Query 045880
Match_columns 142
No_of_seqs 143 out of 476
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 06:26:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045880.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045880hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13962 PGG: Domain of unknow 99.9 5.7E-23 1.2E-27 149.0 6.2 67 76-142 1-71 (113)
2 PF13637 Ank_4: Ankyrin repeat 97.7 5.1E-05 1.1E-09 47.3 3.3 33 1-34 11-43 (54)
3 PF13857 Ank_5: Ankyrin repeat 97.3 0.00024 5.1E-09 45.0 2.6 31 1-32 26-56 (56)
4 PF12796 Ank_2: Ankyrin repeat 96.7 0.0018 3.9E-08 43.2 3.4 28 1-33 7-34 (89)
5 PHA02876 ankyrin repeat protei 96.5 0.00094 2E-08 60.6 0.8 33 1-33 51-83 (682)
6 PF13857 Ank_5: Ankyrin repeat 96.2 0.0028 6E-08 40.0 1.5 26 10-35 1-26 (56)
7 KOG4412 26S proteasome regulat 95.1 0.013 2.9E-07 47.3 2.0 31 2-33 83-114 (226)
8 PHA02741 hypothetical protein; 94.7 0.03 6.5E-07 42.2 3.1 34 1-34 31-69 (169)
9 KOG0515 p53-interacting protei 94.6 0.023 4.9E-07 52.1 2.4 31 2-33 594-624 (752)
10 KOG4412 26S proteasome regulat 94.5 0.027 5.9E-07 45.5 2.4 31 2-33 49-80 (226)
11 PF12796 Ank_2: Ankyrin repeat 93.9 0.072 1.6E-06 35.3 3.3 33 1-34 36-68 (89)
12 PHA02741 hypothetical protein; 93.9 0.057 1.2E-06 40.7 3.1 29 4-33 77-106 (169)
13 PHA02736 Viral ankyrin protein 93.7 0.064 1.4E-06 39.4 2.9 29 4-33 71-100 (154)
14 PHA02743 Viral ankyrin protein 93.4 0.083 1.8E-06 39.9 3.1 29 4-33 73-102 (166)
15 COG0666 Arp FOG: Ankyrin repea 93.3 0.095 2.1E-06 38.3 3.2 33 2-34 122-156 (235)
16 PHA02874 ankyrin repeat protei 93.1 0.088 1.9E-06 45.1 3.2 34 1-34 11-44 (434)
17 PLN03192 Voltage-dependent pot 92.6 0.1 2.2E-06 49.0 3.1 33 1-34 535-567 (823)
18 PHA02875 ankyrin repeat protei 92.6 0.12 2.6E-06 43.7 3.2 32 2-33 79-110 (413)
19 PHA02878 ankyrin repeat protei 92.5 0.11 2.5E-06 45.0 3.2 33 1-34 47-79 (477)
20 PHA02878 ankyrin repeat protei 92.4 0.13 2.9E-06 44.6 3.5 32 2-34 179-210 (477)
21 PHA02743 Viral ankyrin protein 92.4 0.14 3E-06 38.7 3.1 33 2-34 31-66 (166)
22 PHA02946 ankyin-like protein; 92.4 0.12 2.6E-06 45.3 3.2 31 3-34 51-81 (446)
23 cd00204 ANK ankyrin repeats; 92.4 0.16 3.6E-06 33.8 3.2 33 1-34 17-49 (126)
24 PHA02859 ankyrin repeat protei 91.9 0.18 3.8E-06 39.5 3.3 32 2-33 64-95 (209)
25 PHA02791 ankyrin-like protein; 91.7 0.17 3.7E-06 42.1 3.2 33 1-34 71-103 (284)
26 PHA02859 ankyrin repeat protei 91.6 0.19 4.2E-06 39.3 3.2 32 2-34 101-132 (209)
27 PHA02875 ankyrin repeat protei 91.5 0.18 3.9E-06 42.6 3.2 31 2-33 146-176 (413)
28 PHA03100 ankyrin repeat protei 91.4 0.17 3.7E-06 43.4 2.9 31 2-33 84-114 (480)
29 PLN03192 Voltage-dependent pot 91.4 0.16 3.5E-06 47.7 2.9 33 1-34 632-664 (823)
30 PHA02946 ankyin-like protein; 91.3 0.18 3.9E-06 44.2 3.1 32 1-33 82-113 (446)
31 PF13606 Ank_3: Ankyrin repeat 91.1 0.15 3.2E-06 28.6 1.5 12 24-35 1-12 (30)
32 PHA02874 ankyrin repeat protei 90.9 0.23 4.9E-06 42.6 3.2 33 1-34 134-166 (434)
33 PHA02716 CPXV016; CPX019; EVM0 90.5 0.24 5.2E-06 46.9 3.2 32 1-33 294-325 (764)
34 PHA02795 ankyrin-like protein; 90.4 0.26 5.7E-06 43.8 3.2 31 2-33 199-229 (437)
35 PHA02791 ankyrin-like protein; 90.3 0.27 5.8E-06 40.9 3.0 29 2-33 139-168 (284)
36 KOG0195 Integrin-linked kinase 89.9 0.24 5.2E-06 42.8 2.5 32 1-33 77-108 (448)
37 PHA02736 Viral ankyrin protein 89.8 0.41 8.8E-06 35.1 3.4 24 10-33 40-63 (154)
38 PF00023 Ank: Ankyrin repeat H 89.5 0.2 4.3E-06 28.0 1.1 11 24-34 1-11 (33)
39 cd00204 ANK ankyrin repeats; 89.2 0.48 1E-05 31.5 3.2 33 2-35 51-83 (126)
40 PHA02798 ankyrin-like protein; 88.7 0.37 8E-06 42.2 2.9 31 2-33 87-117 (489)
41 PTZ00322 6-phosphofructo-2-kin 88.3 0.44 9.6E-06 44.0 3.2 31 2-33 126-156 (664)
42 PHA02989 ankyrin repeat protei 88.2 0.47 1E-05 41.5 3.2 32 2-33 122-153 (494)
43 PHA02798 ankyrin-like protein; 88.1 0.51 1.1E-05 41.3 3.3 29 3-33 238-266 (489)
44 PHA03100 ankyrin repeat protei 88.1 0.54 1.2E-05 40.3 3.4 30 4-34 230-259 (480)
45 PHA03095 ankyrin-like protein; 88.1 0.52 1.1E-05 40.2 3.3 30 3-33 62-91 (471)
46 PHA02795 ankyrin-like protein; 87.6 0.57 1.2E-05 41.8 3.3 33 1-34 231-263 (437)
47 PHA02716 CPXV016; CPX019; EVM0 86.4 0.63 1.4E-05 44.1 3.1 32 2-34 190-221 (764)
48 PTZ00322 6-phosphofructo-2-kin 85.9 0.73 1.6E-05 42.6 3.2 32 1-33 92-123 (664)
49 PHA02989 ankyrin repeat protei 85.8 0.75 1.6E-05 40.3 3.1 31 2-33 86-116 (494)
50 PHA02876 ankyrin repeat protei 85.6 0.78 1.7E-05 41.8 3.2 32 2-34 156-187 (682)
51 KOG0514 Ankyrin repeat protein 85.3 0.73 1.6E-05 40.8 2.7 33 1-34 383-416 (452)
52 PHA02730 ankyrin-like protein; 84.4 0.91 2E-05 42.5 3.1 32 2-34 55-86 (672)
53 PHA02884 ankyrin repeat protei 84.4 1 2.2E-05 38.0 3.2 34 1-34 43-79 (300)
54 TIGR00870 trp transient-recept 84.4 0.59 1.3E-05 43.1 1.9 31 2-33 186-216 (743)
55 KOG0512 Fetal globin-inducing 84.0 1.1 2.3E-05 36.3 2.9 32 2-33 74-105 (228)
56 KOG4177 Ankyrin [Cell wall/mem 83.9 0.73 1.6E-05 45.5 2.3 33 1-34 550-582 (1143)
57 KOG0782 Predicted diacylglycer 83.0 0.61 1.3E-05 43.5 1.4 32 2-33 910-942 (1004)
58 KOG0510 Ankyrin repeat protein 83.0 1.1 2.4E-05 43.0 3.0 34 1-34 351-386 (929)
59 PHA03095 ankyrin-like protein; 82.4 1.4 3E-05 37.6 3.3 30 3-33 166-195 (471)
60 PHA02917 ankyrin-like protein; 81.5 1.4 3.1E-05 40.8 3.2 32 2-34 207-238 (661)
61 PHA02884 ankyrin repeat protei 80.4 1.8 4E-05 36.5 3.2 32 2-33 81-112 (300)
62 KOG0514 Ankyrin repeat protein 80.1 1.6 3.5E-05 38.7 2.8 34 1-35 350-383 (452)
63 PHA02917 ankyrin-like protein; 80.0 1.7 3.7E-05 40.3 3.1 32 2-34 430-461 (661)
64 KOG0512 Fetal globin-inducing 79.9 1.4 3E-05 35.7 2.2 33 1-34 107-139 (228)
65 KOG3676 Ca2+-permeable cation 79.8 1.4 3E-05 42.0 2.5 33 2-34 157-193 (782)
66 KOG0509 Ankyrin repeat and DHH 78.7 1.9 4.1E-05 39.9 3.0 33 1-34 122-154 (600)
67 COG0666 Arp FOG: Ankyrin repea 77.9 2.7 5.9E-05 30.5 3.2 31 2-33 84-114 (235)
68 KOG3676 Ca2+-permeable cation 77.4 2.4 5.2E-05 40.4 3.3 33 2-35 251-283 (782)
69 KOG0509 Ankyrin repeat and DHH 74.1 2.6 5.7E-05 39.0 2.6 29 5-33 192-220 (600)
70 TIGR00870 trp transient-recept 73.7 2.5 5.4E-05 39.0 2.4 29 2-30 28-57 (743)
71 PHA02792 ankyrin-like protein; 73.1 3.4 7.3E-05 38.6 3.1 33 1-33 116-183 (631)
72 KOG0502 Integral membrane anky 70.2 2.2 4.8E-05 35.7 1.1 34 1-34 72-105 (296)
73 PHA02730 ankyrin-like protein; 70.0 4.1 8.9E-05 38.3 2.9 29 5-34 443-471 (672)
74 KOG0502 Integral membrane anky 69.9 2 4.3E-05 35.9 0.8 32 2-34 204-235 (296)
75 KOG0508 Ankyrin repeat protein 69.1 4.5 9.8E-05 37.1 2.9 31 1-33 193-223 (615)
76 KOG0508 Ankyrin repeat protein 65.3 5.7 0.00012 36.4 2.8 33 1-34 160-192 (615)
77 PHA02792 ankyrin-like protein; 64.1 6.9 0.00015 36.6 3.2 28 5-33 391-418 (631)
