Query 045873
Match_columns 868
No_of_seqs 442 out of 821
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 10:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045873.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045873hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v5n_A PDI-like hypothetical p 99.5 2.2E-15 7.6E-20 134.0 2.4 67 559-629 15-81 (89)
2 1v5n_A PDI-like hypothetical p 99.4 1.1E-14 3.6E-19 129.6 0.1 76 781-865 5-82 (89)
3 2fc7_A ZZZ3 protein; structure 95.8 0.0081 2.8E-07 52.1 4.4 51 177-230 21-76 (82)
4 3pfq_A PKC-B, PKC-beta, protei 95.4 0.0056 1.9E-07 73.5 2.9 89 414-502 47-148 (674)
5 3pfq_A PKC-B, PKC-beta, protei 95.3 0.0084 2.9E-07 71.9 4.0 96 114-212 49-149 (674)
6 1tot_A CREB-binding protein; z 95.1 0.0041 1.4E-07 49.2 0.2 41 113-169 6-47 (52)
7 2e5r_A Dystrobrevin alpha; ZZ 95.0 0.011 3.8E-07 48.7 2.6 48 178-228 12-61 (63)
8 2dip_A Zinc finger SWIM domain 94.9 0.0087 3E-07 53.7 1.9 45 178-229 32-77 (98)
9 2fc7_A ZZZ3 protein; structure 94.2 0.045 1.5E-06 47.4 4.6 49 539-589 21-75 (82)
10 1tot_A CREB-binding protein; z 93.6 0.033 1.1E-06 44.0 2.4 31 469-501 6-37 (52)
11 1ptq_A Protein kinase C delta 93.1 0.059 2E-06 41.8 3.2 33 45-80 10-45 (50)
12 2dip_A Zinc finger SWIM domain 93.0 0.035 1.2E-06 49.7 1.9 44 539-588 31-76 (98)
13 2ysm_A Myeloid/lymphoid or mix 92.5 0.3 1E-05 44.5 7.6 100 234-363 7-106 (111)
14 2enz_A NPKC-theta, protein kin 91.9 0.1 3.5E-06 42.9 3.3 33 45-80 22-57 (65)
15 2e5r_A Dystrobrevin alpha; ZZ 91.9 0.23 7.7E-06 40.8 5.3 39 45-85 10-49 (63)
16 3uej_A NPKC-delta, protein kin 91.4 0.11 3.7E-06 42.8 3.0 33 45-80 19-54 (65)
17 1ptq_A Protein kinase C delta 91.3 0.12 4E-06 40.1 2.9 35 414-448 10-45 (50)
18 1y8f_A UNC-13 homolog A, MUNC1 91.3 0.11 3.8E-06 42.9 2.9 33 45-80 23-58 (66)
19 1kbe_A Kinase suppressor of RA 90.7 0.17 5.9E-06 39.3 3.2 42 582-628 5-46 (49)
20 1kbe_A Kinase suppressor of RA 90.5 0.2 6.9E-06 39.0 3.5 32 539-571 14-45 (49)
21 2enz_A NPKC-theta, protein kin 90.5 0.25 8.5E-06 40.6 4.3 45 402-448 12-57 (65)
22 2yuu_A NPKC-delta, protein kin 90.5 0.17 5.9E-06 43.7 3.5 33 45-80 27-62 (83)
23 1faq_A RAF-1; transferase, ser 90.0 0.19 6.5E-06 39.2 3.0 33 413-448 12-44 (52)
24 1rfh_A RAS association (ralgds 89.4 0.23 7.7E-06 40.1 3.1 44 457-501 9-53 (59)
25 2fnf_X Putative RAS effector N 89.3 0.32 1.1E-05 40.9 4.1 33 113-146 35-67 (72)
26 3uej_A NPKC-delta, protein kin 89.2 0.4 1.4E-05 39.3 4.5 33 773-805 20-54 (65)
27 1faq_A RAF-1; transferase, ser 88.4 0.21 7.2E-06 38.9 2.2 32 113-146 14-45 (52)
28 2db6_A SH3 and cysteine rich d 88.4 0.29 9.8E-06 41.4 3.2 42 529-570 17-62 (74)
29 2row_A RHO-associated protein 88.1 0.16 5.5E-06 44.1 1.5 32 45-79 34-70 (84)
30 2fnf_X Putative RAS effector N 88.1 0.29 1E-05 41.2 3.1 43 402-448 23-66 (72)
31 2yuu_A NPKC-delta, protein kin 88.1 0.36 1.2E-05 41.7 3.7 45 402-448 17-62 (83)
32 2eli_A Protein kinase C alpha 88.1 0.26 9E-06 42.8 2.8 33 45-80 27-62 (85)
33 2ysm_A Myeloid/lymphoid or mix 87.8 1.8 6.3E-05 39.1 8.5 72 649-742 8-85 (111)
34 2kwj_A Zinc finger protein DPF 87.6 0.24 8.3E-06 45.5 2.5 96 596-721 3-110 (114)
35 4b6d_A RAC GTPase-activating p 87.6 0.25 8.4E-06 40.3 2.2 34 414-447 18-51 (61)
36 1rfh_A RAS association (ralgds 87.4 0.24 8E-06 40.0 2.0 43 402-448 10-53 (59)
37 3v43_A Histone acetyltransfera 87.3 0.44 1.5E-05 43.5 4.0 96 594-719 5-112 (112)
38 2enn_A NPKC-theta, protein kin 86.9 0.36 1.2E-05 41.1 2.9 45 402-448 23-68 (77)
39 3v43_A Histone acetyltransfera 86.8 0.46 1.6E-05 43.4 3.8 76 649-742 6-93 (112)
40 2eli_A Protein kinase C alpha 86.5 0.71 2.4E-05 40.0 4.7 45 402-448 17-62 (85)
41 2db6_A SH3 and cysteine rich d 86.4 0.25 8.6E-06 41.8 1.7 45 401-447 16-61 (74)
42 1y8f_A UNC-13 homolog A, MUNC1 86.0 0.4 1.4E-05 39.5 2.7 45 402-448 13-58 (66)
43 2ku3_A Bromodomain-containing 85.7 0.33 1.1E-05 40.8 2.0 50 648-720 16-67 (71)
44 2enn_A NPKC-theta, protein kin 85.7 0.55 1.9E-05 39.9 3.5 45 457-501 22-68 (77)
45 4gne_A Histone-lysine N-methyl 83.6 2.7 9.3E-05 38.1 7.2 71 648-744 15-87 (107)
46 1f62_A Transcription factor WS 82.8 0.74 2.5E-05 35.7 2.8 31 290-320 2-32 (51)
47 4b6d_A RAC GTPase-activating p 82.3 0.65 2.2E-05 37.8 2.3 32 711-742 20-51 (61)
48 2k16_A Transcription initiatio 81.5 0.76 2.6E-05 38.7 2.6 54 648-722 18-71 (75)
49 2ku3_A Bromodomain-containing 81.3 0.62 2.1E-05 39.1 1.9 34 288-321 16-51 (71)
50 2kwj_A Zinc finger protein DPF 81.2 1.4 4.9E-05 40.3 4.6 74 650-742 3-89 (114)
51 3asl_A E3 ubiquitin-protein li 78.4 2.3 7.8E-05 35.5 4.5 31 290-320 20-50 (70)
52 2lri_C Autoimmune regulator; Z 77.8 1.7 5.7E-05 35.9 3.4 51 288-364 12-62 (66)
53 1f62_A Transcription factor WS 77.6 1.3 4.5E-05 34.2 2.7 49 650-719 2-50 (51)
54 2lv9_A Histone-lysine N-methyl 75.2 3.6 0.00012 36.5 5.2 32 289-321 29-60 (98)
55 4gne_A Histone-lysine N-methyl 74.6 4.2 0.00014 36.8 5.5 71 288-387 15-87 (107)
56 2e6s_A E3 ubiquitin-protein li 73.8 4.7 0.00016 34.2 5.3 32 290-321 28-59 (77)
57 2row_A RHO-associated protein 73.6 1.3 4.5E-05 38.4 1.8 35 413-447 33-70 (84)
58 2lri_C Autoimmune regulator; Z 73.2 2.9 9.8E-05 34.5 3.7 50 649-722 13-62 (66)
59 3asl_A E3 ubiquitin-protein li 72.5 3.5 0.00012 34.3 4.1 30 650-679 20-49 (70)
60 3shb_A E3 ubiquitin-protein li 69.0 5.3 0.00018 33.9 4.5 32 290-321 28-59 (77)
61 2e6s_A E3 ubiquitin-protein li 68.2 5.5 0.00019 33.8 4.5 30 650-679 28-57 (77)
62 2l5u_A Chromodomain-helicase-D 68.1 4.3 0.00015 32.7 3.6 48 648-719 11-58 (61)
63 2lv9_A Histone-lysine N-methyl 67.3 6.1 0.00021 35.0 4.8 48 649-719 29-76 (98)
64 2k16_A Transcription initiatio 66.4 6.4 0.00022 32.9 4.5 52 773-841 18-69 (75)
65 1we9_A PHD finger family prote 66.4 4.9 0.00017 32.5 3.7 54 414-478 5-58 (64)
66 2l5u_A Chromodomain-helicase-D 65.9 3.4 0.00011 33.4 2.6 48 288-361 11-58 (61)
67 2l43_A N-teminal domain from h 63.0 2.8 9.5E-05 36.6 1.7 51 648-721 25-77 (88)
68 2yql_A PHD finger protein 21A; 61.1 7.8 0.00027 30.5 3.9 29 648-679 9-37 (56)
69 2e6r_A Jumonji/ARID domain-con 61.0 4.8 0.00016 35.3 2.9 51 288-361 16-66 (92)
70 3o70_A PHD finger protein 13; 60.7 8.4 0.00029 31.8 4.1 33 288-321 19-51 (68)
71 1mm2_A MI2-beta; PHD, zinc fin 60.5 6.5 0.00022 31.7 3.3 49 288-362 9-57 (61)
72 1wen_A Inhibitor of growth fam 60.1 12 0.0004 31.2 4.9 51 648-723 16-69 (71)
73 1fp0_A KAP-1 corepressor; PHD 59.6 13 0.00046 32.3 5.4 49 288-362 25-73 (88)
74 2yql_A PHD finger protein 21A; 58.7 8.1 0.00028 30.4 3.6 31 288-321 9-39 (56)
75 1r79_A Diacylglycerol kinase, 58.6 4.1 0.00014 35.2 1.9 44 458-501 27-73 (84)
76 1xwh_A Autoimmune regulator; P 58.2 7.6 0.00026 31.7 3.4 49 648-720 8-56 (66)
77 1mm2_A MI2-beta; PHD, zinc fin 57.3 6.8 0.00023 31.5 3.0 49 648-720 9-57 (61)
78 2e6r_A Jumonji/ARID domain-con 57.2 5.2 0.00018 35.1 2.4 50 649-719 17-66 (92)
79 1xwh_A Autoimmune regulator; P 56.3 7.5 0.00026 31.8 3.1 49 288-362 8-56 (66)
80 2yt5_A Metal-response element- 56.1 8.5 0.00029 31.2 3.4 34 288-321 6-41 (66)
81 2l43_A N-teminal domain from h 54.7 3.6 0.00012 35.8 1.0 51 288-363 25-77 (88)
82 1wen_A Inhibitor of growth fam 53.0 18 0.00062 30.0 4.9 50 288-364 16-68 (71)
83 3ky9_A Proto-oncogene VAV; cal 52.8 6.5 0.00022 46.0 3.0 34 45-81 528-564 (587)
84 3shb_A E3 ubiquitin-protein li 52.0 14 0.00048 31.3 4.2 30 650-679 28-57 (77)
85 3c6w_A P28ING5, inhibitor of g 52.0 8.1 0.00028 30.9 2.5 47 648-719 9-58 (59)
86 1wee_A PHD finger family prote 52.0 15 0.00051 30.4 4.3 32 289-321 17-49 (72)
87 1we9_A PHD finger family prote 51.5 12 0.00042 30.0 3.6 32 711-742 7-38 (64)
88 2puy_A PHD finger protein 21A; 51.1 8.2 0.00028 30.8 2.5 49 649-721 6-54 (60)
89 2puy_A PHD finger protein 21A; 50.9 8.5 0.00029 30.7 2.5 49 288-362 5-53 (60)
90 1fp0_A KAP-1 corepressor; PHD 50.0 23 0.00077 30.8 5.2 49 648-720 25-73 (88)
91 1r79_A Diacylglycerol kinase, 49.8 9 0.00031 33.1 2.6 45 162-209 26-72 (84)
92 2vrw_B P95VAV, VAV1, proto-onc 49.8 8.5 0.00029 42.6 3.2 33 45-80 356-391 (406)
93 3ask_A E3 ubiquitin-protein li 49.3 14 0.00046 37.9 4.3 32 290-321 176-207 (226)
94 2xb1_A Pygopus homolog 2, B-ce 48.8 12 0.00042 33.5 3.5 31 711-741 4-35 (105)
95 3o36_A Transcription intermedi 45.8 18 0.00061 35.5 4.5 57 289-372 5-61 (184)
96 2vnf_A ING 4, P29ING4, inhibit 45.6 11 0.00039 30.1 2.5 47 648-719 10-59 (60)
97 1wev_A Riken cDNA 1110020M19; 45.3 9.3 0.00032 33.1 2.1 56 649-721 17-74 (88)
98 1wee_A PHD finger family prote 45.0 13 0.00044 30.8 2.8 52 414-478 15-66 (72)
99 3u5n_A E3 ubiquitin-protein li 44.4 22 0.00075 35.6 5.0 59 288-373 7-65 (207)
100 1weu_A Inhibitor of growth fam 43.2 21 0.00071 31.2 4.0 51 648-723 36-89 (91)
101 3o7a_A PHD finger protein 13 v 42.9 15 0.0005 28.4 2.7 29 293-321 8-36 (52)
102 3ky9_A Proto-oncogene VAV; cal 42.5 13 0.00044 43.5 3.3 46 401-448 517-563 (587)
103 3c6w_A P28ING5, inhibitor of g 42.4 14 0.00046 29.6 2.4 32 288-321 9-43 (59)
104 1wev_A Riken cDNA 1110020M19; 41.6 20 0.00069 31.0 3.6 33 289-321 17-51 (88)
105 3ask_A E3 ubiquitin-protein li 41.5 18 0.00062 37.0 3.8 49 650-719 176-225 (226)
106 2yt5_A Metal-response element- 41.2 25 0.00087 28.3 4.0 56 648-721 6-63 (66)
107 1wew_A DNA-binding family prot 41.0 18 0.00062 30.5 3.2 33 288-321 16-50 (78)
108 2vpb_A Hpygo1, pygopus homolog 40.9 14 0.00049 30.1 2.4 31 711-741 9-40 (65)
109 1wew_A DNA-binding family prot 40.9 20 0.00068 30.2 3.4 58 648-722 16-75 (78)
110 2rsd_A E3 SUMO-protein ligase 40.6 27 0.00091 28.6 4.0 54 648-719 10-65 (68)
111 3cxl_A N-chimerin; SH2, RHO-GA 40.2 14 0.00049 41.7 3.2 34 45-81 219-255 (463)
112 2g6q_A Inhibitor of growth pro 39.9 17 0.00057 29.4 2.6 47 648-719 11-60 (62)
113 2vpb_A Hpygo1, pygopus homolog 37.7 19 0.00066 29.3 2.7 38 773-810 8-47 (65)
114 3o36_A Transcription intermedi 37.3 30 0.001 33.9 4.6 58 649-731 5-62 (184)
115 2vnf_A ING 4, P29ING4, inhibit 37.2 17 0.00059 29.0 2.3 31 289-321 11-44 (60)
116 2vrw_B P95VAV, VAV1, proto-onc 37.1 17 0.0006 40.0 3.2 33 469-501 357-391 (406)
117 3o70_A PHD finger protein 13; 34.8 31 0.0011 28.3 3.6 49 414-477 18-66 (68)
118 3u5n_A E3 ubiquitin-protein li 34.2 36 0.0012 34.0 4.7 57 649-730 8-64 (207)
119 2ro1_A Transcription intermedi 33.1 23 0.00077 35.2 2.9 49 289-363 3-51 (189)
120 2xb1_A Pygopus homolog 2, B-ce 33.0 22 0.00076 31.8 2.6 35 178-212 4-39 (105)
121 3cxl_A N-chimerin; SH2, RHO-GA 32.7 19 0.00064 40.8 2.5 43 581-626 209-254 (463)
122 2uzg_A Ubiquitin carboxyl-term 32.5 32 0.0011 30.3 3.5 65 647-723 24-93 (97)
123 3lqh_A Histone-lysine N-methyl 30.3 34 0.0012 33.8 3.6 32 708-741 2-36 (183)
124 2g6q_A Inhibitor of growth pro 30.1 27 0.00094 28.1 2.4 32 288-321 11-45 (62)
125 1z60_A TFIIH basal transcripti 30.0 16 0.00054 29.4 0.9 32 774-805 16-47 (59)
126 2jmi_A Protein YNG1, ING1 homo 29.2 34 0.0012 29.8 3.0 48 648-720 26-77 (90)
127 1weu_A Inhibitor of growth fam 29.1 39 0.0013 29.5 3.4 50 288-364 36-88 (91)
128 2jmi_A Protein YNG1, ING1 homo 27.8 32 0.0011 30.0 2.6 32 288-321 26-60 (90)
129 2lq6_A Bromodomain-containing 27.7 25 0.00087 30.3 1.9 41 529-570 6-50 (87)
130 2dlq_A GLI-kruppel family memb 26.9 42 0.0014 29.3 3.4 13 469-481 94-106 (124)
131 2kgg_A Histone demethylase jar 26.7 46 0.0016 25.6 3.1 30 712-741 4-34 (52)
132 2dkt_A Ring finger and CHY zin 26.1 68 0.0023 30.4 4.7 54 416-494 72-125 (143)
133 1weo_A Cellulose synthase, cat 23.4 45 0.0015 28.9 2.6 38 414-451 15-55 (93)
134 1wem_A Death associated transc 22.9 54 0.0018 27.2 3.0 36 773-809 16-51 (76)
135 2ro1_A Transcription intermedi 21.4 66 0.0022 31.7 3.8 49 649-721 3-51 (189)
136 2jun_A Midline-1; B-BOX, TRIM, 21.1 32 0.0011 29.9 1.3 33 773-805 3-35 (101)
137 3o7a_A PHD finger protein 13 v 20.3 75 0.0025 24.3 3.1 30 653-684 8-37 (52)
138 2kgg_A Histone demethylase jar 20.0 59 0.002 25.0 2.5 34 180-213 5-39 (52)
No 1
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.52 E-value=2.2e-15 Score=134.01 Aligned_cols=67 Identities=33% Similarity=0.656 Sum_probs=61.4
Q ss_pred CCccccccccCCCceecCCCCCCCceEEEecccccccccccceecccCCceEEcCCcCcccccccccCccc
Q 045873 559 CMFNIHESCAELPQEVRHPFHPRHSLTVQENTFQSRYFCDACRFDVKPGLRYRCDECDFDLHLECLSLKAN 629 (868)
Q Consensus 559 Cdf~lH~~Ca~lP~~i~H~~h~~HpL~L~~~~~~~~~~C~~C~~~~~~g~~Y~C~~C~~~lH~~Ca~~p~p 629 (868)
++.+||++||++|++|+||+||+|||+|.... .++|++|++.. .+|+|+|..|+|+||+.||++|++
T Consensus 15 ~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~~---~~~C~~C~~~~-~~~~Y~C~~C~f~lH~~Ca~~p~~ 81 (89)
T 1v5n_A 15 IEAKYDEIAKDWPKKVKHVLHEEHELELTRVQ---VYTCDKCEEEG-TIWSYHCDECDFDLHAKCALNEDT 81 (89)
