BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045875
LSNGGSATTRVIHPPRYLDTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYIS
GGPQPGGFYFTVPRDVHAVRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVP
GQSSDLPIQTLYSINGGDTYAWAFKATSDVVKLAKRVTKEIKENFSYNSNQHPIIIKLLE
IPILHAQVLRFFSITILAAHQIQLTIQISWLELTVT

High Scoring Gene Products

Symbol, full name Information P value
AT2G41810 protein from Arabidopsis thaliana 8.3e-51
AT2G41800 protein from Arabidopsis thaliana 2.9e-48
AT3G08030 protein from Arabidopsis thaliana 1.9e-42
DGR2
AT5G25460
protein from Arabidopsis thaliana 1.8e-32
AT4G32460 protein from Arabidopsis thaliana 9.8e-32
AT5G11420 protein from Arabidopsis thaliana 9.8e-32
DGR1
AT1G80240
protein from Arabidopsis thaliana 3.8e-30
AT2G34510 protein from Arabidopsis thaliana 2.9e-25
AT1G29980 protein from Arabidopsis thaliana 7.1e-24

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045875
        (216 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2054351 - symbol:AT2G41810 "AT2G41810" species...   528  8.3e-51   1
TAIR|locus:2054336 - symbol:AT2G41800 "AT2G41800" species...   504  2.9e-48   1
TAIR|locus:2077467 - symbol:AT3G08030 "AT3G08030" species...   449  1.9e-42   1
TAIR|locus:2145457 - symbol:DGR2 "AT5G25460" species:3702...   355  1.8e-32   1
TAIR|locus:2127831 - symbol:AT4G32460 "AT4G32460" species...   348  9.8e-32   1
TAIR|locus:2144206 - symbol:AT5G11420 "AT5G11420" species...   348  9.8e-32   1
TAIR|locus:2016324 - symbol:DGR1 "AT1G80240" species:3702...   333  3.8e-30   1
TAIR|locus:2062321 - symbol:AT2G34510 "AT2G34510" species...   287  2.9e-25   1
TAIR|locus:2198279 - symbol:AT1G29980 species:3702 "Arabi...   274  7.1e-24   1


>TAIR|locus:2054351 [details] [associations]
            symbol:AT2G41810 "AT2G41810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC002339 InterPro:IPR008979
            SUPFAM:SSF49785 EMBL:BT006039 EMBL:AK117641 IPI:IPI00520555
            PIR:D84846 RefSeq:NP_181712.1 UniGene:At.42786
            ProteinModelPortal:O22939 PaxDb:O22939 PRIDE:O22939
            EnsemblPlants:AT2G41810.1 GeneID:818780 KEGG:ath:AT2G41810
            TAIR:At2g41810 eggNOG:NOG255242 HOGENOM:HOG000231422
            InParanoid:O22939 OMA:QEDPTCG PhylomeDB:O22939 ProtClustDB:PLN03089
            ArrayExpress:O22939 Genevestigator:O22939 InterPro:IPR006946
            Pfam:PF04862 Uniprot:O22939
        Length = 370

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 99/137 (72%), Positives = 115/137 (83%)

Query:    17 YLDTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPRDV 76
             +LD LLPNGNFE  P KSN+ K+ I+ KYSLP WEISG VE +SGGPQPGGFYF VPR V
Sbjct:    29 HLDGLLPNGNFEQIPNKSNMRKRQIIGKYSLPHWEISGHVELVSGGPQPGGFYFAVPRGV 88

Query:    77 HAVRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSDLPIQTLYSING 136
             HA RLG  ASIS+ V+VK G +YSLTFG TRTCAQDE +R+ VPGQ+++LPIQTL+S NG
Sbjct:    89 HAARLGNLASISQYVKVKSGLVYSLTFGVTRTCAQDENIRISVPGQTNELPIQTLFSTNG 148

