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC-CCHHHHHHHHH
Confidence 345666777777777765 234555555555555555555666666666444 44444344432 121 13456678899
Q ss_pred HHHHhhhhhHH
Q 045863 510 CAGTGGSMLII 520 (537)
Q Consensus 510 ~a~iGg~lTpi 520 (537)
|+|+|..+|..
T Consensus 88 GANiGTt~t~~ 98 (307)
T TIGR00704 88 GANVGTTLTAR 98 (307)
T ss_pred HhhHHHHHHHH
Confidence 99999987653
No 147
>COG1283 NptA Na+/phosphate symporter [Inorganic ion transport and metabolism]
Probab=70.82 E-value=71 Score=35.82 Aligned_cols=92 Identities=10% Similarity=0.093 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHch-HHHHHHHHhhhhccCCCCChHHHHHH
Q 045863 429 TQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAIGVVSAVIDN-VPLVAATMGMYDLTSFPQDSKFWQLI 507 (537)
Q Consensus 429 W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~~~lS~~isN-tp~va~llpv~~~~~~~~~~~~~laL 507 (537)
.+.-+.|.++=.++.+++-..-.+.+.+.+......++..+++.+.++.++.. .+.+..+..... .+. .+.....++
T Consensus 138 ~GiGl~f~sl~l~~~a~~pl~~s~~~~~~i~~l~~~~~~~l~~g~~lt~l~~SS~A~i~i~~~l~~-~gl-is~~~~~al 215 (533)
T COG1283 138 FGIGLIFLSLELLGQATEPLRQSPAFSDFIAKLSDDPIVALLIGALLTALIQSSLAAIGILLSLTS-QGL-ISLEAALAL 215 (533)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhchhHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-Ccc-cchhHHHHH
Confidence 34444455555566666666666777776666555555555566666655533 444444433332 121 134566788
Q ss_pred HHHHHHhhhhhHHhH
Q 045863 508 AYCAGTGGSMLIIGS 522 (537)
Q Consensus 508 a~~a~iGg~lTpiGS 522 (537)
..|+|+|+.+|++..
T Consensus 216 vLGaNlGt~i~a~la 230 (533)
T COG1283 216 VLGANLGTTITAVLA 230 (533)
T ss_pred HHHHhhhchhHHHHH
Confidence 999999999888763
No 148
>PF02690 Na_Pi_cotrans: Na+/Pi-cotransporter; InterPro: IPR003841 This family includes the mammalian type II renal Na+/Pi-cotransporters and other proteins from lower eukaryotes and bacteria some of which are also Na+/Pi-cotransporters. In the kidney these proteins may be involved in actively transporting phosphate into cells via Na+ cotransport in the renal brush border membrane [].; GO: 0015321 sodium-dependent phosphate transmembrane transporter activity, 0044341 sodium-dependent phosphate transport, 0016020 membrane
Probab=70.24 E-value=15 Score=33.72 Aligned_cols=80 Identities=18% Similarity=0.309 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhChHHHHHHHHhc--CCchHHHHHHHHHHHHHHhhc-cchhHHHHHHHHHHHh-CCChhHHHHHHH
Q 045863 211 FLLGAMTIVEIVDAHQGFKLVTDNITT--RKPRTLLWVIGFVTFFLSSIL-DNLTSTIVMVSLLRKL-VPPSEYRKLLGA 286 (537)
Q Consensus 211 li~g~~ii~~~l~~tGl~~ria~~l~~--~~~~~l~~~l~l~~~~lS~fl-~N~ta~~im~PI~~~l-~~p~~~~~~~l~ 286 (537)
++.|+-.+++++++-.- +++-..+.+ +++ +.-.+..++++..+ ++++++.+.++++.+- .+.+. .+
T Consensus 2 ~l~gl~~l~~~l~~~~~-~~~~~~l~~~~~~~----~~~~l~G~~~T~l~QSSsa~~~i~v~l~~~g~l~~~~-----al 71 (142)
T PF02690_consen 2 FLFGLRLLSSGLKPLAG-PRLRALLARLTSNP----LLAFLLGALLTALVQSSSAVTLIVVSLVAAGVLSLEQ-----AL 71 (142)
T ss_pred HhhHHHHHHHHHHHHHH-HHHHHHHHHHcCCC----HHHHHHHHHHHHHhcchHHHHHHHHHHHHhcccCHHH-----HH
Confidence 57788888888887654 555555533 233 23334566677777 5566668888888653 33322 35
Q ss_pred HHHHHHhhcccccc
Q 045863 287 VVVIAANAGGAWTP 300 (537)
Q Consensus 287 ~va~aan~Gg~~Tp 300 (537)
++.+++|+|...+.
T Consensus 72 ~~ilGaNiGtt~~~ 85 (142)
T PF02690_consen 72 AIILGANIGTTITA 85 (142)
T ss_pred HHHHhhhHHHHHHH
Confidence 78999999876554
No 149
>TIGR00795 lctP L-lactate transport. The only characterized member of this family, from E. coli, appears to catalyze lactate:H+ uptake. Members of this family have 12 probable TMS.
Probab=69.25 E-value=1.6e+02 Score=33.15 Aligned_cols=134 Identities=13% Similarity=0.114 Sum_probs=78.4
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhc-cchhHHHHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSIL-DNLTSTIVMV 268 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl-~N~ta~~im~ 268 (537)
+.++..+.+.+..+...+.++.+...+.++..++.+|...-++..+.+ ......+.--++..+-+-++ ||+.+-+++.
