BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045880
         (142 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana
           GN=At3g12360 PE=2 SV=1
          Length = 590

 Score = 33.1 bits (74), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 38  ENHQPSSLIPGATLQMQYEIKWYKEHFTKTHK-------KLGKRGSKWLIKTSKACFVFA 90
           E +QP   +     Q++ ++    E   +T+K       +L K   + +   + +  V A
Sbjct: 367 ELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINNATNSVTVVA 426

Query: 91  MLIANVAFAASTTVSGVLNEDYGRPILLEEIAFHIFAI 128
           +L A VAFAA  TV G  N D G  +++   +F IF I
Sbjct: 427 VLFATVAFAAIFTVPGGDNND-GSAVVVGRASFKIFFI 463


>sp|Q09700|YA29_SCHPO Uncharacterized protein C2F7.09c OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPAC2F7.09c PE=4 SV=1
          Length = 491

 Score = 30.4 bits (67), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 3   VIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTDVFENHQPSSLIPGATLQMQYEIKWYKE 62
           VI++ E I   F+ A Q   T+     L  + DV    +P  L PG  +  +Y + +   
Sbjct: 133 VIDVTEVIFQDFVSATQY--THFPVFHLFTHADVLPPKKPYWLFPGLGISSKYAMLYTSH 190

Query: 63  HFTKTHKKLGK 73
            F    K LG+
Sbjct: 191 SFNLVDKLLGR 201


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.138    0.406 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,615,215
Number of Sequences: 539616
Number of extensions: 1772975
Number of successful extensions: 5197
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5197
Number of HSP's gapped (non-prelim): 4
length of query: 142
length of database: 191,569,459
effective HSP length: 105
effective length of query: 37
effective length of database: 134,909,779
effective search space: 4991661823
effective search space used: 4991661823
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)