78 KOG0505 Myosin phosphatase, re 61.3 6.5 0.00014 36.0 2.4 32 1-33 208-239 (527)
79 KOG4214 Myotrophin and similar 59.2 7.2 0.00016 28.6 1.9 32 1-34 12-43 (117)
80 KOG4177 Ankyrin [Cell wall/mem 57.6 10 0.00022 37.9 3.1 34 1-35 583-616 (1143)
81 PF07954 DUF1689: Protein of u 56.9 40 0.00086 26.1 5.8 68 63-131 6-78 (152)
82 KOG0520 Uncharacterized conser 56.6 1.5 3.2E-05 42.7 -2.6 32 2-33 618-649 (975)
83 KOG0510 Ankyrin repeat protein 55.2 9 0.0002 37.1 2.3 32 2-34 317-350 (929)
84 TIGR01569 A_tha_TIGR01569 plan 51.3 27 0.00058 26.6 4.0 54 86-141 6-62 (154)
85 KOG0505 Myosin phosphatase, re 46.5 13 0.00028 34.1 1.8 31 2-33 84-114 (527)
86 KOG1710 MYND Zn-finger and ank 46.3 22 0.00048 30.9 3.1 33 1-33 55-87 (396)
87 PF05055 DUF677: Protein of un 44.9 67 0.0014 27.8 5.9 12 97-108 211-222 (336)
88 KOG0507 CASK-interacting adapt 41.7 17 0.00036 35.0 1.8 32 1-33 59-90 (854)
89 smart00248 ANK ankyrin repeats 39.6 27 0.00059 16.1 1.8 16 1-16 12-27 (30)
90 KOG0522 Ankyrin repeat protein 37.7 26 0.00057 32.3 2.4 27 7-33 37-63 (560)
91 PF13493 DUF4118: Domain of un 35.2 94 0.002 21.0 4.5 54 83-139 45-98 (105)
92 KOG0521 Putative GTPase activa 34.7 27 0.00058 33.5 2.1 32 2-34 667-698 (785)
93 KOG0507 CASK-interacting adapt 32.9 15 0.00033 35.3 0.1 34 1-35 92-125 (854)
94 KOG0522 Ankyrin repeat protein 30.8 47 0.001 30.7 2.9 31 2-33 66-96 (560)
95 PRK09917 hypothetical protein; 30.6 41 0.00089 25.8 2.2 21 88-108 14-34 (157)
96 PF13033 DUF3894: Protein of u 29.5 43 0.00094 21.3 1.8 22 121-142 31-52 (54)
97 PF08984 DUF1858: Domain of un 25.8 33 0.00071 21.7 0.8 23 7-29 7-29 (59)
98 PF00989 PAS: PAS fold; Inter 23.7 68 0.0015 20.6 2.0 23 5-27 1-23 (113)
99 TIGR02184 Myco_arth_vir_N Myco 22.3 39 0.00085 19.8 0.5 22 80-101 8-29 (33)
100 KOG0705 GTPase-activating prot 22.3 72 0.0016 30.2 2.5 31 2-33 672-702 (749)
101 PF04224 DUF417: Protein of un 22.3 3.3E+02 0.0071 21.6 5.9 41 96-139 124-165 (175)
102 PF09292 Neil1-DNA_bind: Endon 22.2 38 0.00083 20.5 0.5 14 15-28 15-28 (39)
103 KOG0783 Uncharacterized conser 21.3 21 0.00045 35.2 -1.2 27 7-33 34-60 (1267)
104 KOG0195 Integrin-linked kinase 20.9 87 0.0019 27.4 2.6 32 2-34 45-76 (448)
105 PF13475 DUF4116: Domain of un 20.7 61 0.0013 18.9 1.2 31 4-34 2-35 (49)
No 1
>PF13962 PGG: Domain of unknown function
Probab=99.88 E-value=5.7e-23 Score=149.02 Aligned_cols=67 Identities=36% Similarity=0.462 Sum_probs=62.2
Q ss_pred hHHHHhhhhhhHHHHHHHHHHHHHhhhccCCcccCC---CCcccccccc-hhhHHHHHHHHHHHHHhhhcC
Q 045880 76 SKWLIKTSKACFVFAMLIANVAFAASTTVSGVLNED---YGRPILLEEI-AFHIFAISLLVYLCFLGTTLI 142 (142)
Q Consensus 76 ~~~~k~~~~s~~vvA~LIATvtFaAaftvPGG~~~~---~G~~~l~~~~-~F~~F~i~~~~a~~~S~~av~ 142 (142)
+||+++++|+++|||+|||||||+|+||+||||+++ .|+|++.+++ .|++|+++|++||++|+++++
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~ 71 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIF 71 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999654 7999998888 999999999999999998763
No 2
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.67 E-value=5.1e-05 Score=47.33 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=24.7
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+.|+++.|+++..| +..+|.+|+|+||+|+.
T Consensus 11 ~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~ 43 (54)
T PF13637_consen 11 SGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAK 43 (54)
T ss_dssp TT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHH
T ss_pred hCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 5899999999999888 55559999999999994
No 3
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=97.26 E-value=0.00024 Score=45.03 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=19.9
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLA 32 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvA 32 (142)
+|+.|+|+.|+ ..+.-+..+|++|+|+||+|
T Consensus 26 ~g~~~~v~~Ll-~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 26 YGHSEVVRLLL-QNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp HT-HHHHHHHH-HCT--TT---TTS--HHHH-
T ss_pred cCcHHHHHHHH-HCcCCCCCCcCCCCCHHHhC
Confidence 48999999999 77888999999999999998
No 4
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=96.73 E-value=0.0018 Score=43.18 Aligned_cols=28 Identities=21% Similarity=0.170 Sum_probs=17.9
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|+.++++.|++..++.-. |+|+||+|+
T Consensus 7 ~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~ 34 (89)
T PF12796_consen 7 NGNLEILKFLLEKGADINL-----GNTALHYAA 34 (89)
T ss_dssp TTTHHHHHHHHHTTSTTTS-----SSBHHHHHH
T ss_pred cCCHHHHHHHHHCcCCCCC-----CCCHHHHHH
Confidence 4667777777776554433 667777777
No 5
>PHA02876 ankyrin repeat protein; Provisional
Probab=96.47 E-value=0.00094 Score=60.55 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=31.1
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
.|++|+|++|++.||++....|.+|+|+||+|.
T Consensus 51 ~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~ 83 (682)
T PHA02876 51 LRQIDIVEEIIQQNPELIYITDHKCHSTLHTIC 83 (682)
T ss_pred HHhhhHHHHHHHhCcccchhhchhhcccccccc
Confidence 389999999999999999999999999999877
No 6
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=96.17 E-value=0.0028 Score=40.02 Aligned_cols=26 Identities=15% Similarity=0.151 Sum_probs=12.6
Q ss_pred HHHhCcccceeccCCCCchhHHHHHH
Q 045880 10 ILDAFLVAIQEEDTNGKNIVLLAYTD 35 (142)
Q Consensus 10 ll~~~P~~~~~~D~~g~niLHvAv~~ 35 (142)
||+..|.-+...|.+|+|+||+|+++
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~ 26 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARY 26 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHH
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHc
Confidence 56777888999999999999999954
No 7
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=95.11 E-value=0.013 Score=47.29 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=18.2
Q ss_pred ChHHHHHHHHHh-CcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDA-FLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~-~P~~~~~~D~~g~niLHvAv 33 (142)
|+-|+|++|+.+ -|| .+..+++|+|.||+|+
T Consensus 83 g~~evVk~Ll~r~~ad-vna~tn~G~T~LHyAa 114 (226)
T KOG4412|consen 83 GNDEVVKELLNRSGAD-VNATTNGGQTCLHYAA 114 (226)
T ss_pred CcHHHHHHHhcCCCCC-cceecCCCcceehhhh
Confidence 566666666666 222 3445566666666666
No 8
>PHA02741 hypothetical protein; Provisional
Probab=94.74 E-value=0.03 Score=42.21 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=27.4
Q ss_pred CChHHHHHHHHHhC-----cccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAF-----LVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~-----P~~~~~~D~~g~niLHvAv~ 34 (142)
.|+.|+|+.++... ...+..+|..|+|+||+|+.
