Your job contains 1 sequence.
>045871
MNNNRQHQPHVSPSSTDYSSFDFNLRPSKRRGSYNCGRCGQPKKGHSCHVGTPSTPSPPA
ATPAPSDSSAAISAPTSLSASRPPRHQHYSRFRRALSFDNIDLTCESPEPDFAIEELLDP
DPELSGGLPAAALWEVLRRLPPPGLLAAAQVCKGWRETSRRLWRAAEELRLRVPPRAQVG
FVGSVLQKCSALVRLSLTMESDVDATMLACIAFSCPNLESMEIYTSGSAVNRITGDELGR
FVADKRCLASLKMEGIFNCPNMREISLEFSRQENDSTDLTTMADGLGRNCPRLQNIHIAS
IRLSHSVVLALTAAGLRGLRMLSLVLGSEITDASVAAIASTYSKLELLDLSGSSISDSGI
GMICNVFPNTLSRLLLALCPNITSSGIQFATAQLPLLELMDCGMSICDPTSEDSNSDETC
DFELQKAFNNKLHLMYQKLIIKHCCLKKLSLWGCSGLDALCLNCPELNDLNLNSCRNLRP
ETLLLHCPRLESVHASGCQELLVDTIHSQVKNNPSALEDQYPFKRSADGSKRIRVPHSFS
Q
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045871
(541 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102400 - symbol:FBL17 "AT3G54650" species:370... 761 6.0e-133 2
>TAIR|locus:2102400 [details] [associations]
symbol:FBL17 "AT3G54650" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0001673 "male germ cell nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0009555 "pollen development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0048316 "seed development"
evidence=IMP] [GO:0055047 "generative cell mitosis" evidence=IMP]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 UniPathway:UPA00143
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0016567
GO:GO:0009790 GO:GO:0048316 GO:GO:0001673 GO:GO:0019005
GO:GO:0031146 EMBL:AL138650 EMBL:AF462827 EMBL:AY142006
IPI:IPI00534250 PIR:T47624 RefSeq:NP_567005.2 UniGene:At.1208
ProteinModelPortal:Q8W104 SMR:Q8W104 IntAct:Q8W104 STRING:Q8W104
PaxDb:Q8W104 PRIDE:Q8W104 EnsemblPlants:AT3G54650.1 GeneID:824630
KEGG:ath:AT3G54650 TAIR:At3g54650 eggNOG:NOG311289
HOGENOM:HOG000244167 InParanoid:Q8W104 OMA:RCGQPKK PhylomeDB:Q8W104
ProtClustDB:CLSN2680911 Genevestigator:Q8W104 GO:GO:0055047
Uniprot:Q8W104
Length = 593
Score = 761 (272.9 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 160/286 (55%), Positives = 186/286 (65%)
Query: 256 IFNCPNMREISLEFSRQENDSTDLTTMADGLGRNCPRLQNIHIASIRLSHSVVXXXXXXX 315
IFNCPN+ EISLEFSRQE+DSTDL TM DGLGR C RLQNIHIAS++LSH+VV
Sbjct: 291 IFNCPNLTEISLEFSRQEDDSTDLVTMVDGLGRTCTRLQNIHIASLKLSHTVVLSLTAVN 350
Query: 316 XXXXXXXSLVLGSEITDASVAAIASTYSKLEXXXXXXXXXXXXXXXMICNVFPNTLSRLL 375
SLVLG ITDASVAAI+S Y LE MIC+V P+TLS+LL
Sbjct: 351 FRYLRMLSLVLGINITDASVAAISSGYKNLELLDLSGSSITDTGLGMICDVLPDTLSKLL 410
