Query 045882
Match_columns 832
No_of_seqs 591 out of 3300
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 06:28:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045882.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045882hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 6E-190 1E-194 1691.4 88.9 832 1-832 1-849 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 6E-162 1E-166 1438.0 81.4 746 58-832 93-931 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 8E-154 2E-158 1381.3 82.9 746 56-831 8-787 (797)
4 PRK14501 putative bifunctional 100.0 7E-144 2E-148 1299.4 84.2 720 59-829 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 3E-133 7E-138 1164.5 61.6 728 58-825 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 1E-120 3E-125 1017.1 48.8 456 58-549 1-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 9E-119 2E-123 1013.9 48.1 462 64-546 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 1E-119 3E-124 1023.6 30.3 467 60-546 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 1E-113 3E-118 954.1 44.1 467 54-547 10-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 3E-107 6E-112 926.9 48.7 454 60-545 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1E-97 2E-102 854.7 51.9 459 60-544 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 1.7E-35 3.7E-40 354.7 42.0 527 200-783 312-994 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 1.9E-35 4.2E-40 308.8 24.0 247 566-830 5-254 (266)
14 PF02358 Trehalose_PPase: Treh 100.0 1.6E-35 3.5E-40 311.2 18.4 226 583-817 1-234 (235)
15 PLN03017 trehalose-phosphatase 100.0 9.1E-34 2E-38 307.5 27.5 246 568-830 101-361 (366)
16 PLN02151 trehalose-phosphatase 100.0 1.6E-33 3.5E-38 304.7 27.7 240 574-829 93-346 (354)
17 TIGR00685 T6PP trehalose-phosp 100.0 1.7E-33 3.7E-38 297.3 26.7 237 577-828 1-243 (244)
18 PLN02580 trehalose-phosphatase 100.0 2.5E-33 5.5E-38 306.8 27.6 238 572-829 112-378 (384)
19 PRK10187 trehalose-6-phosphate 100.0 4E-33 8.6E-38 297.5 27.4 230 578-830 13-246 (266)
20 COG0561 Cof Predicted hydrolas 99.9 2.2E-26 4.8E-31 246.3 23.5 225 578-829 2-262 (264)
21 PRK10513 sugar phosphate phosp 99.9 5.8E-26 1.3E-30 243.8 25.5 223 578-828 2-268 (270)
22 PRK15126 thiamin pyrimidine py 99.9 2.9E-26 6.2E-31 246.5 22.7 223 579-829 2-263 (272)
23 PRK10976 putative hydrolase; P 99.9 3.1E-26 6.8E-31 245.4 20.9 223 579-828 2-264 (266)
24 PRK03669 mannosyl-3-phosphogly 99.9 5.1E-25 1.1E-29 236.6 22.7 226 578-830 6-270 (271)
25 PRK01158 phosphoglycolate phos 99.9 1.1E-24 2.4E-29 228.1 23.4 212 579-828 3-229 (230)
26 PLN02887 hydrolase family prot 99.9 9.8E-25 2.1E-29 252.9 24.3 231 570-828 300-579 (580)
27 PF08282 Hydrolase_3: haloacid 99.9 2.4E-24 5.2E-29 227.0 24.6 216 582-824 1-254 (254)
28 TIGR01484 HAD-SF-IIB HAD-super 99.9 5.3E-25 1.2E-29 226.3 17.1 194 581-786 1-201 (204)
29 cd03792 GT1_Trehalose_phosphor 99.9 4.3E-24 9.2E-29 239.8 23.0 301 174-546 63-371 (372)
30 PRK10530 pyridoxal phosphate ( 99.9 9.5E-24 2.1E-28 226.7 22.7 224 578-828 2-271 (272)
31 TIGR00099 Cof-subfamily Cof su 99.9 1.8E-23 4E-28 222.7 20.4 216 581-824 1-256 (256)
32 PRK00654 glgA glycogen synthas 99.9 7.3E-23 1.6E-27 236.7 26.0 294 199-547 119-463 (466)
33 PLN02939 transferase, transfer 99.9 1.8E-22 4E-27 239.4 29.3 317 179-548 592-968 (977)
34 PLN02316 synthase/transferase 99.9 2.3E-22 5E-27 242.9 29.6 307 177-547 689-1034(1036)
35 TIGR01482 SPP-subfamily Sucros 99.9 3.8E-23 8.3E-28 215.7 19.4 211 582-827 1-224 (225)
36 TIGR01487 SPP-like sucrose-pho 99.9 6.9E-23 1.5E-27 212.5 20.5 207 579-824 1-215 (215)
37 PRK15484 lipopolysaccharide 1, 99.9 4.3E-22 9.3E-27 224.4 28.6 269 199-546 100-377 (380)
38 TIGR02472 sucr_P_syn_N sucrose 99.9 1.8E-22 3.9E-27 231.8 25.2 315 177-544 94-438 (439)
39 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.8E-22 3.8E-27 215.1 22.2 219 581-827 1-255 (256)
40 PRK14098 glycogen synthase; Pr 99.9 3.4E-22 7.3E-27 231.5 26.3 318 175-547 119-486 (489)
41 TIGR01485 SPP_plant-cyano sucr 99.9 1.1E-22 2.3E-27 215.9 18.5 222 579-827 1-246 (249)
42 TIGR02095 glgA glycogen/starch 99.9 7.5E-22 1.6E-26 228.9 25.9 291 200-545 130-471 (473)
43 PRK14099 glycogen synthase; Pr 99.9 1.5E-21 3.3E-26 225.9 27.9 297 195-548 132-480 (485)
44 TIGR03449 mycothiol_MshA UDP-N 99.9 4.2E-21 9.1E-26 217.9 29.4 287 199-547 102-402 (405)
45 cd03818 GT1_ExpC_like This fam 99.9 9.3E-22 2E-26 222.9 23.3 302 180-541 71-395 (396)
46 PRK00192 mannosyl-3-phosphogly 99.9 9.7E-22 2.1E-26 211.5 21.9 226 578-829 3-271 (273)
47 cd03796 GT1_PIG-A_like This fa 99.9 2.2E-21 4.9E-26 219.9 25.5 281 193-549 85-370 (398)
48 TIGR02471 sucr_syn_bact_C sucr 99.9 9.1E-22 2E-26 207.1 20.4 214 581-827 1-234 (236)
49 PRK15427 colanic acid biosynth 99.9 2.3E-21 5.1E-26 220.1 25.0 274 199-545 119-404 (406)
50 PTZ00174 phosphomannomutase; P 99.9 1.7E-21 3.7E-26 206.3 21.9 195 577-785 3-225 (247)
51 TIGR02463 MPGP_rel mannosyl-3- 99.9 7.3E-22 1.6E-26 205.7 17.4 195 581-786 1-217 (221)
52 TIGR02470 sucr_synth sucrose s 99.9 2.6E-20 5.6E-25 220.6 30.2 340 174-544 361-745 (784)
53 PLN02871 UDP-sulfoquinovose:DA 99.9 1.3E-20 2.7E-25 218.2 25.6 284 192-551 140-439 (465)
54 cd03791 GT1_Glycogen_synthase_ 99.9 1E-20 2.2E-25 219.6 24.9 308 179-543 111-473 (476)
55 PLN00142 sucrose synthase 99.9 5E-20 1.1E-24 218.2 28.4 333 174-544 384-768 (815)
56 TIGR02149 glgA_Coryne glycogen 99.9 6E-20 1.3E-24 206.8 27.4 285 199-547 84-387 (388)
57 TIGR03088 stp2 sugar transfera 99.9 9E-20 1.9E-24 204.6 27.0 207 297-546 160-372 (374)
58 cd03800 GT1_Sucrose_synthase T 99.9 1.2E-19 2.6E-24 204.3 26.8 284 200-541 103-397 (398)
59 cd04951 GT1_WbdM_like This fam 99.8 1.1E-19 2.5E-24 201.2 24.8 281 190-544 73-358 (360)
60 PLN02382 probable sucrose-phos 99.8 5E-20 1.1E-24 207.8 22.0 229 575-828 5-260 (413)
61 PRK14502 bifunctional mannosyl 99.8 6.8E-20 1.5E-24 211.2 23.2 204 570-785 404-652 (694)
62 cd03813 GT1_like_3 This family 99.8 1E-19 2.2E-24 211.1 23.8 300 171-542 148-472 (475)
63 cd03806 GT1_ALG11_like This fa 99.8 2.5E-19 5.4E-24 204.4 24.8 273 195-534 106-414 (419)
64 PRK15490 Vi polysaccharide bio 99.8 3.7E-19 8.1E-24 202.3 25.5 288 191-545 275-574 (578)
65 PLN02423 phosphomannomutase 99.8 2.6E-19 5.7E-24 189.1 22.5 191 579-784 7-224 (245)
66 cd05844 GT1_like_7 Glycosyltra 99.8 4E-19 8.6E-24 198.1 24.6 274 191-541 77-365 (367)
67 cd03812 GT1_CapH_like This fam 99.8 3.2E-19 6.9E-24 197.8 22.6 264 191-525 75-344 (358)
68 cd03819 GT1_WavL_like This fam 99.8 3.9E-19 8.4E-24 196.9 22.7 269 192-531 74-349 (355)
69 cd04962 GT1_like_5 This family 99.8 1.4E-18 3.1E-23 194.0 27.2 285 185-545 74-369 (371)
70 PRK15179 Vi polysaccharide bio 99.8 2.9E-19 6.2E-24 212.1 22.6 281 192-542 396-689 (694)
71 cd03805 GT1_ALG2_like This fam 99.8 1.3E-18 2.8E-23 196.2 25.8 280 199-539 95-391 (392)
72 PLN02949 transferase, transfer 99.8 2.7E-18 5.8E-23 197.2 28.0 313 149-547 109-457 (463)
73 TIGR02461 osmo_MPG_phos mannos 99.8 3.1E-19 6.7E-24 186.1 18.2 189 581-785 1-220 (225)
74 cd03809 GT1_mtfB_like This fam 99.8 1.3E-18 2.9E-23 192.2 22.0 275 195-541 84-364 (365)
75 TIGR02918 accessory Sec system 99.8 7.8E-18 1.7E-22 195.1 27.7 271 198-545 211-498 (500)
76 cd03799 GT1_amsK_like This is 99.8 6.7E-18 1.5E-22 186.6 25.8 268 193-538 76-353 (355)
77 PRK10307 putative glycosyl tra 99.8 9.9E-18 2.1E-22 191.0 27.7 282 199-547 107-408 (412)
78 cd03793 GT1_Glycogen_synthase_ 99.8 1.5E-18 3.3E-23 197.4 20.0 356 152-543 106-583 (590)
79 PRK10125 putative glycosyl tra 99.8 2E-18 4.3E-23 195.9 21.0 185 298-544 213-402 (405)
80 cd03801 GT1_YqgM_like This fam 99.8 9E-18 2E-22 183.6 25.0 286 191-544 80-373 (374)
81 cd03822 GT1_ecORF704_like This 99.8 5.7E-18 1.2E-22 187.2 23.4 283 192-544 72-365 (366)
82 PRK12702 mannosyl-3-phosphogly 99.8 1.9E-18 4.1E-23 181.4 17.9 187 579-786 1-248 (302)
83 cd03821 GT1_Bme6_like This fam 99.8 8E-18 1.7E-22 185.5 23.3 274 199-541 88-374 (375)
84 PHA01633 putative glycosyl tra 99.8 1.9E-18 4.2E-23 188.8 17.0 194 302-541 118-334 (335)
85 cd03807 GT1_WbnK_like This fam 99.8 1.8E-17 3.9E-22 181.9 24.6 282 192-543 76-363 (365)
86 cd03794 GT1_wbuB_like This fam 99.8 1.7E-17 3.6E-22 183.7 24.5 274 200-540 101-393 (394)
87 cd03814 GT1_like_2 This family 99.8 1.4E-17 3.1E-22 183.6 23.8 276 193-544 80-363 (364)
88 cd03817 GT1_UGDG_like This fam 99.8 1.4E-17 3.1E-22 183.6 23.5 270 191-532 79-362 (374)
89 cd04949 GT1_gtfA_like This fam 99.8 9.8E-18 2.1E-22 187.9 22.3 280 180-538 83-370 (372)
90 cd04946 GT1_AmsK_like This fam 99.8 3.1E-17 6.7E-22 186.7 26.5 271 196-541 125-406 (407)
91 cd03798 GT1_wlbH_like This fam 99.8 1.6E-17 3.4E-22 182.5 23.2 282 194-545 91-375 (377)
92 PF05116 S6PP: Sucrose-6F-phos 99.8 1.9E-18 4.2E-23 182.6 14.2 193 579-806 2-209 (247)
93 PLN02501 digalactosyldiacylgly 99.8 4.2E-18 9.2E-23 195.3 17.7 314 135-542 379-705 (794)
94 cd03820 GT1_amsD_like This fam 99.8 3.5E-17 7.6E-22 178.1 21.8 264 193-541 80-347 (348)
95 PLN02846 digalactosyldiacylgly 99.8 2.2E-17 4.8E-22 187.3 20.5 268 191-545 111-390 (462)
96 cd03823 GT1_ExpE7_like This fa 99.8 7.4E-17 1.6E-21 177.4 24.2 262 190-542 90-355 (359)
97 PRK09922 UDP-D-galactose:(gluc 99.8 3.3E-17 7.1E-22 183.3 20.5 240 190-514 78-326 (359)
98 cd03808 GT1_cap1E_like This fa 99.7 9.6E-17 2.1E-21 175.5 22.3 274 192-541 76-358 (359)
99 cd03816 GT1_ALG1_like This fam 99.7 1.9E-16 4.2E-21 180.6 23.6 273 199-542 96-409 (415)
100 PHA01630 putative group 1 glyc 99.7 1.9E-16 4.1E-21 174.7 20.5 211 254-545 94-329 (331)
101 cd03795 GT1_like_4 This family 99.7 2.9E-16 6.4E-21 173.7 21.0 258 200-530 85-349 (357)
102 TIGR03087 stp1 sugar transfera 99.7 1.5E-15 3.3E-20 172.2 25.1 189 298-544 197-394 (397)
103 cd03811 GT1_WabH_like This fam 99.7 4.9E-16 1.1E-20 169.2 19.8 247 193-511 78-328 (353)
104 cd03804 GT1_wbaZ_like This fam 99.7 8.7E-16 1.9E-20 170.8 21.1 244 199-538 84-348 (351)
105 cd03802 GT1_AviGT4_like This f 99.7 2.3E-15 5.1E-20 165.3 22.7 246 191-542 82-332 (335)
106 cd04955 GT1_like_6 This family 99.7 2.2E-15 4.8E-20 167.2 22.0 264 200-543 86-361 (363)
107 cd03825 GT1_wcfI_like This fam 99.7 3.7E-15 8.1E-20 165.4 20.7 193 298-545 160-363 (365)
108 PLN02275 transferase, transfer 99.7 3.2E-15 7E-20 168.1 19.3 239 195-510 99-371 (371)
109 PRK05749 3-deoxy-D-manno-octul 99.7 1.5E-14 3.2E-19 165.7 24.8 275 188-531 116-406 (425)
110 COG0297 GlgA Glycogen synthase 99.6 2.3E-14 4.9E-19 162.9 23.6 262 200-513 132-443 (487)
111 PF00534 Glycos_transf_1: Glyc 99.6 5.1E-15 1.1E-19 147.3 11.1 143 332-513 13-159 (172)
112 cd04950 GT1_like_1 Glycosyltra 99.5 2.2E-12 4.7E-17 145.3 22.5 266 195-545 99-370 (373)
113 COG3769 Predicted hydrolase (H 99.5 1E-12 2.2E-17 129.7 16.4 192 578-786 6-231 (274)
114 KOG1111 N-acetylglucosaminyltr 99.5 1.2E-13 2.5E-18 145.8 9.1 188 272-511 145-334 (426)
115 PLN02605 monogalactosyldiacylg 99.4 5E-11 1.1E-15 134.7 23.7 191 298-542 174-377 (382)
116 KOG0853 Glycosyltransferase [C 99.3 1.4E-10 3E-15 130.4 18.5 185 334-549 273-466 (495)
117 cd01635 Glycosyltransferase_GT 99.2 2.4E-10 5.2E-15 117.2 15.3 112 339-488 109-220 (229)
118 COG0438 RfaG Glycosyltransfera 99.2 5.6E-10 1.2E-14 120.4 17.1 198 298-546 173-376 (381)
119 PRK13609 diacylglycerol glucos 99.2 4.6E-09 1E-13 118.5 23.7 271 183-547 91-372 (380)
120 PRK00726 murG undecaprenyldiph 99.1 1.6E-09 3.5E-14 121.1 19.3 257 190-544 85-355 (357)
121 cd03785 GT1_MurG MurG is an N- 99.1 3E-09 6.5E-14 118.2 21.2 248 188-534 81-345 (350)
122 TIGR01133 murG undecaprenyldip 99.0 5.1E-09 1.1E-13 116.3 17.9 181 300-538 153-346 (348)
123 TIGR00236 wecB UDP-N-acetylglu 99.0 1.3E-08 2.8E-13 114.2 20.8 252 185-513 76-335 (365)
124 PRK13608 diacylglycerol glucos 99.0 1.9E-08 4.1E-13 114.1 21.7 271 188-551 96-376 (391)
125 TIGR01670 YrbI-phosphatas 3-de 99.0 1.2E-09 2.7E-14 107.2 9.6 72 745-831 76-152 (154)
126 cd03786 GT1_UDP-GlcNAc_2-Epime 99.0 2.5E-08 5.5E-13 111.4 20.4 252 184-514 77-339 (363)
127 PRK09484 3-deoxy-D-manno-octul 98.9 2.7E-09 5.9E-14 107.9 9.4 124 577-815 19-153 (183)
128 KOG3189 Phosphomannomutase [Li 98.9 2.2E-08 4.7E-13 97.8 13.6 197 573-782 5-228 (252)
129 TIGR02094 more_P_ylases alpha- 98.9 1.8E-07 3.9E-12 110.5 24.1 181 333-543 388-597 (601)
130 PF03332 PMM: Eukaryotic phosp 98.9 6.1E-08 1.3E-12 98.1 15.4 190 605-828 2-219 (220)
131 PRK11133 serB phosphoserine ph 98.9 2.9E-08 6.4E-13 108.7 14.2 67 744-826 247-317 (322)
132 PRK00025 lpxB lipid-A-disaccha 98.8 2.2E-07 4.7E-12 104.8 19.4 140 326-513 175-342 (380)
133 cd01427 HAD_like Haloacid deha 98.8 1.5E-08 3.2E-13 95.6 8.4 56 581-637 1-61 (139)
134 PF13692 Glyco_trans_1_4: Glyc 98.8 1E-08 2.2E-13 97.6 6.6 128 334-511 2-134 (135)
135 KOG1387 Glycosyltransferase [C 98.7 3.2E-07 7E-12 97.0 16.1 182 333-546 268-458 (465)
136 TIGR02726 phenyl_P_delta pheny 98.7 5.3E-08 1.1E-12 96.8 9.5 138 578-828 6-155 (169)
137 PRK09814 beta-1,6-galactofuran 98.7 7.8E-07 1.7E-11 98.7 18.0 252 191-542 58-327 (333)
138 TIGR03713 acc_sec_asp1 accesso 98.7 1.6E-06 3.6E-11 101.1 21.4 237 198-513 224-489 (519)
139 cd04299 GT1_Glycogen_Phosphory 98.5 4.2E-06 9.1E-11 100.9 21.0 181 335-545 479-688 (778)
140 smart00775 LNS2 LNS2 domain. T 98.5 2.7E-07 5.8E-12 90.8 6.6 70 581-651 1-88 (157)
141 COG1778 Low specificity phosph 98.4 7.2E-07 1.6E-11 84.7 6.5 56 745-815 83-140 (170)
142 PF05693 Glycogen_syn: Glycoge 98.3 1.1E-05 2.4E-10 92.7 15.9 102 422-542 461-577 (633)
143 TIGR00338 serB phosphoserine p 98.3 5.8E-06 1.3E-10 85.8 12.5 62 745-823 152-218 (219)
144 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.3 1.5E-05 3.3E-10 85.0 15.9 49 580-632 2-53 (257)
145 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.3 6.4E-06 1.4E-10 87.5 12.9 66 580-650 2-74 (249)
146 COG0560 SerB Phosphoserine pho 98.3 5.1E-06 1.1E-10 85.9 11.2 45 739-786 138-182 (212)
147 COG1519 KdtA 3-deoxy-D-manno-o 98.2 0.00042 9.2E-09 76.8 25.8 300 181-531 32-404 (419)
148 TIGR01488 HAD-SF-IB Haloacid D 98.2 3.9E-06 8.6E-11 83.8 8.6 41 740-783 137-177 (177)
149 PRK10444 UMP phosphatase; Prov 98.2 3.8E-05 8.3E-10 81.5 15.7 54 579-637 1-54 (248)
150 TIGR00215 lpxB lipid-A-disacch 98.1 0.00021 4.6E-09 81.0 21.1 134 333-513 190-348 (385)
151 TIGR01452 PGP_euk phosphoglyco 98.1 4.4E-05 9.6E-10 82.5 13.8 51 579-634 2-52 (279)
152 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.1 6.1E-05 1.3E-09 76.8 13.6 38 745-785 147-184 (201)
153 TIGR01689 EcbF-BcbF capsule bi 98.0 7.9E-06 1.7E-10 76.8 5.6 51 580-631 2-55 (126)
154 PLN02954 phosphoserine phospha 98.0 7.8E-05 1.7E-09 77.6 13.6 66 742-824 152-223 (224)
155 TIGR01684 viral_ppase viral ph 98.0 1.5E-05 3.4E-10 84.5 7.5 72 578-653 125-202 (301)
156 PLN02645 phosphoglycolate phos 98.0 8.5E-05 1.8E-09 81.6 13.4 54 578-636 27-80 (311)
157 PF13524 Glyco_trans_1_2: Glyc 97.8 3.3E-05 7.2E-10 68.6 6.2 87 433-541 1-91 (92)
158 PRK13223 phosphoglycolate phos 97.8 0.00022 4.8E-09 76.8 13.4 71 741-825 154-230 (272)
159 PRK09552 mtnX 2-hydroxy-3-keto 97.8 0.00029 6.3E-09 73.3 13.9 66 743-829 146-217 (219)
160 PRK13225 phosphoglycolate phos 97.8 0.00056 1.2E-08 73.7 15.5 70 745-828 196-271 (273)
161 TIGR02919 accessory Sec system 97.7 0.00022 4.8E-09 81.6 12.6 132 331-514 281-413 (438)
162 PRK06769 hypothetical protein; 97.7 0.00025 5.5E-09 71.0 11.4 49 577-626 2-54 (173)
163 PRK13226 phosphoglycolate phos 97.7 0.00036 7.8E-09 73.1 12.0 66 746-825 153-225 (229)
164 PRK08942 D,D-heptose 1,7-bisph 97.6 0.00057 1.2E-08 68.8 12.3 66 747-826 106-178 (181)
165 PRK13288 pyrophosphatase PpaX; 97.6 0.00029 6.2E-09 72.9 10.3 70 743-826 137-212 (214)
166 PRK13222 phosphoglycolate phos 97.6 0.0011 2.3E-08 69.0 14.2 67 746-826 151-223 (226)
167 PHA03398 viral phosphatase sup 97.6 0.00014 3.1E-09 77.4 7.1 72 578-653 127-204 (303)
168 COG0546 Gph Predicted phosphat 97.6 0.00053 1.1E-08 71.4 11.3 65 748-826 149-219 (220)
169 TIGR03333 salvage_mtnX 2-hydro 97.4 0.0022 4.7E-08 66.5 13.4 65 743-828 142-212 (214)
170 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0019 4E-08 76.9 10.7 64 573-637 358-422 (556)
171 PRK10826 2-deoxyglucose-6-phos 97.1 0.005 1.1E-07 64.1 12.7 63 745-821 149-216 (222)
172 TIGR01656 Histidinol-ppas hist 97.1 0.0022 4.7E-08 62.4 9.2 47 580-627 1-54 (147)
173 TIGR00213 GmhB_yaeD D,D-heptos 97.1 0.0033 7.2E-08 63.0 10.6 63 746-821 108-175 (176)
174 PRK10671 copA copper exporting 97.1 0.0032 6.9E-08 78.5 12.4 65 572-637 623-687 (834)
175 TIGR01681 HAD-SF-IIIC HAD-supe 97.0 0.00087 1.9E-08 63.6 5.4 55 580-635 1-65 (128)
176 TIGR01489 DKMTPPase-SF 2,3-dik 97.0 0.0035 7.6E-08 62.9 10.2 40 740-785 144-183 (188)
177 TIGR01261 hisB_Nterm histidino 97.0 0.0046 1E-07 61.1 9.9 38 746-786 105-142 (161)
178 TIGR01497 kdpB K+-transporting 96.9 0.005 1.1E-07 73.9 11.4 69 569-638 416-484 (675)
179 TIGR01512 ATPase-IB2_Cd heavy 96.9 0.0037 8E-08 74.0 10.2 60 577-637 340-400 (536)
180 TIGR03351 PhnX-like phosphonat 96.9 0.0055 1.2E-07 63.5 10.2 66 745-824 146-219 (220)
181 TIGR01662 HAD-SF-IIIA HAD-supe 96.9 0.00064 1.4E-08 64.6 2.9 57 580-637 1-70 (132)
182 PLN02575 haloacid dehalogenase 96.9 0.03 6.5E-07 62.7 16.3 70 746-829 274-347 (381)
183 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.9 0.02 4.3E-07 60.5 14.4 55 578-637 7-63 (242)
184 TIGR01672 AphA HAD superfamily 96.8 0.0027 5.8E-08 66.7 7.3 70 565-635 49-153 (237)
185 PLN02770 haloacid dehalogenase 96.8 0.0079 1.7E-07 63.9 10.4 70 746-829 166-242 (248)
186 PLN02779 haloacid dehalogenase 96.7 0.0099 2.1E-07 64.6 10.5 61 746-820 204-268 (286)
187 TIGR01686 FkbH FkbH-like domai 96.7 0.012 2.7E-07 64.9 11.3 58 578-636 2-67 (320)
188 PLN03243 haloacid dehalogenase 96.6 0.054 1.2E-06 57.9 15.5 68 746-828 167-239 (260)
189 TIGR01511 ATPase-IB1_Cu copper 96.5 0.01 2.2E-07 70.6 10.4 61 576-637 382-442 (562)
190 PRK11033 zntA zinc/cadmium/mer 96.5 0.015 3.3E-07 71.4 11.6 66 572-638 541-606 (741)
191 PRK08238 hypothetical protein; 96.5 0.015 3.2E-07 67.5 10.9 36 601-637 74-109 (479)
192 TIGR01990 bPGM beta-phosphoglu 96.5 0.046 9.9E-07 54.8 13.1 38 745-785 142-179 (185)
193 TIGR01522 ATPase-IIA2_Ca golgi 96.3 0.022 4.9E-07 71.4 12.2 164 572-825 496-671 (884)
194 TIGR01664 DNA-3'-Pase DNA 3'-p 96.3 0.0045 9.7E-08 61.6 4.8 49 578-627 12-69 (166)
195 PRK11587 putative phosphatase; 96.3 0.006 1.3E-07 63.3 5.9 61 746-820 140-203 (218)
196 PF06437 ISN1: IMP-specific 5' 96.3 0.29 6.2E-06 53.8 18.5 198 565-773 133-378 (408)
197 COG0647 NagD Predicted sugar p 96.2 0.072 1.6E-06 56.9 13.2 54 578-636 7-63 (269)
198 KOG3120 Predicted haloacid deh 96.1 0.036 7.9E-07 56.2 10.0 48 735-782 153-201 (256)
199 PRK01122 potassium-transportin 96.0 0.038 8.3E-07 66.6 11.3 67 571-638 417-483 (679)
200 COG2179 Predicted hydrolase of 96.0 0.022 4.7E-07 55.5 7.3 67 565-638 18-84 (175)
201 PF00702 Hydrolase: haloacid d 96.0 0.027 5.8E-07 57.6 8.7 39 599-638 127-165 (215)
202 PF13344 Hydrolase_6: Haloacid 95.9 0.002 4.4E-08 58.5 0.0 51 582-637 1-54 (101)
203 PRK14010 potassium-transportin 95.9 0.057 1.2E-06 65.1 12.1 71 567-638 409-479 (673)
204 TIGR02253 CTE7 HAD superfamily 95.9 0.027 5.9E-07 58.2 8.5 38 746-786 152-190 (221)
205 TIGR01106 ATPase-IIC_X-K sodiu 95.8 0.11 2.4E-06 66.0 14.7 41 597-638 566-606 (997)
206 PLN02940 riboflavin kinase 95.7 0.078 1.7E-06 60.0 11.7 61 746-820 152-216 (382)
207 PTZ00445 p36-lilke protein; Pr 95.7 0.017 3.7E-07 58.7 5.6 158 566-785 30-199 (219)
208 PF08323 Glyco_transf_5: Starc 95.7 0.043 9.3E-07 58.2 8.9 85 186-271 118-232 (245)
209 TIGR01517 ATPase-IIB_Ca plasma 95.6 0.073 1.6E-06 67.3 12.1 138 597-824 577-721 (941)
210 PF12710 HAD: haloacid dehalog 95.6 0.019 4.1E-07 57.8 5.7 35 602-637 92-126 (192)
211 TIGR01116 ATPase-IIA1_Ca sarco 95.6 0.092 2E-06 66.2 12.8 41 597-638 535-575 (917)
212 PRK10517 magnesium-transportin 95.5 0.086 1.9E-06 66.1 12.2 136 597-824 548-689 (902)
213 KOG0210 P-type ATPase [Inorgan 95.5 0.14 3.1E-06 59.6 12.3 67 740-825 763-833 (1051)
214 TIGR01668 YqeG_hyp_ppase HAD s 95.3 0.03 6.6E-07 55.8 6.0 56 576-634 22-78 (170)
215 KOG2941 Beta-1,4-mannosyltrans 95.3 0.47 1E-05 51.5 15.0 166 333-544 254-436 (444)
216 PRK15122 magnesium-transportin 95.3 0.12 2.7E-06 64.8 12.6 137 597-825 548-690 (903)
217 KOG1615 Phosphoserine phosphat 95.3 0.012 2.6E-07 58.4 2.6 58 745-820 159-221 (227)
218 TIGR01657 P-ATPase-V P-type AT 95.2 0.19 4.2E-06 64.3 14.2 39 598-637 655-693 (1054)
219 TIGR01524 ATPase-IIIB_Mg magne 95.2 0.14 3.1E-06 64.1 12.5 137 597-825 513-655 (867)
220 TIGR01428 HAD_type_II 2-haloal 95.2 0.051 1.1E-06 55.3 7.2 37 746-785 150-186 (198)
221 PRK11009 aphA acid phosphatase 95.1 0.048 1E-06 57.4 6.9 62 565-627 49-141 (237)
222 TIGR01675 plant-AP plant acid 95.0 0.044 9.5E-07 57.1 6.1 60 577-637 75-160 (229)
223 PHA02530 pseT polynucleotide k 95.0 0.046 1E-06 59.6 6.6 58 578-636 157-223 (300)
224 TIGR01647 ATPase-IIIA_H plasma 94.9 0.25 5.4E-06 61.0 13.5 167 572-825 410-587 (755)
225 COG4087 Soluble P-type ATPase 94.8 0.041 8.8E-07 51.3 4.7 54 761-827 90-149 (152)
226 COG0474 MgtA Cation transport 94.8 0.15 3.3E-06 64.1 11.5 42 596-638 544-585 (917)
227 COG0763 LpxB Lipid A disacchar 94.8 1.7 3.6E-05 48.4 17.7 293 175-542 69-376 (381)
228 PF02684 LpxB: Lipid-A-disacch 94.7 2.1 4.6E-05 48.2 19.0 252 194-515 80-343 (373)
229 PLN03190 aminophospholipid tra 94.7 0.31 6.8E-06 62.7 13.9 40 597-637 724-763 (1178)
230 TIGR01460 HAD-SF-IIA Haloacid 94.6 0.032 6.9E-07 58.8 4.1 50 582-636 1-53 (236)
231 TIGR02137 HSK-PSP phosphoserin 94.6 0.059 1.3E-06 55.4 5.8 65 742-827 129-198 (203)
232 TIGR01652 ATPase-Plipid phosph 94.5 0.15 3.3E-06 65.4 10.5 185 597-824 629-819 (1057)
233 TIGR01680 Veg_Stor_Prot vegeta 94.4 0.073 1.6E-06 56.5 6.0 50 578-628 100-173 (275)
234 TIGR01685 MDP-1 magnesium-depe 94.4 0.056 1.2E-06 54.1 5.0 58 579-637 2-83 (174)
235 PF08645 PNK3P: Polynucleotide 94.3 0.027 5.9E-07 55.5 2.5 44 580-624 1-53 (159)
236 TIGR01523 ATPase-IID_K-Na pota 94.2 0.19 4.1E-06 64.1 10.2 41 597-638 644-684 (1053)
237 TIGR01494 ATPase_P-type ATPase 94.0 0.29 6.3E-06 57.5 10.8 60 577-637 325-384 (499)
238 TIGR01663 PNK-3'Pase polynucle 93.9 0.067 1.5E-06 62.6 5.0 50 577-627 166-224 (526)
239 TIGR01533 lipo_e_P4 5'-nucleot 93.8 0.055 1.2E-06 57.9 3.8 59 577-636 73-157 (266)
240 TIGR01454 AHBA_synth_RP 3-amin 93.8 0.17 3.8E-06 51.7 7.4 67 745-825 132-204 (205)
241 TIGR01490 HAD-SF-IB-hyp1 HAD-s 93.8 0.067 1.4E-06 54.5 4.2 43 741-786 151-193 (202)
242 PF09419 PGP_phosphatase: Mito 93.7 0.092 2E-06 52.1 5.0 37 574-612 36-72 (168)
243 PF13439 Glyco_transf_4: Glyco 93.5 0.37 7.9E-06 46.8 8.9 100 188-312 72-177 (177)
244 TIGR03492 conserved hypothetic 93.4 0.54 1.2E-05 53.6 11.3 138 334-512 207-364 (396)
245 TIGR01449 PGP_bact 2-phosphogl 93.2 0.16 3.5E-06 52.0 6.2 64 746-823 143-212 (213)
246 PF13844 Glyco_transf_41: Glyc 93.2 0.97 2.1E-05 52.1 12.7 132 303-455 249-385 (468)
247 PRK13582 thrH phosphoserine ph 93.0 0.17 3.8E-06 51.6 5.9 65 744-829 131-200 (205)
248 TIGR03568 NeuC_NnaA UDP-N-acet 92.6 4.4 9.6E-05 45.6 17.0 71 413-511 264-338 (365)
249 smart00577 CPDc catalytic doma 92.4 0.16 3.6E-06 49.3 4.6 58 578-637 1-81 (148)
250 KOG3040 Predicted sugar phosph 92.3 0.93 2E-05 45.8 9.6 55 577-636 5-59 (262)
251 PLN02919 haloacid dehalogenase 92.2 0.79 1.7E-05 58.7 11.5 61 746-820 220-285 (1057)
252 PF08235 LNS2: LNS2 (Lipin/Ned 92.2 0.18 3.9E-06 49.3 4.4 56 581-637 1-67 (157)
253 PF13242 Hydrolase_like: HAD-h 92.1 0.45 9.7E-06 40.4 6.3 58 748-819 8-74 (75)
254 PRK05446 imidazole glycerol-ph 92.0 0.15 3.3E-06 56.7 4.2 47 578-625 1-55 (354)
255 PF02350 Epimerase_2: UDP-N-ac 91.6 12 0.00026 41.8 18.7 254 185-512 57-318 (346)
256 COG0381 WecB UDP-N-acetylgluco 91.2 25 0.00054 39.4 20.1 137 334-515 205-344 (383)
257 PF03767 Acid_phosphat_B: HAD 91.2 0.025 5.4E-07 59.3 -3.0 52 577-629 70-144 (229)
258 TIGR01545 YfhB_g-proteo haloac 91.0 0.48 1E-05 49.0 6.4 22 765-786 176-197 (210)
259 PRK13582 thrH phosphoserine ph 90.8 0.24 5.2E-06 50.6 3.9 35 602-638 71-105 (205)
260 TIGR01490 HAD-SF-IB-hyp1 HAD-s 90.5 0.38 8.2E-06 48.9 5.1 37 601-638 89-125 (202)
261 TIGR01456 CECR5 HAD-superfamil 90.4 0.42 9E-06 52.8 5.6 49 581-634 2-57 (321)
262 PF11019 DUF2608: Protein of u 90.2 3.9 8.4E-05 43.5 12.6 55 740-805 157-212 (252)
263 COG3882 FkbH Predicted enzyme 90.1 0.72 1.6E-05 52.2 7.0 72 566-638 209-293 (574)
264 COG0707 MurG UDP-N-acetylgluco 90.0 34 0.00073 38.4 20.3 150 333-532 182-342 (357)
265 PF05152 DUF705: Protein of un 89.8 0.96 2.1E-05 48.1 7.3 60 577-637 120-179 (297)
266 KOG0206 P-type ATPase [General 89.1 2 4.4E-05 54.4 10.7 46 735-786 771-816 (1151)
267 PF12689 Acid_PPase: Acid Phos 89.1 2.2 4.7E-05 42.5 9.0 45 735-784 100-144 (169)
268 COG0637 Predicted phosphatase/ 89.0 0.57 1.2E-05 48.8 5.1 26 761-786 156-181 (221)
269 PRK13478 phosphonoacetaldehyde 88.8 1.2 2.6E-05 47.7 7.5 69 746-828 160-258 (267)
270 PRK14988 GMP/IMP nucleotidase; 88.1 0.64 1.4E-05 48.5 4.8 67 748-827 153-221 (224)
271 PF06888 Put_Phosphatase: Puta 87.2 0.58 1.3E-05 49.1 3.7 79 739-828 144-234 (234)
272 TIGR02137 HSK-PSP phosphoserin 87.2 0.65 1.4E-05 47.7 4.1 37 600-638 69-105 (203)
273 cd03784 GT1_Gtf_like This fami 86.9 49 0.0011 37.3 19.6 72 414-511 291-371 (401)
274 KOG0202 Ca2+ transporting ATPa 86.8 6 0.00013 48.0 12.0 57 573-637 565-621 (972)
275 TIGR01422 phosphonatase phosph 86.7 1.7 3.6E-05 46.1 7.0 65 746-824 158-252 (253)
276 TIGR01549 HAD-SF-IA-v1 haloaci 86.6 0.71 1.5E-05 44.7 3.8 35 746-784 120-154 (154)
277 TIGR02245 HAD_IIID1 HAD-superf 86.1 1.1 2.5E-05 45.5 5.1 60 576-637 18-81 (195)
278 PF03031 NIF: NLI interacting 84.8 0.56 1.2E-05 45.9 2.1 56 580-637 1-72 (159)
279 COG0241 HisB Histidinol phosph 84.1 1.1 2.4E-05 44.9 3.8 46 579-625 5-56 (181)
280 PF13579 Glyco_trans_4_4: Glyc 83.8 1.1 2.4E-05 42.6 3.7 68 199-271 74-146 (160)
281 PF06941 NT5C: 5' nucleotidase 83.5 0.92 2E-05 46.0 3.1 28 600-628 74-101 (191)
282 PRK14988 GMP/IMP nucleotidase; 83.2 2.8 6.1E-05 43.6 6.7 15 578-592 9-23 (224)
283 TIGR01426 MGT glycosyltransfer 83.2 10 0.00022 42.8 11.8 97 414-538 278-384 (392)
284 TIGR02250 FCP1_euk FCP1-like p 82.3 2.2 4.8E-05 41.9 5.1 61 576-638 3-95 (156)
285 TIGR02251 HIF-SF_euk Dullard-l 82.3 2.1 4.5E-05 42.3 5.0 57 579-637 1-78 (162)
286 COG4359 Uncharacterized conser 81.3 2.3 4.9E-05 42.4 4.6 38 741-785 143-180 (220)
287 PRK10725 fructose-1-P/6-phosph 81.2 0.79 1.7E-05 45.9 1.6 38 745-785 143-180 (188)
288 KOG3109 Haloacid dehalogenase- 81.0 1.9 4E-05 44.2 4.0 58 749-822 165-225 (244)
289 KOG1050 Trehalose-6-phosphate 80.8 0.13 2.9E-06 62.1 -4.8 218 559-784 167-423 (732)
290 TIGR03590 PseG pseudaminic aci 80.7 4.5 9.8E-05 43.7 7.3 93 333-456 170-262 (279)
291 PRK11590 hypothetical protein; 80.4 2.1 4.5E-05 44.1 4.4 38 743-786 161-198 (211)
292 COG2217 ZntA Cation transport 80.4 3.1 6.8E-05 50.6 6.5 90 711-825 541-652 (713)
293 TIGR01545 YfhB_g-proteo haloac 79.3 2.2 4.8E-05 44.0 4.2 16 578-593 4-19 (210)
294 PF07429 Glyco_transf_56: 4-al 78.8 12 0.00026 41.3 9.6 126 333-494 184-311 (360)
295 COG4030 Uncharacterized protei 78.3 2.2 4.8E-05 43.7 3.6 38 745-786 191-228 (315)
296 TIGR02252 DREG-2 REG-2-like, H 78.0 1.3 2.9E-05 44.9 2.1 36 747-785 163-199 (203)
297 PF06888 Put_Phosphatase: Puta 76.7 5.2 0.00011 42.0 6.0 36 601-636 73-109 (234)
298 PRK09449 dUMP phosphatase; Pro 75.8 8.5 0.00018 39.7 7.4 65 747-825 153-223 (224)
299 TIGR02009 PGMB-YQAB-SF beta-ph 75.5 1.3 2.9E-05 44.1 1.2 37 746-785 144-180 (185)
300 PRK10748 flavin mononucleotide 75.5 1.6 3.5E-05 45.8 2.0 37 746-785 165-202 (238)
301 PRK10563 6-phosphogluconate ph 74.9 2.4 5.3E-05 43.7 3.1 39 745-786 143-181 (221)
302 TIGR01548 HAD-SF-IA-hyp1 haloa 74.6 1.4 3E-05 44.8 1.1 34 746-782 163-196 (197)
303 TIGR01544 HAD-SF-IE haloacid d 74.5 3.1 6.8E-05 44.7 3.8 37 744-783 191-230 (277)
304 COG0816 Predicted endonuclease 74.5 16 0.00035 35.2 8.2 72 352-433 41-112 (141)
305 TIGR01422 phosphonatase phosph 73.9 2.8 6.1E-05 44.3 3.3 15 578-592 1-15 (253)
306 PRK14089 ipid-A-disaccharide s 73.7 1.6E+02 0.0034 33.0 17.4 28 424-456 229-256 (347)
307 COG4996 Predicted phosphatase 72.5 8.9 0.00019 36.1 5.6 58 580-638 1-79 (164)
308 PHA02597 30.2 hypothetical pro 72.5 1.8 3.8E-05 43.9 1.3 60 746-821 132-195 (197)
309 COG3700 AphA Acid phosphatase 71.8 7.5 0.00016 38.5 5.2 68 565-632 49-146 (237)
310 PRK13478 phosphonoacetaldehyde 70.7 3.6 7.7E-05 44.0 3.2 15 578-592 3-17 (267)
311 PRK06698 bifunctional 5'-methy 70.4 12 0.00026 43.5 7.7 66 746-827 387-456 (459)
312 TIGR02254 YjjG/YfnB HAD superf 70.0 2.6 5.6E-05 43.3 1.9 66 746-824 154-224 (224)
313 TIGR01993 Pyr-5-nucltdase pyri 69.6 3.8 8.3E-05 40.9 3.0 37 746-785 143-179 (184)
314 COG1011 Predicted hydrolase (H 69.6 13 0.00028 38.3 7.0 63 748-826 158-228 (229)
315 PF12000 Glyco_trans_4_3: Gkyc 69.6 32 0.00068 34.4 9.3 51 176-228 42-94 (171)
316 PF06258 Mito_fiss_Elm1: Mitoc 68.7 20 0.00043 39.5 8.5 101 333-456 146-251 (311)
317 PRK09449 dUMP phosphatase; Pro 68.6 3.3 7.1E-05 42.8 2.3 15 578-592 2-16 (224)
318 PHA02597 30.2 hypothetical pro 67.7 8.7 0.00019 38.8 5.2 22 765-786 121-142 (197)
319 PF13419 HAD_2: Haloacid dehal 66.0 11 0.00024 36.4 5.4 38 745-785 134-171 (176)
320 KOG1618 Predicted phosphatase 65.1 7.5 0.00016 42.0 4.1 43 577-623 33-78 (389)
321 TIGR01549 HAD-SF-IA-v1 haloaci 63.1 9.1 0.0002 36.8 4.1 27 581-614 1-27 (154)
322 TIGR01662 HAD-SF-IIIA HAD-supe 62.9 7.8 0.00017 36.4 3.5 38 745-785 86-125 (132)
323 KOG2134 Polynucleotide kinase 62.7 6.2 0.00014 43.8 3.0 48 576-624 72-128 (422)
324 TIGR02254 YjjG/YfnB HAD superf 62.4 17 0.00037 37.2 6.3 14 579-592 1-14 (224)
325 COG5083 SMP2 Uncharacterized p 61.8 4.8 0.0001 45.1 2.0 71 576-650 372-450 (580)
326 KOG0208 Cation transport ATPas 61.3 49 0.0011 41.2 10.3 72 565-637 650-742 (1140)
327 COG2503 Predicted secreted aci 60.1 6.8 0.00015 40.8 2.6 53 576-629 76-151 (274)
328 TIGR02009 PGMB-YQAB-SF beta-ph 59.1 11 0.00025 37.2 4.1 32 579-617 1-32 (185)
329 TIGR01493 HAD-SF-IA-v2 Haloaci 58.8 3.6 7.8E-05 40.6 0.4 32 747-781 142-173 (175)
330 COG4087 Soluble P-type ATPase 58.7 7.4 0.00016 36.7 2.4 49 582-636 17-65 (152)
331 KOG2116 Protein involved in pl 58.7 12 0.00026 44.2 4.6 77 577-654 528-615 (738)
332 PF00343 Phosphorylase: Carboh 57.2 2E+02 0.0043 35.3 14.5 136 333-488 443-582 (713)
333 PRK10748 flavin mononucleotide 56.5 28 0.00061 36.4 6.8 15 578-592 9-23 (238)
334 COG3914 Spy Predicted O-linked 54.7 1.2E+02 0.0025 35.9 11.5 101 335-454 431-531 (620)
335 PRK06698 bifunctional 5'-methy 54.3 5.9 0.00013 46.1 1.2 30 579-611 241-270 (459)
336 PRK14986 glycogen phosphorylas 53.5 2E+02 0.0043 35.8 13.8 136 333-488 542-681 (815)
337 TIGR02247 HAD-1A3-hyp Epoxide 52.9 7.5 0.00016 39.7 1.6 36 747-785 155-190 (211)
338 TIGR01509 HAD-SF-IA-v3 haloaci 52.8 25 0.00054 34.6 5.4 36 747-785 143-178 (183)
339 COG4641 Uncharacterized protei 52.7 37 0.0008 37.9 6.9 114 412-546 239-361 (373)
340 PRK10725 fructose-1-P/6-phosph 51.5 22 0.00048 35.3 4.8 34 577-617 3-36 (188)
341 PF13477 Glyco_trans_4_2: Glyc 50.9 21 0.00046 33.3 4.3 40 189-230 67-107 (139)
342 PRK02797 4-alpha-L-fucosyltran 50.7 71 0.0015 34.9 8.5 99 333-448 145-245 (322)
343 KOG0207 Cation transport ATPas 50.6 24 0.00051 43.6 5.4 67 736-825 766-838 (951)
344 COG1168 MalY Bifunctional PLP- 50.6 2.7E+02 0.0058 31.3 13.0 90 353-449 147-240 (388)
345 PLN02811 hydrolase 50.6 27 0.00059 36.0 5.4 38 748-785 141-178 (220)
346 COG1011 Predicted hydrolase (H 49.6 9.8 0.00021 39.1 1.9 17 577-593 2-18 (229)
347 KOG2884 26S proteasome regulat 49.1 2E+02 0.0043 29.7 10.7 48 474-525 186-238 (259)
348 TIGR01548 HAD-SF-IA-hyp1 haloa 49.0 20 0.00044 36.2 4.1 12 581-592 2-13 (197)
349 KOG2882 p-Nitrophenyl phosphat 47.6 14 0.0003 39.8 2.6 56 577-637 20-75 (306)
350 PRK10563 6-phosphogluconate ph 46.7 18 0.00038 37.2 3.3 15 578-592 3-17 (221)
351 cd04248 AAK_AK-Ectoine AAK_AK- 46.0 82 0.0018 34.4 8.2 56 565-625 143-198 (304)
352 PF09949 DUF2183: Uncharacteri 45.9 51 0.0011 29.8 5.6 34 350-387 49-82 (100)
353 PRK04128 1-(5-phosphoribosyl)- 45.9 51 0.0011 34.5 6.5 62 566-635 31-93 (228)
354 PRK09456 ?-D-glucose-1-phospha 45.5 27 0.00059 35.3 4.4 38 745-785 142-179 (199)
355 TIGR01681 HAD-SF-IIIC HAD-supe 45.1 32 0.00069 32.3 4.5 34 745-781 90-125 (128)
356 TIGR02252 DREG-2 REG-2-like, H 44.7 25 0.00054 35.5 4.0 13 580-592 1-13 (203)
357 TIGR01668 YqeG_hyp_ppase HAD s 43.2 35 0.00075 33.8 4.6 38 745-785 92-130 (170)
358 TIGR01691 enolase-ppase 2,3-di 42.8 40 0.00086 35.1 5.1 38 746-786 154-191 (220)
359 PF12710 HAD: haloacid dehalog 41.9 14 0.0003 36.8 1.5 36 745-781 157-192 (192)
360 PHA02530 pseT polynucleotide k 41.7 45 0.00098 36.1 5.7 40 744-786 251-291 (300)
361 PF04312 DUF460: Protein of un 39.7 30 0.00065 33.0 3.2 52 580-635 44-97 (138)
362 PF00702 Hydrolase: haloacid d 39.0 10 0.00023 38.3 0.1 33 749-784 183-215 (215)
363 TIGR01993 Pyr-5-nucltdase pyri 38.9 38 0.00083 33.6 4.2 12 581-592 2-13 (184)
364 TIGR02247 HAD-1A3-hyp Epoxide 38.8 74 0.0016 32.3 6.4 14 579-592 2-15 (211)
365 COG3660 Predicted nucleoside-d 38.6 2.1E+02 0.0047 30.6 9.5 51 200-267 72-122 (329)
366 TIGR00250 RNAse_H_YqgF RNAse H 37.9 1.7E+02 0.0036 27.8 8.1 71 351-431 35-105 (130)
367 cd04300 GT1_Glycogen_Phosphory 37.0 3.9E+02 0.0084 33.4 12.8 105 333-439 529-637 (797)
368 PLN02177 glycerol-3-phosphate 36.2 37 0.00081 39.9 4.1 35 745-786 176-210 (497)
369 PRK13587 1-(5-phosphoribosyl)- 33.9 5.7E+02 0.012 26.7 14.5 62 566-635 32-96 (234)
370 smart00577 CPDc catalytic doma 33.8 24 0.00052 34.1 1.7 31 751-784 105-135 (148)
371 TIGR01493 HAD-SF-IA-v2 Haloaci 33.0 39 0.00085 33.1 3.2 25 581-612 1-25 (175)
372 KOG4549 Magnesium-dependent ph 32.9 62 0.0013 30.5 4.0 56 579-635 18-80 (144)
373 TIGR01685 MDP-1 magnesium-depe 32.7 74 0.0016 31.8 5.0 41 745-785 108-151 (174)
374 KOG4626 O-linked N-acetylgluco 32.7 3.3E+02 0.0072 32.7 10.6 168 350-551 773-945 (966)
375 COG2248 Predicted hydrolase (m 32.1 5.7E+02 0.012 27.3 11.2 59 332-401 174-239 (304)
376 TIGR01456 CECR5 HAD-superfamil 31.6 87 0.0019 34.5 5.9 49 763-824 262-320 (321)
377 PRK00109 Holliday junction res 30.5 2.5E+02 0.0053 26.9 8.0 71 352-432 42-112 (138)
378 PRK05446 imidazole glycerol-ph 30.0 59 0.0013 36.4 4.2 41 743-786 103-143 (354)
379 COG2179 Predicted hydrolase of 28.4 52 0.0011 32.6 2.9 34 742-778 91-125 (175)
380 TIGR01454 AHBA_synth_RP 3-amin 28.3 50 0.0011 33.4 3.1 39 599-638 75-113 (205)
381 PRK11590 hypothetical protein; 27.9 68 0.0015 32.9 4.0 44 602-646 98-145 (211)
382 KOG0204 Calcium transporting A 27.6 87 0.0019 38.6 5.1 65 740-825 721-792 (1034)
383 PF13419 HAD_2: Haloacid dehal 27.4 36 0.00077 32.7 1.7 39 599-638 77-115 (176)
384 smart00775 LNS2 LNS2 domain. T 26.9 1.3E+02 0.0029 29.3 5.6 40 745-786 102-141 (157)
385 PRK14985 maltodextrin phosphor 26.5 4.1E+02 0.0088 33.1 10.6 135 333-487 528-666 (798)
386 cd01570 NAPRTase_A Nicotinate 25.7 4.7E+02 0.01 29.0 10.2 89 324-430 208-298 (327)
387 TIGR01449 PGP_bact 2-phosphogl 25.4 60 0.0013 32.8 3.1 38 600-638 86-123 (213)
388 TIGR01664 DNA-3'-Pase DNA 3'-p 25.0 76 0.0017 31.3 3.6 36 747-785 111-156 (166)
389 TIGR01672 AphA HAD superfamily 24.9 1.3E+02 0.0028 31.8 5.4 29 767-806 187-215 (237)
390 COG1819 Glycosyl transferases, 24.7 6.8E+02 0.015 28.6 11.7 101 414-544 287-398 (406)
391 PRK05632 phosphate acetyltrans 24.6 1.4E+03 0.03 28.1 15.3 176 419-636 234-420 (684)
392 COG2217 ZntA Cation transport 24.4 99 0.0021 38.0 5.0 67 571-638 509-575 (713)
393 TIGR02093 P_ylase glycogen/sta 23.6 5.4E+02 0.012 32.1 10.9 105 333-439 526-634 (794)
394 KOG0331 ATP-dependent RNA heli 23.3 3.7E+02 0.008 31.8 9.1 92 337-440 131-225 (519)
395 COG4359 Uncharacterized conser 23.3 53 0.0011 33.1 1.9 37 600-637 74-110 (220)
396 PHA03392 egt ecdysteroid UDP-g 23.1 8.7E+02 0.019 28.7 12.5 103 413-541 348-465 (507)
397 PRK13288 pyrophosphatase PpaX; 22.3 80 0.0017 32.1 3.3 38 600-638 83-120 (214)
398 COG0058 GlgP Glucan phosphoryl 22.1 6.8E+02 0.015 31.0 11.2 130 333-488 486-616 (750)
399 PLN02177 glycerol-3-phosphate 21.5 54 0.0012 38.5 2.0 29 614-643 121-150 (497)
400 TIGR00007 phosphoribosylformim 21.4 2.2E+02 0.0047 29.5 6.4 63 565-635 28-92 (230)
401 TIGR03351 PhnX-like phosphonat 21.0 71 0.0015 32.6 2.6 37 600-637 88-124 (220)
402 PF14639 YqgF: Holliday-juncti 20.5 2.5E+02 0.0055 27.3 6.1 67 351-433 50-117 (150)
403 cd03309 CmuC_like CmuC_like. P 20.5 7.3E+02 0.016 27.4 10.5 27 179-207 152-178 (321)
404 TIGR02253 CTE7 HAD superfamily 20.3 97 0.0021 31.6 3.4 38 600-638 95-132 (221)
405 PRK13222 phosphoglycolate phos 20.1 95 0.0021 31.7 3.3 39 599-638 93-131 (226)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=5.5e-190 Score=1691.39 Aligned_cols=832 Identities=65% Similarity=1.132 Sum_probs=786.0
Q ss_pred CCcccccchhhhhcCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCC-CCCCCCeEEEEEcCCCcceeecCCC-
Q 045882 1 MLSRSCINLVDLASADMMYFPQTPRALPRAMTVQGVIPEADGNESNDENSDSP-SYRHHKKKIIVANFLPLHAQKNLES- 78 (832)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iivsnrlP~~~~~~~~~- 78 (832)
|+||||+|||||++||+..++++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988877777766 5667789999999999999987554
Q ss_pred CCeEEEecCCchhhhhcccccC-CCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEecCHHHHHHHhhhccccccccc
Q 045882 79 GNWCFSFDDDSLLLQMKDGFSS-DTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLSSDLQKKFYHGFCKQYLWPL 157 (832)
