Query 045863
Match_columns 537
No_of_seqs 279 out of 1932
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 10:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045863.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045863hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3b2ua2 g.3.9.1 (A:481-502) EG 34.3 6 0.00044 22.6 0.8 11 93-103 1-11 (26)
2 d1bdya_ b.7.1.1 (A:) Domain fr 14.1 20 0.0014 28.4 0.3 19 83-101 13-31 (123)
3 d1pw4a_ f.38.1.1 (A:) Glycerol 7.7 5.9E+02 0.043 22.0 8.8 6 386-391 280-285 (447)
4 d1pv7a_ f.38.1.2 (A:) Lactose 4.9 8E+02 0.058 20.2 8.9 38 227-264 278-315 (417)
5 d3d4ub1 g.9.1.3 (B:1-37) Carbo 4.0 1.2E+02 0.0091 18.3 0.6 15 85-99 18-32 (37)
6 d1e0fi_ g.3.15.2 (I:) Haemadin 3.0 2.1E+02 0.016 18.5 1.1 17 95-111 34-50 (57)
7 d1d0gr1 g.24.1.1 (R:21-61) Dea 2.9 2.1E+02 0.015 17.4 0.9 18 89-106 3-20 (41)
8 d2heyr2 g.24.1.1 (R:143-166) T 2.8 2.8E+02 0.021 15.2 1.3 12 87-98 13-24 (26)
9 d2axti1 f.23.37.1 (I:1-35) Pho 2.8 2.3E+02 0.017 17.1 0.9 17 247-263 13-29 (35)
10 d1nuba2 g.3.11.3 (A:53-77) Dom 2.6 1.6E+02 0.012 16.5 -0.0 11 96-106 12-22 (26)
No 1
>d3b2ua2 g.3.9.1 (A:481-502) EGF receptor Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.32 E-value=6 Score=22.64 Aligned_cols=11 Identities=36% Similarity=0.878 Sum_probs=8.4
Q ss_pred CCCCCcccccC
Q 045863 93 TCDPLCSLDET 103 (537)
Q Consensus 93 ~~~~~~~~~~~ 103 (537)
-|.||||-|.-
T Consensus 1 vchplcssegc 11 (26)
T d3b2ua2 1 VCHALCSPEGC 11 (26)
T ss_dssp SCCTTCCTTCB
T ss_pred CcccccCcCcc
Confidence 38999997754
No 2
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.11 E-value=20 Score=28.41 Aligned_cols=19 Identities=16% Similarity=0.642 Sum_probs=14.5
Q ss_pred hhhhccCCCCCCCCCcccc
Q 045863 83 QFQELESSSGTCDPLCSLD 101 (537)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~ 101 (537)
+++.+.+.+|.|||.|.+.
T Consensus 13 ~~~~~~~~~~~~dPY~~v~ 31 (123)
T d1bdya_ 13 ELGSLQAEDDASQPFCAVK 31 (123)
T ss_dssp ECCTTCCCCCSCCCEEEEE
T ss_pred ecccCCCCCCCCCCEEEEE
Confidence 4555666799999999765
No 3
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=7.67 E-value=5.9e+02 Score=21.97 Aligned_cols=6 Identities=0% Similarity=-0.225 Sum_probs=2.7
Q ss_pred cCCChH
Q 045863 386 TGLPPY 391 (537)
Q Consensus 386 ~gi~~~ 391 (537)
.+.+..
T Consensus 280 ~~~~~~ 285 (447)
T d1pw4a_ 280 KHFALD 285 (447)
T ss_dssp SCCCHH
T ss_pred cccccc
Confidence 345443
No 4
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=4.95 E-value=8e+02 Score=20.20 Aligned_cols=38 Identities=18% Similarity=0.030 Sum_probs=17.6
Q ss_pred hHHHHHHHHhcCCchHHHHHHHHHHHHHHhhccchhHH
Q 045863 227 GFKLVTDNITTRKPRTLLWVIGFVTFFLSSILDNLTST 264 (537)
Q Consensus 227 l~~ria~~l~~~~~~~l~~~l~l~~~~lS~fl~N~ta~ 264 (537)
+..++.++..+++...+...+..+..++-.+.+|....