T Consensus 376 ~~~~~~~~~~~t~k~~~~~~lt~~~~~~~a~vm~~sGm~~~la~~~A~-~G~~yp~~aP~iG~lG~FiTGS~TsSN~LFg 454 (530)
T TIGR00795 376 SISDAIGVFGETLKEMRLPILTIGMVLAFANVSNYSGMSKTLALALAH-TGLAFTFFSPFLGWLGVFLTGSDTSSNLLFG 454 (530)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH-hCCchHHHHHHHHhhhcccccchHHHHHHHH
Confidence 556666666666666667777888888899999999999999998875 22222222222333333333 4555557777
Q ss_pred HHH----HHhCCChhHHHHHHHHHHHHHhh-ccc-cccccchhhhhhHhc-ccC--ChHHHHHHhhHHHHHHHH
Q 045863 269 SLL----RKLVPPSEYRKLLGAVVVIAANA-GGA-WTPIGDVTTTMLWIH-GQI--STLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 269 PI~----~~l~~p~~~~~~~l~~va~aan~-Gg~-~TpiG~~~Nll~~~~-~~i--sf~~~~~~~~pp~lv~l~ 333 (537)
++= +.++-+ +. ...++|. ||. ...| +|+|+.++.. .++ .=.+.++..++++++..+
T Consensus 455 ~lQ~~tA~~lGl~-~~-------li~A~q~~Gg~~G~mI-sp~~I~~a~a~vg~~G~Eg~ilr~t~~~~l~~~i 519 (530)
T TIGR00795 455 SLQLLTAEQIGLP-ET-------LLLAANTVGGVMGKMI-SPQSIAIACAAVGLVGQESDLFRKTVKYSLIYAI 519 (530)
T ss_pred HHHHHHHHHcCCC-HH-------HHHHHHHHhHHHhhcc-CHHHHHHHHHHHccCCchhHHHHHHHHHHHHHHH
Confidence 762 334322 22 1222232 333 4444 6899776542 121 336778888888876655
No 150
>COG1620 LldP L-lactate permease [Energy production and conversion]
Probab=68.44 E-value=2e+02 Score=32.14 Aligned_cols=61 Identities=13% Similarity=0.016 Sum_probs=43.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhH-----HHHHHHHHHHHhHchHHHHHHHHhhh
Q 045863 428 DTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNID-----LIASAIGVVSAVIDNVPLVAATMGMY 492 (537)
Q Consensus 428 ~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~-----~i~~i~~~lS~~isNtp~va~llpv~ 492 (537)
-|.-++-....+.++..+..+|...-+++.+.+. +..+ .+.++..|+|. |||...+ ++.-+
T Consensus 378 ~~~p~lti~~~l~~~~l~~~SG~~~tla~~~A~~-G~~fp~fSp~lGwiG~FltG--S~T~sN~-lFg~l 443 (522)
T COG1620 378 LKLPILTIIFALAMAYLMNYSGLSKTLALALAHT-GEAFPLFSPFLGWIGVFLTG--SNTSSNL-LFGPL 443 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHccCchHHHHHHHHhc-CCCchhHhHHHHHHhhhhcc--cchHHHH-HHHHH
Confidence 4666777778888999999999999999999886 5443 34566666665 5665444 44443
No 151
>TIGR00704 NaPi_cotrn_rel Na/Pi-cotransporter. This model describes essentially the full length of an uncharacterized protein from Bacillus subtilis and correponding lengths of longer proteins from E. coli and Treponema pallidum. PSI-BLAST analysis converges to demonstrate homology to one other group of proteins, type II sodium/phosphate (Na/Pi) cotransporters. A well-conserved repeated domain in this family, approximately 60 residues in length, is also repeated in the Na/Pi cotransporters, although with greater spacing between the repeats. The two families share additional homology in the region after the first repeat, share the properly of having extensive hydrophobic regions, and may be similar in function.
Probab=68.02 E-value=1.5e+02 Score=30.84 Aligned_cols=90 Identities=12% Similarity=0.058 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHHHHHHHhH-chHHHHHHHHhhhhccCCCCChHHHHHH
Q 045863 429 TQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAIGVVSAVI-DNVPLVAATMGMYDLTSFPQDSKFWQLI 507 (537)
Q Consensus 429 W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~~~lS~~i-sNtp~va~llpv~~~~~~~~~~~~~laL 507 (537)
-+.-++|.|+-.+.++++...-.+++-+.+...-.+++...++..+++.++ |+.+.+...++.... +. .+.....++
T Consensus 134 ~G~gllf~gl~~m~~~~~pl~~~~~~~~~~~~l~~~~~~~~l~G~~lT~ivQSSsA~i~i~~~la~~-G~-i~~~~a~~l 211 (307)
T TIGR00704 134 IGLGLIFLALELISQLVTPLTQANGVQVIFASLTGSILLDLLIGAVLTIISHSSSAAVLITATLTAA-GI-IGFPVALCL 211 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CC-CCHHHHHHH
Confidence 344556666666766644333233333333332234444455556666666 445565665666531 11 144667788
Q ss_pred HHHHHHhhhhhHH
Q 045863 508 AYCAGTGGSMLII 520 (537)
Q Consensus 508 a~~a~iGg~lTpi 520 (537)
.+|+|+|...|.+
T Consensus 212 vlGaNiGT~~ta~ 224 (307)
T TIGR00704 212 VLGSNLGSGILAM 224 (307)
T ss_pred HHhcchhHHHHHH
Confidence 9999999988775
No 152
>PRK09695 glycolate transporter; Provisional
Probab=66.53 E-value=2.1e+02 Score=32.44 Aligned_cols=133 Identities=10% Similarity=0.077 Sum_probs=78.0
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhc--cchhHHHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSIL--DNLTSTIVM 267 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl--~N~ta~~im 267 (537)
+.++..+.+.+..+......+-+...+.++..++.+|...-++..+.. ......+.-=++ ..+-.|+ ||+.+-.++