Q Consensus 79 ~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwp~ 157 (832)
++|+|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 7899999999999999988864 378999999999888888988888888999999999999999999999999999999
Q ss_pred cccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChh
Q 045882 158 FHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE 237 (832)
Q Consensus 158 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e 237 (832)
|||+++..|+++.+|++++|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888877779999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred hhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCC
Q 045882 238 IYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNH 317 (832)
Q Consensus 238 ~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~ 317 (832)
+||+||+|++||+|||+||+|||||++|+|||++||+|+||+++..++|++++.|+||+++|+++|+|||++.|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHcC--CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 045882 318 PSSSIKVKEIREQFK--GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYT 395 (832)
Q Consensus 318 ~~~~~~~~~l~~~~~--~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~ 395 (832)
|++.+++++++++++ |+++|+||||+|++|||.+||+|||+||++||+|+||++||||++|+|+++++|++++.++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCce
Q 045882 396 ITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSM 475 (832)
Q Consensus 396 lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~ 475 (832)
+|+|||++||+.+|+||+|+.+.++++|+.|||++||||+|||+|||||||++||+|||++.+.++++++.+.+.+++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988878888887777788999
Q ss_pred EEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhhcccc
Q 045882 476 LVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDHYSKR 555 (832)
Q Consensus 476 lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~ 555 (832)
||+|||+||+++|++|++|||||++++|+||++||+||++||+.||++++++|++||+.+|+++||++|+++|++|.+++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred ccccCcccC------------CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc
Q 045882 556 CWGIGFGLS------------LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS 623 (832)
Q Consensus 556 ~~~~~~~~~------------l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 623 (832)
||++|+|++ |+++.++++|+++++|+|++||||||++..+....|+++++++|++|++++|+.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 999988763 78899999999999999999999999986544568999999999999999999999999
Q ss_pred CCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccC
Q 045882 624 GRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDA 703 (832)
Q Consensus 624 GR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~a 703 (832)
||++..+++||+.+++++++|+||++++++++..|+...+..+..|++.+.++++.|++++||+++|.|+++++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988789999999999999888789866554567899999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc
Q 045882 704 APGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 704 d~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a 783 (832)
||+++.++++++.++++..+.+.++.+.+|+.++||+|+++|||.|++.|++.+...|+++|+++|||||.|||+||+++
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999999999999999998888888999999999999999999999999876544488999999999999999999999
Q ss_pred ccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHHHHhhhhcC
Q 045882 784 SQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLAAASK 832 (832)
Q Consensus 784 ~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 832 (832)
+....+.+++..+++|+|+||.++|+|+|+++++++|.++|+.|+++|+
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~ 849 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSE 849 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcch
Confidence 8654556677788889999999999999999999999999999998763
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=5.8e-162 Score=1438.05 Aligned_cols=746 Identities=36% Similarity=0.659 Sum_probs=671.3
Q ss_pred CCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCch-HHHHHHHhhccCeeEEEEe
Q 045882 58 HKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTS-EQEEVAQKLLDEFNCVPTF 136 (832)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 136 (832)
+.|+||||||||+.++++++ |.|+++++.|||+++|.+ + +..+++||||+|..++.+ +++.+... +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 578999999999877653 45555544 5789999999
Q ss_pred cCHHHHHHHhhhccccccccccccCC-CCCC-CCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHH
Q 045882 137 LSSDLQKKFYHGFCKQYLWPLFHYML-PICP-DYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPT 214 (832)
Q Consensus 137 l~~~~~~~~y~gf~~~~lwp~~H~~~-~~~~-~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~ 214 (832)
|+++++++||+||||++|||+|||+. +..+ ....+|++++|++|++||++||++|+++++|+ |+|||||||||+||.
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-D~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-DVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHH
Confidence 99999999999999999999999973 2111 01146888999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcC
Q 045882 215 FLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFG 294 (832)
Q Consensus 215 ~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~g 294 (832)
|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||++||+|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999988643 2589999
Q ss_pred eEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 295 RTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 295 r~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
|.+.|.++|+|||++.|...+..|++.+++++++++++|+++||||||||++|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
|+.|+|+++++|++++.++.++|++||++||+.+|.||+|+.+.++++|+.+||++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCH
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDV 533 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (832)
.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+
T Consensus 484 ~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~ 548 (934)
T PLN03064 484 DS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTA 548 (934)
T ss_pred cC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCH
Confidence 74 57999999999999999 589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCCC-----------CCCCCH
Q 045882 534 AYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHAL-----------IKKPSR 602 (832)
Q Consensus 534 ~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~-----------~~~~s~ 602 (832)
.+|+++|+++|.++...+..+ +..+ -..|+.+.+.++|+++++|+|||||||||++..+. ...|++
T Consensus 549 ~~Wa~~fl~~L~~~~~~~~~~-~~~~--~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p 625 (934)
T PLN03064 549 QEWAETFVSELNDTVVEAQLR-TRQV--PPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHP 625 (934)
T ss_pred HHHHHHHHHHHHHHHhhhhcc-cccc--CCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCH
Confidence 999999999999986554322 2211 12489999999999999999999999999985432 234789
Q ss_pred HHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEE-cCcccchhHHHHHHHHHHHHH
Q 045882 603 DVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWET-STVAADFEWKRITEPVMKLYT 681 (832)
Q Consensus 603 ~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~-~~~~~~~~w~~~v~~i~~~~~ 681 (832)
+++++|++||+++++.|+|+|||++..+++||+.+ +++++|+||++++.+ +..|.. .....+.+|++.+.++|++|+
T Consensus 626 ~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~-~~~w~~~~~~~~~~~W~~~v~~ile~~~ 703 (934)
T PLN03064 626 ELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHT-KGEWMTTMPEHLNMDWVDSVKHVFEYFT 703 (934)
T ss_pred HHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecC-CCcceeccccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987 799999999999976 457874 333346789999999999999
Q ss_pred hcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHH-HHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhC
Q 045882 682 EATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHL-ESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISD 760 (832)
Q Consensus 682 e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l-~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~ 760 (832)
+++||+++|.|+++++|||+++||+++..||+++.+++ ...+.+.++.|..|+.+|||+|.++|||.|++.|++.+...
T Consensus 704 eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~ 783 (934)
T PLN03064 704 ERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHS 783 (934)
T ss_pred hcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999 44566778999999999999999999999999999976432
Q ss_pred C---CCcceEEEEeCChh-hHHHHHHcccccCC------------------------------------------C----
Q 045882 761 G---KLPDFVLCVGDDRS-DEDMFESISQATYG------------------------------------------S---- 790 (832)
Q Consensus 761 g---i~~d~vl~~GDd~N-D~~Mf~~a~~~~~~------------------------------------------~---- 790 (832)
+ ..+|||+|+|||.+ ||+||+++...... +
T Consensus 784 ~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (934)
T PLN03064 784 KSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSS 863 (934)
T ss_pred cccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCccccc
Confidence 2 35899999999875 99999997542110 0
Q ss_pred ---------C----------------CC-CCCcEEEEEeCCcccccceEeCChhHHHHHHHHhhhhcC
Q 045882 791 ---------S----------------LP-IAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLAAASK 832 (832)
Q Consensus 791 ---------~----------------~~-~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~~~~~ 832 (832)
+ +. ...+.|+|+||.|+|.|+|++++.+||+.+|+.|+++++
T Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (934)
T PLN03064 864 AKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASS 931 (934)
T ss_pred ccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhcccc
Confidence 0 00 122359999999999999999999999999999998764
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=8.2e-154 Score=1381.29 Aligned_cols=746 Identities=36% Similarity=0.656 Sum_probs=667.0
Q ss_pred CCCCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCch-HHHHHHHhhccCeeEEE
Q 045882 56 RHHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTS-EQEEVAQKLLDEFNCVP 134 (832)
Q Consensus 56 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 134 (832)
....|+||||||||+.++++++ |+|+|+++.|||+++|.+ + ...+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~-~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE-DSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecCC-CceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 4577999999999999887643 789999999999999975 5 457999999999876654 4444444 467899999
Q ss_pred EecCHHHHHHHhhhccccccccccccC-CCCCCC-CccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccH
Q 045882 135 TFLSSDLQKKFYHGFCKQYLWPLFHYM-LPICPD-YGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVL 212 (832)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~ll 212 (832)
||| ++++++||+||||++|||+|||+ .+..+. ...+|.++.|++|++||++||++|++.++|+ |+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-DVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhhH
Confidence 999 99999999999999999999998 232221 1145667899999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEE
Q 045882 213 PTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEY 292 (832)
Q Consensus 213 p~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~ 292 (832)
|+|||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+|++++++... ++.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999886432 4789
Q ss_pred cCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEE
Q 045882 293 FGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVL 372 (832)
Q Consensus 293 ~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 372 (832)
+|+.++|.++|+|||++.|.+....+++....++++++++++++|++|||+|+.|||.++|+||++||++||+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999887777777888889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeee
Q 045882 373 VQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTI 452 (832)
Q Consensus 373 vqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a 452 (832)
|||+.|+|+++++|+++++++++++.+||.+||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 453 CRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
||.+ +.|++|+|||+|+++.+ .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+|
T Consensus 398 ~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 398 CQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462 (797)
T ss_pred eecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhC
Confidence 9875 47999999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCC-----CCCCCCHHHHH
Q 045882 532 DVAYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA-----LIKKPSRDVIY 606 (832)
Q Consensus 532 ~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~-----~~~~~s~~~~~ 606 (832)
|+.+|+++|+++|.++++.+..+....+ ..|+.+.+.++|+++++++|||||||||++..+ ....|++++++
T Consensus 463 ~~~~Wa~~fl~~l~~~~~~~~~~~~~~~---~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~ 539 (797)
T PLN03063 463 SAQKWADDFMSELNDIIVEAELRTRNIP---LELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKE 539 (797)
T ss_pred CHHHHHHHHHHHHHHHhhhhhhcccCCC---CCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHH
Confidence 9999999999999999876543221111 248999999999999999999999999998543 23458899999
Q ss_pred HHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcC-cccchhHHHHHHHHHHHHHhcCC
Q 045882 607 VLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETST-VAADFEWKRITEPVMKLYTEATD 685 (832)
Q Consensus 607 ~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~-~~~~~~w~~~v~~i~~~~~e~~~ 685 (832)
+|++|++++++.|+|+|||+...+++||+.+ +++++|+||++++.. +..|.... ...+.+|++.+.++|++|++++|
T Consensus 540 ~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtp 617 (797)
T PLN03063 540 TLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTP 617 (797)
T ss_pred HHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999976 699999999999875 45787543 23367899999999999999999
Q ss_pred ceEEeecceeEEEEeccCCCCCCchhHHHHHHHHH-HHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhC---C
Q 045882 686 GSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLE-SVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISD---G 761 (832)
Q Consensus 686 gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~-~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~---g 761 (832)
|+++|.|+++++||||++||+++..+++++.+++. ..+.+.++.+..|++++||+|+++|||.|++.|++.+... +
T Consensus 618 Gs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~ 697 (797)
T PLN03063 618 RSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMT 697 (797)
T ss_pred CcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccC
Confidence 99999999999999999999999899999999984 4556678999999999999999999999999999976321 2
Q ss_pred CCcceEEEEeCCh-hhHHHHHHcccccCC--------C-----------CCCCCCcEEEEEeCCcccccceEeCChhHHH
Q 045882 762 KLPDFVLCVGDDR-SDEDMFESISQATYG--------S-----------SLPIAPEIFACTVGQKPSKARYYLDDEEDVL 821 (832)
Q Consensus 762 i~~d~vl~~GDd~-ND~~Mf~~a~~~~~~--------~-----------~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~ 821 (832)
..+|||+|+||+. .||+||+++...... . .....+++|+|+||.++|+|+|||++++||.
T Consensus 698 ~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~ 777 (797)
T PLN03063 698 TPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDVV 777 (797)
T ss_pred CCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCeecCCCHHHHH
Confidence 3689999999984 699999998742210 0 0123567899999999999999999999999
Q ss_pred HHHHHhhhhc
Q 045882 822 ALLKGLAAAS 831 (832)
Q Consensus 822 ~~L~~l~~~~ 831 (832)
++|+.|+++.
T Consensus 778 ~lL~~l~~~~ 787 (797)
T PLN03063 778 SLLHKLAVAN 787 (797)
T ss_pred HHHHHHhccC
Confidence 9999999754
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=7.1e-144 Score=1299.36 Aligned_cols=720 Identities=36% Similarity=0.671 Sum_probs=658.4
Q ss_pred CeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCc---hHHHHHHHhhccCeeEEEE
Q 045882 59 KKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT---SEQEEVAQKLLDEFNCVPT 135 (832)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 135 (832)
+|+||||||||+.+++++ |+|++++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988754 589999999999999977554 5899999999976554 2233343 34678999999
Q ss_pred ecCHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHH
Q 045882 136 FLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTF 215 (832)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~ 215 (832)
||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 47999999999999999999999999985 9999999999999999
Q ss_pred HHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCe
Q 045882 216 LRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGR 295 (832)
Q Consensus 216 lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr 295 (832)
||++.|+++||||||+|||++|+||+||+|++||+|||+||+|||||++|++||++||.+++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 296 TIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
.++|+++|+|||++.|.+....+++....+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778887888889998999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 376 VNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 376 ~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
+.|+|...++|+++++++.+++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHH
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAY 535 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (832)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+++|++.|++++++++.+||+.+
T Consensus 387 ~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~ 451 (726)
T PRK14501 387 D---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHK 451 (726)
T ss_pred C---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 5 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhc
Q 045882 536 WAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCG 613 (832)
Q Consensus 536 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~ 613 (832)
|+++|++++.++++.+.......+. .++.+.+.++|+++++|+|++||||||++... ....|+++++++|++|++
T Consensus 452 w~~~~l~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~ 528 (726)
T PRK14501 452 WASDFLDELREAAEKNKAFASKPIT---PAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAA 528 (726)
T ss_pred HHHHHHHHHHHHHhhhhccccccCC---ccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHc
Confidence 9999999999998766433322222 28999999999999999999999999998432 235689999999999987
Q ss_pred cCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecc
Q 045882 614 DSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKE 693 (832)
Q Consensus 614 d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~ 693 (832)
++|+.|+|+|||++..++++|+.++ +++|++||++++.++ ..|..... .+..|++.+.++++.+.++++|+++|.|+
T Consensus 529 d~g~~V~ivSGR~~~~l~~~~~~~~-l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~~~~gs~ie~k~ 605 (726)
T PRK14501 529 DPNTDVAIISGRDRDTLERWFGDLP-IHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVDRTPGSFIEEKE 605 (726)
T ss_pred CCCCeEEEEeCCCHHHHHHHhCCCC-eEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHhcCCCcEEEEcc
Confidence 7899999999999999999998874 799999999998654 56765433 46789999999999999999999999999
Q ss_pred eeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC
Q 045882 694 TALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD 773 (832)
Q Consensus 694 ~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd 773 (832)
.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++ ++++++++|||||
T Consensus 606 ~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~~~d~vl~~GD~ 680 (726)
T PRK14501 606 ASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AGPYDFVLAIGDD 680 (726)
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cCCCCEEEEECCC
Confidence 99999999999999888889999999988888888889999999999999999999999988 5688999999999
Q ss_pred hhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHHHHhhh
Q 045882 774 RSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 774 ~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
.||++||+.++.. .++|+||++++.|+|++++++||+++|+.|++
T Consensus 681 ~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 681 TTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 9999999998531 28999999999999999999999999999985
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-133 Score=1164.54 Aligned_cols=728 Identities=53% Similarity=0.924 Sum_probs=684.1
Q ss_pred CCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEec
Q 045882 58 HKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFL 137 (832)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 137 (832)
..|+|+||||||+.++++.+++.|.|+++.+||+.+++.++. +++..||||++.++++++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 469999999999999776777899999999999999987666 6899999999988999999999999999999999999
Q ss_pred CHHHHHHHhhhccccccccccccC-CCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHH
Q 045882 138 SSDLQKKFYHGFCKQYLWPLFHYM-LPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFL 216 (832)
Q Consensus 138 ~~~~~~~~y~gf~~~~lwp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~l 216 (832)
+++....+|+||||++|||+|||+ .|..+... .|+.+.|.+|+.+|+.|||+|++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 66666554 77899999999999999999999999 4699999999999999999
Q ss_pred HhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeE
Q 045882 217 RRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT 296 (832)
Q Consensus 217 r~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 296 (832)
|++.++++||||+|+|||++|+|||+|.|++||.+|+++|+|||||++|+|||++||.|++++++.++.++.++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888899999999
Q ss_pred EEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEe
Q 045882 297 IYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIV 376 (832)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (832)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 377 NPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 377 ~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
+|+++++++|++++.++..++.+||++||+..++||+++...++..++.++|.+||||++++++|||||+++||++|++.
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999884
Q ss_pred CCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHH
Q 045882 457 TPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAY 535 (832)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (832)
+++++|+|||+|+++++ +++++|||||.+++|.+|..|++|+++|++.|+.++++++..|++.+
T Consensus 399 ---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~ 463 (732)
T KOG1050|consen 399 ---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVY 463 (732)
T ss_pred ---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHH
Confidence 57999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcccCCCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccC
Q 045882 536 WAHSFMQDLERACRDHYSKRCWGIGFGLSLSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDS 615 (832)
Q Consensus 536 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~ 615 (832)
|+.+|++.+.+.++... ....-+.. |..+.+++.|+++++|+|++|||||+++..++. ++..|+.||.|+
T Consensus 464 W~~~~~~~l~~~~~~~~-~~~~~~~~---l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~~~l~~L~~dp 533 (732)
T KOG1050|consen 464 WAKSFLQGLKRIWKVGF-LGFRVTPL---LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AISILKDLCSDP 533 (732)
T ss_pred HHHHHHHhhhhhhhhcc-cccccccc---cChhHhhhhhhhccceEEEecccccccCCCCch------HHHHHHHHhcCC
Confidence 99999997777665543 11111111 788999999999999999999999999854322 899999999999
Q ss_pred CCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeeccee
Q 045882 616 NNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETA 695 (832)
Q Consensus 616 g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~ 695 (832)
+|.|+|+|||++..+.+|+..++++|++||||++++++++ |+... .+++|++.+++++++|++||||+++|.|+++
T Consensus 534 ~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~ 609 (732)
T KOG1050|consen 534 KNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTPGSYIERKETA 609 (732)
T ss_pred CCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCCCceecccCce
Confidence 9999999999999999999999999999999999999877 99887 7899999999999999999999999999999
Q ss_pred EEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChh
Q 045882 696 LVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRS 775 (832)
Q Consensus 696 l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~N 775 (832)
++|||+++||++|.+||+|+.++|+. .+.++.++.|+..|||.|.|+|||.++..++..+ ..++|+++|+||+.+
T Consensus 610 l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~df~~c~g~d~t 684 (732)
T KOG1050|consen 610 LVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPDFVLCIGDDRT 684 (732)
T ss_pred EEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcceEEEecCCCC
Confidence 99999999999999999999999998 7899999999999999999999999999999998 567899999999999
Q ss_pred hHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCChhHHHHHHH
Q 045882 776 DEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDDEEDVLALLK 825 (832)
Q Consensus 776 D~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~~~eV~~~L~ 825 (832)
|++||+++......... .+.|+|++|.++|+|+|+++++.||.++|+
T Consensus 685 Ded~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 685 DEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred hHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 99999999875433222 678999999999999999999999999986
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=1.3e-120 Score=1017.09 Aligned_cols=456 Identities=28% Similarity=0.519 Sum_probs=421.0
Q ss_pred CCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEec
Q 045882 58 HKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFL 137 (832)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 137 (832)
++|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+++|.||+|
T Consensus 1 m~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 1 MSRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecC
Confidence 3689999999996321 1 3457899999988765 5799999999964322 2224333346799999999
Q ss_pred CHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHH
Q 045882 138 SSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLR 217 (832)
Q Consensus 138 ~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr 217 (832)
+++++++||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999765 47999999999999999999999999985 999999999999999999
Q ss_pred hhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEE
Q 045882 218 RRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTI 297 (832)
Q Consensus 218 ~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~ 297 (832)
++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999876332 2567889999
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEec
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVN 377 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 377 (832)
.|+++|+|||++.|...+..+ ...+.++++++++|+++|+||||+||+|||.++|+||++||++||+|+||++|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999999887755 5677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCC
Q 045882 378 PARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGT 457 (832)
Q Consensus 378 p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~ 457 (832)
|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||.+
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHH
Q 045882 458 PKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWA 537 (832)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~ 537 (832)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+
T Consensus 378 -------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~ 444 (474)
T PRK10117 378 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQ 444 (474)
T ss_pred -------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHH
Confidence 2579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 045882 538 HSFMQDLERACR 549 (832)
Q Consensus 538 ~~~l~~l~~~~~ 549 (832)
++||.+|.++..
T Consensus 445 ~~fL~~L~~~~~ 456 (474)
T PRK10117 445 ECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHhhh
Confidence 999999998753
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=9e-119 Score=1013.92 Aligned_cols=462 Identities=27% Similarity=0.454 Sum_probs=428.0
Q ss_pred EEcCCCcceeecCCC-CCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCc-hHH-HHHHHhhccCeeEEEEecCHH
Q 045882 64 VANFLPLHAQKNLES-GNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT-SEQ-EEVAQKLLDEFNCVPTFLSSD 140 (832)
Q Consensus 64 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 140 (832)
||||||+.+.+++++ .+|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987643 35888999999999998877656789999999975221 111 112222245799999999999
Q ss_pred HHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhc
Q 045882 141 LQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRF 220 (832)
Q Consensus 141 ~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~ 220 (832)
+++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAEG-ATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 57999999999999999999999999985 999999999999999999999
Q ss_pred CCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccC---------------
Q 045882 221 HRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKR--------------- 285 (832)
Q Consensus 221 ~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~--------------- 285 (832)
|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --ceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhC
Q 045882 286 --GYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVH 363 (832)
Q Consensus 286 --~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~ 363 (832)
..+++.++||.++|+++|+|||++.|.+....+++.++++++|++++|+++|++|||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCC
Q 045882 364 PELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGM 443 (832)
Q Consensus 364 P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGm 443 (832)
|+|+||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 045882 444 NLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEK 523 (832)
Q Consensus 444 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~ 523 (832)
|||++||||||++ ++|+||+|||+|++++|.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999884 4799999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCHHHHHHHHHHHHHH
Q 045882 524 HYRYICSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 524 ~~~~v~~~~~~~W~~~~l~~l~~ 546 (832)
++++|.+||+.+|+++||.+|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999864
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=1.4e-119 Score=1023.55 Aligned_cols=467 Identities=46% Similarity=0.854 Sum_probs=358.7
Q ss_pred eEEEEEcCCCcceeecCCCCC--eEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchH--HHHHHHhhccCeeEEEE
Q 045882 60 KKIIVANFLPLHAQKNLESGN--WCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSE--QEEVAQKLLDEFNCVPT 135 (832)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 135 (832)
|+||||||||+.+++++++|. |+++.+.|||+.+|.+ +.+..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~-l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDP-LLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHH-HHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHH-HHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999875565 8888888999999866 444589999999998766544 45566677899999999
Q ss_pred ecCHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHH
Q 045882 136 FLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTF 215 (832)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~ 215 (832)
||+++++++||+||||++|||+|||.++..+. ...|+++.|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999998762222 26899999999999999999999999997 59999999999999999
Q ss_pred HHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCe
Q 045882 216 LRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGR 295 (832)
Q Consensus 216 lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr 295 (832)
||++.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 7999999
Q ss_pred EEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC-CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 296 TIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG-KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
.++|.++|+|||++.|...+.++++.++.+++++++++ +++|+||||+|++|||.+||+||++||++||+|+|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|||++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccCC-CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCH
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDV 533 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (832)
++ ++|+||+|||+|++++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 85 479999999999999997 67999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 045882 534 AYWAHSFMQDLER 546 (832)
Q Consensus 534 ~~W~~~~l~~l~~ 546 (832)
.+|+++||++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-113 Score=954.12 Aligned_cols=467 Identities=40% Similarity=0.681 Sum_probs=433.1
Q ss_pred CCCCCCeEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEE
Q 045882 54 SYRHHKKKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCV 133 (832)
Q Consensus 54 ~~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (832)
+.....|+||||||+|+...+..+++...+..+.|||+++|++. ....+++|+||+|...++.+..........+++..
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~-~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~ 88 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPL-LRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSA 88 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchh-hHhhcceEEecCceeccccccchhhhhccccceEE
Confidence 34677899999999999987666667788899999999999764 44689999999997654223222233335689999
Q ss_pred EEecCHHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHH
Q 045882 134 PTFLSSDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLP 213 (832)
Q Consensus 134 pv~l~~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp 213 (832)
||+++.+++++||+||||++|||+|||+.+. ..|++++|.+|++||++|||+|++.++++ |+||||||||+|+|
T Consensus 89 ~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~P 162 (486)
T COG0380 89 PVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVP 162 (486)
T ss_pred EEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhhH
Confidence 9999999999999999999999999999865 57999999999999999999999999985 99999999999999
Q ss_pred HHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEE--
Q 045882 214 TFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE-- 291 (832)
Q Consensus 214 ~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~-- 291 (832)
.|||++.|+++||||||+|||++|+|||||+|++|++|||+||+|||||++|++||+++|+|+++.... ..+.
T Consensus 163 ~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~ 237 (486)
T COG0380 163 QMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFN 237 (486)
T ss_pred HHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred -EcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC-CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCc
Q 045882 292 -YFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG-KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGK 369 (832)
Q Consensus 292 -~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~ 369 (832)
++|+.+.+..+|+|||+..|.....++.+..+..++++.+.+ +++|+||||+|+.||+..+++||++||++||+|+||
T Consensus 238 ~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~k 317 (486)
T COG0380 238 GADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGK 317 (486)
T ss_pred ccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCc
Confidence 458999999999999999999999999998999999999976 999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCccee
Q 045882 370 LVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYK 449 (832)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~E 449 (832)
|+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+.++++++++.+||++|||+++||+|||||||++|
T Consensus 318 vvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakE 397 (486)
T COG0380 318 VVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKE 397 (486)
T ss_pred eEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh
Q 045882 450 YTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYIC 529 (832)
Q Consensus 450 a~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~ 529 (832)
|+|||.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.
T Consensus 398 yVa~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~ 462 (486)
T COG0380 398 YVAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVL 462 (486)
T ss_pred HHHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 9999884 5799999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 045882 530 SHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 530 ~~~~~~W~~~~l~~l~~~ 547 (832)
+||+++|+++|+.+|.+.