T ss_dssp HHHHHHHHTSSSCSEECCSTTTTSCEEEECCS---SCCCTTTSCCC-CSCEEECTTTCCCCCHHHHHCSSC
T ss_pred HHHHHhHHHHcCCceecCCCCCCCccEEeeCC---CeEeCCCCCcC-CCcEEEcCCCCCeEcHHhcCCCCc
Confidence 45799999999999999999999999998753 68999999998 899999999999999999988765
No 2
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.43 E-value=1.1e-14 Score=129.64 Aligned_cols=76 Identities=22% Similarity=0.440 Sum_probs=65.1
Q ss_pred ccccCCCcEeeecCCceeehhhhcCCccccccccc-cceEEeecCCCCCcceeeccccccccccEEEeeCce-EEEeeee
Q 045873 781 KLVRGQPTYGCDQCRFYLHKSCAELPRQIQHALHR-HSLILKSHTDEGTKEDHECGACLKKLSGFFYQCDNC-FVMDIDC 858 (868)
Q Consensus 781 ~~i~~~~~y~C~~CdFilH~~CA~lPr~k~h~~h~-h~ltL~~~~~~~~~~~~~C~~C~~~~~gf~Y~c~~c-~~ldv~C 858 (868)
.|+.+...|.+ +.+||+.||+||++++|++|+ |||+|.+. ..|+|++|.+...||+|.|..| |.||++|
T Consensus 5 ~pfte~~~~~~---~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~------~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~C 75 (89)
T 1v5n_A 5 SSGTEERLKEI---EAKYDEIAKDWPKKVKHVLHEEHELELTRV------QVYTCDKCEEEGTIWSYHCDECDFDLHAKC 75 (89)
T ss_dssp CCCCSSCCSHH---HHHHHHHTSSSCSEECCSTTTTSCEEEECC------SSCCCTTTSCCCCSCEEECTTTCCCCCHHH
T ss_pred cccCHHHHHHH---HHHHhHHHHcCCceecCCCCCCCccEEeeC------CCeEeCCCCCcCCCcEEEcCCCCCeEcHHh
Confidence 46666666655 469999999999999999995 99999753 1589999999999999999999 9999999
Q ss_pred eeeccCC
Q 045873 859 ALSQFGG 865 (868)
Q Consensus 859 a~~~~~~ 865 (868)
|+....+
T Consensus 76 a~~p~~~ 82 (89)
T 1v5n_A 76 ALNEDTK 82 (89)
T ss_dssp HHCSSCS
T ss_pred cCCCCcc
Confidence 9877654
No 3
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=95.76 E-value=0.0081 Score=52.13 Aligned_cols=51 Identities=22% Similarity=0.371 Sum_probs=38.2
Q ss_pred CCccccCcCCCCCCCCcEEeccC-C---CccccccCCCCccccCCCC-CCCceEEeecC
Q 045873 177 DTKCKFCCKSIHGSQSYYCCGPC-N---FYIHKSCSELPQQVRHPFH-PCHSLTLQNND 230 (868)
Q Consensus 177 ~~~C~~C~~~~~~~~~~Y~C~~C-d---~~~H~~C~~~p~~i~Hp~H-p~H~L~L~~~~ 230 (868)
++.||+|++. .+.|.+|+|..| | |+|...|.....+. ..| |.|+++.+..+
T Consensus 21 ~~~Cd~C~~~-pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~--~~H~~~H~~~~i~~~ 76 (82)
T 2fc7_A 21 GFKCDNCGIE-PIQGVRWHCQDCPPEMSLDFCDSCSDCLHET--DIHKEDHQLEPIYRS 76 (82)
T ss_dssp SCCCSSSCCS-SEESCEEEESSSCSSSCCEEEGGGTTCCCCC--SSCCSSSCEEEECSC
T ss_pred cCCCCCCCCC-cceeceEECCcCCCCcceecHHHHHhCcccc--CCCCCCCCEEEeeCC
Confidence 3689999852 236789999999 7 99999999764321 134 68999988753
No 4
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=95.40 E-value=0.0056 Score=73.49 Aligned_cols=89 Identities=25% Similarity=0.554 Sum_probs=34.2
Q ss_pred CCCcCcccccccccC-CCcEEecCCCcccccccCCCCCc-----ee-----cccCCCCccccCCccccccccccceecCc
Q 045873 414 DDIECHACENLIIQG-HSAYGCDPCRFYLHKSCFELPKV-----MK-----HISDSHYLTLQNSSFSERCTACGQQLKGN 482 (868)
Q Consensus 414 ~~~~C~aC~~~~~~~-~~~Y~C~~C~F~lH~~C~~lPr~-----i~-----h~~~~~~L~~~~~~~~~~C~~C~~~~~g~ 482 (868)
.+..|+.|+..+++. ...|.|..|++.+|+.|..+-.. .. ....+|.+...+......|+.|++.+.|.
T Consensus 47 ~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~~~~~C~~C~~~l~g~ 126 (674)
T 3pfq_A 47 QPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGL 126 (674)
T ss_dssp -------------------------------------------------------CCCCCEECCSSCCCCSSSCSCCBBS
T ss_pred CCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCCCCCCCCccccccchh
Confidence 467899999988721 36799999999999999874211 11 11234555544333355899999988764
Q ss_pred --eeEeeccCCeeecccccccc
Q 045873 483 --AIYHCETCDFDLDLDCAAQH 502 (868)
Q Consensus 483 --~~Y~C~~C~~~lh~~Ca~~~ 502 (868)
.+|+|..|++.+|.+|+...
T Consensus 127 ~~qg~~C~~C~~~~H~~C~~~v 148 (674)
T 3pfq_A 127 IHQGMKCDTCMMNVHKRCVMNV 148 (674)
T ss_dssp SSCEECCSSSCCCBCSSTTSSS
T ss_pred hcCccccccCCcchhhhhhhcc
Confidence 47999999999999999873
No 5
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=95.31 E-value=0.0084 Score=71.95 Aligned_cols=96 Identities=18% Similarity=0.343 Sum_probs=31.8
Q ss_pred ccCCcccccCCCC--CceecCCCCceeccccccccccccCCCccccc--CCCCcCCCcccccccccCCCccccCcCCCCC
Q 045873 114 FDCDYCDESHKDN--PFLCCDFCNFQIGAPCATTLIKYHRGQEEHIQ--HFSHRHPLILLEMELEAEDTKCKFCCKSIHG 189 (868)
Q Consensus 114 ~~C~~C~k~~~~~--~~y~C~~Cdf~lh~~Ca~~~~~~~~~~~~~i~--hf~H~H~L~~~~~~~~~~~~~C~~C~~~~~~ 189 (868)
-+|+.|+..+.+. .+|.|+.|.|.+|..|.......-.+...... -..-.|.+...+.. ....|+.|++.+.+
T Consensus 49 ~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~~~~~~~~~~~~~h~~~~~~~~---~~~~C~~C~~~l~g 125 (674)
T 3pfq_A 49 TFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYS---SPTFCDHCGSLLYG 125 (674)
T ss_dssp -----------------------------------------------------CCCCCEECCS---SCCCCSSSCSCCBB
T ss_pred CccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCcccccccccccCCcceeecCCC---CCCCCCccccccch
Confidence 4799999988764 46899999999999999755322211110000 00113555543332 12479999876532
Q ss_pred C-CCcEEeccCCCccccccCCCCc
Q 045873 190 S-QSYYCCGPCNFYIHKSCSELPQ 212 (868)
Q Consensus 190 ~-~~~Y~C~~Cd~~~H~~C~~~p~ 212 (868)
. ..+|+|..|+..+|..|+..-+
T Consensus 126 ~~~qg~~C~~C~~~~H~~C~~~v~ 149 (674)
T 3pfq_A 126 LIHQGMKCDTCMMNVHKRCVMNVP 149 (674)
T ss_dssp SSSCEECCSSSCCCBCSSTTSSSC
T ss_pred hhcCccccccCCcchhhhhhhccC
Confidence 1 2489999999999999997543
No 6
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=95.08 E-value=0.0041 Score=49.20 Aligned_cols=41 Identities=22% Similarity=0.663 Sum_probs=32.9
Q ss_pred cccCCcccccCCCCCceecCCC-CceeccccccccccccCCCcccccCCCCcCCCccc
Q 045873 113 AFDCDYCDESHKDNPFLCCDFC-NFQIGAPCATTLIKYHRGQEEHIQHFSHRHPLILL 169 (868)
Q Consensus 113 ~~~C~~C~k~~~~~~~y~C~~C-df~lh~~Ca~~~~~~~~~~~~~i~hf~H~H~L~~~ 169 (868)
...||.|.+.+ +. .|+|..| ||||+..|.... .|.|++...
T Consensus 6 ~~~Cd~C~~~i-g~-R~~C~~C~dyDLC~~C~~~~--------------~H~H~m~~~ 47 (52)
T 1tot_A 6 VYTCNECKHHV-ET-RWHCTVCEDYDLCINCYNTK--------------SHTHKMVKW 47 (52)
T ss_dssp CEEETTTTEEE-SS-EEEESSSSSCEECHHHHHHH--------------CCCSSEEEE
T ss_pred EEECCCCCCCC-cc-eEEcCCCCCchhHHHHHhCC--------------CCCCceEEe
Confidence 46799999985 44 4799999 999999999753 468888754
No 7
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.01 E-value=0.011 Score=48.65 Aligned_cols=48 Identities=19% Similarity=0.432 Sum_probs=36.3
Q ss_pred CccccCcCCCCCCCCcEEeccC-CCccccccCCCCccc-cCCCCCCCceEEee
Q 045873 178 TKCKFCCKSIHGSQSYYCCGPC-NFYIHKSCSELPQQV-RHPFHPCHSLTLQN 228 (868)
Q Consensus 178 ~~C~~C~~~~~~~~~~Y~C~~C-d~~~H~~C~~~p~~i-~Hp~Hp~H~L~L~~ 228 (868)
..|++|++. .+.|.+|+|..| ||+|..+|.....+. .|. +.||++.+.
T Consensus 12 ~~Cd~C~~~-pi~G~RykC~~C~d~DLC~~C~~~g~~~~~H~--~~H~~~~~~ 61 (63)
T 2e5r_A 12 VECSYCHSE-SMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHS--NQHQMKEYT 61 (63)
T ss_dssp SCCSSSCCC-SSCSCEEEESSCSSCEECHHHHHHCCCCSSSC--TTCCEEEEC
T ss_pred CCCcCCCCc-ceecceEEecCCCCchhHHHHHhCCCcCCCCC--CCCCEEEEe
Confidence 579999854 237889999999 999999998765543 332 468887654
No 8
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=94.92 E-value=0.0087 Score=53.68 Aligned_cols=45 Identities=20% Similarity=0.507 Sum_probs=35.8
Q ss_pred CccccCcCCCCCCCCcEEeccC-CCccccccCCCCccccCCCCCCCceEEeec
Q 045873 178 TKCKFCCKSIHGSQSYYCCGPC-NFYIHKSCSELPQQVRHPFHPCHSLTLQNN 229 (868)
Q Consensus 178 ~~C~~C~~~~~~~~~~Y~C~~C-d~~~H~~C~~~p~~i~Hp~Hp~H~L~L~~~ 229 (868)
..|++|+.. .+.|.+|+|..| ||+|..+|.... .||.|+|+.+..
T Consensus 32 v~Cd~C~~~-pI~G~RykC~~C~d~DLC~~C~~~~------~H~~H~f~~i~~ 77 (98)
T 2dip_A 32 IPCNNCKQF-PIEGKCYKCTECIEYHLCQECFDSY------CHLSHTFTFREK 77 (98)
T ss_dssp CCCSSSCCS-SCCSCEEEESSSSSCEEEHHHHHTT------SGGGSCEEECCS
T ss_pred CCCcCCCCC-CcccCeEECCCCCCccHHHHHHccC------CCCCCCeeEecC
Confidence 689999853 237789999999 999999998754 257889887654
No 9
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=94.17 E-value=0.045 Score=47.41 Aligned_cols=49 Identities=24% Similarity=0.560 Sum_probs=38.1
Q ss_pred Ccccccccc-cccCCeeeeccC-C---ccccccccCCCcee-cCCCCCCCceEEEec
Q 045873 539 DAECQLCHK-NIHGTSYGCTPC-M---FNIHESCAELPQEV-RHPFHPRHSLTVQEN 589 (868)
Q Consensus 539 ~~~C~~C~~-~i~~~~Y~C~~C-d---f~lH~~Ca~lP~~i-~H~~h~~HpL~L~~~ 589 (868)
...|++|.. +|.|..|+|.+| | |+|.+.|.....+. .| .+.|+++....
T Consensus 21 ~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~~~~~H--~~~H~~~~i~~ 75 (82)
T 2fc7_A 21 GFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLHETDIH--KEDHQLEPIYR 75 (82)
T ss_dssp SCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCCCCSSC--CSSSCEEEECS
T ss_pred cCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCccccCCC--CCCCCEEEeeC
Confidence 457999996 688999999999 7 99999999875432 23 25688887654
No 10
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=93.60 E-value=0.033 Score=43.98 Aligned_cols=31 Identities=29% Similarity=0.884 Sum_probs=27.5
Q ss_pred ccccccccceecCceeEeeccC-Ceeeccccccc
Q 045873 469 SERCTACGQQLKGNAIYHCETC-DFDLDLDCAAQ 501 (868)
Q Consensus 469 ~~~C~~C~~~~~g~~~Y~C~~C-~~~lh~~Ca~~ 501 (868)
...|++|.+.+ |. +|+|.+| +|+|-..|.+.
T Consensus 6 ~~~Cd~C~~~i-g~-R~~C~~C~dyDLC~~C~~~ 37 (52)
T 1tot_A 6 VYTCNECKHHV-ET-RWHCTVCEDYDLCINCYNT 37 (52)
T ss_dssp CEEETTTTEEE-SS-EEEESSSSSCEECHHHHHH
T ss_pred EEECCCCCCCC-cc-eEEcCCCCCchhHHHHHhC
Confidence 56899999986 65 7999999 99999999887
No 11
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=93.13 E-value=0.059 Score=41.78 Aligned_cols=33 Identities=27% Similarity=0.486 Sum_probs=28.6
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAEL 80 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~ 80 (868)
.|+.|+.|+..+||. +|.|..|. +.+|++|++.
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~---~~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCG---MNVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTC---CEECHHHHTT
T ss_pred CCCCcCCCCceeeccCCccCEeCCCC---CeECHHHhhh
Confidence 467899999999984 89999997 7999999974
No 12
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=92.97 E-value=0.035 Score=49.73 Aligned_cols=44 Identities=30% Similarity=0.730 Sum_probs=35.9
Q ss_pred Ccccccccc-cccCCeeeeccC-CccccccccCCCceecCCCCCCCceEEEe
Q 045873 539 DAECQLCHK-NIHGTSYGCTPC-MFNIHESCAELPQEVRHPFHPRHSLTVQE 588 (868)
Q Consensus 539 ~~~C~~C~~-~i~~~~Y~C~~C-df~lH~~Ca~lP~~i~H~~h~~HpL~L~~ 588 (868)
...|++|.. +|.|..|+|..| ||+|.+.|..... | +.|++....
T Consensus 31 gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~---H---~~H~f~~i~ 76 (98)
T 2dip_A 31 GIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC---H---LSHTFTFRE 76 (98)
T ss_dssp CCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS---G---GGSCEEECC
T ss_pred CCCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC---C---CCCCeeEec
Confidence 368999996 688999999999 9999999987652 4 567887644
No 13
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=92.50 E-value=0.3 Score=44.47 Aligned_cols=100 Identities=19% Similarity=0.354 Sum_probs=64.6
Q ss_pred cccccccccccCCCceEeCCCCCCCCCccccCCCCCCCCCCCCcccEEEecCCCCccCCcCCCCCCCCcEEEeeccCcee
Q 045873 234 WYRCDACRSYIDLGMRYRCDDCDFDMHPECMSLKPNIKYPAHQHLLIVVEDMSYESQCHGCSLDIEGTFFARCVECKLDF 313 (868)
Q Consensus 234 ~~~C~~C~~~~~~g~~Y~C~~C~f~lh~~Ca~~P~~i~~~~H~H~L~l~~~~~~~~~C~~Cg~~~~~~~~Y~C~~C~f~l 313 (868)
...|..|++.-.....-.|..|.-..|+.|...+....+.. -.+- +. =..|.+|++.++......|..|+-.+
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~----~W~C--~~-C~~C~~C~~~~~~~~ll~Cd~C~~~y 79 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRA----GWQC--PE-CKVCQNCKQSGEDSKMLVCDTCDKGY 79 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTST----TCCC--TT-TCCCTTTCCCSCCTTEEECSSSCCEE
T ss_pred CCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCcccccccc----CccC--Cc-CCcccccCccCCCCCeeECCCCCcHH
Confidence 45699998742211247899999999999988764321110 0000 00 12588888876556688899999999
Q ss_pred ecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCC
Q 045873 314 HVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETN 363 (868)
Q Consensus 314 H~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d 363 (868)
|..|+.-| + + ..| .++|+|..|.....
T Consensus 80 H~~Cl~pp-----l---------~--------~~P-~g~W~C~~C~~c~~ 106 (111)
T 2ysm_A 80 HTFCLQPV-----M---------K--------SVP-TNGWKCKNCRICIS 106 (111)
T ss_dssp EGGGSSSC-----C---------S--------SCC-SSCCCCHHHHCCSC
T ss_pred hHHhcCCc-----c---------c--------cCC-CCCcCCcCCcCcCC
Confidence 99998643 0 0 122 35799999876543
No 14
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=91.95 E-value=0.1 Score=42.95 Aligned_cols=33 Identities=24% Similarity=0.430 Sum_probs=28.6
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAEL 80 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~ 80 (868)
.|+.|+.|+..+||. +|.|..|. +.+|++|++.