T Consensus 278 ~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T d1pv7a_ 278 FAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEV 315 (417)
T ss_dssp THHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred hhhhhhcccccccchhhhHHHHHHhhhccccccccchh
Confidence 44455544433322333333444445555566665554
No 5
>d3d4ub1 g.9.1.3 (B:1-37) Carboxypeptidase inhibitor {Tick (Rhipicephalus bursa) [TaxId: 67831]}
Probab=3.99 E-value=1.2e+02 Score=18.25 Aligned_cols=15 Identities=40% Similarity=0.771 Sum_probs=11.1
Q ss_pred hhccCCCCCCCCCcc
Q 045863 85 QELESSSGTCDPLCS 99 (537)
Q Consensus 85 ~~~~~~~~~~~~~~~ 99 (537)
||+.-+-+.||..|-
T Consensus 18 ~e~rlsy~gc~tvcc 32 (37)
T d3d4ub1 18 QEARLSYGGCSTVCC 32 (37)
T ss_dssp GGGEECCSCCSSEEE
T ss_pred HhHeeccCCcceeEe
Confidence 455557899999883
No 6
>d1e0fi_ g.3.15.2 (I:) Haemadin {Indian leech (Haemadipsa sylvestris) [TaxId: 13555]}
Probab=2.99 E-value=2.1e+02 Score=18.48 Aligned_cols=17 Identities=47% Similarity=0.591 Sum_probs=11.4
Q ss_pred CCCcccccCCchhhhcc
Q 045863 95 DPLCSLDETSSSDFEAN 111 (537)
Q Consensus 95 ~~~~~~~~~~~~~~~~~ 111 (537)
|--||-|...|.|||..
T Consensus 34 dgqcsgdpkpssefeef 50 (57)
T d1e0fi_ 34 DGQCSGDPKPSSEFEEF 50 (57)
T ss_dssp SSCBCSCCCCCCCSCCC
T ss_pred CCcccCCCCccccccee
Confidence 45678887777766653
No 7
>d1d0gr1 g.24.1.1 (R:21-61) Death receptor-5 (dr5) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.87 E-value=2.1e+02 Score=17.43 Aligned_cols=18 Identities=28% Similarity=0.523 Sum_probs=13.7
Q ss_pred CCCCCCCCCcccccCCch
Q 045863 89 SSSGTCDPLCSLDETSSS 106 (537)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~ 106 (537)
|+.|.|.|=|-+.|.+.+
T Consensus 3 p~eglcppghhised~r~ 20 (41)
T d1d0gr1 3 PSEGLCPPGHHISEDGRD 20 (41)
T ss_dssp CBTTBBCTTEEECSSSSC
T ss_pred CcCccCCCCcccccccce
Confidence 567889888888777655
No 8
>d2heyr2 g.24.1.1 (R:143-166) Tumor necrosis factor receptor superfamily member 4, OX40L receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.82 E-value=2.8e+02 Score=15.20 Aligned_cols=12 Identities=33% Similarity=0.852 Sum_probs=6.4
Q ss_pred ccCCCCCCCCCc
Q 045863 87 LESSSGTCDPLC 98 (537)
Q Consensus 87 ~~~~~~~~~~~~ 98 (537)
|.|.|.+-|.+|
T Consensus 13 lqpasnssdaic 24 (26)
T d2heyr2 13 LQPASNSSDAIC 24 (26)
T ss_dssp SBCCCSSSCCBC
T ss_pred ccccCCCccccc
Confidence 445555555555
No 9
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=2.77 E-value=2.3e+02 Score=17.13 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=9.0
Q ss_pred HHHHHHHHHhhccchhH
Q 045863 247 IGFVTFFLSSILDNLTS 263 (537)
Q Consensus 247 l~l~~~~lS~fl~N~ta 263 (537)
+++++.++=.|++|++.
T Consensus 13 ~fFv~lFiFGFLSnDP~ 29 (35)
T d2axti1 13 TFFVLLFVFGFLSGDPA 29 (35)
T ss_dssp HHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHhhccCCCC
Confidence 34455555555666553
No 10
>d1nuba2 g.3.11.3 (A:53-77) Domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.55 E-value=1.6e+02 Score=16.52 Aligned_cols=11 Identities=36% Similarity=0.863 Sum_probs=6.7
Q ss_pred CCcccccCCch
Q 045863 96 PLCSLDETSSS 106 (537)
Q Consensus 96 ~~~~~~~~~~~ 106 (537)
..|.+||..++
T Consensus 12 kvcevde~n~p 22 (26)
T d1nuba2 12 KVCELDENNTP 22 (26)
T ss_dssp EEEEECTTCCE
T ss_pred cEeeeCCCCCc
Confidence 35777776543
Done!