T Consensus 463 ~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 463 THDVARWANSFLDDLAQA 480 (486)
T ss_pred hhhHHHHHHHHHHHHHhc
Confidence 999999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=2.9e-107 Score=926.86 Aligned_cols=454 Identities=39% Similarity=0.696 Sum_probs=424.3
Q ss_pred eEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCc-hHHHHHHHhhccCeeEEEEecC
Q 045882 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDT-SEQEEVAQKLLDEFNCVPTFLS 138 (832)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l~ 138 (832)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56778999999988665 5799999999976553 3344555566788999999999
Q ss_pred HHHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHh
Q 045882 139 SDLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRR 218 (832)
Q Consensus 139 ~~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~ 218 (832)
+++++.||+||||++|||+|||+++. .+|++++|++|++||++||++|++.++|+ |+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~-d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQPG-DIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999654 57999999999999999999999999984 9999999999999999999
Q ss_pred hcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEE
Q 045882 219 RFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIY 298 (832)
Q Consensus 219 ~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~ 298 (832)
+.|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||++++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999886542 4678899999
Q ss_pred EEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecC
Q 045882 299 VKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNP 378 (832)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (832)
|.++|+|||++.|.+....+++.+..++++++++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888778888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCC
Q 045882 379 ARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTP 458 (832)
Q Consensus 379 ~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 458 (832)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++++++.++|++|||||+||++||||||++|||||+.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 459 KMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
+.|+||+|+++|+++.+.+|++|||||++++|+||.++|+|+++||+.|+++++++|.+||+.+|++
T Consensus 382 -------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 382 -------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred -------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 045882 539 SFMQDLE 545 (832)
Q Consensus 539 ~~l~~l~ 545 (832)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999884
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=1e-97 Score=854.72 Aligned_cols=459 Identities=44% Similarity=0.779 Sum_probs=428.5
Q ss_pred eEEEEEcCCCcceeecCCCCCeEEEecCCchhhhhcccccCCCCeeEEeeCCCCCCchHHHHHHHhhccCeeEEEEecCH
Q 045882 60 KKIIVANFLPLHAQKNLESGNWCFSFDDDSLLLQMKDGFSSDTDVFYVGSLKVDVDTSEQEEVAQKLLDEFNCVPTFLSS 139 (832)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 139 (832)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+ +..+++||||++.+.+.++.+.+.+.+.++|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~-~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLL-KRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHH-hcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 68999999999999997644 4579999999998776544444555668899999999999
Q ss_pred HHHHHHhhhccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhh
Q 045882 140 DLQKKFYHGFCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRR 219 (832)
Q Consensus 140 ~~~~~~y~gf~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~ 219 (832)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|.+.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5799999999999999999999999997 499999999999999999999
Q ss_pred cCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEE
Q 045882 220 FHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYV 299 (832)
Q Consensus 220 ~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i 299 (832)
.|+++||||+|||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886552 368899999999
Q ss_pred EEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCC
Q 045882 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPA 379 (832)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (832)
.++|+|||++.|.+....++..++.++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998776666666667777778899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCC
Q 045882 380 RSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPK 459 (832)
Q Consensus 380 r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~ 459 (832)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||.+||||||++|||||+.+
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999885
Q ss_pred chhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHH
Q 045882 460 MDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHS 539 (832)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~ 539 (832)
++|+||+|+++|+++.+.+|++|||+|++++|+||.++|+|+++|++.+++++++++.++++..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 47999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 045882 540 FMQDL 544 (832)
Q Consensus 540 ~l~~l 544 (832)
|+++|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99987
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.7e-35 Score=354.66 Aligned_cols=527 Identities=14% Similarity=0.125 Sum_probs=330.1
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhh-----------------cCCchHHH-HHHHHhCCEEeec
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR-----------------TLPVRNEI-LKALLNADLIGFH 261 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r-----------------~lp~r~~i-l~~ll~~dligf~ 261 (832)
|+|+-|+++--.+...|++++ ++|..++.|+- ..+-++ .++.|-+. -..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999999888888888876 68999999963 111111 01222221 2347789999988
Q ss_pred ChhhHHHHHHHH-------HHHhCCcccccCceeeEEEcCe-EEEEEEeecCCCchHHHhhcCCCCh-------------
Q 045882 262 TFDYARHFLSCC-------SRMLGLDYESKRGYIGLEYFGR-TIYVKILHVGIHMGRLESALNHPSS------------- 320 (832)
Q Consensus 262 t~~~~~~Fl~~~-------~r~l~~~~~~~~~~~~~~~~gr-~~~i~i~P~GId~~~~~~~~~~~~~------------- 320 (832)
|......-...- .|.|.. ...+ ++..+|+ .-++.|+|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 877665432110 011100 0111 2333333 2278899999999999864211110
Q ss_pred HHHHHHHHHHc--CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHH----HHHHHHHH
Q 045882 321 SIKVKEIREQF--KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDV----QDAKLETY 394 (832)
Q Consensus 321 ~~~~~~l~~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~----~~l~~ev~ 394 (832)
.....+++..+ +++++||+|+|+++.||+..+|+||..+.+..+.. ++++ ++|... ...+. .++..++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112344333 57889999999999999999999999987543321 2333 345321 11111 12334555
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----CcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCC
Q 045882 395 TITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA----ECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVC 470 (832)
Q Consensus 395 ~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~ 470 (832)
+++++.+. ...+.+.++++++++.++|+.| ||||+||.+|||||+++|||||+
T Consensus 539 ~li~~lgL-------~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG---------------- 595 (1050)
T TIGR02468 539 KLIDKYDL-------YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG---------------- 595 (1050)
T ss_pred HHHHHhCC-------CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----------------
Confidence 55555432 2234456789999999999988 69999999999999999999994
Q ss_pred CCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 471 PRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 471 ~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+. ++.++...++.++.+..+++...++.+++.+...
T Consensus 596 ---lPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 596 ---LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred ---CCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 4799999999988883 59999999999999999999974 4555556666778888899999999999888876
Q ss_pred HHhhcccccc-------------c--------cCcccC-----------------CCH----HHHHHHhh----------
Q 045882 548 CRDHYSKRCW-------------G--------IGFGLS-----------------LSV----DRIVDAYK---------- 575 (832)
Q Consensus 548 ~~~~~~~~~~-------------~--------~~~~~~-----------------l~~----~~i~~~y~---------- 575 (832)
...+..-... + +++.++ ++. ..+.++.+
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSS 751 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccc
Confidence 5444111100 0 000010 000 01111111
Q ss_pred ---------------ccCcEEEE--EecCCCcCCCCCCCCCCCHHHHH-HHHHhh---ccCCCeEEEEcCCChhhHHHHh
Q 045882 576 ---------------RTSRRAIF--LDYDGTVVPHHALIKKPSRDVIY-VLRELC---GDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 576 ---------------~s~~rlI~--lD~DGTLl~~~~~~~~~s~~~~~-~L~~L~---~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
...+++|+ +|+|+| .. ..+.++ +++.+. ....+.++++|||+...+...+
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~--------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l 822 (1050)
T TIGR02468 752 AKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD--------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFL 822 (1050)
T ss_pred cccccccccccCccccccceEEEEEeccCCC-CC--------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHH
Confidence 11256777 999999 32 123232 233332 2345889999999999999988
Q ss_pred cC--CC---CceEEEeCCEEEEeCC-----CccEEEcC---cccchhH-HHHHHHHHHHHHhc--------CCceEEeec
Q 045882 635 AP--CE---NLGIAAEHGYYLRWTK-----KSEWETST---VAADFEW-KRITEPVMKLYTEA--------TDGSYIEKK 692 (832)
Q Consensus 635 ~~--l~---~l~liaenGa~i~~~~-----~~~w~~~~---~~~~~~w-~~~v~~i~~~~~e~--------~~gs~ie~k 692 (832)
.. +| ...+||.-|+.|+++. +..|.... ...+..| .+.+...+..+... .++...+..
T Consensus 823 ~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~ 902 (1050)
T TIGR02468 823 KSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDE 902 (1050)
T ss_pred HhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecCh
Confidence 65 43 4569999999998862 12222110 0112346 23355454444321 133333333
Q ss_pred c----eeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE-EE-cCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcce
Q 045882 693 E----TALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV-KR-GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDF 766 (832)
Q Consensus 693 ~----~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v-~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~ 766 (832)
. +++.+... |++.. ...+++.+.|... ...+.+ ++ +..+++|.|..+|||.|+++|+.++ |++.++
T Consensus 903 ~~q~~~k~SY~v~--d~~~~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~ 974 (1050)
T TIGR02468 903 ESSTDHCYAFKVK--DPSKV-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELAN 974 (1050)
T ss_pred hhCCCceEEEEec--CcccC-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHH
Confidence 2 33443322 22221 1245555555431 233433 34 4589999999999999999999999 999999
Q ss_pred EEE-EeCChh-h-HHHHHHc
Q 045882 767 VLC-VGDDRS-D-EDMFESI 783 (832)
Q Consensus 767 vl~-~GDd~N-D-~~Mf~~a 783 (832)
+++ +||+.| | ++|+.-.
T Consensus 975 v~VfaGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 975 MAVFVGESGDTDYEGLLGGL 994 (1050)
T ss_pred eEEEeccCCCCCHHHHhCCc
Confidence 955 999999 9 5565443
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-35 Score=308.75 Aligned_cols=247 Identities=29% Similarity=0.483 Sum_probs=214.0
Q ss_pred CHHHHHHHhhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEE
Q 045882 566 SVDRIVDAYKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIA 643 (832)
Q Consensus 566 ~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~li 643 (832)
..+.+.+.|.++++++||+||||||++... ....|+++++++|++|++++++.|+|+|||+...+..|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 445677889999999999999999998432 4567899999999999999999999999999999999998 8899999
Q ss_pred EeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHh
Q 045882 644 AEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVL 723 (832)
Q Consensus 644 aenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l 723 (832)
|+||++++...++.|+...+..+..|++.+..+++++++++||+++|.|++++.|||++++++....++...... .
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~----~ 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT----L 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh----c
Confidence 999999999888889988888888999999999999999999999999999999999999776544333222222 1
Q ss_pred cCCC-EEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE
Q 045882 724 ANEP-VVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT 802 (832)
Q Consensus 724 ~~~~-~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~ 802 (832)
.+.. +.+..|+.+||++|.++|||.+++++++.. +...++++|.|||.+||+||+++.... .+++.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 2233 889999999999999999999999999987 444478999999999999999998642 26899
Q ss_pred eCCcccccceEeCChhHHHHHHHHhhhh
Q 045882 803 VGQKPSKARYYLDDEEDVLALLKGLAAA 830 (832)
Q Consensus 803 vG~~~s~A~y~l~~~~eV~~~L~~l~~~ 830 (832)
+|.+.+.|++.+.....+...|.++...
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~ 254 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEA 254 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999888888887653
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.6e-35 Score=311.18 Aligned_cols=226 Identities=41% Similarity=0.684 Sum_probs=155.7
Q ss_pred EEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEE
Q 045882 583 FLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWET 660 (832)
Q Consensus 583 ~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~ 660 (832)
||||||||.+..+ ....|++++.++|++||+++++.|+|+|||+... .+.+..+++++++|+||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~-~~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDD-LERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHH-HHHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH-hHHhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999554 3457889999999999999999999999999999 555556789999999999999998888887
Q ss_pred cCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC-CEEEEEcCeEEEE
Q 045882 661 STVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE-PVVVKRGYNIVEV 739 (832)
Q Consensus 661 ~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~-~~~v~~g~~~vEV 739 (832)
.....+..|++.+.++++++.+++||+++|.|+++++|||++++++++..+++++.+++.+.+... ++.+..|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 666677889999999999999999999999999999999999999999889999999999877765 8999999999999
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-----CcccccceEe
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-----QKPSKARYYL 814 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-----~~~s~A~y~l 814 (832)
+|.+++||.|++.|++.+...+..+++++|+|||.+||+||+++.... ...+++.|| .++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999988332334899999999999999999998641 011455555 4689999999
Q ss_pred CCh
Q 045882 815 DDE 817 (832)
Q Consensus 815 ~~~ 817 (832)
+|+
T Consensus 232 ~~p 234 (235)
T PF02358_consen 232 DDP 234 (235)
T ss_dssp ---
T ss_pred ccC
Confidence 886
No 15
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=9.1e-34 Score=307.46 Aligned_cols=246 Identities=26% Similarity=0.337 Sum_probs=197.0
Q ss_pred HHHHHHhhccCcEEEEEecCCCcCCCCC-CCC-CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEe
Q 045882 568 DRIVDAYKRTSRRAIFLDYDGTVVPHHA-LIK-KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAE 645 (832)
Q Consensus 568 ~~i~~~y~~s~~rlI~lD~DGTLl~~~~-~~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liae 645 (832)
+.++ ++.+.++.+||+||||||++..+ .++ .+++++.++|++|+ +++.|+|+|||++..+.++++ +..++++++
T Consensus 101 ~~~~-~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~ 176 (366)
T PLN03017 101 EQIM-EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGS 176 (366)
T ss_pred HHHH-HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEc
Confidence 3443 44566889999999999996543 233 79999999999995 579999999999999999964 457899999
Q ss_pred CCEEEEeCCCccEEE------cCcccchhHHHHHHHH---HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHH
Q 045882 646 HGYYLRWTKKSEWET------STVAADFEWKRITEPV---MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELL 716 (832)
Q Consensus 646 nGa~i~~~~~~~w~~------~~~~~~~~w~~~v~~i---~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~ 716 (832)
||++++.+.+..+.. ........|...+.++ ++.+++++||+++|+|+++++||||++++. .+.++.
T Consensus 177 hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~ 252 (366)
T PLN03017 177 HGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELV 252 (366)
T ss_pred CCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHH
Confidence 999998765422110 0111234576767766 556677899999999999999999999764 356788
Q ss_pred HHHHHHhcCCC-EEEEEcCeEEEEEeC-CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCC
Q 045882 717 DHLESVLANEP-VVVKRGYNIVEVKPQ-GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPI 794 (832)
Q Consensus 717 ~~l~~~l~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~ 794 (832)
.++...+.+++ +.+..|+.++||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+....
T Consensus 253 ~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~------- 325 (366)
T PLN03017 253 LQVRSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG------- 325 (366)
T ss_pred HHHHHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC-------
Confidence 88888888776 789999999999995 999999999999988222223568999999999999999996421
Q ss_pred CCcEEEEEeC--CcccccceEeCChhHHHHHHHHhhhh
Q 045882 795 APEIFACTVG--QKPSKARYYLDDEEDVLALLKGLAAA 830 (832)
Q Consensus 795 ~~~~f~v~vG--~~~s~A~y~l~~~~eV~~~L~~l~~~ 830 (832)
..|+|.|| .++|.|+|+|+++++|..+|+.|+.-
T Consensus 326 --~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~ 361 (366)
T PLN03017 326 --EGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEW 361 (366)
T ss_pred --CceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHH
Confidence 12899999 57999999999999999999999863
No 16
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=1.6e-33 Score=304.71 Aligned_cols=240 Identities=24% Similarity=0.368 Sum_probs=195.5
Q ss_pred hhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEE
Q 045882 574 YKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLR 651 (832)
Q Consensus 574 y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~ 651 (832)
..++++++||+||||||+|... ....++++++++|++|++ +..|+|+|||++..+.++++ ++.++++++||++++
T Consensus 93 ~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~ 169 (354)
T PLN02151 93 KSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIK 169 (354)
T ss_pred hhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceee
Confidence 3567889999999999997543 344789999999999973 57999999999999999997 567999999999998
Q ss_pred eCC-CccEEE----cCcccchhHHHHHHHHHHHHH---hcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHh
Q 045882 652 WTK-KSEWET----STVAADFEWKRITEPVMKLYT---EATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVL 723 (832)
Q Consensus 652 ~~~-~~~w~~----~~~~~~~~w~~~v~~i~~~~~---e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l 723 (832)
.++ +..|+. .......+|.+.+.++++.+. +++||+++|+|.++++||||+++++ ++.++.+++.+++
T Consensus 170 ~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~ 245 (354)
T PLN02151 170 GPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVL 245 (354)
T ss_pred cCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHH
Confidence 764 335531 111234578888888777664 7899999999999999999999765 3456778888888
Q ss_pred cCCC-EEEEEcCeEEEEEeC-CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEE
Q 045882 724 ANEP-VVVKRGYNIVEVKPQ-GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFAC 801 (832)
Q Consensus 724 ~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v 801 (832)
.+++ +.+..|+.++||+|. ++|||.|+++|++.+...+...++++|+|||.+||+||+++..... .+++
T Consensus 246 ~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~---------G~gI 316 (354)
T PLN02151 246 KNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQ---------GLGI 316 (354)
T ss_pred hhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCC---------CccE
Confidence 7776 789999999999996 9999999999999873222345689999999999999999864211 1577
Q ss_pred EeC--CcccccceEeCChhHHHHHHHHhhh
Q 045882 802 TVG--QKPSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 802 ~vG--~~~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
.|| .++|.|+|+|+++++|..+|+.|+.
T Consensus 317 ~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 317 LVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred EeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 777 6899999999999999999999986
No 17
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=1.7e-33 Score=297.35 Aligned_cols=237 Identities=28% Similarity=0.426 Sum_probs=196.3
Q ss_pred cCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCC
Q 045882 577 TSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTK 654 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~ 654 (832)
+|+++|+|||||||++..+ ....+++++.++|++|++++++.|+|+|||+...+...+ .+++++++++||++++..+
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 5789999999999998532 345678999999999999999999999999988877655 3567899999999998743
Q ss_pred Cc-cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccC-CCCCCchhHHHHHHHHHHHhcCCCEEEEE
Q 045882 655 KS-EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDA-APGFGSCQAKELLDHLESVLANEPVVVKR 732 (832)
Q Consensus 655 ~~-~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~a-d~~~~~~~a~el~~~l~~~l~~~~~~v~~ 732 (832)
.. .|... +.....|++.+.++++++.++ ||+++|+|+++++|||+.+ |++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 32 35442 222247888899999999887 9999999999999999998 77777666666666553 344788899
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe--CCccccc
Q 045882 733 GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV--GQKPSKA 810 (832)
Q Consensus 733 g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v--G~~~s~A 810 (832)
|+.++|++|.++|||.+++.+++.+ ++.++++++|||+.||++||+.+.... .....+++.| |.+++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 888899999999999999999993210 1112378888 8889999
Q ss_pred ceEeCChhHHHHHHHHhh
Q 045882 811 RYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 811 ~y~l~~~~eV~~~L~~l~ 828 (832)
+|+++++++|..+|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
No 18
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=2.5e-33 Score=306.79 Aligned_cols=238 Identities=24% Similarity=0.354 Sum_probs=188.6
Q ss_pred HHhhccCcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEE
Q 045882 572 DAYKRTSRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYY 649 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~ 649 (832)
.+|.+++++++||||||||.+... ....++++++++|++|+++ ..|+|+|||++..+.++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 478999999999999999998543 4556899999999999765 47999999999999999974 469999999999
Q ss_pred EEeCCC----ccEEEc-------------CcccchhHHHHHHHHHHH---HHhcCCceEEeecceeEEEEeccCCCCCCc
Q 045882 650 LRWTKK----SEWETS-------------TVAADFEWKRITEPVMKL---YTEATDGSYIEKKETALVWHYQDAAPGFGS 709 (832)
Q Consensus 650 i~~~~~----~~w~~~-------------~~~~~~~w~~~v~~i~~~---~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~ 709 (832)
++.+.+ ..|..+ .. ...+|.+.+.++++. +++++||+++|+|+++++||||++++++..
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~-~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~ 267 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQ-PASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWP 267 (384)
T ss_pred eecCCCCcccccccccccccccccccccccc-cchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHH
Confidence 986421 112211 11 134677666666665 556779999999999999999999877643
Q ss_pred hhHHHHHHHHHHHhcCCC-EEEEEcCeEEEEEe-CCCCHHHHHHHHHHhhhhCCCCcc-e--EEEEeCChhhHHHHHHcc
Q 045882 710 CQAKELLDHLESVLANEP-VVVKRGYNIVEVKP-QGVTKGLVAEKVLSTMISDGKLPD-F--VLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 710 ~~a~el~~~l~~~l~~~~-~~v~~g~~~vEV~p-~gvnKG~al~~Ll~~l~~~gi~~d-~--vl~~GDd~ND~~Mf~~a~ 784 (832)
. +.+.+...+.+++ +.+..|+.++||+| .++|||.|+++|++++ |+..+ + ++|||||.|||+||+.+.
T Consensus 268 ~----~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~ 340 (384)
T PLN02580 268 L----VAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLR 340 (384)
T ss_pred H----HHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhh
Confidence 3 3444444455555 78899999999999 5999999999999998 77644 3 599999999999999975
Q ss_pred cccCCCCCCCCCcEEEEEeC--CcccccceEeCChhHHHHHHHHhhh
Q 045882 785 QATYGSSLPIAPEIFACTVG--QKPSKARYYLDDEEDVLALLKGLAA 829 (832)
Q Consensus 785 ~~~~~~~~~~~~~~f~v~vG--~~~s~A~y~l~~~~eV~~~L~~l~~ 829 (832)
.... .++|.|| .+.|.|+|+|+++++|..+|+.|+.
T Consensus 341 ~~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 341 EGNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred ccCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 4211 1556555 5789999999999999999999986
No 19
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=4e-33 Score=297.54 Aligned_cols=230 Identities=23% Similarity=0.277 Sum_probs=187.4
Q ss_pred CcEEEEEecCCCcCCCCC--CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHA--LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~ 655 (832)
++++|++||||||++..+ ....++++++++|++|++++|+.|+|+|||+...+.++++.+ .++++++||++++..++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~ 91 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING 91 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC
Confidence 468999999999998432 356789999999999976689999999999999999999876 47799999999987655
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHH-HHhcCCC-EEEEEc
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLE-SVLANEP-VVVKRG 733 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~-~~l~~~~-~~v~~g 733 (832)
..+... .+.+|.+.+...++.+.+++||+++|.|+.+++|||+.++ +. .+...++. .+.+..+ +.+.+|
T Consensus 92 ~~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-----~~~~~~l~~~i~~~~~~~~~~~g 162 (266)
T PRK10187 92 KTHIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-----EDALLALAQRITQIWPQLALQPG 162 (266)
T ss_pred Ceeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-----HHHHHHHHHHHHhhCCceEEeCC
Confidence 433322 2345556666667777888999999999999999998773 21 23333333 2222333 667789
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceE
Q 045882 734 YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYY 813 (832)
Q Consensus 734 ~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~ 813 (832)
+.++||+|+++|||.|++++++++ |+..++++||||+.||++||+++.... .++|+||++++.|+|+
T Consensus 163 ~~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~~----------g~~vavg~a~~~A~~~ 229 (266)
T PRK10187 163 KCVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRLG----------GISVKVGTGATQASWR 229 (266)
T ss_pred CEEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhcC----------CeEEEECCCCCcCeEe
Confidence 999999999999999999999999 999999999999999999999994321 1799999999999999
Q ss_pred eCChhHHHHHHHHhhhh
Q 045882 814 LDDEEDVLALLKGLAAA 830 (832)
Q Consensus 814 l~~~~eV~~~L~~l~~~ 830 (832)
++++++|..+|+.|++.
T Consensus 230 l~~~~~v~~~L~~l~~~ 246 (266)
T PRK10187 230 LAGVPDVWSWLEMITTA 246 (266)
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 99999999999999864
No 20
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.95 E-value=2.2e-26 Score=246.27 Aligned_cols=225 Identities=18% Similarity=0.218 Sum_probs=159.7
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCc-eEEEeCCEEEEeCCCc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENL-GIAAEHGYYLRWTKKS 656 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l-~liaenGa~i~~~~~~ 656 (832)
..|+|++|+||||++ .++.+++++.++|+++ +++|+.|+|+|||+...+.+.+..+... ++|++||+++++.++.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 579999999999999 6777999999999999 7899999999999999999999988643 7999999999998544
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhc--CCceEEeecceeEEE-----------------EeccCC--CC---CC----
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEA--TDGSYIEKKETALVW-----------------HYQDAA--PG---FG---- 708 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~--~~gs~ie~k~~~l~~-----------------~~~~ad--~~---~~---- 708 (832)
.+...++ .+.+..+++...+. .+..+.......... .....+ .+ +.
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 4444443 45566666665332 111221111100000 000000 00 00
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEEcCe-EEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccccc
Q 045882 709 SCQAKELLDHLESVLANEPVVVKRGYN-IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 709 ~~~a~el~~~l~~~l~~~~~~v~~g~~-~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
.....++...+.+.+......+.++.. .+||+|+|+|||.|+++|++++ |+++++|+||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~-- 226 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL-- 226 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe--
Confidence 011223333444444333455555554 4999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHHHhhh
Q 045882 788 YGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLKGLAA 829 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~~l~~ 829 (832)
+|+||++ +..|++++ ++.++|.+.|+++..
T Consensus 227 ------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 ------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred ------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 5666764 57788665 467889999998753
No 21
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.95 E-value=5.8e-26 Score=243.77 Aligned_cols=223 Identities=16% Similarity=0.204 Sum_probs=153.5
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC----ceEEEeCCEEEEeC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN----LGIAAEHGYYLRWT 653 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~----l~liaenGa~i~~~ 653 (832)
+.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+.+++. .++|+.||+.|+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 468999999999998 6778999999999999 689999999999999999998887652 36999999999864
Q ss_pred --CCccEEEcCcccchhHHHHHHHHHHHHHhcC--------CceEEeeccee-----------EEEEecc---CCCC--C
Q 045882 654 --KKSEWETSTVAADFEWKRITEPVMKLYTEAT--------DGSYIEKKETA-----------LVWHYQD---AAPG--F 707 (832)
Q Consensus 654 --~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~--------~gs~ie~k~~~-----------l~~~~~~---ad~~--~ 707 (832)
+...+...++. +.+..+++...+.. .+.+...+... +...+.. .++. .
T Consensus 78 ~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALSY------DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCCH------HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 23345444442 33444444432211 11222111100 0000000 0000 0
Q ss_pred ------C-chhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHH
Q 045882 708 ------G-SCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDM 779 (832)
Q Consensus 708 ------~-~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~M 779 (832)
. .....++...+...+.. .+. +.+++.++||.|+++|||+|+++|++++ |+++++++||||+.||++|
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~M 227 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKE-RYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAM 227 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcC-cEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHH
Confidence 0 00112222333332222 233 4567789999999999999999999999 9999999999999999999
Q ss_pred HHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHHHHhh
Q 045882 780 FESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 780 f~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
|+.++. +++||++ +..|+|++. +.++|.++|+++.
T Consensus 228 l~~ag~--------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYAGV--------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhCCc--------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 999986 4556653 678999884 5788999998874
No 22
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.95 E-value=2.9e-26 Score=246.50 Aligned_cols=223 Identities=17% Similarity=0.213 Sum_probs=154.0
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc-
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS- 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~- 656 (832)
.|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+.+.+..++ ..++|+.||+.|++..+.
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 58999999999998 6778999999999999 68999999999999999999988875 357899999999964333
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcC--------CceEEeecce---------eEEEEecc---CC-CCC------C-
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEAT--------DGSYIEKKET---------ALVWHYQD---AA-PGF------G- 708 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~--------~gs~ie~k~~---------~l~~~~~~---ad-~~~------~- 708 (832)
.+...++ .+.+..+++...+.. .+.+...... ...+...+ .. ... .
T Consensus 78 l~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 151 (272)
T PRK15126 78 LHRQDLP------ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGD 151 (272)
T ss_pred EEeecCC------HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECC
Confidence 4444443 345555555443211 1111110000 00000000 00 000 0
Q ss_pred chhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccccc
Q 045882 709 SCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 709 ~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
.....++...+.+.+.. .+. +.++..++||.|+++|||+|+++|++++ |+++++++||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~-- 225 (272)
T PRK15126 152 HDDLTRLQIQLNEALGE-RAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR-- 225 (272)
T ss_pred HHHHHHHHHHHHHHhcC-CEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC--
Confidence 01122333344433322 233 3466789999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCCCcEEEEEeCCc----ccccce--Ee--CChhHHHHHHHHhhh
Q 045882 788 YGSSLPIAPEIFACTVGQK----PSKARY--YL--DDEEDVLALLKGLAA 829 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~s~A~y--~l--~~~~eV~~~L~~l~~ 829 (832)
+++||++ +..|+| ++ ++.++|.++|+++..
T Consensus 226 ------------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 ------------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 4556653 566776 55 467889999998764
No 23
>PRK10976 putative hydrolase; Provisional
Probab=99.94 E-value=3.1e-26 Score=245.37 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=151.8
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc-
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS- 656 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~- 656 (832)
.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..++ ..++|+.||+.++..++.
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 58999999999998 6778999999999999 68999999999999999999888876 346899999999874332
Q ss_pred cEEEcCcccchhHHHHHHHHHHHHHhcCCce--EEeecceeE-----------------EEEec---cCCC-CCC-----
Q 045882 657 EWETSTVAADFEWKRITEPVMKLYTEATDGS--YIEKKETAL-----------------VWHYQ---DAAP-GFG----- 708 (832)
Q Consensus 657 ~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs--~ie~k~~~l-----------------~~~~~---~ad~-~~~----- 708 (832)
.+...++ .+.+.++++...+. ++. .+...+..+ .+... ...+ ...
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 78 IFSHNLD------RDIASDLFGVVHDN-PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred ehhhcCC------HHHHHHHHHhhccc-CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 3333333 34566666554321 111 111111000 00000 0000 000
Q ss_pred ---chhHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 709 ---SCQAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 709 ---~~~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
.....++.+.+.+.+.. .+. +.++..++||.|+++|||.|+++|++++ |+++++|+||||+.||++||+.++
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag 226 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGD-RVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAG 226 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCC-cEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcC
Confidence 00111223333333322 233 3567789999999999999999999999 999999999999999999999999
Q ss_pred cccCCCCCCCCCcEEEEEeCCc--ccccc--eEe--CChhHHHHHHHHhh
Q 045882 785 QATYGSSLPIAPEIFACTVGQK--PSKAR--YYL--DDEEDVLALLKGLA 828 (832)
Q Consensus 785 ~~~~~~~~~~~~~~f~v~vG~~--~s~A~--y~l--~~~~eV~~~L~~l~ 828 (832)
.+ |+|.++.. +..|+ +++ ++.++|.++|+++.
T Consensus 227 ~~------------vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 227 KG------------CIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CC------------eeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 64 44444432 56666 665 46788999999875
No 24
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.93 E-value=5.1e-25 Score=236.63 Aligned_cols=226 Identities=15% Similarity=0.099 Sum_probs=152.4
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC--ceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN--LGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~--l~liaenGa~i~~~~~ 655 (832)
.+|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+.+.+..++. .++|++||+.|+...+
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 579999999999998 5677889999999999 789999999999999999999888753 4699999999997643
Q ss_pred c-------cEEEcCcccchhHHHHHHHHHHHHHhcCCceE-Eeecce-----eEEEEe------ccCCCC---CCchhHH
Q 045882 656 S-------EWETSTVAADFEWKRITEPVMKLYTEATDGSY-IEKKET-----ALVWHY------QDAAPG---FGSCQAK 713 (832)
Q Consensus 656 ~-------~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~-ie~k~~-----~l~~~~------~~ad~~---~~~~~a~ 713 (832)
. .+...++ .+.+..+++.+.+...-.+ ...... .....+ ...... +......
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 1222222 3455566655433211000 000000 000000 000000 0000001
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCC---CcceEEEEeCChhhHHHHHHcccccCCC
Q 045882 714 ELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGK---LPDFVLCVGDDRSDEDMFESISQATYGS 790 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi---~~d~vl~~GDd~ND~~Mf~~a~~~~~~~ 790 (832)
+....+.+.+....+.+..+..++||+|+++|||+|+++|++++ |+ ++++|+||||+.||++||+.++.
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~----- 227 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY----- 227 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE-----
Confidence 12222333332224555556679999999999999999999999 99 99999999999999999999984
Q ss_pred CCCCCCcEEEEEeCCc----------ccccceEeC--ChhHHHHHHHHhhhh
Q 045882 791 SLPIAPEIFACTVGQK----------PSKARYYLD--DEEDVLALLKGLAAA 830 (832)
Q Consensus 791 ~~~~~~~~f~v~vG~~----------~s~A~y~l~--~~~eV~~~L~~l~~~ 830 (832)
+|+||+. +..|.|+++ +.+++.+.|+.+..+
T Consensus 228 ---------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 ---------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred ---------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 6677632 225778886 567999999988754
No 25
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=1.1e-24 Score=228.15 Aligned_cols=212 Identities=19% Similarity=0.179 Sum_probs=148.5
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCC--C
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTK--K 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~--~ 655 (832)
.|+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||+...+.+.+..++ ..++|++||+.++... .
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (230)
T PRK01158 3 IKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGK 78 (230)
T ss_pred eeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCC
Confidence 58999999999998 6778999999999999 68999999999999999998887775 3579999999998763 2
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhcCCceE--Eeec--ceeE--EEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEATDGSY--IEKK--ETAL--VWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~--ie~k--~~~l--~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
..+....+ .+..+++.+.+..+... +... .... ...+. . ....++.+.++.. ...+.
T Consensus 79 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~l~~~--~~~~~ 141 (230)
T PRK01158 79 RIFLGDIE--------ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRR----T---VPVEEVRELLEEL--GLDLE 141 (230)
T ss_pred EEEEcchH--------HHHHHHHHHHHhccccceeeecCCcccccceeeecc----c---ccHHHHHHHHHHc--CCcEE
Confidence 23333221 22333333322222111 1100 0000 00011 0 0112233333321 12345
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---
Q 045882 730 VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--- 806 (832)
Q Consensus 730 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--- 806 (832)
+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 142 ~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~ 204 (230)
T PRK01158 142 IVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADEE 204 (230)
T ss_pred EEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccHH
Confidence 5556678999999999999999999999 9999999999999999999999985 4566664
Q ss_pred -ccccceEeC--ChhHHHHHHHHhh
Q 045882 807 -PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 807 -~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
+..|+|++. +.++|.+.|+++.
T Consensus 205 vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 205 LKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHhcceEecCCCcChHHHHHHHHh
Confidence 577999884 5678999998763
No 26
>PLN02887 hydrolase family protein
Probab=99.93 E-value=9.8e-25 Score=252.92 Aligned_cols=231 Identities=18% Similarity=0.203 Sum_probs=157.9
Q ss_pred HHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC---c------
Q 045882 570 IVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN---L------ 640 (832)
Q Consensus 570 i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~---l------ 640 (832)
.+..|+ .+.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..++. .
T Consensus 300 ~~~~~~-~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYK-PKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhc-cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 344554 4789999999999998 6788999999999999 789999999999999999988876541 2
Q ss_pred -eEEEeCCEEEEeCCCc-cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEE---------EE--ec--c---
Q 045882 641 -GIAAEHGYYLRWTKKS-EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALV---------WH--YQ--D--- 702 (832)
Q Consensus 641 -~liaenGa~i~~~~~~-~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~---------~~--~~--~--- 702 (832)
++|+.||+.|++..+. .+...++ .+.+..+++...+..-...+...+..+. ++ +. .
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~ 448 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEI 448 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccc
Confidence 4667799999864433 4554444 3556666665443211111111111000 00 00 0
Q ss_pred ---CC---C--CCC----chh----HHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcce
Q 045882 703 ---AA---P--GFG----SCQ----AKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDF 766 (832)
Q Consensus 703 ---ad---~--~~~----~~~----a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~ 766 (832)
.+ . ... ... ..++...+.+.+...-..+.++..++||+|+++|||.|+++|++++ |+++++
T Consensus 449 i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~ee 525 (580)
T PLN02887 449 MSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDE 525 (580)
T ss_pred cCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHH
Confidence 00 0 000 000 1122233333332222234567789999999999999999999999 999999
Q ss_pred EEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHHHhh
Q 045882 767 VLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLKGLA 828 (832)
Q Consensus 767 vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~~l~ 828 (832)
|+||||+.||++||+.+|. +|+||++ +..|+|++ ++.++|.++|++++
T Consensus 526 viAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 526 IMAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999985 5666664 67899988 46788999998864
No 27
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.93 E-value=2.4e-24 Score=227.04 Aligned_cols=216 Identities=21% Similarity=0.290 Sum_probs=156.2
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc-EE
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE-WE 659 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~-w~ 659 (832)
||+|+||||++ .+..++++++++|++| +++|+.++++|||+...+.+++..++ ..++|+.||+.+....+.. +.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 6777999999999999 67899999999999999999999887 4699999999994444433 34
Q ss_pred EcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEE------------------EE-ec--cC--CCC-------CCc
Q 045882 660 TSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALV------------------WH-YQ--DA--APG-------FGS 709 (832)
Q Consensus 660 ~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~------------------~~-~~--~a--d~~-------~~~ 709 (832)
..++ .+.+..+++...+..-...+...+.... +. .. .. ... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 4443 3556666666654321111111111000 00 00 00 000 001
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCC
Q 045882 710 CQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYG 789 (832)
Q Consensus 710 ~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~ 789 (832)
.+..++.+.+...+.+.-..+.+++.++||.|+++|||.|+++|++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 234456666666665433556788999999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCCcEEEEEeCCc----ccccceEeCC--hhHHHHHH
Q 045882 790 SSLPIAPEIFACTVGQK----PSKARYYLDD--EEDVLALL 824 (832)
Q Consensus 790 ~~~~~~~~~f~v~vG~~----~s~A~y~l~~--~~eV~~~L 824 (832)
+|+||++ +..|+|++.+ .++|++.|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 6777775 6789998853 36787765
No 28
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.93 E-value=5.3e-25 Score=226.29 Aligned_cols=194 Identities=27% Similarity=0.358 Sum_probs=150.2
Q ss_pred EEEEecCCCcCCCCCCC-CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEE
Q 045882 581 AIFLDYDGTVVPHHALI-KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWE 659 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~-~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~ 659 (832)
+|++|+||||++ .+ ..+++++.++|++| .++|+.++|+|||+...+.+++..+ +.++|++||++++..++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 44 67999999999999 4678999999999999999999875 488999999999987666666
Q ss_pred EcCcccc-h---hHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC-CCEEEE-Ec
Q 045882 660 TSTVAAD-F---EWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN-EPVVVK-RG 733 (832)
Q Consensus 660 ~~~~~~~-~---~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~-~~~~v~-~g 733 (832)
. +... . .|.+.+..++..+.+.+++..++.+...+.+++... +.......++...++....+ ..+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1 111233344445556678888888999999999864 11112233455555444222 346666 69
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 734 YNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 734 ~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+.++||+|++++||.+++.+++++ |++++++++|||+.||++||+.++.+
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999999 89999999999999999999999864
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.92 E-value=4.3e-24 Score=239.85 Aligned_cols=301 Identities=16% Similarity=0.129 Sum_probs=208.5
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH
Q 045882 174 RLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL 253 (832)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll 253 (832)
...+..|...++.++.++.+..+ .|+||+|+++.+.++...+. ..+++.+++|+++.... + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 44678888888888765433334 49999999998877766543 36788899999875421 0 01122333455
Q ss_pred hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--
Q 045882 254 NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-- 331 (832)
Q Consensus 254 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 331 (832)
.+|.+.+.+.++++.++ ..+ .+ ++|+|||+...... +........+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 67877766533221110 111 23 79999997532111 11123344555655
Q ss_pred -CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 332 -KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 332 -~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+++|.++.. .++..++.++ +.++.+. ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~~------~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAEG------DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhCC------CC
Confidence 478999999999999999999999999988888876 9989865421 1222232222 2222211 12
Q ss_pred cEEEecCC-CCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC
Q 045882 411 PVILIDRP-VPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS 489 (832)
Q Consensus 411 pv~~~~~~-v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~ 489 (832)
.|.+++.. ++.+++.++|++||+|++||.+||||++++|||||+ .|+|+|+.+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-------------------~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-------------------KPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-------------------CCEEEcCCCCchhhcc
Confidence 36666543 489999999999999999999999999999999994 4799999999888883
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHH
Q 045882 490 ---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 490 ---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (832)
.|++++ +.+++|++|.+++++ +++++.+.++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 377876 467899999999985 455666667777776 568999999988877654
No 30
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.92 E-value=9.5e-24 Score=226.69 Aligned_cols=224 Identities=17% Similarity=0.205 Sum_probs=152.6
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCC-C
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTK-K 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~-~ 655 (832)
+.|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..++ ..++|+.||+.++... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 368999999999998 6778999999999999 68899999999999999999988876 3469999999999743 3
Q ss_pred c-cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeE------------EEE----------eccCCC-------
Q 045882 656 S-EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETAL------------VWH----------YQDAAP------- 705 (832)
Q Consensus 656 ~-~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l------------~~~----------~~~ad~------- 705 (832)
. .+...++ .+.+..+++...+..-...+...+..+ .|. +...+.
T Consensus 78 ~~l~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLP------VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCC------HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 3 2333333 345666666554321111111100000 000 000000
Q ss_pred -C--CCc---h-hHHHHHHHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhH
Q 045882 706 -G--FGS---C-QAKELLDHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDE 777 (832)
Q Consensus 706 -~--~~~---~-~a~el~~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~ 777 (832)
. ... . ...++....+.+.....+. +.++..++||.|+++|||.|++++++++ |++++++++|||+.||+
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi 228 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDI 228 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhH
Confidence 0 000 0 0011112222222223333 3345578999999999999999999999 99999999999999999
Q ss_pred HHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHHHHhh
Q 045882 778 DMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALLKGLA 828 (832)
Q Consensus 778 ~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L~~l~ 828 (832)
+||+.++. +|+||++ +..|+|+++ +.++|.++|+++.
T Consensus 229 ~m~~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 229 SMLEAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HHHHhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 99999985 5666664 567899884 5778999998764
No 31
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.91 E-value=1.8e-23 Score=222.69 Aligned_cols=216 Identities=19% Similarity=0.234 Sum_probs=148.5
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC-ceEEEeCCEEEEeCC-CccE
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN-LGIAAEHGYYLRWTK-KSEW 658 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~-l~liaenGa~i~~~~-~~~w 658 (832)
+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||+...+.+.+..++. .++|+.||+.++..+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 6778999999999999 678999999999999999999988763 489999999999764 3345
Q ss_pred EEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEE-------------Eecc---C-C-----CC-CC-------
Q 045882 659 ETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVW-------------HYQD---A-A-----PG-FG------- 708 (832)
Q Consensus 659 ~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~-------------~~~~---a-d-----~~-~~------- 708 (832)
...++ .+.+..+++.+.+..-...+...+..... .+.. . + .+ ..