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~---~~~Hk~C~~~ 57 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACG---MNVHHRCQTK 57 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSC---CEECTTTTTT
T ss_pred CCcCchhcChhheecCCcccccCCCC---CccCHhHHhh
Confidence 467899999999984 89999997 7999999974
No 15
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.92 E-value=0.23 Score=40.77 Aligned_cols=39 Identities=28% Similarity=0.458 Sum_probs=32.2
Q ss_pred CCCCCCCCCC-CCCCCceeeCcCCCCCcccchhhhcCCcccc
Q 045873 45 HPEKCSACDR-QPSGSFYFCKQCWPKSPFFHKLCAELPRQIR 85 (868)
Q Consensus 45 ~~~~C~~C~~-~~~g~~Y~C~~C~~~~f~~H~~C~~~p~~I~ 85 (868)
++..|++|+. +|.|.-|.|.+|. ||+|+.+|...+.+.+
T Consensus 10 H~~~Cd~C~~~pi~G~RykC~~C~--d~DLC~~C~~~g~~~~ 49 (63)
T 2e5r_A 10 HPVECSYCHSESMMGFRYRCQQCH--NYQLCQDCFWRGHAGG 49 (63)
T ss_dssp SCSCCSSSCCCSSCSCEEEESSCS--SCEECHHHHHHCCCCS
T ss_pred eCCCCcCCCCcceecceEEecCCC--CchhHHHHHhCCCcCC
Confidence 4457999976 4999999999997 6999999998876553
No 16
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=91.45 E-value=0.11 Score=42.76 Aligned_cols=33 Identities=27% Similarity=0.486 Sum_probs=28.5
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAEL 80 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~ 80 (868)
.|..|+.|+..+||. +|.|..|. +.+|++|++.
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~---~~~Hk~C~~~ 54 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCG---MNVHHKCREK 54 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTC---CEECHHHHTT
T ss_pred CCCcccccChhhhccCceeeECCCCC---CeEchhHhhh
Confidence 466899999999984 89999997 7999999985
No 17
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=91.34 E-value=0.12 Score=40.08 Aligned_cols=35 Identities=23% Similarity=0.585 Sum_probs=29.8
Q ss_pred CCCcCccccccccc-CCCcEEecCCCcccccccCCC
Q 045873 414 DDIECHACENLIIQ-GHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 414 ~~~~C~aC~~~~~~-~~~~Y~C~~C~F~lH~~C~~l 448 (868)
.+..|+.|+..++. ....|.|..|++.+|+.|++.
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 46889999999973 247899999999999999874
No 18
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=91.32 E-value=0.11 Score=42.89 Aligned_cols=33 Identities=27% Similarity=0.555 Sum_probs=28.7
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAEL 80 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~ 80 (868)
.|+.|+.|+..+||. +|.|..|. +.+|++|++.
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~---~~~Hk~C~~~ 58 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECG---VKCHEKCQDL 58 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTC---CEECTTHHHH
T ss_pred CCcChhhcChhhcccCcceeEcCCCC---CeeCHHHHhh
Confidence 467899999999984 79999997 7999999974
No 19
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=90.66 E-value=0.17 Score=39.32 Aligned_cols=42 Identities=17% Similarity=0.523 Sum_probs=31.4
Q ss_pred CceEEEecccccccccccceecccCCceEEcCCcCcccccccccCcc
Q 045873 582 HSLTVQENTFQSRYFCDACRFDVKPGLRYRCDECDFDLHLECLSLKA 628 (868)
Q Consensus 582 HpL~L~~~~~~~~~~C~~C~~~~~~g~~Y~C~~C~~~lH~~Ca~~p~ 628 (868)
|.++.... ...+|+.|++.+- +.|+|.+|++..|.+|+...+
T Consensus 5 HrF~~~t~---~~t~C~~C~k~i~--~G~kC~~Ck~~cH~kC~~~vp 46 (49)
T 1kbe_A 5 HRFSTKSW---LSQVCNVCQKSMI--FGVKCKHCRLKCHNKCTKEAP 46 (49)
T ss_dssp CCEEEECC---SSCCCSSSCCSSC--CEEEETTTTEEESSSCTTTSC
T ss_pred cccCccCC---CCcCccccCceeE--CcCCCCCCCCccchhhcCcCC
Confidence 45554432 1368999999883 448999999999999997543
No 20
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=90.53 E-value=0.2 Score=38.96 Aligned_cols=32 Identities=22% Similarity=0.680 Sum_probs=27.5
Q ss_pred CcccccccccccCCeeeeccCCccccccccCCC
Q 045873 539 DAECQLCHKNIHGTSYGCTPCMFNIHESCAELP 571 (868)
Q Consensus 539 ~~~C~~C~~~i~~~~Y~C~~Cdf~lH~~Ca~lP 571 (868)
...|+.|++.|. ..|+|.+|+|..|.+|+...
T Consensus 14 ~t~C~~C~k~i~-~G~kC~~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 14 SQVCNVCQKSMI-FGVKCKHCRLKCHNKCTKEA 45 (49)
T ss_dssp SCCCSSSCCSSC-CEEEETTTTEEESSSCTTTS
T ss_pred CcCccccCceeE-CcCCCCCCCCccchhhcCcC
Confidence 468999999887 34899999999999999853
No 21
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=90.52 E-value=0.25 Score=40.59 Aligned_cols=45 Identities=20% Similarity=0.513 Sum_probs=34.7
Q ss_pred cCccccccccccCCCcCccccccccc-CCCcEEecCCCcccccccCCC
Q 045873 402 HHLLVLLENERNDDIECHACENLIIQ-GHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 402 ~H~L~l~~~~~~~~~~C~aC~~~~~~-~~~~Y~C~~C~F~lH~~C~~l 448 (868)
+|.+.... ...+..|+.|+..++. ....|.|..|.+.+|+.|++.
T Consensus 12 ~H~F~~~~--~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 12 PHRFKVYN--YKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCCEEECC--CCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCccEeEc--CCCCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 46654433 3457899999999982 247799999999999999974
No 22
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.50 E-value=0.17 Score=43.70 Aligned_cols=33 Identities=36% Similarity=0.699 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAEL 80 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~ 80 (868)
.|+.|+.|+..+||. +|.|..|. +.+|++|++.
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~---~~~Hk~C~~~ 62 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCN---AAIHKKCIDK 62 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTC---CEECTTGGGT
T ss_pred CCcChhhcChhhccccccccccCCcC---CeeChhhhhh
Confidence 467899999999984 89999997 7999999985
No 23
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=90.01 E-value=0.19 Score=39.21 Aligned_cols=33 Identities=18% Similarity=0.692 Sum_probs=29.0
Q ss_pred cCCCcCcccccccccCCCcEEecCCCcccccccCCC
Q 045873 413 NDDIECHACENLIIQGHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 413 ~~~~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~l 448 (868)
..+..|+.|+..++ ..|.|..|++..|+.|++.
T Consensus 12 ~~pt~C~~C~~~l~---qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 12 LKLAFCDICQKFLL---NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp SSCEECTTSSSEEC---SEEECTTTTCCBCSTTSSS
T ss_pred CCCcCCCCcccccc---cCCEeCCCCCeEChhHHhh
Confidence 34688999999887 6899999999999999874
No 24
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=89.45 E-value=0.23 Score=40.14 Aligned_cols=44 Identities=18% Similarity=0.502 Sum_probs=32.8
Q ss_pred CCCCccc-cCCccccccccccceecCceeEeeccCCeeeccccccc
Q 045873 457 DSHYLTL-QNSSFSERCTACGQQLKGNAIYHCETCDFDLDLDCAAQ 501 (868)
Q Consensus 457 ~~~~L~~-~~~~~~~~C~~C~~~~~g~~~Y~C~~C~~~lh~~Ca~~ 501 (868)
..|.+.. ........|+.|++.+ +..+|.|..|+|..|.+|+..
T Consensus 9 ~~H~F~~~~~~~~pt~C~~C~~~i-~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 9 EGHRFVELALRGGPGWCDLCGREV-LRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SSCCCEECCCSSCCEECTTTCSEE-CSCCEECTTTSCEECHHHHTT
T ss_pred CCCcCeeeeccCCCeEchhcchhh-hhCccEeCCCCCeEehhhhhh
Confidence 3444444 3222345799999999 445799999999999999977
No 25
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=89.27 E-value=0.32 Score=40.90 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=28.1
Q ss_pred cccCCcccccCCCCCceecCCCCceecccccccc
Q 045873 113 AFDCDYCDESHKDNPFLCCDFCNFQIGAPCATTL 146 (868)
Q Consensus 113 ~~~C~~C~k~~~~~~~y~C~~Cdf~lh~~Ca~~~ 146 (868)
.-+|+.|++.+ ...+|.|++|.|.+|..|+...
T Consensus 35 pt~C~~C~~~l-~~qG~kC~~C~~~cHkkC~~~V 67 (72)
T 2fnf_X 35 PGWCDLCGREV-LRQALRCANCKFTCHSECRSLI 67 (72)
T ss_dssp CCBCTTTSSBC-SSCCEECTTSSCEECTGGGGGC
T ss_pred CcchhhhhHHH-HhCcCccCCCCCeechhhhccC
Confidence 34799999999 4457899999999999999754
No 26
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=89.16 E-value=0.4 Score=39.28 Aligned_cols=33 Identities=27% Similarity=0.746 Sum_probs=28.6
Q ss_pred ccccccccccccC--CCcEeeecCCceeehhhhcC
Q 045873 773 GVVCYACEKLVRG--QPTYGCDQCRFYLHKSCAEL 805 (868)
Q Consensus 773 ~~~C~~C~~~i~~--~~~y~C~~CdFilH~~CA~l 805 (868)
..+|..|...|.+ ..-|+|..|+|..|+.|+..
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 5699999998863 57799999999999999964
No 27
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=88.43 E-value=0.21 Score=38.93 Aligned_cols=32 Identities=22% Similarity=0.544 Sum_probs=27.9
Q ss_pred cccCCcccccCCCCCceecCCCCceecccccccc
Q 045873 113 AFDCDYCDESHKDNPFLCCDFCNFQIGAPCATTL 146 (868)
Q Consensus 113 ~~~C~~C~k~~~~~~~y~C~~Cdf~lh~~Ca~~~ 146 (868)
.-+|+.|++.+. .+|.|++|.|.+|..|+...
T Consensus 14 pt~C~~C~~~l~--qG~~C~~C~~~~H~~C~~~v 45 (52)
T 1faq_A 14 LAFCDICQKFLL--NGFRCQTCGYKFHEHCSTKV 45 (52)
T ss_dssp CEECTTSSSEEC--SEEECTTTTCCBCSTTSSSS
T ss_pred CcCCCCcccccc--cCCEeCCCCCeEChhHHhhC
Confidence 357999999887 56899999999999999754
No 28
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.43 E-value=0.29 Score=41.40 Aligned_cols=42 Identities=26% Similarity=0.438 Sum_probs=32.2
Q ss_pred cccCEEeec-CCcccccccccccC---CeeeeccCCccccccccCC
Q 045873 529 YHYLTVLDV-GDAECQLCHKNIHG---TSYGCTPCMFNIHESCAEL 570 (868)
Q Consensus 529 ~H~L~~l~~-~~~~C~~C~~~i~~---~~Y~C~~Cdf~lH~~Ca~l 570 (868)
.|.+..... ....|+.|...++| ..|+|..|++..|++|+..
T Consensus 17 ~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 17 PHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp BCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 366552222 26789999988774 6899999999999999973
No 29
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=88.13 E-value=0.16 Score=44.10 Aligned_cols=32 Identities=25% Similarity=0.462 Sum_probs=28.5
Q ss_pred CCCCCCCCCCCCCCC-----ceeeCcCCCCCcccchhhhc
Q 045873 45 HPEKCSACDRQPSGS-----FYFCKQCWPKSPFFHKLCAE 79 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~-----~Y~C~~C~~~~f~~H~~C~~ 79 (868)
.|+.|..|+..|||. +|.|..|. +.+|++|.+
T Consensus 34 ~PT~Cd~C~~~lWGl~kqp~G~~C~~C~---~~~HkrC~~ 70 (84)
T 2row_A 34 FPTNCEACMKPLWHMFKPPPALECRRCH---IKCHKDHMD 70 (84)
T ss_dssp SCEECSSSSSEECCSSSCCCEEEESSSC---CEEEHHHHH
T ss_pred CCcchhhcCHhhhccccCCCCCEecCCC---CccchhHhC
Confidence 467899999999986 89999996 799999997
No 30
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=88.11 E-value=0.29 Score=41.16 Aligned_cols=43 Identities=28% Similarity=0.548 Sum_probs=33.6
Q ss_pred cCcccc-ccccccCCCcCcccccccccCCCcEEecCCCcccccccCCC
Q 045873 402 HHLLVL-LENERNDDIECHACENLIIQGHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 402 ~H~L~l-~~~~~~~~~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~l 448 (868)
.|.+.. .. ......|+.|+..+. ...|.|..|+|..|+.|+.+
T Consensus 23 ~H~F~~~~~--~~~pt~C~~C~~~l~--~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 23 GHRFVELAL--RGGPGWCDLCGREVL--RQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SCCCEECCC--CSSCCBCTTTSSBCS--SCCEECTTSSCEECTGGGGG
T ss_pred CCccceeec--CCCCcchhhhhHHHH--hCcCccCCCCCeechhhhcc
Confidence 455443 22 345788999999984 68899999999999999874
No 31
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.09 E-value=0.36 Score=41.68 Aligned_cols=45 Identities=20% Similarity=0.567 Sum_probs=35.0
Q ss_pred cCccccccccccCCCcCccccccccc-CCCcEEecCCCcccccccCCC
Q 045873 402 HHLLVLLENERNDDIECHACENLIIQ-GHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 402 ~H~L~l~~~~~~~~~~C~aC~~~~~~-~~~~Y~C~~C~F~lH~~C~~l 448 (868)
.|.+.... ......|+.|+..++. ....|.|..|.|.+|+.|++.
T Consensus 17 ~H~F~~~~--~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 17 NHEFIATF--FGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp GCCEEEEC--CSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCceEeEe--CCCCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 56655433 3457899999999972 246799999999999999984
No 32
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.08 E-value=0.26 Score=42.78 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAEL 80 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~ 80 (868)
.|+.|+.|+..+||. +|.|..|. +.+|++|++.
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~---~~~Hk~C~~~ 62 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCD---MNVHKQCVIN 62 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSC---CEEETTTTTT
T ss_pred CCcCCcccCccccccccCCCcCCCcC---CccCHhHHhh
Confidence 467899999999984 89999997 7999999985
No 33
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=87.76 E-value=1.8 Score=39.14 Aligned_cols=72 Identities=19% Similarity=0.420 Sum_probs=51.9
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCee------ecccccccccC
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLL------RCEICKEERNP 722 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~------~C~vC~~~~d~ 722 (868)
..|.+|+...+......|..|.-..|..|+. ++... ...+. | .|.||++..+.
T Consensus 8 ~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~--~~~~~------------------~~~~~-W~C~~C~~C~~C~~~~~~ 66 (111)
T 2ysm_A 8 ANCAVCDSPGDLLDQFFCTTCGQHYHGMCLD--IAVTP------------------LKRAG-WQCPECKVCQNCKQSGED 66 (111)
T ss_dssp SCBTTTCCCCCTTTSEECSSSCCEECTTTTT--CCCCT------------------TTSTT-CCCTTTCCCTTTCCCSCC
T ss_pred CCCcCCCCCCCCcCCeECCCCCCCcChHHhC--Ccccc------------------ccccC-ccCCcCCcccccCccCCC
Confidence 5799999665433358899999999999999 65311 01123 4 35677766543
Q ss_pred CCceEeCCCCCceeeccccc
Q 045873 723 NHPSYGCVECECHAHVRCVI 742 (868)
Q Consensus 723 ~~~~Y~C~~C~~~lH~~C~~ 742 (868)
...-.|+.|+...|..|+-
T Consensus 67 -~~ll~Cd~C~~~yH~~Cl~ 85 (111)
T 2ysm_A 67 -SKMLVCDTCDKGYHTFCLQ 85 (111)
T ss_dssp -TTEEECSSSCCEEEGGGSS
T ss_pred -CCeeECCCCCcHHhHHhcC
Confidence 4588999999999999994
No 34
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=87.61 E-value=0.24 Score=45.46 Aligned_cols=96 Identities=23% Similarity=0.543 Sum_probs=62.1
Q ss_pred ccccceecc-------cCCceEEcCCcCcccccccccCcccceecCCcceEEEEecCCCc-----ccccccccCcCCcee
Q 045873 596 FCDACRFDV-------KPGLRYRCDECDFDLHLECLSLKANIRYEDHQHLLILIENMSCK-----SKCEACRCDIEGTFF 663 (868)
Q Consensus 596 ~C~~C~~~~-------~~g~~Y~C~~C~~~lH~~Ca~~p~p~~~~~H~H~L~l~~~~~~~-----~~C~~C~~~~~~~~~ 663 (868)
.|++|.... +.+-.-.|+.|.-..|..|+..+...... + +.... ..|.+|+........
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~--------~-~~~~W~C~~C~~C~~C~~~~~~~~l 73 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEA--------V-KTYKWQCIECKSCILCGTSENDDQL 73 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHH--------H-HHTTCCCGGGCCCTTTTCCTTTTTE
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhc--------c-CCCccCccccCccCcccccCCCCce
Confidence 588885432 12355679999999999998654321100 0 11111 257888866544558
Q ss_pred EEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccccc
Q 045873 664 LRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERN 721 (868)
Q Consensus 664 y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d 721 (868)
+.|..|+-..|..|+. -| |. +.+.|+ |.|..|...+.