T Consensus 398 ~~~~~~~~l~~t~k~~~~~~lti~~~vala~vm~~SGm~~~La~~~a~-~G~~yp~~aP~i-G~lG~FvTGS~TsSN~LF 475 (560)
T PRK09695 398 GIKKGIGVFAETLISLKWPILSIGMVLAFAFVTNYSGMSTTLALVLAG-TGVMFPFFSPFL-GWLGVFLTGSDTSSNALF 475 (560)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-hCccHHHHHHHH-hhhhcccccccHHHHHHH
Confidence 566666666666667777788899999999999999999999998853 111111111222 3333443 455555777
Q ss_pred HHHH----HHhCCChhHHHHHHHHHHHHHhh-ccc-cccccchhhhhhHhc-ccC--ChHHHHHHhhHHHHHHHH
Q 045863 268 VSLL----RKLVPPSEYRKLLGAVVVIAANA-GGA-WTPIGDVTTTMLWIH-GQI--STLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 268 ~PI~----~~l~~p~~~~~~~l~~va~aan~-Gg~-~TpiG~~~Nll~~~~-~~i--sf~~~~~~~~pp~lv~l~ 333 (537)
.++= +++.-+ +. ...++|. ||. ...| +|+|+.++.. .++ .=.+.++..++++++..+
T Consensus 476 ~~lQ~~tA~~lGl~-~~-------li~Aaq~~Gg~~GkmI-spq~I~~a~a~vgl~G~Eg~ilr~t~~~~l~~~~ 541 (560)
T PRK09695 476 GSLQSTTAQQINVS-DT-------LLVAANTSGGVTGKMI-SPQSIAVACAATGMVGRESELFRYTVKHSLIFAS 541 (560)
T ss_pred HHHHHHHHHHcCCC-HH-------HHHHHHHHhhHHhhcc-CHHHHHHHHHHHccCCchhHHHHHHHHHHHHHHH
Confidence 7762 344322 22 2223333 333 4444 6899776542 121 225677777777765544
No 153
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate []. The majority of proteins in this entry are known or predicted members of the citrate:cation symporter (CCS) family. They contain the predicted twelve-transmembrane helix motif common to many secondary transporters []. Most of the characterised proteins in this entry are specific for citrate, with either Na+ of H+ as the contransported cation. However, one member is capable of cotransporting either citrate or malate with H+ [], while another has been shown to be an Na+-dependent malate cotransporter [].; GO: 0008514 organic anion transmembrane transporter activity, 0015711 organic anion transport, 0016021 integral to membrane
Probab=63.38 E-value=2.3e+02 Score=30.90 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhhhhhccCchhhHHHHHHHHHHHHHHHHHHhhcccCcch--------HHHHHHHHHHHHHHHhcCCCC
Q 045863 119 LKALAVFAAAITGAVAINHSWVAANQDLAMALLFGIGYTGIIFEESLAFNK--------SGVGLLMAVSLWIVRSIGAPS 190 (537)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~l~IFv~~i~~ii~e~~l~ip~--------~~val~~~~~l~v~gvi~~~~ 190 (537)
+++.+++++.+..+.+...-|.+|- .-.++......+..++-++ +|. +..++++...++-.+.+
T Consensus 7 lp~f~~~~~iv~~~~~~~~lp~~m~-g~~a~~~v~G~~l~~IG~r---iPi~k~yiGGg~il~~f~ps~Lv~~~~i---- 78 (414)
T PF03390_consen 7 LPLFLILAAIVLAAIYTGKLPTDMI-GGFAVMMVLGFLLGEIGDR---IPILKDYIGGGAILCIFVPSALVYFGLI---- 78 (414)
T ss_pred HHHHHHHHHHHHHHHHhCcCCcchH-HHHHHHHHHHHHHHHHHhh---ChhhhccCChHHHHHHHHHHHHHHcCCC----
Confidence 3444444444443345556666555 3344444555566777777 662 45555666666656665
Q ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHHH
Q 045863 191 TEIAVSELSRASAEVSEIVFFLLGAMTIVEIV 222 (537)
Q Consensus 191 ~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l 222 (537)
+++..+.+++..++ ++..-+++...+.+..+
T Consensus 79 p~~~~~~v~~fm~~-~~Fl~ffIa~LI~GSIL 109 (414)
T PF03390_consen 79 PESVVEAVTNFMKG-SNFLYFFIAALIVGSIL 109 (414)
T ss_pred CHHHHHHHHHHhcc-CChHHHHHHHHHHhhhh
Confidence 23333333332222 14444445545544443
No 154
>COG1906 Uncharacterized conserved protein [Function unknown]
Probab=60.66 E-value=2.3e+02 Score=29.96 Aligned_cols=121 Identities=13% Similarity=0.252 Sum_probs=70.2
Q ss_pred ch-hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHHHHHHHHHHHHHHhhccch--hHHHHHHHHHHHhCCChhH
Q 045863 205 VS-EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTLLWVIGFVTFFLSSILDNL--TSTIVMVSLLRKLVPPSEY 280 (537)
Q Consensus 205 ~~-~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l~~~l~l~~~~lS~fl~N~--ta~~im~PI~~~l~~p~~~ 280 (537)
++ .++++++..|++-+..+++|+.+-.++.+... .|..++... .++..+++.. +.+.+-.|+.......-++
T Consensus 256 fnprI~~lliavmvfk~vIe~SGl~e~~ae~~l~f~aP~al~l~~----~fiiGlaTGI~fayvsiafPlL~pff~g~~~ 331 (388)
T COG1906 256 FNPRIVLLLIAVMVFKEVIEHSGLVEIFAEIMLSFHAPVALFLLL----TFIIGLATGIEFAYVSIAFPLLMPFFTGFKK 331 (388)
T ss_pred cCchhHHHHHHHHHHHHHHHhccHHHHHHHHHhccchhhHHHHHH----HHHHHHhhhhHHHHHHHhhhhhHHHhccchH
Confidence 44 78888999999999999999999666665443 333333222 2444444433 3336667777665322122
Q ss_pred HHHHHHHHHHHHhhccc-cccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHH
Q 045863 281 RKLLGAVVVIAANAGGA-WTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVP 335 (537)
Q Consensus 281 ~~~~l~~va~aan~Gg~-~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~ 335 (537)
...+|+..-+|. ..|+ .-+-.+-.+..+-+..+-.+.+..|..+.+.+.