T Consensus 77 ~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLD------LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCC------HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 44444 35566666655443211111111110000 0000 0 0 00 00
Q ss_pred chhHHHHHHHHHH-HhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 709 SCQAKELLDHLES-VLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 709 ~~~a~el~~~l~~-~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
.....++...+.+ .+. ..+. +.++..++||.|+++|||.|++.+++.+ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELE-ENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhc-CCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc-
Confidence 0011223333321 111 2233 4577889999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCCCcEEEEEeCCc----ccccceEeC--ChhHHHHHH
Q 045882 787 TYGSSLPIAPEIFACTVGQK----PSKARYYLD--DEEDVLALL 824 (832)
Q Consensus 787 ~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~--~~~eV~~~L 824 (832)
+++||++ +..|+|++. +.++|.++|
T Consensus 226 -------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 226 -------------GVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred -------------eeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 4566653 567889885 456777653
No 32
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.91 E-value=7.3e-23 Score=236.74 Aligned_cols=294 Identities=17% Similarity=0.191 Sum_probs=194.4
Q ss_pred CCEEEEeCcccccHHHHHHhhc----CCCeEEEEecCCCCC----hhhhhcC--Cc-------------hHHHHHHHHhC
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRF----HRVKLGFFLHSPFPS----SEIYRTL--PV-------------RNEILKALLNA 255 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~----~~~~ig~flH~PfP~----~e~~r~l--p~-------------r~~il~~ll~~ 255 (832)
.|+|++||+|..++|.+++++. .++++.++.|..-.. .+.+..+ |. ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 3999999999999999998663 468999999975211 1111111 10 11122356667
Q ss_pred CEEeecChhhHHHHHHHHHHHhCCcccccCceeeEE--EcCeEEEEEEeecCCCchHHHhhcCC-----------CChHH
Q 045882 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE--YFGRTIYVKILHVGIHMGRLESALNH-----------PSSSI 322 (832)
Q Consensus 256 dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~ 322 (832)
|.|.--++.|++..... ..|. ++. +..+..++.++|+|||++.|.+.... .....
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 76666666555543210 0000 000 01123468889999999988653110 01122
Q ss_pred HHHHHHHHcC----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHH
Q 045882 323 KVKEIREQFK----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITK 398 (832)
Q Consensus 323 ~~~~l~~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~ 398 (832)
..+.++++++ +.++|++|||+++.||+..+++|+++++++ +. .|+++|.+. + .++++++++++
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~----~lvivG~g~----~---~~~~~l~~l~~ 333 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GG----QLVLLGTGD----P---ELEEAFRALAA 333 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--CC----EEEEEecCc----H---HHHHHHHHHHH
Confidence 2345666662 568999999999999999999999998764 33 488787431 1 24456666665
Q ss_pred HHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEe
Q 045882 399 RINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVI 478 (832)
Q Consensus 399 ~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (832)
+.+. .+.++.+. +.+....+|++||+||+||.+||||++.+|||+| +.|+|+
T Consensus 334 ~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V~ 385 (466)
T PRK00654 334 RYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPIV 385 (466)
T ss_pred HCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEEE
Confidence 5431 24444443 5566779999999999999999999999999999 457899
Q ss_pred ccCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 479 SEFIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITM--SDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 479 Se~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
|..+|+.+.+ + +|++|+|.|+++++++|.++++. .++.++...++.. ...+++..-++++++-.+++
T Consensus 386 ~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 386 RRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred eCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999999988 3 38999999999999999999863 2222222222222 24677777777776655543
No 33
>PLN02939 transferase, transferring glycosyl groups
Probab=99.91 E-value=1.8e-22 Score=239.42 Aligned_cols=317 Identities=15% Similarity=0.139 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEecCC-----CCChhhhh-cCCc--
Q 045882 179 AYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRR-----FHRVKLGFFLHSP-----FPSSEIYR-TLPV-- 244 (832)
Q Consensus 179 ~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~-----~~~~~ig~flH~P-----fP~~e~~r-~lp~-- 244 (832)
-|.-+.+..++.+... .+| |||++||+|..++|.++.+. +.++++.|++|-- ||...+.. -+|+
T Consensus 592 RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 3444444444444332 345 89999999999985554432 4568999999953 22211111 1221
Q ss_pred -------------hHHHH-HHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchH
Q 045882 245 -------------RNEIL-KALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGR 310 (832)
Q Consensus 245 -------------r~~il-~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~ 310 (832)
+-.++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||++.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceehhh
Confidence 11223 3577789988888888887654 11011110 12234457788999999999
Q ss_pred HHhhcCC-------C----ChHHHHHHHHHHcC------CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEE
Q 045882 311 LESALNH-------P----SSSIKVKEIREQFK------GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLV 373 (832)
Q Consensus 311 ~~~~~~~-------~----~~~~~~~~l~~~~~------~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 373 (832)
|.+.... . ........++++++ +.++|++|||+++.||+..++.|+.++++ ++. .||
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dv----qLV 812 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGG----QFV 812 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCC----EEE
Confidence 8753210 0 01122445777772 35899999999999999999999998875 333 488
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeee
Q 045882 374 QIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTIC 453 (832)
Q Consensus 374 qi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 453 (832)
++|.+ ++ ..+++++.+++.+.+.. ..|.++ +.++......+|++||+||+||.+|||||+++|||+|
T Consensus 813 IvGdG-----p~-~~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy 879 (977)
T PLN02939 813 LLGSS-----PV-PHIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY 879 (977)
T ss_pred EEeCC-----Cc-HHHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC
Confidence 88743 22 13456666666665321 125554 4567777789999999999999999999999999999
Q ss_pred ecCCCCchhhhhhhcCCCCCceEEeccCccccccCC------------CceEeCCCCHHHHHHHHHHHhcC---CHHHHH
Q 045882 454 RQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS------------GAIRVNPWDIDAVADALHDAITM---SDVEKQ 518 (832)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~------------~a~~VnP~d~~~~A~ai~~aL~m---~~~e~~ 518 (832)
+.|+|++..+|+.+.+. +|++++|.|+++++++|.+++.. .++.++
T Consensus 880 -------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~ 940 (977)
T PLN02939 880 -------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWK 940 (977)
T ss_pred -------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHH
Confidence 44789999999987662 48999999999999999999862 334333
Q ss_pred HHHHHHHhhhhcCCHHHHHHHHHHHHHHHH
Q 045882 519 LRHEKHYRYICSHDVAYWAHSFMQDLERAC 548 (832)
Q Consensus 519 ~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 548 (832)
...++. ....+++...++.+++-..++.
T Consensus 941 ~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 941 QLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 333222 2356888888888876665543
No 34
>PLN02316 synthase/transferase
Probab=99.91 E-value=2.3e-22 Score=242.86 Aligned_cols=307 Identities=14% Similarity=0.104 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEecCCCCChhhhhcCCchHHHHH
Q 045882 177 WRAYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRR-----FHRVKLGFFLHSPFPSSEIYRTLPVRNEILK 250 (832)
Q Consensus 177 w~~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~-----~~~~~ig~flH~PfP~~e~~r~lp~r~~il~ 250 (832)
..-|..+++..++.+... .+| |||++||+|..++|.++++. +.++++.+++|-.- | .+..+-.
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk~ 757 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIGK 757 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHHH
Confidence 344555555555544332 245 99999999999999999875 35689999999431 1 1122446
Q ss_pred HHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcC--CC-----C----
Q 045882 251 ALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALN--HP-----S---- 319 (832)
Q Consensus 251 ~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~--~~-----~---- 319 (832)
++..||.|.--++.|++..+.. ..+ ..+..++.++|+|||++.|.+... .| +
T Consensus 758 ~l~~AD~ViTVS~tya~EI~~~----~~l-------------~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~ 820 (1036)
T PLN02316 758 AMAYADKATTVSPTYSREVSGN----SAI-------------APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVE 820 (1036)
T ss_pred HHHHCCEEEeCCHHHHHHHHhc----cCc-------------ccccCCEEEEECCccccccCCcccccccccCCchhhhh
Confidence 7888999998888888766531 000 112346778999999998764311 01 0
Q ss_pred -hHHHHHHHHHHcC----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHH
Q 045882 320 -SSIKVKEIREQFK----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETY 394 (832)
Q Consensus 320 -~~~~~~~l~~~~~----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~ 394 (832)
.......++++++ +.++|++|+||++.||+..++.|+.++++. + +.||++|.+ ++ ..++.++.
T Consensus 821 gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l~ 888 (1036)
T PLN02316 821 GKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDFV 888 (1036)
T ss_pred hhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHHH
Confidence 0122445677762 578999999999999999999999999863 3 337777743 33 24567778
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCc
Q 045882 395 TITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTS 474 (832)
Q Consensus 395 ~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 474 (832)
+++.+++..+.. .|.+.. ..+......+|++||+||+||..|||||+.+|||+| +.
T Consensus 889 ~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------Gt 944 (1036)
T PLN02316 889 NLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------GS 944 (1036)
T ss_pred HHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------CC
Confidence 888877654421 254443 344433348999999999999999999999999999 34
Q ss_pred eEEeccCccccccC-C---------------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHH
Q 045882 475 MLVISEFIGCSPSL-S---------------GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWA 537 (832)
Q Consensus 475 ~lV~Se~~G~s~~l-~---------------~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~ 537 (832)
|+|++..+|..+.+ + +|++|+|.|++++++||.+||......+....+..++.+ ..+++..-+
T Consensus 945 ppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A 1024 (1036)
T PLN02316 945 IPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPA 1024 (1036)
T ss_pred CeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 78999999999987 2 489999999999999999999864332333233334443 457888888
Q ss_pred HHHHHHHHHH
Q 045882 538 HSFMQDLERA 547 (832)
Q Consensus 538 ~~~l~~l~~~ 547 (832)
+.+++-.+++
T Consensus 1025 ~~Y~~LY~~a 1034 (1036)
T PLN02316 1025 LDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHH
Confidence 8887665554
No 35
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.90 E-value=3.8e-23 Score=215.66 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=142.6
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCC--ccE
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKK--SEW 658 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~--~~w 658 (832)
|++|+||||++ .++.+++++.++|++| +++|+.|+++|||+...+.+++..++ ..++|++||+.++..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 6678999999999999 78999999999999999998888776 56899999999988653 345
Q ss_pred EEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEE
Q 045882 659 ETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVE 738 (832)
Q Consensus 659 ~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vE 738 (832)
...++ ..|............+.....+. . ...........+ .+.+...+ +.+. ..+.+.++..++|
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-------~~~~~~~~-~~~~-~~~~~~~~~~~~e 142 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSRLKVQYP-R-RASLVKMRYGID-------VDTVREII-KELG-LNLVAVDSGFDIH 142 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhhhccccc-c-ccceEEEeecCC-------HHHHHHHH-HhcC-ceEEEecCCcEEE
Confidence 54332 22322111100000000000000 0 001111110001 11122212 2121 1233335667999
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL 814 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l 814 (832)
|.|+++|||.+++++++++ |++++++++|||+.||++||+.++. +++||++ +..|+|++
T Consensus 143 i~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~vt 205 (225)
T TIGR01482 143 ILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYVT 205 (225)
T ss_pred EeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCeec
Confidence 9999999999999999999 9999999999999999999999985 5666664 57899987
Q ss_pred C--ChhH----HHHHHHHh
Q 045882 815 D--DEED----VLALLKGL 827 (832)
Q Consensus 815 ~--~~~e----V~~~L~~l 827 (832)
. +.++ |.+.|+++
T Consensus 206 ~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 206 ESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCCCcHHHHHHHHHHhh
Confidence 4 5667 88888765
No 36
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.90 E-value=6.9e-23 Score=212.48 Aligned_cols=207 Identities=18% Similarity=0.219 Sum_probs=141.2
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC-ceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN-LGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~-l~liaenGa~i~~~~~~~ 657 (832)
.|+|++|+||||++ .++.+++++.++|++| +++|+.|+|+|||++..+.+.+..++. .++|++||+.+++.+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 37999999999998 6778999999999999 688999999999999999998887764 479999999999865432
Q ss_pred EEEcCcccchhHHHH-HHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeE
Q 045882 658 WETSTVAADFEWKRI-TEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNI 736 (832)
Q Consensus 658 w~~~~~~~~~~w~~~-v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~ 736 (832)
... +. ...|... .... .+....-.... ......+... .. ..+++...+ ....+.+..+...
T Consensus 77 ~~~--~~-~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~---~~----~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLA--NM-EEEWFLDEEKKK--RFPRDRLSNEY--PRASLVIMRE---GK----DVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEe--cc-cchhhHHHhhhh--hhhhhhccccc--ceeEEEEecC---Cc----cHHHHHHHH----HhCCeEEEecCce
Confidence 111 11 1111100 0000 01000000000 0011111110 10 112233333 2334555556678
Q ss_pred EEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccce
Q 045882 737 VEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARY 812 (832)
Q Consensus 737 vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y 812 (832)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.++. +++||+. +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999985 5566653 678999
Q ss_pred EeC--ChhHHHHHH
Q 045882 813 YLD--DEEDVLALL 824 (832)
Q Consensus 813 ~l~--~~~eV~~~L 824 (832)
+++ +.++|.++|
T Consensus 202 v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 202 VTSNPYGEGVVEVL 215 (215)
T ss_pred EcCCCCCchhhhhC
Confidence 985 456677654
No 37
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.90 E-value=4.3e-22 Score=224.42 Aligned_cols=269 Identities=18% Similarity=0.264 Sum_probs=197.7
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhC
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLG 278 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 278 (832)
.|+|+||+.. .+...++++.|++++.+.+|..|. ++.++ .++.|.+.+. +...++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 445667888999999999997762 22221 3566666554 33333321 11
Q ss_pred CcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCHHHHHHH
Q 045882 279 LDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGISLKLLA 355 (832)
Q Consensus 279 ~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi~~~l~A 355 (832)
...++.++|+|||...|.+.. ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 012467799999988775321 12233444 367899999999999999999999
Q ss_pred HHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcce
Q 045882 356 MEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCI 435 (832)
Q Consensus 356 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~v 435 (832)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .++ +.+.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 9999966533222334566777777666532 254 456789999999999999999
Q ss_pred eccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---Cce-EeCCCCHHHHHHHHHHHh
Q 045882 436 VNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAI-RVNPWDIDAVADALHDAI 510 (832)
Q Consensus 436 vtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~-~VnP~d~~~~A~ai~~aL 510 (832)
+||. .||||++++|||||+ .|+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G-------------------~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAG-------------------KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHcC-------------------CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 599999999999994 4699999999888773 365 678999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHH
Q 045882 511 TMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (832)
+.++. ..+.++.++++ ..+++...++++++.++.
T Consensus 343 ~d~~~--~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPEL--TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87643 44556666554 668988889988887764
No 38
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.90 E-value=1.8e-22 Score=231.84 Aligned_cols=315 Identities=16% Similarity=0.129 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHHHHh-CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChh--hhh------------c
Q 045882 177 WRAYVSANKVFADKIMEVI-NPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE--IYR------------T 241 (832)
Q Consensus 177 w~~Y~~vN~~fa~~v~~~~-~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e--~~r------------~ 241 (832)
|.....+...+.+.+.+.. +| |+|++|+++..++..++++.. ++|+.++.|....... +.+ .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4333444444444443322 34 999999988777777776655 5789999997532210 000 0
Q ss_pred CCchH-HHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCCh
Q 045882 242 LPVRN-EILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSS 320 (832)
Q Consensus 242 lp~r~-~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~ 320 (832)
++.+- .....+..+|.|...+...+..-+. ...+ -...++.++|+|||++.|.+....+..
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~~~---------------~~~~ki~vIpnGvd~~~f~~~~~~~~~ 232 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA---LYDS---------------YQPERMQVIPPGVDLSRFYPPQSSEET 232 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hccC---------------CCccceEEECCCcChhhcCCCCccccc
Confidence 01110 0112344566655544322211110 0000 123467789999999998753221111
Q ss_pred HHHHHHHHHHc--CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHH----HHHHHHH
Q 045882 321 SIKVKEIREQF--KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQ----DAKLETY 394 (832)
Q Consensus 321 ~~~~~~l~~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~----~l~~ev~ 394 (832)
......+++.. .++++|++|||+++.||+..+|+||.++.+..+.. ++++ .+|... ..+.++ ++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~ 307 (439)
T TIGR02472 233 SEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVL 307 (439)
T ss_pred hhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHH
Confidence 11112222221 46789999999999999999999998643221111 2222 344211 111111 2223344
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----CcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCC
Q 045882 395 TITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA----ECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVC 470 (832)
Q Consensus 395 ~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~ 470 (832)
.+++++ +- ...+.+.+.++.+++.++|+.| |+||+||.+||||++++|||||+
T Consensus 308 ~~~~~~----~l---~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G---------------- 364 (439)
T TIGR02472 308 LLIDRY----DL---YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG---------------- 364 (439)
T ss_pred HHHHHc----CC---CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----------------
Confidence 444443 22 2234456788999999999988 99999999999999999999994
Q ss_pred CCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHH
Q 045882 471 PRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 471 ~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l 544 (832)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++. +++++...++.++++ ..+++..-++.+++-|
T Consensus 365 ---~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 365 ---LPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 4799999999998883 48999999999999999999984 455666667777766 4578888787776654
No 39
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.90 E-value=1.8e-22 Score=215.15 Aligned_cols=219 Identities=15% Similarity=0.079 Sum_probs=147.8
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc--
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE-- 657 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~-- 657 (832)
+|++|+||||++ .++.+.+.+.++|++| ++.|+.|+|+|||+...+.+++..++ ..++|++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999998 4452444699999999 68899999999999999999998876 3689999999999865432
Q ss_pred ---EEEcCcccchhHHHHHHHHHHHHHhcCCceEEe-ecce--------eE-------EEEeccCCCCCCchhHHHHHHH
Q 045882 658 ---WETSTVAADFEWKRITEPVMKLYTEATDGSYIE-KKET--------AL-------VWHYQDAAPGFGSCQAKELLDH 718 (832)
Q Consensus 658 ---w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie-~k~~--------~l-------~~~~~~ad~~~~~~~a~el~~~ 718 (832)
|... ...+ .+.+.++++.+.+..+..+.. .... .+ ... ......+ .. ..+....
T Consensus 77 ~~~~~~~---~~i~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVIA---LGIP-YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REYSETI-LW-SEERRER 149 (256)
T ss_pred CCeEEEE---cCCC-HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-CccCCce-ec-ChHHHHH
Confidence 2211 1222 256667776554332111100 0000 00 000 0000000 01 1233344
Q ss_pred HHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCC--cceEEEEeCChhhHHHHHHcccccCCCCCCCCC
Q 045882 719 LESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKL--PDFVLCVGDDRSDEDMFESISQATYGSSLPIAP 796 (832)
Q Consensus 719 l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~--~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~ 796 (832)
+...+....+.+..+..++||.|+++|||.|++++++++ |++ .+++++|||+.||++||+.++.
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~----------- 215 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL----------- 215 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE-----------
Confidence 444444444555556679999999999999999999999 998 9999999999999999999986
Q ss_pred cEEEEEeCCcc-------cc--cc-eEe--CChhHHHHHHHHh
Q 045882 797 EIFACTVGQKP-------SK--AR-YYL--DDEEDVLALLKGL 827 (832)
Q Consensus 797 ~~f~v~vG~~~-------s~--A~-y~l--~~~~eV~~~L~~l 827 (832)
+|+||++. .. |. |++ ++.++|.+.|+++
T Consensus 216 ---~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 ---AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred ---EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 45555542 22 34 666 4678999999876
No 40
>PRK14098 glycogen synthase; Provisional
Probab=99.90 E-value=3.4e-22 Score=231.48 Aligned_cols=318 Identities=14% Similarity=0.134 Sum_probs=210.8
Q ss_pred HhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhhc------CCCeEEEEecCCC-----CChhhhhcC
Q 045882 175 LLWRAYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRRF------HRVKLGFFLHSPF-----PSSEIYRTL 242 (832)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~~------~~~~ig~flH~Pf-----P~~e~~r~l 242 (832)
+....|.-.++..++.+.+. ++| |+|++||+|..++|.+++++. .++|+.++.|... |.......+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34556666666666655442 355 999999999999999998764 4789999999742 211111113
Q ss_pred Cch------------HHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchH
Q 045882 243 PVR------------NEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGR 310 (832)
Q Consensus 243 p~r------------~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~ 310 (832)
|.. .-+-.++..||.|---++.|++...+....-.|++. ....+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 311 112235777888777777777654320000001110 00112446788999999998
Q ss_pred HHhhcCCCC------------hHHHHHHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEE
Q 045882 311 LESALNHPS------------SSIKVKEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLV 373 (832)
Q Consensus 311 ~~~~~~~~~------------~~~~~~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 373 (832)
|.+... +. .......+++++ +++++|++|+|+++.||++.+++|+.++++. + +.|+
T Consensus 268 ~~p~~d-~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lv 340 (489)
T PRK14098 268 WNPSTD-KLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLV 340 (489)
T ss_pred cCCccc-ccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEE
Confidence 875321 10 011233455555 2568999999999999999999999998753 3 4488
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeee
Q 045882 374 QIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTIC 453 (832)
Q Consensus 374 qi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~ 453 (832)
++|.+ +. .+++++++++++.. + .|.+. +.++.+++..+|++||+||+||..||||++.+|||+|
T Consensus 341 ivG~G-----~~--~~~~~l~~l~~~~~------~--~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~ 404 (489)
T PRK14098 341 ICGSG-----DK--EYEKRFQDFAEEHP------E--QVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY 404 (489)
T ss_pred EEeCC-----CH--HHHHHHHHHHHHCC------C--CEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC
Confidence 88842 21 24456666665531 1 25444 4688899999999999999999999999999999999
Q ss_pred ecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHH
Q 045882 454 RQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-------GAIRVNPWDIDAVADALHDAITM--SDVEKQLRHEKH 524 (832)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-------~a~~VnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~ 524 (832)
+.|+|++..+|+.+.+. +|++++|.|+++++++|.+++.+ .++..+...++
T Consensus 405 -------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~- 464 (489)
T PRK14098 405 -------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLE- 464 (489)
T ss_pred -------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH-
Confidence 44689999999988772 48999999999999999998743 22222221111
Q ss_pred HhhhhcCCHHHHHHHHHHHHHHH
Q 045882 525 YRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 525 ~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
.....+++..-++++++-.+++
T Consensus 465 -~~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 465 -AMERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred -HhcCCCChHHHHHHHHHHHHHH
Confidence 1235677777777776655543
No 41
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.90 E-value=1.1e-22 Score=215.91 Aligned_cols=222 Identities=17% Similarity=0.224 Sum_probs=151.1
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~~ 655 (832)
+.+|++|+||||+++.+.+...++++.++++++ .++|+.++++|||+...+......++ ...+|++||+.|+.++.
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~ 79 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGA 79 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCC
Confidence 358999999999975434567789999999999 68899999999999999999866543 23489999999987541
Q ss_pred c----cEEEcCcccchhHH-HHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC--CE
Q 045882 656 S----EWETSTVAADFEWK-RITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE--PV 728 (832)
Q Consensus 656 ~----~w~~~~~~~~~~w~-~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~--~~ 728 (832)
. .|.... ...|. +.+..+...+....+....+.+...+.+.... + .+.++...+.+.+... .+
T Consensus 80 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~---~----~~~~~~~~l~~~l~~~~~~~ 149 (249)
T TIGR01485 80 EVPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDP---E----AAPEVIKQLTEMLKETGLDV 149 (249)
T ss_pred CcCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEech---h----hhhHHHHHHHHHHHhcCCCE
Confidence 1 111111 11233 22333333333333444344445555555431 1 1223445555555433 23
Q ss_pred E-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc
Q 045882 729 V-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKP 807 (832)
Q Consensus 729 ~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~ 807 (832)
. +.+++.++||+|+++|||.|++++++.+ |++++.+++|||+.||++||+.++. .+|+|+++.
T Consensus 150 ~~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~ 213 (249)
T TIGR01485 150 KLIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQ 213 (249)
T ss_pred EEEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCH
Confidence 3 4678899999999999999999999999 9999999999999999999998432 356666642
Q ss_pred ----cc-------cceEeC--ChhHHHHHHHHh
Q 045882 808 ----SK-------ARYYLD--DEEDVLALLKGL 827 (832)
Q Consensus 808 ----s~-------A~y~l~--~~~eV~~~L~~l 827 (832)
.. ..|+.+ ..+++++.|+++
T Consensus 214 ~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 214 EELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 125554 367888888765
No 42
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.89 E-value=7.5e-22 Score=228.91 Aligned_cols=291 Identities=16% Similarity=0.182 Sum_probs=197.0
Q ss_pred CEEEEeCcccccHHHHHHhhcC--CCeEEEEecCCCCC----hhhhhcCCch--------------H-HHHHHHHhCCEE
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFH--RVKLGFFLHSPFPS----SEIYRTLPVR--------------N-EILKALLNADLI 258 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~--~~~ig~flH~PfP~----~e~~r~lp~r--------------~-~il~~ll~~dli 258 (832)
|+|++||+|..++|.++++... ++++.++.|...+. .+.+..++.. - -+-.++..||.|
T Consensus 130 DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 209 (473)
T TIGR02095 130 DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRV 209 (473)
T ss_pred CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcC
Confidence 9999999999999999988765 38999999976421 1222211111 0 122356667777
Q ss_pred eecChhhHHHHHHHHHHHhCCcccccCceeeEE--EcCeEEEEEEeecCCCchHHHhhcCCC-----------ChHHHHH
Q 045882 259 GFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE--YFGRTIYVKILHVGIHMGRLESALNHP-----------SSSIKVK 325 (832)
Q Consensus 259 gf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~~-----------~~~~~~~ 325 (832)
..-++.|++..... ..+. +++ +..+..++.++|+|||.+.|.+..... .......
T Consensus 210 ~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 277 (473)
T TIGR02095 210 TTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKE 277 (473)
T ss_pred eecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHH
Confidence 66666665544321 0000 000 011334678899999999886431100 0112234
Q ss_pred HHHHHcC-----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 045882 326 EIREQFK-----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRI 400 (832)
Q Consensus 326 ~l~~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 400 (832)
.++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+.+|.+. +++++++++++.+.
T Consensus 278 ~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~-------~~~~~~l~~~~~~~ 344 (473)
T TIGR02095 278 ALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD-------PELEEALRELAERY 344 (473)
T ss_pred HHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC-------HHHHHHHHHHHHHC
Confidence 5666662 6789999999999999999999999987642 4488887432 23455666666442
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc
Q 045882 401 NETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480 (832)
Q Consensus 401 N~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (832)
+. .+.++. .++.+++..+|++||++++||..||||++.+|||+| +.|+|+|.
T Consensus 345 ~~--------~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-------------------G~pvI~s~ 396 (473)
T TIGR02095 345 PG--------NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-------------------GTVPIVRR 396 (473)
T ss_pred CC--------cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-------------------CCCeEEcc
Confidence 21 144443 467888899999999999999999999999999999 44799999
Q ss_pred CccccccC-C--------CceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 481 FIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITM---SDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 481 ~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m---~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
.+|..+.+ + +|++++|.|+++++++|.+++.+ .++.++...++.. ...+++...++++++-.+
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 99999988 2 37999999999999999999873 2333333222222 245777777777765443
No 43
>PRK14099 glycogen synthase; Provisional
Probab=99.89 E-value=1.5e-21 Score=225.87 Aligned_cols=297 Identities=17% Similarity=0.150 Sum_probs=190.6
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhh-cCCCeEEEEecCC-----CCChhhhhc--CCch-------------HHHHHHHH
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRR-FHRVKLGFFLHSP-----FPSSEIYRT--LPVR-------------NEILKALL 253 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~-~~~~~ig~flH~P-----fP~~e~~r~--lp~r-------------~~il~~ll 253 (832)
++| |||++||+|..++|.+++.+ ..++++.++.|.. ||. ..+.. +|.. .-+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 355 99999999999999999753 3467899999964 221 11111 1110 01233456
Q ss_pred hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCC-----C------hHH
Q 045882 254 NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHP-----S------SSI 322 (832)
Q Consensus 254 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~-----~------~~~ 322 (832)
.||.|---++.|++...+.- .-.|++. .+..+..++.++|+|||++.|.+..... . ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 66666555555554432100 0000000 0011234678899999999887532100 0 011
Q ss_pred HHHHHHHHcC-----CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 045882 323 KVKEIREQFK-----GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTIT 397 (832)
Q Consensus 323 ~~~~l~~~~~-----~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv 397 (832)
....++++++ +.++|++|+|+++.||+..+++|+.+++++ + +.|+++|.+ + .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G-----~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSG-----D--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecC-----C--HHHHHHHHHHH
Confidence 2345666662 357888999999999999999999998753 3 348888742 2 13455666665
Q ss_pred HHHhcccCCCCcccEEEecCCCCHHHHHHHH-HhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceE
Q 045882 398 KRINETYGVPGYEPVILIDRPVPLHEKTAYY-ALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSML 476 (832)
Q Consensus 398 ~~iN~~~~~~~~~pv~~~~~~v~~~el~aly-~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~l 476 (832)
++. + + .++++.+. .+++..+| +.||+||+||.+|||||+.+|||+|+ .++
T Consensus 346 ~~~----~--~--~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G-------------------~pp 396 (485)
T PRK14099 346 QAY----P--G--QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG-------------------AVP 396 (485)
T ss_pred HHC----C--C--CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC-------------------CCc
Confidence 542 2 1 24344444 67888877 57999999999999999999999994 367
Q ss_pred EeccCccccccC-C-----------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 477 VISEFIGCSPSL-S-----------GAIRVNPWDIDAVADALHDAIT--MSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 477 V~Se~~G~s~~l-~-----------~a~~VnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|+|..+|..+.+ . +|++|+|.|+++++++|.+|+. ..++.++...++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889999998876 2 4899999999999999998543 13333333333322 356788888888777
Q ss_pred HHHHHH
Q 045882 543 DLERAC 548 (832)
Q Consensus 543 ~l~~~~ 548 (832)
-.+++.
T Consensus 475 lY~~l~ 480 (485)
T PRK14099 475 LYRSLV 480 (485)
T ss_pred HHHHHH
Confidence 666554
No 44
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.89 E-value=4.2e-21 Score=217.87 Aligned_cols=287 Identities=17% Similarity=0.179 Sum_probs=206.2
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhc---CCc--hHHHH--HHHHhCCEEeecChhhHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT---LPV--RNEIL--KALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~---lp~--r~~il--~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.|+|++|++....++.++++. .++++.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+....+.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 499999997766666666554 467899999965421111110 121 11222 2456789999999887777653
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCC
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKG 348 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KG 348 (832)
. .+. ...++.++|+|||.+.|.+. + ....+.++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPG----D----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCC----c----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 2 121 12367789999999887532 1 11233444 36789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCCh-hHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTG-KDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAY 427 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~al 427 (832)
+..+++|++++++++|+ .++.|+++|.+. +++ +.. +++++++++.+ ....+.+.+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~--~~~~l~ivG~~~-~~g~~~~----~~l~~~~~~~~-------l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPD--RNLRVIVVGGPS-GSGLATP----DALIELAAELG-------IADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCC--cceEEEEEeCCC-CCcchHH----HHHHHHHHHcC-------CCceEEECCCCCHHHHHHH
Confidence 99999999999999887 246689898654 223 333 34444444432 2233445668999999999
Q ss_pred HHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHH
Q 045882 428 YALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (832)
Q Consensus 428 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ 504 (832)
|+.||+|++||..||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|++++|+
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 360 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACG-------------------TPVVAARVGGLPVAVADGETGLLVDGHDPADWAD 360 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcC-------------------CCEEEecCCCcHhhhccCCceEECCCCCHHHHHH
Confidence 999999999999999999999999994 4699999999888773 389999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
+|.++++. ++.+....++.++++..+++...++.+++-..++
T Consensus 361 ~i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 361 ALARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999984 4555555666677778888888888887766543
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.89 E-value=9.3e-22 Score=222.87 Aligned_cols=302 Identities=16% Similarity=0.174 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCC--hhh-hh-cCCch--------HH
Q 045882 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPS--SEI-YR-TLPVR--------NE 247 (832)
Q Consensus 180 Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~--~e~-~r-~lp~r--------~~ 247 (832)
...+.+.......+.++| |+|+.| +.+....++++.+|++++..++|..+-. .+. |. ..+.+ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
T cd03818 71 GQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHh
Confidence 333333333332344556 899999 5666777899999999988877643311 110 10 11111 11
Q ss_pred ---HHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHH
Q 045882 248 ---ILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKV 324 (832)
Q Consensus 248 ---il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~ 324 (832)
....+-.+|.+...+......|.+. + ..++.++|+|||.+.|.+... . .
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~~-------------------~---~~ki~vI~ngvd~~~f~~~~~---~---~ 198 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPAE-------------------L---RSRISVIHDGIDTDRLRPDPQ---A---R 198 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcHh-------------------h---ccceEEeCCCccccccCCCch---h---h
Confidence 2345677888777665444433210 0 135778999999998864211 1 1
Q ss_pred HHHHHH---cCCCEEEEEecc-ccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 045882 325 KEIREQ---FKGKKVIVGVDD-MDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRI 400 (832)
Q Consensus 325 ~~l~~~---~~~~~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 400 (832)
..++.. ..++++|++++| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.+++
T Consensus 199 ~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~ 274 (396)
T cd03818 199 LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDEL 274 (396)
T ss_pred hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHh
Confidence 111111 146789999998 9999999999999999999999877 89888532111110000001112233333
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc
Q 045882 401 NETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480 (832)
Q Consensus 401 N~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (832)
+.+.+. ..|+ +.+.++.+++.++|+.||++|+||..||+|++++|||||+ .|+|+|.
T Consensus 275 ~~~~~~---~~V~-f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G-------------------~PVIas~ 331 (396)
T cd03818 275 GGRLDL---SRVH-FLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG-------------------CLVVGSD 331 (396)
T ss_pred hcccCc---ceEE-EeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC-------------------CCEEEcC
Confidence 332221 2354 4578999999999999999999999999999999999994 4799999
Q ss_pred CccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHH
Q 045882 481 FIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFM 541 (832)
Q Consensus 481 ~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l 541 (832)
.+|..+.+. .|++|+|.|++++|++|.++++.+ +++....++.++++.+ ++....+++++
T Consensus 332 ~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 332 TAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999888883 489999999999999999999854 5556667777887766 67666565554
No 46
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.89 E-value=9.7e-22 Score=211.45 Aligned_cols=226 Identities=15% Similarity=0.115 Sum_probs=150.9
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCc
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKS 656 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~ 656 (832)
..|+|++|+||||++ .++.+++.+.++|++| ++.|+.++|+|||+...+...+..++ ..++|+.||++|+..++.
T Consensus 3 ~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 3 MKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred cceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 368999999999998 5667888999999999 68899999999999999999988875 357999999999875431
Q ss_pred -------------cEEEcCcccchhHHHHHHHHHHHHHhcCCceE-Eeecc--------eeEEE---E-ecc--CCCCCC
Q 045882 657 -------------EWETSTVAADFEWKRITEPVMKLYTEATDGSY-IEKKE--------TALVW---H-YQD--AAPGFG 708 (832)
Q Consensus 657 -------------~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~-ie~k~--------~~l~~---~-~~~--ad~~~~ 708 (832)
.|..... .+ .+.+.++++.+.+.....+ ..... ..+.. . ... ....+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PRK00192 79 FPFQPDGERLKGDYWVIELG---PP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFL 154 (273)
T ss_pred cccCCccccccCCceEEEcC---CC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCcee
Confidence 2322211 12 3455555554433211100 00000 00000 0 000 000000
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCc-ceEEEEeCChhhHHHHHHccccc
Q 045882 709 SCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLP-DFVLCVGDDRSDEDMFESISQAT 787 (832)
Q Consensus 709 ~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~-d~vl~~GDd~ND~~Mf~~a~~~~ 787 (832)
.....+..+.+...+...++.+..++.++||.|.+ +||.|++++++++ |+++ +++++|||+.||++||+.++.
T Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~-- 228 (273)
T PRK00192 155 WNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI-- 228 (273)
T ss_pred ecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe--
Confidence 00012334444444444456666677899999999 9999999999999 9999 999999999999999999985
Q ss_pred CCCCCCCCCcEEEEEeCCc----c----ccc-ceEe----CChhHHHHHHHHhhh
Q 045882 788 YGSSLPIAPEIFACTVGQK----P----SKA-RYYL----DDEEDVLALLKGLAA 829 (832)
Q Consensus 788 ~~~~~~~~~~~f~v~vG~~----~----s~A-~y~l----~~~~eV~~~L~~l~~ 829 (832)
+++||++ + ..| +++. ++.++|.+.|+++..
T Consensus 229 ------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 229 ------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred ------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 4555553 2 333 4555 347899999998653
No 47
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.88 E-value=2.2e-21 Score=219.95 Aligned_cols=281 Identities=14% Similarity=0.114 Sum_probs=195.1
Q ss_pred HHhCCCCCEEEEeCcccccH-HHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHH-HHHhCCEEeecChhhHHHHH
Q 045882 193 EVINPEEDYVWIHDYHLMVL-PTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILK-ALLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~ll-p~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~-~ll~~dligf~t~~~~~~Fl 270 (832)
+..+| |+|++|+++.... ...+-.+..++|+.+..|..|+..+... .....+.+ .+-.+|.+.+.+....+.+.
T Consensus 85 ~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 160 (398)
T cd03796 85 IRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTV 160 (398)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHH
Confidence 33456 9999999875543 3333344456899999998765332211 01112222 24467888887776555442
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHH
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~ 350 (832)
.. .+ ....++.++|+|+|.+.|.+... . ..+++++|+++||+.+.||+.
T Consensus 161 ~~----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~ 209 (398)
T cd03796 161 LR----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGID 209 (398)
T ss_pred HH----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHH
Confidence 11 01 11235678999999988863211 0 125678999999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
.+++|+..+.+++|+++ |+.+|. ++..+++ .+++++. + ....+.+.+.++.+++.++|+.
T Consensus 210 ~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l----~~~~~~~----~---l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 210 LLVGIIPEICKKHPNVR----FIIGGD-----GPKRILL----EEMREKY----N---LQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred HHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHH----HHHHHHh----C---CCCeEEEeCCCCHHHHHHHHHh
Confidence 99999999988888876 888874 3333333 3444433 2 1223334578999999999999
Q ss_pred cCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CC-ceEeCCCCHHHHHHHHHH
Q 045882 431 AECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SG-AIRVNPWDIDAVADALHD 508 (832)
Q Consensus 431 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~-a~~VnP~d~~~~A~ai~~ 508 (832)
||++|+||..||||++++|||||+ .|+|+|..+|..+.+ ++ +++++| |.++++++|.+
T Consensus 270 ad~~v~pS~~E~~g~~~~EAma~G-------------------~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~ 329 (398)
T cd03796 270 GHIFLNTSLTEAFCIAIVEAASCG-------------------LLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEE 329 (398)
T ss_pred CCEEEeCChhhccCHHHHHHHHcC-------------------CCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHH
Confidence 999999999999999999999994 469999999998877 34 445544 99999999999
Q ss_pred HhcCCHHHHHHHHHHHHh-hhhcCCHHHHHHHHHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYR-YICSHDVAYWAHSFMQDLERACR 549 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 549 (832)
++.++.+.+.. .++.++ ....++...-++++++..++...
T Consensus 330 ~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 330 AISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99876544333 344444 45668888888888887777543
No 48
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.88 E-value=9.1e-22 Score=207.09 Aligned_cols=214 Identities=17% Similarity=0.206 Sum_probs=146.5
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCCCc-
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTKKS- 656 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~~~- 656 (832)
+|++|+||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+.+..++ ...+|++||+.|+.....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 589999999998 566677666 7776 5 68899999999999999999998764 234999999999765321
Q ss_pred ---cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecce--eEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE-E
Q 045882 657 ---EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKET--ALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV-V 730 (832)
Q Consensus 657 ---~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~--~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~-v 730 (832)
.|... ....|. ... +..+....++..++.+.. ...+++... ++.. ....++.+.+... ...+. +
T Consensus 75 ~~~~~~~~---~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~--~~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQKH---IDHDWR--RQA-VVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ--SQAAKVI 144 (236)
T ss_pred CChhHHHH---HhcCCC--HHH-HHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc--cCCEEEE
Confidence 11100 001121 111 233344566766655442 344555432 2211 1123344444332 12232 4
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---- 806 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---- 806 (832)
.++..++||.|+++|||.|++.|++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 567788999999999999999999999 9999999999999999999999875 5566664
Q ss_pred ccccc----eEeC--ChhHHHHHHHHh
Q 045882 807 PSKAR----YYLD--DEEDVLALLKGL 827 (832)
Q Consensus 807 ~s~A~----y~l~--~~~eV~~~L~~l 827 (832)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 6664 457899998865
No 49
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.88 E-value=2.3e-21 Score=220.15 Aligned_cols=274 Identities=17% Similarity=0.110 Sum_probs=197.7
Q ss_pred CCEEEEeCcccccHHHHHHhh-cCCCeEEEEecCCCCCh-hhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRR-FHRVKLGFFLHSPFPSS-EIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCCSRM 276 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~-~~~~~ig~flH~PfP~~-e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~ 276 (832)
.|+|+.|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 399999988876777777763 22446677889542111 1110 11222333455789887766544443321
Q ss_pred hCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHH
Q 045882 277 LGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAM 356 (832)
Q Consensus 277 l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~ 356 (832)
+|.. ..+|.++|+|||.+.|..... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~~---------------~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGCP---------------PEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCCC---------------HHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 1221 235677999999998853210 0123456799999999999999999999
Q ss_pred HHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCccee
Q 045882 357 EQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIV 436 (832)
Q Consensus 357 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vv 436 (832)
..+.+++|+++ |+++|. |+.. +++++++++.+ ....+.+.|.++.+++..+|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG~-----G~~~----~~l~~~~~~~~-------l~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILGI-----GPWE----RRLRTLIEQYQ-------LEDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888766 888873 3433 34444544432 2335566789999999999999999999
Q ss_pred cccc------cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHH
Q 045882 437 NAVR------DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALH 507 (832)
Q Consensus 437 tS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~ 507 (832)
||.. ||++++++|||+|+ .|+|+|..+|+.+.+. +|++|+|.|++++|++|.