T Consensus 74 l~Cd~C~~~yH~~Cl~--pp-----------l~-------~~P~g~-W~C~~C~~~~~ 110 (114)
T 2kwj_A 74 LFCDDCDRGYHMYCLN--PP-----------VA-------EPPEGS-WSCHLCWELLK 110 (114)
T ss_dssp EECSSSCCEEETTTSS--SC-----------CS-------SCCSSC-CCCHHHHHHHH
T ss_pred EEcCCCCccccccccC--CC-----------cc-------CCCCCC-eECccccchhh
Confidence 8999999999999998 33 11 123467 99999976653
No 35
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=87.56 E-value=0.25 Score=40.28 Aligned_cols=34 Identities=26% Similarity=0.599 Sum_probs=29.3
Q ss_pred CCCcCcccccccccCCCcEEecCCCcccccccCC
Q 045873 414 DDIECHACENLIIQGHSAYGCDPCRFYLHKSCFE 447 (868)
Q Consensus 414 ~~~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~ 447 (868)
....|+.|+..|..+...|+|.+|.++.|+.|.+
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSCEECGGGGG
T ss_pred CCcccccccCEEEEeeEeeECCCCCCeEchhHhh
Confidence 3678999999986445789999999999999976
No 36
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=87.40 E-value=0.24 Score=40.02 Aligned_cols=43 Identities=28% Similarity=0.548 Sum_probs=33.6
Q ss_pred cCcccc-ccccccCCCcCcccccccccCCCcEEecCCCcccccccCCC
Q 045873 402 HHLLVL-LENERNDDIECHACENLIIQGHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 402 ~H~L~l-~~~~~~~~~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~l 448 (868)
+|.... .. ......|+.|+..+. ...|.|..|+|..|+.|+++
T Consensus 10 ~H~F~~~~~--~~~pt~C~~C~~~i~--kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 10 GHRFVELAL--RGGPGWCDLCGREVL--RQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp SCCCEECCC--SSCCEECTTTCSEEC--SCCEECTTTSCEECHHHHTT
T ss_pred CCcCeeeec--cCCCeEchhcchhhh--hCccEeCCCCCeEehhhhhh
Confidence 455443 22 345788999999984 68899999999999999874
No 37
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=87.31 E-value=0.44 Score=43.55 Aligned_cols=96 Identities=26% Similarity=0.543 Sum_probs=60.7
Q ss_pred ccccccceec------ccCCceEEcCCcCcccccccccCcccceecCCcceEEEEecCCC-----cccccccccCc-CCc
Q 045873 594 RYFCDACRFD------VKPGLRYRCDECDFDLHLECLSLKANIRYEDHQHLLILIENMSC-----KSKCEACRCDI-EGT 661 (868)
Q Consensus 594 ~~~C~~C~~~------~~~g~~Y~C~~C~~~lH~~Ca~~p~p~~~~~H~H~L~l~~~~~~-----~~~C~~C~~~~-~~~ 661 (868)
...|.+|... .+.+-...|+.|+-..|+.|+....++.-. .+... =.+|.+|+... ...
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~---------~~~~~W~C~~C~~C~vC~~~~~~~~ 75 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVR---------VKALRWQCIECKTCSSCRDQGKNAD 75 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHH---------HHTSCCCCTTTCCBTTTCCCCCTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHH---------hhccccccccCCccccccCcCCCcc
Confidence 3468888653 113466789999999999998653222100 01111 12577777542 223
Q ss_pred eeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 662 FFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 662 ~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
..+.|..|+-..|..|.. -| | . +.+.|+ |.|..|+.+
T Consensus 76 ~ll~Cd~C~~~yH~~Cl~--p~-----------l--~-----~~P~~~-W~C~~C~~k 112 (112)
T 3v43_A 76 NMLFCDSCDRGFHMECCD--PP-----------L--T-----RMPKGM-WICQICRPR 112 (112)
T ss_dssp CCEECTTTCCEECGGGCS--SC-----------C--S-----SCCSSC-CCCTTTSCC
T ss_pred ceEEcCCCCCeeecccCC--CC-----------C--C-----CCCCCC-eECCCCCCc
Confidence 478899999999999997 22 1 0 123466 999999764
No 38
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=86.93 E-value=0.36 Score=41.12 Aligned_cols=45 Identities=20% Similarity=0.502 Sum_probs=34.8
Q ss_pred cCccccccccccCCCcCccccccccc-CCCcEEecCCCcccccccCCC
Q 045873 402 HHLLVLLENERNDDIECHACENLIIQ-GHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 402 ~H~L~l~~~~~~~~~~C~aC~~~~~~-~~~~Y~C~~C~F~lH~~C~~l 448 (868)
.|.+.... ...+..|+.|+..++. ....|.|..|.|.+|+.|++.
T Consensus 23 ~H~F~~~~--f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 23 CHEFTATF--FPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SCEEEEEC--CSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCccEEEc--CCCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 56655433 3457899999999983 246799999999999999874
No 39
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=86.78 E-value=0.46 Score=43.45 Aligned_cols=76 Identities=17% Similarity=0.430 Sum_probs=51.1
Q ss_pred ccccccccCc------CCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCee------ecccc
Q 045873 649 SKCEACRCDI------EGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLL------RCEIC 716 (868)
Q Consensus 649 ~~C~~C~~~~------~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~------~C~vC 716 (868)
.+|..|.... .......|..|+-.+|..|+. +...+... ...++ | .|.||
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~--~~~~~~~~---------------~~~~~-W~C~~C~~C~vC 67 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLK--FSPELTVR---------------VKALR-WQCIECKTCSSC 67 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHT--CCHHHHHH---------------HHTSC-CCCTTTCCBTTT
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhc--CCHHHHHH---------------hhccc-cccccCCccccc
Confidence 4788997542 222478899999999999998 53222100 01123 4 46777
Q ss_pred cccccCCCceEeCCCCCceeeccccc
Q 045873 717 KEERNPNHPSYGCVECECHAHVRCVI 742 (868)
Q Consensus 717 ~~~~d~~~~~Y~C~~C~~~lH~~C~~ 742 (868)
++.-+...-.-.|+.|+.++|..|+.
T Consensus 68 ~~~~~~~~~ll~Cd~C~~~yH~~Cl~ 93 (112)
T 3v43_A 68 RDQGKNADNMLFCDSCDRGFHMECCD 93 (112)
T ss_dssp CCCCCTTCCCEECTTTCCEECGGGCS
T ss_pred cCcCCCccceEEcCCCCCeeecccCC
Confidence 76543344678899999999999984
No 40
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.49 E-value=0.71 Score=40.04 Aligned_cols=45 Identities=24% Similarity=0.541 Sum_probs=34.9
Q ss_pred cCccccccccccCCCcCccccccccc-CCCcEEecCCCcccccccCCC
Q 045873 402 HHLLVLLENERNDDIECHACENLIIQ-GHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 402 ~H~L~l~~~~~~~~~~C~aC~~~~~~-~~~~Y~C~~C~F~lH~~C~~l 448 (868)
.|.+.... ...+..|+.|+..++. ....|.|..|.+.+|+.|+++
T Consensus 17 ~H~F~~~~--~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 17 KHKFKIHT--YGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SCCCEEEC--CSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CcccEeee--CCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 46655443 3457899999999883 147799999999999999984
No 41
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.36 E-value=0.25 Score=41.75 Aligned_cols=45 Identities=18% Similarity=0.414 Sum_probs=34.8
Q ss_pred ccCccccccccccCCCcCccccccccc-CCCcEEecCCCcccccccCC
Q 045873 401 HHHLLVLLENERNDDIECHACENLIIQ-GHSAYGCDPCRFYLHKSCFE 447 (868)
Q Consensus 401 H~H~L~l~~~~~~~~~~C~aC~~~~~~-~~~~Y~C~~C~F~lH~~C~~ 447 (868)
..|.+.... ......|+.|+..++. ....|.|..|.+.+|+.|++
T Consensus 16 ~~H~F~~~~--f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~ 61 (74)
T 2db6_A 16 KPHKFKDHF--FKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQS 61 (74)
T ss_dssp SBCCEEEEE--CSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTG
T ss_pred CCCceEEee--CCCCcCchhcChhhccccCCccccCCCCCccChhHHh
Confidence 356665543 3457889999999882 13679999999999999997
No 42
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=85.98 E-value=0.4 Score=39.49 Aligned_cols=45 Identities=22% Similarity=0.493 Sum_probs=34.2
Q ss_pred cCccccccccccCCCcCcccccccccC-CCcEEecCCCcccccccCCC
Q 045873 402 HHLLVLLENERNDDIECHACENLIIQG-HSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 402 ~H~L~l~~~~~~~~~~C~aC~~~~~~~-~~~Y~C~~C~F~lH~~C~~l 448 (868)
.|.+.... ...+..|+.|+..++.. ...|.|..|.|.+|+.|+++
T Consensus 13 ~H~F~~~~--~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 13 QHNFEVWT--ATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp CCCEEEEE--CSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CcccEeee--CCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 46654433 34578999999999731 36799999999999999863
No 43
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=85.74 E-value=0.33 Score=40.78 Aligned_cols=50 Identities=26% Similarity=0.632 Sum_probs=37.7
Q ss_pred cccccccccCc--CCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccc
Q 045873 648 KSKCEACRCDI--EGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEER 720 (868)
Q Consensus 648 ~~~C~~C~~~~--~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~ 720 (868)
...|.+|+... .....+.|..|+-.+|..|.. +|. | +.|+ |.|..|..+.
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~--~~~-v-------------------P~g~-W~C~~C~~~~ 67 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYG--VPY-I-------------------PEGQ-WLCRHCLQSR 67 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHT--CSS-C-------------------CSSC-CCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCccccccCC--CCc-C-------------------CCCC-cCCccCcCcC
Confidence 45899999653 334578899999999999999 662 0 2256 9999997654
No 44
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=85.68 E-value=0.55 Score=39.92 Aligned_cols=45 Identities=20% Similarity=0.454 Sum_probs=34.1
Q ss_pred CCCCccccCCccccccccccceecCc--eeEeeccCCeeeccccccc
Q 045873 457 DSHYLTLQNSSFSERCTACGQQLKGN--AIYHCETCDFDLDLDCAAQ 501 (868)
Q Consensus 457 ~~~~L~~~~~~~~~~C~~C~~~~~g~--~~Y~C~~C~~~lh~~Ca~~ 501 (868)
..|.|....-...-.|+.|++.+-|. .+|.|..|+|.+|.+|+..
T Consensus 22 ~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 22 KCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 44555443222345899999999764 5799999999999999987
No 45
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=83.60 E-value=2.7 Score=38.06 Aligned_cols=71 Identities=17% Similarity=0.305 Sum_probs=48.7
Q ss_pred cccccccccCcCCceeEEec--CcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccCCCc
Q 045873 648 KSKCEACRCDIEGTFFLRCV--ECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNPNHP 725 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~--~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~~~~ 725 (868)
...|.+|+ . +..++.|. .|....|..|+. |.. .+.|+ |.|.-|.-.+=.+..
T Consensus 15 ~~~C~~C~--~-~G~ll~CD~~~Cp~~fH~~Cl~--L~~--------------------~P~g~-W~Cp~c~C~~C~k~~ 68 (107)
T 4gne_A 15 EDYCFQCG--D-GGELVMCDKKDCPKAYHLLCLN--LTQ--------------------PPYGK-WECPWHQCDECSSAA 68 (107)
T ss_dssp CSSCTTTC--C-CSEEEECCSTTCCCEECTGGGT--CSS--------------------CCSSC-CCCGGGBCTTTCSBC
T ss_pred CCCCCcCC--C-CCcEeEECCCCCCcccccccCc--CCc--------------------CCCCC-EECCCCCCCcCCCCC
Confidence 35799998 2 33378898 899999999998 542 12356 776533322222223
Q ss_pred eEeCCCCCceeeccccccc
Q 045873 726 SYGCVECECHAHVRCVITE 744 (868)
Q Consensus 726 ~Y~C~~C~~~lH~~C~~~~ 744 (868)
.|.|..|..++|..|+-+.
T Consensus 69 ~~~C~~Cp~sfC~~c~~g~ 87 (107)
T 4gne_A 69 VSFCEFCPHSFCKDHEKGA 87 (107)
T ss_dssp CEECSSSSCEECTTTCTTS
T ss_pred CcCcCCCCcchhhhccCCc
Confidence 4999999999999999654
No 46
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=82.81 E-value=0.74 Score=35.69 Aligned_cols=31 Identities=29% Similarity=0.599 Sum_probs=25.5
Q ss_pred cCCcCCCCCCCCcEEEeeccCceeecCCCCC
Q 045873 290 QCHGCSLDIEGTFFARCVECKLDFHVQCGPA 320 (868)
Q Consensus 290 ~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~l 320 (868)
.|.+|++.++.+..-.|..|+-.+|..|+..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p 32 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRP 32 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCT
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCC
Confidence 4899998765556778999999999999863
No 47
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=82.27 E-value=0.65 Score=37.76 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=28.4
Q ss_pred eecccccccccCCCceEeCCCCCceeeccccc
Q 045873 711 LRCEICKEERNPNHPSYGCVECECHAHVRCVI 742 (868)
Q Consensus 711 ~~C~vC~~~~d~~~~~Y~C~~C~~~lH~~C~~ 742 (868)
-.|++|.+.|.....+|.|.+|.+.+|.+|..
T Consensus 20 ~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 20 ESCVPCGKRIKFGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp EECTTTCCEECTTCEEEEESSSSCEECGGGGG
T ss_pred cccccccCEEEEeeEeeECCCCCCeEchhHhh
Confidence 58999999887666899999999999999974
No 48
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=81.53 E-value=0.76 Score=38.70 Aligned_cols=54 Identities=17% Similarity=0.404 Sum_probs=41.2
Q ss_pred cccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccC
Q 045873 648 KSKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNP 722 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~ 722 (868)
...|.+|++...+.....|..|+-.+|..|+. +|... ...++ |.|..|..+++.
T Consensus 18 ~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~--~~~~~------------------~~~~~-w~C~~C~~~~~k 71 (75)
T 2k16_A 18 IWICPGCNKPDDGSPMIGCDDCDDWYHWPCVG--IMAAP------------------PEEMQ-WFCPKCANKIKK 71 (75)
T ss_dssp EECBTTTTBCCSSCCEEECSSSSSEEEHHHHT--CSSCC------------------CSSSC-CCCTTTHHHHCS
T ss_pred CcCCCCCCCCCCCCCEEEcCCCCcccccccCC--CCccC------------------CCCCC-EEChhccCchhh
Confidence 35799999876555578899999999999999 76321 12356 999999888753
No 49
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=81.27 E-value=0.62 Score=39.07 Aligned_cols=34 Identities=24% Similarity=0.526 Sum_probs=27.2
Q ss_pred CccCCcCCCCC--CCCcEEEeeccCceeecCCCCCC
Q 045873 288 ESQCHGCSLDI--EGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~--~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
...|.+|+..+ +......|..|+..+|..|..++
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~ 51 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP 51 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCC
Confidence 55799998764 24557789999999999998765
No 50
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=81.23 E-value=1.4 Score=40.26 Aligned_cols=74 Identities=18% Similarity=0.435 Sum_probs=50.6
Q ss_pred cccccccCc-------CCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCee------ecccc
Q 045873 650 KCEACRCDI-------EGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLL------RCEIC 716 (868)
Q Consensus 650 ~C~~C~~~~-------~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~------~C~vC 716 (868)
.|.+|.... .......|..|.-..|..|+. ++..+.. . ...+. | .|.||
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~--~~~~~~~--------~-------~~~~~-W~C~~C~~C~~C 64 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQ--FTLNMTE--------A-------VKTYK-WQCIECKSCILC 64 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTT--CCHHHHH--------H-------HHHTT-CCCGGGCCCTTT
T ss_pred cCccCCCCccccccCCCCCCCeEeCCCCCccchhhCC--Chhhhhh--------c-------cCCCc-cCccccCccCcc
Confidence 588887532 112478899999999999999 6632210 0 01133 5 46777
Q ss_pred cccccCCCceEeCCCCCceeeccccc
Q 045873 717 KEERNPNHPSYGCVECECHAHVRCVI 742 (868)
Q Consensus 717 ~~~~d~~~~~Y~C~~C~~~lH~~C~~ 742 (868)
.+..+ ..-.-.|+.|+..+|..|+-
T Consensus 65 ~~~~~-~~~ll~Cd~C~~~yH~~Cl~ 89 (114)
T 2kwj_A 65 GTSEN-DDQLLFCDDCDRGYHMYCLN 89 (114)
T ss_dssp TCCTT-TTTEEECSSSCCEEETTTSS
T ss_pred cccCC-CCceEEcCCCCccccccccC
Confidence 77544 34678899999999999994
No 51
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=78.42 E-value=2.3 Score=35.45 Aligned_cols=31 Identities=29% Similarity=0.627 Sum_probs=25.0
Q ss_pred cCCcCCCCCCCCcEEEeeccCceeecCCCCC
Q 045873 290 QCHGCSLDIEGTFFARCVECKLDFHVQCGPA 320 (868)
Q Consensus 290 ~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~l 320 (868)
.|.+||+..+.+..-.|..|+-.+|..|+.-
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~P 50 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 50 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCC
Confidence 4778887654566788999999999999873
No 52
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=77.79 E-value=1.7 Score=35.91 Aligned_cols=51 Identities=25% Similarity=0.608 Sum_probs=36.4
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETNP 364 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d~ 364 (868)
...|.+|+..+ ....|..|+-.+|..|+.-| . + ..| .++|.|..|..+...
T Consensus 12 ~~~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~----l----------~--------~~P-~g~W~C~~C~~~~~p 62 (66)
T 2lri_C 12 GARCGVCGDGT---DVLRCTHCAAAFHWRCHFPA----G----------T--------SRP-GTGLRCRSCSGDVTP 62 (66)
T ss_dssp TCCCTTTSCCT---TCEECSSSCCEECHHHHCTT----T----------C--------CCC-SSSCCCTTTTTCCCC
T ss_pred CCCcCCCCCCC---eEEECCCCCCceecccCCCc----c----------C--------cCC-CCCEECccccCCCcc
Confidence 34699998654 36779999999999998643 0 0 122 467999999776543
No 53
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=77.62 E-value=1.3 Score=34.23 Aligned_cols=49 Identities=31% Similarity=0.690 Sum_probs=35.8
Q ss_pred cccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 650 KCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 650 ~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
.|.+|++.........|..|+-..|..|+. .| |. . .+.|+ |.|..|.+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~--p~-----------l~---~----~P~g~-W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLR--PA-----------LY---E----VPDGE-WQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHC--TT-----------CC---S----CCSSC-CSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCC--CC-----------cC---C----CCCCc-EECcCcccc
Confidence 589999765545588899999999999997 33 10 1 13366 999999753
No 54
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=75.20 E-value=3.6 Score=36.52 Aligned_cols=32 Identities=19% Similarity=0.598 Sum_probs=26.7
Q ss_pred ccCCcCCCCCCCCcEEEeeccCceeecCCCCCC
Q 045873 289 SQCHGCSLDIEGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 289 ~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
..| +||...+.+....|..|+-.+|..|+.++
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~ 60 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGID 60 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCC
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCC
Confidence 357 79887656778889999999999998765
No 55
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=74.60 E-value=4.2 Score=36.80 Aligned_cols=71 Identities=15% Similarity=0.280 Sum_probs=46.8
Q ss_pred CccCCcCCCCCCCCcEEEee--ccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCV--ECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETNPS 365 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~--~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d~~ 365 (868)
...|.+|+.. +....|. .|+..+|..|+.|.. .| .++|.|..|.=.+=.+
T Consensus 15 ~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~L~~------------------------~P-~g~W~Cp~c~C~~C~k 66 (107)
T 4gne_A 15 EDYCFQCGDG---GELVMCDKKDCPKAYHLLCLNLTQ------------------------PP-YGKWECPWHQCDECSS 66 (107)
T ss_dssp CSSCTTTCCC---SEEEECCSTTCCCEECTGGGTCSS------------------------CC-SSCCCCGGGBCTTTCS
T ss_pred CCCCCcCCCC---CcEeEECCCCCCcccccccCcCCc------------------------CC-CCCEECCCCCCCcCCC
Confidence 4579999943 4577788 799999999987542 11 3456665443222222
Q ss_pred CCcccCCCCCcceeeeccccee
Q 045873 366 HPCYGCSECDQYYAHVRCVITE 387 (868)
Q Consensus 366 ~~~Y~C~~C~~~~~H~~C~~~~ 387 (868)
...|.|..|+..+ |..|+.+.
