Query 045866
Match_columns 406
No_of_seqs 210 out of 1532
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:44:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h90_A Ferrous-iron efflux pum 100.0 4.1E-54 1.4E-58 416.6 16.6 277 64-404 3-282 (283)
2 3j1z_P YIIP, cation efflux fam 100.0 2.6E-54 8.9E-59 422.3 13.6 276 64-403 12-290 (306)
3 3byp_A CZRB protein; membrane 99.4 1.3E-12 4.4E-17 104.8 9.4 83 321-404 1-88 (94)
4 2zzt_A Putative uncharacterize 99.2 1.1E-11 3.8E-16 102.0 7.6 80 323-403 1-86 (107)
5 3j1z_P YIIP, cation efflux fam 96.9 0.00048 1.6E-08 66.5 3.9 92 65-164 121-212 (306)
6 3h90_A Ferrous-iron efflux pum 96.9 0.00034 1.2E-08 66.6 2.9 92 65-164 112-203 (283)
7 3cq1_A Putative uncharacterize 79.5 6.8 0.00023 30.7 7.5 72 332-403 8-85 (103)
8 3lno_A Putative uncharacterize 76.2 6.2 0.00021 31.3 6.4 46 359-404 44-90 (108)
9 1uwd_A Hypothetical protein TM 73.8 9 0.00031 30.0 6.8 69 332-403 8-86 (103)
10 3rze_A Histamine H1 receptor, 62.1 54 0.0019 31.2 11.2 25 167-191 11-35 (452)
11 3uon_A Human M2 muscarinic ace 57.8 57 0.002 31.2 10.5 22 170-191 29-50 (467)
12 3lax_A Phenylacetate-coenzyme 57.8 54 0.0018 25.1 8.5 64 329-393 13-81 (109)
13 2rh1_A Beta-2-adrenergic recep 54.4 68 0.0023 31.6 10.6 20 171-190 47-66 (500)
14 2z73_A Rhodopsin; visual pigme 52.0 73 0.0025 30.5 10.2 21 171-191 41-61 (448)
15 4dkl_A MU-type opioid receptor 51.0 82 0.0028 30.0 10.3 22 170-191 23-44 (464)
16 3vw7_A Proteinase-activated re 48.9 76 0.0026 30.5 9.8 22 169-190 25-46 (484)
17 3gxs_A Phenylacetate-coenzyme 48.1 91 0.0031 23.9 9.2 69 329-400 13-87 (109)
18 3eml_A Human adenosine A2A rec 47.2 87 0.003 30.0 9.9 23 169-191 26-48 (488)
19 1u19_A Rhodopsin; G protein-co 46.7 1.3E+02 0.0044 27.2 10.6 21 171-191 45-65 (349)
20 2ks9_A Substance-P receptor; w 44.3 1.2E+02 0.0042 27.7 10.1 20 171-190 39-58 (364)
21 3sn6_R Lysozyme, beta-2 adrene 43.3 74 0.0025 31.4 8.8 23 169-191 187-209 (514)
22 2jp3_A FXYD domain-containing 42.5 36 0.0012 24.6 4.4 34 121-155 6-39 (67)
23 3pbl_A D(3) dopamine receptor, 42.5 1.2E+02 0.0042 29.0 10.1 24 168-191 42-65 (481)
24 3odu_A C-X-C chemokine recepto 41.1 1.4E+02 0.0048 28.7 10.4 22 170-191 54-75 (502)
25 4eiy_A Adenosine receptor A2A/ 39.6 1.4E+02 0.0049 28.1 10.0 22 170-191 37-58 (447)
26 4ea3_A Fusion protein of nocic 38.1 1.7E+02 0.0057 27.9 10.2 22 170-191 131-152 (434)
27 2jsx_A Protein NAPD; TAT, proo 35.4 1E+02 0.0035 23.7 6.5 67 322-400 11-77 (95)
28 4amj_A Beta-1 adrenergic recep 34.7 1E+02 0.0034 27.4 7.6 23 169-191 16-38 (315)
29 2zxe_G FXYD10, phospholemman-l 34.3 41 0.0014 24.8 3.7 32 121-153 8-39 (74)
30 2cvi_A 75AA long hypothetical 31.7 81 0.0028 22.9 5.3 59 332-399 15-73 (83)
31 3v2y_A Sphingosine 1-phosphate 27.3 2.6E+02 0.0088 27.5 9.8 22 170-191 69-90 (520)
32 2zbc_A 83AA long hypothetical 25.8 76 0.0026 22.8 4.1 60 332-400 15-74 (83)
33 3kog_A Putative pore-forming t 25.1 22 0.00074 32.3 1.0 11 195-205 228-238 (256)
34 3tuf_A Stage III sporulation p 22.5 57 0.0019 28.8 3.2 52 346-402 144-196 (197)
35 4grv_A Neurotensin receptor ty 21.2 5E+02 0.017 25.2 10.5 37 269-305 78-116 (510)
36 3arc_I Photosystem II reaction 20.8 1.2E+02 0.0043 19.2 3.6 24 66-89 3-26 (38)
No 1
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=100.00 E-value=4.1e-54 Score=416.56 Aligned_cols=277 Identities=18% Similarity=0.226 Sum_probs=260.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCcHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHH
Q 045866 64 MLKLLIVVVLCIIFMGVEVVGGMKANSLAVLTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQL 143 (406)
Q Consensus 64 ~r~l~i~~~~~~~~~~~e~v~g~~s~S~aLlaDa~h~l~D~~s~~i~l~a~~~s~~~~~~~~pyG~~R~E~l~~l~~~~~ 143 (406)
+|.+++++++|++++++|+++|+++||+||++||+|+++|+++.++++++.++++||+|++|||||+|+|++++++++++
T Consensus 3 ~r~~~~~~~~n~~l~~~k~~~g~~t~S~allaDa~hsl~D~~~~~~~l~~~~~s~~~~d~~~pyG~~r~E~l~~l~~~~~ 82 (283)