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G-------------------~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVG-------------------IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCC-------------------CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 9984 99999999999994 4699999999988883 489999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHH
Q 045882 508 DAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 545 (832)
+++++++++++...++.++++ ..++....++.+.+-++
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999977777777778888877 45888888887776654
No 50
>PTZ00174 phosphomannomutase; Provisional
Probab=99.88 E-value=1.7e-21 Score=206.32 Aligned_cols=195 Identities=13% Similarity=0.154 Sum_probs=127.5
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC--CC-ceEEEeCCEEEEeC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC--EN-LGIAAEHGYYLRWT 653 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~~-l~liaenGa~i~~~ 653 (832)
.+.|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+.++.. .. .++|+.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 5689999999999999 7788999999999999 6889999999999999998888642 12 36899999999975
Q ss_pred CCccEEEcCcc-cchhHHHHHHHHHHHHHh--------cCCceEEeecceeEEEEec-cCC-----CC---CC--chhHH
Q 045882 654 KKSEWETSTVA-ADFEWKRITEPVMKLYTE--------ATDGSYIEKKETALVWHYQ-DAA-----PG---FG--SCQAK 713 (832)
Q Consensus 654 ~~~~w~~~~~~-~~~~w~~~v~~i~~~~~e--------~~~gs~ie~k~~~l~~~~~-~ad-----~~---~~--~~~a~ 713 (832)
++..+...++. .+. +.+.++++...+ ...+.+++.........+. ... .. +. .....
T Consensus 79 ~~~i~~~~i~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (247)
T PTZ00174 79 GELFHSQSILKFLGE---EKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIRE 155 (247)
T ss_pred CeEEEEEcchhcCCH---HHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHH
Confidence 43334433221 111 233333332211 1123333322111111110 000 00 00 01123
Q ss_pred HHHHHHHHHhcCCCEEEEE-cCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHccc
Q 045882 714 ELLDHLESVLANEPVVVKR-GYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESISQ 785 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~~ 785 (832)
++.+.+.+.+.+..+.... +..++||.|+++|||+|++.|+++ +++|+|||| +.||++||+.++.
T Consensus 156 ~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 156 KFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 4455554444333343333 457999999999999999999986 489999999 8999999998764
No 51
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.88 E-value=7.3e-22 Score=205.65 Aligned_cols=195 Identities=15% Similarity=0.107 Sum_probs=127.9
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-C-ceEEEeCCEEEEeCCCcc-
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-N-LGIAAEHGYYLRWTKKSE- 657 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~-l~liaenGa~i~~~~~~~- 657 (832)
+|++|+||||++ .++.+++.++++|++| +++|+.|+++|||+...+.+++..++ . .++||+||+.|+......
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 4555666699999999 68899999999999999999998875 3 579999999998753221
Q ss_pred ----EEEcCcccchhHHHHHHHHHHHHHhcCCce-EEeecc--------eeEEE------EeccCCCCCCchhHHHHHHH
Q 045882 658 ----WETSTVAADFEWKRITEPVMKLYTEATDGS-YIEKKE--------TALVW------HYQDAAPGFGSCQAKELLDH 718 (832)
Q Consensus 658 ----w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs-~ie~k~--------~~l~~------~~~~ad~~~~~~~a~el~~~ 718 (832)
|... ...+| +.+.++++...+..... ...... ..+.. ..+.....+......+..+.
T Consensus 77 ~~~~~~~~---~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (221)
T TIGR02463 77 EPGYPRII---LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPR 152 (221)
T ss_pred CCCceEEe---cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHH
Confidence 1111 11222 34555555432211000 000000 00000 00000000000001223333
Q ss_pred HHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 719 LESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 719 l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+.+.+...++.+.++..++||.|.+++||.|++++++++ |++++++++|||+.||++||+++|.+
T Consensus 153 ~~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 153 FTALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 344444445556667789999999999999999999999 99999999999999999999999864
No 52
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.87 E-value=2.6e-20 Score=220.64 Aligned_cols=340 Identities=11% Similarity=0.092 Sum_probs=209.2
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCC----Chh-hhhcCC-----
Q 045882 174 RLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFP----SSE-IYRTLP----- 243 (832)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP----~~e-~~r~lp----- 243 (832)
.+.|..-..++...++.+........|+|+.|...--+++..|+++. +++..+..|+.=. .+. .+....
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 34566666666666666654433223999999888888888887776 5888888885411 111 011111
Q ss_pred -ch-HHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCccc-ccCceeeEEEc--CeEEEEEEeecCCCchHHHhhcCCC
Q 045882 244 -VR-NEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYE-SKRGYIGLEYF--GRTIYVKILHVGIHMGRLESALNHP 318 (832)
Q Consensus 244 -~r-~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~-~~~~~~~~~~~--gr~~~i~i~P~GId~~~~~~~~~~~ 318 (832)
.| +.-+..|-.||.|.-.|+.-...-...+.. .+.-.. ...+..++..+ ...-++.++|+|+|+..|.+.....
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~ 518 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKE 518 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchh
Confidence 01 112256777999988775432211111000 000000 00011111111 1123778899999999886532211
Q ss_pred ChH-HHH----------HHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCC-
Q 045882 319 SSS-IKV----------KEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARS- 381 (832)
Q Consensus 319 ~~~-~~~----------~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~- 381 (832)
... ... ...++.+ .++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 519 ~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 519 KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAK 594 (784)
T ss_pred hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCcccc
Confidence 000 000 1112332 368899999999999999999999987744333 3558888865321
Q ss_pred --ChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH----hcCcceecccccCCCCcceeeeeeec
Q 045882 382 --TGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA----LAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 382 --~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~----~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
...+..+..+++.+++++.+. .+ .|.+++...+..+...+|+ .+||||+||.+||||||++|||||+
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~gL----~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG- 667 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQL----HG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG- 667 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhCC----CC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC-
Confidence 111222234456666665432 22 3666553345666666665 2479999999999999999999994
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHhhh-
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAIT---MSDVEKQLRHEKHYRYI- 528 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~---m~~~e~~~r~~~~~~~v- 528 (832)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++ ..++.++...++.++++
T Consensus 668 ------------------lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~ 729 (784)
T TIGR02470 668 ------------------LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIY 729 (784)
T ss_pred ------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 4799999999999883 4899999999999999999874 24555555566666666
Q ss_pred hcCCHHHHHHHHHHHH
Q 045882 529 CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 529 ~~~~~~~W~~~~l~~l 544 (832)
+.+++...++++++.+
T Consensus 730 ~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 730 EKYTWKIYSERLLTLA 745 (784)
T ss_pred HhCCHHHHHHHHHHHH
Confidence 5688888888877654
No 53
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.87 E-value=1.3e-20 Score=218.20 Aligned_cols=284 Identities=15% Similarity=0.173 Sum_probs=197.4
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchH----HHHHH-HHhCCEEeecChhhH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRN----EILKA-LLNADLIGFHTFDYA 266 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~----~il~~-ll~~dligf~t~~~~ 266 (832)
++..+| |+|++|+...+.++.++-.+..++++.+.+|.-+|...-....++.. .+.+. ...+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 444566 99999987766666555334457888888887554321100111100 11121 235788887777666
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc----CCCEEEEEecc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF----KGKKVIVGVDD 342 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~vil~VdR 342 (832)
+.+... +. ....++.++|+|||.+.|.+... . ..+++++ +++++|+++||
T Consensus 218 ~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~---~----~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFR---S----EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHHc-----CC--------------CCcCeEEEeCCccCccccCCccc---c----HHHHHHhcCCCCCCeEEEEeCC
Confidence 555421 10 01235778999999998864321 1 1223333 36789999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 045882 343 MDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLH 422 (832)
Q Consensus 343 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~ 422 (832)
+.+.||+..+++|++++ |+++ |+++| +|+..+ +++++++. .+|.+ .+.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~~----~l~~~~~~----------~~V~f-~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYRE----ELEKMFAG----------TPTVF-TGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHHH----HHHHHhcc----------CCeEE-eccCCHH
Confidence 99999999999888654 6554 88887 344333 34444332 13544 5689999
Q ss_pred HHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC------CceEeCC
Q 045882 423 EKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS------GAIRVNP 496 (832)
Q Consensus 423 el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~------~a~~VnP 496 (832)
++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|+.+.+. +|++++|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-------------------~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMASG-------------------VPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHcC-------------------CCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 99999999999999999999999999999994 4799999999888773 2899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHH-HHHHHHhh
Q 045882 497 WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQD-LERACRDH 551 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~~ 551 (832)
.|++++|++|.++++ .++.++...++.++++.++++...++.+++. -.++...+
T Consensus 385 ~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 385 GDVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 4556666677778888899999999998874 44444433
No 54
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.87 E-value=1e-20 Score=219.59 Aligned_cols=308 Identities=17% Similarity=0.189 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhhc-----CCCeEEEEecCCCCCh----hhhhc--CCc--
Q 045882 179 AYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRRF-----HRVKLGFFLHSPFPSS----EIYRT--LPV-- 244 (832)
Q Consensus 179 ~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~~-----~~~~ig~flH~PfP~~----e~~r~--lp~-- 244 (832)
.|...++...+.+.+. .+| |+|++||+|..++|.++++.. .++++.|..|.+.+.. ..+.. +++
T Consensus 111 ~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 111 RFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 3444444444433332 344 999999999999999998874 5789999999874321 11111 111
Q ss_pred ------------hHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEE--EcCeEEEEEEeecCCCchH
Q 045882 245 ------------RNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLE--YFGRTIYVKILHVGIHMGR 310 (832)
Q Consensus 245 ------------r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~i~P~GId~~~ 310 (832)
..-+..++..||.|..-+..|++..++.- .| .++. ...+..++.++|+|||.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~-~gl~~~~~~~~~ki~~I~NGid~~~ 256 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FG-EGLDGLLRARAGKLSGILNGIDYDV 256 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CC-cchHHHHHhccCCeEEEeCCCcCcc
Confidence 01223456677777666666665543210 00 0000 0112347788999999998
Q ss_pred HHhhcCCC-----------ChHHHHHHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 311 LESALNHP-----------SSSIKVKEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.+++ +.|+.
T Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi 330 (476)
T cd03791 257 WNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVI 330 (476)
T ss_pred cCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEE
Confidence 87532110 1122334566665 46789999999999999999999999987653 44887
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
+|.+. .++++++.+++.+.. ..++++.+ .+.++...+|+.||++++||..||+|++.+|||+|+
T Consensus 331 ~G~g~-------~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G 394 (476)
T cd03791 331 LGSGD-------PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG 394 (476)
T ss_pred EecCC-------HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC
Confidence 87431 134455555555431 13555554 457777899999999999999999999999999994
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHH
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITMS--DVEKQLRHEK 523 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m~--~~e~~~r~~~ 523 (832)
.|+|+|..+|..+.+ + +|+++.|.|+++++++|.++++.. ++++....++
T Consensus 395 -------------------~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~ 455 (476)
T cd03791 395 -------------------TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRN 455 (476)
T ss_pred -------------------CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 468999999999988 3 599999999999999999998643 2332222222
Q ss_pred HHhhhhcCCHHHHHHHHHHH
Q 045882 524 HYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 524 ~~~~v~~~~~~~W~~~~l~~ 543 (832)
..+ ..+++..-++++++-
T Consensus 456 ~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 456 AMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred Hhc--cCCChHHHHHHHHHH
Confidence 222 235666666665543
No 55
>PLN00142 sucrose synthase
Probab=99.86 E-value=5e-20 Score=218.24 Aligned_cols=333 Identities=16% Similarity=0.141 Sum_probs=206.4
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCC-----------CCCh-hhhhc
Q 045882 174 RLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSP-----------FPSS-EIYRT 241 (832)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~P-----------fP~~-e~~r~ 241 (832)
.+.|..-.+++...++.+........|+|+-|.+.--+++..|++++ +++..++.|+- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777666766666654443113999999777778888888776 68999999942 1110 01110
Q ss_pred -CCchHHHHHHHHhCCEEeecChhhHHHHHHHHHHHhCCccccc---------CceeeEEEcCeEEEEEEeecCCCchHH
Q 045882 242 -LPVRNEILKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESK---------RGYIGLEYFGRTIYVKILHVGIHMGRL 311 (832)
Q Consensus 242 -lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~---------~~~~~~~~~gr~~~i~i~P~GId~~~~ 311 (832)
+....| ...|-.||.|.-.|+.-....-... + .|.+- +-..++.+.. -++.++|+|+|...|
T Consensus 463 ~~r~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTAD-LIAMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHH-HHHHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhhc
Confidence 001111 2255567766655533221100000 0 00000 0000111111 267889999999988
Q ss_pred HhhcCCC--------ChHHHH---HHHHHHc-----CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 312 ESALNHP--------SSSIKV---KEIREQF-----KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 312 ~~~~~~~--------~~~~~~---~~l~~~~-----~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
.+..... ...... ...++.+ .++++|++|+|+++.||+..+++||.++.+..|+++ |+++
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~----LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVN----LVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcE----EEEE
Confidence 6422100 000000 0011111 357799999999999999999999998876666544 8888
Q ss_pred ecCCC-CChhHHH--HHHHHHHHHHHHHhcccCCCCcccEEEecC---CCCHHHHHHHHH-hcCcceecccccCCCCcce
Q 045882 376 VNPAR-STGKDVQ--DAKLETYTITKRINETYGVPGYEPVILIDR---PVPLHEKTAYYA-LAECCIVNAVRDGMNLMPY 448 (832)
Q Consensus 376 ~~p~r-~~~~~~~--~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~---~v~~~el~aly~-~ADv~vvtS~~EGmnLv~~ 448 (832)
|.+.. ....+.+ +..+++.+++++.+.. + .|.+++. ..+..++..+|+ ++|+||+||.+||||+|++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 86411 1111211 1223455565554322 2 2555542 455678888777 5799999999999999999
Q ss_pred eeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHH
Q 045882 449 KYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAIT---MSDVEKQLRHE 522 (832)
Q Consensus 449 Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~---m~~~e~~~r~~ 522 (832)
|||||+ .|+|+|..+|+.+.+. +|++|+|.|++++|++|.+++. .+++.++...+
T Consensus 685 EAMA~G-------------------lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~ 745 (815)
T PLN00142 685 EAMTCG-------------------LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISD 745 (815)
T ss_pred HHHHcC-------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 999994 4799999999999883 4899999999999999988763 35555666666
Q ss_pred HHHhhh-hcCCHHHHHHHHHHHH
Q 045882 523 KHYRYI-CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 523 ~~~~~v-~~~~~~~W~~~~l~~l 544 (832)
+.++.+ +.+++...++++++-.
T Consensus 746 ~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 746 AGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHH
Confidence 667776 5688888888877744
No 56
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.86 E-value=6e-20 Score=206.79 Aligned_cols=285 Identities=14% Similarity=0.119 Sum_probs=200.8
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhh-----hcCCchHH-HHHHHHhCCEEeecChhhHHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIY-----RTLPVRNE-ILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~-----r~lp~r~~-il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
.|+|++|++...+.+.+++ +..+.++.+.+|..+|..... ........ ....+..+|.|...+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4999999988776655554 455788999999866532111 00011111 1234566888887777666655421
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi 349 (832)
. -+. ...++.++|+|+|...+.+. . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 011 12357789999999877531 1 12234444 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|++++. ++++ |+.+|.. ++..++.+++++.+.+.+... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 3333 6666532 222345556666665554322 23778888999999999999
Q ss_pred hcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCH------H
Q 045882 430 LAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDI------D 500 (832)
Q Consensus 430 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~------~ 500 (832)
.|||+|+||..||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G-------------------~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACG-------------------TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcC-------------------CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 9999999999999999999999994 4799999999888773 4899999998 9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHHH
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 547 (832)
+++++|.++++. +++++...++.++++ ..+++..+++++++.++++
T Consensus 341 ~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 341 ELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999874 555555556666665 5689999999888776653
No 57
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.86 E-value=9e-20 Score=204.64 Aligned_cols=207 Identities=12% Similarity=0.133 Sum_probs=156.0
Q ss_pred EEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE
Q 045882 297 IYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ 374 (832)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (832)
.++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677999999988753211 1 111112222 4678999999999999999999999999999987666778998
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 375 IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 375 i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
+|. |+..+ ++++.+++.+ ....+++.+. .+++..+|+.||++|+||..||||++++|||+|+
T Consensus 235 ~G~-----g~~~~----~~~~~~~~~~-------~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G 296 (374)
T TIGR03088 235 VGD-----GPARG----ACEQMVRAAG-------LAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG 296 (374)
T ss_pred ecC-----CchHH----HHHHHHHHcC-------CcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC
Confidence 883 33333 3334444332 2334555553 6789999999999999999999999999999994
Q ss_pred cCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hc
Q 045882 455 QGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CS 530 (832)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~ 530 (832)
.|+|+|+.+|..+.+. .|++++|.|++++|++|.++++. ++.+....++.++++ ..
T Consensus 297 -------------------~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 297 -------------------LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQ 356 (374)
T ss_pred -------------------CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHh
Confidence 4699999999988883 38999999999999999999874 455556666777776 57
Q ss_pred CCHHHHHHHHHHHHHH
Q 045882 531 HDVAYWAHSFMQDLER 546 (832)
Q Consensus 531 ~~~~~W~~~~l~~l~~ 546 (832)
+++...++++.+-.++
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888888877765543
No 58
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.85 E-value=1.2e-19 Score=204.29 Aligned_cols=284 Identities=18% Similarity=0.168 Sum_probs=199.8
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhc-----CCc-hH-HHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRT-----LPV-RN-EILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~-----lp~-r~-~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
|+|++|++....++..+.+.. ++++.+..|........... .+. +. .....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARRL-GIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhhc-CCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 999999988777777666554 68888889975432111000 010 11 11234567999998887666655421
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
.+ ....++.++|+|+|.+.|.+... ....+..+. ...++++|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~---~~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGR---AEARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccc---hhhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 11 01123678999999987754321 111111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|+..+.+++|+++ |+.+|....... .....+++.++++.+. .+-+.+.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELARELGV-------IDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhcCC-------CceEEEeccCCHHHHHHHHHhCC
Confidence 999999988887765 888886542221 2223344555554322 22344567899999999999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDA 509 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~a 509 (832)
++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G-------------------~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l 365 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACG-------------------LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL 365 (398)
T ss_pred EEEecccccccCcHHHHHHhcC-------------------CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999999994 4699999999998882 48999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHH
Q 045882 510 ITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFM 541 (832)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 541 (832)
++. +++++...++.++++ ..++...+++.++
T Consensus 366 ~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 366 LTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 985 455555666667777 7788888887765
No 59
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.85 E-value=1.1e-19 Score=201.20 Aligned_cols=281 Identities=18% Similarity=0.216 Sum_probs=195.1
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHH-HHhCCEEeecChhhHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKA-LLNADLIGFHTFDYARH 268 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~-ll~~dligf~t~~~~~~ 268 (832)
++++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+- ...++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34556677 899999999988888888777777888888854322110 1111111 11234444444444444
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccc
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDI 345 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~ 345 (832)
|+... + -...++.++|+|+|...|... ......+++++ +++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 43210 0 012356778999998877532 11233455554 46789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|+.++.+++|+++ |+++|. +++.++ +.+.+.+.|.. ..|.++ +. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHH
Confidence 9999999999999999888776 888873 233333 33344433211 124454 43 46899
Q ss_pred HHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHH
Q 045882 426 AYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVAD 504 (832)
Q Consensus 426 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ 504 (832)
.+|+.||++++||..||||++++|||+|+ .|+|+|+.+|..+.+ ++|+.++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACE-------------------LPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcC-------------------CCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 99999999999999999999999999994 469999999888888 4589999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
+|.++++.++..+..+.++.......++...+++.+++-.
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777777666665344456788888888877643
No 60
>PLN02382 probable sucrose-phosphatase
Probab=99.85 E-value=5e-20 Score=207.83 Aligned_cols=229 Identities=18% Similarity=0.228 Sum_probs=148.0
Q ss_pred hccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHH-HHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEE
Q 045882 575 KRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVL-RELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYL 650 (832)
Q Consensus 575 ~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i 650 (832)
..+.+.+|++|+||||++.. .++.++.....+| +++ .++|+.++++|||+...+.++...++ ...+|+.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 45678899999999999832 1446776666655 777 67899999999999888877765543 334888899999
Q ss_pred EeCCCc----cEEEcCcccchhHHH-HHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC
Q 045882 651 RWTKKS----EWETSTVAADFEWKR-ITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN 725 (832)
Q Consensus 651 ~~~~~~----~w~~~~~~~~~~w~~-~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~ 725 (832)
+..+.. .|.... +..|.. .+.+.+..+....+....+.+...+.+...+. .+.++...+.+.+..
T Consensus 83 ~~~~~~~~d~~w~~~l---~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~ 152 (413)
T PLN02382 83 AYGESMVPDHGWVEYL---NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEK 152 (413)
T ss_pred EeCCCCccChhHHHHH---hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHh
Confidence 865421 121111 112321 11122222211111122233334444444321 123445555554533
Q ss_pred C--CEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE
Q 045882 726 E--PVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT 802 (832)
Q Consensus 726 ~--~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~ 802 (832)
. .+. +.+++.++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++. ++|+
T Consensus 153 ~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~-------------~gva 219 (413)
T PLN02382 153 RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV-------------YGVM 219 (413)
T ss_pred cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------CEEE
Confidence 2 333 46788999999999999999999999986568899999999999999999999982 2566
Q ss_pred eCCc----cc--------ccceEeC---ChhHHHHHHHHhh
Q 045882 803 VGQK----PS--------KARYYLD---DEEDVLALLKGLA 828 (832)
Q Consensus 803 vG~~----~s--------~A~y~l~---~~~eV~~~L~~l~ 828 (832)
||++ +. .|++++. ..++|.+.|+.+.
T Consensus 220 m~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~ 260 (413)
T PLN02382 220 VSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFN 260 (413)
T ss_pred EcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhC
Confidence 6664 22 2355542 4788999988763
No 61
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.85 E-value=6.8e-20 Score=211.25 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=136.5
Q ss_pred HHHHhhc---cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEe
Q 045882 570 IVDAYKR---TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAE 645 (832)
Q Consensus 570 i~~~y~~---s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liae 645 (832)
++..|.. .++|+|++|+||||++ .++.+++++.++|++| +++|+.|++||||+...+..++..++ ..++|++
T Consensus 404 ~~~~~~~~~~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 404 ARPSRLPSSGQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred hhcccCCCcCceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 3444544 3589999999999999 5566778899999999 68899999999999999999988876 3679999
Q ss_pred CCEEEEeCCC-------------ccEEEcCcccchhHHHHHHHHHHHHHhcCC----------ceEEeeccee-E-----
Q 045882 646 HGYYLRWTKK-------------SEWETSTVAADFEWKRITEPVMKLYTEATD----------GSYIEKKETA-L----- 696 (832)
Q Consensus 646 nGa~i~~~~~-------------~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~----------gs~ie~k~~~-l----- 696 (832)
||+.|+.+++ ..+.... ..+ .+.+.++++...+... ..++...... .
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~---~l~-~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~ 555 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIEL---GMA-YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSR 555 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEc---CCC-HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHH
Confidence 9999998654 1111111 111 2445555554443211 1111110000 0
Q ss_pred --EEEe---ccCC-CC----CCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcce
Q 045882 697 --VWHY---QDAA-PG----FGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDF 766 (832)
Q Consensus 697 --~~~~---~~ad-~~----~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~ 766 (832)
.... +.+. .+ +......+.++.+...+.+..+.+..++.++||. .++|||.|+++|++.+ |++.++
T Consensus 556 ~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~e 631 (694)
T PRK14502 556 LTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGN 631 (694)
T ss_pred hhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccc
Confidence 0000 0000 00 0000112334445554544466677799999999 5999999999999999 898899
Q ss_pred EEEE--eCChhhHHHHHHccc
Q 045882 767 VLCV--GDDRSDEDMFESISQ 785 (832)
Q Consensus 767 vl~~--GDd~ND~~Mf~~a~~ 785 (832)
+++| ||+.||++||++++.
T Consensus 632 ViafalGDs~NDisMLe~Ag~ 652 (694)
T PRK14502 632 IHTFGLGDSENDYSMLETVDS 652 (694)
T ss_pred eEEEEcCCcHhhHHHHHhCCc
Confidence 9999 999999999999985
No 62
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=1e-19 Score=211.10 Aligned_cols=300 Identities=14% Similarity=0.113 Sum_probs=200.3
Q ss_pred ccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh---hhhhc---CCc
Q 045882 171 RFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS---EIYRT---LPV 244 (832)
Q Consensus 171 ~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~---e~~r~---lp~ 244 (832)
.|..-.|....-..-.|. .+...+ |+.|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.
T Consensus 148 ~~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~ 225 (475)
T cd03813 148 SFVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSY 225 (475)
T ss_pred CHHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHH
Confidence 354555543332323322 233333 3459999998766666666655566899999999755421 22211 000
Q ss_pred -hHH-------HH-HHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhc
Q 045882 245 -RNE-------IL-KALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESAL 315 (832)
Q Consensus 245 -r~~-------il-~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~ 315 (832)
+.. +. ..+-.||.|...+....+ .+. .++....++.++|+|||.+.|.+..
T Consensus 226 ~~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~~~-~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~ 285 (475)
T cd03813 226 FRRLWIRFFESLGRLAYQAADRITTLYEGNRE-RQI-------------------EDGADPEKIRVIPNGIDPERFAPAR 285 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEecCHHHHH-HHH-------------------HcCCCHHHeEEeCCCcCHHHcCCcc
Confidence 111 11 122356666554432222 111 1111233677899999999886421
Q ss_pred CCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 045882 316 NHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYT 395 (832)
Q Consensus 316 ~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~ 395 (832)
. . ....++++|+++||+.+.||+..+++|+..+.++.|+++ |+++|... +..++.+++++
T Consensus 286 ~-----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~ 345 (475)
T cd03813 286 R-----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRE 345 (475)
T ss_pred c-----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHH
Confidence 1 0 112467899999999999999999999999999888876 88887432 22355667777
Q ss_pred HHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCce
Q 045882 396 ITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSM 475 (832)
Q Consensus 396 lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~ 475 (832)
++++.|.. ..|.++ + .+++..+|+.||++|+||..|||+++++|||||+ .|
T Consensus 346 li~~l~l~------~~V~f~-G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G-------------------~P 396 (475)
T cd03813 346 LVESLGLE------DNVKFT-G---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG-------------------IP 396 (475)
T ss_pred HHHHhCCC------CeEEEc-C---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC-------------------CC
Confidence 77776532 125554 4 6789999999999999999999999999999994 46
Q ss_pred EEeccCccccccC-C--------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHHH
Q 045882 476 LVISEFIGCSPSL-S--------GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFMQ 542 (832)
Q Consensus 476 lV~Se~~G~s~~l-~--------~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~ 542 (832)
+|+|+.+|+.+.+ . .|++++|.|++++|++|.++++. ++.++...++.++++.+ ++....+++|.+
T Consensus 397 VVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 397 VVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999998887 3 48999999999999999999984 45566666667777766 455666665544
No 63
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.84 E-value=2.5e-19 Score=204.44 Aligned_cols=273 Identities=15% Similarity=0.101 Sum_probs=181.3
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcC-------------CchH--HH-----------
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTL-------------PVRN--EI----------- 248 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~l-------------p~r~--~i----------- 248 (832)
.+| |+|..| +-...+-.+.+.++++|+++++|-|.-+++.+..+ ..+. .+
T Consensus 106 ~~p--Dv~i~~--~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DIFIDT--MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CEEEEc--CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 357 755544 32333334556677899999999443344443221 1111 11
Q ss_pred --HHHHHhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHH
Q 045882 249 --LKALLNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKE 326 (832)
Q Consensus 249 --l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~ 326 (832)
...+-.||.|-..+....+++.+ ..+ ...++.++|+|+|++.|.+.. .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~----~~~----------------~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRS----LWK----------------RNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHH----HhC----------------cCCCcEEEcCCCCHHHhcccc---c-------
Confidence 11244677777766544444432 111 112567789999998775321 0
Q ss_pred HHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC
Q 045882 327 IREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405 (832)
Q Consensus 327 l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~ 405 (832)
....++.+|++++|+.+.||+...|+||.++.+++|+.. .++.|+++|.... .+..++.+++++++++.+.
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l--- 303 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGL--- 303 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCC---
Confidence 012456799999999999999999999999999888631 2466888885321 1122355666666666532
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc
Q 045882 406 VPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS 485 (832)
Q Consensus 406 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s 485 (832)
...+.+.+.++.+++..+|+.||++|.||..||||++++|||||+ .|+|+|..+|..
T Consensus 304 ----~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G-------------------~pvIa~~~ggp~ 360 (419)
T cd03806 304 ----EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG-------------------LIPLAHASGGPL 360 (419)
T ss_pred ----CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC-------------------CcEEEEcCCCCc
Confidence 223344568999999999999999999999999999999999994 468899887865
Q ss_pred cc-CC------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHH
Q 045882 486 PS-LS------GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVA 534 (832)
Q Consensus 486 ~~-l~------~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~ 534 (832)
+. +. .|++++ |++++|++|.+++++++++++.+.++.++....++..
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 43 33 378873 9999999999999998877766544444444545543
No 64
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.84 E-value=3.7e-19 Score=202.31 Aligned_cols=288 Identities=10% Similarity=0.062 Sum_probs=186.3
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeE-EEEecCCCCChhhhhcCCchHHHH----HHHHhCCEEeecChhh
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKL-GFFLHSPFPSSEIYRTLPVRNEIL----KALLNADLIGFHTFDY 265 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~i-g~flH~PfP~~e~~r~lp~r~~il----~~ll~~dligf~t~~~ 265 (832)
++...+| |+|+.|++...++..+..... .+++ ....|. ++... +..++ +.+..++++.-.+. +
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-h
Confidence 4455567 899999999877766665554 3444 444565 33211 12221 12344455433232 3
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEecccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMD 344 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld 344 (832)
..+.....+.+.. .++-...+|.++|+|||+.+|.+....+ ...+..++..+ .+.++|++|+|+.
T Consensus 343 v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~ 408 (578)
T PRK15490 343 MSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFV 408 (578)
T ss_pred hhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEe
Confidence 3333322222110 0011234678899999999886532111 11122222223 3457899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 045882 345 IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEK 424 (832)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el 424 (832)
+.||+..+++|+.++++++|+++ |+++|. |+.. +++++++++.+.. ..|+|++ . .+++
T Consensus 409 ~~Kg~~~LI~A~a~llk~~pdir----LvIVGd-----G~~~----eeLk~la~elgL~------d~V~FlG-~--~~Dv 466 (578)
T PRK15490 409 GDKNPFAWIDFAARYLQHHPATR----FVLVGD-----GDLR----AEAQKRAEQLGIL------ERILFVG-A--SRDV 466 (578)
T ss_pred hhcCHHHHHHHHHHHHhHCCCeE----EEEEeC-----chhH----HHHHHHHHHcCCC------CcEEECC-C--hhhH
Confidence 99999999999999999999876 888883 3433 3444555443321 1255554 3 5789
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCCCHHH
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPWDIDA 501 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~d~~~ 501 (832)
..+|+.||+||+||.+||||++++|||+|+ .|+|+|..+|+.+.+ + +|++|+|.|.++
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~G-------------------lPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVG-------------------VPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhC-------------------CCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999999999999999999999999994 479999999999887 2 489999999999
Q ss_pred HHHHHHHHhcCCH--HHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHH
Q 045882 502 VADALHDAITMSD--VEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 502 ~A~ai~~aL~m~~--~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 545 (832)
+++++..+..+.. ..+....++.++++ ..++....++.+++.+.
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 9998854433222 22333445667766 45888888888776654
No 65
>PLN02423 phosphomannomutase
Probab=99.83 E-value=2.6e-19 Score=189.07 Aligned_cols=191 Identities=19% Similarity=0.163 Sum_probs=123.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC-CC--ceEEEeCCEEEEeCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC-EN--LGIAAEHGYYLRWTKK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~~--l~liaenGa~i~~~~~ 655 (832)
++++++|+||||++ .++.+++++.++|++| ++. +.|+++|||+...+.+.|+.. .. .++|++||+++...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45677999999998 6788999999999999 455 999999999999998888764 21 4789999999986543
Q ss_pred ccEEEcCcccchhHHHHHHHHHHHHHhc--------CCceEEeecceeEEEE--eccCCCC---------CCchhHHHHH
Q 045882 656 SEWETSTVAADFEWKRITEPVMKLYTEA--------TDGSYIEKKETALVWH--YQDAAPG---------FGSCQAKELL 716 (832)
Q Consensus 656 ~~w~~~~~~~~~~w~~~v~~i~~~~~e~--------~~gs~ie~k~~~l~~~--~~~ad~~---------~~~~~a~el~ 716 (832)
..+...++. .++ .+.+.++++...+. ..+.+++..+...... +.+.... .......++.
T Consensus 82 ~i~~~~l~~-~l~-~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 159 (245)
T PLN02423 82 LIGTQSLKS-FLG-EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMV 159 (245)
T ss_pred EEEEecccc-cCC-HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHH
Confidence 333322211 111 24455555443221 1244444332222111 1111000 0011123344
Q ss_pred HHHHHHhcCCCEE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHcc
Q 045882 717 DHLESVLANEPVV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESIS 784 (832)
Q Consensus 717 ~~l~~~l~~~~~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~ 784 (832)
..+.+.+.+..+. ..+|..++||+|+|+|||.|++.|+ ++++|++||| +.||++||+.-+
T Consensus 160 ~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~ 224 (245)
T PLN02423 160 SVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESER 224 (245)
T ss_pred HHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCC
Confidence 4444444332333 2345689999999999999999996 5799999999 899999999754
No 66
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.83 E-value=4e-19 Score=198.12 Aligned_cols=274 Identities=17% Similarity=0.112 Sum_probs=190.1
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCC----CChhhhhcCCchHHHH-HHHHhCCEEeecChhh
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPF----PSSEIYRTLPVRNEIL-KALLNADLIGFHTFDY 265 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~Pf----P~~e~~r~lp~r~~il-~~ll~~dligf~t~~~ 265 (832)
+++..+| |+|++|+.+..+....+.++ .++++.+.+|.-. +.............+. ..+-.+|.+-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4566677 89999977654444444333 4678888888422 1111111000111222 2345678888877655
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDI 345 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~ 345 (832)
.+.+... +. ...++.++|+|+|.+.+.+.. ...+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5544321 21 123566799999988775321 0134678999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++++.+ ..+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARALG-------LGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHcC-------CCCeEEECCCCCHHHHH
Confidence 9999999999999998888766 888873 3322 34444544432 12234556789999999
Q ss_pred HHHHhcCcceeccc------ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCC
Q 045882 426 AYYALAECCIVNAV------RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNP 496 (832)
Q Consensus 426 aly~~ADv~vvtS~------~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP 496 (832)
.+|+.||++|+||. .||||++++|||+|+ .|+|+|+.+|..+.+. .|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-------------------VPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcC-------------------CCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 599999999999994 4799999999988772 4899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHH
Q 045882 497 WDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFM 541 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 541 (832)
.|+++++++|.++++. ++.+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999999999884 445555566667776 4688888877664
No 67
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.83 E-value=3.2e-19 Score=197.83 Aligned_cols=264 Identities=13% Similarity=0.092 Sum_probs=177.9
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHH-HHHHHhCCEEeecChhhHHHH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEI-LKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~i-l~~ll~~dligf~t~~~~~~F 269 (832)
+.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+ ...+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3344555 8999999987777777766666666677788776544332221111001 112334566655554443333
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEecccccc
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIF 346 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~ 346 (832)
... ....++.++|+|+|...+.... ..... ++++ .++.+|+++||+++.
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~~---~~~~~----~~~~~~~~~~~~i~~vGr~~~~ 204 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFNE---EIRKK----RRELGILEDKFVIGHVGRFSEQ 204 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCCc---hhhhH----HHHcCCCCCCEEEEEEeccccc
Confidence 210 0123577899999998875321 11111 2222 578899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|+..+.+++|+++ |+.+|. ++..+.+++. +++. +.. ..|.+++ . .+++..
T Consensus 205 Kg~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~----~~~~----~~~--~~v~~~g-~--~~~~~~ 262 (358)
T cd03812 205 KNHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKK----VKEL----GLE--DKVIFLG-V--RNDVPE 262 (358)
T ss_pred cChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHH----HHhc----CCC--CcEEEec-c--cCCHHH
Confidence 999999999999999998876 888873 3333333333 3322 211 1255544 4 678999
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHHHHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDIDAVAD 504 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~~~A~ 504 (832)
+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+. ++++..+.+++++|+
T Consensus 263 ~~~~adi~v~ps~~E~~~~~~lEAma~G-------------------~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~ 323 (358)
T cd03812 263 LLQAMDVFLFPSLYEGLPLVLIEAQASG-------------------LPCILSDTITKEVDLTDLVKFLSLDESPEIWAE 323 (358)
T ss_pred HHHhcCEEEecccccCCCHHHHHHHHhC-------------------CCEEEEcCCchhhhhccCccEEeCCCCHHHHHH
Confidence 9999999999999999999999999994 5799999999988884 355666667899999
Q ss_pred HHHHHhcCCHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHY 525 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~ 525 (832)
+|.++++.++..+..+..+..
T Consensus 324 ~i~~l~~~~~~~~~~~~~~~~ 344 (358)
T cd03812 324 EILKLKSEDRRERSSESIKKK 344 (358)
T ss_pred HHHHHHhCcchhhhhhhhhhc
Confidence 999999988766554433333
No 68
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.83 E-value=3.9e-19 Score=196.92 Aligned_cols=269 Identities=17% Similarity=0.209 Sum_probs=191.7
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
++..+| |+|++|..+...+..++.+. .++++.+.+|-.++....+ . ..+..+|.+.+.+....+.+.
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~------~---~~~~~~~~vi~~s~~~~~~~~- 140 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFRY------N---AIMARGDRVIAVSNFIADHIR- 140 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHHH------H---HHHHhcCEEEEeCHHHHHHHH-
Confidence 344566 89999988766555555443 4789999999766543211 1 224568888776654444443
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCC
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKG 348 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KG 348 (832)
...+. ...++.++|+|+|...|...... ......+++++ .++++++++||+.+.||
T Consensus 141 ---~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 141 ---ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ---HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 11221 12357779999999887543211 11222245554 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYY 428 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly 428 (832)
+..+++|+..+.+++|+++ |+.+|... ..+.+.+++.+.+.+.+.. ..|.+++ . .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHH
Confidence 9999999999988777665 88888542 2233444555454443211 1255544 4 77899999
Q ss_pred HhcCcceecc-cccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHH
Q 045882 429 ALAECCIVNA-VRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (832)
Q Consensus 429 ~~ADv~vvtS-~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ 504 (832)
+.||++++|| ..||||++.+|||+|+ .|+|+|..+|..+.+. .|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAMG-------------------RPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhcC-------------------CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 7899999999999994 4699999988887773 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
+|..++..+++++.+..++.++++.++
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 999888888888888888888887654
No 69
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.83 E-value=1.4e-18 Score=193.96 Aligned_cols=285 Identities=12% Similarity=0.132 Sum_probs=194.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcC---CCeEEEEecCCCCChhhhhcCCc-hHHHHHHHHhCCEEee
Q 045882 185 KVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFH---RVKLGFFLHSPFPSSEIYRTLPV-RNEILKALLNADLIGF 260 (832)
Q Consensus 185 ~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~---~~~ig~flH~PfP~~e~~r~lp~-r~~il~~ll~~dligf 260 (832)
+.+.+.+ +..+| |+|++|.+....++.++.++.. +.++.+.+|..-.. ....-+. +.-+...+-.+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 4444443 45566 8999998876666666654332 67888888843111 1111121 2223345667999998
Q ss_pred cChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEE
Q 045882 261 HTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVI 337 (832)
Q Consensus 261 ~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vi 337 (832)
.+......+... .+ ...++.++|+|+|...+.+.. . ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~----~~----------------~~~~i~vi~n~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYEL----FD----------------ITKEIEVIPNFVDEDRFRPKP-----D---EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHh----cC----------------CcCCEEEecCCcCHhhcCCCc-----h---HHHHHhcCCCCCCeEE
Confidence 888766655421 11 112467799999987764211 1 1223333 478899
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 045882 338 VGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDR 417 (832)
Q Consensus 338 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~ 417 (832)
++++|+.+.||+..+++|++++.++ ++++ |+.+|.+ ++..+++ +++.+.+ ..+ .|.+++
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~g-----~~~~~~~----~~~~~~~----~~~--~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGDG-----PERSPAE----RLARELG----LQD--DVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcCC-----cCHHHHH----HHHHHcC----CCc--eEEEec-
Confidence 9999999999999999999988655 3344 7777743 3333333 3333322 111 255554
Q ss_pred CCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEe
Q 045882 418 PVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRV 494 (832)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~V 494 (832)
. .+++..+|+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+. .|+++
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-------------------~PvI~s~~~~~~e~i~~~~~G~~~ 318 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACG-------------------VPVVASNAGGIPEVVKHGETGFLV 318 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-------------------CCEEEeCCCCchhhhcCCCceEEc
Confidence 3 4579999999999999999999999999999994 4699999999988883 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHHHHHH
Q 045882 495 NPWDIDAVADALHDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 545 (832)
+|.|+++++++|.++++. ++++....++.+++ ...++....++.+++-++
T Consensus 319 ~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 319 DVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999974 44555555666666 566888888887776554
No 70
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.83 E-value=2.9e-19 Score=212.10 Aligned_cols=281 Identities=12% Similarity=0.109 Sum_probs=181.0
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEE-EecCCCC---ChhhhhcCCchHHHHHHHHhCCEEeecC-hhh-
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGF-FLHSPFP---SSEIYRTLPVRNEILKALLNADLIGFHT-FDY- 265 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~-flH~PfP---~~e~~r~lp~r~~il~~ll~~dligf~t-~~~- 265 (832)
++..+| |+|++|++.-.++..+..+.. .+++.+ .+|. +| ..+.++. ....+.+.+..++.+.+-+ ..+
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344456 999999999888777776544 455544 4564 22 1121110 0111223333444333322 122
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEecccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMD 344 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld 344 (832)
.+.+.. .++. ...+|.++|+|||...|.+ .+........++... .+.++|++|+|++
T Consensus 470 ~~~l~~----~~g~---------------~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLGV---------------DERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcCC---------------ChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 222221 1121 2346788999999888752 121111122222222 3467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 045882 345 IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEK 424 (832)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el 424 (832)
+.||+..+++||.++++++|+++ |+++|.+ +. ++++++++++.+. ...+.+.+.. .++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~G-----~~----~~~L~~l~~~lgL-------~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGGG-----PL----LESVREFAQRLGM-------GERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEccC-----cc----hHHHHHHHHHcCC-------CCcEEEcCCc--chH
Confidence 99999999999999999999876 9988843 33 2345555555432 2334455554 479
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCH--
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDI-- 499 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~-- 499 (832)
..+|+.||++|+||.+|||+++++|||+|+ .|+|+|..+|+.+.+. +|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G-------------------~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFSG-------------------VPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHcC-------------------CeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 999999999999999999999999999994 4799999999988883 4899998885
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHH
Q 045882 500 DAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQ 542 (832)
Q Consensus 500 ~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~ 542 (832)
++++++|.+++....... ...++.++++ ..++....++.+++
T Consensus 647 ~~La~aL~~ll~~l~~~~-~l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 647 PDVAEALARIHDMCAADP-GIARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHHhChhccH-HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 589999998887543322 2234556655 46777776666654
No 71
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.82 E-value=1.3e-18 Score=196.18 Aligned_cols=280 Identities=14% Similarity=0.107 Sum_probs=183.8
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH---------HHHHhCCEEeecChhhHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL---------KALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il---------~~ll~~dligf~t~~~~~~F 269 (832)
.|+|++|+..... + +++... ..++.|..| ||......--..-..+. ..+-.+|.|...+......+
T Consensus 95 ~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSACV-P-LLKLFS-PSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchHH-H-HHHHhc-CCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 4999999866432 2 233322 388999999 44332111001111111 12345777777665444433
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
... ++.. ....+.++|+|+|.+.|.+....+ ..+......++.+++++||+.+.||+
T Consensus 170 ~~~----~~~~--------------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPSL--------------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hccc--------------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 221 1100 011235789999998886432110 11111122577899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH-HhcccCCCCcccEEEecCCCCHHHHH
Q 045882 350 SLKLLAMEQLLKVH---PELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKR-INETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 350 ~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~-iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
..+++|++++.+++ |+++ |+.+|.+... .++..++.+++++++++ .+. ..-+.+.+.++.+++.