T Consensus 67 ~~~~~C~~Cp~sf-C~~c~~g~ 87 (107)
T 4gne_A 67 AAVSFCEFCPHSF-CKDHEKGA 87 (107)
T ss_dssp BCCEECSSSSCEE-CTTTCTTS
T ss_pred CCCcCcCCCCcch-hhhccCCc
Confidence 2348999999888 67776543
No 56
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.83 E-value=4.7 Score=34.21 Aligned_cols=32 Identities=28% Similarity=0.682 Sum_probs=25.4
Q ss_pred cCCcCCCCCCCCcEEEeeccCceeecCCCCCC
Q 045873 290 QCHGCSLDIEGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 290 ~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
.|.+|++..+.+..-.|..|+-.+|..|+.-|
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPP 59 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCC
Confidence 58888876445567789999999999998743
No 57
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=73.60 E-value=1.3 Score=38.35 Aligned_cols=35 Identities=23% Similarity=0.500 Sum_probs=29.8
Q ss_pred cCCCcCcccccccccC-CC--cEEecCCCcccccccCC
Q 045873 413 NDDIECHACENLIIQG-HS--AYGCDPCRFYLHKSCFE 447 (868)
Q Consensus 413 ~~~~~C~aC~~~~~~~-~~--~Y~C~~C~F~lH~~C~~ 447 (868)
..+..|+.|+..++.. .. .|.|..|.|.+|+.|..
T Consensus 33 ~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 33 HFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp SSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred CCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 4578899999999943 23 89999999999999987
No 58
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=73.17 E-value=2.9 Score=34.46 Aligned_cols=50 Identities=30% Similarity=0.698 Sum_probs=36.8
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccC
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNP 722 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~ 722 (868)
..|.+|+.. +. .+.|..|+-.+|..|.. .|- . +...|+ |.|..|..+..+
T Consensus 13 ~~C~vC~~~--~~-ll~Cd~C~~~~H~~Cl~--P~l-----------~-------~~P~g~-W~C~~C~~~~~p 62 (66)
T 2lri_C 13 ARCGVCGDG--TD-VLRCTHCAAAFHWRCHF--PAG-----------T-------SRPGTG-LRCRSCSGDVTP 62 (66)
T ss_dssp CCCTTTSCC--TT-CEECSSSCCEECHHHHC--TTT-----------C-------CCCSSS-CCCTTTTTCCCC
T ss_pred CCcCCCCCC--Ce-EEECCCCCCceecccCC--Ccc-----------C-------cCCCCC-EECccccCCCcc
Confidence 469999833 33 78899999999999997 331 0 123467 999999877654
No 59
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=72.47 E-value=3.5 Score=34.27 Aligned_cols=30 Identities=30% Similarity=0.685 Sum_probs=24.3
Q ss_pred cccccccCcCCceeEEecCcceeeecccCC
Q 045873 650 KCEACRCDIEGTFFLRCVECKLNFHVQCGP 679 (868)
Q Consensus 650 ~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~ 679 (868)
.|.+|++...+...+.|..|+-..|..|+.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~ 49 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLD 49 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSS
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCC
Confidence 466778665555588999999999999998
No 60
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=69.01 E-value=5.3 Score=33.94 Aligned_cols=32 Identities=31% Similarity=0.687 Sum_probs=25.4
Q ss_pred cCCcCCCCCCCCcEEEeeccCceeecCCCCCC
Q 045873 290 QCHGCSLDIEGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 290 ~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
.|.+|++..+.+....|..|+-.+|..|+.-|
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~Pp 59 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 59 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSC
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCc
Confidence 48888877655667889999999999998743
No 61
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.21 E-value=5.5 Score=33.76 Aligned_cols=30 Identities=30% Similarity=0.743 Sum_probs=25.0
Q ss_pred cccccccCcCCceeEEecCcceeeecccCC
Q 045873 650 KCEACRCDIEGTFFLRCVECKLNFHVQCGP 679 (868)
Q Consensus 650 ~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~ 679 (868)
.|.+|++...+...+.|..|+-..|..|+.
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~ 57 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLN 57 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSS
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccC
Confidence 578888765555588899999999999998
No 62
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=68.10 E-value=4.3 Score=32.75 Aligned_cols=48 Identities=27% Similarity=0.669 Sum_probs=35.9
Q ss_pred cccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
...|.+|+.. + ....|..|+-..|..|+. +|-. +.+.|+ |.|..|.++
T Consensus 11 ~~~C~vC~~~--g-~ll~CD~C~~~fH~~Cl~--p~l~------------------~~p~g~-W~C~~C~~~ 58 (61)
T 2l5u_A 11 QDYCEVCQQG--G-EIILCDTCPRAYHMVCLD--PDME------------------KAPEGK-WSCPHCEKE 58 (61)
T ss_dssp CSSCTTTSCC--S-SEEECSSSSCEEEHHHHC--TTCC------------------SCCCSS-CCCTTGGGG
T ss_pred CCCCccCCCC--C-cEEECCCCChhhhhhccC--CCCC------------------CCCCCc-eECcccccc
Confidence 3579999943 3 488899999999999999 6511 113467 999999764
No 63
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=67.34 E-value=6.1 Score=35.04 Aligned_cols=48 Identities=19% Similarity=0.600 Sum_probs=35.4
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
..| +|+.......+..|..|+-..|..|+. +|.. ....+ |.|..|+.+
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~--~~~~-------------------~~p~~-w~C~~C~~~ 76 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMG--IDRQ-------------------HIPDT-YLCERCQPR 76 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTT--CCTT-------------------SCCSS-BCCTTTSSS
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCC--CCcc-------------------CCCCC-EECCCCcCC
Confidence 467 788766555588899999999999999 6521 11235 999999743
No 64
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=66.42 E-value=6.4 Score=32.89 Aligned_cols=52 Identities=29% Similarity=0.633 Sum_probs=40.4
Q ss_pred ccccccccccccCCCcEeeecCCceeehhhhcCCccccccccccceEEeecCCCCCcceeecccccccc
Q 045873 773 GVVCYACEKLVRGQPTYGCDQCRFYLHKSCAELPRQIQHALHRHSLILKSHTDEGTKEDHECGACLKKL 841 (868)
Q Consensus 773 ~~~C~~C~~~i~~~~~y~C~~CdFilH~~CA~lPr~k~h~~h~h~ltL~~~~~~~~~~~~~C~~C~~~~ 841 (868)
..+|.+|..+-.+.....|..|+--.|..|+++|.... + .+.|.|..|....
T Consensus 18 ~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~---------------~--~~~w~C~~C~~~~ 69 (75)
T 2k16_A 18 IWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPP---------------E--EMQWFCPKCANKI 69 (75)
T ss_dssp EECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCC---------------S--SSCCCCTTTHHHH
T ss_pred CcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCC---------------C--CCCEEChhccCch
Confidence 67899999986666778999999999999999986321 1 2467899997544
No 65
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=66.37 E-value=4.9 Score=32.46 Aligned_cols=54 Identities=19% Similarity=0.544 Sum_probs=39.1
Q ss_pred CCCcCcccccccccCCCcEEecCCCcccccccCCCCCceecccCCCCccccCCccccccccccce
Q 045873 414 DDIECHACENLIIQGHSAYGCDPCRFYLHKSCFELPKVMKHISDSHYLTLQNSSFSERCTACGQQ 478 (868)
Q Consensus 414 ~~~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~lPr~i~h~~~~~~L~~~~~~~~~~C~~C~~~ 478 (868)
...+|..|+.+...+...-.|..|+-.+|-.|++++..... .+ ..|.|..|..+
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~-------~~----~~~~C~~C~~k 58 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAE-------HI----KQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGG-------GC----SSCCCHHHHTT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhc-------CC----CcEECCCCcCc
Confidence 46789999888642345678999999999999998764210 01 26788888754
No 66
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=65.95 E-value=3.4 Score=33.37 Aligned_cols=48 Identities=19% Similarity=0.450 Sum_probs=35.3
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCcccccccccc
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEE 361 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~ 361 (868)
...|.+|+..+ ..-.|..|+-.+|..|+..|- . .. ..++|.|..|.++
T Consensus 11 ~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~p~l---~-------------------~~-p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 11 QDYCEVCQQGG---EIILCDTCPRAYHMVCLDPDM---E-------------------KA-PEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCTTTSCCS---SEEECSSSSCEEEHHHHCTTC---C-------------------SC-CCSSCCCTTGGGG
T ss_pred CCCCccCCCCC---cEEECCCCChhhhhhccCCCC---C-------------------CC-CCCceECcccccc
Confidence 45799998743 467799999999999987651 0 11 2468999999764
No 67
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=62.98 E-value=2.8 Score=36.55 Aligned_cols=51 Identities=25% Similarity=0.618 Sum_probs=38.0
Q ss_pred cccccccccCc--CCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccccc
Q 045873 648 KSKCEACRCDI--EGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERN 721 (868)
Q Consensus 648 ~~~C~~C~~~~--~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d 721 (868)
...|.+|+... .....+.|..|+-.+|..|.. +|. | +.|+ |.|..|.....
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~--p~~-v-------------------P~g~-W~C~~C~~~~~ 77 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYG--VPY-I-------------------PEGQ-WLCRHCLQSRA 77 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHT--CSS-C-------------------CSSC-CCCHHHHHHTT
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCCchhhcccCC--CCc-c-------------------CCCc-eECccccCccc
Confidence 35899999653 223578899999999999999 662 0 1256 99999987654
No 68
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.10 E-value=7.8 Score=30.52 Aligned_cols=29 Identities=31% Similarity=0.785 Sum_probs=24.3
Q ss_pred cccccccccCcCCceeEEecCcceeeecccCC
Q 045873 648 KSKCEACRCDIEGTFFLRCVECKLNFHVQCGP 679 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~ 679 (868)
...|.+|+.. + ....|..|+-..|..|+.
T Consensus 9 ~~~C~vC~~~--g-~ll~Cd~C~~~~H~~Cl~ 37 (56)
T 2yql_A 9 EDFCSVCRKS--G-QLLMCDTCSRVYHLDCLD 37 (56)
T ss_dssp CCSCSSSCCS--S-CCEECSSSSCEECSSSSS
T ss_pred CCCCccCCCC--C-eEEEcCCCCcceECccCC
Confidence 3579999953 3 378899999999999998
No 69
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.03 E-value=4.8 Score=35.32 Aligned_cols=51 Identities=22% Similarity=0.396 Sum_probs=37.0
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCcccccccccc
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEE 361 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~ 361 (868)
...|.+|+...+....-.|..|+-.+|..|+..|- . .+| .++|.|..|..+
T Consensus 16 ~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl---~-------------------~~P-~g~W~C~~C~~~ 66 (92)
T 2e6r_A 16 SYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPL---P-------------------EIP-RGIWRCPKCILA 66 (92)
T ss_dssp CCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCC---S-------------------SCC-SSCCCCHHHHHH
T ss_pred CCCCccCCCcCCCCCEEEcCCCCchhccccCCCCc---c-------------------cCC-CCCcCCccCcCc
Confidence 34699999876445577899999999999987440 0 222 368999999754
No 70
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=60.70 E-value=8.4 Score=31.78 Aligned_cols=33 Identities=24% Similarity=0.524 Sum_probs=27.6
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
...| +|++..++...-.|..|+-.+|..|+.+.
T Consensus 19 ~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~ 51 (68)
T 3o70_A 19 LVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIR 51 (68)
T ss_dssp CCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCC
T ss_pred ceEe-ECCCcCCCCCEEECCCCCccccccccCcC
Confidence 4568 99987655678899999999999999875
No 71
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=60.47 E-value=6.5 Score=31.66 Aligned_cols=49 Identities=18% Similarity=0.422 Sum_probs=34.9
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEET 362 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~ 362 (868)
...|.+|+..+ ....|..|+-.+|..|+..|- . ..+ .++|.|..|..+.
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl-----------------~-----~~p-~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 9 MEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPL-----------------P-----EIP-NGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCTTTCCCS---SCBCCSSSCCCBCSSSSSSCC-----------------S-----SCC-SSCCCCTTTTTTC
T ss_pred CCcCCCCCCCC---CEEEcCCCCHHHcccccCCCc-----------------C-----cCC-CCccCChhhcCch
Confidence 45699998653 345699999999999987430 0 122 4689999997664
No 72
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=60.09 E-value=12 Score=31.19 Aligned_cols=51 Identities=27% Similarity=0.664 Sum_probs=36.3
Q ss_pred cccccccccCcCCceeEEecC--cce-eeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccCC
Q 045873 648 KSKCEACRCDIEGTFFLRCVE--CKL-NFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNPN 723 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~--C~f-~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~~ 723 (868)
...| +|++...+. +..|.. |.. ..|..|+. |... ..++ |.|..|.++...+
T Consensus 16 ~~~C-~C~~~~~g~-MI~CD~~~C~~~wfH~~Cvg--l~~~--------------------p~g~-w~Cp~C~~~~~k~ 69 (71)
T 1wen_A 16 PTYC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVG--LTTK--------------------PRGK-WFCPRCSQESGPS 69 (71)
T ss_dssp CCCS-TTCCCSCSS-EECCSCSSCSCCCEETTTTT--CSSC--------------------CSSC-CCCTTTSSCSSSC
T ss_pred CCEE-ECCCCCCCC-EeEeeCCCCCCccEecccCC--cCcC--------------------CCCC-EECCCCCcccccc
Confidence 3578 799764443 677888 664 89999999 6631 2256 9999998876543
No 73
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=59.60 E-value=13 Score=32.29 Aligned_cols=49 Identities=20% Similarity=0.514 Sum_probs=35.2
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEET 362 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~ 362 (868)
...|.+|++.+ ....|..|+-.+|..|..-| | + ..| .++|.|..|....
T Consensus 25 ~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~Pp-L-------------~--------~~P-~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 25 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPA-L-------------Q--------DVP-GEEWSCSLCHVLP 73 (88)
T ss_dssp SSCCSSSCSSS---CCEECTTSSCEECTTSSSTT-C-------------C--------CCC-SSSCCCCSCCCCC
T ss_pred CCcCcCcCCCC---CEEECCCCCCceecccCCCC-C-------------C--------CCc-CCCcCCccccCCC
Confidence 45799999765 35679999999999998533 0 0 122 4689999997554
No 74
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.74 E-value=8.1 Score=30.42 Aligned_cols=31 Identities=26% Similarity=0.584 Sum_probs=24.6
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
...|.+|+..+ ..-.|..|+-.+|..|+.-|
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~pp 39 (56)
T 2yql_A 9 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPP 39 (56)
T ss_dssp CCSCSSSCCSS---CCEECSSSSCEECSSSSSSC
T ss_pred CCCCccCCCCC---eEEEcCCCCcceECccCCCC
Confidence 45799999754 35679999999999998743
No 75
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=58.56 E-value=4.1 Score=35.22 Aligned_cols=44 Identities=20% Similarity=0.411 Sum_probs=33.0
Q ss_pred CCCccccCCccccccccccceecCc---eeEeeccCCeeeccccccc
Q 045873 458 SHYLTLQNSSFSERCTACGQQLKGN---AIYHCETCDFDLDLDCAAQ 501 (868)
Q Consensus 458 ~~~L~~~~~~~~~~C~~C~~~~~g~---~~Y~C~~C~~~lh~~Ca~~ 501 (868)
.|.+..++-....+|.+|++.+... ..|+|..|...+|.+|...
T Consensus 27 ~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~ 73 (84)
T 1r79_A 27 PHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKES 73 (84)
T ss_dssp CCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHH
T ss_pred eeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHh
Confidence 4444444333346899999987653 4699999999999999977
No 76
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=58.25 E-value=7.6 Score=31.71 Aligned_cols=49 Identities=29% Similarity=0.683 Sum_probs=35.6
Q ss_pred cccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEER 720 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~ 720 (868)
...|.+|+.. + ..+.|..|+-..|..|+. .|- . . .+.|+ |.|..|..+.
T Consensus 8 ~~~C~vC~~~--g-~ll~CD~C~~~fH~~Cl~--ppl-----------~---~----~P~g~-W~C~~C~~~~ 56 (66)
T 1xwh_A 8 EDECAVCRDG--G-ELICCDGCPRAFHLACLS--PPL-----------R---E----IPSGT-WRCSSCLQAT 56 (66)
T ss_dssp CCSBSSSSCC--S-SCEECSSCCCEECTTTSS--SCC-----------S---S----CCSSC-CCCHHHHHTC
T ss_pred CCCCccCCCC--C-CEEEcCCCChhhcccccC--CCc-----------C---c----CCCCC-eECccccCcc
Confidence 3579999943 3 378899999999999998 441 1 1 13367 9999997654
No 77
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=57.34 E-value=6.8 Score=31.51 Aligned_cols=49 Identities=24% Similarity=0.594 Sum_probs=35.5
Q ss_pred cccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEER 720 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~ 720 (868)
...|.+|+.. + ..+.|..|+-..|..|+. .|- + . .+.|+ |.|..|..+.