T Consensus 332 -----lalay~ggy~GvmlSPv-HlClVlsaeyy~~ei~kvyrklllpavlt~~l~ 381 (388)
T COG1906 332 -----LALAYAGGYMGVMLSPV-HLCLVLSAEYYKAEIGKVYRKLLLPAVLTFALV 381 (388)
T ss_pred -----HHHHHHhhhhheecchh-hhhhheeHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 245555554444 4443 122223344567777777777887775555433
No 155
>PF13194 DUF4010: Domain of unknown function (DUF4010)
Probab=59.41 E-value=1.8e+02 Score=28.51 Aligned_cols=24 Identities=17% Similarity=0.301 Sum_probs=17.9
Q ss_pred HHHHHHhhccchhHHHHHHHHHHH
Q 045863 250 VTFFLSSILDNLTSTIVMVSLLRK 273 (537)
Q Consensus 250 ~~~~lS~fl~N~ta~~im~PI~~~ 273 (537)
++.++..+.++++++..+.-..|+
T Consensus 25 ltg~~GGlvSSTA~t~~la~~~r~ 48 (211)
T PF13194_consen 25 LTGLLGGLVSSTATTVSLARRSRE 48 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567778888999998887655544
No 156
>PRK10519 hypothetical protein; Provisional
Probab=58.81 E-value=1.1e+02 Score=28.50 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=32.3
Q ss_pred cCCh-HHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhh
Q 045863 426 RIDT-QGALFFLGILLSVSSLEAAGLLREIANYLDAHI 462 (537)
Q Consensus 426 ~v~W-~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i 462 (537)
++.| +.+-.+...+.+++.++++|+.|++++.+.+..
T Consensus 20 ~i~~~~iiP~li~~~v~I~iL~~sG~ld~l~~~l~Pvm 57 (151)
T PRK10519 20 TIATTNLLPNVLMAFVIIQALNITGLLDLVGHIFGPVM 57 (151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4567 578888899999999999999999999998865
No 157
>COG1620 LldP L-lactate permease [Energy production and conversion]
Probab=54.52 E-value=3.6e+02 Score=30.30 Aligned_cols=134 Identities=13% Similarity=0.132 Sum_probs=81.4
Q ss_pred CHHHHHHHhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHH-HHHH
Q 045863 190 STEIAVSELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTST-IVMV 268 (537)
Q Consensus 190 ~~~~a~~~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~-~im~ 268 (537)
+.+++.+.+...+.+....++.+.+++.++..+..+|.-+-+++.+.+. .....+.--++..+-+.+..++|+. +++-
T Consensus 363 ~~~~~~~~~~~t~k~~~~p~lti~~~l~~~~l~~~SG~~~tla~~~A~~-G~~fp~fSp~lGwiG~FltGS~T~sN~lFg 441 (522)
T COG1620 363 KPKDAVTAFKETLKELKLPILTIIFALAMAYLMNYSGLSKTLALALAHT-GEAFPLFSPFLGWIGVFLTGSNTSSNLLFG 441 (522)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHHhc-CCCchhHhHHHHHHhhhhcccchHHHHHHH
Confidence 7778887787777888889999999999999999999998899888653 1122222222333334444455555 5665
Q ss_pred HHH----HHhCCChhHHHHHHHHHHHHHhh-ccc-cccccchhhhhhHhcc-cC--ChHHHHHHhhHHHHHHHH
Q 045863 269 SLL----RKLVPPSEYRKLLGAVVVIAANA-GGA-WTPIGDVTTTMLWIHG-QI--STLPTMKSLFIPSAVSLA 333 (537)
Q Consensus 269 PI~----~~l~~p~~~~~~~l~~va~aan~-Gg~-~TpiG~~~Nll~~~~~-~i--sf~~~~~~~~pp~lv~l~ 333 (537)
|+= +...-+ +. ...++|. ||. .-+| +|+|+.+.... ++ .=.|-+++-.+|++...+
T Consensus 442 ~lQ~~~A~~iG~s-~~-------l~~AantvGg~~gkMI-spqsIa~acaavg~~gkEg~l~r~tv~~sl~~~~ 506 (522)
T COG1620 442 PLQQTTAEQIGLS-PV-------LLVAANTVGGVMGKMI-SPQSIAAACAAVGLVGKEGDLLRKTVKPSLIYLI 506 (522)
T ss_pred HHHHHHHHHcCCC-HH-------HHHHHHhhhhhhcccc-CHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 653 333322 21 2234454 444 3344 68887665421 22 124566777777765544
No 158
>PRK09921 permease DsdX; Provisional
Probab=44.79 E-value=4.6e+02 Score=28.81 Aligned_cols=74 Identities=9% Similarity=0.166 Sum_probs=45.0
Q ss_pred HhhhhhccchhHHHHHHHHHHHHHHHHHhChHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHH-----HHHHHHH
Q 045863 197 ELSRASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTST-----IVMVSLL 271 (537)
Q Consensus 197 ~~~~~ls~~~~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~-----~im~PI~ 271 (537)
..++++.....++....+.-.+.+.+.++|.+|.+++.+.+.+-.-++ .-.+++.++.....+.++. .++.|+.