T Consensus 31 ~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~ 69 (169)
T PHA02741 31 CGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAE 69 (169)
T ss_pred cCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHH
Confidence 48899999987542 24578899999999999994
No 9
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=94.60 E-value=0.023 Score=52.06 Aligned_cols=31 Identities=23% Similarity=0.259 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
||.|||++|++.-- -++--|++|||+||+|+
T Consensus 594 ghyeIVkFLi~~ga-nVNa~DSdGWTPLHCAA 624 (752)
T KOG0515|consen 594 GHYEIVKFLIEFGA-NVNAADSDGWTPLHCAA 624 (752)
T ss_pred chhHHHHHHHhcCC-cccCccCCCCchhhhhh
Confidence 89999999998743 36778999999999999
No 10
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=94.52 E-value=0.027 Score=45.47 Aligned_cols=31 Identities=26% Similarity=0.249 Sum_probs=25.4
Q ss_pred ChHHHHHHHHHhCcc-cceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLV-AIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~-~~~~~D~~g~niLHvAv 33 (142)
|++|||+.|++ -|. -...-|+.||++||+|+
T Consensus 49 g~~eiv~fLls-q~nv~~ddkDdaGWtPlhia~ 80 (226)
T KOG4412|consen 49 GHVEIVYFLLS-QPNVKPDDKDDAGWTPLHIAA 80 (226)
T ss_pred CchhHHHHHHh-cCCCCCCCccccCCchhhhhh
Confidence 78899999997 454 36677999999999998
No 11
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=93.95 E-value=0.072 Score=35.29 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=28.2
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+.|+++.|++.-++. ...|.+|+|+||+|++
T Consensus 36 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 68 (89)
T PF12796_consen 36 NGNLEIVKLLLENGADI-NSQDKNGNTALHYAAE 68 (89)
T ss_dssp TTTHHHHHHHHHTTTCT-T-BSTTSSBHHHHHHH
T ss_pred cCCHHHHHHHHHhcccc-cccCCCCCCHHHHHHH
Confidence 58999999999987655 7778999999999994
No 12
>PHA02741 hypothetical protein; Provisional
Probab=93.94 E-value=0.057 Score=40.66 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCcccceeccC-CCCchhHHHH
Q 045880 4 IEIVEKILDAFLVAIQEEDT-NGKNIVLLAY 33 (142)
Q Consensus 4 ~eiV~~ll~~~P~~~~~~D~-~g~niLHvAv 33 (142)
.++++.|++.-.+ +...|. +|+|+||+|+
T Consensus 77 ~~ii~~Ll~~gad-in~~~~~~g~TpLh~A~ 106 (169)
T PHA02741 77 AEIIDHLIELGAD-INAQEMLEGDTALHLAA 106 (169)
T ss_pred HHHHHHHHHcCCC-CCCCCcCCCCCHHHHHH
Confidence 5788888887665 466674 8999999999
No 13
>PHA02736 Viral ankyrin protein; Provisional
Probab=93.72 E-value=0.064 Score=39.41 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=22.8
Q ss_pred HHHHHHHHHhCcccceecc-CCCCchhHHHH
Q 045880 4 IEIVEKILDAFLVAIQEED-TNGKNIVLLAY 33 (142)
Q Consensus 4 ~eiV~~ll~~~P~~~~~~D-~~g~niLHvAv 33 (142)
+|+++.|++...+. ...| .+|+|+||+|+
T Consensus 71 ~e~v~~Ll~~gadi-n~~~~~~g~T~Lh~A~ 100 (154)
T PHA02736 71 QEKLKLLMEWGADI-NGKERVFGNTPLHIAV 100 (154)
T ss_pred HHHHHHHHHcCCCc-cccCCCCCCcHHHHHH
Confidence 36788888887664 4566 58999999999
No 14
>PHA02743 Viral ankyrin protein; Provisional
Probab=93.36 E-value=0.083 Score=39.89 Aligned_cols=29 Identities=14% Similarity=0.245 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCcccceecc-CCCCchhHHHH
Q 045880 4 IEIVEKILDAFLVAIQEED-TNGKNIVLLAY 33 (142)
Q Consensus 4 ~eiV~~ll~~~P~~~~~~D-~~g~niLHvAv 33 (142)
+++|+.|++.-.+ +..+| ..|+|+||+|+
T Consensus 73 ~~~i~~Ll~~Gad-in~~d~~~g~TpLh~A~ 102 (166)
T PHA02743 73 VMKIELLVNMGAD-INARELGTGNTLLHIAA 102 (166)
T ss_pred HHHHHHHHHcCCC-CCCCCCCCCCcHHHHHH
Confidence 3457777776543 56677 58999999999
No 15
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=93.26 E-value=0.095 Score=38.32 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=30.4
Q ss_pred ChHHHHHHHHHhCc--ccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFL--VAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P--~~~~~~D~~g~niLHvAv~ 34 (142)
|+.++++.|++.-. +.....|.+|+|+||.|+.
T Consensus 122 ~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~ 156 (235)
T COG0666 122 GNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAAL 156 (235)
T ss_pred chHHHHHHHHHcCCCCCCccccCCCCCchhHHHHH
Confidence 55999999999999 7899999999999999993
No 16
>PHA02874 ankyrin repeat protein; Provisional
Probab=93.11 E-value=0.088 Score=45.09 Aligned_cols=34 Identities=24% Similarity=0.157 Sum_probs=29.9
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|++|.|++|++..|..+...|.+|.|+||.|++
T Consensus 11 ~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~ 44 (434)
T PHA02874 11 SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIR 44 (434)
T ss_pred cCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHH
Confidence 5889999999998888888888899999999994
No 17
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=92.58 E-value=0.1 Score=49.00 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=24.2
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+.++++.|++...| .+..|.+|+|+||+|+.
T Consensus 535 ~g~~~~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~ 567 (823)
T PLN03192 535 TGNAALLEELLKAKLD-PDIGDSKGRTPLHIAAS 567 (823)
T ss_pred cCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 4777888888877555 45677888888888883
No 18
>PHA02875 ankyrin repeat protein; Provisional
Probab=92.56 E-value=0.12 Score=43.70 Aligned_cols=32 Identities=28% Similarity=0.202 Sum_probs=18.7
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.++|+.|++..++.....|.+|+|+||+|+
T Consensus 79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~ 110 (413)
T PHA02875 79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLAT 110 (413)
T ss_pred CCHHHHHHHHHcCCcccccccCCCCCHHHHHH
Confidence 55566666666555544455555666666666
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=92.53 E-value=0.11 Score=45.02 Aligned_cols=33 Identities=9% Similarity=0.137 Sum_probs=28.3
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
.|+.|+|+.|+++-.+ +..+|.+|+|+||+|+.
T Consensus 47 ~g~~e~vk~Ll~~gad-vn~~d~~g~TpLh~A~~ 79 (477)
T PHA02878 47 ARNLDVVKSLLTRGHN-VNQPDHRDLTPLHIICK 79 (477)
T ss_pred cCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 4899999999998544 46789999999999994
No 20
>PHA02878 ankyrin repeat protein; Provisional
Probab=92.43 E-value=0.13 Score=44.59 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=19.3
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+.|+++.|++...+ +..+|.+|+|+||+|++
T Consensus 179 ~~~~iv~~Ll~~gad-~n~~d~~g~tpLh~A~~ 210 (477)
T PHA02878 179 KDQRLTELLLSYGAN-VNIPDKTNNSPLHHAVK 210 (477)
T ss_pred CCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH
Confidence 566666666665544 34556666666666663
No 21
>PHA02743 Viral ankyrin protein; Provisional
Probab=92.42 E-value=0.14 Score=38.68 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=22.8
Q ss_pred ChHHHHHHH---HHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKI---LDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~l---l~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+++.++++ +..++..+...|++|+|+||+|++
T Consensus 31 g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~ 66 (166)
T PHA02743 31 GNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAW 66 (166)
T ss_pred CCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHH
Confidence 555434332 223455678889999999999995
No 22
>PHA02946 ankyin-like protein; Provisional
Probab=92.40 E-value=0.12 Score=45.25 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=20.3
Q ss_pred hHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 3 VIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 3 ~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
..|+|+.|+++.++ +...|.+|+|+||+|++
T Consensus 51 ~~~iv~~Ll~~Gad-vn~~d~~G~TpLh~Aa~ 81 (446)
T PHA02946 51 DERFVEELLHRGYS-PNETDDDGNYPLHIASK 81 (446)
T ss_pred CHHHHHHHHHCcCC-CCccCCCCCCHHHHHHH
Confidence 45667777766555 35567777777777773
No 23
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=92.38 E-value=0.16 Score=33.79 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=28.7
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
.|+.++++.|++..++. ...|..|.++||.|+.
T Consensus 17 ~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~ 49 (126)
T cd00204 17 NGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAK 49 (126)
T ss_pred cCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHH
Confidence 47889999999998877 7788899999999994
No 24
>PHA02859 ankyrin repeat protein; Provisional
Probab=91.90 E-value=0.18 Score=39.53 Aligned_cols=32 Identities=9% Similarity=-0.028 Sum_probs=15.4
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.|+++.|+++..+.-..-+.+|+|+||+|+
T Consensus 64 ~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~ 95 (209)
T PHA02859 64 VNVEILKFLIENGADVNFKTRDNNLSALHHYL 95 (209)
T ss_pred CCHHHHHHHHHCCCCCCccCCCCCCCHHHHHH
Confidence 34555555555554442222235555555544
No 25
>PHA02791 ankyrin-like protein; Provisional
Probab=91.75 E-value=0.17 Score=42.13 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=21.2
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+.|+|+.|++.-.+ +..+|.+|+|+||+|++
T Consensus 71 ~g~~eiV~lLL~~Gad-vn~~d~~G~TpLh~Aa~ 103 (284)
T PHA02791 71 LEDTKIVKILLFSGMD-DSQFDDKGNTALYYAVD 103 (284)
T ss_pred CCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 3667777777764332 34567777777777773
No 26
>PHA02859 ankyrin repeat protein; Provisional
Probab=91.62 E-value=0.19 Score=39.33 Aligned_cols=32 Identities=31% Similarity=0.397 Sum_probs=26.9
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+.|+++.|+++-.+ +..+|.+|+|+||.|+.