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l-------~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELLLL-------EDQVIFLPSISDSQKE 294 (392)
T ss_pred HHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhcCC-------CceEEEeCCCChHHHH
Confidence 99999999998887 6655 8888864321 12233455666666655 321 2233445689999999
Q ss_pred HHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHH
Q 045882 426 AYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAV 502 (832)
Q Consensus 426 aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~ 502 (832)
.+|+.||++++||..||||++++|||+|+ .|+|+|+.+|..+.+. .|++++| |++++
T Consensus 295 ~~l~~ad~~l~~s~~E~~g~~~lEAma~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~ 354 (392)
T cd03805 295 LLLSSARALLYTPSNEHFGIVPLEAMYAG-------------------KPVIACNSGGPLETVVDGETGFLCEP-TPEEF 354 (392)
T ss_pred HHHhhCeEEEECCCcCCCCchHHHHHHcC-------------------CCEEEECCCCcHHHhccCCceEEeCC-CHHHH
Confidence 99999999999999999999999999994 4799999999888773 3788877 99999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHH
Q 045882 503 ADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHS 539 (832)
Q Consensus 503 A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~ 539 (832)
|++|.++++.++ .++...++.++++ ..++...++++
T Consensus 355 a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 355 AEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 999999998654 4555566667766 44676666554
No 72
>PLN02949 transferase, transferring glycosyl groups
Probab=99.82 E-value=2.7e-18 Score=197.16 Aligned_cols=313 Identities=13% Similarity=0.117 Sum_probs=205.1
Q ss_pred ccccccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcc-cccHHHHHHhhcCCCeEEE
Q 045882 149 FCKQYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYH-LMVLPTFLRRRFHRVKLGF 227 (832)
Q Consensus 149 f~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyh-l~llp~~lr~~~~~~~ig~ 227 (832)
+-..-.||-||.... .=+..|.++..+.+ +. |.|||---= ..-+| ++| +...|++|
T Consensus 109 ~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 345566777776532 23567777765543 12 347774221 12223 344 34789999
Q ss_pred EecCCCCChhhhhcCCc-------------------hHHH-------HH--HHHhCCEEeecChhhHHHHHHHHHHHhCC
Q 045882 228 FLHSPFPSSEIYRTLPV-------------------RNEI-------LK--ALLNADLIGFHTFDYARHFLSCCSRMLGL 279 (832)
Q Consensus 228 flH~PfP~~e~~r~lp~-------------------r~~i-------l~--~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 279 (832)
.+|-|--+.+....+-. .+.+ +. .+-.+|.|...+....+++.+ ..+
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~~- 240 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LWR- 240 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----HcC-
Confidence 99966545433322100 0000 10 123567777665544444432 111
Q ss_pred cccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHH
Q 045882 280 DYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQL 359 (832)
Q Consensus 280 ~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~l 359 (832)
...++.++++|+|...+... +. ....+++++++|+|+.+.||+..+|+||.++
T Consensus 241 ---------------~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 241 ---------------IPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred ---------------CCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 11245678889998766321 10 0113457899999999999999999999999
Q ss_pred HHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceeccc
Q 045882 360 LKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAV 439 (832)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~ 439 (832)
+++.++-..++.|+++|... .++..++.+++++++++.+.. + .|.| .+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD----G--DVEF-HKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC----C--cEEE-eCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543211234599998642 122233445666666554321 1 2554 568999999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C------CceEeCCCCHHHHHHHHHHHhcC
Q 045882 440 RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S------GAIRVNPWDIDAVADALHDAITM 512 (832)
Q Consensus 440 ~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~------~a~~VnP~d~~~~A~ai~~aL~m 512 (832)
.||||++++|||||+ .|+|++..+|..+.+ . .|++++ |++++|++|.+++++
T Consensus 364 ~E~FGivvlEAMA~G-------------------~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 364 DEHFGISVVEYMAAG-------------------AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRM 422 (463)
T ss_pred cCCCChHHHHHHHcC-------------------CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhC
Confidence 999999999999994 469999988875433 1 267764 999999999999998
Q ss_pred CHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 513 SDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 513 ~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
+++++++..++.++.+.+++....++++++.+...
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 88888777778888888899998888888777654
No 73
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.82 E-value=3.1e-19 Score=186.12 Aligned_cols=189 Identities=18% Similarity=0.145 Sum_probs=121.9
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCC----
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKK---- 655 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~---- 655 (832)
+|++|+||||++ .+. +++++.++|++| ++.|+.++++|||++..+.+++.+++ ..++|++||+.|+.+.+
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999998 333 456799999999 67899999999999999999888776 45899999999998642
Q ss_pred ---------c--cEEEcCcccchhHHHHHHHHHHHHHhcCCceEEee---cc----eeEEEEe------ccCCCCCCchh
Q 045882 656 ---------S--EWETSTVAADFEWKRITEPVMKLYTEATDGSYIEK---KE----TALVWHY------QDAAPGFGSCQ 711 (832)
Q Consensus 656 ---------~--~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~---k~----~~l~~~~------~~ad~~~~~~~ 711 (832)
. .+...++ .+.++++++...+..+-.+... .. ..+.... +.....+...
T Consensus 76 ~~~~~~~~~~~~i~~~~l~------~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~- 148 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKP------VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLW- 148 (225)
T ss_pred cccccccCCCeEEEEcCCC------HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCC-
Confidence 1 2333222 3445555554443222111000 00 0000000 0000000000
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCC--CcceEEEEeCChhhHHHHHHccc
Q 045882 712 AKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGK--LPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 712 a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi--~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
..+....+.+.+....+.+..+..++++ ++++|||.|++.+++.+ ++ +...+++|||+.||++||+.++.
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 149 SREGWEAILVTARARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred CHHHHHHHHHHHHHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 1122222322233345666777777886 55999999999999987 65 56689999999999999999985
No 74
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.81 E-value=1.3e-18 Score=192.18 Aligned_cols=275 Identities=16% Similarity=0.139 Sum_probs=197.7
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCCh--hhhhc---CCchHHHHHHHHhCCEEeecChhhHHHH
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSS--EIYRT---LPVRNEILKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~--e~~r~---lp~r~~il~~ll~~dligf~t~~~~~~F 269 (832)
.++ |+||+|.+..... +....++.+.+|-.+|.. ..+.. ...+..+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 445 9999998887766 456789999999765432 11111 1123334456778899998887666666
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
.+.. +. ...++.++|+|+|...+.... ... ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA-----EAE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc-----hHH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 4321 11 122566799999988765321 111 1122223578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+..+.+++|+++ |+.+|... .........+ .+. + ....+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~----~---~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL----G---LGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc----C---CCCeEEECCCCChhHHHHHHh
Confidence 999999999999888655 88887432 1111222222 111 1 233555678999999999999
Q ss_pred hcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHH
Q 045882 430 LAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 430 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~ 508 (832)
.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+ .+++.++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~G-------------------~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMACG-------------------TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcCC-------------------CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 9999999999999999999999994 468999998888777 46899999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+++ .++.+....++.++++..+++..++++++
T Consensus 333 l~~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLE-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 987 45555556666778888899999988775
No 75
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.80 E-value=7.8e-18 Score=195.09 Aligned_cols=271 Identities=14% Similarity=0.066 Sum_probs=179.8
Q ss_pred CCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChh-hhhcC----CchHHHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 198 EEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE-IYRTL----PVRNEILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 198 ~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e-~~r~l----p~r~~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
+.|++.++--+.... . +.+..+.+++...+|.-.-+.. .-... +.-+..++.+-.+|.|...|....+.....
T Consensus 211 ~~di~i~dr~~~~~~-~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIGQ-A-VLENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccch-H-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 358998875554443 3 4456678999999995431110 00000 111222333445677777666444333221
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
... +.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 111 112233567889998754332 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|+.++.+++|+++ |+++|. |++. +++++++++.+.. + .|.+ .|+. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~f-~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQAQ----D--YIHL-KGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCCC----C--eEEE-cCCC---CHHHHHHhCC
Confidence 999999999999876 888873 3433 3455555543221 1 2444 4443 6788999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc-cccccC-C--CceEeCC----CC----HH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI-GCSPSL-S--GAIRVNP----WD----ID 500 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~s~~l-~--~a~~VnP----~d----~~ 500 (832)
++|+||.+||||++++|||||+ .|+|+|... |..+.+ + +|++|++ .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G-------------------~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSG-------------------LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHhC-------------------CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 9999999999999999999994 469999986 677766 2 4899974 33 89
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
++|++|.++++ +++++...++.++....++...-++.+.+-++
T Consensus 456 ~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 44566667777888888888877777776554
No 76
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.80 E-value=6.7e-18 Score=186.64 Aligned_cols=268 Identities=15% Similarity=0.141 Sum_probs=189.8
Q ss_pred HHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 193 EVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
+..++ |+|++|..+...+..++..+....+..+.+|.+-.... +....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 99999987666666666666667888888885422111 111233445667999998888776665431
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
.+ ....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 11 1233677899999988775321 1122467789999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|++++.+++|+++ |+.+|.. +... ++.+.+++.+ ..+.+.+.+.++.+++.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~----~~~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDFR----LDIVGDG-----PLRD----ELEALIAELG-------LEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCeE----EEEEECC-----ccHH----HHHHHHHHcC-------CCCeEEECCcCChHHHHHHHHhCC
Confidence 999999988777655 8888743 2222 3333333332 223455677899999999999999
Q ss_pred cceecccc------cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHH
Q 045882 433 CCIVNAVR------DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVA 503 (832)
Q Consensus 433 v~vvtS~~------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A 503 (832)
++++||.. ||||++++|||+|+ .|+|+|..+|..+.+. .|++++|.|+++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 318 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAMG-------------------LPVISTDVSGIPELVEDGETGLLVPPGDPEALA 318 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHcC-------------------CCEEecCCCCcchhhhCCCceEEeCCCCHHHHH
Confidence 99999999 99999999999994 4689999888777663 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHH
Q 045882 504 DALHDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAH 538 (832)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~ 538 (832)
++|.++++.++. +....+..++++. .++....++
T Consensus 319 ~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 319 DAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999986543 4445555566654 455554443
No 77
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.80 E-value=9.9e-18 Score=190.96 Aligned_cols=282 Identities=15% Similarity=0.123 Sum_probs=191.3
Q ss_pred CCEEEEeCcccccH-HHHHHhhcCCCeEEEEecCCCCChhhhhc-C--CchHH----HH-HHHHhCCEEeecChhhHHHH
Q 045882 199 EDYVWIHDYHLMVL-PTFLRRRFHRVKLGFFLHSPFPSSEIYRT-L--PVRNE----IL-KALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 199 ~d~vwvhDyhl~ll-p~~lr~~~~~~~ig~flH~PfP~~e~~r~-l--p~r~~----il-~~ll~~dligf~t~~~~~~F 269 (832)
.|+||+|...+... ..++-.+.-+.++.+.+|--||..-+-.. . +.... +. ..+-.+|.|...+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 39999998665432 22332333456777777755543211100 1 00011 11 12446888888887666655
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEecccccc
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIF 346 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~ 346 (832)
.+ .+. ...++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.
T Consensus 187 ~~-----~~~---------------~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KGV---------------AAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cCC---------------CcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 111 2236778999999988763211 1123455555 357899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|++++ +++|+++ |+++|. |++.+ ++++++++.+ ...|.+ .+.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~~----l~ivG~-----g~~~~----~l~~~~~~~~-------l~~v~f-~G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDLI----FVICGQ-----GGGKA----RLEKMAQCRG-------LPNVHF-LPLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCeE----EEEECC-----ChhHH----HHHHHHHHcC-------CCceEE-eCCCCHHHHHH
Confidence 9999999999876 4556554 888873 34333 3444444332 223555 56899999999
Q ss_pred HHHhcCcceecccccCCCCc----ceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccc--cccC-CCceEeCCCCH
Q 045882 427 YYALAECCIVNAVRDGMNLM----PYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGC--SPSL-SGAIRVNPWDI 499 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--s~~l-~~a~~VnP~d~ 499 (832)
+|+.||++|+||..|+++++ .+|||+|+ .|+|+|..+|. .+.+ ..|++++|.|+
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-------------------~PVi~s~~~g~~~~~~i~~~G~~~~~~d~ 360 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASG-------------------RNVVATAEPGTELGQLVEGIGVCVEPESV 360 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcC-------------------CCEEEEeCCCchHHHHHhCCcEEeCCCCH
Confidence 99999999999999996554 58999994 46899988774 3444 56999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHHHHHHHH
Q 045882 500 DAVADALHDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 500 ~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~ 547 (832)
+++|++|.++++. ++++....++.++++. .++....+++|++.+++.
T Consensus 361 ~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 361 EALVAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 9999999999875 4556666677787776 589999999998888764
No 78
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.80 E-value=1.5e-18 Score=197.38 Aligned_cols=356 Identities=12% Similarity=0.121 Sum_probs=201.1
Q ss_pred cccccccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHH-hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEec
Q 045882 152 QYLWPLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEV-INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLH 230 (832)
Q Consensus 152 ~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~-~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH 230 (832)
.-||-.|+--.+ .....+++..-=.|.. ..|-+..... .....|+++.||++.-.....||++.++++..|+.|
T Consensus 106 ~~lW~~~~i~s~---~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH 180 (590)
T cd03793 106 GELWELCGIGSP---EGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH 180 (590)
T ss_pred HHHHHHcCCCCC---CCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEec
Confidence 457888876533 2223344433333431 1122222222 111259999999999999999999889999999999
Q ss_pred CCCCChhhhhcCCch-HHHHHHHHhCCEEeecCh-------hhHHHHHHH-----HHHHhCCcccccCceeeEEEcCeEE
Q 045882 231 SPFPSSEIYRTLPVR-NEILKALLNADLIGFHTF-------DYARHFLSC-----CSRMLGLDYESKRGYIGLEYFGRTI 297 (832)
Q Consensus 231 ~PfP~~e~~r~lp~r-~~il~~ll~~dligf~t~-------~~~~~Fl~~-----~~r~l~~~~~~~~~~~~~~~~gr~~ 297 (832)
+.++-|.+-.. ..+-. ++-.|.-. -+.++.++. ++++..++...... .....+++.
T Consensus 181 ----AT~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~p 249 (590)
T cd03793 181 ----ATLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRKP 249 (590)
T ss_pred ----ccccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCCC
Confidence 44555532110 00000 00000000 012222211 11111111100000 011223333
Q ss_pred EEEEeecCCCchHHHhhcCCC----ChHHHHH-----HHHHHc---CCCEEEEE-eccccc-cCCHHHHHHHHHHHHHhC
Q 045882 298 YVKILHVGIHMGRLESALNHP----SSSIKVK-----EIREQF---KGKKVIVG-VDDMDI-FKGISLKLLAMEQLLKVH 363 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~----~~~~~~~-----~l~~~~---~~~~vil~-VdRld~-~KGi~~~l~A~~~ll~~~ 363 (832)
.+ |+|+|||+..|.+..... ...+++. .++.+| .+++++++ +||+++ .||++.+|+|+.+|-..-
T Consensus 250 d~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l 328 (590)
T cd03793 250 DV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLL 328 (590)
T ss_pred CE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHH
Confidence 33 899999999986432100 1111222 234544 36788888 799999 999999999999875521
Q ss_pred CCc-cCcEEEEEEecCCCCCh---------hHHHHHHHHHHHHHHHHhcc---------c--------------------
Q 045882 364 PEL-QGKLVLVQIVNPARSTG---------KDVQDAKLETYTITKRINET---------Y-------------------- 404 (832)
Q Consensus 364 P~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~ev~~lv~~iN~~---------~-------------------- 404 (832)
..- .++.|+..+..|+...+ .-..++++.+.++..+|+.+ .
T Consensus 329 ~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~ 408 (590)
T cd03793 329 KVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIF 408 (590)
T ss_pred HhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHH
Confidence 111 12233333444554321 22345666666666666555 1
Q ss_pred ---------------------------------C-CCCcccEEEecCCCC------HHHHHHHHHhcCcceecccccCCC
Q 045882 405 ---------------------------------G-VPGYEPVILIDRPVP------LHEKTAYYALAECCIVNAVRDGMN 444 (832)
Q Consensus 405 ---------------------------------~-~~~~~pv~~~~~~v~------~~el~aly~~ADv~vvtS~~EGmn 444 (832)
. ..+...|+|....++ ..+...+|+.||+||+||.+||||
T Consensus 409 ~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG 488 (590)
T cd03793 409 ALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWG 488 (590)
T ss_pred hhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCC
Confidence 0 012223444433222 335788999999999999999999
Q ss_pred CcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc----ccCC----CceEeC-------CCCHHHHHHHHHHH
Q 045882 445 LMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS----PSLS----GAIRVN-------PWDIDAVADALHDA 509 (832)
Q Consensus 445 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s----~~l~----~a~~Vn-------P~d~~~~A~ai~~a 509 (832)
++++||||| +.|+|+|..+|.. +.+. .|+.|. +.+++++|++|.+.
T Consensus 489 ~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~ 549 (590)
T cd03793 489 YTPAECTVM-------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEF 549 (590)
T ss_pred cHHHHHHHc-------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHH
Confidence 999999999 4579999999984 4432 378887 56678999999998
Q ss_pred hcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 045882 510 ITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (832)
++++..++........+.....++.+-+..+++.
T Consensus 550 ~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A 583 (590)
T cd03793 550 CQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKA 583 (590)
T ss_pred hCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8776544443333333555566766666655554
No 79
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.80 E-value=2e-18 Score=195.87 Aligned_cols=185 Identities=12% Similarity=0.013 Sum_probs=125.9
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccc--cccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDM--DIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRl--d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
++.++|+|||++.+..... . ...+ ...++++|++|+|. ++.||+..+++|+.++ .+ ++.|+++
T Consensus 213 ~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~iv 277 (405)
T PRK10125 213 RCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTF 277 (405)
T ss_pred CEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEE
Confidence 6778999999754321100 0 0001 12467889999994 4789999999999875 23 3558888
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 376 VNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 376 ~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
|... ... . ..|.+++...+..++..+|+.||+||+||..||||++++|||||+
T Consensus 278 G~g~-----~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G- 330 (405)
T PRK10125 278 GKFS-----PFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG- 330 (405)
T ss_pred cCCC-----ccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC-
Confidence 8432 100 0 124444433467899999999999999999999999999999994
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh-hhcCC
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRY-ICSHD 532 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~ 532 (832)
.|||+|+.+|+.+.+. +|++|+|.|++++|+++...+.. .+.....++.++. ...++
T Consensus 331 ------------------~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~--~~~~~~~~~~r~~~~~~fs 390 (405)
T PRK10125 331 ------------------VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQ--AVFGTTLAEFSQRSRAAYS 390 (405)
T ss_pred ------------------CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHH--HhhhhHHHHHHHHHHHhCC
Confidence 5799999999888773 59999999999999865432210 0000011233444 45588
Q ss_pred HHHHHHHHHHHH
Q 045882 533 VAYWAHSFMQDL 544 (832)
Q Consensus 533 ~~~W~~~~l~~l 544 (832)
....++++++-.
T Consensus 391 ~~~~~~~y~~lY 402 (405)
T PRK10125 391 GQQMLEEYVNFY 402 (405)
T ss_pred HHHHHHHHHHHH
Confidence 888888776644
No 80
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.80 E-value=9e-18 Score=183.55 Aligned_cols=286 Identities=18% Similarity=0.135 Sum_probs=200.3
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhh----cCCchHHHHHHHHhCCEEeecChhhH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR----TLPVRNEILKALLNADLIGFHTFDYA 266 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r----~lp~r~~il~~ll~~dligf~t~~~~ 266 (832)
+.+..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444455 999999999888776 4455678999999998887543211 00111222334566788888887666
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccccc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIF 346 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~ 346 (832)
+.+.+.. .....++.++|+|+|...+.... ...........+++.++++||+++.
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 6554310 01113677899999988764211 1111111112467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|+..+.+++|+++ |+.+|. ++....+++. +.+.+ ..+-+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~~~~----~~~~~-------~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREELEAL----AAELG-------LGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHHHHH----HHHhC-------CCcceEEEeccChhhHHH
Confidence 999999999999988887655 888872 2333333333 32222 122344566899999999
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVA 503 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A 503 (832)
+|+.||++++|+..||++++++|||+|+ .|+|++..+|..+.+. .|+++++.|+++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~g-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAAG-------------------LPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHcC-------------------CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 9999999999999999999999999994 4799999999888884 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHH-hhhhcCCHHHHHHHHHHHH
Q 045882 504 DALHDAITMSDVEKQLRHEKHY-RYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~-~~v~~~~~~~W~~~~l~~l 544 (832)
++|.++++.++. ++...++.+ .....++...+++.+++-+
T Consensus 333 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 333 EAILRLLDDPEL-RRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHcChHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999999986543 334444444 5567788888888777643
No 81
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.79 E-value=5.7e-18 Score=187.21 Aligned_cols=283 Identities=17% Similarity=0.169 Sum_probs=191.1
Q ss_pred HHHhCCCCCEEEEeCcccc----cHHHHHH-hhcCCCeEEEEecCCCCChhhhhcCCchHHH-HHHHHhCCEEeecChhh
Q 045882 192 MEVINPEEDYVWIHDYHLM----VLPTFLR-RRFHRVKLGFFLHSPFPSSEIYRTLPVRNEI-LKALLNADLIGFHTFDY 265 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~----llp~~lr-~~~~~~~ig~flH~PfP~~e~~r~lp~r~~i-l~~ll~~dligf~t~~~ 265 (832)
+...+| |+|++|..+-. ......+ .+..+.++.+.+|.+.|....+ ....+ -.-+-.+|.|-+.+.+.
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~----~~~~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRP----GDRALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccch----hhhHHHHHHHhcCCEEEEeeHHH
Confidence 344455 89999873321 1111111 1236789999999862221111 11122 22345689998886455
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccc
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDI 345 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~ 345 (832)
++.++... . ..++.++|+|++...+.... . .+. .....++.+|+++||+.+
T Consensus 146 ~~~~~~~~--------------------~-~~~~~~i~~~~~~~~~~~~~------~-~~~-~~~~~~~~~i~~~G~~~~ 196 (366)
T cd03822 146 LRALLLRA--------------------Y-PEKIAVIPHGVPDPPAEPPE------S-LKA-LGGLDGRPVLLTFGLLRP 196 (366)
T ss_pred HHHHHhhc--------------------C-CCcEEEeCCCCcCcccCCch------h-hHh-hcCCCCCeEEEEEeeccC
Confidence 55554210 0 23667799999987654211 1 111 112256789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 045882 346 FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKT 425 (832)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~ 425 (832)
.||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+.+. . ..|.++++.++.+++.
T Consensus 197 ~K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~~~----~--~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 197 YKGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERLGL----A--DRVIFINRYLPDEELP 262 (366)
T ss_pred CCCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhcCC----C--CcEEEecCcCCHHHHH
Confidence 9999999999999999888766 88887432 1111111111122333221 1 1366666569999999
Q ss_pred HHHHhcCcceeccccc--CCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---CCceEeCCCCHH
Q 045882 426 AYYALAECCIVNAVRD--GMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL---SGAIRVNPWDID 500 (832)
Q Consensus 426 aly~~ADv~vvtS~~E--GmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l---~~a~~VnP~d~~ 500 (832)
.+|+.||++++||..| |++++++|||+|+ .|+|+|..+| .+.+ ..|++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G-------------------~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFG-------------------KPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcC-------------------CCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 9999999999994 4699999888 6666 358999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 501 AVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
+++++|.++++.+ +.+....++.++++.++++..+++.+.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999854 445556677788888899999999887644
No 82
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.79 E-value=1.9e-18 Score=181.44 Aligned_cols=187 Identities=12% Similarity=0.087 Sum_probs=130.9
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC-CceEEEeCCEEEEeCCCcc
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE-NLGIAAEHGYYLRWTKKSE 657 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~-~l~liaenGa~i~~~~~~~ 657 (832)
.|+||+|+||||++ .+...++.+.++|++| +++|+.|+++|||+...+..+++.+. ..++|++||+.|+.+..-.
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~ 76 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYF 76 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccc
Confidence 48999999999999 5667788899999999 68899999999999999999998876 3589999999999774311
Q ss_pred ---------------EEEcCcccchhHHHHHHHHHHHHHhcCCceEEe------------------------ecceeEEE
Q 045882 658 ---------------WETSTVAADFEWKRITEPVMKLYTEATDGSYIE------------------------KKETALVW 698 (832)
Q Consensus 658 ---------------w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie------------------------~k~~~l~~ 698 (832)
|...+-. . ...++.+++...+.....+.- .++++-.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~lg~---~-y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~ 152 (302)
T PRK12702 77 PAGILDEQWQHRPPYYVCALGL---P-YPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIF 152 (302)
T ss_pred cccccccccccCCCceEEecCC---C-HHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcce
Confidence 1111101 1 233444444443322211111 12233333
Q ss_pred EeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHhh
Q 045882 699 HYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKP------------------Q---GVTKGLVAEKVLSTM 757 (832)
Q Consensus 699 ~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p------------------~---gvnKG~al~~Ll~~l 757 (832)
.+... ...+ .+.+...++.+..|..++.+.. . +.+||.|++.|.+.+
T Consensus 153 ~w~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y 220 (302)
T PRK12702 153 SYSGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCY 220 (302)
T ss_pred EecCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHH
Confidence 33211 1122 4455567788889998888886 5 899999999999988
Q ss_pred hhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 758 ISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 758 ~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
.... ..-.++++|||.||++||++++..
T Consensus 221 ~~~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 221 QRHL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred Hhcc-CCceEEEecCChhhHHHHHhCCee
Confidence 4433 334899999999999999999864
No 83
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.79 E-value=8e-18 Score=185.48 Aligned_cols=274 Identities=16% Similarity=0.182 Sum_probs=180.9
Q ss_pred CCEEEEeCcc-cccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHH------HHHHHhCCEEeecChhhHHHHHH
Q 045882 199 EDYVWIHDYH-LMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEI------LKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 199 ~d~vwvhDyh-l~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~i------l~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.|+|++|+.. ....+.....+..+.++.+..|..++....... +.+..+ -..+-.+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 3999999843 322322222233468888999976654321000 111111 11233456666655333322211
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCC
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKG 348 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KG 348 (832)
.+...++.++|+|+|.+.+.... ... . ++.+ .++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~--~---~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALP---SRG--R---RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcch---hhh--h---hhhccCCCCCcEEEEEeCcchhcC
Confidence 11233577899999998775321 111 1 2323 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 045882 349 ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYY 428 (832)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly 428 (832)
+..+++|+.++.+++|+++ |+.+|... . .+ ...+..++.+. + ..+.+.+.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~---~-~~---~~~~~~~~~~~----~---~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE---G-GY---RAELKQIAAAL----G---LEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC---c-ch---HHHHHHHHHhc----C---ccceEEEcCCCChHHHHHHH
Confidence 9999999999999888776 88887432 1 11 12222222322 2 22344557799999999999
Q ss_pred HhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--CceEeCCCCHHHHHHHH
Q 045882 429 ALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS--GAIRVNPWDIDAVADAL 506 (832)
Q Consensus 429 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~--~a~~VnP~d~~~~A~ai 506 (832)
+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+. .++++ |.+.++++++|
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 339 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACG-------------------TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAAL 339 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcC-------------------CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHH
Confidence 99999999999999999999999994 4799999999888873 35555 55669999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHH
Q 045882 507 HDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFM 541 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 541 (832)
.++++++ +++....++.+++ ...++....++.++
T Consensus 340 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 340 RRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999976 5556666666776 56677776666554
No 84
>PHA01633 putative glycosyl transferase group 1
Probab=99.78 E-value=1.9e-18 Score=188.81 Aligned_cols=194 Identities=17% Similarity=0.187 Sum_probs=142.5
Q ss_pred eecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCC
Q 045882 302 LHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARS 381 (832)
Q Consensus 302 ~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (832)
+|.|||++.|.+... ...+.++++...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999998864210 11112222222235678999999999999999999999999999999876777776651
Q ss_pred ChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEec--CCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCC
Q 045882 382 TGKDVQDAKLETYTITKRINETYGVPGYEPVILID--RPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPK 459 (832)
Q Consensus 382 ~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~ 459 (832)
. ++. +. +..+ .|.+++ +.++.+++.++|+.||+||+||..||||++++|||||+
T Consensus 192 --~-------~~~----~l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----- 247 (335)
T PHA01633 192 --K-------QFT----QL----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----- 247 (335)
T ss_pred --H-------HHH----Hc----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-----
Confidence 1 111 11 1111 266654 67789999999999999999999999999999999994
Q ss_pred chhhhhhhcCCCCCceEEeccCccccccCCC---------------------ceEeCCCCHHHHHHHHHHHhcCCHHHHH
Q 045882 460 MDEAMELASVCPRTSMLVISEFIGCSPSLSG---------------------AIRVNPWDIDAVADALHDAITMSDVEKQ 518 (832)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~---------------------a~~VnP~d~~~~A~ai~~aL~m~~~e~~ 518 (832)
.|+|+|..+|..+..++ |+.++++|++++|++|.+++.+.+.+
T Consensus 248 --------------~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~-- 311 (335)
T PHA01633 248 --------------TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE-- 311 (335)
T ss_pred --------------CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--
Confidence 46999988877665321 45788899999999999998876433
Q ss_pred HHHHHHHhhhhcCCHHHHHHHHH
Q 045882 519 LRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 519 ~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+|..+.++..+++++..-+++|+
T Consensus 312 ~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhHHHHHHHHhcCHHHHHHHhh
Confidence 33445567788888877777664
No 85
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.78 E-value=1.8e-17 Score=181.95 Aligned_cols=282 Identities=16% Similarity=0.158 Sum_probs=189.2
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHH-HHhCCEEeecChhhHHHHH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKA-LLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~-ll~~dligf~t~~~~~~Fl 270 (832)
++..+| |+|++|++|......++.......++.+..|.-++...-+ ..+....+..- .-.+|.+...+......+.
T Consensus 76 ~~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 76 IRRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HHhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 344466 8999999998877777766656788999999765542100 00111111111 1235665444443333332
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccC
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFK 347 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~K 347 (832)
.. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.|
T Consensus 153 ~~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 AI-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred Hc-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 10 11 1225667899999887753221 112233344 4678999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 045882 348 GISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAY 427 (832)
Q Consensus 348 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~al 427 (832)
|+..+++|+..+.+++|+++ |+.+|.+. +....+.... .+ .+... .|.++ +. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~----~~~~~--~v~~~-g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE----LGLED--KVILL-GE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh----cCCCc--eEEEc-cc--cccHHHH
Confidence 99999999999998888765 88887432 2222222211 11 12111 24443 33 5689999
Q ss_pred HHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-CceEeCCCCHHHHHHHH
Q 045882 428 YALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-GAIRVNPWDIDAVADAL 506 (832)
Q Consensus 428 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~a~~VnP~d~~~~A~ai 506 (832)
|+.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g-------------------~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i 326 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACG-------------------LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAI 326 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcC-------------------CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHH
Confidence 999999999999999999999999994 4699999999888885 58999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHHHH
Q 045882 507 HDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFMQD 543 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~ 543 (832)
.++++.+ +++....++.++++. .++....++.+.+-
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 327 EALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999976 455555666677765 47877777777653
No 86
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.78 E-value=1.7e-17 Score=183.71 Aligned_cols=274 Identities=16% Similarity=0.191 Sum_probs=193.3
Q ss_pred CEEEEeC-cccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcC-Cc-------hHHH-HHHHHhCCEEeecChhhHHHH
Q 045882 200 DYVWIHD-YHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTL-PV-------RNEI-LKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 200 d~vwvhD-yhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~l-p~-------r~~i-l~~ll~~dligf~t~~~~~~F 269 (832)
|+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+ -..+..+|.+-+.+...++.+
T Consensus 101 D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~ 180 (394)
T cd03794 101 DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYL 180 (394)
T ss_pred CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 8999998 445556665555556889999999888754322111 11 1111 123566899999998777766
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
.. .+ ....++.++|+|++...+..... ...... .....++.+++++||+.+.||+
T Consensus 181 ~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 181 VR-----RG---------------VPPEKISVIPNGVDLELFKPPPA----DESLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred Hh-----cC---------------CCcCceEEcCCCCCHHHcCCccc----hhhhhh-ccCCCCcEEEEEecCcccccCH
Confidence 41 11 11235678999999887753221 111111 1122578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+.++.+. |+++ |+.+|. +++...+++.+ ... +...|.+++ .++.+++.++|+
T Consensus 236 ~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~----~~~-------~~~~v~~~g-~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELA----KAL-------GLDNVTFLG-RVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHH----HHc-------CCCcEEEeC-CCChHHHHHHHH
Confidence 9999999999776 6554 887773 33333333321 111 223466655 899999999999
Q ss_pred hcCcceecccccCC-----CCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHH
Q 045882 430 LAECCIVNAVRDGM-----NLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDA 501 (832)
Q Consensus 430 ~ADv~vvtS~~EGm-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~ 501 (832)
.||++++||..|++ +++.+|||+|+ .|+|+|..+|..+.+. .|+++++.|+++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G-------------------~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~ 354 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG-------------------KPVLASVDGESAELVEEAGAGLVVPPGDPEA 354 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC-------------------CcEEEecCCCchhhhccCCcceEeCCCCHHH
Confidence 99999999999876 55579999994 5799999999998883 489999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHH
Q 045882 502 VADALHDAITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSF 540 (832)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~ 540 (832)
++++|.++++ .++++....++.++++. .++...+++.+
T Consensus 355 l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 355 LAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 9999999995 45566666677777776 78888888765
No 87
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.78 E-value=1.4e-17 Score=183.64 Aligned_cols=276 Identities=16% Similarity=0.106 Sum_probs=190.3
Q ss_pred HHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCch----HHHHH-HHHhCCEEeecChhhHH
Q 045882 193 EVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVR----NEILK-ALLNADLIGFHTFDYAR 267 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r----~~il~-~ll~~dligf~t~~~~~ 267 (832)
+..+| |+|++|..-...+......+..++++.+++|..||..-........ ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55567 8999996654333333323344688999999887743211111111 11222 23467888887776655
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccC
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFK 347 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~K 347 (832)
.+.. .+ ...+.++|+|+|...|.+... .......+. ..++++++++||+.+.|
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~--~~~~~~i~~~G~~~~~k 210 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRR---DEALRARLG--PPDRPVLLYVGRLAPEK 210 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCcccc---cHHHHHHhC--CCCCeEEEEEecccccc
Confidence 2211 00 124667899999987753221 111111111 24678999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 045882 348 GISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAY 427 (832)
Q Consensus 348 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~al 427 (832)
|+..+++|+.++.++ |+++ |+.+|. +++...++ + ....|.+ .+.++.+++..+
T Consensus 211 ~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------------~--~~~~v~~-~g~~~~~~~~~~ 263 (364)
T cd03814 211 NLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------------A--RYPNVHF-LGFLDGEELAAA 263 (364)
T ss_pred CHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------------c--cCCcEEE-EeccCHHHHHHH
Confidence 999999999999877 7665 888873 22322222 0 0123544 456899999999
Q ss_pred HHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHH
Q 045882 428 YALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (832)
Q Consensus 428 y~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ 504 (832)
|+.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|.+++++
T Consensus 264 ~~~~d~~l~~s~~e~~~~~~lEa~a~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~ 324 (364)
T cd03814 264 YASADVFVFPSRTETFGLVVLEAMASG-------------------LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAA 324 (364)
T ss_pred HHhCCEEEECcccccCCcHHHHHHHcC-------------------CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHH
Confidence 999999999999999999999999994 4799999999888884 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 505 ALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
+|.++++. ++++....+..++++..+++..+++.+++.+
T Consensus 325 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 325 ALAALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999975 4555566667777788889888888877643
No 88
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.78 E-value=1.4e-17 Score=183.64 Aligned_cols=270 Identities=17% Similarity=0.192 Sum_probs=184.9
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCC---chH-----HHHHHHHhCCEEeecC
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLP---VRN-----EILKALLNADLIGFHT 262 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp---~r~-----~il~~ll~~dligf~t 262 (832)
+.+..+| |+|++|+............+..++++.+.+|.+|+...-+...+ ... -....+-.+|.+...+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455566 89999987655444443334457889999998876321111111 111 1112345688888777
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEE
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVG 339 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~ 339 (832)
......+.. .+ ....+.++|+|+|...+.... ... .++.+ .+++.|++
T Consensus 157 ~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEEEE
Confidence 754444321 01 112477899999988775321 111 12222 46788999
Q ss_pred eccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 045882 340 VDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419 (832)
Q Consensus 340 VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v 419 (832)
+||+.+.||+..+++|+..+.++.|+++ |+.+|.+ +.. .++.+++.+.+. .+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGDG-----PER----EELEELARELGL-------ADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeCC-----chH----HHHHHHHHHcCC-------CCcEEEeccC
Confidence 9999999999999999999988877655 8888732 222 233344433321 2234556789
Q ss_pred CHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCC
Q 045882 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNP 496 (832)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP 496 (832)
+.+++..+|+.||+++.||..||+|++.+|||+|+ .|+|+|..+|..+.+. +|+++++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~~ 328 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAAG-------------------LPVVAVDAPGLPDLVADGENGFLFPP 328 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHcC-------------------CcEEEeCCCChhhheecCceeEEeCC
Confidence 99999999999999999999999999999999994 4699999988888773 4899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCC
Q 045882 497 WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHD 532 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (832)
.|. +++++|.+++++++.. +...++.++++..+.