T Consensus 297 ~~~~al~~~~~illi~GaGGafg~Vl~~sg~~~~i~~~l~~~~~~pl~-~~~liaa~l~~a~GSaTva~~taa~i~~p~l 375 (445)
T PRK09921 297 HTENGFGSIANILLIIGAGGAFNAILKSSGLADTLAVILSNMHMHPIL-LAWLVALILHAAVGSATVAMMGATAIVAPML 375 (445)
T ss_pred HHHHHHHHHHHHHHHHhccHhHHHHHHhCCHHHHHHHHHHhCCCCHHH-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHh
Confidence 344444333454444444468999999999999999999754322222 4444556666665444333 3677886
No 159
>COG3817 Predicted membrane protein [Function unknown]
Probab=40.15 E-value=4.2e+02 Score=27.04 Aligned_cols=100 Identities=10% Similarity=0.109 Sum_probs=58.6
Q ss_pred HhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHH------HHHHHHHHHHhHchHHHHHHHHhhhh-cc
Q 045863 423 ALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDL------IASAIGVVSAVIDNVPLVAATMGMYD-LT 495 (537)
Q Consensus 423 ~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~------i~~i~~~lS~~isNtp~va~llpv~~-~~ 495 (537)
..+.+.|..++=-. +-+++......|+-|.+++....+++.... .++.-++.+.++.|--. .+|+.. ..
T Consensus 160 l~d~v~wa~iLPQ~-LaaLG~vFa~aGvG~~ia~L~~~~i~~DsrfiaV~~Y~vgMalfTmiMGNaFA---AFpViTagI 235 (313)
T COG3817 160 LMDQVSWAAILPQM-LAALGAVFASAGVGDVIAHLISEIIPADSRFIAVAAYCVGMALFTMIMGNAFA---AFPVITAGI 235 (313)
T ss_pred HHHHhhHHHHHHHH-HHHHHHHHHhcchhHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHcccch---hceeeeccc
Confidence 34478898765321 223456688899999999999988865431 23444777777777533 245442 11
Q ss_pred -------CCCCChHHHHHHHHHHHH-hhhhhHHhHHHHH
Q 045863 496 -------SFPQDSKFWQLIAYCAGT-GGSMLIIGSAAGV 526 (537)
Q Consensus 496 -------~~~~~~~~~laLa~~a~i-Gg~lTpiGS~an~ 526 (537)
+.+.++...-++.+-++. |.-+||.++==|.
T Consensus 236 gvPilv~q~ganPaV~~AigM~sGfCGTLlTPMAANFN~ 274 (313)
T COG3817 236 GVPILVGQLGANPAVAGAIGMLSGFCGTLLTPMAANFNI 274 (313)
T ss_pred ccceeeeccCCChHHHHHHHHHhhhhhhccChhhhhcCc
Confidence 122233444455555554 4447999864443
No 160
>PRK10519 hypothetical protein; Provisional
Probab=38.60 E-value=2e+02 Score=26.77 Aligned_cols=65 Identities=17% Similarity=0.075 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHhcC-CchHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNITTR-KPRTLLWVIGFVTFFLSSILDNLTSTIVMVSLLRK 273 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~~~-~~~~l~~~l~l~~~~lS~fl~N~ta~~im~PI~~~ 273 (537)
+.+=.++.++++...++++|..|.++..+..- +..++ ==-....++..+++...+.+++..+.++
T Consensus 25 ~iiP~li~~~v~I~iL~~sG~ld~l~~~l~Pvm~llGL--Pgea~~vll~g~ls~~~a~~vl~~L~~~ 90 (151)
T PRK10519 25 NLLPNVLMAFVIIQALNITGLLDLVGHIFGPVMALFGL--PGEAATVLLAAWMSMGGAVGVAASLFTA 90 (151)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHhHHHHHHHHHHHHHc
Confidence 57778899999999999999999999887420 00000 0011223334455567777787777754
No 161
>TIGR00825 EIIBC-GUT PTS system, glucitol/sorbitol-specific, IIBC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Gut family consists only of glucitol-specific permeases, but these occur both in Gram-negative and Gram-positive bacteria.E. coli consists of IIA protein, a IIC protein and a IIBC protein. This family is specific for the IIBC component.