T Consensus 9 ~~~C~vC~~~--g-~ll~Cd~C~~~fH~~Cl~--ppl-------------~-~----~p~g~-W~C~~C~~~~ 57 (61)
T 1mm2_A 9 MEFCRVCKDG--G-ELLCCDTCPSSYHIHCLN--PPL-------------P-E----IPNGE-WLCPRCTCPA 57 (61)
T ss_dssp CSSCTTTCCC--S-SCBCCSSSCCCBCSSSSS--SCC-------------S-S----CCSSC-CCCTTTTTTC
T ss_pred CCcCCCCCCC--C-CEEEcCCCCHHHcccccC--CCc-------------C-c----CCCCc-cCChhhcCch
Confidence 3579999842 3 378899999999999998 441 0 1 13467 9999997654
No 78
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.18 E-value=5.2 Score=35.10 Aligned_cols=50 Identities=28% Similarity=0.504 Sum_probs=37.3
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
..|.+|+.......+..|..|+-..|..|+. .|- . +.+.|+ |.|..|...
T Consensus 17 ~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~--Ppl-----------~-------~~P~g~-W~C~~C~~~ 66 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCDGCDDNYHIFCLL--PPL-----------P-------EIPRGI-WRCPKCILA 66 (92)
T ss_dssp CCCSSSCCSGGGGGCEECTTTCCEECSSSSS--SCC-----------S-------SCCSSC-CCCHHHHHH
T ss_pred CCCccCCCcCCCCCEEEcCCCCchhccccCC--CCc-----------c-------cCCCCC-cCCccCcCc
Confidence 4799999665444588899999999999998 441 0 113467 999999764
No 79
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=56.32 E-value=7.5 Score=31.75 Aligned_cols=49 Identities=24% Similarity=0.524 Sum_probs=35.2
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEET 362 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~ 362 (868)
...|.+|+..+ ....|..|+-.+|..|+..|- . ..| .++|.|..|..+-
T Consensus 8 ~~~C~vC~~~g---~ll~CD~C~~~fH~~Cl~ppl---~-------------------~~P-~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 8 EDECAVCRDGG---ELICCDGCPRAFHLACLSPPL---R-------------------EIP-SGTWRCSSCLQAT 56 (66)
T ss_dssp CCSBSSSSCCS---SCEECSSCCCEECTTTSSSCC---S-------------------SCC-SSCCCCHHHHHTC
T ss_pred CCCCccCCCCC---CEEEcCCCChhhcccccCCCc---C-------------------cCC-CCCeECccccCcc
Confidence 45799999754 356799999999999987430 0 122 3689999997554
No 80
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=56.10 E-value=8.5 Score=31.20 Aligned_cols=34 Identities=18% Similarity=0.463 Sum_probs=26.7
Q ss_pred CccCCcCCCCC--CCCcEEEeeccCceeecCCCCCC
Q 045873 288 ESQCHGCSLDI--EGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~--~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
...|.+|+... ..+....|..|+-.+|..|...|
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~ 41 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPH 41 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCc
Confidence 45799998752 24667889999999999998754
No 81
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=54.69 E-value=3.6 Score=35.80 Aligned_cols=51 Identities=20% Similarity=0.465 Sum_probs=37.1
Q ss_pred CccCCcCCCCC--CCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCC
Q 045873 288 ESQCHGCSLDI--EGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETN 363 (868)
Q Consensus 288 ~~~C~~Cg~~~--~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d 363 (868)
...|.+|+..+ +....-.|..|+..+|..|..++. +| .++|.|..|.....
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~------------------------vP-~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY------------------------IP-EGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS------------------------CC-SSCCCCHHHHHHTT
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc------------------------cC-CCceECccccCccc
Confidence 45799999764 234577899999999999987651 11 35799999976553
No 82
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=52.98 E-value=18 Score=30.04 Aligned_cols=50 Identities=22% Similarity=0.535 Sum_probs=35.1
Q ss_pred CccCCcCCCCCCCCcEEEeec--cCc-eeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVE--CKL-DFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETNP 364 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~--C~f-~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d~ 364 (868)
...| +|++.. .+..-.|.. |.. .+|..|+.|.. .+ .++|.|..|..+...
T Consensus 16 ~~~C-~C~~~~-~g~MI~CD~~~C~~~wfH~~Cvgl~~------------------------~p-~g~w~Cp~C~~~~~k 68 (71)
T 1wen_A 16 PTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVGLTT------------------------KP-RGKWFCPRCSQESGP 68 (71)
T ss_dssp CCCS-TTCCCS-CSSEECCSCSSCSCCCEETTTTTCSS------------------------CC-SSCCCCTTTSSCSSS
T ss_pred CCEE-ECCCCC-CCCEeEeeCCCCCCccEecccCCcCc------------------------CC-CCCEECCCCCccccc
Confidence 3468 799865 456777888 664 89999988752 11 257889999776543
No 83
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=52.79 E-value=6.5 Score=45.99 Aligned_cols=34 Identities=29% Similarity=0.581 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcCC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAELP 81 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~p 81 (868)
.++.|..|+..+||. ||.|..|. +.+|++|+...
T Consensus 528 ~~t~C~~C~~~l~gl~~qg~~C~~C~---~~vHk~C~~~v 564 (587)
T 3ky9_A 528 ETTSCKACQMLLRGTFYQGYRCHRCR---ASAHKECLGRV 564 (587)
T ss_dssp SCCBCTTTCSBCCSSSCCEEEETTTC---CEECSGGGGGS
T ss_pred CCcccccccccccccccCCcCCCCCC---CccchhhhhcC
Confidence 467899999988886 79999997 79999999853
No 84
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=52.05 E-value=14 Score=31.28 Aligned_cols=30 Identities=30% Similarity=0.685 Sum_probs=24.2
Q ss_pred cccccccCcCCceeEEecCcceeeecccCC
Q 045873 650 KCEACRCDIEGTFFLRCVECKLNFHVQCGP 679 (868)
Q Consensus 650 ~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~ 679 (868)
.|.+|++.......+.|..|+-..|..|..
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~ 57 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLD 57 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSS
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCC
Confidence 477777665545588899999999999998
No 85
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=52.00 E-value=8.1 Score=30.94 Aligned_cols=47 Identities=28% Similarity=0.627 Sum_probs=33.6
Q ss_pred cccccccccCcCCceeEEecC--cce-eeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVE--CKL-NFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~--C~f-~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
...| +|++...+ ....|.. |.. ..|..|+. |+.. ..|+ |.|..|.++
T Consensus 9 ~~yC-~C~~~~~g-~mi~CD~~~C~~~wfH~~Cvg--l~~~--------------------p~~~-w~Cp~C~~~ 58 (59)
T 3c6w_A 9 PTYC-LCHQVSYG-EMIGCDNPDCPIEWFHFACVD--LTTK--------------------PKGK-WFCPRCVQE 58 (59)
T ss_dssp CEET-TTTEECCS-EEEECSCTTCSSCEEETGGGT--CSSC--------------------CSSC-CCCHHHHCC
T ss_pred CcEE-ECCCCCCC-CeeEeeCCCCCCCCEecccCC--cccC--------------------CCCC-EECcCccCc
Confidence 3568 89976444 3777988 664 89999999 6631 2256 999999764
No 86
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=51.98 E-value=15 Score=30.40 Aligned_cols=32 Identities=19% Similarity=0.447 Sum_probs=25.4
Q ss_pred ccCCcCCCCCCC-CcEEEeeccCceeecCCCCCC
Q 045873 289 SQCHGCSLDIEG-TFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 289 ~~C~~Cg~~~~~-~~~Y~C~~C~f~lH~~C~~lp 321 (868)
..| +|+...+. ...-.|..|+-.+|..|+.+.
T Consensus 17 ~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~ 49 (72)
T 1wee_A 17 VDC-KCGTKDDDGERMLACDGCGVWHHTRCIGIN 49 (72)
T ss_dssp ECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCC
T ss_pred eEe-eCCCccCCCCcEEECCCCCCccCCeeeccC
Confidence 468 69987533 367889999999999999876
No 87
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=51.46 E-value=12 Score=30.03 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=27.7
Q ss_pred eecccccccccCCCceEeCCCCCceeeccccc
Q 045873 711 LRCEICKEERNPNHPSYGCVECECHAHVRCVI 742 (868)
Q Consensus 711 ~~C~vC~~~~d~~~~~Y~C~~C~~~lH~~C~~ 742 (868)
..|++|++..+.....-.|+.|..=+|.+|+-
T Consensus 7 ~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvg 38 (64)
T 1we9_A 7 GQCGACGESYAADEFWICCDLCEMWFHGKCVK 38 (64)
T ss_dssp CCCSSSCCCCCSSSCEEECSSSCCEEETTTTT
T ss_pred CCCCCCCCccCCCCCEEEccCCCCCCCccccC
Confidence 68999999877666677899999999999993
No 88
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=51.06 E-value=8.2 Score=30.81 Aligned_cols=49 Identities=27% Similarity=0.590 Sum_probs=35.7
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccccc
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERN 721 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d 721 (868)
..|.+|+.. + ....|..|+-..|..|.. .|- . . .+.|+ |.|..|..+..
T Consensus 6 ~~C~vC~~~--g-~ll~Cd~C~~~fH~~Cl~--ppl-----------~---~----~p~g~-W~C~~C~~~~~ 54 (60)
T 2puy_A 6 DFCSVCRKS--G-QLLMCDTCSRVYHLDCLD--PPL-----------K---T----IPKGM-WICPRCQDQML 54 (60)
T ss_dssp SSCTTTCCC--S-SCEECSSSSCEECGGGSS--SCC-----------S---S----CCCSC-CCCHHHHHHHH
T ss_pred CCCcCCCCC--C-cEEEcCCCCcCEECCcCC--CCc-----------C---C----CCCCc-eEChhccChhh
Confidence 479999953 3 378899999999999998 431 1 1 13366 99999976653
No 89
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=50.88 E-value=8.5 Score=30.73 Aligned_cols=49 Identities=20% Similarity=0.495 Sum_probs=34.7
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEET 362 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~ 362 (868)
...|.+|+..+ ..-.|..|+-.+|..|+..|- . ..| .++|.|..|..+.
T Consensus 5 ~~~C~vC~~~g---~ll~Cd~C~~~fH~~Cl~ppl---~-------------------~~p-~g~W~C~~C~~~~ 53 (60)
T 2puy_A 5 EDFCSVCRKSG---QLLMCDTCSRVYHLDCLDPPL---K-------------------TIP-KGMWICPRCQDQM 53 (60)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECGGGSSSCC---S-------------------SCC-CSCCCCHHHHHHH
T ss_pred CCCCcCCCCCC---cEEEcCCCCcCEECCcCCCCc---C-------------------CCC-CCceEChhccChh
Confidence 34699999754 356799999999999987430 0 122 3689999996554
No 90
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=50.02 E-value=23 Score=30.84 Aligned_cols=49 Identities=22% Similarity=0.629 Sum_probs=35.5
Q ss_pred cccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEER 720 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~ 720 (868)
...|.+|+.. + ..+.|..|+-..|..|.. -| |. . .+.|+ |.|..|....
T Consensus 25 ~~~C~vC~~~--g-~LL~CD~C~~~fH~~Cl~--Pp-----------L~--~-----~P~g~-W~C~~C~~~~ 73 (88)
T 1fp0_A 25 ATICRVCQKP--G-DLVMCNQCEFCFHLDCHL--PA-----------LQ--D-----VPGEE-WSCSLCHVLP 73 (88)
T ss_dssp SSCCSSSCSS--S-CCEECTTSSCEECTTSSS--TT-----------CC--C-----CCSSS-CCCCSCCCCC
T ss_pred CCcCcCcCCC--C-CEEECCCCCCceecccCC--CC-----------CC--C-----CcCCC-cCCccccCCC
Confidence 4589999943 3 378899999999999997 22 10 1 13467 9999998653
No 91
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=49.83 E-value=9 Score=33.07 Aligned_cols=45 Identities=24% Similarity=0.493 Sum_probs=32.6
Q ss_pred CcCCCcccccccccCCCccccCcCCCCC--CCCcEEeccCCCccccccCC
Q 045873 162 HRHPLILLEMELEAEDTKCKFCCKSIHG--SQSYYCCGPCNFYIHKSCSE 209 (868)
Q Consensus 162 H~H~L~~~~~~~~~~~~~C~~C~~~~~~--~~~~Y~C~~Cd~~~H~~C~~ 209 (868)
..|.+...+.+. ...|..|++.+.. .-.+|+|..|...+|..|..
T Consensus 26 ~~H~WveGNl~~---~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~ 72 (84)
T 1r79_A 26 MPHQWLEGNLPV---SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKE 72 (84)
T ss_dssp BCCCEEESCCCT---TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHH
T ss_pred ceeeEEccCCCC---CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHH
Confidence 467776655432 2489999887532 12479999999999999985
No 92
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=49.77 E-value=8.5 Score=42.61 Aligned_cols=33 Identities=30% Similarity=0.579 Sum_probs=28.1
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAEL 80 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~ 80 (868)
.++.|..|+..++|. +|+|..|+ +.+|++|+..
T Consensus 356 ~~t~C~~C~~~~~g~~~qg~~C~~C~---~~~h~~C~~~ 391 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTFYQGYRCYRCR---APAHKECLGR 391 (406)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTC---CEECGGGGGG
T ss_pred CCCCCccccchhceeCCCCCCCCCCc---Cccchhhhhh
Confidence 456899999888875 89999997 7999999974
No 93
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=49.27 E-value=14 Score=37.89 Aligned_cols=32 Identities=31% Similarity=0.687 Sum_probs=22.6
Q ss_pred cCCcCCCCCCCCcEEEeeccCceeecCCCCCC
Q 045873 290 QCHGCSLDIEGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 290 ~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
.|.+||...+.+..-.|..|+-.+|..|..-|
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PP 207 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPP 207 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC--CC
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccCCCC
Confidence 58889876544556779999999999998743
No 94
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=48.79 E-value=12 Score=33.51 Aligned_cols=31 Identities=26% Similarity=0.643 Sum_probs=27.9
Q ss_pred eecccccccccCCCceEeCC-CCCceeecccc
Q 045873 711 LRCEICKEERNPNHPSYGCV-ECECHAHVRCV 741 (868)
Q Consensus 711 ~~C~vC~~~~d~~~~~Y~C~-~C~~~lH~~C~ 741 (868)
|.|++|++..+...-+-.|+ .|..=+|..|+
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CV 35 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECT 35 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccC
Confidence 78999999988776778898 89999999999
No 95
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=45.81 E-value=18 Score=35.53 Aligned_cols=57 Identities=23% Similarity=0.528 Sum_probs=39.0
Q ss_pred ccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCCCCCCc
Q 045873 289 SQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETNPSHPC 368 (868)
Q Consensus 289 ~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d~~~~~ 368 (868)
..|.+|+..+ -...|..|+-.+|..|...|- . ..| .++|.|..|...... ...
T Consensus 5 ~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l---~-------------------~~p-~~~W~C~~C~~~~~~-~~e 57 (184)
T 3o36_A 5 DWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTL---T-------------------NFP-SGEWICTFCRDLSKP-EVE 57 (184)
T ss_dssp SSCTTTCCCS---SCEECSSSSCEECTTTSSSCC---S-------------------SCC-SSCCCCTTTSCSSSC-SSC
T ss_pred CccccCCCCC---eeeecCCCCcccCccccCCCC---C-------------------CCC-CCCEECccccCcccc-ccc
Confidence 4699999664 256799999999999975430 0 122 467999999877643 233
Q ss_pred ccCC
Q 045873 369 YGCS 372 (868)
Q Consensus 369 Y~C~ 372 (868)
|.|+
T Consensus 58 ~dc~ 61 (184)
T 3o36_A 58 YDCD 61 (184)
T ss_dssp CGGG
T ss_pred cccc
Confidence 5554
No 96
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=45.64 E-value=11 Score=30.10 Aligned_cols=47 Identities=28% Similarity=0.593 Sum_probs=32.8
Q ss_pred cccccccccCcCCceeEEecC--cc-eeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVE--CK-LNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~--C~-f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
...| +|++...+ ....|.. |. -..|..|+. |+.+ +.|+ |.|..|.++
T Consensus 10 ~~~C-~C~~~~~g-~mi~CD~cdC~~~wfH~~Cvg--l~~~--------------------p~g~-w~C~~C~~~ 59 (60)
T 2vnf_A 10 PTYC-LCHQVSYG-EMIGCDNPDCSIEWFHFACVG--LTTK--------------------PRGK-WFCPRCSQE 59 (60)
T ss_dssp CEET-TTTEECCS-EEEECSCTTCSSCEEETGGGT--CSSC--------------------CSSC-CCCHHHHC-
T ss_pred CCEE-ECCCcCCC-CEEEeCCCCCCCceEehhcCC--CCcC--------------------CCCC-EECcCccCc
Confidence 3467 89976444 3778998 54 579999999 7631 2256 999998764
No 97
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=45.34 E-value=9.3 Score=33.14 Aligned_cols=56 Identities=25% Similarity=0.458 Sum_probs=38.1
Q ss_pred ccccccccCcC--CceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccccc
Q 045873 649 SKCEACRCDIE--GTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERN 721 (868)
Q Consensus 649 ~~C~~C~~~~~--~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d 721 (868)
..|.+|+.... ....+.|..|+-.+|..|.. -|-.-. .+....|+ |.|..|.....
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~--Ppl~~~--------------~~~~p~g~-W~C~~C~~~~~ 74 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHK--PQVTDK--------------EVNDPRLV-WYCARCTRQMK 74 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSS--SCCCHH--------------HHHCTTCC-CCCHHHHHHHC
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCC--Cccccc--------------ccCCCCCC-eeCccccchhh
Confidence 47999996642 23478899999999999998 441100 00123467 99999977654
No 98
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=44.96 E-value=13 Score=30.82 Aligned_cols=52 Identities=19% Similarity=0.443 Sum_probs=37.2
Q ss_pred CCCcCcccccccccCCCcEEecCCCcccccccCCCCCceecccCCCCccccCCccccccccccce
Q 045873 414 DDIECHACENLIIQGHSAYGCDPCRFYLHKSCFELPKVMKHISDSHYLTLQNSSFSERCTACGQQ 478 (868)
Q Consensus 414 ~~~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~lPr~i~h~~~~~~L~~~~~~~~~~C~~C~~~ 478 (868)
....| .|+.+...+...-.|..|+-.+|-.|++++.... .. ..|.|..|.+.
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~--------~~----~~~~C~~C~~~ 66 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADA--------LP----SKFLCFRCIEL 66 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSC--------CC----SCCCCHHHHHH
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcccc--------CC----CcEECCCccCC
Confidence 45789 6988864223568899999999999999875421 01 26788888754
No 99
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=44.43 E-value=22 Score=35.65 Aligned_cols=59 Identities=22% Similarity=0.513 Sum_probs=39.7
Q ss_pred CccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCCCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETNPSHP 367 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d~~~~ 367 (868)
...|.+|+..+ -...|..|+-.+|..|..-| + . ..| .++|.|..|...... ..