T Consensus 329 ~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 329 GDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 888 9999999999876543 555666677776655
No 89
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.78 E-value=9.8e-18 Score=187.89 Aligned_cols=280 Identities=15% Similarity=0.081 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCC---hhhhhcC-CchHHHHHHHHhC
Q 045882 180 YVSANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPS---SEIYRTL-PVRNEILKALLNA 255 (832)
Q Consensus 180 Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~---~e~~r~l-p~r~~il~~ll~~ 255 (832)
..+.-+.|-+++.. .. ..|++.+|-.+.... .+.......+...++|...-. ......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555543 22 349999987776665 233333456677778854211 1000000 1123455556678
Q ss_pred CEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCE
Q 045882 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKK 335 (832)
Q Consensus 256 dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 335 (832)
|.|.+.+..-.+.+... ++. ...+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~----~~~----------------~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQ----FGN----------------YNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHH----hCC----------------CCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 98888887666655432 110 11267899999987765210 0113566
Q ss_pred EEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEe
Q 045882 336 VIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILI 415 (832)
Q Consensus 336 vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~ 415 (832)
.++++||+.+.||+..+++|+.++.+++|+++ |+.+|.+ ++...++. ++.+. +. ...+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~----~~~~~----~~---~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKE----LIEEL----GL---EDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHH----HHHHc----CC---cceEEE
Confidence 89999999999999999999999999999877 8888843 22223333 32222 21 223344
Q ss_pred cCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc-cccccCC---Cc
Q 045882 416 DRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI-GCSPSLS---GA 491 (832)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~s~~l~---~a 491 (832)
.+ ..+++.++|+.||++|+||..||||++.+|||+|+ .|+|+|+.. |..+.+. +|
T Consensus 266 ~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G-------------------~PvI~~~~~~g~~~~v~~~~~G 324 (372)
T cd04949 266 KG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHG-------------------LPVISYDVNYGPSEIIEDGENG 324 (372)
T ss_pred cC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhCC-------------------CCEEEecCCCCcHHHcccCCCc
Confidence 44 35689999999999999999999999999999994 468999877 6777662 48
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 492 IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 492 ~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
++++|.|++++|++|..+++.+ +.+....++.++...+++...+++
T Consensus 325 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 325 YLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred eEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 9999999999999999999865 445555566666666666655554
No 90
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.78 E-value=3.1e-17 Score=186.68 Aligned_cols=271 Identities=12% Similarity=0.093 Sum_probs=187.7
Q ss_pred CCCCCEEEEeCcccccHH-HHHHhhcCCCeEEEEecCCCCChhhhhcC-C-chHHHHH-HHHhCCEEeecChhhHHHHHH
Q 045882 196 NPEEDYVWIHDYHLMVLP-TFLRRRFHRVKLGFFLHSPFPSSEIYRTL-P-VRNEILK-ALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 196 ~~~~d~vwvhDyhl~llp-~~lr~~~~~~~ig~flH~PfP~~e~~r~l-p-~r~~il~-~ll~~dligf~t~~~~~~Fl~ 271 (832)
+++.|+++.|-+|..... .+++++....++....|-. +++... + ....+.+ .+-.+|.|.+.+....+.+..
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~----d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~ 200 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGY----DLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK 200 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccc----hhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 344577777765544433 4566776666788888942 222111 1 1111222 245789998888766654432
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHH
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISL 351 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~ 351 (832)
. .+ ....++.++|+|++...+... + ...++..|+++||+.+.||+..
T Consensus 201 ~----~~---------------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~ 247 (407)
T cd04946 201 R----YP---------------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDL 247 (407)
T ss_pred H----CC---------------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHH
Confidence 1 11 112356788999998765321 0 1145678999999999999999
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh-
Q 045882 352 KLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL- 430 (832)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~- 430 (832)
+++|+.++.+++|+.. +.++.+|. |++.+++ ++++++. +. .+.+.+.|.++.+++.++|+.
T Consensus 248 li~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l----~~~~~~~----~~---~~~V~f~G~v~~~e~~~~~~~~ 309 (407)
T cd04946 248 IIKALAALAKARPSIK--IKWTHIGG-----GPLEDTL----KELAESK----PE---NISVNFTGELSNSEVYKLYKEN 309 (407)
T ss_pred HHHHHHHHHHhCCCce--EEEEEEeC-----chHHHHH----HHHHHhc----CC---CceEEEecCCChHHHHHHHhhc
Confidence 9999999999988763 56676763 3443333 3333321 11 123445779999999999986
Q ss_pred -cCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCC---ceEeCC-CCHHHHHHH
Q 045882 431 -AECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSG---AIRVNP-WDIDAVADA 505 (832)
Q Consensus 431 -ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~---a~~VnP-~d~~~~A~a 505 (832)
||+++.||..|||+++++|||+|+ .|+|+|..+|..+.+.+ |++++| .|++++|++
T Consensus 310 ~~~v~v~~S~~Eg~p~~llEAma~G-------------------~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~ 370 (407)
T cd04946 310 PVDVFVNLSESEGLPVSIMEAMSFG-------------------IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSS 370 (407)
T ss_pred CCCEEEeCCccccccHHHHHHHHcC-------------------CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHH
Confidence 688999999999999999999994 47999999999988843 688876 489999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHH
Q 045882 506 LHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFM 541 (832)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l 541 (832)
|.++++ +++++....++.++++ ..++...+.++|+
T Consensus 371 I~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 371 LSKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999998 4566666667777776 4578888877765
No 91
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.78 E-value=1.6e-17 Score=182.48 Aligned_cols=282 Identities=21% Similarity=0.221 Sum_probs=194.7
Q ss_pred HhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHHH
Q 045882 194 VINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSCC 273 (832)
Q Consensus 194 ~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~~ 273 (832)
..++ |+|++|......+......+..+.++.+..|.+++....... ..+......+-.+|.+.+.+......+.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4444 899999655444444443444457899999977654322111 1233333456678999998877766664311
Q ss_pred HHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHH
Q 045882 274 SRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKL 353 (832)
Q Consensus 274 ~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l 353 (832)
....++.++|+|+|...+.... ......+ ....+++.++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPAD-----RAEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcc-----hHHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 1123567899999988775321 1111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCc
Q 045882 354 LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAEC 433 (832)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv 433 (832)
+|++.+.+++|+++ |+.+|.+ ++...+++ ++++. +..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~~-----~~~~~~~~----~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGDG-----PLREALEA----LAAEL-------GLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcCC-----cchHHHHH----HHHhc-------CCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988877655 8777632 33333333 33222 22344556778999999999999999
Q ss_pred ceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHh
Q 045882 434 CIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAI 510 (832)
Q Consensus 434 ~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL 510 (832)
++.||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~G-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMACG-------------------LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhcC-------------------CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 999999999999999999994 4799999998888773 358999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 511 TMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
+.+.. +...+........++...+++.+.+.++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 87655 2223333444556777777777776554
No 92
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.77 E-value=1.9e-18 Score=182.61 Aligned_cols=193 Identities=20% Similarity=0.286 Sum_probs=122.5
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeCCEEEEeCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaenGa~i~~~~~ 655 (832)
+++|++|+||||++ .+..-..+..+.++ ....+++.++++|||+...+.+.+...+ ...+|+++|+.|+....
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~ 77 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGEN 77 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESST
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCC
Confidence 68999999999993 12222234444444 2247899999999999999999887642 46799999999998431
Q ss_pred ----ccEEEcCcccchhHH-HHHHHHHHHHHhcCCceEE----eecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 656 ----SEWETSTVAADFEWK-RITEPVMKLYTEATDGSYI----EKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 656 ----~~w~~~~~~~~~~w~-~~v~~i~~~~~e~~~gs~i----e~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
..|...+ +..|. +.+++++.. .++... +...+.+.+.+...+ .....+.|+..+...
T Consensus 78 ~~~d~~w~~~i---~~~w~~~~v~~~l~~----~~~l~~q~~~~q~~~k~sy~~~~~~-------~~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 78 WQPDEEWQAHI---DERWDRERVEEILAE----LPGLRPQPESEQRPFKISYYVDPDD-------SADILEEIRARLRQR 143 (247)
T ss_dssp TEE-HHHHHHH---HTT--HHHHHHHHHC----HCCEEEGGCCCGCCTCECEEEETTS-------HCHHHHHHHHHHHCC
T ss_pred CcChHHHHHHH---HhcCChHHHHHHHHH----hhCcccCCccccCCeeEEEEEeccc-------chhHHHHHHHHHHHc
Confidence 1232221 11333 233334333 333222 222334455544321 123445566555544
Q ss_pred C--EE-EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe
Q 045882 727 P--VV-VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV 803 (832)
Q Consensus 727 ~--~~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v 803 (832)
+ +. +.++...++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 4 33 3467889999999999999999999999 999999999999999999995544 47888
Q ss_pred CCc
Q 045882 804 GQK 806 (832)
Q Consensus 804 G~~ 806 (832)
|++
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 875
No 93
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.77 E-value=4.2e-18 Score=195.33 Aligned_cols=314 Identities=11% Similarity=0.095 Sum_probs=181.9
Q ss_pred EecCHHHHHHHhhhccccccc--cccccCCCCCCCCccccchHhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcccccH
Q 045882 135 TFLSSDLQKKFYHGFCKQYLW--PLFHYMLPICPDYGFRFDRLLWRAYVSANKVFADKIMEVINPEEDYVWIHDYHLMVL 212 (832)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lw--p~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyhl~ll 212 (832)
+|=++++++.|......+-.= |.|-. .++| ++|....-.-+- +-... +.+...+| |+|++|..-.+..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i--~fYp---g~~~~~~~SI~p-~gdI~--~~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKI--SFYP---GKFSKERRSIIP-AGDTS--QFIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceE--Eeec---chhccCCccccc-hHHHH--HHhhccCC--CEEEECCchhhcc
Confidence 677788888887766533111 11211 1223 344332221111 11111 11233445 8999997644433
Q ss_pred H---HHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHH--HHHHhCCcccccCce
Q 045882 213 P---TFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC--CSRMLGLDYESKRGY 287 (832)
Q Consensus 213 p---~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~--~~r~l~~~~~~~~~~ 287 (832)
. ....+++. ++...+|+.||.+--+..+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 3 33444443 688899999985322222222122111 122333332 5556554422211
Q ss_pred eeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcC---CCEEEEEeccccccCCHHHHHHHHHHHHHhCC
Q 045882 288 IGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFK---GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHP 364 (832)
Q Consensus 288 ~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P 364 (832)
+ . +. .|.. .+|||++.|.+... . . .. .++. ..+.+++||||.+.||+..+|+|+..+.++.|
T Consensus 512 --L--~-~~-vI~n-VnGVDte~F~P~~r---~-~---~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~p 576 (794)
T PLN02501 512 --L--P-KS-VICN-VHGVNPKFLKIGEK---V-A---EE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELD 576 (794)
T ss_pred --h--c-cc-ceee-cccccccccCCcch---h-H---HH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCC
Confidence 1 1 11 1111 15999998875321 1 1 11 1221 22458999999999999999999999988888
Q ss_pred CccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCC
Q 045882 365 ELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMN 444 (832)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmn 444 (832)
+++ |+++| +|++.+++++ ++.+.+. .|.|+++ .++..++|+.+||||+||.+||||
T Consensus 577 nvr----LvIVG-----DGP~reeLe~----la~eLgL--------~V~FLG~---~dd~~~lyasaDVFVlPS~sEgFG 632 (794)
T PLN02501 577 GFN----LDVFG-----NGEDAHEVQR----AAKRLDL--------NLNFLKG---RDHADDSLHGYKVFINPSISDVLC 632 (794)
T ss_pred CeE----EEEEc-----CCccHHHHHH----HHHHcCC--------EEEecCC---CCCHHHHHHhCCEEEECCCcccch
Confidence 765 88887 4555444444 4443321 2555543 344558999999999999999999
Q ss_pred CcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 045882 445 LMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPWDIDAVADALHDAITMSDVEKQLRH 521 (832)
Q Consensus 445 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~ 521 (832)
+|++|||||+ .|||+++..|... + . ++++ +.|.++++++|.++|+.++. + ...
T Consensus 633 lVlLEAMA~G-------------------lPVVATd~pG~e~-V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~ 688 (794)
T PLN02501 633 TATAEALAMG-------------------KFVVCADHPSNEF-FRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTP 688 (794)
T ss_pred HHHHHHHHcC-------------------CCEEEecCCCCce-EeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHH
Confidence 9999999994 4699999887543 4 2 3443 47999999999999987652 2 222
Q ss_pred HHHHhhhhcCCHHHHHHHHHH
Q 045882 522 EKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 522 ~~~~~~v~~~~~~~W~~~~l~ 542 (832)
+. ...+++..-++++++
T Consensus 689 ~a----~~~~SWeAaadrLle 705 (794)
T PLN02501 689 EQ----RYNLSWEAATQRFME 705 (794)
T ss_pred HH----HhhCCHHHHHHHHHH
Confidence 21 225555555555544
No 94
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.76 E-value=3.5e-17 Score=178.13 Aligned_cols=264 Identities=14% Similarity=0.079 Sum_probs=178.0
Q ss_pred HHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHHH
Q 045882 193 EVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 193 ~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
+..+| |+|++|+.+...+...+... ..++.+..|..++...... .+.......+-.+|.+.+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33455 99999998822222222221 1478888887665432111 0111123345567888777765441110
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK 352 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~ 352 (832)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 0112356778999998765421 12467899999999999999999
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcC
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAE 432 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~AD 432 (832)
++|++++.+.+|+++ |+.+|.. ++...++ +++.+.+ ..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~-------~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGDG-----PEREALE----ALIKELG-------LEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeCC-----CCHHHHH----HHHHHcC-------CCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888765 8877742 2322233 3333332 2233444444 789999999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C---CceEeCCCCHHHHHHHHHH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S---GAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~---~a~~VnP~d~~~~A~ai~~ 508 (832)
++++||..||||++++|||+|+ .|+|+|+..|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAFG-------------------LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHcC-------------------CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 9999999999999999999994 468999876655444 2 5899999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYICSHDVAYWAHSFM 541 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l 541 (832)
+++.+ +.++...++.++.+..++....+++|.
T Consensus 316 ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99844 444444555577788888888777664
No 95
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.76 E-value=2.2e-17 Score=187.31 Aligned_cols=268 Identities=11% Similarity=0.074 Sum_probs=164.1
Q ss_pred HHHHhCCCCCEEEEeCcccccH---HHHHHhhcCCCeEEEEecCCCCChhhhhcCC--chHHHHHHHHhCCEEeecChhh
Q 045882 191 IMEVINPEEDYVWIHDYHLMVL---PTFLRRRFHRVKLGFFLHSPFPSSEIYRTLP--VRNEILKALLNADLIGFHTFDY 265 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~ll---p~~lr~~~~~~~ig~flH~PfP~~e~~r~lp--~r~~il~~ll~~dligf~t~~~ 265 (832)
+++..+| |+|++|+.-.+.. ...+++++ .. +..++|+.|+. +++... .....+...+. .+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~~---------~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYIN---------SW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHHH---------HH
Confidence 3445567 8999998766665 34455555 34 77799998853 222111 11122221111 12
Q ss_pred HHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CC--CEEEEEec
Q 045882 266 ARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KG--KKVIVGVD 341 (832)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~vil~Vd 341 (832)
++.| .|+.++..+....+ +... +...+.|||.+.|.+... . +++.+ .+ .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~~~------l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAATQD------YPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHHHH------HhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEe
Confidence 2212 13333333221100 0001 112357999998864321 1 11222 12 35799999
Q ss_pred cccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCH
Q 045882 342 DMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPL 421 (832)
Q Consensus 342 Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~ 421 (832)
||.+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+. +.+ .. ++++.+..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~----~l~-------l~-~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAE----KLE-------LD-VRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHH----hcC-------Cc-EEEECCCCCH
Confidence 99999999999999999988888765 88887 5666655555444 332 11 3345664443
Q ss_pred HHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCCC
Q 045882 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPWD 498 (832)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~d 498 (832)
+ ++|+.+||||+||.+||||+|.+|||||+ .|+|+++..| .+.+ + +|+.+ .|
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G-------------------~PVVa~~~~~-~~~v~~~~ng~~~--~~ 349 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAMG-------------------KIVVCANHPS-NEFFKQFPNCRTY--DD 349 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHcC-------------------CcEEEecCCC-cceeecCCceEec--CC
Confidence 3 69999999999999999999999999994 4688888776 4556 2 35666 48
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 499 IDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 499 ~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
.++++++|.++|+.++++... +.+ ..+++..-+++|++.+.
T Consensus 350 ~~~~a~ai~~~l~~~~~~~~~---~a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 350 GKGFVRATLKALAEEPAPLTD---AQR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHHccCchhHHH---HHH---HhCCHHHHHHHHHHHhc
Confidence 999999999999854432211 111 35666666666665443
No 96
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.76 E-value=7.4e-17 Score=177.40 Aligned_cols=262 Identities=16% Similarity=0.197 Sum_probs=177.3
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~F 269 (832)
++++..+| |+|++|.+..+.++.+...+...+++.+.+|-.++.. +....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHH
Confidence 44455566 8999998865544443333334689999999655322 11111111 1277777776555544
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
... + ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 321 1 00236788999999987653210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
..+++|+..+.+ |+++ |+++|... +....+... + ..+.+.+.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~-----------~---~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL-----------E---GDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh-----------c---CCCeEEEeCCCCHHHHHHHHH
Confidence 999999998876 5544 88887432 211111111 1 112345567899999999999
Q ss_pred hcCcceeccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHH
Q 045882 430 LAECCIVNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (832)
Q Consensus 430 ~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~a 505 (832)
.||++++||. .||++++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 322 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAG-------------------VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAA 322 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCC-------------------CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHH
Confidence 9999999997 799999999999994 4699999999888883 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 506 LHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|.++++ .++.++...++.++.+.. ..+++.+++
T Consensus 323 i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 323 LERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 999998 444444545555555443 444444443
No 97
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.75 E-value=3.3e-17 Score=183.32 Aligned_cols=240 Identities=13% Similarity=0.115 Sum_probs=163.7
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhc-CCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRF-HRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARH 268 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~-~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~ 268 (832)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 44566676 899999988777767666543 23455666776554322111 12235688887776655444
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccc--cc
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMD--IF 346 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld--~~ 346 (832)
+.. .++. ..++.++|+|||.+.+... .+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 431 1211 1246678999997654311 01 013467899999996 45
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC--CHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV--PLHEK 424 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v--~~~el 424 (832)
||+..+++|+.++ .+ ++.|+++|. |++.++ +++++++.|.. ..|.+ .+.+ +.+++
T Consensus 195 k~~~~l~~a~~~~---~~----~~~l~ivG~-----g~~~~~----l~~~~~~~~l~------~~v~f-~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQT---TG----EWQLHIIGD-----GSDFEK----CKAYSRELGIE------QRIIW-HGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhh---CC----CeEEEEEeC-----CccHHH----HHHHHHHcCCC------CeEEE-ecccCCcHHHH
Confidence 9999999999876 22 355888884 344333 44444443321 12444 4444 55899
Q ss_pred HHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc-CccccccCC---CceEeCCCCHH
Q 045882 425 TAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE-FIGCSPSLS---GAIRVNPWDID 500 (832)
Q Consensus 425 ~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~s~~l~---~a~~VnP~d~~ 500 (832)
..+|+.||++|+||..||||++++|||||+ .|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-------------------~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYG-------------------IPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcC-------------------CCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 999999999999999999999999999994 4699999 888888773 48999999999
Q ss_pred HHHHHHHHHhcCCH
Q 045882 501 AVADALHDAITMSD 514 (832)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (832)
++|++|.+.++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998664
No 98
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.75 E-value=9.6e-17 Score=175.50 Aligned_cols=274 Identities=16% Similarity=0.135 Sum_probs=189.5
Q ss_pred HHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH-----HHHHhCCEEeecChhhH
Q 045882 192 MEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL-----KALLNADLIGFHTFDYA 266 (832)
Q Consensus 192 ~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il-----~~ll~~dligf~t~~~~ 266 (832)
++..+| |+|++|..+..++..++++.....++.+.+|...+... .. +....++ ..+-.+|.+.+.+....
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 150 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SG--GLKRRLYLLLERLALRFTDKVIFQNEDDR 150 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cc--hhHHHHHHHHHHHHHhhccEEEEcCHHHH
Confidence 344566 89999988888887777775667778888886532211 10 1011111 22445789888888777
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccccc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIF 346 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~ 346 (832)
+.+.+.- ... ....+.+.|+|+|...+..... . ...++..++++||+.+.
T Consensus 151 ~~~~~~~----~~~--------------~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~ 200 (359)
T cd03808 151 DLALKLG----IIK--------------KKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKD 200 (359)
T ss_pred HHHHHhc----CCC--------------cCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccc
Confidence 7665320 000 1234567899999887653211 0 12467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
||+..+++|++.+.+++|+++ |+.+|.... .+ ..... ++.+.+. ...|.+++ . .+++..
T Consensus 201 k~~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~~~------~~~v~~~g-~--~~~~~~ 259 (359)
T cd03808 201 KGIDELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKLGL------EGRVEFLG-F--RDDVPE 259 (359)
T ss_pred cCHHHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhcCC------cceEEEee-c--cccHHH
Confidence 999999999999988888765 888875431 11 11111 1222111 12355544 3 678999
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVA 503 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A 503 (832)
+|+.||++++||..||+|++++|||+|+ .|+|+|+.+|..+.+. .|+++++.|+++++
T Consensus 260 ~~~~adi~i~ps~~e~~~~~~~Ea~~~G-------------------~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~ 320 (359)
T cd03808 260 LLAAADVFVLPSYREGLPRVLLEAMAMG-------------------RPVIATDVPGCREAVIDGVNGFLVPPGDAEALA 320 (359)
T ss_pred HHHhccEEEecCcccCcchHHHHHHHcC-------------------CCEEEecCCCchhhhhcCcceEEECCCCHHHHH
Confidence 9999999999999999999999999994 4699999999988883 38999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHH
Q 045882 504 DALHDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFM 541 (832)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l 541 (832)
++|.+++..+ +.+....++.+++ ...++...+++.++
T Consensus 321 ~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 321 DAIERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999988744 4444555556666 57788888877664
No 99
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.74 E-value=1.9e-16 Score=180.59 Aligned_cols=273 Identities=12% Similarity=0.044 Sum_probs=172.9
Q ss_pred CCEEEEeCcccc--cHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchH---HH---HHH--HHhCCEEeecChhhHHH
Q 045882 199 EDYVWIHDYHLM--VLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRN---EI---LKA--LLNADLIGFHTFDYARH 268 (832)
Q Consensus 199 ~d~vwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~---~i---l~~--ll~~dligf~t~~~~~~ 268 (832)
.|+|++|..... .+...+-.+..+.|+.+.+|--+++..-. ..+... .+ ++. .-.||.|...+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 399999985532 22233333445789999999644321101 011000 11 111 12367776666544333
Q ss_pred HHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHH---------H--------c
Q 045882 269 FLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIRE---------Q--------F 331 (832)
Q Consensus 269 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~---------~--------~ 331 (832)
+.+ .+ ....+|.++|+| +...|.+... ........+ . -
T Consensus 175 l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL----EEKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH----HHHHHHHHhccccccccccccccceecC
Confidence 321 11 112467788999 4566653211 111111111 0 1
Q ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHHh------CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC
Q 045882 332 KGKKVIVGVDDMDIFKGISLKLLAMEQLLKV------HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405 (832)
Q Consensus 332 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~ 405 (832)
++..++++++|+.+.||+..+++|+..+.+. +|++ .|+++|. |++.++++ +++++.
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i----~l~ivG~-----G~~~~~l~----~~~~~~----- 291 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKL----LCIITGK-----GPLKEKYL----ERIKEL----- 291 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCE----EEEEEec-----CccHHHHH----HHHHHc-----
Confidence 2456888999999999999999999998764 3544 4888883 34433444 444432
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcCcceec---ccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc
Q 045882 406 VPGYEPVILIDRPVPLHEKTAYYALAECCIVN---AVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI 482 (832)
Q Consensus 406 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt---S~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 482 (832)
+...++++.+.++.+++..+|++||++|++ +..+||+++++|||||+ .|+|+|...
T Consensus 292 --~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G-------------------~PVI~s~~~ 350 (415)
T cd03816 292 --KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCALDFK 350 (415)
T ss_pred --CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC-------------------CCEEEeCCC
Confidence 223588888889999999999999999864 33588999999999994 469999999
Q ss_pred cccccCC---CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 483 GCSPSLS---GAIRVNPWDIDAVADALHDAITMS--DVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 483 G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~--~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|+.+.+. +|++|+ |++++|++|.++++.+ +++++.+.++.+++.. .+|...+.+
T Consensus 351 ~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~ 409 (415)
T cd03816 351 CIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDR 409 (415)
T ss_pred CHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHH
Confidence 9888883 488884 9999999999999972 5666666666666654 346555543
No 100
>PHA01630 putative group 1 glycosyl transferase
Probab=99.72 E-value=1.9e-16 Score=174.68 Aligned_cols=211 Identities=14% Similarity=0.092 Sum_probs=148.8
Q ss_pred hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC
Q 045882 254 NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG 333 (832)
Q Consensus 254 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~ 333 (832)
.+|.|...+......+.+. +.. ...++.++|+|||.+.|.+... ...+
T Consensus 94 ~ad~ii~~S~~~~~~l~~~-----g~~--------------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~ 141 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYTS-----GLK--------------IPQPIYVIPHNLNPRMFEYKPK-------------EKPH 141 (331)
T ss_pred cCCEEEECCHHHHHHHHHc-----CCC--------------CCCCEEEECCCCCHHHcCCCcc-------------ccCC
Confidence 4788887776655554321 111 0125677999999988753210 0134
Q ss_pred CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 045882 334 KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVI 413 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~ 413 (832)
+.++++++|+.+.||++.+++|++++.+++|+++ |+.+|.. .. +. ++. +..+
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~~-----~~--~~--~l~----------~~~~----- 193 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSSN-----ML--DP--RLF----------GLNG----- 193 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeCc-----cc--ch--hhc----------cccc-----
Confidence 5677778899999999999999999998888765 8888721 11 11 110 1011
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---C
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---G 490 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~ 490 (832)
+.+.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|..+|.++.+. +
T Consensus 194 -~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G-------------------~PVIas~~gg~~E~i~~~~n 253 (331)
T PHA01630 194 -VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG-------------------LDVVVTEKGAWSEWVLSNLD 253 (331)
T ss_pred -eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC-------------------CCEEEeCCCCchhhccCCCc
Confidence 1346889999999999999999999999999999999994 4799999988888773 2
Q ss_pred --------------------ceEeCCCCHHHHHHHHHHHhcCC-HHHHHHHHH-HHHhhhhcCCHHHHHHHHHHHHH
Q 045882 491 --------------------AIRVNPWDIDAVADALHDAITMS-DVEKQLRHE-KHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 491 --------------------a~~VnP~d~~~~A~ai~~aL~m~-~~e~~~r~~-~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
|++++| |.+++++++.++|..+ +++++++.. ....+..+++....++.+++-++
T Consensus 254 g~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 254 VYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred eEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 444455 7788999999999764 233444333 44556778999999998887664
No 101
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.72 E-value=2.9e-16 Score=173.67 Aligned_cols=258 Identities=15% Similarity=0.117 Sum_probs=172.7
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHH-HHHHHHhCCEEeecChhhHHHHHHHHHHHhC
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNE-ILKALLNADLIGFHTFDYARHFLSCCSRMLG 278 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~-il~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 278 (832)
|+|++|+...+.....+... .+.+..+++|........+. ..... .-+.+..+|.+...+..+.+.+.. . +
T Consensus 85 Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~-~ 156 (357)
T cd03795 85 DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L-R 156 (357)
T ss_pred CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-c
Confidence 89999986654332222222 46788888996432221110 11111 223466788888877766654421 0 0
Q ss_pred CcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHHHHHHH
Q 045882 279 LDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKLLAMEQ 358 (832)
Q Consensus 279 ~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l~A~~~ 358 (832)
....++.++|+|+|...+.... .. .........++++|+++||+.+.||+..+++|+++
T Consensus 157 ---------------~~~~~~~~i~~gi~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~ 215 (357)
T cd03795 157 ---------------RFRDKVRVIPLGLDPARYPRPD-----AL-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAA 215 (357)
T ss_pred ---------------CCccceEEecCCCChhhcCCcc-----hh-hhHhhcCCCCCcEEEEecccccccCHHHHHHHHHh
Confidence 0013567799999988765321 11 11111122467899999999999999999999988
Q ss_pred HHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecc
Q 045882 359 LLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNA 438 (832)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS 438 (832)
+. ++.|+.+|.+ +... ++.+++.+.+ ..+-+.+.+.++.+++..+|+.||++++||
T Consensus 216 l~--------~~~l~i~G~g-----~~~~----~~~~~~~~~~-------~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 216 LP--------DAPLVIVGEG-----PLEA----ELEALAAALG-------LLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred cc--------CcEEEEEeCC-----hhHH----HHHHHHHhcC-------CcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 74 4558888742 3322 3333333322 223345567999999999999999999999
Q ss_pred c--ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC----CceEeCCCCHHHHHHHHHHHhcC
Q 045882 439 V--RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS----GAIRVNPWDIDAVADALHDAITM 512 (832)
Q Consensus 439 ~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~----~a~~VnP~d~~~~A~ai~~aL~m 512 (832)
. .||+|++++|||+|+ .|+|+|+.+|..+.+. .|++++|.|+++++++|.++++.
T Consensus 272 ~~~~e~~g~~~~Ea~~~g-------------------~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 272 VERSEAFGIVLLEAMAFG-------------------KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED 332 (357)
T ss_pred cccccccchHHHHHHHcC-------------------CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC
Confidence 6 599999999999994 4699999998887762 37899999999999999999984
Q ss_pred CHHHHHHHHHHHHhhhhc
Q 045882 513 SDVEKQLRHEKHYRYICS 530 (832)
Q Consensus 513 ~~~e~~~r~~~~~~~v~~ 530 (832)
+++++...++.++++.+
T Consensus 333 -~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 333 -PELRERLGEAARERAEE 349 (357)
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 45555555666666644
No 102
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.70 E-value=1.5e-15 Score=172.16 Aligned_cols=189 Identities=13% Similarity=0.110 Sum_probs=135.3
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEeccccccCCHHHHH----HHHHHHHHhCCCccCcEEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMDIFKGISLKL----LAMEQLLKVHPELQGKLVL 372 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld~~KGi~~~l----~A~~~ll~~~P~~~~~vvL 372 (832)
++.++|+|||.+.|.+....+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 567789999999886422100 111 3567899999999999999887 56667777889877 8
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceeccc-ccCCCCcceeee
Q 045882 373 VQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAV-RDGMNLMPYKYT 451 (832)
Q Consensus 373 vqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~ 451 (832)
+++|.. ++ . +++++. .. ..|.+ .|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~g-----~~-~----~~~~l~----~~------~~V~~-~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGAK-----PS-P----AVRALA----AL------PGVTV-TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECCC-----Ch-H----HHHHhc----cC------CCeEE-eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 888743 22 1 222221 11 12544 55665 68999999999999996 699999999999
Q ss_pred eeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-
Q 045882 452 ICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI- 528 (832)
Q Consensus 452 a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v- 528 (832)
||+ .|+|+|..++..... ..|+++. .|++++|++|.++++. ++.++...++.++++
T Consensus 320 a~G-------------------~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~ 378 (397)
T TIGR03087 320 AMA-------------------KPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVL 378 (397)
T ss_pred HcC-------------------CCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH
Confidence 994 468888764321111 2478885 8999999999999974 455566667778877
Q ss_pred hcCCHHHHHHHHHHHH
Q 045882 529 CSHDVAYWAHSFMQDL 544 (832)
Q Consensus 529 ~~~~~~~W~~~~l~~l 544 (832)
..+++...++++.+-+
T Consensus 379 ~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 379 QHYHWPRNLARLDALL 394 (397)
T ss_pred HhCCHHHHHHHHHHHh
Confidence 4688888888876654
No 103
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.70 E-value=4.9e-16 Score=169.25 Aligned_cols=247 Identities=17% Similarity=0.128 Sum_probs=166.4
Q ss_pred HHhCCCCCEEEEeCc-ccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 193 EVINPEEDYVWIHDY-HLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 193 ~~~~~~~d~vwvhDy-hl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
...++ |+|++|++ ...++..+. .+. +.++.+.+|..++...... .+........+..+|.+.+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33456 89999998 444444444 333 7899999998775432111 111112334566788888877766655543
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHH
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISL 351 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~ 351 (832)
.. +. ...++.++|+|+|...+..... ... ......++.+++++||+++.||+..
T Consensus 153 ~~----~~---------------~~~~~~vi~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----GI---------------PPDKIEVIYNPIDIEEIRALAE-----EPL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----cC---------------CccccEEecCCcChhhcCcccc-----hhh--hcCCCCCceEEEEEecchhhcChHH
Confidence 21 10 1236777999999887753221 000 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 045882 352 KLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA 431 (832)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A 431 (832)
+++|+.++.+++|+++ |+.+|.. +...+++ +++.+.+.. ..|.+ .+. .+++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~----~~~~~~~~~------~~v~~-~g~--~~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGDG-----PLREELE----ALAKELGLA------DRVHF-LGF--QSNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcCC-----ccHHHHH----HHHHhcCCC------ccEEE-ecc--cCCHHHHHHhC
Confidence 9999999988877665 8888742 3333333 333433221 12444 444 35788999999
Q ss_pred CcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHH
Q 045882 432 ECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 432 Dv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~ 508 (832)
|+++.||..||||++++|||+|+ .|+|+|+.+|..+.+. .|+++++.|.+++++++..
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~ 325 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMALG-------------------TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA 325 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHhC-------------------CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH
Confidence 99999999999999999999994 4699999999888873 4899999999999544444
Q ss_pred Hhc
Q 045882 509 AIT 511 (832)
Q Consensus 509 aL~ 511 (832)
+..
T Consensus 326 i~~ 328 (353)
T cd03811 326 LLD 328 (353)
T ss_pred HHh
Confidence 443
No 104
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.69 E-value=8.7e-16 Score=170.84 Aligned_cols=244 Identities=15% Similarity=0.142 Sum_probs=161.1
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCC----Chhhh-hcCCc-------------hHHHHHHHHhCCEEee
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFP----SSEIY-RTLPV-------------RNEILKALLNADLIGF 260 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP----~~e~~-r~lp~-------------r~~il~~ll~~dligf 260 (832)
.|+|+++..... ...+ ..+..+..+++|.|.+ ..+.+ ...+. +....+.+..+|.|..
T Consensus 84 ~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 489977643222 1222 4557788888998631 11111 11110 0111223467788887
Q ss_pred cChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEe
Q 045882 261 HTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGV 340 (832)
Q Consensus 261 ~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~V 340 (832)
.+....+.+... .+ . ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 777666555321 11 1 124678999988775211 234579999
Q ss_pred ccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC
Q 045882 341 DDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP 420 (832)
Q Consensus 341 dRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~ 420 (832)
||+.+.||++.+++|++++ | ++ |+.+|. +++.+++++ .. . ..|.+ .+.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~----~----~~V~~-~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA----G----PNVTF-LGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc----C----CCEEE-ecCCC
Confidence 9999999999999999865 3 44 888873 333333332 10 1 12554 56899
Q ss_pred HHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C--CceEeCCC
Q 045882 421 LHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S--GAIRVNPW 497 (832)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~--~a~~VnP~ 497 (832)
.+++.++|+.||++++||. ||||++++|||+|+ .|+|+|..+|..+.+ . .|++++|.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G-------------------~Pvi~~~~~~~~e~i~~~~~G~~~~~~ 311 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMASG-------------------TPVIAYGKGGALETVIDGVTGILFEEQ 311 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcC-------------------CCEEEeCCCCCcceeeCCCCEEEeCCC
Confidence 9999999999999999999 99999999999994 469999999988877 3 48999999
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHH
Q 045882 498 DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAH 538 (832)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (832)
|++++|++|..+++.++.. .+.+++....++..+..+
T Consensus 312 ~~~~la~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~ 348 (351)
T cd03804 312 TVESLAAAVERFEKNEDFD----PQAIRAHAERFSESRFRE 348 (351)
T ss_pred CHHHHHHHHHHHHhCcccC----HHHHHHHHHhcCHHHHHH
Confidence 9999999999999876421 223334444455444444
No 105
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.69 E-value=2.3e-15 Score=165.28 Aligned_cols=246 Identities=15% Similarity=0.068 Sum_probs=161.1
Q ss_pred HHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHH
Q 045882 191 IMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFL 270 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl 270 (832)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .........+.+-+-+......+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3344455 8999999888876 2 334567899999977643211 122333344443332222211110
Q ss_pred HHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHH
Q 045882 271 SCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 271 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~ 350 (832)
. . .++.++|+|+|++.|... ..++..++++||+.+.||+.
T Consensus 148 --------------------~---~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 --------------------P---L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred --------------------c---c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 0 0 356789999999887531 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
.+++|+.+ ++++ |+++|... +...+...+.+... + .+-+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~-~---------~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL-D---------GPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc-c---------CCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 3444 88887432 21222222222210 0 122344568999999999999
Q ss_pred cCcceeccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHH
Q 045882 431 AECCIVNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADAL 506 (832)
Q Consensus 431 ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai 506 (832)
||++|+||. .||||++++|||||+ .|+|+|+.+|..+.+. +|+++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~G-------------------~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMACG-------------------TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhcC-------------------CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 599999999999994 4799999999988883 4889987 99999999
Q ss_pred HHHhcCCHHHHHHHHHHHHhh-hhcCCHHHHHHHHHH
Q 045882 507 HDAITMSDVEKQLRHEKHYRY-ICSHDVAYWAHSFMQ 542 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~~l~ 542 (832)
.+++..+.+ +.++. ...++...-++++++
T Consensus 303 ~~l~~~~~~-------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRA-------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHH-------HHHHHHHHhCCHHHHHHHHHH
Confidence 998765322 11222 244566655555544
No 106
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.68 E-value=2.2e-15 Score=167.20 Aligned_cols=264 Identities=14% Similarity=0.024 Sum_probs=169.3
Q ss_pred CEEEEeCcccc--cHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH-----HHHHhCCEEeecChhhHHHHHHH
Q 045882 200 DYVWIHDYHLM--VLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL-----KALLNADLIGFHTFDYARHFLSC 272 (832)
Q Consensus 200 d~vwvhDyhl~--llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il-----~~ll~~dligf~t~~~~~~Fl~~ 272 (832)
|+++||..... .+..++++ .+.++.+.+|..-.....+.. + ...++ ..+..+|.|...+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 56666655444 33333333 367888888852111111110 1 11111 2345688888777644444321
Q ss_pred HHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CCCEEEEEeccccccCCHH
Q 045882 273 CSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 273 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~VdRld~~KGi~ 350 (832)
..+ ... .++|+|+|...+.. ....++.+ ..++.++++||+.+.||+.
T Consensus 161 ---~~~----------------~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---KYG----------------RDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---hcC----------------CCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 111 111 57899999876542 01112222 3456788999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
.+++|+.++.. ++.|+++|... +..++.+.+.+ +++. .+-+.+.+.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~-------~~~~---~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE-------KAAA---DPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH-------HhCC---CCcEEEccccChHHHHHHHHh
Confidence 99999987632 34588888542 11223333332 1121 123345678999999999999
Q ss_pred cCcceecccc-cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceEeCCCCHHHHHHHHHH
Q 045882 431 AECCIVNAVR-DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 431 ADv~vvtS~~-EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~VnP~d~~~~A~ai~~ 508 (832)
||++++||.. ||||++++|||+|+ .|+|+|..+|..+.+ .+|..++|.|. +|++|.+
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G-------------------~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYG-------------------CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcC-------------------CCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 9999999999 99999999999994 479999999888877 45888888776 9999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFMQD 543 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l~~ 543 (832)
+++.++ .+....++.++++. .+++..-++++++.
T Consensus 327 l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 327 LEADPE-EVSAMAKAARERIREKYTWEKIADQYEEL 361 (363)
T ss_pred HHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 998663 34444455566655 47877777777654
No 107
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.66 E-value=3.7e-15 Score=165.39 Aligned_cols=193 Identities=15% Similarity=0.146 Sum_probs=139.7
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccc--cCCHHHHHHHHHHHHHh-CCCccCcEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDI--FKGISLKLLAMEQLLKV-HPELQGKLV 371 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~--~KGi~~~l~A~~~ll~~-~P~~~~~vv 371 (832)
++.++|+|||...+.+.. . ...++.+ .++.+++.+++... .||+..+++|++.+.++ .|+ +.
T Consensus 160 ~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~~ 227 (365)
T cd03825 160 PIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----IE 227 (365)
T ss_pred ceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----eE
Confidence 677899999998774321 1 1223333 34566666666654 89999999999988765 444 44
Q ss_pred EEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC-HHHHHHHHHhcCcceecccccCCCCcceee
Q 045882 372 LVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVP-LHEKTAYYALAECCIVNAVRDGMNLMPYKY 450 (832)
Q Consensus 372 Lvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~-~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 450 (832)
++.+|... .... . .. . ..|. +.+.++ .+++..+|+.||+++.||..||||++++||
T Consensus 228 ~~i~G~~~-----~~~~---~------~~----~----~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Ea 284 (365)
T cd03825 228 LVVFGASD-----PEIP---P------DL----P----FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEA 284 (365)
T ss_pred EEEeCCCc-----hhhh---c------cC----C----CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHH
Confidence 88887432 1100 0 00 0 1244 455677 889999999999999999999999999999
Q ss_pred eeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q 045882 451 TICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRY 527 (832)
Q Consensus 451 ~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~ 527 (832)
|+|+ .|+|+|..+|..+.+. .|+++++.|.+++|++|.++++.+ +++....++.+++
T Consensus 285 m~~g-------------------~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~ 344 (365)
T cd03825 285 LACG-------------------TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAAREL 344 (365)
T ss_pred HhcC-------------------CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 9994 4699999988888873 489999999999999999999744 4455555566666
Q ss_pred h-hcCCHHHHHHHHHHHHH
Q 045882 528 I-CSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 528 v-~~~~~~~W~~~~l~~l~ 545 (832)
+ ..++....++.+++-.+
T Consensus 345 ~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 345 AENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHhcCHHHHHHHHHHHHh
Confidence 6 45788888888776554
No 108
>PLN02275 transferase, transferring glycosyl groups
Probab=99.65 E-value=3.2e-15 Score=168.05 Aligned_cols=239 Identities=11% Similarity=-0.004 Sum_probs=155.1
Q ss_pred hCCCCCEEEEeCccccc--HHHHHHhhcCCCeEEEEecCCCCChhhhhc-C---Cch----HHHHHH-HHhCCEEeecCh
Q 045882 195 INPEEDYVWIHDYHLMV--LPTFLRRRFHRVKLGFFLHSPFPSSEIYRT-L---PVR----NEILKA-LLNADLIGFHTF 263 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~l--lp~~lr~~~~~~~ig~flH~PfP~~e~~r~-l---p~r----~~il~~-ll~~dligf~t~ 263 (832)
.+| |+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +.. ..+-+. .-.+|.|...+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 355 899999877532 233333334467888889965321 1100 0 000 111111 234677777776
Q ss_pred hhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccc
Q 045882 264 DYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDM 343 (832)
Q Consensus 264 ~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRl 343 (832)
...+...+. . |.. +.++|+|+ .+.|.+... . ..++ .+...++++++|+
T Consensus 175 ~~~~~l~~~----~----------------g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQN----W----------------GIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHHh----c----------------CCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 555544210 0 111 56788884 466643211 0 1111 1345688899999
Q ss_pred cccCCHHHHHHHHHHHHH-----------------hCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCC
Q 045882 344 DIFKGISLKLLAMEQLLK-----------------VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGV 406 (832)
Q Consensus 344 d~~KGi~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~ 406 (832)
.+.||+..+++|+..+.. ++|++ .|+++| +|++.+++++.++ +. |
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i----~l~ivG-----~G~~~~~l~~~~~----~~----~- 284 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRL----LFIITG-----KGPQKAMYEEKIS----RL----N- 284 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCe----EEEEEe-----CCCCHHHHHHHHH----Hc----C-
Confidence 999999999999988752 34554 499888 4455444544443 32 2
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcCcceecc---cccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc
Q 045882 407 PGYEPVILIDRPVPLHEKTAYYALAECCIVNA---VRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG 483 (832)
Q Consensus 407 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (832)
...++++.+.++.+++..+|+.||+||+++ ..|||+++.+|||||+ .|+|+|..+|
T Consensus 285 --l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G-------------------~PVVa~~~gg 343 (371)
T PLN02275 285 --LRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCAVSYSC 343 (371)
T ss_pred --CCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC-------------------CCEEEecCCC
Confidence 234777787889999999999999999753 2489999999999994 4699999989
Q ss_pred ccccCC---CceEeCCCCHHHHHHHHHHHh
Q 045882 484 CSPSLS---GAIRVNPWDIDAVADALHDAI 510 (832)
Q Consensus 484 ~s~~l~---~a~~VnP~d~~~~A~ai~~aL 510 (832)
..+.+. +|++|+ |++++|++|.++|
T Consensus 344 ~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 344 IGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred hHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 888873 488986 6999999998765
No 109
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.65 E-value=1.5e-14 Score=165.70 Aligned_cols=275 Identities=17% Similarity=0.192 Sum_probs=171.6
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHh-hcCCCeEEEEecCCCC-ChhhhhcCCchHHHHHHHH-hCCEEeecChh
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRR-RFHRVKLGFFLHSPFP-SSEIYRTLPVRNEILKALL-NADLIGFHTFD 264 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~-~~~~~~ig~flH~PfP-~~e~~r~lp~r~~il~~ll-~~dligf~t~~ 264 (832)
..++++.++| |+|++|.+.++ |.+++. +..++++....|.-.+ +...|+.+ ..+.+.++ .+|.|..++..