Probab=35.85 E-value=51 Score=33.93 Aligned_cols=57 Identities=18% Similarity=0.033 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHH-----HHHHHhHchHHHHH
Q 045863 430 QGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAI-----GVVSAVIDNVPLVA 486 (537)
Q Consensus 430 ~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~-----~~lS~~isNtp~va 486 (537)
+.+-|.+-.-++.+.+..+|+-+|+|+.+...-++.+-+.+++ =|+|-++.--++++
T Consensus 188 tIlPFMAFVs~LIGiI~~sGiGd~iA~~l~PLAg~~~GLv~l~~ICs~PfLSP~LGPGAVIa 249 (331)
T TIGR00825 188 TILPFMAFVSALIGIIMASGLGDWIAHGLVPLAGNPIGLVILALICSFPLLSPFLGPGAVIA 249 (331)
T ss_pred HhhHHHHHHHHHHHHHhcccHHHHHHhhccccccChHHHHHHHHHHcchhcccccCCceehh
Confidence 3556666667778899999999999999988777665332222 34555554444444
No 162
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=30.11 E-value=1.7e+02 Score=32.03 Aligned_cols=124 Identities=16% Similarity=0.188 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHHHHHHhChHHHHHHHHh-cCCchHHHHHHHHHHHHHHhhccchhHHHHHH--------------HHH
Q 045863 207 EIVFFLLGAMTIVEIVDAHQGFKLVTDNIT-TRKPRTLLWVIGFVTFFLSSILDNLTSTIVMV--------------SLL 271 (537)
Q Consensus 207 ~~I~li~g~~ii~~~l~~tGl~~ria~~l~-~~~~~~l~~~l~l~~~~lS~fl~N~ta~~im~--------------PI~ 271 (537)
.-+-++..++.++.++.| .+.-.+. |.|+|+++..-.+++++...++.-..+..+|. |-+
T Consensus 64 ~~lG~i~s~f~i~YG~sK-----f~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~ 138 (448)
T COG2271 64 TQLGILGSAFSITYGVSK-----FVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPC 138 (448)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHH
Confidence 445556667776666544 4554554 45777766555555666555543333333322 111
Q ss_pred -HHh---CCChhHHHHHHHHHHHHHhhccccccccchhhhhhHhcccCChHHHHHHhhHHHHHHHHHHHHHHHhh
Q 045863 272 -RKL---VPPSEYRKLLGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKSLFIPSAVSLAVPLAFLSLT 342 (537)
Q Consensus 272 -~~l---~~p~~~~~~~l~~va~aan~Gg~~TpiG~~~Nll~~~~~~isf~~~~~~~~pp~lv~l~v~~~ll~~~ 342 (537)
|.+ .++++..+.+ -.=..+=|+||+..|.= .++ ..-..+. +|-.....|+++++++.++.+...
T Consensus 139 ~~~i~~Wfsr~eRG~~~-siWn~shNiGGal~~~~--~~l-a~~~~~~---~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 139 ARTITHWFSRKERGTWW-SIWNTSHNIGGALAPLV--ALL-AFFAFHG---GWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHHHHHcCccccCceE-EEehhhhhcccchHHHH--HHH-HHHHhcc---chhHHHHHHHHHHHHHHHHHHHHh
Confidence 222 1222211111 11233447777754420 110 1101111 566667778888888777655443
No 163
>COG1283 NptA Na+/phosphate symporter [Inorganic ion transport and metabolism]
Probab=28.13 E-value=1.9e+02 Score=32.48 Aligned_cols=83 Identities=19% Similarity=0.113 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHhhh----hhhHHHHHHHHHHHHhH-chHHHHHHHHhhhhccCCCCChHHHHHHH
Q 045863 434 FFLGILLSVSSLEAAGLLREIANYLDAHI----SNIDLIASAIGVVSAVI-DNVPLVAATMGMYDLTSFPQDSKFWQLIA 508 (537)
Q Consensus 434 ~f~glf~l~~~L~~tG~~~~la~~l~~~i----~~~~~i~~i~~~lS~~i-sNtp~va~llpv~~~~~~~~~~~~~laLa 508 (537)
...++|..+..+-++|+-...++.+...+ .++..-+.+..+++..+ |.++++.+....+. .|.. .....+.+.
T Consensus 12 g~v~l~L~g~~~m~~Gv~~~~G~~lr~~L~~~t~np~~gvl~Gi~~T~llQSStatt~lt~gfV~-aGl~-sl~~Ai~vi 89 (533)
T COG1283 12 GAVALLLFGIKMVGDGVQRAAGDRLRKILARFTSNPILGVLAGIVATALLQSSTATTVLTIGFVA-AGLL-SLKQAIGVI 89 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhcchHHHHHHHHHh-cccc-chhhhhhhe
Confidence 33445555556667777666665554444 44443334444555444 44555544444442 1211 123445677
Q ss_pred HHHHHhhhhh
Q 045863 509 YCAGTGGSML 518 (537)
Q Consensus 509 ~~a~iGg~lT 518 (537)
+|+|+|...|
T Consensus 90 lGANIGTt~T 99 (533)
T COG1283 90 LGANIGTTVT 99 (533)
T ss_pred eccchhHHHH
Confidence 7888877654
No 164
>TIGR00869 sec62 protein translocation protein, Sec62 family. protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins has been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.
Probab=27.73 E-value=1.7e+02 Score=29.30 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=23.3
Q ss_pred hhhcccccchhhHHHHHHHHHHHHhhhhhccCchh
Q 045863 107 DFEANYQPKTDLLKALAVFAAAITGAVAINHSWVA 141 (537)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g 141 (537)
++-=.|+|.+.....+.++++..+.++.++|.|+-
T Consensus 107 ~YvW~ye~~~~~~~l~~~~~~~~ila~~lFPlWP~ 141 (232)
T TIGR00869 107 YYVWNYNPRPYMDYLIVILVVSIILALVLFPLWPR 141 (232)
T ss_pred eEEEEecCCcHHHHHHHHHHHHHHHHHhhcccChH
Confidence 45667888766555555555555556788999874
No 165
>TIGR01013 2a58 Phosphate:Na+ Symporter (PNaS) Family.