Query:   137 GDTYAWAFKATSDVVKL 153
             GDTYAWAFKATSD+VK+
Sbjct:   149 GDTYAWAFKATSDLVKV 165


>TAIR|locus:2054336 [details] [associations]
            symbol:AT2G41800 "AT2G41800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0009505 "plant-type cell wall" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC002339 GO:GO:0009505
            InterPro:IPR008979 SUPFAM:SSF49785 HOGENOM:HOG000231422
            ProtClustDB:PLN03089 InterPro:IPR006946 Pfam:PF04862 EMBL:AY070757
            EMBL:AY097378 IPI:IPI00524855 PIR:C84846 RefSeq:NP_181711.1
            UniGene:At.27769 ProteinModelPortal:O22940 PaxDb:O22940
            PRIDE:O22940 EnsemblPlants:AT2G41800.1 GeneID:818779
            KEGG:ath:AT2G41800 TAIR:At2g41800 eggNOG:NOG287828
            InParanoid:O22940 OMA:QIIRTIA PhylomeDB:O22940 ArrayExpress:O22940
            Genevestigator:O22940 Uniprot:O22940
        Length = 370

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 95/144 (65%), Positives = 118/144 (81%)

Query:    12 IHPPR--YLDTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFY 69
             + P R  +LD +LPNGNFE++P KSN+  + I+   SLP WEI+G VE +SGGPQPGGFY
Sbjct:    22 LQPRRVPHLDGILPNGNFEITPLKSNMKGRQIIGANSLPHWEIAGHVELVSGGPQPGGFY 81

Query:    70 FTVPRDVHAVRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSDLPIQ 129
             F VPR VHAVRLG   +IS+NVRVK G +YSLTFG TRTCAQDE ++V VPGQ+++LP+Q
Sbjct:    82 FPVPRGVHAVRLGNLGTISQNVRVKSGLVYSLTFGATRTCAQDENIKVSVPGQANELPLQ 141

Query:   130 TLYSINGGDTYAWAFKATSDVVKL 153
             T++S +GGDTYAWAFKATSDVVK+
Sbjct:   142 TVFSSDGGDTYAWAFKATSDVVKV 165


>TAIR|locus:2077467 [details] [associations]
            symbol:AT3G08030 "AT3G08030" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005618 "cell wall" evidence=IDA] [GO:0009740
            "gibberellic acid mediated signaling pathway" evidence=RCA]
            [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0015995
            "chlorophyll biosynthetic process" evidence=RCA] [GO:0005886
            "plasma membrane" evidence=IDA] GO:GO:0005886 GO:GO:0005618
            EMBL:CP002686 EMBL:AC013483 HOGENOM:HOG000231422
            ProtClustDB:PLN03089 InterPro:IPR006946 Pfam:PF04862 EMBL:AY072318
            EMBL:AY086764 EMBL:BT000740 EMBL:BT002544 IPI:IPI00536101
            RefSeq:NP_566328.1 UniGene:At.21652 UniGene:At.67126
            ProteinModelPortal:Q9SFB1 SMR:Q9SFB1 PRIDE:Q9SFB1
            EnsemblPlants:AT3G08030.1 GeneID:819994 KEGG:ath:AT3G08030
            TAIR:At3g08030 InParanoid:Q9SFB1 OMA:FAATRTC PhylomeDB:Q9SFB1
            ArrayExpress:Q9SFB1 Genevestigator:Q9SFB1 Uniprot:Q9SFB1
        Length = 365

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 87/130 (66%), Positives = 103/130 (79%)

Query:    22 LPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPRDVHAVRL 81
             L NGNFE SPKK+++ K V+L K +LP+WE +G VEYI+GGPQPGG YF V   VHAVRL
Sbjct:    29 LRNGNFEESPKKTDMKKTVLLGKNALPEWETTGFVEYIAGGPQPGGMYFPVAHGVHAVRL 88

Query:    82 GYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSDLPIQTLYSINGGDTYA 141
             G EA+IS+ + VK GS+Y+LTFG +RTCAQDEVLRV VP QS DLP+QTLY+  GGD YA
Sbjct:    89 GNEATISQKLEVKPGSLYALTFGASRTCAQDEVLRVSVPSQSGDLPLQTLYNSFGGDVYA 148