T 3h90_A 3 SRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMF 82 (283)
T ss_dssp CTHHHHHHHHHHTTHHHHHHSSCSSSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Q 045866 144 IWLLAGILVYEAIVRLIHENGQVQGFLMFVVSAIGLAVNIAMAFFLGHDHGHGHNHGHDHSHGHDAKHHQHHHGGDFKHR 223 (406)
Q Consensus 144 l~~~~~~i~~eai~~li~~~~~~~~~~~~~v~~~~l~vn~~~~~~~~~~~~h~~~~~h~~~h~~g~~~~~~~~~~~~~~~ 223 (406)
|+++++++++||++++++|++...+.++++++++++++|.++++++++
T Consensus 83 l~~~~~~i~~eai~~l~~~~~~~~~~~~l~v~~~s~~v~~~~~~~~~~-------------------------------- 130 (283)
T 3h90_A 83 ISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRW-------------------------------- 130 (283)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCCCCCCCCTHHHHHHHHHHHHHHHHHHH--------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 999999999999999999887766777899999999999999998875
Q ss_pred CCCCCCCCccCCcccccccccCCCCCCCcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q 045866 224 DEHLHSHETDRTEPLLSTCSEEHKPKDGPKQKKQRNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIIDLICTLAF 303 (406)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~sv~vli~~~l~~~~~~~~~~D~i~slii 303 (406)
..|+.+|.+++++++|++.|+++|++++++.++.+ .+|+|+||++++++
T Consensus 131 -----------------------------~~~~~~s~~l~a~~~h~~~D~~~s~~vli~~~~~~--~g~~~~D~i~~i~i 179 (283)
T 3h90_A 131 -----------------------------VVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSW--YGWHRADALFALGI 179 (283)
T ss_dssp -----------------------------HHHHSCCHHHHHHHHHHHHHHCCCSCSCSSSCSCS--TTSCCSTHHHHHHH
T ss_pred -----------------------------HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCchHHHHHHHHHH
Confidence 35778999999999999999999999999877643 38999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHccCCCcccHHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCC---CHHHHHH
Q 045866 304 SAIVLGTTFRMLRNILEILMESTPREVDATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEA---DADMVLE 380 (406)
Q Consensus 304 s~~il~~~~~l~r~~~~~Ll~~~p~~~~~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~---~~~~i~~ 380 (406)
+++|++++++++|++...|||++|++++.+++++.+++.|||.++|++|+|+. +.++.+++||.++++. ++|++.+
T Consensus 180 a~~i~~~~~~l~~~s~~~Ll~~~~~~~~~~~i~~~i~~~~~V~~v~~l~~~~~-G~~~~v~~hv~v~~~~~~~~~~~i~~ 258 (283)
T 3h90_A 180 GIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQS-GPTRFIQIHLEMEDSLPLVQAHMVAD 258 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHSSSCSEEEEEEEEEE-TTEEEEEEEEECCTTCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCcccceeeEEEEE-CCcEEEEEEEEeCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999996 5678899999999984 7899999
Q ss_pred HHHHHHHHhCCCceEEEEeccCCC
Q 045866 381 NVIDYIKREYNISHVTIQIERECR 404 (406)
Q Consensus 381 ~v~~~l~~~~~i~~vtIqie~~~~ 404 (406)
+++++++++++..++|||+||+..
T Consensus 259 ~i~~~l~~~~~~~~v~ih~ep~~~ 282 (283)
T 3h90_A 259 QVEQAILRRFPGSDVIIHQDPCSV 282 (283)
T ss_dssp HHHHHHHHHSTTCEEEEEEECSCC
T ss_pred HHHHHHHHHCCCCeEEEEeccCCC
Confidence 999999999998999999999864
No 2
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=100.00 E-value=2.6e-54 Score=422.32 Aligned_cols=276 Identities=17% Similarity=0.209 Sum_probs=260.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCcHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHH
Q 045866 64 MLKLLIVVVLCIIFMGVEVVGGMKANSLAVLTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQL 143 (406)
Q Consensus 64 ~r~l~i~~~~~~~~~~~e~v~g~~s~S~aLlaDa~h~l~D~~s~~i~l~a~~~s~~~~~~~~pyG~~R~E~l~~l~~~~~ 143 (406)
++..++++++|++++++|+++|+++||+||++||+|+++|+++.+++++++++++||+|++|||||+|+|++++++++++
T Consensus 12 r~a~~~si~~n~~l~~~k~~ag~~sgS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~~~~~ 91 (306)
T 3j1z_P 12 KLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQSAF 91 (306)
T ss_dssp STTHHHHHHHHHHHTHHHHHTCTTSSSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Q 045866 144 IWLLAGILVYEAIVRLIHENGQVQGFLMFVVSAIGLAVNIAMAFFLGHDHGHGHNHGHDHSHGHDAKHHQHHHGGDFKHR 223 (406)
