BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045875
         (216 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3I2X|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
           Rea Loop Of Eti On The Scaffold Of Wci
 pdb|3I2X|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
           Rea Loop Of Eti On The Scaffold Of Wci
          Length = 187

 Score = 28.9 bits (63), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 45  YSLPK-WEISGLVEYISGGPQPGGFYFTVPRDVHAVRLGYEASISRNVR---VKRGSIYS 100
           Y LP  W   G +E    G +P     TV R  + V  G    IS  +R   + RGS+ +
Sbjct: 23  YLLPHIWAHGGGIETAKTGNEP--CPLTVVRSPNEVSKGEPIRISSRLRSAFIPRGSLVA 80

Query: 101 LTFGTTRTCA 110
           L F    +CA
Sbjct: 81  LGFANPPSCA 90


>pdb|1XG6|A Chain A, The Crystal Structure Of The P1 Mutant (Leu To Arg)of A
           Winged Bean Chymotrypsin Inhibitor(Kunitz)solved At
           2.15a Resolution
          Length = 187

 Score = 28.1 bits (61), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 45  YSLPK-WEISGLVEYISGGPQPGGFYFTVPRDVHAVRLGYEASIS---RNVRVKRGSIYS 100
           Y LP  W   G +E    G +P     TV R  + V  G    IS   R++ + RGS+ +
Sbjct: 23  YLLPHIWAHGGGIETAKTGNEP--CPLTVVRSPNEVSKGEPIRISSQFRSLFIPRGSLVA 80

Query: 101 LTFGTTRTCA 110
           L F    +CA
Sbjct: 81  LGFANPPSCA 90


>pdb|2QYI|B Chain B, Crystal Structure Of A Binary Complex Between An
           Engineered Trypsin Inhibitor And Bovine Trypsin
 pdb|2QYI|D Chain D, Crystal Structure Of A Binary Complex Between An
           Engineered Trypsin Inhibitor And Bovine Trypsin
 pdb|3VEQ|A Chain A, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A
           Engineered Mutant Trypsin Inhibitor
          Length = 183

 Score = 28.1 bits (61), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 45  YSLPK-WEISGLVEYISGGPQPGGFYFTVPRDVHAVRLGYEASIS---RNVRVKRGSIYS 100
           Y LP  W   G +E    G +P     TV R  + V  G    IS   R++ + RGS+ +
Sbjct: 19  YLLPHIWAHGGGIETAKTGNEP--CPLTVVRSPNEVSKGEPIRISSQFRSLFIPRGSLVA 76

Query: 101 LTFGTTRTCA 110
           L F    +CA
Sbjct: 77  LGFANPPSCA 86


>pdb|3I29|B Chain B, Crystal Structure Of A Binary Complex Between An Mutant
           Tryp Inhibitor With Bovine Trypsin
          Length = 187

 Score = 28.1 bits (61), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 45  YSLPK-WEISGLVEYISGGPQPGGFYFTVPRDVHAVRLGYEASIS---RNVRVKRGSIYS 100
           Y LP  W   G +E    G +P     TV R  + V  G    IS   R++ + RGS+ +
Sbjct: 23  YLLPHIWAHGGGIETAKTGNEP--CPLTVVRSPNEVSKGEPIRISSQYRSLFIPRGSLVA 80

Query: 101 LTFGTTRTCA 110
           L F    +CA
Sbjct: 81  LGFANPPSCA 90


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.318    0.134    0.394 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,222,756
Number of Sequences: 62578
Number of extensions: 241147
Number of successful extensions: 526
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 526
Number of HSP's gapped (non-prelim): 4
length of query: 216
length of database: 14,973,337
effective HSP length: 95
effective length of query: 121
effective length of database: 9,028,427
effective search space: 1092439667
effective search space used: 1092439667
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)