T Consensus 101 ~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a~~ 132 (209)
T PHA02859 101 VEPEILKILIDSGSS-ITEEDEDGKNLLHMYMC 132 (209)
T ss_pred ccHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH
Confidence 578999999987544 57799999999999984
No 27
>PHA02875 ankyrin repeat protein; Provisional
Probab=91.52 E-value=0.18 Score=42.59 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=17.9
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.++++.|++..++ ....|..|+|+||+|+
T Consensus 146 ~~~~~v~~Ll~~g~~-~~~~d~~g~TpL~~A~ 176 (413)
T PHA02875 146 GDIKGIELLIDHKAC-LDIEDCCGCTPLIIAM 176 (413)
T ss_pred CCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHH
Confidence 555666666655332 3455666666666666
No 28
>PHA03100 ankyrin repeat protein; Provisional
Probab=91.41 E-value=0.17 Score=43.37 Aligned_cols=31 Identities=32% Similarity=0.318 Sum_probs=22.9
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.|+++.|++..++. ...|..|+|+||+|+
T Consensus 84 ~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~A~ 114 (480)
T PHA03100 84 DVKEIVKLLLEYGANV-NAPDNNGITPLLYAI 114 (480)
T ss_pred chHHHHHHHHHCCCCC-CCCCCCCCchhhHHH
Confidence 6677777777776666 667777777777777
No 29
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=91.37 E-value=0.16 Score=47.65 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=28.5
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+.++++.|+++..| ++..|++|+|+||+|++
T Consensus 632 ~g~~~~v~~Ll~~Gad-in~~d~~G~TpLh~A~~ 664 (823)
T PLN03192 632 RNDLTAMKELLKQGLN-VDSEDHQGATALQVAMA 664 (823)
T ss_pred hCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 4889999999998776 46789999999999994
No 30
>PHA02946 ankyin-like protein; Provisional
Probab=91.35 E-value=0.18 Score=44.18 Aligned_cols=32 Identities=16% Similarity=0.002 Sum_probs=27.4
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|+.|+|+.|+++-.+ +..+|.+|+|+||+|+
T Consensus 82 ~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~ 113 (446)
T PHA02946 82 INNNRIVAMLLTHGAD-PNACDKQHKTPLYYLS 113 (446)
T ss_pred cCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHH
Confidence 4899999999997544 4678999999999998
No 31
>PF13606 Ank_3: Ankyrin repeat
Probab=91.06 E-value=0.15 Score=28.56 Aligned_cols=12 Identities=33% Similarity=0.470 Sum_probs=10.4
Q ss_pred CCCchhHHHHHH
Q 045880 24 NGKNIVLLAYTD 35 (142)
Q Consensus 24 ~g~niLHvAv~~ 35 (142)
+|+|+||+|+++
T Consensus 1 ~G~T~Lh~A~~~ 12 (30)
T PF13606_consen 1 NGNTPLHLAASN 12 (30)
T ss_pred CCCCHHHHHHHh
Confidence 699999999954
No 32
>PHA02874 ankyrin repeat protein; Provisional
Probab=90.86 E-value=0.23 Score=42.56 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=23.1
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+.|+|+.|++.-++. ..+|.+|+|+||+|++
T Consensus 134 ~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~ 166 (434)
T PHA02874 134 KGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIK 166 (434)
T ss_pred CCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHH
Confidence 36777787777765553 4567777888888773
No 33
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=90.54 E-value=0.24 Score=46.92 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=26.2
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|+.|+|+.|++.-++ +...|++|+|+||+|+
T Consensus 294 ~g~leiVklLLe~GAd-IN~kD~~G~TPLH~Aa 325 (764)
T PHA02716 294 NIDISVVYSFLQPGVK-LHYKDSAGRTCLHQYI 325 (764)
T ss_pred cCCHHHHHHHHhCCCc-eeccCCCCCCHHHHHH
Confidence 3778889999887766 5678999999999876
No 34
>PHA02795 ankyrin-like protein; Provisional
Probab=90.39 E-value=0.26 Score=43.84 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=18.8
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.|+++.|+++-.+ +...|..|+|+||+|+
T Consensus 199 ~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa 229 (437)
T PHA02795 199 TVLEIYKLCIPYIED-INQLDAGGRTLLYRAI 229 (437)
T ss_pred CHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHH
Confidence 456666666665443 3556666666666666
No 35
>PHA02791 ankyrin-like protein; Provisional
Probab=90.27 E-value=0.27 Score=40.95 Aligned_cols=29 Identities=14% Similarity=0.126 Sum_probs=12.8
Q ss_pred ChHHHHHHHHHhCcccceecc-CCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEED-TNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D-~~g~niLHvAv 33 (142)
|+.|+|+.|+++.|+.. | ..|+|+||+|+
T Consensus 139 g~~eivk~LL~~~~~~~---d~~~g~TpLh~Aa 168 (284)
T PHA02791 139 NDVSIVSYFLSEIPSTF---DLAILLSCIHITI 168 (284)
T ss_pred CCHHHHHHHHhcCCccc---ccccCccHHHHHH
Confidence 44445555554444321 2 13455555555
No 36
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=89.92 E-value=0.24 Score=42.81 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=28.5
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|+-+||..|+++.-| ++-+|.+|+++||+|.
T Consensus 77 hghrdivqkll~~kad-vnavnehgntplhyac 108 (448)
T KOG0195|consen 77 HGHRDIVQKLLSRKAD-VNAVNEHGNTPLHYAC 108 (448)
T ss_pred cccHHHHHHHHHHhcc-cchhhccCCCchhhhh
Confidence 6999999999998665 5778999999999999
No 37
>PHA02736 Viral ankyrin protein; Provisional
Probab=89.82 E-value=0.41 Score=35.08 Aligned_cols=24 Identities=25% Similarity=0.231 Sum_probs=20.9
Q ss_pred HHHhCcccceeccCCCCchhHHHH
Q 045880 10 ILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 10 ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+...++.++..+|++|+|+||+|+
T Consensus 40 ~~~~~~~~~~~~d~~g~t~Lh~a~ 63 (154)
T PHA02736 40 ISDENRYLVLEYNRHGKQCVHIVS 63 (154)
T ss_pred hcchhHHHHHHhcCCCCEEEEeec
Confidence 456667888999999999999999
No 38
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=89.46 E-value=0.2 Score=27.99 Aligned_cols=11 Identities=18% Similarity=0.232 Sum_probs=9.9
Q ss_pred CCCchhHHHHH
Q 045880 24 NGKNIVLLAYT 34 (142)
Q Consensus 24 ~g~niLHvAv~ 34 (142)
+|+|+||+|++
T Consensus 1 dG~TpLh~A~~ 11 (33)
T PF00023_consen 1 DGNTPLHYAAQ 11 (33)
T ss_dssp TSBBHHHHHHH
T ss_pred CcccHHHHHHH
Confidence 59999999994
No 39
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=89.23 E-value=0.48 Score=31.45 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=27.6
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTD 35 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~~ 35 (142)
|+.++++.|++..+ .....|..|.+++|.|++.
T Consensus 51 ~~~~~~~~ll~~~~-~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 51 GHLEIVKLLLEKGA-DVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CCHHHHHHHHHcCC-CccccCCCCCCHHHHHHHc
Confidence 67899999999886 3467789999999999953
No 40
>PHA02798 ankyrin-like protein; Provisional
Probab=88.74 E-value=0.37 Score=42.15 Aligned_cols=31 Identities=13% Similarity=0.310 Sum_probs=21.7
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.++++.|+++-.| +...|..|+|+||+|+
T Consensus 87 ~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~ 117 (489)
T PHA02798 87 HMLDIVKILIENGAD-INKKNSDGETPLYCLL 117 (489)
T ss_pred hHHHHHHHHHHCCCC-CCCCCCCcCcHHHHHH
Confidence 456777777776555 5667777777777776
No 41
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=88.25 E-value=0.44 Score=43.96 Aligned_cols=31 Identities=26% Similarity=0.235 Sum_probs=17.4
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.++|+.|++.-.+ +...|.+|+|+||+|+
T Consensus 126 g~~eiv~~LL~~Gad-vn~~d~~G~TpLh~A~ 156 (664)
T PTZ00322 126 GHVQVVRVLLEFGAD-PTLLDKDGKTPLELAE 156 (664)
T ss_pred CCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHH
Confidence 555666666655333 2445566666666666
No 42
>PHA02989 ankyrin repeat protein; Provisional
Probab=88.18 E-value=0.47 Score=41.55 Aligned_cols=32 Identities=9% Similarity=0.175 Sum_probs=24.2
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.|+|+.|+++--|.-...|.+|+|+||+|+
T Consensus 122 ~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~ 153 (494)
T PHA02989 122 NNCDMLRFLLSKGINVNDVKNSRGYNLLHMYL 153 (494)
T ss_pred CcHHHHHHHHHCCCCcccccCCCCCCHHHHHH
Confidence 56788888888755544567888888888887
No 43
>PHA02798 ankyrin-like protein; Provisional
Probab=88.15 E-value=0.51 Score=41.29 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=13.7
Q ss_pred hHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 3 VIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 3 ~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+.++++.|++. . -+..+|..|+|+||+|+
T Consensus 238 ~~~i~~~l~~~-~-dvN~~d~~G~TPL~~A~ 266 (489)
T PHA02798 238 KKNILDFIFSY-I-DINQVDELGFNPLYYSV 266 (489)
T ss_pred hHHHHHHHHhc-C-CCCCcCcCCccHHHHHH
Confidence 34444444432 2 14455555555555555
No 44
>PHA03100 ankyrin repeat protein; Provisional
Probab=88.08 E-value=0.54 Score=40.30 Aligned_cols=30 Identities=23% Similarity=0.232 Sum_probs=20.1
Q ss_pred HHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 4 IEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 4 ~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
.++|+.|++.-- -+..+|.+|+|+||+|++
T Consensus 230 ~~iv~~Ll~~g~-din~~d~~g~TpL~~A~~ 259 (480)
T PHA03100 230 LEVVNYLLSYGV-PINIKDVYGFTPLHYAVY 259 (480)
T ss_pred HHHHHHHHHcCC-CCCCCCCCCCCHHHHHHH
Confidence 777777777622 245567777777777774
No 45
>PHA03095 ankyrin-like protein; Provisional
Probab=88.08 E-value=0.52 Score=40.21 Aligned_cols=30 Identities=23% Similarity=0.215 Sum_probs=15.9
Q ss_pred hHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 3 VIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 3 ~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+.|+++.|++.-.+ +...|.+|+|+||+|+
T Consensus 62 ~~~iv~~Ll~~Gad-in~~~~~g~TpLh~A~ 91 (471)
T PHA03095 62 VKDIVRLLLEAGAD-VNAPERCGFTPLHLYL 91 (471)
T ss_pred hHHHHHHHHHCCCC-CCCCCCCCCCHHHHHH
Confidence 55555555555433 3444555555555555
No 46
>PHA02795 ankyrin-like protein; Provisional
Probab=87.62 E-value=0.57 Score=41.75 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=28.3
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+.|+++.|++.-.+ +...|++|+|+||+|+.