Query:   142 WAFKA-TSDV 150
             WAF A TS V
Sbjct:   149 WAFVAKTSQV 158


>TAIR|locus:2145457 [details] [associations]
            symbol:DGR2 "AT5G25460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009505 "plant-type cell
            wall" evidence=IDA] [GO:0080167 "response to karrikin"
            evidence=IEP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010015
            "root morphogenesis" evidence=IMP] GO:GO:0009506 EMBL:CP002688
            GO:GO:0080167 GO:GO:0009505 InterPro:IPR008979 SUPFAM:SSF49785
            GO:GO:0010015 UniGene:At.19291 UniGene:At.23562
            ProtClustDB:PLN03089 InterPro:IPR006946 Pfam:PF04862 EMBL:AF386962
            EMBL:BT008446 IPI:IPI00528982 RefSeq:NP_197928.1
            ProteinModelPortal:Q94F20 IntAct:Q94F20 STRING:Q94F20 PRIDE:Q94F20
            EnsemblPlants:AT5G25460.1 GeneID:832620 KEGG:ath:AT5G25460
            TAIR:At5g25460 InParanoid:Q94F20 OMA:DANNACK PhylomeDB:Q94F20
            Genevestigator:Q94F20 Uniprot:Q94F20
        Length = 369

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 69/137 (50%), Positives = 90/137 (65%)

Query:    17 YLDTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPRDV 76
             + D +LPNG+FEL PK S++    IL K ++P WE++G VEYI  G + G     VP   
Sbjct:    26 FRDGMLPNGDFELGPKPSDMKGTEILNKLAIPNWEVTGFVEYIKSGHKQGDMLLVVPAGK 85

Query:    77 HAVRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSDLPIQTLYSING 136
              AVRLG EASI + ++V +G  YSLTF   RTCAQDE L + V   S  +PIQT+YS +G
Sbjct:    86 FAVRLGNEASIKQRLKVVKGMYYSLTFSAARTCAQDERLNISVAPDSGVIPIQTVYSSSG 145

Query:   137 GDTYAWAFKATSDVVKL 153
              D YAWAF+A SDV ++
Sbjct:   146 WDLYAWAFQAESDVAEV 162


>TAIR|locus:2127831 [details] [associations]
            symbol:AT4G32460 "AT4G32460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009505 "plant-type cell
            wall" evidence=IDA] EMBL:CP002687 GO:GO:0009505 InterPro:IPR008979
            SUPFAM:SSF49785 UniGene:At.24424 UniGene:At.66647
            ProtClustDB:PLN03089 InterPro:IPR006946 Pfam:PF04862 EMBL:AY087668
            EMBL:BT025248 IPI:IPI00516429 RefSeq:NP_567894.1 RefSeq:NP_974661.1
            ProteinModelPortal:Q8LAR0 SMR:Q8LAR0 PRIDE:Q8LAR0
            EnsemblPlants:AT4G32460.1 EnsemblPlants:AT4G32460.2 GeneID:829381
            KEGG:ath:AT4G32460 TAIR:At4g32460 InParanoid:Q8LAR0 OMA:IKVPYES
            PhylomeDB:Q8LAR0 Genevestigator:Q8LAR0 Uniprot:Q8LAR0
        Length = 365

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 67/131 (51%), Positives = 87/131 (66%)

Query:    19 DTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPRDVHA 78
             D LLPNG+FEL P+ S++    ++   ++P WE+SG VEYI  G + G     VP+   A
Sbjct:    24 DGLLPNGDFELGPRHSDMKGTQVINITAIPNWELSGFVEYIPSGHKQGDMILVVPKGAFA 83

Query:    79 VRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSDLPIQTLYSINGGD 138
             VRLG EASI + + VK+GS YS+TF   RTCAQDE L V V    + +PIQT+YS +G D
Sbjct:    84 VRLGNEASIKQKISVKKGSYYSITFSAARTCAQDERLNVSVAPHHAVMPIQTVYSSSGWD 143

Query:   139 TYAWAFKATSD 149
              Y+WAFKA SD
Sbjct:   144 LYSWAFKAQSD 154