Q Consensus 144 l~~~~~~i~~eai~~li~~~~~~~~~~~~~v~~~~l~vn~~~~~~~~~~~~h~~~~~h~~~h~~g~~~~~~~~~~~~~~~ 223 (406)
|+++++++++||++++++|++...+.++++++++++++|..+++++++
T Consensus 92 l~~~~~~i~~eai~~l~~p~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------------------------------- 139 (306)
T 3j1z_P 92 IMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKR-------------------------------- 139 (306)
T ss_dssp HHHHHHHHHHHHHHTTTTTCCGGGTTCCHHHHHHHHHHHHHHHHHHHH--------------------------------
T ss_pred HHHHHHHHHHHhhhheecCCCccccccchhhhhhHhhhhHHHHHHHHH--------------------------------
Confidence 999999999999999999987777888899999999999999988864
Q ss_pred CCCCCCCCccCCcccccccccCCCCCCCcccccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q 045866 224 DEHLHSHETDRTEPLLSTCSEEHKPKDGPKQKKQRNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIIDLICTLAF 303 (406)
Q Consensus 224 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~sv~vli~~~l~~~~~~~~~~D~i~slii 303 (406)
..++.+|.+++++++|.++|+++|++++++.++.++ +|+|+||++++++
T Consensus 140 -----------------------------~~~~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~~~--g~~~~Dpi~ai~I 188 (306)
T 3j1z_P 140 -----------------------------ALAATNSTVVEADSLHYKSDLFLNAAVLLALVLSQY--GWWWADGLFAVLI 188 (306)
T ss_dssp -----------------------------HHTTSCCHHHHHHHHHHHHHTTCCTTCCCTTSSCCS--SSCCCHHHHHHHH
T ss_pred -----------------------------hccccCCHHHHHHHHhhcchhhhhhHHHHHHHHHHh--CcchhhhHHHHHH
Confidence 356778999999999999999999999998777654 8999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHccCCCcccHHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCC---CHHHHHH
Q 045866 304 SAIVLGTTFRMLRNILEILMESTPREVDATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEA---DADMVLE 380 (406)
Q Consensus 304 s~~il~~~~~l~r~~~~~Ll~~~p~~~~~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~---~~~~i~~ 380 (406)
+++|++++++++|++...|||++|++++.+++++.+++.|||.+||++|+|+. +.++++++|++++++. ++|++.+
T Consensus 189 a~~I~~~~~~l~~~s~~~Ll~~~~~~~~~~~I~~~i~~~~~V~~vh~l~~~~~-G~~~~v~~hi~v~~~~sl~eah~i~~ 267 (306)
T 3j1z_P 189 ACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRTRQA-GKTVFIQFHLELDGNLSLNEAHSITD 267 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHSTTBCCCCCBCCEEE-TTEEEEEECCEECTTSBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhcCCCcceeeeEEEEEE-CCcEEEEEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997 5688899999999994 7899999
Q ss_pred HHHHHHHHhCCCceEEEEeccCC
Q 045866 381 NVIDYIKREYNISHVTIQIEREC 403 (406)
Q Consensus 381 ~v~~~l~~~~~i~~vtIqie~~~ 403 (406)
++++++++++++.++|||+||..
T Consensus 268 ~ie~~l~~~~~~~~v~IhveP~~ 290 (306)
T 3j1z_P 268 TTGLRVKAAFEDAEVIIHQDPVQ 290 (306)
T ss_dssp HHHHHHHHHSTTCEEEECCEETT
T ss_pred HHHHHHHhhCCCCeEEEEeCCCC
Confidence 99999999999999999999954
No 3
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A
Probab=99.39 E-value=1.3e-12 Score=104.77 Aligned_cols=83 Identities=17% Similarity=0.247 Sum_probs=71.1
Q ss_pred HHHccCCCcccHHHHHHHHhcC--cCccccceEEEEEeeCCeEEEEEEEEeCCCC---CHHHHHHHHHHHHHHhCCCceE
Q 045866 321 ILMESTPREVDATRLEKGLCEM--EEVVAIHELHIWAITVGKVLLACHVKIKPEA---DADMVLENVIDYIKREYNISHV 395 (406)
Q Consensus 321 ~Ll~~~p~~~~~~~i~~~l~~~--~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~---~~~~i~~~v~~~l~~~~~i~~v 395 (406)
.|||.+|++++.+++++.+.++ +||.+||++|+|.. +..+++++||.++++. +++++.+++++.|+++|++.++
T Consensus 1 ~Lld~~~~~~~~~~I~~~l~~~~~~gV~~vh~l~~~~~-g~~~~v~~hi~v~~~~~~~~~h~i~~~ie~~l~~~~~~~~v 79 (94)
T 3byp_A 1 GLMDEGLPPEEVERIRAFLQERIRGRALEVHDLKTRRA-GPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGLQA 79 (94)
T ss_dssp -----CCCHHHHHHHHHHHHHHHTTTCSEEEEEEEEEE-TTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCCceeeeeEEEEEE-CCcEEEEEEEEECCCCcHHHHHHHHHHHHHHHHHHCCCCEE
Confidence 4899999999999999999999 99999999999997 5679999999999884 6789999999999999988899
Q ss_pred EEEeccCCC
Q 045866 396 TIQIERECR 404 (406)
Q Consensus 396 tIqie~~~~ 404 (406)
|||+||+..