T Consensus 231 ~g~~eiVelLL~~GAd-IN~~d~~G~TpLh~Aa~ 263 (437)
T PHA02795 231 AGYIDLVSWLLENGAN-VNAVMSNGYTCLDVAVD 263 (437)
T ss_pred cCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHH
Confidence 4899999999987544 57789999999999995
No 47
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=86.40 E-value=0.63 Score=44.13 Aligned_cols=32 Identities=9% Similarity=-0.020 Sum_probs=22.8
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+.|+|+.|++.-.+ ++..|.+|+|+||+|++
T Consensus 190 ~~~eIVklLLe~GAD-VN~kD~~G~TPLH~Aa~ 221 (764)
T PHA02716 190 VDIDILEWLCNNGVN-VNLQNNHLITPLHTYLI 221 (764)
T ss_pred CCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHH
Confidence 456788888776443 55677888888888873
No 48
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=85.89 E-value=0.73 Score=42.55 Aligned_cols=32 Identities=16% Similarity=0.042 Sum_probs=28.2
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|+.+.|+.|++...+ ++.+|.+|+|+||+|+
T Consensus 92 ~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa 123 (664)
T PTZ00322 92 SGDAVGARILLTGGAD-PNCRDYDGRTPLHIAC 123 (664)
T ss_pred cCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHH
Confidence 5899999999998666 4678999999999999
No 49
>PHA02989 ankyrin repeat protein; Provisional
Probab=85.80 E-value=0.75 Score=40.25 Aligned_cols=31 Identities=19% Similarity=0.127 Sum_probs=26.5
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.|+|+.|+++-.| +...|.+|+|+||.|+
T Consensus 86 ~~~~iv~~Ll~~Gad-in~~d~~g~tpL~~a~ 116 (494)
T PHA02989 86 KIKKIVKLLLKFGAD-INLKTFNGVSPIVCFI 116 (494)
T ss_pred hHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHH
Confidence 678999999988666 6778999999999987
No 50
>PHA02876 ankyrin repeat protein; Provisional
Probab=85.59 E-value=0.78 Score=41.76 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=22.7
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+.++++.|++.-.+ +...|..|+|+||+|++
T Consensus 156 ~~~~i~k~Ll~~Gad-vn~~d~~G~TpLh~Aa~ 187 (682)
T PHA02876 156 DELLIAEMLLEGGAD-VNAKDIYCITPIHYAAE 187 (682)
T ss_pred CcHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHH
Confidence 667777777776544 44567778888888883
No 51
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=85.26 E-value=0.73 Score=40.77 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=28.3
Q ss_pred CChHHHHHHHHHhCccc-ceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVA-IQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~-~~~~D~~g~niLHvAv~ 34 (142)
+||+|||+.||.. |.| +.+.|.+|-|+|.+|-+
T Consensus 383 HGhkEivklLLA~-p~cd~sLtD~DgSTAl~IAle 416 (452)
T KOG0514|consen 383 HGHKEIVKLLLAV-PSCDISLTDVDGSTALSIALE 416 (452)
T ss_pred hChHHHHHHHhcc-CcccceeecCCCchhhhhHHh
Confidence 6999999998887 655 78889999999999983
No 52
>PHA02730 ankyrin-like protein; Provisional
Probab=84.45 E-value=0.91 Score=42.53 Aligned_cols=32 Identities=16% Similarity=0.033 Sum_probs=26.4
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+.|+|+.|+++=-+ +...|++|+||||+|+.
T Consensus 55 ~~~eivklLLs~GAd-in~kD~~G~TPLh~Aa~ 86 (672)
T PHA02730 55 TDIKIVRLLLSRGVE-RLCRNNEGLTPLGVYSK 86 (672)
T ss_pred CcHHHHHHHHhCCCC-CcccCCCCCChHHHHHH
Confidence 469999999987444 45789999999999984
No 53
>PHA02884 ankyrin repeat protein; Provisional
Probab=84.41 E-value=1 Score=38.01 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=24.1
Q ss_pred CChHHHHHHHHHhCccccee---ccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQE---EDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~---~D~~g~niLHvAv~ 34 (142)
.|+.|+++.|+++-.|.=.. .|+.|+|+||+|++
T Consensus 43 ~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~ 79 (300)
T PHA02884 43 FHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAID 79 (300)
T ss_pred cCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHH
Confidence 37888999998875553221 25688999999984
No 54
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=84.39 E-value=0.59 Score=43.11 Aligned_cols=31 Identities=23% Similarity=0.246 Sum_probs=27.3
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.++++.|++ +|.-+...|+.|+|+||+|+
T Consensus 186 ~~~~iv~lLl~-~gadin~~d~~g~T~Lh~A~ 216 (743)
T TIGR00870 186 GSPSIVALLSE-DPADILTADSLGNTLLHLLV 216 (743)
T ss_pred CCHHHHHHHhc-CCcchhhHhhhhhHHHHHHH
Confidence 78899999887 47667889999999999999
No 55
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=83.98 E-value=1.1 Score=36.30 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=29.9
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|..+-|++||+.-|+.++.+|++|.|+||-|+
T Consensus 74 nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAa 105 (228)
T KOG0512|consen 74 NRLTEVQRLLSEKANHVNTRDEDEYTPLHRAA 105 (228)
T ss_pred ccHHHHHHHHHhccccccccccccccHHHHHH
Confidence 45678999999999999999999999999999
No 56
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=83.85 E-value=0.73 Score=45.52 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=27.2
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
.|++++|+.||++ +--+...|+.|+|+||.|+.
T Consensus 550 ~g~v~~VkfLLe~-gAdv~ak~~~G~TPLH~Aa~ 582 (1143)
T KOG4177|consen 550 YGNVDLVKFLLEH-GADVNAKDKLGYTPLHQAAQ 582 (1143)
T ss_pred cCCchHHHHhhhC-CccccccCCCCCChhhHHHH
Confidence 4889999999988 55667777999999999993
No 57
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=83.02 E-value=0.61 Score=43.52 Aligned_cols=32 Identities=31% Similarity=0.248 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHhCc-ccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFL-VAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P-~~~~~~D~~g~niLHvAv 33 (142)
|+-|||+.||++-| +++.+.|.+|.|.||-|+
T Consensus 910 g~~eivkyildh~p~elld~~de~get~lhkaa 942 (1004)
T KOG0782|consen 910 GNGEIVKYILDHGPSELLDMADETGETALHKAA 942 (1004)
T ss_pred CChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHH
Confidence 89999999999988 588999999999999999
No 58
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=83.02 E-value=1.1 Score=43.01 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=29.1
Q ss_pred CChHHHHHHHHHhCcccce--eccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQ--EEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~--~~D~~g~niLHvAv~ 34 (142)
+||-++++.|+++--.... ++|+.|.|+||.|+.
T Consensus 351 ~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~ 386 (929)
T KOG0510|consen 351 SGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAK 386 (929)
T ss_pred cCHHHHHHHHHhcChhhhcccccccCCchhhhHHHH
Confidence 5899999999998776664 679999999999994
No 59
>PHA03095 ankyrin-like protein; Provisional
Probab=82.38 E-value=1.4 Score=37.57 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=14.4
Q ss_pred hHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 3 VIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 3 ~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+.++++.|+++.++.... |.+|+|+||+|+
T Consensus 166 ~~~iv~~Ll~~g~~~~~~-d~~g~t~Lh~~~ 195 (471)
T PHA03095 166 NVELLRLLIDAGADVYAV-DDRFRSLLHHHL 195 (471)
T ss_pred CHHHHHHHHHcCCCCccc-CCCCCCHHHHHH
Confidence 345555555554443333 445555555544
No 60
>PHA02917 ankyrin-like protein; Provisional
Probab=81.48 E-value=1.4 Score=40.83 Aligned_cols=32 Identities=13% Similarity=-0.023 Sum_probs=27.3
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+.|+|+.|++.--| +...|.+|+|+||+|++
T Consensus 207 ~~~eiv~~Li~~Gad-vn~~d~~G~TpLh~A~~ 238 (661)
T PHA02917 207 VRPEVVKCLINHGIK-PSSIDKNYCTALQYYIK 238 (661)
T ss_pred CcHHHHHHHHHCCCC-cccCCCCCCcHHHHHHH
Confidence 578999999988544 57889999999999994
No 61
>PHA02884 ankyrin repeat protein; Provisional
Probab=80.35 E-value=1.8 Score=36.51 Aligned_cols=32 Identities=0% Similarity=-0.136 Sum_probs=21.0
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.|+++.|++.-.|.-...|..|+|+||+|+
T Consensus 81 ~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa 112 (300)
T PHA02884 81 DNDDAAKLLIRYGADVNRYAEEAKITPLYISV 112 (300)
T ss_pred CCHHHHHHHHHcCCCcCcccCCCCCCHHHHHH
Confidence 66777777777655443333456777777777
No 62
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=80.07 E-value=1.6 Score=38.68 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=29.1
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTD 35 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~~ 35 (142)
+|++++|+.||.. -.=++..|.+|-|+|.+|.+|
T Consensus 350 HGr~d~vk~LLac-gAdVNiQDdDGSTALMCA~EH 383 (452)
T KOG0514|consen 350 HGRVDMVKALLAC-GADVNIQDDDGSTALMCAAEH 383 (452)
T ss_pred cCcHHHHHHHHHc-cCCCccccCCccHHHhhhhhh
Confidence 6999999998864 555788899999999999976
No 63
>PHA02917 ankyrin-like protein; Provisional
Probab=79.99 E-value=1.7 Score=40.34 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=26.2
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|+.++|+.|+++-.| +..+|..|+|+||+|+.