Probab=27.70 E-value=2.7e+02 Score=30.51 Aligned_cols=92 Identities=11% Similarity=0.074 Sum_probs=42.5
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHHHHHHHhHchHHHHHHHHhhh-hccCCCCChHHH
Q 045863 426 RIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAIGVVSAVIDNVPLVAATMGMY-DLTSFPQDSKFW 504 (537)
Q Consensus 426 ~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~~~lS~~isNtp~va~llpv~-~~~~~~~~~~~~ 504 (537)
.+.-+...++.|+-++.++-..+-...|+.......-+....-.++.++++.+++....+ ..+++. ...+.- +...+
T Consensus 66 ~v~~Gl~~l~~ai~ii~ganigtt~t~~l~~~~~~~~~~~~~~~l~ga~~t~i~qSSsa~-i~l~~~l~~~gl~-~~~~a 143 (456)
T TIGR01013 66 MVSAGLLLVLLAIPLIMGANIGSSVTNAIVAIMQSGDRAWFRRAFIGATVADIFNSSLAL-VLLPLELTTGGIE-SVTLL 143 (456)
T ss_pred hHHhhHHHHHHHHHHHHHhccccccchHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHH-HHHHH
Confidence 334445555555555555544444444544443322222222234445555544333222 222332 111211 33556
Q ss_pred HHHHHHHHHhhhhhH
Q 045863 505 QLIAYCAGTGGSMLI 519 (537)
Q Consensus 505 laLa~~a~iGg~lTp 519 (537)
+++.+|+|+|+..|+
T Consensus 144 ~~~vlGaniGt~~ta 158 (456)
T TIGR01013 144 VVLVFGANGGGDAPD 158 (456)
T ss_pred HHHHhcCCCCcchHH
Confidence 777888888866544
No 166
>PF12056 DUF3537: Protein of unknown function (DUF3537); InterPro: IPR021924 This family of transmembrane proteins are functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 427 to 453 amino acids in length.
Probab=26.97 E-value=35 Score=36.57 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=32.5
Q ss_pred CCCCCCCcccccCCchhhhcccccchhhHHHHHHHHHHHHhhhhhccCchhhH
Q 045863 91 SGTCDPLCSLDETSSSDFEANYQPKTDLLKALAVFAAAITGAVAINHSWVAAN 143 (537)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 143 (537)
...+|+++..+-.++++-+.+|++++.+. .|+.+.|.|.+
T Consensus 342 ~d~~~~~~~~~~~~~~~~~~SfqKRQALV-------------tYLq~N~aGIT 381 (398)
T PF12056_consen 342 GDEEDDLDNTKQLPSYADMISFQKRQALV-------------TYLQNNRAGIT 381 (398)
T ss_pred cccCCCCCccccccccchhHHHHHHHHHH-------------HHHhcCCCCeE
Confidence 34699999888888887799999988776 58888888855
No 167
>COG3493 CitS Na+/citrate symporter [Energy production and conversion]
Probab=24.42 E-value=9.3e+02 Score=26.14 Aligned_cols=65 Identities=15% Similarity=-0.009 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHhhhhhccCchhhHHHHHHHHHHHHHHHHHHhhcccCcch--------HHHHHHHHHHHHHHHhc
Q 045863 118 LLKALAVFAAAITGAVAINHSWVAANQDLAMALLFGIGYTGIIFEESLAFNK--------SGVGLLMAVSLWIVRSI 186 (537)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~l~IFv~~i~~ii~e~~l~ip~--------~~val~~~~~l~v~gvi 186 (537)
+.++.+.+++.++...|+.--|.+|-- -.++..+...+.++|-++ +|. ++.+++++..++..+.+
T Consensus 23 pLPly~~~~ivi~v~~~~~~lP~~mlg-~favm~vlG~llg~IG~r---iPI~nk~iGG~aIl~~fvaa~~v~~~ll 95 (438)
T COG3493 23 PLPLYAFLAIVIIVVVYLGKLPSDMLG-GFAVMFVLGALLGEIGKR---IPIVNKYIGGGAILALFVAAYLVFYNLL 95 (438)
T ss_pred chHHHHHHHHHHHHHHHHccCcHHHHH-HHHHHHHHHHHHHHhccc---CcchhhccCCchHHHHHHHHHHHHhccC
Confidence 344444444444434577777877664 333444566777888888 773 56777777777766664
No 168
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=23.42 E-value=4.1e+02 Score=24.66 Aligned_cols=82 Identities=11% Similarity=0.020 Sum_probs=50.1
Q ss_pred cccCCchhhhcccccchhhHH--HHHHHHHHHHhhhhhccCchhhHH-HHHHHHHHHHHHHHHHhhcccCcchHHHHHHH
Q 045863 100 LDETSSSDFEANYQPKTDLLK--ALAVFAAAITGAVAINHSWVAANQ-DLAMALLFGIGYTGIIFEESLAFNKSGVGLLM 176 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~g~~~-~~~~l~IFv~~i~~ii~e~~l~ip~~~val~~ 176 (537)
-|+-|..|=+|..+.-+...- .+..+.+...|.+|+.-.|-|.+. ..-++.+.+.++.+|.-+ +|.+.+|-..