T Consensus 80 tIh~ep~~~ 88 (94)
T 3byp_A 80 TIHVEPEGE 88 (94)
T ss_dssp EEEEEECC-
T ss_pred EEEeCCCCc
Confidence 999999654
No 4
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=99.25 E-value=1.1e-11 Score=101.99 Aligned_cols=80 Identities=18% Similarity=0.198 Sum_probs=69.7
Q ss_pred HccCCCcc--cHHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCC---CHHHHHHHHHHHHHHhCC-CceEE
Q 045866 323 MESTPREV--DATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEA---DADMVLENVIDYIKREYN-ISHVT 396 (406)
Q Consensus 323 l~~~p~~~--~~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~---~~~~i~~~v~~~l~~~~~-i~~vt 396 (406)
||.+|+++ +.++|++.+.++|||.+|+++|+|.. ++.+++++||.++++. +++++++++++.|++.|+ +.++|
T Consensus 1 md~~~~~~~~~~~~I~~~l~~~~gV~~vh~lr~r~~-G~~~~v~~hI~v~~~~sv~eah~i~~~ie~~L~~~~~~i~~vt 79 (107)
T 2zzt_A 1 MDGMKRTELDMYDDIFAVLERFPNVHNPHRVRIRRV-GTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVT 79 (107)
T ss_dssp ---CCHHHHHHHHHHHHHHTTCSSCEEEEEEEEECS-CC-CEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred CCCCCCccHHHHHHHHHHHHcCCCccccEEEEEEEE-CCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCcEEE
Confidence 67889989 99999999999999999999999984 5678999999999884 678899999999999998 99999
Q ss_pred EEeccCC
Q 045866 397 IQIEREC 403 (406)
Q Consensus 397 Iqie~~~ 403 (406)
||+||..
T Consensus 80 IhvEp~~ 86 (107)
T 2zzt_A 80 IHVEPLG 86 (107)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 9999964
No 5
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=96.93 E-value=0.00048 Score=66.47 Aligned_cols=92 Identities=24% Similarity=0.210 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHH
Q 045866 65 LKLLIVVVLCIIFMGVEVVGGMKANSLAVLTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQLI 144 (406)
Q Consensus 65 r~l~i~~~~~~~~~~~e~v~g~~s~S~aLlaDa~h~l~D~~s~~i~l~a~~~s~~~~~~~~pyG~~R~E~l~~l~~~~~l 144 (406)
-...++++.|+++.....-.+-..+|.++.+|+.|...|+++.+..++++..+. ||+.-++++++++.++++
T Consensus 121 ~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~~--------~g~~~~Dpi~ai~Ia~~I 192 (306)
T 3j1z_P 121 VVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLALVLSQ--------YGWWWADGLFAVLIACYI 192 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTCCTTCCCTTSSCC--------SSSCCCHHHHHHHHHHHH
T ss_pred hhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhhhhHHHHHHHHHH--------hCcchhhhHHHHHHHHHH
Confidence 345566677777777777777888999999999999999999888777664432 688889999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccc
Q 045866 145 WLLAGILVYEAIVRLIHENG 164 (406)
Q Consensus 145 ~~~~~~i~~eai~~li~~~~ 164 (406)
+..++.++++++..|++..+
T Consensus 193 ~~~~~~l~~~s~~~Ll~~~~ 212 (306)
T 3j1z_P 193 GQQAFDLGYRSIQALLDREL 212 (306)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhCccc
Confidence 99999999999999997543
No 6
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=96.93 E-value=0.00034 Score=66.58 Aligned_cols=92 Identities=26% Similarity=0.236 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHH
Q 045866 65 LKLLIVVVLCIIFMGVEVVGGMKANSLAVLTDAAHLLSDVAAFAISLFSIWASGWEATPRQSYGFFRIEILGALVSIQLI 144 (406)
Q Consensus 65 r~l~i~~~~~~~~~~~e~v~g~~s~S~aLlaDa~h~l~D~~s~~i~l~a~~~s~~~~~~~~pyG~~R~E~l~~l~~~~~l 144 (406)
-...+++++|.+++....-.|-..+|.++.+|+.|.+.|+++.+..+++...+ .+||..++++++++.++++
T Consensus 112 ~v~~~s~~v~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~~~s~~vli~~~~~--------~~g~~~~D~i~~i~ia~~i 183 (283)
T 3h90_A 112 IVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLS--------WYGWHRADALFALGIGIYI 183 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCCSCSCSSSCSC--------STTSCCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCchHHHHHHHHHHHHHH
Confidence 45677888888888887777888999999999999999999888776665332 2578889999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccc
Q 045866 145 WLLAGILVYEAIVRLIHENG 164 (406)
Q Consensus 145 ~~~~~~i~~eai~~li~~~~ 164 (406)
+..+..++++++..|++..+
T Consensus 184 ~~~~~~l~~~s~~~Ll~~~~ 203 (283)
T 3h90_A 184 LYSALRMGYEAVQSLLDRAL 203 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999997543
No 7
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=79.48 E-value=6.8 Score=30.72 Aligned_cols=72 Identities=13% Similarity=0.048 Sum_probs=43.6
Q ss_pred HHHHHHHHhcC--c----CccccceEEEEEeeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEeccCC
Q 045866 332 ATRLEKGLCEM--E----EVVAIHELHIWAITVGKVLLACHVKIKPEADADMVLENVIDYIKREYNISHVTIQIEREC 403 (406)
Q Consensus 332 ~~~i~~~l~~~--~----~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~~~~~i~~~v~~~l~~~~~i~~vtIqie~~~ 403 (406)
.+++++.|.++ | .+++..-++--.+.++++.+.+.+..+.-.-.+.+.+++++.+++..|+..|.|++..++
T Consensus 8 ~~~V~~aL~~V~DPel~~~iv~lG~V~~v~v~~~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~~p 85 (103)
T 3cq1_A 8 EAQAWALLEAVYDPELGLDVVNLGLIYDLVVEPPRAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTFEP 85 (103)
T ss_dssp HHHHHHHHTTCBCTTTCSBTTTTTCEEEEEEETTEEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECCSS
T ss_pred HHHHHHHHhCCCCCCCCcCchhcCceEEEEEECCEEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEecCC
Confidence 34566666653 2 133333333333456655555444444434677899999999976568999998887654
No 8
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=76.25 E-value=6.2 Score=31.34 Aligned_cols=46 Identities=4% Similarity=0.090 Sum_probs=34.9
Q ss_pred CeEEEEEEEEeCCCCCHHHHHHHHHHHH-HHhCCCceEEEEeccCCC
Q 045866 359 GKVLLACHVKIKPEADADMVLENVIDYI-KREYNISHVTIQIERECR 404 (406)
Q Consensus 359 g~~~~~v~V~v~~~~~~~~i~~~v~~~l-~~~~~i~~vtIqie~~~~ 404 (406)
+++.+.+.+..+.-...+.+.+++++.+ ++..|+..|.|++..++.