T Consensus 430 ~~~~~v~~Ll~~GAd-IN~kd~~G~TpLh~Aa~ 461 (661)
T PHA02917 430 PILSTINICLPYLKD-INMIDKRGETLLHKAVR 461 (661)
T ss_pred hhHHHHHHHHHCCCC-CCCCCCCCcCHHHHHHH
Confidence 456788888887666 57789999999999993
No 64
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=79.90 E-value=1.4 Score=35.70 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=26.1
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|+++||.+|+.+.-+ -+-+-+.|||+||-|.+
T Consensus 107 n~h~div~~ll~~gAn-~~a~T~~GWTPLhSAck 139 (228)
T KOG0512|consen 107 NGHLDIVHELLLSGAN-KEAKTNEGWTPLHSACK 139 (228)
T ss_pred cCchHHHHHHHHccCC-cccccccCccchhhhhc
Confidence 6999999999976333 24466889999999994
No 65
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=79.82 E-value=1.4 Score=41.99 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHhCcccceec--c--CCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEE--D--TNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~--D--~~g~niLHvAv~ 34 (142)
|+.|++..|++.+|.+++.. | =.|+|+||+||.
T Consensus 157 ~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv 193 (782)
T KOG3676|consen 157 GHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIV 193 (782)
T ss_pred hHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHH
Confidence 67799999999999987653 3 389999999994
No 66
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=78.75 E-value=1.9 Score=39.93 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=20.3
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|++.+|+.|+++ -.-...+|.+|-|+||+|+.
T Consensus 122 ~G~~~vv~lLlqh-GAdpt~~D~~G~~~lHla~~ 154 (600)
T KOG0509|consen 122 NGHISVVDLLLQH-GADPTLKDKQGLTPLHLAAQ 154 (600)
T ss_pred cCcHHHHHHHHHc-CCCCceecCCCCcHHHHHHH
Confidence 4677777777765 22234566666666666663
No 67
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=77.91 E-value=2.7 Score=30.48 Aligned_cols=31 Identities=26% Similarity=0.265 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|..++++.++..-.+. ...|..|.|+||+|+
T Consensus 84 ~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~ 114 (235)
T COG0666 84 GDDKIVKLLLASGADV-NAKDADGDTPLHLAA 114 (235)
T ss_pred CcHHHHHHHHHcCCCc-ccccCCCCcHHHHHH
Confidence 5677888888888888 999999999999999
No 68
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=77.43 E-value=2.4 Score=40.40 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=28.6
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTD 35 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~~ 35 (142)
+..|+++.|++ ++.=....|++|+|+||.-|.+
T Consensus 251 nq~eivrlLl~-~gAd~~aqDS~GNTVLH~lVi~ 283 (782)
T KOG3676|consen 251 NQPEIVRLLLA-HGADPNAQDSNGNTVLHMLVIH 283 (782)
T ss_pred CCHHHHHHHHh-cCCCCCccccCCChHHHHHHHH
Confidence 56899999998 6777888999999999999944
No 69
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=74.06 E-value=2.6 Score=39.04 Aligned_cols=29 Identities=17% Similarity=0.198 Sum_probs=18.2
Q ss_pred HHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 5 EIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 5 eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
..+..||+..++.....|++|.|+||.|+
T Consensus 192 ~~v~~LL~f~a~~~~~d~~~g~TpLHwa~ 220 (600)
T KOG0509|consen 192 LFVRRLLKFGASLLLTDDNHGNTPLHWAV 220 (600)
T ss_pred HHHHHHHHhcccccccccccCCchHHHHH
Confidence 34666666666666666666666666666
No 70
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=73.67 E-value=2.5 Score=39.03 Aligned_cols=29 Identities=21% Similarity=0.220 Sum_probs=14.9
Q ss_pred ChHHHHHHHHHhCcc-cceeccCCCCchhH
Q 045880 2 GVIEIVEKILDAFLV-AIQEEDTNGKNIVL 30 (142)
Q Consensus 2 G~~eiV~~ll~~~P~-~~~~~D~~g~niLH 30 (142)
|+.+.|+.+++..+. -++..|..|+|+||
T Consensus 28 g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh 57 (743)
T TIGR00870 28 GDLASVYRDLEEPKKLNINCPDRLGRSALF 57 (743)
T ss_pred CCHHHHHHHhccccccCCCCcCccchhHHH
Confidence 555666666555221 13344555666666
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=73.12 E-value=3.4 Score=38.61 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=25.3
Q ss_pred CChHHHHHHHHHhCcc-----------------------------------cceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLV-----------------------------------AIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~-----------------------------------~~~~~D~~g~niLHvAv 33 (142)
+|+.|||+.|+++--+ .+..-|..|+|+||+|+
T Consensus 116 ~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i 183 (631)
T PHA02792 116 NPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYI 183 (631)
T ss_pred CCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHH
Confidence 4889999999987432 22355778999999999
No 72
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=70.17 E-value=2.2 Score=35.69 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=31.6
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
.|+.++.+.....||+++-..|+.|++++|+|..
T Consensus 72 s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap 105 (296)
T KOG0502|consen 72 SGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAP 105 (296)
T ss_pred cCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCC
Confidence 4788999999999999999999999999999994
No 73
>PHA02730 ankyrin-like protein; Provisional
Probab=69.98 E-value=4.1 Score=38.28 Aligned_cols=29 Identities=14% Similarity=0.192 Sum_probs=23.8
Q ss_pred HHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 5 EIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 5 eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
++++.|+.+-.+ +...|+.|+|+||+|+.
T Consensus 443 ~ivk~LIs~GAD-INakD~~G~TPLh~Aa~ 471 (672)
T PHA02730 443 DVFDILSKYMDD-IDMIDNENKTLLYYAVD 471 (672)
T ss_pred HHHHHHHhcccc-hhccCCCCCCHHHHHHH
Confidence 567888876545 78899999999999994
No 74
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=69.92 E-value=2 Score=35.94 Aligned_cols=32 Identities=31% Similarity=0.306 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|.++||+.||.+.||. +.-|-||-|+|.+||+
T Consensus 204 gytdiV~lLL~r~vdV-NvyDwNGgTpLlyAvr 235 (296)
T KOG0502|consen 204 GYTDIVELLLTREVDV-NVYDWNGGTPLLYAVR 235 (296)
T ss_pred ChHHHHHHHHhcCCCc-ceeccCCCceeeeeec
Confidence 7889999999999884 6679999999999995
No 75
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=69.14 E-value=4.5 Score=37.08 Aligned_cols=31 Identities=32% Similarity=0.382 Sum_probs=20.7
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|++|||++|++.. +..++|.+|.|+|..|.
T Consensus 193 sG~vdivq~Ll~~g--a~i~~d~~GmtPL~~Aa 223 (615)
T KOG0508|consen 193 SGSVDIVQLLLKHG--AKIDVDGHGMTPLLLAA 223 (615)
T ss_pred cccHHHHHHHHhCC--ceeeecCCCCchHHHHh
Confidence 46777777777653 44566777777777776
No 76
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=65.26 E-value=5.7 Score=36.42 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=26.7
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
+|++||++.|++.--|. +-.+-+|+|+||-+++
T Consensus 160 kGh~~I~qyLle~gADv-n~ks~kGNTALH~caE 192 (615)
T KOG0508|consen 160 KGHVDIAQYLLEQGADV-NAKSYKGNTALHDCAE 192 (615)
T ss_pred cCchHHHHHHHHhCCCc-chhcccCchHHHhhhh
Confidence 58899999999887664 4467899999999985
No 77
>PHA02792 ankyrin-like protein; Provisional
Probab=64.09 E-value=6.9 Score=36.58 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=15.6
Q ss_pred HHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 5 EIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 5 eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
++++.++++-.| +...|+.|+|+||+|+
T Consensus 391 ~IlklLIs~GAD-IN~kD~~G~TPLh~Aa 418 (631)
T PHA02792 391 SILKLCKPYIDD-INKIDKHGRSILYYCI 418 (631)
T ss_pred HHHHHHHhcCCc-cccccccCcchHHHHH
Confidence 344555544333 3556666666666666
No 78
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=61.26 E-value=6.5 Score=35.99 Aligned_cols=32 Identities=22% Similarity=0.213 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|..++.+.|++. -......|.+||++||.|+
T Consensus 208 ~Gy~e~~~lLl~a-g~~~~~~D~dgWtPlHAAA 239 (527)
T KOG0505|consen 208 NGYTEVAALLLQA-GYSVNIKDYDGWTPLHAAA 239 (527)
T ss_pred hhHHHHHHHHHHh-ccCcccccccCCCcccHHH
Confidence 5888888888876 5566788999999999999
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=59.15 E-value=7.2 Score=28.65 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=20.8
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
||..+-|+.....--+.=+.. .||++||+|+.
T Consensus 12 NG~~DeVk~~v~~g~nVn~~~--ggR~plhyAAD 43 (117)
T KOG4214|consen 12 NGEIDEVKQSVNEGLNVNEIY--GGRTPLHYAAD 43 (117)
T ss_pred cCcHHHHHHHHHccccHHHHh--CCcccchHhhh
Confidence 466777777666542222222 78999999993
No 80
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=57.55 E-value=10 Score=37.86 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=29.6
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTD 35 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~~ 35 (142)
.|+.|+++.|+++ +.+....|.+|.|+||+|++.