T Consensus 30 ae~gsRA~r~A~~elPEAl~till~~ll~~~T~G~~~~lm~~kgi~rm~lG~~vm~~~~~llw~gg----v~~~~IAg~~ 105 (144)
T PF01350_consen 30 AEPGSRAYRMALEELPEALETILLVVLLGVMTLGVFWFLMRRKGIGRMSLGMLVMAVAGYLLWMGG----VPPGQIAGVL 105 (144)
T ss_pred CCCCcHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhhcCCCcchhhHHHHHHHHHHHHHHhcC----CcHHHhHHHH
Confidence 344444444444333333222 245555556667799999999994 777778888888888776 5766666555
Q ss_pred HHHHHHHHh
Q 045863 177 AVSLWIVRS 185 (537)
Q Consensus 177 ~~~l~v~gv 185 (537)
.+..++.-+
T Consensus 106 lv~filmvV 114 (144)
T PF01350_consen 106 LVFFILMVV 114 (144)
T ss_pred HHHHHHHHh
Confidence 555444444
No 169
>COG3732 SrlE Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]
Probab=22.43 E-value=87 Score=31.89 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=58.9
Q ss_pred CHHHHhhcCChHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHhhhhhhHHHHHHH-----HHHHHhHchHHHHHHHHhhhh
Q 045863 419 KVPQALSRIDTQGALFFLGILLSVSSLEAAGLLREIANYLDAHISNIDLIASAI-----GVVSAVIDNVPLVAATMGMYD 493 (537)
Q Consensus 419 ~~~~~l~~v~W~tLl~f~glf~l~~~L~~tG~~~~la~~l~~~i~~~~~i~~i~-----~~lS~~isNtp~va~llpv~~ 493 (537)
+.|..+|+ .+-|.+-.-++.+.+..||+-+++|+.+...-++.|-++.++ =|+|-++.--++++=...+..
T Consensus 178 tid~vlkn----ilPFMAFvs~lIgii~~tglGd~iA~~l~PLA~~~~Gll~la~iC~~P~LSP~LGPGAvIaQViGVlI 253 (328)
T COG3732 178 TIDTVLKN----ILPFMAFVSALIGIILYTGLGDVIAHGLSPLANSIWGLLLLALICSFPFLSPFLGPGAVIAQVIGVLI 253 (328)
T ss_pred HHHHHHHH----hHHHHHHHHHHHHHHHHhhhHHHHhccccccccChHHHHHHHHHhcccccCcccCcchhhhhhheeee
Confidence 56677764 566667677778899999999999999988766665333322 345555555555554444431
Q ss_pred --ccCCCC-ChHHHHHHHHHHH--HhhhhhHHh
Q 045863 494 --LTSFPQ-DSKFWQLIAYCAG--TGGSMLIIG 521 (537)
Q Consensus 494 --~~~~~~-~~~~~laLa~~a~--iGg~lTpiG 521 (537)
..+.+. ++.+.+.-+|+.| .|+-.-|+|
T Consensus 254 G~qIg~G~Ipp~~ALPALFAiN~Q~gcDFiPVG 286 (328)
T COG3732 254 GVQIGLGNIPPHLALPALFAINAQAGCDFIPVG 286 (328)
T ss_pred eeeeccCCCChhhhhhhHhhccccccCceeecc
Confidence 122221 3334443345444 555555555
No 170
>COG4402 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.78 E-value=42 Score=34.93 Aligned_cols=23 Identities=30% Similarity=0.641 Sum_probs=18.0
Q ss_pred ccCCCCCCCCCcccccCCchhhhc
Q 045863 87 LESSSGTCDPLCSLDETSSSDFEA 110 (537)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~ 110 (537)
..-.-|+||| ||-|..+.||++.
T Consensus 311 yAwDMgScdp-cs~DPL~p~el~~ 333 (457)
T COG4402 311 YAWDMGSCDP-CSRDPLLPEELGN 333 (457)
T ss_pred hcccccCCCc-ccCCCCCHHHHhh
Confidence 3345689999 9999999887753
No 171
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=21.16 E-value=4.6e+02 Score=29.12 Aligned_cols=79 Identities=10% Similarity=-0.121 Sum_probs=46.0
Q ss_pred ccccCCchhhhcccc-cchhhHHHHHHHHHHHHhhh----hhccCchh--------------hH-HHHHHHHHHHHHHHH
Q 045863 99 SLDETSSSDFEANYQ-PKTDLLKALAVFAAAITGAV----AINHSWVA--------------AN-QDLAMALLFGIGYTG 158 (537)
Q Consensus 99 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~p~g--------------~~-~~~~~l~IFv~~i~~ 158 (537)
..+..++|+-.+.++ .|+..++|++.+++.+.-.. |+.-+|.+ .. +-|..+.+.......
T Consensus 21 ~~~~g~~e~~~~~~~~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~m 100 (480)
T KOG2563|consen 21 EANGGLAENRAAAAPGHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSAADWLSMIYMVVSVPFGFAAM 100 (480)
T ss_pred CcccCCCCChhhhccccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhHHH
Confidence 344455555444443 67778889888887775221 66667764 12 345556666666667
Q ss_pred HHhhcccCcchHHHHHHHHHHH
Q 045863 159 IIFEESLAFNKSGVGLLMAVSL 180 (537)
Q Consensus 159 ii~e~~l~ip~~~val~~~~~l 180 (537)
|+.++ ...-.+.+++..+-
T Consensus 101 w~ldk---~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 101 WILDK---FGLRTALLLGTVLN 119 (480)
T ss_pred Hhhcc---cchHHHHHHHHHHH
Confidence 77776 44444444444433
Done!