T Consensus 44 ~~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~p~ 90 (108)
T 3lno_A 44 NNAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWNPP 90 (108)
T ss_dssp CCEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCSSC
T ss_pred CeEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEecCC
Confidence 6666666666555557788999999999 666689999999876653
No 9
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=73.82 E-value=9 Score=29.97 Aligned_cols=69 Identities=17% Similarity=0.222 Sum_probs=44.0
Q ss_pred HHHHHHHHhcCc--C----ccc---cceEEEEEeeC-CeEEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEecc
Q 045866 332 ATRLEKGLCEME--E----VVA---IHELHIWAITV-GKVLLACHVKIKPEADADMVLENVIDYIKREYNISHVTIQIER 401 (406)
Q Consensus 332 ~~~i~~~l~~~~--~----V~~---v~~l~~w~~~~-g~~~~~v~V~v~~~~~~~~i~~~v~~~l~~~~~i~~vtIqie~ 401 (406)
.+++++.|.++. + +++ |.++.+ .+ |++.+.+.+..+.-.-.+.+.+++++.+++..|+..|.|++..
T Consensus 8 ~~~V~~aL~~V~DPel~~~iv~lG~V~~v~v---~~~~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~ 84 (103)
T 1uwd_A 8 KEDVLNALKNVIDFELGLDVVSLGLVYDIQI---DDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF 84 (103)
T ss_dssp HHHHHHHHTTCBCTTTSSBTTTTTCCCCEEE---CTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred HHHHHHHHcCCCCCCCCcChhhcCCeeEEEE---cCCCEEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEec
Confidence 456666666542 1 222 344443 44 6665555555444457788999999999765689999988876
Q ss_pred CC
Q 045866 402 EC 403 (406)
Q Consensus 402 ~~ 403 (406)
++
T Consensus 85 ~p 86 (103)
T 1uwd_A 85 DP 86 (103)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 10
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=62.10 E-value=54 Score=31.23 Aligned_cols=25 Identities=4% Similarity=0.192 Sum_probs=18.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcc
Q 045866 167 QGFLMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 167 ~~~~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
......++.++|++.|++..+.+.+
T Consensus 11 ~~~~~~~~~~~gi~gN~~vi~~~~~ 35 (452)
T 3rze_A 11 LVVVLSTICLVTVGLNLLVLYAVRS 35 (452)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456677889999999987776653
No 11
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=57.80 E-value=57 Score=31.22 Aligned_cols=22 Identities=14% Similarity=0.046 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 045866 170 LMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 170 ~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
...+++++|++.|++..+.+.+
T Consensus 29 ~~~~~~~~g~~gN~lvi~~~~~ 50 (467)
T 3uon_A 29 VAGSLSLVTIIGNILVMVSIKV 50 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHheeeeee
Confidence 4455678899999987776653
No 12
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=57.78 E-value=54 Score=25.13 Aligned_cols=64 Identities=9% Similarity=0.091 Sum_probs=42.3
Q ss_pred cccHHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCC-----CHHHHHHHHHHHHHHhCCCc
Q 045866 329 EVDATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEA-----DADMVLENVIDYIKREYNIS 393 (406)
Q Consensus 329 ~~~~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~-----~~~~i~~~v~~~l~~~~~i~ 393 (406)
...+..|++.+.++|+|....-+-+-. ..+.-.+.+.|.+.+.. +.+.+.+++++.++..+++.
T Consensus 13 nv~P~eIE~vl~~~p~v~~~~vv~v~~-~~~~~~~~~~V~~~~~~~~~~~~~~~l~~~i~~~l~~~~gv~ 81 (109)
T 3lax_A 13 NIFPIQIETILLQFKELGSDYLITLET-AESNDEMTVEVELSQLFTDDYGRLQALTREITRQLKDEILVT 81 (109)
T ss_dssp EECHHHHHHHHHTCTTEEEEEEEEEEE-ETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHHHSSC
T ss_pred EECHHHHHHHHHhCCCcccceEEEEec-cccceeEEEEEEEeeccccccchhhhhHHHHHHHHHHHhCCc
Confidence 356788999999999987765555443 23344455566666552 23456778888887777764
No 13
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=54.41 E-value=68 Score=31.58 Aligned_cols=20 Identities=10% Similarity=0.009 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 045866 171 MFVVSAIGLAVNIAMAFFLG 190 (406)
Q Consensus 171 ~~~v~~~~l~vn~~~~~~~~ 190 (406)
..++.++|++.|++..+.+.