>TAIR|locus:2144206 [details] [associations]
            symbol:AT5G11420 "AT5G11420" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0009505 "plant-type cell wall" evidence=IDA]
            EMBL:CP002688 EMBL:AL163815 GO:GO:0009505 InterPro:IPR008979
            SUPFAM:SSF49785 ProtClustDB:PLN03089 InterPro:IPR006946
            Pfam:PF04862 EMBL:AY046047 EMBL:AY096359 IPI:IPI00547100 PIR:T48501
            RefSeq:NP_196703.1 UniGene:At.21285 UniGene:At.67832
            ProteinModelPortal:Q9LYE7 STRING:Q9LYE7 PRIDE:Q9LYE7
            EnsemblPlants:AT5G11420.1 GeneID:831013 KEGG:ath:AT5G11420
            TAIR:At5g11420 InParanoid:Q9LYE7 OMA:DANNACQ PhylomeDB:Q9LYE7
            Genevestigator:Q9LYE7 Uniprot:Q9LYE7
        Length = 366

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 66/137 (48%), Positives = 89/137 (64%)

Query:    17 YLDTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPRDV 76
             + D +LPNG+FEL PK S++    ++ K ++P WE+SG VEYI  G + G     VP   
Sbjct:    23 FSDGMLPNGDFELGPKPSDMKGTQVINKKAIPSWELSGFVEYIKSGQKQGDMLLVVPAGK 82

Query:    77 HAVRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSDLPIQTLYSING 136
              A+RLG EASI + + V +G  YSLTF   RTCAQDE L + V   S  +PIQT+YS +G
Sbjct:    83 FAIRLGNEASIKQRLNVTKGMYYSLTFSAARTCAQDERLNISVAPDSGVIPIQTVYSSSG 142

Query:   137 GDTYAWAFKATSDVVKL 153
              D YAWAF+A S+V ++
Sbjct:   143 WDLYAWAFQAESNVAEI 159


>TAIR|locus:2016324 [details] [associations]
            symbol:DGR1 "AT1G80240" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009505 "plant-type cell
            wall" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0009505 InterPro:IPR008979 SUPFAM:SSF49785 EMBL:AC009322
            HOGENOM:HOG000231422 ProtClustDB:PLN03089 InterPro:IPR006946
            Pfam:PF04862 UniGene:At.21525 EMBL:BT032869 IPI:IPI00520709
            PIR:A96834 RefSeq:NP_178141.1 UniGene:At.48401
            ProteinModelPortal:Q9SSB7 PaxDb:Q9SSB7 PRIDE:Q9SSB7
            EnsemblPlants:AT1G80240.1 GeneID:844364 KEGG:ath:AT1G80240
            TAIR:At1g80240 eggNOG:NOG323718 OMA:FHNPGVE PhylomeDB:Q9SSB7
            Genevestigator:Q9SSB7 Uniprot:Q9SSB7
        Length = 370

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 64/135 (47%), Positives = 86/135 (63%)

Query:    19 DTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPRDVHA 78
             D LLPNGNFEL PK S +   V+ E+ ++P W I G VE+I  G +       VP+   A
Sbjct:    27 DGLLPNGNFELGPKPSQMKGSVVKERTAVPNWNIIGFVEFIKSGQKQDDMVLVVPQGSSA 86

Query:    79 VRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSDLPIQTLYSINGGD 138
             VRLG EASIS+ + V  G +YS+TF   RTCAQDE L + V  +S  +PIQT+Y  +G D
Sbjct:    87 VRLGNEASISQKISVLPGRLYSITFSAARTCAQDERLNISVTHESGVIPIQTMYGSDGWD 146

