BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045880
MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTDVFENHQPSSLIPGATLQMQYEIKWY
KEHFTKTHKKLGKRGSKWLIKTSKACFVFAMLIANVAFAASTTVSGVLNEDYGRPILLEE
IAFHIFAISLLVYLCFLGTTLI

High Scoring Gene Products

Symbol, full name Information P value
AT5G04700 protein from Arabidopsis thaliana 1.2e-11
AT5G35810 protein from Arabidopsis thaliana 1.5e-11
AT5G04690 protein from Arabidopsis thaliana 2.2e-11
AT5G04730 protein from Arabidopsis thaliana 4.5e-10
AT3G54070 protein from Arabidopsis thaliana 1.1e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045880
        (142 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2175413 - symbol:AT5G04700 "AT5G04700" species...   126  1.2e-11   2
TAIR|locus:2165174 - symbol:AT5G35810 "AT5G35810" species...   119  1.5e-11   2
TAIR|locus:2180228 - symbol:AT5G04690 "AT5G04690" species...   116  2.2e-11   2
TAIR|locus:2175448 - symbol:AT5G04730 "AT5G04730" species...   115  4.5e-10   2
TAIR|locus:2080240 - symbol:AT3G54070 "AT3G54070" species...   116  1.1e-08   2


>TAIR|locus:2175413 [details] [associations]
            symbol:AT5G04700 "AT5G04700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002110 SMART:SM00248 EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:1.25.40.20 InterPro:IPR020683
            Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AL162972
            EMBL:AB008271 InterPro:IPR026961 Pfam:PF13962 HOGENOM:HOG000006249
            IPI:IPI00524008 PIR:T48466 RefSeq:NP_196090.1 UniGene:At.54722
            UniGene:At.75062 ProteinModelPortal:Q9LZ27 SMR:Q9LZ27 PaxDb:Q9LZ27
            PRIDE:Q9LZ27 EnsemblPlants:AT5G04700.1 GeneID:830348
            KEGG:ath:AT5G04700 TAIR:At5g04700 eggNOG:NOG255886
            InParanoid:Q9LZ27 OMA:SVDEWIN PhylomeDB:Q9LZ27
            ProtClustDB:CLSN2686430 Genevestigator:Q9LZ27 Uniprot:Q9LZ27
        Length = 669

 Score = 126 (49.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 31/82 (37%), Positives = 45/82 (54%)

Query:    62 EHFTKTHKKLGKRGSKWLIKTSKACFVFAMLIANVAFAASTTVSGVLNEDY-GRPILLEE 120
             E FTK H+ L +   KW+  T+ +C + A LI  V FAA  TV G  +++  G+P  L +
Sbjct:   488 EIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGKPFHLRD 547

Query:   121 IAFHIFAISLLVYLCFLGTTLI 142
               F IF +S L+  CF   T +
Sbjct:   548 RRFIIFIVSDLIS-CFASCTSV 568

 Score = 67 (28.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query:     3 VIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTDVFENHQPSSL--IPGATLQMQYEIKWY 60
             V  ++  + D   + + ++D +G  ++ LA    F +  PS L  + GA LQ+Q E++W+
Sbjct:   409 VFSLLYGLDDRKYLLLADKDCDGNGVLHLAG---FPS-PPSKLSSVVGAPLQLQRELQWF 464

Query:    61 KE 62
             KE
Sbjct:   465 KE 466


>TAIR|locus:2165174 [details] [associations]
            symbol:AT5G35810 "AT5G35810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR Gene3D:1.25.40.20 InterPro:IPR020683
            SUPFAM:SSF48403 EMBL:AB005236 InterPro:IPR026961 Pfam:PF13962
            IPI:IPI00535093 RefSeq:NP_198430.1 UniGene:At.55144
            ProteinModelPortal:Q9FFM1 SMR:Q9FFM1 EnsemblPlants:AT5G35810.1
            GeneID:833567 KEGG:ath:AT5G35810 TAIR:At5g35810 eggNOG:NOG276731
            HOGENOM:HOG000006249 InParanoid:Q9FFM1 OMA:IAAINRH PhylomeDB:Q9FFM1
            ProtClustDB:CLSN2916298 Genevestigator:Q9FFM1 Uniprot:Q9FFM1
        Length = 347

 Score = 119 (46.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
 Identities = 31/84 (36%), Positives = 45/84 (53%)

Query:    64 FTKTHKKLGKRGSKWLIKTSKACFVFAMLIANVAFAASTTVSGVLN-----EDYGRPILL 118
             FTK H  L K G KW+ +T+ AC + + LIA V FAA+ T+ G  +     +  G P   
Sbjct:   162 FTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAAAFTLPGGNDTSGDIKTLGFPTFR 221

Query:   119 EEIAFHIFAISLLVYLCFLGTTLI 142
             +E  F +F IS  V L    T+++
Sbjct:   222 KEFWFEVFIISDSVALLSSVTSIM 245

 Score = 65 (27.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
 Identities = 19/49 (38%), Positives = 27/49 (55%)

Query:    15 LVAIQEEDTNGKNIVLLAYTDVFENHQPSSL--IPGATLQMQYEIKWYK 61
             L+A+ +E  +  N++ L    V     P+ L  + GA LQMQ EI WYK
Sbjct:    93 LIAMYKEKESNDNLLHL----VARLPPPNRLQVVSGAALQMQREILWYK 137