Query: 376 LALCPNITSSGIQFATAQLPLLELMDCGMSICDPTSEDSNSDETCDFELQKAFNNKLHLM 435
+ALCPNITSSGIQFATAQLPLLELMDCGM++ DP S++ E +N K+ +
Sbjct: 411 VALCPNITSSGIQFATAQLPLLELMDCGMTVSDPNSDNPTFVENPSPHKTPGYNQKMFIK 470
Query: 436 YQXXXXXXXXXXXXXXWGCSGLDALCLNCPELNDLNLNSCRNLRPETLLLHCPRLESVHA 495
++ WGCS LDAL LNCPEL DLNLN C NL PE+L+L CP+L+ V+A
Sbjct: 471 HKRLKKLSL-------WGCSSLDALFLNCPELMDLNLNLCSNLHPESLVLQCPKLQLVYA 523
Query: 496 SGCQELLVDTIHSQVKNNPSALEDQYPFKRSADGSKRIRVPHSFSQ 541
SGCQ LL I QV N SA E+ P KR AD SKRI+ S Q
Sbjct: 524 SGCQGLLTGAIRKQVSENFSAGENHMPRKRLADASKRIQALPSLYQ 569
Score = 563 (203.2 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 135/305 (44%), Positives = 169/305 (55%)
Query: 6 QHQPHVSPSSTD--YSSFDFNLRPSKRRGSYNCGRCGQPKKGHSCHVGX---XXXXXXXX 60
Q QPH+SP++ S+ + R K RGSYNCGRCGQPKKGH C +
Sbjct: 2 QPQPHISPNTATAAISAALESQRSRKNRGSYNCGRCGQPKKGHVCLLTAPPDIPTTPIAS 61
Query: 61 XXXXXXXXXXXXXXXXXLS-ASRPPRHQHYSRFRRALSFDNIDL--TCESPEPDFAIEEL 117
LS + P Q ++ RRALSFD++D + + + D A +L
Sbjct: 62 EPVSCISAAASSSRSTVLSLTAAPSSRQTFTHLRRALSFDDVDARNSLDESDLDAASMDL 121
Query: 118 ---LDPDPELSGGLPAAALWEVLRRXXXXXXXXXXQVCKGWRETSXXXXXXXXXXXXXVP 174
LD D G A LWEVL+R +VCKGWRETS VP
Sbjct: 122 DLQLDTDIVQPGRFHAVGLWEVLKRLPPSSLLMAARVCKGWRETSRKMWKAAEELRIRVP 181
Query: 175 PRAQVGFVGSVLQKCSALVRLSLTMESDVDATMLACIAFSCPNLESMEIYTSGSAVNRIT 234
RAQ+G++GS+LQKC L+RLSL +ESD DAT LACIAFSCPNLE +EI TSG+AVNRI+
Sbjct: 182 ERAQIGYIGSLLQKCPRLIRLSLKIESDFDATTLACIAFSCPNLEVLEITTSGAAVNRIS 241
Query: 235 GDELGRFVADKRCLASLKMEGIFNCPNMREISLEFSRQEND-STDLTTMADGLGRNCPRL 293
GDEL RFVA+KR L SLKMEG C N+ SL S +DL +++ + NCP L
Sbjct: 242 GDELSRFVANKRGLTSLKMEG---CSNLGGFSLSSSSLSTLWLSDLHSLSKMIF-NCPNL 297
Query: 294 QNIHI 298
I +
Sbjct: 298 TEISL 302
Score = 47 (21.6 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 457 LDALCLNCPELNDLNLNSCRNLRPETLLLH--------CPRLESVH 494
L + NCP L +++L R T L+ C RL+++H
Sbjct: 287 LSKMIFNCPNLTEISLEFSRQEDDSTDLVTMVDGLGRTCTRLQNIH 332
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 541 449 0.00092 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 615 (65 KB)
Total size of DFA: 282 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.25u 0.19s 31.44t Elapsed: 00:00:02
Total cpu time: 31.25u 0.19s 31.44t Elapsed: 00:00:02
Start: Fri May 10 08:58:20 2013 End: Fri May 10 08:58:22 2013