Query:   139 TYAWAFKATSDVVKL 153
             +Y+WAFKA    +++
Sbjct:   147 SYSWAFKAGGPEIEI 161


>TAIR|locus:2062321 [details] [associations]
            symbol:AT2G34510 "AT2G34510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0031225 "anchored to
            membrane" evidence=TAS] EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0031225 InterPro:IPR008979 SUPFAM:SSF49785 EMBL:AC004077
            HOGENOM:HOG000231422 ProtClustDB:PLN03089 InterPro:IPR006946
            Pfam:PF04862 EMBL:AF325081 IPI:IPI00532804 PIR:E84757
            RefSeq:NP_180998.1 UniGene:At.19519 ProteinModelPortal:O64696
            PaxDb:O64696 PRIDE:O64696 EnsemblPlants:AT2G34510.1 GeneID:818014
            KEGG:ath:AT2G34510 TAIR:At2g34510 eggNOG:NOG259927
            InParanoid:O64696 OMA:SEYAITF PhylomeDB:O64696 ArrayExpress:O64696
            Genevestigator:O64696 Uniprot:O64696
        Length = 401

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 62/140 (44%), Positives = 81/140 (57%)

Query:    19 DTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPRDVHA 78
             D L+ NG+FE  P     +  +I +   +P W   G VE I  G + GG    VP   HA
Sbjct:    38 DGLVVNGDFETPPSNGFPDDAIIEDTSEIPSWRSDGTVELIKSGQKQGGMILIVPEGRHA 97

Query:    79 VRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLV-----PGQSSDLPIQTLYS 133
             VRLG +A IS+ + V++GSIYS+TF   RTCAQ E L V V     P  S  + +QT+YS
Sbjct:    98 VRLGNDAEISQELTVEKGSIYSVTFSAARTCAQLESLNVSVASSDEPIASQTIDLQTVYS 157

Query:   134 INGGDTYAWAFKATSDVVKL 153
             + G D YAWAF+A  D V+L
Sbjct:   158 VQGWDPYAWAFEAVVDRVRL 177


>TAIR|locus:2198279 [details] [associations]
            symbol:AT1G29980 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0031225 "anchored to membrane" evidence=TAS]
            [GO:0005886 "plasma membrane" evidence=IDA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0031225
            InterPro:IPR008979 SUPFAM:SSF49785 EMBL:AC022455
            HOGENOM:HOG000231422 ProtClustDB:PLN03089 InterPro:IPR006946
            Pfam:PF04862 IPI:IPI00546022 PIR:F86423 RefSeq:NP_564344.1
            UniGene:At.17979 ProteinModelPortal:Q9C8S1 STRING:Q9C8S1
            PRIDE:Q9C8S1 EnsemblPlants:AT1G29980.1 GeneID:839877
            KEGG:ath:AT1G29980 TAIR:At1g29980 InParanoid:Q9C8S1 OMA:MVETKAD
            PhylomeDB:Q9C8S1 Genevestigator:Q9C8S1 Uniprot:Q9C8S1
        Length = 407

 Score = 274 (101.5 bits), Expect = 7.1e-24, P = 7.1e-24
 Identities = 61/148 (41%), Positives = 86/148 (58%)

Query:    15 PRYLDTLLPNGNFELSPKKSNLNKKVILEKYSLPKWEISGLVEYISGGPQPGGFYFTVPR 74
             P   D L+ NG+FE SP     +  V      +P W+ +G VE I+ G + GG    VP+
Sbjct:    34 PAVEDGLVINGDFETSPSSGFPDDGVTDGPSDIPSWKSNGTVELINSGQKQGGMILIVPQ 93

Query:    75 DVHAVRLGYEASISRNVRVKRGSIYSLTFGTTRTCAQDEVLRVLVPGQSSD--------- 125
               HAVRLG +A IS+++ V++G +YS+TF   RTCAQ E + V V   ++D         
Sbjct:    94 GRHAVRLGNDAEISQDLTVEKGFVYSVTFSAARTCAQLESINVSVASVNADADDMLASRN 153

Query:   126 LPIQTLYSINGGDTYAWAFKATSDVVKL 153
             + +QTLYS+ G D YAWAF+A  D V+L
Sbjct:   154 VDLQTLYSVQGWDPYAWAFEAEDDHVRL 181


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      216       204   0.00094  111 3  11 22  0.36    33
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  166 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.76u 0.11s 15.87t   Elapsed:  00:00:01
  Total cpu time:  15.76u 0.11s 15.87t   Elapsed:  00:00:01
  Start:  Fri May 10 09:02:42 2013   End:  Fri May 10 09:02:43 2013

Back to top