T Consensus 47 ~~~i~~~gi~gN~lvi~~i~ 66 (500)
T 2rh1_A 47 MSLIVLAIVFGNVLVITAIA 66 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 44556788888887766654
No 14
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=51.96 E-value=73 Score=30.55 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 045866 171 MFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 171 ~~~v~~~~l~vn~~~~~~~~~ 191 (406)
..+++++|++.|++..+.+.+
T Consensus 41 ~~ii~i~gi~gN~lvi~vi~~ 61 (448)
T 2z73_A 41 IGICGIIGCGGNGIVIYLFTK 61 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHhhhhhhh
Confidence 345677888999987776653
No 15
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=50.99 E-value=82 Score=30.00 Aligned_cols=22 Identities=23% Similarity=0.389 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 045866 170 LMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 170 ~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
...+++++|++.|++..+.+.+
T Consensus 23 ~~~~~~~~gi~gN~lvi~~~~~ 44 (464)
T 4dkl_A 23 LYSIVCVVGLFGNFLVMYVIVR 44 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHeehhhhh
Confidence 4455678899999987766653
No 16
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=48.93 E-value=76 Score=30.54 Aligned_cols=22 Identities=18% Similarity=0.107 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 045866 169 FLMFVVSAIGLAVNIAMAFFLG 190 (406)
Q Consensus 169 ~~~~~v~~~~l~vn~~~~~~~~ 190 (406)
....++.++|++.|++..+.+.
T Consensus 25 ~~~~~i~~~~i~gN~lvi~~~~ 46 (484)
T 3vw7_A 25 SVYTGVFVVSLPLNIMAIVVFI 46 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677889999988766654
No 17
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=48.14 E-value=91 Score=23.92 Aligned_cols=69 Identities=9% Similarity=0.134 Sum_probs=44.0
Q ss_pred cccHHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCC------CHHHHHHHHHHHHHHhCCCceEEEEec
Q 045866 329 EVDATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEA------DADMVLENVIDYIKREYNISHVTIQIE 400 (406)
Q Consensus 329 ~~~~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~------~~~~i~~~v~~~l~~~~~i~~vtIqie 400 (406)
...+..|++.+.++|+|.....+-+.. ..+.=.+.+.|++ ++. +.+.+.+++++.+++.+++.- .|.+-
T Consensus 13 nv~P~eIE~~l~~~p~v~~~~~v~v~~-~~~~e~l~~~ve~-~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~-~v~~v 87 (109)
T 3gxs_A 13 NIFPIQIETILLQFKELGSDYLITLET-AESNDEMTVEVEL-SQLFTDDYGRLQALTREITRQLKDEILVTP-RVKLV 87 (109)
T ss_dssp EECHHHHHHHHHTCTTEEEEEEEEEEE-ETTEEEEEEEEEE-CTTCCCCHHHHHHHHHHHHHHHHHHHSSCC-EEEEE
T ss_pred EECHHHHHHHHHhCCCcCCcEEEEEEc-CCCceEEEEEEEE-cCccccchhHHHHHHHHHHHHHHHhhCCce-EEEEE
Confidence 356788999999999987555554443 2333334555666 432 345688889999987777653 44443
No 18
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=47.23 E-value=87 Score=30.03 Aligned_cols=23 Identities=4% Similarity=0.156 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 045866 169 FLMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 169 ~~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
...++++++|++.|++..+.+.+
T Consensus 26 ~~~~~i~~~gi~gN~lvi~~~~~ 48 (488)
T 3eml_A 26 TVELAIAVLAILGNVLVCWAVWL 48 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhheee
Confidence 34556788899999987766653
No 19
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=46.72 E-value=1.3e+02 Score=27.22 Aligned_cols=21 Identities=19% Similarity=0.490 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 045866 171 MFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 171 ~~~v~~~~l~vn~~~~~~~~~ 191 (406)
..++.++|++.|.+..+.+.+
T Consensus 45 ~~~i~~~gi~gN~lvi~~i~~ 65 (349)
T 1u19_A 45 MFLLIMLGFPINFLTLYVTVQ 65 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHheEeehhh
Confidence 345678889999887666643
No 20
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=44.31 E-value=1.2e+02 Score=27.70 Aligned_cols=20 Identities=10% Similarity=0.210 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 045866 171 MFVVSAIGLAVNIAMAFFLG 190 (406)
Q Consensus 171 ~~~v~~~~l~vn~~~~~~~~ 190 (406)
..+++++|++.|.+..+.+.
T Consensus 39 ~~~i~~~gi~gN~lvi~vi~ 58 (364)
T 2ks9_A 39 YTVIVVTSVVGNVVVMWIIL 58 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34567788889988766654
No 21
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=43.30 E-value=74 Score=31.35 Aligned_cols=23 Identities=9% Similarity=0.057 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 045866 169 FLMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 169 ~~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
..+.++.++|++.|.+..+.+.+
T Consensus 187 i~~~ii~~~gi~gN~lvi~vi~~ 209 (514)
T 3sn6_R 187 IVMSLIVLAIVFGNVLVITAIAK 209 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHhhhheec
Confidence 34556778899999987765543
No 22
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=42.55 E-value=36 Score=24.65 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=22.5
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 045866 121 ATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEA 155 (406)
Q Consensus 121 ~~~~~pyG~~R~E~l~~l~~~~~l~~~~~~i~~ea 155 (406)
.+..|-|-|.++. +++|+.+.+|+++++.++...