T Consensus 583 ~G~~~i~~LLlk~-GA~vna~d~~g~TpL~iA~~l 616 (1143)
T KOG4177|consen 583 QGHNDIAELLLKH-GASVNAADLDGFTPLHIAVRL 616 (1143)
T ss_pred cChHHHHHHHHHc-CCCCCcccccCcchhHHHHHh
Confidence 4788888888876 888999999999999999964
No 81
>PF07954 DUF1689: Protein of unknown function (DUF1689) ; InterPro: IPR012470 Family of fungal proteins with unknown function. A member of this family has been found to localise in the mitochondria [].
Probab=56.88 E-value=40 Score=26.07 Aligned_cols=68 Identities=19% Similarity=0.119 Sum_probs=51.5
Q ss_pred hhhhhhhhhhhhhhHHHHhhhhhhHHHHHHHHHHHHHhhhccCCcccC-----CCCcccccccchhhHHHHHHH
Q 045880 63 HFTKTHKKLGKRGSKWLIKTSKACFVFAMLIANVAFAASTTVSGVLNE-----DYGRPILLEEIAFHIFAISLL 131 (142)
Q Consensus 63 ~f~~~h~~l~~~~~~~~k~~~~s~~vvA~LIATvtFaAaftvPGG~~~-----~~G~~~l~~~~~F~~F~i~~~ 131 (142)
-|.|.+++|-.+-+.+|.+.=++...-..++.-.+|.++|-.|--|.- -.|.|+=. +..|--|++-=+
T Consensus 6 ~FYEaD~~L~~~DR~eL~~~~q~i~~~~~~~g~~~~~~gF~~Pt~y~~yk~~~~~gv~~~~-~~pflSf~lG~~ 78 (152)
T PF07954_consen 6 EFYEADQKLDHEDRLELAKDLQSIARKSNLGGYGGFMAGFFAPTAYYRYKTGAIKGVPVPR-QKPFLSFLLGLG 78 (152)
T ss_pred HHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcccccCCcCCc-cCcchhHHHHHH
Confidence 467777888777777888888888888899999999999999988852 25777644 556666665433
No 82
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=56.56 E-value=1.5 Score=42.71 Aligned_cols=32 Identities=28% Similarity=-0.010 Sum_probs=25.3
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+.|..-.++..+...+..+|.+||++||+|.
T Consensus 618 lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa 649 (975)
T KOG0520|consen 618 LGYEWAFLPISADGVAIDIRDRNGWTPLHWAA 649 (975)
T ss_pred cCCceeEEEEeecccccccccCCCCcccchHh
Confidence 34444455666777889999999999999999
No 83
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=55.15 E-value=9 Score=37.06 Aligned_cols=32 Identities=31% Similarity=0.370 Sum_probs=26.5
Q ss_pred ChHHHHHHHHHhCcc--cceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLV--AIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~--~~~~~D~~g~niLHvAv~ 34 (142)
|+..-|+.||+ -|| ++.+-|-.|+||||+|++
T Consensus 317 g~~ntv~rLL~-~~~~rllne~D~~g~tpLHlaa~ 350 (929)
T KOG0510|consen 317 GRINTVERLLQ-ESDTRLLNESDLHGMTPLHLAAK 350 (929)
T ss_pred ccHHHHHHHHh-CcCccccccccccCCCchhhhhh
Confidence 77888999999 454 678888899999999993
No 84
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=51.26 E-value=27 Score=26.62 Aligned_cols=54 Identities=17% Similarity=0.055 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHHHhh---hccCCcccCCCCcccccccchhhHHHHHHHHHHHHHhhhc
Q 045880 86 CFVFAMLIANVAFAAS---TTVSGVLNEDYGRPILLEEIAFHIFAISLLVYLCFLGTTL 141 (142)
Q Consensus 86 ~~vvA~LIATvtFaAa---ftvPGG~~~~~G~~~l~~~~~F~~F~i~~~~a~~~S~~av 141 (142)
+.++++|+|.+..++. -+++|+. .+=++.+.+-++|+.|+.+|.++...|+.++
T Consensus 6 ~~~~~sl~A~vvm~t~~qt~~~~~~~--~~~~a~f~d~~af~y~v~anai~~~Ysll~l 62 (154)
T TIGR01569 6 LAFSATLAAAIVMGTNRETKVVFVQL--ITFKAKFSDLPAFVYFVVANAIACGYSLLSL 62 (154)
T ss_pred HHHHHHHHHHHHhhcccceeeeeccc--ceeeeeeeccHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666666655542 2223321 1124667788999999999999888887654
No 85
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=46.55 E-value=13 Score=34.12 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=25.7
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
.+.++|+++++. ---+...|+.|||+||.|.
T Consensus 84 ~~~e~v~~l~e~-ga~Vn~~d~e~wtPlhaaa 114 (527)
T KOG0505|consen 84 DNLEMVKFLVEN-GANVNAQDNEGWTPLHAAA 114 (527)
T ss_pred ccHHHHHHHHHh-cCCccccccccCCcchhhc
Confidence 467899998887 3446778999999999999
No 86
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=46.34 E-value=22 Score=30.94 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.0
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+||.++|+.+|+.--|.=...+..+.|+||.|+
T Consensus 55 kGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 55 KGNLTLVELLLELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred cCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence 599999999999988888888889999999999
No 87
>PF05055 DUF677: Protein of unknown function (DUF677); InterPro: IPR007749 This entry contains proteins belonging to the UPF0496 family, found in plants. This family includes AT14A like proteins from Arabidopsis thaliana. At14a contains a small domain that has sequence similarities to integrins from fungi, insects and humans. Transcripts of At14a are found in all Arabidopsis tissues and the protein localises partly to the plasma membrane [].
Probab=44.91 E-value=67 Score=27.77 Aligned_cols=12 Identities=25% Similarity=0.008 Sum_probs=7.4
Q ss_pred HHHhhhccCCcc
Q 045880 97 AFAASTTVSGVL 108 (142)
Q Consensus 97 tFaAaftvPGG~ 108 (142)
+++++.+.|.|.
T Consensus 211 ~~aa~~a~P~~~ 222 (336)
T PF05055_consen 211 ALAAALAAPIGS 222 (336)
T ss_pred HHHHHHccchHH
Confidence 355667777654
No 88
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=41.70 E-value=17 Score=35.05 Aligned_cols=32 Identities=28% Similarity=0.167 Sum_probs=16.3
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
+|+.++++.|+++.+ ++.+.|.+|..+||+|+
T Consensus 59 ng~~~is~llle~ea-~ldl~d~kg~~plhlaa 90 (854)
T KOG0507|consen 59 NGQNQISKLLLDYEA-LLDLCDTKGILPLHLAA 90 (854)
T ss_pred cCchHHHHHHhcchh-hhhhhhccCcceEEehh
Confidence 355555555555432 33444455555555555
No 89
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=39.63 E-value=27 Score=16.07 Aligned_cols=16 Identities=31% Similarity=0.335 Sum_probs=12.3
Q ss_pred CChHHHHHHHHHhCcc
Q 045880 1 MGVIEIVEKILDAFLV 16 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~ 16 (142)
.|+.++++.|++..++
T Consensus 12 ~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 12 NGNLEVVKLLLDKGAD 27 (30)
T ss_pred cCCHHHHHHHHHcCCC
Confidence 3678899999987654
No 90
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=37.74 E-value=26 Score=32.33 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=16.8
Q ss_pred HHHHHHhCcccceeccCCCCchhHHHH
Q 045880 7 VEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 7 V~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
.++++..--..+..+|..|+|+||+||
T Consensus 37 ~~el~~~~~~~id~~D~~g~TpLhlAV 63 (560)
T KOG0522|consen 37 EQELLAKVSLVIDRRDPPGRTPLHLAV 63 (560)
T ss_pred HHHHhhhhhceeccccCCCCccHHHHH
Confidence 344444433456667777778888777
No 91
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=35.18 E-value=94 Score=21.04 Aligned_cols=54 Identities=15% Similarity=0.053 Sum_probs=28.1
Q ss_pred hhhhHHHHHHHHHHHHHhhhccCCcccCCCCcccccccchhhHHHHHHHHHHHHHhh
Q 045880 83 SKACFVFAMLIANVAFAASTTVSGVLNEDYGRPILLEEIAFHIFAISLLVYLCFLGT 139 (142)
Q Consensus 83 ~~s~~vvA~LIATvtFaAaftvPGG~~~~~G~~~l~~~~~F~~F~i~~~~a~~~S~~ 139 (142)
.-...++|++++++.|.--|..|+.++. +....+......|++.-.+++++|..
T Consensus 45 G~~~gl~aa~ls~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~va~v~g~l 98 (105)
T PF13493_consen 45 GLRPGLFAALLSSLLLNFFFFPPPFYDL---TFLVYDPQDWITFAVFLVVALVTGYL 98 (105)
T ss_dssp SS---SHHHHHHHHHHHHTTS-SS-------TT-SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCcccc---chhhcChhHHHHHHHHHHHHHHHHHH
Confidence 3456788999999999877777665432 22233333344555555567766654
No 92
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=34.68 E-value=27 Score=33.52 Aligned_cols=32 Identities=22% Similarity=0.185 Sum_probs=25.7
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|..-+++.|++.--+ +..+|.+|+|+||.++.