T Consensus 7 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~-----l---------~--------~~p-~~~W~C~~C~~~~~~-~~ 59 (207)
T 3u5n_A 7 EDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPT-----L---------L--------SFP-SGDWICTFCRDIGKP-EV 59 (207)
T ss_dssp CSSBTTTCCCE---EEEECSSSSCEECTTTSSSC-----C---------S--------SCC-SSCCCCTTTSCSSSC-SS
T ss_pred CCCCCCCCCCC---ceEEcCCCCCccCCccCCCC-----C---------C--------CCC-CCCEEeCceeCcccc-cc
Confidence 34699998654 36779999999999997533 0 0 122 468999999876543 23
Q ss_pred cccCCC
Q 045873 368 CYGCSE 373 (868)
Q Consensus 368 ~Y~C~~ 373 (868)
.|.|+.
T Consensus 60 ~~~c~~ 65 (207)
T 3u5n_A 60 EYDCDN 65 (207)
T ss_dssp CCSCC-
T ss_pred cccccc
Confidence 455543
No 100
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=43.22 E-value=21 Score=31.24 Aligned_cols=51 Identities=27% Similarity=0.628 Sum_probs=36.2
Q ss_pred cccccccccCcCCceeEEecC--cc-eeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccCC
Q 045873 648 KSKCEACRCDIEGTFFLRCVE--CK-LNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNPN 723 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~--C~-f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~~ 723 (868)
...| +|++...+. +..|.. |. -..|..|+. |+.+ ..++ |.|..|.++..+.
T Consensus 36 ~~yC-iC~~~~~g~-MI~CD~~dC~~~WfH~~CVg--l~~~--------------------p~g~-W~Cp~C~~~~~k~ 89 (91)
T 1weu_A 36 PTYC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVG--LTTK--------------------PRGK-WFCPRCSQESGPS 89 (91)
T ss_dssp CBCS-TTCCBCCSC-CCCCSCSSCSCCCCCSTTTT--CSSC--------------------CCSS-CCCTTTCCCCSSS
T ss_pred CcEE-ECCCCCCCC-EeEecCCCCCCCCEecccCC--cCcC--------------------CCCC-EECcCccCcCCcC
Confidence 4578 999765443 667888 65 479999999 7631 1256 9999998876543
No 101
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=42.90 E-value=15 Score=28.45 Aligned_cols=29 Identities=24% Similarity=0.508 Sum_probs=23.9
Q ss_pred cCCCCCCCCcEEEeeccCceeecCCCCCC
Q 045873 293 GCSLDIEGTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 293 ~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
.||+..+++..-.|..|+--+|.+|+.+.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~ 36 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIR 36 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCC
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCC
Confidence 57776545678899999999999999875
No 102
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=42.49 E-value=13 Score=43.45 Aligned_cols=46 Identities=26% Similarity=0.566 Sum_probs=36.1
Q ss_pred ccCccccccccccCCCcCccccccccc-CCCcEEecCCCcccccccCCC
Q 045873 401 HHHLLVLLENERNDDIECHACENLIIQ-GHSAYGCDPCRFYLHKSCFEL 448 (868)
Q Consensus 401 H~H~L~l~~~~~~~~~~C~aC~~~~~~-~~~~Y~C~~C~F~lH~~C~~l 448 (868)
..|.+...+ ......|..|+..+++ ....|.|..|+|.+|+.|+..
T Consensus 517 ~~H~F~~~~--~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 517 NGHDFQMFS--FEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp GGCCEEEEC--CSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred cCCceeEEe--CCCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 357766655 4457899999998862 246799999999999999983
No 103
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=42.44 E-value=14 Score=29.61 Aligned_cols=32 Identities=22% Similarity=0.413 Sum_probs=24.0
Q ss_pred CccCCcCCCCCCCCcEEEeec--cCc-eeecCCCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVE--CKL-DFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~--C~f-~lH~~C~~lp 321 (868)
...| +|++.. .+..-.|.. |.. .+|..|+.|.
T Consensus 9 ~~yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvgl~ 43 (59)
T 3c6w_A 9 PTYC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVDLT 43 (59)
T ss_dssp CEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CcEE-ECCCCC-CCCeeEeeCCCCCCCCEecccCCcc
Confidence 3457 898865 456778888 665 8999998875
No 104
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=41.61 E-value=20 Score=30.98 Aligned_cols=33 Identities=24% Similarity=0.545 Sum_probs=25.5
Q ss_pred ccCCcCCCCCC--CCcEEEeeccCceeecCCCCCC
Q 045873 289 SQCHGCSLDIE--GTFFARCVECKLDFHVQCGPAP 321 (868)
Q Consensus 289 ~~C~~Cg~~~~--~~~~Y~C~~C~f~lH~~C~~lp 321 (868)
..|.+|+.... ......|..|+-.+|..|..-|
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp 51 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ 51 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc
Confidence 46999987632 2456779999999999998744
No 105
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=41.48 E-value=18 Score=36.98 Aligned_cols=49 Identities=27% Similarity=0.654 Sum_probs=32.0
Q ss_pred cccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCC-Ceeeccccccc
Q 045873 650 KCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDG-DLLRCEICKEE 719 (868)
Q Consensus 650 ~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g-~~~~C~vC~~~ 719 (868)
.|.+|+........+.|..|+-..|..|.. -| |. . .+.| + |.|..|..+
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~--PP-----------L~--~-----vP~G~~-W~Cp~C~~~ 225 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCLD--PP-----------LS--S-----VPSEDE-WYCPECRND 225 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC----CC-----------CC--S-----CCSSSC-CCCGGGC--
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccCC--CC-----------cc--c-----CCCCCC-CCCcCCcCc
Confidence 588898665555588899999999999998 44 11 1 1335 6 999999753
No 106
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=41.22 E-value=25 Score=28.27 Aligned_cols=56 Identities=18% Similarity=0.462 Sum_probs=38.0
Q ss_pred cccccccccCc--CCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccccc
Q 045873 648 KSKCEACRCDI--EGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERN 721 (868)
Q Consensus 648 ~~~C~~C~~~~--~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d 721 (868)
...|.+|+... .....+.|..|+-.+|..|.. .|-.- . ++ .+.|+ |.|..|.....
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~--p~l~~-------------~-~~-~p~~~-W~C~~C~~~~~ 63 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHT--PHIDS-------------S-VI-DSDEK-WLCRQCVFATT 63 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSS--SCCCH-------------H-HH-HSSCC-CCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCC--Ccccc-------------c-cc-CCCCC-EECCCCcCccc
Confidence 35899999652 224588899999999999998 44110 0 00 12356 99999976543
No 107
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=40.98 E-value=18 Score=30.46 Aligned_cols=33 Identities=27% Similarity=0.613 Sum_probs=27.5
Q ss_pred CccCCcCCCCCCCCcEEEee--ccCceeecCCCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCV--ECKLDFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~--~C~f~lH~~C~~lp 321 (868)
...| +||.....+..-.|. .|+..+|..|+.++
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~ 50 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILP 50 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCC
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEccc
Confidence 4568 799874467888999 99999999999886
No 108
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=40.88 E-value=14 Score=30.14 Aligned_cols=31 Identities=29% Similarity=0.644 Sum_probs=28.5
Q ss_pred eecccccccccCCCceEeCC-CCCceeecccc
Q 045873 711 LRCEICKEERNPNHPSYGCV-ECECHAHVRCV 741 (868)
Q Consensus 711 ~~C~vC~~~~d~~~~~Y~C~-~C~~~lH~~C~ 741 (868)
+-|++|++..+++...=.|+ .|..-+|..|+
T Consensus 9 ~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cv 40 (65)
T 2vpb_A 9 YPCGICTNEVNDDQDAILCEASCQKWFHRICT 40 (65)
T ss_dssp CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHH
T ss_pred CcCccCCCccCCCCCeEecccCccccCchhcc
Confidence 78999999998887777899 99999999999
No 109
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=40.87 E-value=20 Score=30.19 Aligned_cols=58 Identities=28% Similarity=0.607 Sum_probs=40.1
Q ss_pred cccccccccCcCCceeEEec--CcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccC
Q 045873 648 KSKCEACRCDIEGTFFLRCV--ECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNP 722 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~--~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~ 722 (868)
...| +|+.......+-.|. .|..-.|..|+. |+..-.-. . +....+ |.|..|.++..+
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVg--i~~~~~~~---------~----~~~~~~-~~C~~C~~~~~~ 75 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVI--LPDKPMDG---------N----PPLPES-FYCEICRLTSGP 75 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHS--CCCTTTCS---------C----SCSCSS-CCCHHHHHCCSC
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEc--cccccccc---------c----ccCCCC-EECCCCCcccCC
Confidence 4578 799874444577899 999999999999 87543210 0 123356 999999876543
No 110
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=40.56 E-value=27 Score=28.58 Aligned_cols=54 Identities=20% Similarity=0.615 Sum_probs=36.0
Q ss_pred cccccccccCcCCceeEEec--CcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCV--ECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~--~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
...| +|+.......+..|. .|+.-.|..|+. |+..-... . ....+ |.|..|+.+
T Consensus 10 ~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvg--i~~~~~~~----------~----~~p~~-~~C~~Cr~~ 65 (68)
T 2rsd_A 10 KVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVL--IPDKPGES----------A----EVPPV-FYCELCRLS 65 (68)
T ss_dssp EECC-TTCCCSCCSCEEECSCTTTCEEEETTTSC--CCSSTTSC----------C----CCCSS-CCCHHHHHH
T ss_pred CEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCC--CCcccccc----------c----CCCCc-EECcCccCc
Confidence 3467 798765555577896 599999999999 76422110 0 12245 999999754
No 111
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=40.24 E-value=14 Score=41.74 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=28.9
Q ss_pred CCCCCCCCCCCCCCC---ceeeCcCCCCCcccchhhhcCC
Q 045873 45 HPEKCSACDRQPSGS---FYFCKQCWPKSPFFHKLCAELP 81 (868)
Q Consensus 45 ~~~~C~~C~~~~~g~---~Y~C~~C~~~~f~~H~~C~~~p 81 (868)
.|+.|..|+..+||. +|.|..|. +.+|++|+...
T Consensus 219 ~pt~C~~C~~~l~g~~~qg~~C~~C~---~~~Hk~C~~~v 255 (463)
T 3cxl_A 219 GPHWCEYCANFMWGLIAQGVKCADCG---LNVHKQCSKMV 255 (463)
T ss_dssp SCCBCTTTCCBCCSSSCCEEEETTTC---CEECHHHHTTS
T ss_pred CCCcchhhhhhhhhHHhcCeeccccC---ccccccccccc
Confidence 467899999989986 79999997 79999999753
No 112
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=39.86 E-value=17 Score=29.42 Aligned_cols=47 Identities=23% Similarity=0.504 Sum_probs=33.4
Q ss_pred cccccccccCcCCceeEEecCcc---eeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVECK---LNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEE 719 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~---f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~ 719 (868)
...| +|++...+ ....|..|+ -..|..|+. |+.. ..++ |.|..|.++
T Consensus 11 ~~yC-~C~~~~~g-~MI~CD~c~C~~~WfH~~Cvg--l~~~--------------------p~~~-w~Cp~C~~~ 60 (62)
T 2g6q_A 11 PTYC-LCNQVSYG-EMIGCDNEQCPIEWFHFSCVS--LTYK--------------------PKGK-WYCPKCRGD 60 (62)
T ss_dssp CEET-TTTEECCS-EEEECSCTTCSSCEEETGGGT--CSSC--------------------CSSC-CCCHHHHTC
T ss_pred CcEE-ECCCCCCC-CeeeeeCCCCCcccEecccCC--cCcC--------------------CCCC-EECcCcccC
Confidence 3568 89976444 377788854 689999999 7631 1256 999999765
No 113
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=37.65 E-value=19 Score=29.34 Aligned_cols=38 Identities=18% Similarity=0.515 Sum_probs=30.3
Q ss_pred ccccccccccccCC-CcEeee-cCCceeehhhhcCCcccc
Q 045873 773 GVVCYACEKLVRGQ-PTYGCD-QCRFYLHKSCAELPRQIQ 810 (868)
Q Consensus 773 ~~~C~~C~~~i~~~-~~y~C~-~CdFilH~~CA~lPr~k~ 810 (868)
...|..|..|.+.+ ..-.|. .|+--.|.+|++|.....
T Consensus 8 ~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~ 47 (65)
T 2vpb_A 8 VYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAY 47 (65)
T ss_dssp -CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHH
T ss_pred cCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHH
Confidence 56899999998755 445788 999999999999987543
No 114
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=37.32 E-value=30 Score=33.88 Aligned_cols=58 Identities=28% Similarity=0.696 Sum_probs=40.5
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccCCCceEe
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNPNHPSYG 728 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~~~~~Y~ 728 (868)
..|.+|+.. +. .+.|..|+-..|..|.. .|- . . .+.|+ |.|..|+....+. ..|.
T Consensus 5 ~~C~~C~~~--g~-ll~Cd~C~~~~H~~C~~--p~l-----------~---~----~p~~~-W~C~~C~~~~~~~-~e~d 59 (184)
T 3o36_A 5 DWCAVCQNG--GE-LLCCEKCPKVFHLSCHV--PTL-----------T---N----FPSGE-WICTFCRDLSKPE-VEYD 59 (184)
T ss_dssp SSCTTTCCC--SS-CEECSSSSCEECTTTSS--SCC-----------S---S----CCSSC-CCCTTTSCSSSCS-SCCG
T ss_pred CccccCCCC--Ce-eeecCCCCcccCccccC--CCC-----------C---C----CCCCC-EECccccCccccc-cccc
Confidence 469999933 33 78899999999999997 331 0 1 13467 9999999876543 3366
Q ss_pred CCC
Q 045873 729 CVE 731 (868)
Q Consensus 729 C~~ 731 (868)
|+.
T Consensus 60 c~~ 62 (184)
T 3o36_A 60 CDA 62 (184)
T ss_dssp GGC
T ss_pred ccc
Confidence 643
No 115
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=37.18 E-value=17 Score=29.04 Aligned_cols=31 Identities=23% Similarity=0.369 Sum_probs=23.1
Q ss_pred ccCCcCCCCCCCCcEEEeec--cC-ceeecCCCCCC
Q 045873 289 SQCHGCSLDIEGTFFARCVE--CK-LDFHVQCGPAP 321 (868)
Q Consensus 289 ~~C~~Cg~~~~~~~~Y~C~~--C~-f~lH~~C~~lp 321 (868)
..| +|++.. .+..-.|.. |. -.+|..|+.|.
T Consensus 11 ~~C-~C~~~~-~g~mi~CD~cdC~~~wfH~~Cvgl~ 44 (60)
T 2vnf_A 11 TYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVGLT 44 (60)
T ss_dssp EET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CEE-ECCCcC-CCCEEEeCCCCCCCceEehhcCCCC
Confidence 457 898865 466778888 54 47999998875
No 116
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=37.15 E-value=17 Score=40.03 Aligned_cols=33 Identities=27% Similarity=0.702 Sum_probs=29.3
Q ss_pred ccccccccceecCc--eeEeeccCCeeeccccccc
Q 045873 469 SERCTACGQQLKGN--AIYHCETCDFDLDLDCAAQ 501 (868)
Q Consensus 469 ~~~C~~C~~~~~g~--~~Y~C~~C~~~lh~~Ca~~ 501 (868)
...|..|++.+.|. .+|+|..|++.+|.+|+..
T Consensus 357 ~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 357 TTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 45799999999775 6799999999999999987
No 117
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=34.79 E-value=31 Score=28.27 Aligned_cols=49 Identities=22% Similarity=0.555 Sum_probs=36.9
Q ss_pred CCCcCcccccccccCCCcEEecCCCcccccccCCCCCceecccCCCCccccCCccccccccccc
Q 045873 414 DDIECHACENLIIQGHSAYGCDPCRFYLHKSCFELPKVMKHISDSHYLTLQNSSFSERCTACGQ 477 (868)
Q Consensus 414 ~~~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~lPr~i~h~~~~~~L~~~~~~~~~~C~~C~~ 477 (868)
+...| .|+.+.. +...-.|..|+-.+|-.|++++... + . ..|.|..|.+
T Consensus 18 ~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~--------~-~----~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSN--------V-P----EVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTS--------C-C----SSCCCHHHHT
T ss_pred CceEe-ECCCcCC-CCCEEECCCCCccccccccCcCccc--------C-C----CcEECCCCCC
Confidence 46889 9988766 3467899999999999999987641 0 1 2677888764
No 118
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=34.15 E-value=36 Score=34.03 Aligned_cols=57 Identities=30% Similarity=0.702 Sum_probs=39.6
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeecccccccccCCCceEe
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERNPNHPSYG 728 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d~~~~~Y~ 728 (868)
..|.+|+.. + ..+.|..|+-..|..|.. -| |. ..+.|+ |.|..|.....+. ..|.
T Consensus 8 ~~C~~C~~~--g-~ll~Cd~C~~~~H~~Cl~--p~-----------l~-------~~p~~~-W~C~~C~~~~~~~-~~~~ 62 (207)
T 3u5n_A 8 DWCAVCQNG--G-DLLCCEKCPKVFHLTCHV--PT-----------LL-------SFPSGD-WICTFCRDIGKPE-VEYD 62 (207)
T ss_dssp SSBTTTCCC--E-EEEECSSSSCEECTTTSS--SC-----------CS-------SCCSSC-CCCTTTSCSSSCS-SCCS
T ss_pred CCCCCCCCC--C-ceEEcCCCCCccCCccCC--CC-----------CC-------CCCCCC-EEeCceeCccccc-cccc
Confidence 469999833 3 378899999999999997 33 10 123467 9999998765432 3455
Q ss_pred CC
Q 045873 729 CV 730 (868)
Q Consensus 729 C~ 730 (868)
|.
T Consensus 63 c~ 64 (207)
T 3u5n_A 63 CD 64 (207)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 119
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=33.15 E-value=23 Score=35.16 Aligned_cols=49 Identities=18% Similarity=0.562 Sum_probs=34.7
Q ss_pred ccCCcCCCCCCCCcEEEeeccCceeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCC
Q 045873 289 SQCHGCSLDIEGTFFARCVECKLDFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETN 363 (868)
Q Consensus 289 ~~C~~Cg~~~~~~~~Y~C~~C~f~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d 363 (868)
..|.+|+..++ ...|..|+-.+|..|..-| + + .. ..++|.|..|.....