T Consensus 6 e~dpF~YDY~tLR-igGLifA~vLfi~GI~iilS~ 39 (67)
T 2jp3_A 6 KGSPFYYDWESLQ-LGGLIFGGLLCIAGIALALSG 39 (67)
T ss_dssp TTSGGGGGGHHHH-HHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCcccchHHhe-ecchhhHHHHHHHHHHHHHcC
Confidence 4455777777765 566777777777777765543
No 23
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=42.46 E-value=1.2e+02 Score=29.00 Aligned_cols=24 Identities=4% Similarity=-0.182 Sum_probs=17.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc
Q 045866 168 GFLMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 168 ~~~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
.....++.++|++.|++..+.+.+
T Consensus 42 ~~~~~~~~~~g~~gN~lvi~~~~~ 65 (481)
T 3pbl_A 42 ALSYCALILAIVFGNGLVCMAVLK 65 (481)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhh
Confidence 345667788999999988666653
No 24
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=41.14 E-value=1.4e+02 Score=28.72 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 045866 170 LMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 170 ~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
...++.++|++.|++..+.+.+
T Consensus 54 ~~~~i~~~g~~gN~lvi~~~~~ 75 (502)
T 3odu_A 54 IYSIIFLTGIVGNGLVILVMGY 75 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4455678899999988777754
No 25
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=39.62 E-value=1.4e+02 Score=28.07 Aligned_cols=22 Identities=5% Similarity=0.196 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 045866 170 LMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 170 ~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
..+++.++|++.|++..+.+.+
T Consensus 37 i~~~i~~~gi~gN~~vl~~~~~ 58 (447)
T 4eiy_A 37 VELAIAVLAILGNVLVCWAVWL 58 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455678899999987766653
No 26
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=38.10 E-value=1.7e+02 Score=27.94 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 045866 170 LMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 170 ~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
..+++.++|++.|.+..+.+.+
T Consensus 131 ~~~~i~~~gi~gN~lvi~~i~~ 152 (434)
T 4ea3_A 131 LYLAVCVGGLLGNCLVMYVILR 152 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHeeeeeee
Confidence 4455677899999887766653
No 27
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=35.41 E-value=1e+02 Score=23.72 Aligned_cols=67 Identities=6% Similarity=0.261 Sum_probs=41.1
Q ss_pred HHccCCCcccHHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEec
Q 045866 322 LMESTPREVDATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEADADMVLENVIDYIKREYNISHVTIQIE 400 (406)
Q Consensus 322 Ll~~~p~~~~~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~~~~~i~~~v~~~l~~~~~i~~vtIqie 400 (406)
|++..|. ..+.+.+.|.++||+ . ++.-.-..|++++.+. ..+.+++.+.+ +.|++..||..+..-..
T Consensus 11 vV~~~p~--~~~~V~~~L~~ipgv-E---i~~~~~~~GkiVV~iE-----a~~~~~l~~~i-~~I~~i~GVlst~lvy~ 77 (95)
T 2jsx_A 11 VVQAKSE--RISDISTQLNAFPGC-E---VAVSDAPSGQLIVVVE-----AEDSETLIQTI-ESVRNVEGVLAVSLVYH 77 (95)
T ss_dssp EEEECTT--SHHHHHHHHTTSTTE-E---EEEEETTTTEEEEEEE-----ESSHHHHHHHH-HHHTTSTTEEEEEESSC
T ss_pred EEEECCC--CHHHHHHHHHCCCCe-E---EEEecCCCCCEEEEEE-----eCCHHHHHHHH-HHHhcCCCccEEeEEEE
Confidence 3445554 357888999999987 3 3432211466654442 23666677766 77877778877766544
No 28
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=34.71 E-value=1e+02 Score=27.36 Aligned_cols=23 Identities=26% Similarity=0.310 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc
Q 045866 169 FLMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 169 ~~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
....++.++|++.|.+..+.+.+
T Consensus 16 ~~~~~~~~~gi~gN~lvi~~i~~ 38 (315)
T 4amj_A 16 LLMALVVLLIVAGNVLVIAAIGS 38 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHhhh
Confidence 45556788899999987776653
No 29
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=34.30 E-value=41 Score=24.79 Aligned_cols=32 Identities=16% Similarity=0.477 Sum_probs=21.2
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 045866 121 ATPRQSYGFFRIEILGALVSIQLIWLLAGILVY 153 (406)
Q Consensus 121 ~~~~~pyG~~R~E~l~~l~~~~~l~~~~~~i~~ 153 (406)
.+..|-|-|.++. +++|+.+.+|+++++.++.