T Consensus 667 ~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~ 698 (785)
T KOG0521|consen 667 GDSGAVELLLQNGAD-VNALDSKGRTPLHHATA 698 (785)
T ss_pred chHHHHHHHHhcCCc-chhhhccCCCcchhhhh
Confidence 556667777777555 99999999999999984
No 93
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=32.91 E-value=15 Score=35.32 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=29.5
Q ss_pred CChHHHHHHHHHhCcccceeccCCCCchhHHHHHH
Q 045880 1 MGVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYTD 35 (142)
Q Consensus 1 ~G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~~ 35 (142)
+|+.|+|+-++..- |..+-++-.|.++||.||.+
T Consensus 92 ~g~~e~vkmll~q~-d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 92 NGNLEIVKMLLLQT-DILNAVNIENETPLHLAAQH 125 (854)
T ss_pred cCcchHHHHHHhcc-cCCCcccccCcCccchhhhh
Confidence 58899999988887 88888888999999999965
No 94
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=30.80 E-value=47 Score=30.71 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=25.5
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
|+++-++.|+...-| +...|++|||+||-||
T Consensus 66 g~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv 96 (560)
T KOG0522|consen 66 GHVEAARILLSAGAD-VSIKNNEGWSPLHEAV 96 (560)
T ss_pred cCHHHHHHHHhcCCC-ccccccccccHHHHHH
Confidence 677888888877544 5678999999999999
No 95
>PRK09917 hypothetical protein; Provisional
Probab=30.64 E-value=41 Score=25.81 Aligned_cols=21 Identities=24% Similarity=0.172 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhhhccCCcc
Q 045880 88 VFAMLIANVAFAASTTVSGVL 108 (142)
Q Consensus 88 vvA~LIATvtFaAaftvPGG~ 108 (142)
.+.+.+||++|+-.|++|+..
T Consensus 14 ~~~a~ia~~gFailfn~P~r~ 34 (157)
T PRK09917 14 MILAAIPAVGFAMVFNVPVRA 34 (157)
T ss_pred HHHHHHHHHHHHHhhCCcHHH
Confidence 567889999999999999854
No 96
>PF13033 DUF3894: Protein of unknown function (DUF3894)
Probab=29.54 E-value=43 Score=21.35 Aligned_cols=22 Identities=14% Similarity=0.389 Sum_probs=19.1
Q ss_pred chhhHHHHHHHHHHHHHhhhcC
Q 045880 121 IAFHIFAISLLVYLCFLGTTLI 142 (142)
Q Consensus 121 ~~F~~F~i~~~~a~~~S~~av~ 142 (142)
..|..|+++-..+|.+|+.+++
T Consensus 31 k~ytsfv~al~m~f~fsiva~v 52 (54)
T PF13033_consen 31 KQYTSFVMALVMAFSFSIVAIV 52 (54)
T ss_pred hhhHHHHHHHHHHHHhHheeeE
Confidence 5678899999999999998874
No 97
>PF08984 DUF1858: Domain of unknown function (DUF1858); InterPro: IPR015077 This protein has no known function. It is found in various hypothetical bacterial proteins. ; PDB: 2K53_A 2K5E_A 2FI0_A.
Probab=25.84 E-value=33 Score=21.69 Aligned_cols=23 Identities=13% Similarity=0.193 Sum_probs=16.4
Q ss_pred HHHHHHhCcccceeccCCCCchh
Q 045880 7 VEKILDAFLVAIQEEDTNGKNIV 29 (142)
Q Consensus 7 V~~ll~~~P~~~~~~D~~g~niL 29 (142)
|.+|++.||++.+..-+.|-.-|
T Consensus 7 I~el~~~yP~~~~il~~~gf~~l 29 (59)
T PF08984_consen 7 IYELLEQYPELIEILVSYGFHCL 29 (59)
T ss_dssp HHHHHHH-GGGHHHHHHTTGGGG
T ss_pred HHHHHHHCHHHHHHHHHcCCccc
Confidence 67899999998877666565544
No 98
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=23.70 E-value=68 Score=20.63 Aligned_cols=23 Identities=26% Similarity=0.192 Sum_probs=19.4
Q ss_pred HHHHHHHHhCcccceeccCCCCc
Q 045880 5 EIVEKILDAFLVAIQEEDTNGKN 27 (142)
Q Consensus 5 eiV~~ll~~~P~~~~~~D~~g~n 27 (142)
|-.+.|++.-|+.+...|.+|+=
T Consensus 1 e~~~~i~~~~~~~i~~~d~~g~I 23 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDEDGRI 23 (113)
T ss_dssp HHHHHHHHCSSSEEEEEETTSBE
T ss_pred CHHHHHHhcCCceEEEEeCcCeE
Confidence 45678999999999999988863
No 99
>TIGR02184 Myco_arth_vir_N Mycoplasma virulence family signal region. This model represents the N-terminal region, including a probable signal sequence or signal anchor which in most instances has four consecutive Lys residues before the hydrophobic stretch, of a family of large, virulence-associated proteins in Mycoplasma arthritidis and smaller proteins in Mycoplasma capricolum.
Probab=22.32 E-value=39 Score=19.77 Aligned_cols=22 Identities=5% Similarity=0.161 Sum_probs=17.2
Q ss_pred HhhhhhhHHHHHHHHHHHHHhh
Q 045880 80 IKTSKACFVFAMLIANVAFAAS 101 (142)
Q Consensus 80 k~~~~s~~vvA~LIATvtFaAa 101 (142)
|+..=.+.++|.|+++++|.+.
T Consensus 8 KnkIl~~al~a~l~~S~s~g~V 29 (33)
T TIGR02184 8 KNKIATLVIVTSLLTSLTISGV 29 (33)
T ss_pred hhheehHHHHHHHHHhheeeeE
Confidence 5556678899999999988654
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=22.31 E-value=72 Score=30.17 Aligned_cols=31 Identities=16% Similarity=0.391 Sum_probs=23.2
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
||+.+-..|+ .|--=..-+|.+|||+|-+|=
T Consensus 672 gnVvl~QLLi-Wyg~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 672 GNVVLAQLLI-WYGVDVMARDAHGRTALFYAR 702 (749)
T ss_pred cchhHHHHHH-HhCccceecccCCchhhhhHh
Confidence 6776666555 555556778999999999987
No 101
>PF04224 DUF417: Protein of unknown function, DUF417; InterPro: IPR007339 This family of uncharacterised proteins appears to be restricted to proteobacteria.
Probab=22.29 E-value=3.3e+02 Score=21.61 Aligned_cols=41 Identities=24% Similarity=0.170 Sum_probs=28.0
Q ss_pred HHHHhhhccCCcccCC-CCcccccccchhhHHHHHHHHHHHHHhh
Q 045880 96 VAFAASTTVSGVLNED-YGRPILLEEIAFHIFAISLLVYLCFLGT 139 (142)
Q Consensus 96 vtFaAaftvPGG~~~~-~G~~~l~~~~~F~~F~i~~~~a~~~S~~ 139 (142)
+|.+=-||-||.+..+ .|-|.+... .-|++=|.+-+..|+.
T Consensus 124 vTLSFL~TTP~vw~~~~GGFP~Lsg~---g~fllKDivlLa~~l~ 165 (175)
T PF04224_consen 124 VTLSFLFTTPGVWVPSLGGFPYLSGA---GRFLLKDIVLLAASLV 165 (175)
T ss_pred HHHHHHhcCCCeeeccCCCCceecCC---CchHHHHHHHHHHHHH
Confidence 3344468899987655 568988753 5577888876666654
No 102
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=22.19 E-value=38 Score=20.47 Aligned_cols=14 Identities=29% Similarity=0.275 Sum_probs=9.0
Q ss_pred cccceeccCCCCch
Q 045880 15 LVAIQEEDTNGKNI 28 (142)
Q Consensus 15 P~~~~~~D~~g~ni 28 (142)
|..-.++|.+||||
T Consensus 15 ~gM~sl~D~~gRTi 28 (39)
T PF09292_consen 15 PGMKSLRDRNGRTI 28 (39)
T ss_dssp TT-EEEE-TTS-EE
T ss_pred cccccccccCCCEE
Confidence 56678899999997
No 103
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=21.27 E-value=21 Score=35.17 Aligned_cols=27 Identities=11% Similarity=0.001 Sum_probs=23.9
Q ss_pred HHHHHHhCcccceeccCCCCchhHHHH
Q 045880 7 VEKILDAFLVAIQEEDTNGKNIVLLAY 33 (142)
Q Consensus 7 V~~ll~~~P~~~~~~D~~g~niLHvAv 33 (142)
--.+.+.|-.++...|.-|||+||+|+
T Consensus 34 k~F~~k~c~n~anikD~~GR~alH~~~ 60 (1267)
T KOG0783|consen 34 KGFSEKSCQNLANIKDRYGRTALHIAV 60 (1267)
T ss_pred HHHHHHhhhhhhhHHHhhccceeeeee
Confidence 345778899999999999999999999
No 104
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=20.91 E-value=87 Score=27.43 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=23.5
Q ss_pred ChHHHHHHHHHhCcccceeccCCCCchhHHHHH
Q 045880 2 GVIEIVEKILDAFLVAIQEEDTNGKNIVLLAYT 34 (142)
Q Consensus 2 G~~eiV~~ll~~~P~~~~~~D~~g~niLHvAv~ 34 (142)
|++.+||-|+++- .-++..|-...++||+|+.
T Consensus 45 gh~aivemll~rg-arvn~tnmgddtplhlaaa 76 (448)
T KOG0195|consen 45 GHVAIVEMLLSRG-ARVNSTNMGDDTPLHLAAA 76 (448)
T ss_pred ccHHHHHHHHhcc-cccccccCCCCcchhhhhh
Confidence 8889999998873 3344455555899999993
No 105
>PF13475 DUF4116: Domain of unknown function (DUF4116)
Probab=20.73 E-value=61 Score=18.89 Aligned_cols=31 Identities=29% Similarity=0.193 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCcccceeccC---CCCchhHHHHH
Q 045880 4 IEIVEKILDAFLVAIQEEDT---NGKNIVLLAYT 34 (142)
Q Consensus 4 ~eiV~~ll~~~P~~~~~~D~---~g~niLHvAv~ 34 (142)
.|+|.+.++.+|.++...+. +.+.+..-|++
T Consensus 2 ~e~v~~~v~~~~~~l~~~~~~lk~D~e~vl~av~ 35 (49)
T PF13475_consen 2 REFVLEAVKKNGYALQYASEELKNDKEFVLKAVK 35 (49)
T ss_pred HHHHHHHHHhCCHHHHHhCHHHhCCHHHHHHHHH
Confidence 57888889998888776664 36777777774
Done!