T Consensus 3 ~~C~~C~~~g~---ll~Cd~C~~~~H~~Cl~p~-----l---------~--------~~-p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 3 TICRVCQKPGD---LVMCNQCEFCFHLDCHLPA-----L---------Q--------DV-PGEEWSCSLCHVLPD 51 (189)
T ss_dssp CCBTTTCCCSS---CCCCTTTCCBCCSTTSTTC-----C---------S--------SC-CCTTCCTTTTSCSCC
T ss_pred CcCccCCCCCc---eeECCCCCchhccccCCCC-----c---------c--------cC-CCCCCCCcCccCCCC
Confidence 46999997652 4459999999999998533 0 0 11 246899999986643
No 120
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=33.01 E-value=22 Score=31.80 Aligned_cols=35 Identities=20% Similarity=0.664 Sum_probs=28.0
Q ss_pred CccccCcCCCCCCCCcEEec-cCCCccccccCCCCc
Q 045873 178 TKCKFCCKSIHGSQSYYCCG-PCNFYIHKSCSELPQ 212 (868)
Q Consensus 178 ~~C~~C~~~~~~~~~~Y~C~-~Cd~~~H~~C~~~p~ 212 (868)
+.|..|+++....+..-.|. .|+-.||-+|+.+..
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~ 39 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTE 39 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCH
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCH
Confidence 47999998754455567898 899999999998764
No 121
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=32.68 E-value=19 Score=40.78 Aligned_cols=43 Identities=23% Similarity=0.643 Sum_probs=32.6
Q ss_pred CCceEEEecccccccccccceecccCCc---eEEcCCcCcccccccccC
Q 045873 581 RHSLTVQENTFQSRYFCDACRFDVKPGL---RYRCDECDFDLHLECLSL 626 (868)
Q Consensus 581 ~HpL~L~~~~~~~~~~C~~C~~~~~~g~---~Y~C~~C~~~lH~~Ca~~ 626 (868)
.|.+..... ....+|+.|++.+ -|. .|+|..|++..|.+|+..
T Consensus 209 ~h~f~~~~~--~~pt~C~~C~~~l-~g~~~qg~~C~~C~~~~Hk~C~~~ 254 (463)
T 3cxl_A 209 IHNFKVHTF--RGPHWCEYCANFM-WGLIAQGVKCADCGLNVHKQCSKM 254 (463)
T ss_dssp CCCEEEECC--SSCCBCTTTCCBC-CSSSCCEEEETTTCCEECHHHHTT
T ss_pred CcceEEeec--CCCCcchhhhhhh-hhHHhcCeeccccCcccccccccc
Confidence 355655432 2567999999987 553 599999999999999854
No 122
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=32.53 E-value=32 Score=30.28 Aligned_cols=65 Identities=22% Similarity=0.464 Sum_probs=0.0
Q ss_pred CcccccccccCcCCceeEEecC--cceeeecccCCCCCCCcc-cccCCCcceEeeeCCcccCCCCCeeecccccccc--c
Q 045873 647 CKSKCEACRCDIEGTFFLRCVE--CKLNFHVQCGPDWLPPTV-DQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEER--N 721 (868)
Q Consensus 647 ~~~~C~~C~~~~~~~~~y~C~~--C~f~lH~~C~~~~lP~~i-~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~--d 721 (868)
....|..|+ ..+...+.|.. |+++.+-+ .. --... ..+.-.|||.+..+. +. .||-.|+.+| |
T Consensus 24 ~~~~C~~C~--~~~~~lw~CL~~~Cg~vgCgr-~~--~~Ha~~H~~~t~H~~~~~l~~------~~-vwCy~cdd~V~~d 91 (97)
T 2uzg_A 24 SLGTCQDCK--VQGPNLWACLENRCSYVGCGE-SQ--VDHSTIHSQETKHYLTVNLTT------LR-VWCYACSKEVFLD 91 (97)
T ss_dssp TTTCCSSSC--CCCSSCEEECCTTCCCEECCT-TT--TCHHHHHHHHTTCCEEEETTT------TE-EEETTTTEEECCC
T ss_pred CCCcCcCcC--CCCCCceeeecccCCCcccCC-Cc--ChHHHHHhhhcCCcEEEECCC------CC-EEECCCCcEeecC
Q ss_pred CC
Q 045873 722 PN 723 (868)
Q Consensus 722 ~~ 723 (868)
++
T Consensus 92 ~~ 93 (97)
T 2uzg_A 92 RK 93 (97)
T ss_dssp SC
T ss_pred cc
No 123
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=30.26 E-value=34 Score=33.82 Aligned_cols=32 Identities=22% Similarity=0.669 Sum_probs=27.4
Q ss_pred CCeeecccccccccCCCc---eEeCCCCCceeecccc
Q 045873 708 GDLLRCEICKEERNPNHP---SYGCVECECHAHVRCV 741 (868)
Q Consensus 708 g~~~~C~vC~~~~d~~~~---~Y~C~~C~~~lH~~C~ 741 (868)
|+ .|.||++..+++.. .-.|+.|..=+|.+|+
T Consensus 2 G~--~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cv 36 (183)
T 3lqh_A 2 GN--FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCE 36 (183)
T ss_dssp CC--BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGS
T ss_pred cC--cCCCCcCccCCcccCCCeEECCCCCcccchhcc
Confidence 55 69999998876653 7789999999999999
No 124
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=30.05 E-value=27 Score=28.11 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=23.7
Q ss_pred CccCCcCCCCCCCCcEEEeeccC---ceeecCCCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECK---LDFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~---f~lH~~C~~lp 321 (868)
...| +|++.. .+..-.|..|+ -.+|..|+.|.
T Consensus 11 ~~yC-~C~~~~-~g~MI~CD~c~C~~~WfH~~Cvgl~ 45 (62)
T 2g6q_A 11 PTYC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVSLT 45 (62)
T ss_dssp CEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CcEE-ECCCCC-CCCeeeeeCCCCCcccEecccCCcC
Confidence 3457 898864 45677888844 68999998875
No 125
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=30.01 E-value=16 Score=29.38 Aligned_cols=32 Identities=25% Similarity=0.700 Sum_probs=25.6
Q ss_pred cccccccccccCCCcEeeecCCceeehhhhcC
Q 045873 774 VVCYACEKLVRGQPTYGCDQCRFYLHKSCAEL 805 (868)
Q Consensus 774 ~~C~~C~~~i~~~~~y~C~~CdFilH~~CA~l 805 (868)
..|.+|..++.+...|+|..|..++...|--.
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~f 47 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVF 47 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHH
Confidence 46999999986666799999988887777543
No 126
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=29.24 E-value=34 Score=29.83 Aligned_cols=48 Identities=29% Similarity=0.511 Sum_probs=34.2
Q ss_pred cccccccccCcCCceeEEecCcc---eeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccc-ccccc
Q 045873 648 KSKCEACRCDIEGTFFLRCVECK---LNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEI-CKEER 720 (868)
Q Consensus 648 ~~~C~~C~~~~~~~~~y~C~~C~---f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~v-C~~~~ 720 (868)
...| +|+....+. +..|..|+ -.+|..|+. |+.. ..++ |.|.. |.+..
T Consensus 26 ~~yC-iC~~~~~g~-MI~CD~c~C~~eWfH~~CVg--l~~~--------------------p~~~-W~Cp~cC~~~~ 77 (90)
T 2jmi_A 26 EVYC-FCRNVSYGP-MVACDNPACPFEWFHYGCVG--LKQA--------------------PKGK-WYCSKDCKEIA 77 (90)
T ss_dssp SCCS-TTTCCCSSS-EECCCSSSCSCSCEETTTSS--CSSC--------------------TTSC-CCSSHHHHHHH
T ss_pred CcEE-EeCCCCCCC-EEEecCCCCccccCcCccCC--CCcC--------------------CCCC-ccCChhhcchh
Confidence 3578 899765543 66788876 579999999 7631 1256 99999 87643
No 127
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=29.13 E-value=39 Score=29.48 Aligned_cols=50 Identities=22% Similarity=0.535 Sum_probs=34.2
Q ss_pred CccCCcCCCCCCCCcEEEeec--cCc-eeecCCCCCCCCCCeeeeccCCCceeeeecCCccCCCCcCccccccccccCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVE--CKL-DFHVQCGPAPSLPPTVVHKSHSHPLSLIDKSETLGTDDATHLYCDACKEETNP 364 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~--C~f-~lH~~C~~lp~~~~~I~~~~H~H~L~l~~~~~~~~~~~~~~~~C~vC~~~~d~ 364 (868)
...| +|++.. .+..-.|.. |.. .+|..|+.|.. .+ .++|.|..|..+...
T Consensus 36 ~~yC-iC~~~~-~g~MI~CD~~dC~~~WfH~~CVgl~~------------------------~p-~g~W~Cp~C~~~~~k 88 (91)
T 1weu_A 36 PTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVGLTT------------------------KP-RGKWFCPRCSQESGP 88 (91)
T ss_dssp CBCS-TTCCBC-CSCCCCCSCSSCSCCCCCSTTTTCSS------------------------CC-CSSCCCTTTCCCCSS
T ss_pred CcEE-ECCCCC-CCCEeEecCCCCCCCCEecccCCcCc------------------------CC-CCCEECcCccCcCCc
Confidence 3457 998865 355666888 554 79999988752 11 257889999876543
No 128
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=27.80 E-value=32 Score=30.02 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=23.8
Q ss_pred CccCCcCCCCCCCCcEEEeeccC---ceeecCCCCCC
Q 045873 288 ESQCHGCSLDIEGTFFARCVECK---LDFHVQCGPAP 321 (868)
Q Consensus 288 ~~~C~~Cg~~~~~~~~Y~C~~C~---f~lH~~C~~lp 321 (868)
...| +|+... .+..-.|..|+ -.+|..|+.|.
T Consensus 26 ~~yC-iC~~~~-~g~MI~CD~c~C~~eWfH~~CVgl~ 60 (90)
T 2jmi_A 26 EVYC-FCRNVS-YGPMVACDNPACPFEWFHYGCVGLK 60 (90)
T ss_dssp SCCS-TTTCCC-SSSEECCCSSSCSCSCEETTTSSCS
T ss_pred CcEE-EeCCCC-CCCEEEecCCCCccccCcCccCCCC
Confidence 3458 898765 34577788866 57999998875
No 129
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=27.73 E-value=25 Score=30.34 Aligned_cols=41 Identities=27% Similarity=0.598 Sum_probs=29.3
Q ss_pred cccCEEeecC--CcccccccccccCCeeeec--cCCccccccccCC
Q 045873 529 YHYLTVLDVG--DAECQLCHKNIHGTSYGCT--PCMFNIHESCAEL 570 (868)
Q Consensus 529 ~H~L~~l~~~--~~~C~~C~~~i~~~~Y~C~--~Cdf~lH~~Ca~l 570 (868)
.|.|. +..+ ...|..|+....|..-+|. .|.-.+|..||..
T Consensus 6 ~~~~N-Ip~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~ 50 (87)
T 2lq6_A 6 HHHMN-IPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQK 50 (87)
T ss_dssp ---CC-CCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHH
T ss_pred ccccC-CChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHH
Confidence 36666 5544 5689999865457788896 4999999999953
No 130
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=26.86 E-value=42 Score=29.28 Aligned_cols=13 Identities=31% Similarity=0.805 Sum_probs=9.4
Q ss_pred ccccccccceecC
Q 045873 469 SERCTACGQQLKG 481 (868)
Q Consensus 469 ~~~C~~C~~~~~g 481 (868)
.+.|..|++.+..
T Consensus 94 ~~~C~~C~~~f~~ 106 (124)
T 2dlq_A 94 PYKCSSCSQQFMQ 106 (124)
T ss_dssp SEECSSSCCEESS
T ss_pred CccCCCccchhCC
Confidence 4678888877754
No 131
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=26.68 E-value=46 Score=25.58 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=25.6
Q ss_pred ecccccccccCCCceEeCC-CCCceeecccc
Q 045873 712 RCEICKEERNPNHPSYGCV-ECECHAHVRCV 741 (868)
Q Consensus 712 ~C~vC~~~~d~~~~~Y~C~-~C~~~lH~~C~ 741 (868)
.|.+|++..+.+...-.|+ .|..=+|.+|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cv 34 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCV 34 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTT
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCccccc
Confidence 5789998887666677899 89999999999
No 132
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=26.06 E-value=68 Score=30.36 Aligned_cols=54 Identities=30% Similarity=0.701 Sum_probs=34.5
Q ss_pred CcCcccccccccCCCcEEecCCCcccccccCCCCCceecccCCCCccccCCccccccccccceecCceeEeeccCCeee
Q 045873 416 IECHACENLIIQGHSAYGCDPCRFYLHKSCFELPKVMKHISDSHYLTLQNSSFSERCTACGQQLKGNAIYHCETCDFDL 494 (868)
Q Consensus 416 ~~C~aC~~~~~~~~~~Y~C~~C~F~lH~~C~~lPr~i~h~~~~~~L~~~~~~~~~~C~~C~~~~~g~~~Y~C~~C~~~l 494 (868)
..|..|+... ..|.|..|.|+- ..+.|-|= -.|++||.-... .+|+|.+|+.-+
T Consensus 72 ~~C~~Cg~~f----~~Y~C~~C~l~d------~~k~~yHC--------------~~CgiCR~G~~~-~ffHC~~C~~C~ 125 (143)
T 2dkt_A 72 QTCEDCSTLF----GEYYCSICHLFD------KDKRQYHC--------------ESCGICRIGPKE-DFFHCLKCNLCL 125 (143)
T ss_dssp SBCSSSCCBS----CSEECSSSCCEE------CSSSEEEE--------------TTTTEEEESCGG-GEEEETTTTEEE
T ss_pred CcCCCCCccc----eeeEeceeeccc------CCCceecC--------------CCCCceeccCCc-CcEECCcCCeee
Confidence 3677775554 358999999881 22333222 268888875422 479999998644
No 133
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=23.43 E-value=45 Score=28.94 Aligned_cols=38 Identities=26% Similarity=0.642 Sum_probs=29.7
Q ss_pred CCCcCcccccccc---cCCCcEEecCCCcccccccCCCCCc
Q 045873 414 DDIECHACENLII---QGHSAYGCDPCRFYLHKSCFELPKV 451 (868)
Q Consensus 414 ~~~~C~aC~~~~~---~~~~~Y~C~~C~F~lH~~C~~lPr~ 451 (868)
...+|++|+..+. .+..|-.|.+|.|-|.+.|.+.-|+
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErk 55 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERR 55 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHH
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHh
Confidence 3578999999875 2347889999999998888875444
No 134
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=22.86 E-value=54 Score=27.20 Aligned_cols=36 Identities=19% Similarity=0.603 Sum_probs=29.6
Q ss_pred ccccccccccccCCCcEeeecCCceeehhhhcCCccc
Q 045873 773 GVVCYACEKLVRGQPTYGCDQCRFYLHKSCAELPRQI 809 (868)
Q Consensus 773 ~~~C~~C~~~i~~~~~y~C~~CdFilH~~CA~lPr~k 809 (868)
..+| .|..+-.++.--.|..|+-=.|..|++|+...
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~ 51 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEAR 51 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHH
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhh
Confidence 4678 79988655677889999989999999998754
No 135
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=21.41 E-value=66 Score=31.73 Aligned_cols=49 Identities=20% Similarity=0.634 Sum_probs=35.1
Q ss_pred ccccccccCcCCceeEEecCcceeeecccCCCCCCCcccccCCCcceEeeeCCcccCCCCCeeeccccccccc
Q 045873 649 SKCEACRCDIEGTFFLRCVECKLNFHVQCGPDWLPPTVDQQHHDHPLTLTTGTIVKDNDGDLLRCEICKEERN 721 (868)
Q Consensus 649 ~~C~~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~~i~~~~h~H~L~l~~g~~~~~~~g~~~~C~vC~~~~d 721 (868)
-.|.+|+.. +. .+.|..|+-..|..|.. -|- . . .+.|+ |.|..|.....
T Consensus 3 ~~C~~C~~~--g~-ll~Cd~C~~~~H~~Cl~--p~l-----------~--~-----~p~g~-W~C~~C~~~~~ 51 (189)
T 2ro1_A 3 TICRVCQKP--GD-LVMCNQCEFCFHLDCHL--PAL-----------Q--D-----VPGEE-WSCSLCHVLPD 51 (189)
T ss_dssp CCBTTTCCC--SS-CCCCTTTCCBCCSTTST--TCC-----------S--S-----CCCTT-CCTTTTSCSCC
T ss_pred CcCccCCCC--Cc-eeECCCCCchhccccCC--CCc-----------c--c-----CCCCC-CCCcCccCCCC
Confidence 369999943 33 77799999999999997 221 0 1 13467 99999987644
No 136
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=21.10 E-value=32 Score=29.92 Aligned_cols=33 Identities=18% Similarity=0.469 Sum_probs=27.6
Q ss_pred ccccccccccccCCCcEeeecCCceeehhhhcC
Q 045873 773 GVVCYACEKLVRGQPTYGCDQCRFYLHKSCAEL 805 (868)
Q Consensus 773 ~~~C~~C~~~i~~~~~y~C~~CdFilH~~CA~l 805 (868)
...|..|.......+.-+|.+|+-.+.++|...
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 578999986434568899999999999999974
No 137
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=20.30 E-value=75 Score=24.33 Aligned_cols=30 Identities=23% Similarity=0.603 Sum_probs=24.2
Q ss_pred ccccCcCCceeEEecCcceeeecccCCCCCCC
Q 045873 653 ACRCDIEGTFFLRCVECKLNFHVQCGPDWLPP 684 (868)
Q Consensus 653 ~C~~~~~~~~~y~C~~C~f~lH~~C~~~~lP~ 684 (868)
+|+++..+.....|..|+--.|.+|++ |+.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvg--i~~ 37 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAK--IRK 37 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTT--CCG
T ss_pred EeCCcCCCCCEEEcCCCCccccccccC--CCc
Confidence 577665555688899999999999999 764
No 138
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=20.01 E-value=59 Score=24.97 Aligned_cols=34 Identities=15% Similarity=0.542 Sum_probs=24.2
Q ss_pred cccCcCCCCCCCCcEEec-cCCCccccccCCCCcc
Q 045873 180 CKFCCKSIHGSQSYYCCG-PCNFYIHKSCSELPQQ 213 (868)
Q Consensus 180 C~~C~~~~~~~~~~Y~C~-~Cd~~~H~~C~~~p~~ 213 (868)
|-.|+++....+.--.|. .|+-.||..|+.+..+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~ 39 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPE 39 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHH
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCcc
Confidence 556766653334356899 8999999999987543
Done!