T Consensus 8 ~~dpF~YDY~tLR-igGLifA~vLfi~GI~iil 39 (74)
T 2zxe_G 8 NDERFTYDYYRLR-VVGLIVAAVLCVIGIIILL 39 (74)
T ss_dssp CGGGGCCCHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcccchHHhe-eccchhHHHHHHHHHHHHH
Confidence 3445777777765 5667777777777776643
No 30
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=31.68 E-value=81 Score=22.90 Aligned_cols=59 Identities=15% Similarity=0.090 Sum_probs=33.5
Q ss_pred HHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEe
Q 045866 332 ATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEADADMVLENVIDYIKREYNISHVTIQI 399 (406)
Q Consensus 332 ~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~~~~~i~~~v~~~l~~~~~i~~vtIqi 399 (406)
.+++.+.+.++|+|..++.+ +| .+-+-+.|.++ +.+++.+-+.+.+.+..||..+.-.+
T Consensus 15 ~~~~~~~l~~~peV~e~~~v-----tG-~~D~ll~v~~~---d~~~l~~~i~~~l~~~~gV~~~~T~i 73 (83)
T 2cvi_A 15 EREVMEKLLAMPEVKEAYVV-----YG-EYDLIVKVETD---TLKDLDQFITEKIRKMPEIQMTSTMI 73 (83)
T ss_dssp HHHHHHHHHTSTTEEEEEEC-----BS-SCSEEEEEEES---SHHHHHHHHHTTGGGCTTEEEEEEEE
T ss_pred HHHHHHHHhCCCCeeEEEEE-----cc-cCCEEEEEEEC---CHHHHHHHHHHHhccCCCEeEEEEEE
Confidence 47888889999988665443 44 33333444543 34444333444665555676655444
No 31
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=27.31 E-value=2.6e+02 Score=27.47 Aligned_cols=22 Identities=9% Similarity=0.171 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 045866 170 LMFVVSAIGLAVNIAMAFFLGH 191 (406)
Q Consensus 170 ~~~~v~~~~l~vn~~~~~~~~~ 191 (406)
...++.++|++.|++..+.+.+
T Consensus 69 ~~~~i~~~g~~gN~lvi~vi~~ 90 (520)
T 3v2y_A 69 VFILICCFIILENIFVLLTIWK 90 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3445677899999987776653
No 32
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=25.83 E-value=76 Score=22.77 Aligned_cols=60 Identities=17% Similarity=0.153 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCcCccccceEEEEEeeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEec
Q 045866 332 ATRLEKGLCEMEEVVAIHELHIWAITVGKVLLACHVKIKPEADADMVLENVIDYIKREYNISHVTIQIE 400 (406)
Q Consensus 332 ~~~i~~~l~~~~~V~~v~~l~~w~~~~g~~~~~v~V~v~~~~~~~~i~~~v~~~l~~~~~i~~vtIqie 400 (406)
.+.+.+.+.+.|+|..++.+ +| .+-+-+.+.++ +.+++.+-+.+.+.+..||.++.-.+-
T Consensus 15 ~~~~~~~l~~~peV~~~~~v-----tG-~~d~l~~v~~~---d~~~l~~~~~~~l~~~~gV~~~~t~iv 74 (83)
T 2zbc_A 15 EDEVFERLKSMSEVTEVHVV-----YG-VYDIVVKVEAD---SMDKLKDFVTNTIRKLPKVRSTLTMII 74 (83)
T ss_dssp HHHHHHHHTTCTTEEEEEEC-----SS-SCSEEEEEECS---SHHHHHHHHHHTGGGSTTEEEEEEEEC
T ss_pred HHHHHHHHhCCCCeEEEEEE-----ec-cCCEEEEEEEC---CHHHHHHHHHHHhcCCCCEeEEEEEEE
Confidence 47788889999987655443 43 33333455543 333333334456665557776665554
No 33
>3kog_A Putative pore-forming toxin; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 1.85A {Bacteroides vulgatus atcc 8482}
Probab=25.12 E-value=22 Score=32.30 Aligned_cols=11 Identities=45% Similarity=0.915 Sum_probs=5.8
Q ss_pred CCCCCCCCCCC
Q 045866 195 HGHNHGHDHSH 205 (406)
Q Consensus 195 h~~~~~h~~~h 205 (406)
.+|+|.++|+|
T Consensus 228 ~~h~hap~~~h 238 (256)
T 3kog_A 228 PGHGHAPSHGH 238 (256)
T ss_dssp TTCSSCSBCBT
T ss_pred CCccccccccc
Confidence 45777733333
No 34
>3tuf_A Stage III sporulation protein AH; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_A
Probab=22.46 E-value=57 Score=28.83 Aligned_cols=52 Identities=15% Similarity=0.295 Sum_probs=33.2
Q ss_pred cccceEEEEEeeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHhCCC-ceEEEEeccC
Q 045866 346 VAIHELHIWAITVGKVLLACHVKIKPEADADMVLENVIDYIKREYNI-SHVTIQIERE 402 (406)
Q Consensus 346 ~~v~~l~~w~~~~g~~~~~v~V~v~~~~~~~~i~~~v~~~l~~~~~i-~~vtIqie~~ 402 (406)
.++.+.-++. .++.+ .|.|..+.-.+.-+.+|++.+.+..+| .+|+||++|.
T Consensus 144 KGF~DAVV~i-~dd~V----~VVVka~~Ls~~eaaqI~DIV~r~tgv~~dV~Vqf~p~ 196 (197)
T 3tuf_A 144 QGYEDALVNA-EGDKI----NITVKSDKHSKSKATAIIDLVAKEIKTMKDVAVTFEPS 196 (197)
T ss_dssp TTCSCEEEEC-SSSEE----EEEEECSCCCHHHHHHHHHTSCHHHHTTSEEEEEEECC
T ss_pred CCCCceEEEe-cCCEE----EEEEeCCCCCHHHHHHHHHHHHHhhCCCCceEEEeeeC
Confidence 3567776663 45544 344444433344466777878888887 7799999884
No 35
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=21.24 E-value=5e+02 Score=25.24 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCCchhhhHHHHHHHHH
Q 045866 269 VLGDSIQSVGVMIGGAIIWY--KPEWKIIDLICTLAFSA 305 (406)
Q Consensus 269 ~~~D~l~sv~vli~~~l~~~--~~~~~~~D~i~sliis~ 305 (406)
..+|.+.++.++--.+...+ ...|.+-+.+|-+...+
T Consensus 78 a~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~~~~ 116 (510)
T 4grv_A 78 ALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFL 116 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHHHHH
Confidence 56888877665543333222 22466666666655443
No 36
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=20.80 E-value=1.2e+02 Score=19.17 Aligned_cols=24 Identities=25% Similarity=0.332 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhC
Q 045866 66 KLLIVVVLCIIFMGVEVVGGMKAN 89 (406)
Q Consensus 66 ~l~i~~~~~~~~~~~e~v~g~~s~ 89 (406)
.|.+.+...++|++.-++.|+.+|
T Consensus 3 tLKi~Vy~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 3 TLKITVYIVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEeeehhHHHHHHHHHHccccCC
Confidence 355666666677777777777765
Done!