>TAIR|locus:2180228 [details] [associations]
            symbol:AT5G04690 "AT5G04690" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002110 SMART:SM00248 EMBL:CP002688
            Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
            PROSITE:PS50297 EMBL:AL162972 InterPro:IPR026961 Pfam:PF13962
            eggNOG:KOG0504 HOGENOM:HOG000006249 ProtClustDB:CLSN2686430
            IPI:IPI00544881 PIR:T48465 RefSeq:NP_196089.1 UniGene:At.33085
            ProteinModelPortal:Q9LZ28 SMR:Q9LZ28 PRIDE:Q9LZ28
            EnsemblPlants:AT5G04690.1 GeneID:830347 KEGG:ath:AT5G04690
            TAIR:At5g04690 InParanoid:Q9LZ28 OMA:PAIENER PhylomeDB:Q9LZ28
            Genevestigator:Q9LZ28 Uniprot:Q9LZ28
        Length = 625

 Score = 116 (45.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
 Identities = 30/82 (36%), Positives = 42/82 (51%)

Query:    62 EHFTKTHKKLGKRGSKWLIKTSKACFVFAMLIANVAFAASTTVSGVLNEDYG-RPILLEE 120
             E F K H+ +     KW+  T+ +C + A LI  V FAA  TV G  +++ G RP    E
Sbjct:   446 EIFRKEHEAMRLEAEKWMKDTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGRPFHRHE 505

Query:   121 IAFHIFAISLLVYLCFLGTTLI 142
               F IF +S L+  CF   T +
Sbjct:   506 RIFVIFIVSDLIS-CFAACTSV 526

 Score = 74 (31.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
 Identities = 18/61 (29%), Positives = 39/61 (63%)

Query:     3 VIEIVEKILDAFLVAIQEEDTNGKNIVLLA-YTDVFENHQPSSLIPGATLQMQYEIKWYK 61
             V  ++  + D   + + ++D++G +++ LA Y     N++ ++++  ATLQMQ E++W+K
Sbjct:   367 VFSLLYGLGDRKYLFLADKDSDGNSVLHLAGYPP--PNYKLATVV-SATLQMQRELQWFK 423

Query:    62 E 62
             E
Sbjct:   424 E 424


>TAIR|locus:2175448 [details] [associations]
            symbol:AT5G04730 "AT5G04730" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 InterPro:IPR026961 Pfam:PF13962
            IPI:IPI00517884 RefSeq:NP_196093.2 UniGene:At.65487
            ProteinModelPortal:F4JXP4 SMR:F4JXP4 PRIDE:F4JXP4
            EnsemblPlants:AT5G04730.1 GeneID:830351 KEGG:ath:AT5G04730
            OMA:EMISSTY ArrayExpress:F4JXP4 Uniprot:F4JXP4
        Length = 603

 Score = 115 (45.5 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
 Identities = 26/76 (34%), Positives = 40/76 (52%)

Query:    51 LQMQYEIKWYKEHFTKTHKKLGKRGSKWLIKTSKACFVFAMLIANVAFAASTTVSGVLNE 110
             +Q   + K  ++ F   H+ L K G +W+  T+ AC   A LIA V F A  TV G ++ 
Sbjct:   412 VQKNKDNKTPRQIFEHYHEHLRKEGEEWMKYTATACSFVAALIATVTFQAIFTVPGGIDG 471

Query:   111 DYGRPILLEEIAFHIF 126
               G P++L ++ F  F
Sbjct:   472 TSGSPLILNDLHFRAF 487

 Score = 62 (26.9 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
 Identities = 16/60 (26%), Positives = 28/60 (46%)

Query:     3 VIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTDVFENHQPSSLIPGATLQMQYEIKWYKE 62
             +  ++  + D  +  ++  D    NI+ +A           S I GA L+MQ E +W+KE
Sbjct:   344 IFNLIHGLDDRKVTLLRSYDKGNNNILHIAGR--LSTPDQLSKISGAALKMQRESQWFKE 401


>TAIR|locus:2080240 [details] [associations]
            symbol:AT3G54070 "AT3G54070" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:1.25.40.20 InterPro:IPR020683
            Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AL132957
            InterPro:IPR026961 Pfam:PF13962 IPI:IPI00517411 PIR:T47566
            RefSeq:NP_190975.1 UniGene:At.53927 ProteinModelPortal:Q9M396
            SMR:Q9M396 PRIDE:Q9M396 EnsemblPlants:AT3G54070.1 GeneID:824574
            KEGG:ath:AT3G54070 TAIR:At3g54070 eggNOG:NOG298222
            HOGENOM:HOG000153245 InParanoid:Q9M396 OMA:QSRSIFH PhylomeDB:Q9M396
            ProtClustDB:CLSN2915638 Genevestigator:Q9M396 Uniprot:Q9M396
        Length = 574

 Score = 116 (45.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 28/73 (38%), Positives = 41/73 (56%)

Query:    64 FTKTHKKLGKRGSKWLIKTSKACFVFAMLIANVAFAASTTVSGVLNEDYGR-------PI 116
             FT+ H+ L K G +W+ +T+ AC + A LIA V FAA+ T+ G  N+D G        P 
Sbjct:   386 FTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIPGG-NDDSGDKANTLGFPN 444

Query:   117 LLEEIAFHIFAIS 129
               + + F IF +S
Sbjct:   445 FRKRLLFDIFTLS 457

 Score = 47 (21.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query:    15 LVAIQEEDTNGKNIVLLAYTDVFENHQPSSLIPGATLQMQYEIKWYK 61
             + + +E+ +    + L+A        Q  S   GA L MQ E+ W+K
Sbjct:   318 IASYKEKQSKDTLLHLVARLPPMNRQQVGS---GAALHMQKELLWFK 361


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      142       142   0.00091  102 3  11 22  0.39    31
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  139 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.37u 0.16s 13.53t   Elapsed:  00:00:01
  Total cpu time:  13.37u 0.16s 13.53t   Elapsed:  00:00:01
  Start:  Fri May 10 09:12:59 2013   End:  Fri May 10 09:13:00 2013

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