T Consensus 116 ~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~ 188 (425)
T PRK05749 116 VRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEE 188 (425)
T ss_pred HHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHH
Confidence 4455677788 89999988764 555533 2335667665553222 22222222 22333333 47999999988
Q ss_pred hHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEeccc
Q 045882 265 YARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDM 343 (832)
Q Consensus 265 ~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRl 343 (832)
..+.+.+ +|+. .. +.++|++ +.+.+. .+........+++.+ .++++++++++.
T Consensus 189 ~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~~~~~vil~~~~~ 242 (425)
T PRK05749 189 DAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLAPNRPVWIAASTH 242 (425)
T ss_pred HHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8877653 2321 11 3345542 222211 111122344566666 678889999875
Q ss_pred cccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC-CCC-c----ccEEEecC
Q 045882 344 DIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG-VPG-Y----EPVILIDR 417 (832)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~-~~~-~----~pv~~~~~ 417 (832)
.|+...+++||.++++++|+++ |+++| ++++. .+++++++++.+..+. ..+ . ...+++.+
T Consensus 243 --~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~ 308 (425)
T PRK05749 243 --EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD 308 (425)
T ss_pred --chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe
Confidence 6889999999999998899876 87776 34442 1234444444332210 000 0 01223332
Q ss_pred CCCHHHHHHHHHhcCccee-cccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc----ccC-CCc
Q 045882 418 PVPLHEKTAYYALAECCIV-NAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS----PSL-SGA 491 (832)
Q Consensus 418 ~v~~~el~aly~~ADv~vv-tS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s----~~l-~~a 491 (832)
+..|+..+|+.||++++ +|..||+|++++|||+|+ .|+|++...|.. +.+ .+|
T Consensus 309 --~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G-------------------~PVI~g~~~~~~~e~~~~~~~~g 367 (425)
T PRK05749 309 --TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG-------------------VPVISGPHTFNFKEIFERLLQAG 367 (425)
T ss_pred --cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC-------------------CCEEECCCccCHHHHHHHHHHCC
Confidence 36799999999999666 678899999999999994 468887654432 232 457
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 492 IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 492 ~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
.++.|.|.+++|++|.++++ .++.+....++.++++.++
T Consensus 368 ~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 368 AAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhC
Confidence 88889999999999999997 4556666677778888765
No 110
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.63 E-value=2.3e-14 Score=162.94 Aligned_cols=262 Identities=19% Similarity=0.197 Sum_probs=180.7
Q ss_pred CEEEEeCcccccHHHHHHhh---cCCCeEEEEecCC-----CC-ChhhhhcCCc---h---------HHHH-HHHHhCCE
Q 045882 200 DYVWIHDYHLMVLPTFLRRR---FHRVKLGFFLHSP-----FP-SSEIYRTLPV---R---------NEIL-KALLNADL 257 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~---~~~~~ig~flH~P-----fP-~~e~~r~lp~---r---------~~il-~~ll~~dl 257 (832)
|||++||||+.|+|.++++. ...++..|+.|.= |+ ...-.-.||. . -..+ -|+..||.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7789999999932 23 1111123341 0 0122 24666677
Q ss_pred EeecChhhHHHHHHHHHHHhCCcccccCcee-eEEEcCeEEEEEEeecCCCchHHHhhcCC-----------CChHHHHH
Q 045882 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGYI-GLEYFGRTIYVKILHVGIHMGRLESALNH-----------PSSSIKVK 325 (832)
Q Consensus 258 igf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~-~~~~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~~~~ 325 (832)
|.--++.|+..-.. ...| .|.. .+.+ +.-.+.-+=+|||...+.+.... +.......
T Consensus 212 vttVSptYa~Ei~t---~~~g------~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 212 VTTVSPTYAGEIYT---PEYG------EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEECHHHHHhhcc---cccc------ccchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 76666666654430 0000 0000 0111 11344445677777765432110 01222334
Q ss_pred HHHHHc--C---CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 045882 326 EIREQF--K---GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRI 400 (832)
Q Consensus 326 ~l~~~~--~---~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~i 400 (832)
.|++.+ . +.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ + ..++..+..+++++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g------d-~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG------D-PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC------c-HHHHHHHHHHHHhc
Confidence 455665 2 4699999999999999999999999999987 55 7878743 1 35777888888887
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc
Q 045882 401 NETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE 480 (832)
Q Consensus 401 N~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (832)
..++. +.-..+..-...+|+.||++++||..|++||+-+++|.- ++++|+.+
T Consensus 348 ~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-------------------GtvpIv~~ 399 (487)
T COG0297 348 PGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-------------------GTLPIVRE 399 (487)
T ss_pred CceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-------------------CCcceEcc
Confidence 65432 222344556678999999999999999999999999997 56899999
Q ss_pred CccccccCC-----------CceEeCCCCHHHHHHHHHHHhcCC
Q 045882 481 FIGCSPSLS-----------GAIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 481 ~~G~s~~l~-----------~a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+|.++.+. .|+++.|.|.++++.||.+|+..-
T Consensus 400 tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y 443 (487)
T COG0297 400 TGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLY 443 (487)
T ss_pred cCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHh
Confidence 999999883 278888889999999999999753
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.59 E-value=5.1e-15 Score=147.28 Aligned_cols=143 Identities=23% Similarity=0.370 Sum_probs=112.4
Q ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHHh-CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 332 KGKKVIVGVDDMDIFKGISLKLLAMEQLLKV-HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 332 ~~~~vil~VdRld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 66655 888872 2222 2333333333221 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-C
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-S 489 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~ 489 (832)
.+.++. .++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+ +
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred cccccc-cccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 255554 566899999999999999999999999999999999 4589999988888887 2
Q ss_pred --CceEeCCCCHHHHHHHHHHHhcCC
Q 045882 490 --GAIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 490 --~a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.|++++|.|+++++++|.+++..+
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 379999999999999999999865
No 112
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.49 E-value=2.2e-12 Score=145.31 Aligned_cols=266 Identities=14% Similarity=0.118 Sum_probs=165.2
Q ss_pred hCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCc-hHHHHHHHHhCCEEeecChhhHHHHHHHH
Q 045882 195 INPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPV-RNEILKALLNADLIGFHTFDYARHFLSCC 273 (832)
Q Consensus 195 ~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~-r~~il~~ll~~dligf~t~~~~~~Fl~~~ 273 (832)
.+.++.++|.+..-+..+... .+..++.+-+|-.|+..... -+. ....-+.+-.||+|...+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 354457888875555444333 45677777766555432211 011 111223456789988777655543311
Q ss_pred HHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHH
Q 045882 274 SRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKL 353 (832)
Q Consensus 274 ~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l 353 (832)
+ + .++.++|+|+|.+.|......+.. .+.+. ..++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~~--~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADLA--ALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHHh--cCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246679999999999753321111 11111 14678999999999966654 33
Q ss_pred HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCc
Q 045882 354 LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAEC 433 (832)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv 433 (832)
. .+.+.+|+++ |+.||... ...+ . ..+ . ....|++ .+.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~--~~~~---~----~~~----~------~~~nV~~-~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD--VSID---P----SAL----L------RLPNVHY-LGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc--CccC---h----hHh----c------cCCCEEE-eCCCCHHHHHHHHHhCCE
Confidence 3 3445688886 88888431 0011 0 111 0 0122554 568999999999999999
Q ss_pred ceeccc-----ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCceEeCCCCHHHHHHHHHH
Q 045882 434 CIVNAV-----RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGAIRVNPWDIDAVADALHD 508 (832)
Q Consensus 434 ~vvtS~-----~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a~~VnP~d~~~~A~ai~~ 508 (832)
+++|+. +.++++..+|||||+. |+|+|.+.++.+.. ++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~-------------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGK-------------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCC-------------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHH
Confidence 999985 4578999999999954 68888766554433 3444556799999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 509 AITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
+|..+..++..+. .+.+.+|++..=++.+++.|.
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHH
Confidence 8865544333222 226788888887887776554
No 113
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.48 E-value=1e-12 Score=129.72 Aligned_cols=192 Identities=20% Similarity=0.245 Sum_probs=123.9
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC--CCceEEEeCCEEEEeCCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC--ENLGIAAEHGYYLRWTKK 655 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~~l~liaenGa~i~~~~~ 655 (832)
..++||+|+||||+++. -+..|.. ..|.+| ++.|..|+++|..++..+..+-..+ +..++|+|||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~~pA~---pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEWQPAA---PVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCCCccc---hHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999933 2333433 455566 5779999999999999988877665 468999999999998743
Q ss_pred ccEEEc--Cc-------ccchh-HHHHHHHHHHHHHhcCCceEEee----------------------cceeEEEEeccC
Q 045882 656 SEWETS--TV-------AADFE-WKRITEPVMKLYTEATDGSYIEK----------------------KETALVWHYQDA 703 (832)
Q Consensus 656 ~~w~~~--~~-------~~~~~-w~~~v~~i~~~~~e~~~gs~ie~----------------------k~~~l~~~~~~a 703 (832)
|... .+ ..... -.+.+.+.++...+...-.+..+ ++++.+...+.
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs- 157 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRS- 157 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecc-
Confidence 1110 00 00010 01233344433333222112111 11111111111
Q ss_pred CCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc
Q 045882 704 APGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 704 d~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a 783 (832)
..+...++...+...++.+..|..+..|......||.|++.+++.+...+- ..-++..||+.||.+||+..
T Consensus 158 --------~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~ 228 (274)
T COG3769 158 --------SDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVM 228 (274)
T ss_pred --------cchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhh
Confidence 123445556666666788899999999989998999999999997644332 22599999999999999999
Q ss_pred ccc
Q 045882 784 SQA 786 (832)
Q Consensus 784 ~~~ 786 (832)
..+
T Consensus 229 d~A 231 (274)
T COG3769 229 DYA 231 (274)
T ss_pred hhh
Confidence 853
No 114
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.46 E-value=1.2e-13 Score=145.85 Aligned_cols=188 Identities=16% Similarity=0.162 Sum_probs=143.5
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-CCCEEEEEeccccccCCHH
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF-KGKKVIVGVDDMDIFKGIS 350 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~VdRld~~KGi~ 350 (832)
...|.+.+++.++.+.+ +.-.-..-+|.++|+-++...|.+.... +. .+...|+.++||-+.||++
T Consensus 145 ~id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiD 211 (426)
T KOG1111|consen 145 NIDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGID 211 (426)
T ss_pred CCCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchH
Confidence 34566677887776542 2222234578899999999999864321 22 3558999999999999999
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
+++..+.++.++||+.+ ++.+| +||....+++.+++. +. +.+|++ .|.++++++...|..
T Consensus 212 ll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~l------~~rV~~-lG~v~h~~Vr~vl~~ 271 (426)
T KOG1111|consen 212 LLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----FL------QDRVVM-LGTVPHDRVRDVLVR 271 (426)
T ss_pred HHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----hc------cCceEE-ecccchHHHHHHHhc
Confidence 99999999999999988 88887 555433444443333 11 135665 558999999999999
Q ss_pred cCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCc-eEeCCCCHHHHHHHHHHH
Q 045882 431 AECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGA-IRVNPWDIDAVADALHDA 509 (832)
Q Consensus 431 ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a-~~VnP~d~~~~A~ai~~a 509 (832)
-|||+.||+.|.|+++..||+.|+. ++|.+..+|..+.|... +..-+-.++++++++.+|
T Consensus 272 G~IFlntSlTEafc~~ivEAaScGL-------------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~a 332 (426)
T KOG1111|consen 272 GDIFLNTSLTEAFCMVIVEAASCGL-------------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKA 332 (426)
T ss_pred CcEEeccHHHHHHHHHHHHHHhCCC-------------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHH
Confidence 9999999999999999999999954 58888888888888544 435555788999999998
Q ss_pred hc
Q 045882 510 IT 511 (832)
Q Consensus 510 L~ 511 (832)
++
T Consensus 333 i~ 334 (426)
T KOG1111|consen 333 IT 334 (426)
T ss_pred HH
Confidence 86
No 115
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.38 E-value=5e-11 Score=134.70 Aligned_cols=191 Identities=13% Similarity=0.092 Sum_probs=123.5
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEeccccccCCHHHHHHHHHHHHHh----CCCccCcE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMDIFKGISLKLLAMEQLLKV----HPELQGKL 370 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~----~P~~~~~v 370 (832)
+|.+++++|+...+... + ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 45557888876433211 1 123456666 4688999999999999999999999876522 34332
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceee
Q 045882 371 VLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKY 450 (832)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea 450 (832)
++.+++ +++ ++++++++... + ..|.+ .+.+ +++..||++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~------~----~~v~~-~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW------K----IPVKV-RGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc------c----CCeEE-Eecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 23333333210 1 12444 4455 47999999999999865 37899999
Q ss_pred eeeecCCCCchhhhhhhcCCCCCceEEeccC-----ccccccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 045882 451 TICRQGTPKMDEAMELASVCPRTSMLVISEF-----IGCSPSL-SGAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKH 524 (832)
Q Consensus 451 ~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~s~~l-~~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~ 524 (832)
|+|+. |+|++.. .|.++.+ .++.-+.+.|+++++++|.+++..+++.++.+.++.
T Consensus 299 ma~g~-------------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIRGL-------------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHcCC-------------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99954 6888875 2333444 344344468999999999999986455666666677
Q ss_pred HhhhhcCCHHHHHHHHHH
Q 045882 525 YRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 525 ~~~v~~~~~~~W~~~~l~ 542 (832)
+++...+....-++.+++
T Consensus 360 ~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 360 LKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHhcCCchHHHHHHHHHH
Confidence 777777766665554443
No 116
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.27 E-value=1.4e-10 Score=130.42 Aligned_cols=185 Identities=12% Similarity=0.107 Sum_probs=139.6
Q ss_pred CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCc-EEEEEEecC-CCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 334 KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGK-LVLVQIVNP-ARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~-vvLvqi~~p-~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
..++..+.|+.+-||+...|.||..+...-|+..-. .-++..+++ +.+...+..++..++.+++++.+.. | .
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~-g-----~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL-G-----Q 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc-C-----c
Confidence 688999999999999999999999998887652222 223434432 3344455566777888888775321 2 3
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--- 488 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--- 488 (832)
++++..+.++.+...+++.+.+..+++..|.||+|++|||+|+. |+|++..+|..+.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl-------------------PvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL-------------------PVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC-------------------CEEEecCCCceEEEEcC
Confidence 56666678888887777888888888888999999999999954 69999999999999
Q ss_pred CCceEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHHhhhhc-CCHHHHHHHHHHHHHHHHH
Q 045882 489 SGAIRVNPWDID---AVADALHDAITMSDVEKQLRHEKHYRYICS-HDVAYWAHSFMQDLERACR 549 (832)
Q Consensus 489 ~~a~~VnP~d~~---~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~ 549 (832)
.+|++++| +.+ .+|++|.+..+.++. +....++.++.|.+ ++. +.|.+.+.....
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSW----QHYSERIASVLG 466 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhH----HHHHHHHHHHhH
Confidence 35999999 666 599999999986554 77777788888887 554 555555554433
No 117
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.20 E-value=2.4e-10 Score=117.25 Aligned_cols=112 Identities=17% Similarity=0.182 Sum_probs=81.8
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC
Q 045882 339 GVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRP 418 (832)
Q Consensus 339 ~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~ 418 (832)
++||+.+.||+..+++|+..+.+++|+++ ++.+|... +....+..+.. .+. ...|.++...
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~--------~~~--~~~v~~~~~~ 169 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA--------LLL--LDRVIFLGGL 169 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh--------cCC--cccEEEeCCC
Confidence 99999999999999999999998888765 88888432 11111111111 111 1236555532
Q ss_pred CCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC
Q 045882 419 VPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL 488 (832)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l 488 (832)
.+.+++..+++.||+++.||..||++++++|||+|+ .|+|+|+..|..+.+
T Consensus 170 ~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g-------------------~pvi~s~~~~~~e~i 220 (229)
T cd01635 170 DPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG-------------------LPVIATDVGGPPEIV 220 (229)
T ss_pred CcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC-------------------CCEEEcCCCCcceEE
Confidence 355666677777999999999999999999999994 479999999887755
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.17 E-value=5.6e-10 Score=120.37 Aligned_cols=198 Identities=19% Similarity=0.233 Sum_probs=139.5
Q ss_pred EEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCC--CEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEE
Q 045882 298 YVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKG--KKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQI 375 (832)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~--~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (832)
.+.+.|.|++...+.... .....+ ..++++++|+++.||+...++|+..+.+..|+ +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~ 236 (381)
T COG0438 173 KIVVIPNGIDTEKFAPAR------------IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIV 236 (381)
T ss_pred CceEecCCcCHHHcCccc------------cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEE
Confidence 566789999998876320 000112 47999999999999999999999999887776 347777
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 376 VNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 376 ~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
|..... ...+..++.+.+.. ..|.+ .+.++.+++..+|+.||+++.||..||+|++..|||+|+
T Consensus 237 g~~~~~--------~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g- 300 (381)
T COG0438 237 GDGPER--------REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG- 300 (381)
T ss_pred cCCCcc--------HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC-
Confidence 644311 12222343333221 12444 667888899999999999999999999999999999984
Q ss_pred CCCCchhhhhhhcCCCCCceEEeccCccccccCCC---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcC
Q 045882 456 GTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSG---AIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSH 531 (832)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~---a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~ 531 (832)
.|+|+|...|..+.+.. |+++++.|.+++++++..++++. +.++...+..++.+ ..+
T Consensus 301 ------------------~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~ 361 (381)
T COG0438 301 ------------------TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEF 361 (381)
T ss_pred ------------------CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhc
Confidence 46899999988888843 77888888999999999999876 33333333233333 466
Q ss_pred CHHHHHHHHHHHHHH
Q 045882 532 DVAYWAHSFMQDLER 546 (832)
Q Consensus 532 ~~~~W~~~~l~~l~~ 546 (832)
++..-+..+..-+..
T Consensus 362 ~~~~~~~~~~~~~~~ 376 (381)
T COG0438 362 SWERIAEQLLELYEE 376 (381)
T ss_pred CHHHHHHHHHHHHHH
Confidence 666666555544444
No 119
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.15 E-value=4.6e-09 Score=118.51 Aligned_cols=271 Identities=10% Similarity=0.079 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecC
Q 045882 183 ANKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHT 262 (832)
Q Consensus 183 vN~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t 262 (832)
.+..-..++++..+| |+|..| +....++.+.+....++++....+-..+... ++ .-.+|.+...+
T Consensus 91 ~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~----------~~--~~~ad~i~~~s 155 (380)
T PRK13609 91 FGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHKI----------WV--HREVDRYFVAT 155 (380)
T ss_pred HHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCcc----------cc--cCCCCEEEECC
Confidence 333445566677788 899885 6666777776666656666533321111100 01 11588888777
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCch-HHHhhcCCCChHHHHHHHHHHc---CCC-EEE
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMG-RLESALNHPSSSIKVKEIREQF---KGK-KVI 337 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~-~vi 337 (832)
....+.+.+ .|+. ..++.++ |++.. .|... .+ ...+++++ +++ .++
T Consensus 156 ~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~~il 206 (380)
T PRK13609 156 DHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKKILL 206 (380)
T ss_pred HHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCcEEE
Confidence 554444332 1221 1123233 44332 23211 11 12345555 244 456
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 045882 338 VGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDR 417 (832)
Q Consensus 338 l~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~ 417 (832)
+..|++...||+...++++. +.|+++ ++.++.. .+ .+++++++++++.+ ..|+++ +
T Consensus 207 ~~~G~~~~~k~~~~li~~l~----~~~~~~----~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~~-g 262 (380)
T PRK13609 207 IMAGAHGVLGNVKELCQSLM----SVPDLQ----VVVVCGK---NE----ALKQSLEDLQETNP--------DALKVF-G 262 (380)
T ss_pred EEcCCCCCCcCHHHHHHHHh----hCCCcE----EEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEEE-e
Confidence 66799999999998888864 235554 7766532 12 23344444443321 236665 4
Q ss_pred CCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEecc-Ccccc----ccC-CCc
Q 045882 418 PVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISE-FIGCS----PSL-SGA 491 (832)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~s----~~l-~~a 491 (832)
.+ +++..+|++||++|. ++.|++++|||+|+. |+|++. ..|.. ..+ ..|
T Consensus 263 ~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-------------------PvI~~~~~~g~~~~n~~~~~~~G 317 (380)
T PRK13609 263 YV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV-------------------PVILYKPVPGQEKENAMYFERKG 317 (380)
T ss_pred ch--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-------------------CEEECCCCCCcchHHHHHHHhCC
Confidence 54 468899999999874 455899999999954 577765 44421 122 234
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHH
Q 045882 492 IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERA 547 (832)
Q Consensus 492 ~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (832)
..+.+.|.++++++|.++++. ++.+..+.++.+++...++....++.+++.+...
T Consensus 318 ~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 318 AAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred cEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 455578999999999999985 3444455555666777788888888887766543
No 120
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.14 E-value=1.6e-09 Score=121.08 Aligned_cols=257 Identities=14% Similarity=0.061 Sum_probs=156.4
Q ss_pred HHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHH
Q 045882 190 KIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHF 269 (832)
Q Consensus 190 ~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~F 269 (832)
++++..+| |+|+.|+....+... +..+..+.|+.++.|..+|.. -+.++ .-.+|.+...+..- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---h
Confidence 44555666 999999866554444 444556788887766544421 01111 11345443333210 0
Q ss_pred HHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCH
Q 045882 270 LSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGI 349 (832)
Q Consensus 270 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi 349 (832)
. . ....++.++|+|+|.+.+.+ +.. ..++ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 11236778999999876542 110 1111 111367889999999999998
Q ss_pred HHHH-HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 045882 350 SLKL-LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYY 428 (832)
Q Consensus 350 ~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly 428 (832)
..++ +|+.++.+. | .+++++|.+ +. +++.+.++ .+ .. |.+. +.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~g-----~~-~~~~~~~~---------~~---~~-v~~~-g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGKG-----DL-EEVRAAYA---------AG---IN-AEVV-PFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCCC-----cH-HHHHHHhh---------cC---Cc-EEEe-ehH--hhHHHHH
Confidence 7776 888777432 2 346666632 21 22222211 12 12 4443 443 6899999
Q ss_pred HhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc--------ccccC---CCceEeCCC
Q 045882 429 ALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG--------CSPSL---SGAIRVNPW 497 (832)
Q Consensus 429 ~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~s~~l---~~a~~VnP~ 497 (832)
+.||+++.+| | +.+.+|||+|+. |+|++...| .++.+ ..|++++|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g~-------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAGL-------------------PAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhCC-------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 588999999955 466654432 12334 247889888
Q ss_pred C--HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 498 D--IDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 498 d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
| +++++++|.++++. ++.++...+..+++..+.....-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999986 4555555666677777787777777776654
No 121
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.14 E-value=3e-09 Score=118.20 Aligned_cols=248 Identities=17% Similarity=0.154 Sum_probs=146.8
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHH
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYAR 267 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~ 267 (832)
+.++++..+| |+|+.|..... ++..+..+..++++.++-|..||.. . +.++ ...+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3345566677 89999976553 3444444455677766555545421 0 1111 1125666655543222
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CCCEEEEEecccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KGKKVIVGVDDMD 344 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~VdRld 344 (832)
. + ...++.++|+|+|.+.+... + . ++++ .++++++.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11255678999998776531 0 1 2333 4677888888888
Q ss_pred ccCCHHHHH-HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHH
Q 045882 345 IFKGISLKL-LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHE 423 (832)
Q Consensus 345 ~~KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~e 423 (832)
..|+...++ .|++.+. + ++ +.++.++. ++ +.+++++.+ ++. + ..|++++ .+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~~~----~~~----~----~~v~~~g-~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKKAY----EEL----G----VNYEVFP-FI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHHHH----hcc----C----CCeEEee-hh--hh
Confidence 888877654 7776664 2 22 23333331 22 233344333 221 1 1255444 33 78
Q ss_pred HHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc--------ccccC---CCce
Q 045882 424 KTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG--------CSPSL---SGAI 492 (832)
Q Consensus 424 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~s~~l---~~a~ 492 (832)
+..+|+.||++|.+| | +.+++|||+|+. |+|++...| .++.+ ..|+
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~ 302 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALGL-------------------PAILIPLPYAADDHQTANARALVKAGAAV 302 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhCC-------------------CEEEeecCCCCCCcHHHhHHHHHhCCCEE
Confidence 999999999999876 3 578999999955 567665433 12334 2478
Q ss_pred EeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHH
Q 045882 493 RVNPW--DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVA 534 (832)
Q Consensus 493 ~VnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~ 534 (832)
+++|. |.++++++|.+++. +++.++...++.++++..+...
T Consensus 303 ~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~ 345 (350)
T cd03785 303 LIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAE 345 (350)
T ss_pred EEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHH
Confidence 99887 89999999999996 4555555556666666655433
No 122
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.05 E-value=5.1e-09 Score=116.27 Aligned_cols=181 Identities=12% Similarity=0.077 Sum_probs=114.5
Q ss_pred EEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHH-HHHHHHHHHhCCCccCcEEEEEEecC
Q 045882 300 KILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLK-LLAMEQLLKVHPELQGKLVLVQIVNP 378 (832)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~-l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (832)
.++|+|+|...+... .. ..++ ..-+++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~-~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g- 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF-GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG- 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc-CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC-
Confidence 568999997655321 00 1111 011467889999998888987664 4788777542 222 333432
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCC
Q 045882 379 ARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTP 458 (832)
Q Consensus 379 ~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~ 458 (832)
+++. +++ ++.+++.+ ...++.+. .. ++..+|+.||++|.+| | +.+++|||+|+.
T Consensus 218 ---~~~~-~~l----~~~~~~~~-------l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~--- 271 (348)
T TIGR01133 218 ---KNDL-EKV----KNVYQELG-------IEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAAGV--- 271 (348)
T ss_pred ---cchH-HHH----HHHHhhCC-------ceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHcCC---
Confidence 2221 233 33333321 12233333 22 7899999999999865 4 689999999954
Q ss_pred CchhhhhhhcCCCCCceEEeccCcccc-------ccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q 045882 459 KMDEAMELASVCPRTSMLVISEFIGCS-------PSL---SGAIRVNPWD--IDAVADALHDAITMSDVEKQLRHEKHYR 526 (832)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~s-------~~l---~~a~~VnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~ 526 (832)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.+.++ +++.++.+.++.++
T Consensus 272 ----------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 272 ----------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARK 334 (348)
T ss_pred ----------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHh
Confidence 57777665422 234 2488898876 9999999999996 45556666777788
Q ss_pred hhhcCCHHHHHH
Q 045882 527 YICSHDVAYWAH 538 (832)
Q Consensus 527 ~v~~~~~~~W~~ 538 (832)
++..+...++++
T Consensus 335 ~~~~~~~~~i~~ 346 (348)
T TIGR01133 335 LAKPDAAKRIAE 346 (348)
T ss_pred cCCccHHHHHHh
Confidence 887776666554
No 123
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.04 E-value=1.3e-08 Score=114.24 Aligned_cols=252 Identities=13% Similarity=0.140 Sum_probs=145.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH--hCCEEeecC
Q 045882 185 KVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL--NADLIGFHT 262 (832)
Q Consensus 185 ~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll--~~dligf~t 262 (832)
..|++ +++..+| |+|++|......+...+-.+..++|+...-+-. -+...+. |+.+++.+-+. .||++.-.+
T Consensus 76 ~~l~~-~l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEE-LLLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHH-HHHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 34444 3455577 999999655554544444444467776432211 0111111 22233323222 267766667
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcC--CCEEEEEe
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFK--GKKVIVGV 340 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~--~~~vil~V 340 (832)
....+++++ +|.+ ..+|.++++|+....+..... + ....+++++. +..+++..
T Consensus 150 ~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-~----~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-A----YSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-c----cchhHHHhcCCCCCEEEEec
Confidence 666666642 1322 235777888863222221111 0 1233445553 23444455
Q ss_pred cccc-ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 045882 341 DDMD-IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419 (832)
Q Consensus 341 dRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v 419 (832)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.+ +. ...|.++ +++
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~----~~--~~~v~~~-~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHL----GD--SKRVHLI-EPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHh----CC--CCCEEEE-CCC
Confidence 5653 45899999999999998888775 66655432 12 1122 22222 11 1235554 578
Q ss_pred CHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec-cCccccccC-CC-ceEeCC
Q 045882 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS-EFIGCSPSL-SG-AIRVNP 496 (832)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~s~~l-~~-a~~VnP 496 (832)
+..++..+|+.||+++.+| |.+..|||+|+. |+|.+ ..+|..+.+ .+ ++++ |
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-------------------PvI~~~~~~~~~e~~~~g~~~lv-~ 318 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-------------------PVLVLRDTTERPETVEAGTNKLV-G 318 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-------------------CEEECCCCCCChHHHhcCceEEe-C
Confidence 8999999999999998887 445799999954 56765 555555444 23 5566 6
Q ss_pred CCHHHHHHHHHHHhcCC
Q 045882 497 WDIDAVADALHDAITMS 513 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m~ 513 (832)
.|+++++++|.++++.+
T Consensus 319 ~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 319 TDKENITKAAKRLLTDP 335 (365)
T ss_pred CCHHHHHHHHHHHHhCh
Confidence 89999999999998743
No 124
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.02 E-value=1.9e-08 Score=114.12 Aligned_cols=271 Identities=9% Similarity=0.062 Sum_probs=153.6
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHH
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYAR 267 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~ 267 (832)
..++++..+| |+|.++ +....+..+.+++..++|+. +.++-+-.... ++ --.+|.+-..+....+
T Consensus 96 l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~~~~---------w~--~~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 96 LINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRLHKN---------WI--TPYSTRYYVATKETKQ 160 (391)
T ss_pred HHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCcccc---------cc--cCCCCEEEECCHHHHH
Confidence 4455566788 888886 22223333333344466764 34444411100 01 1247887776655444
Q ss_pred HHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc---CC-CEEEEEeccc
Q 045882 268 HFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF---KG-KKVIVGVDDM 343 (832)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~vil~VdRl 343 (832)
.+.+ .|++ ..+|.+.++.|+. .|... .+ ..++++++ ++ +.++++.||+
T Consensus 161 ~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~---~~----~~~~~~~~~l~~~~~~ilv~~G~l 212 (391)
T PRK13608 161 DFID-----VGID---------------PSTVKVTGIPIDN-KFETP---ID----QKQWLIDNNLDPDKQTILMSAGAF 212 (391)
T ss_pred HHHH-----cCCC---------------HHHEEEECeecCh-Hhccc---cc----HHHHHHHcCCCCCCCEEEEECCCc
Confidence 4432 1221 1133344555553 33311 11 12334444 23 4566789999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHH
Q 045882 344 DIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHE 423 (832)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~e 423 (832)
...||+..+++++ ++..|+++ ++.+++ ..+ ++.+++.+. .+. . ..|.++ +.+ ++
T Consensus 213 g~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v~~~-G~~--~~ 266 (391)
T PRK13608 213 GVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENVLIL-GYT--KH 266 (391)
T ss_pred ccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCeEEE-ecc--ch
Confidence 9999999999885 34456554 665652 222 122333222 211 1 125443 444 57
Q ss_pred HHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC------CCceEeCCC
Q 045882 424 KTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL------SGAIRVNPW 497 (832)
Q Consensus 424 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l------~~a~~VnP~ 497 (832)
+..+|++||++|.. +.|++..|||+|+. |+|++...+..+.. ..|.-+.+.
T Consensus 267 ~~~~~~~aDl~I~k----~gg~tl~EA~a~G~-------------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~~ 323 (391)
T PRK13608 267 MNEWMASSQLMITK----PGGITISEGLARCI-------------------PMIFLNPAPGQELENALYFEEKGFGKIAD 323 (391)
T ss_pred HHHHHHhhhEEEeC----CchHHHHHHHHhCC-------------------CEEECCCCCCcchhHHHHHHhCCcEEEeC
Confidence 99999999999863 45889999999955 57776433222211 223333366
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 045882 498 DIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (832)
|.++++++|.+.++. ++.+..+.++.++....++....++.+++.+...++.+
T Consensus 324 ~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 999999999999974 45555666677777778888888888877776554433
No 125
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.01 E-value=1.2e-09 Score=107.15 Aligned_cols=72 Identities=21% Similarity=0.225 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cccccceEeCCh--hH-
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPSKARYYLDDE--ED- 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s~A~y~l~~~--~e- 819 (832)
+|..+++.+++++ |++++.++++||+.||++|++.++.+ |+|..+. .+..|+|++++. ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~------------~~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS------------VAVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe------------EecCCcCHHHHHhCCEEecCCCCCcH
Confidence 4888999999998 99999999999999999999999864 4554443 256789998754 33
Q ss_pred HHHHHHHhhhhc
Q 045882 820 VLALLKGLAAAS 831 (832)
Q Consensus 820 V~~~L~~l~~~~ 831 (832)
+.++++.+..+.
T Consensus 141 ~~~~~~~~~~~~ 152 (154)
T TIGR01670 141 VREVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHHHhh
Confidence 889999887653
No 126
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.98 E-value=2.5e-08 Score=111.42 Aligned_cols=252 Identities=13% Similarity=0.035 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecC--CCCChhhhhcCCchHHHHHHHHhCCEEeec
Q 045882 184 NKVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHS--PFPSSEIYRTLPVRNEILKALLNADLIGFH 261 (832)
Q Consensus 184 N~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~--PfP~~e~~r~lp~r~~il~~ll~~dligf~ 261 (832)
...+.+.+.+. +| |+|++|++....++..+..+..++|+..+.|- .|- +..|+...-..-.-.+|++..-
T Consensus 77 ~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~~ad~~~~~ 148 (363)
T cd03786 77 LIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAIDKLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHHHHhhhccCC
Confidence 33444444444 77 89999988776676666555557887765441 110 0012111000011135655544
Q ss_pred ChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCC-CchHHHhhcCCCChHHHHHHHHHHc---CCCEEE
Q 045882 262 TFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGI-HMGRLESALNHPSSSIKVKEIREQF---KGKKVI 337 (832)
Q Consensus 262 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vi 337 (832)
+....+++.+ .|+ ...+|.++|+++ |...+..... +. ...++.+ .++.++
T Consensus 149 s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~~-----~~~~~~~~~~~~~~vl 202 (363)
T cd03786 149 TEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-KK-----ELILELLGLLPKKYIL 202 (363)
T ss_pred CHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-cc-----chhhhhcccCCCCEEE
Confidence 4444333321 121 223566677774 5443332111 00 1111222 345678
Q ss_pred EEeccccc---cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 045882 338 VGVDDMDI---FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVIL 414 (832)
Q Consensus 338 l~VdRld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~ 414 (832)
+.++|+.. .||+..+++|++++.+. ++.++..+.+ +..+ ++++.+.+.+.. -..|.+
T Consensus 203 v~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~~-----~~~~----~l~~~~~~~~~~-----~~~v~~ 262 (363)
T cd03786 203 VTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNHP-----RTRP----RIREAGLEFLGH-----HPNVLL 262 (363)
T ss_pred EEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECCC-----ChHH----HHHHHHHhhccC-----CCCEEE
Confidence 89999875 79999999999887542 2335544422 2222 333333333210 012444
Q ss_pred ecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CCceE
Q 045882 415 IDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SGAIR 493 (832)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~a~~ 493 (832)
.+.....++..+|+.||++|.+|- | +..|+++|+. |+|++...+..+.+ ..|+.
T Consensus 263 -~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-------------------PvI~~~~~~~~~~~~~~g~~ 317 (363)
T cd03786 263 -ISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-------------------PVLNLRDRTERPETVESGTN 317 (363)
T ss_pred -ECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-------------------CEEeeCCCCccchhhheeeE
Confidence 445678899999999999999984 4 4689999854 57777655544444 44544
Q ss_pred eCC-CCHHHHHHHHHHHhcCCH
Q 045882 494 VNP-WDIDAVADALHDAITMSD 514 (832)
Q Consensus 494 VnP-~d~~~~A~ai~~aL~m~~ 514 (832)
+.+ .|.++++++|.++++.+.
T Consensus 318 ~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 318 VLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EecCCCHHHHHHHHHHHhcCch
Confidence 433 379999999999998553
No 127
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.94 E-value=2.7e-09 Score=107.86 Aligned_cols=124 Identities=19% Similarity=0.237 Sum_probs=88.4
Q ss_pred cCcEEEEEecCCCcCCCC----CCCCCCCHHHH---HHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEE
Q 045882 577 TSRRAIFLDYDGTVVPHH----ALIKKPSRDVI---YVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYY 649 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~----~~~~~~s~~~~---~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~ 649 (832)
...|+|++|+||||++.. ......+.... .+++.| +++|+.++|+|||+...+.+.++.++-..+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------- 90 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTLGITHL------- 90 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHcCCcee-------
Confidence 358999999999999731 01223333333 677888 568999999999999888877765420000
Q ss_pred EEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEE
Q 045882 650 LRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVV 729 (832)
Q Consensus 650 i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~ 729 (832)
+ .|
T Consensus 91 --------f--------------------------~g------------------------------------------- 93 (183)
T PRK09484 91 --------Y--------------------------QG------------------------------------------- 93 (183)
T ss_pred --------e--------------------------cC-------------------------------------------
Confidence 0 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---
Q 045882 730 VKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--- 806 (832)
Q Consensus 730 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--- 806 (832)
.-+|..+++.+++.+ |++++++++|||+.||++|++.++.. +.+++.
T Consensus 94 -------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~~ 143 (183)
T PRK09484 94 -------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPL 143 (183)
T ss_pred -------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhHH
Confidence 013567889999998 99999999999999999999999853 334543
Q ss_pred -ccccceEeC
Q 045882 807 -PSKARYYLD 815 (832)
Q Consensus 807 -~s~A~y~l~ 815 (832)
...|.|+++
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 356788885
No 128
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.90 E-value=2.2e-08 Score=97.83 Aligned_cols=197 Identities=18% Similarity=0.211 Sum_probs=137.1
Q ss_pred HhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC--CC-CceEEEeCCEE
Q 045882 573 AYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP--CE-NLGIAAEHGYY 649 (832)
Q Consensus 573 ~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--l~-~l~liaenGa~ 649 (832)
++++-..-|+.+|.||||++ ...+.++++.+.|++| .+.+.+.++-|-..+.+.+.++. +. .++..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l--r~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL--RKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH--hhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 55666778999999999999 6788999999999998 35899999999999988888854 22 57789999998
Q ss_pred EEeCCCccEEEcCcc--cchhHHHHHHHHHHHHHhc----CCceEEeecceeEEEEe--ccC-----------CCCCCch
Q 045882 650 LRWTKKSEWETSTVA--ADFEWKRITEPVMKLYTEA----TDGSYIEKKETALVWHY--QDA-----------APGFGSC 710 (832)
Q Consensus 650 i~~~~~~~w~~~~~~--~~~~w~~~v~~i~~~~~e~----~~gs~ie~k~~~l~~~~--~~a-----------d~~~~~~ 710 (832)
-+..+...-...+.. .+...++.+.-++.+..+- ..|.+||-+...+.... |++ |....
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~-- 157 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHK-- 157 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhh--
Confidence 877654321111100 0112234444445555442 24899998876665432 222 11111
Q ss_pred hHHHHHHHHHHHhcCCCEEEE-EcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHH
Q 045882 711 QAKELLDHLESVLANEPVVVK-RGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFES 782 (832)
Q Consensus 711 ~a~el~~~l~~~l~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~ 782 (832)
--+.+.+.|++.++.+++... -|.-.++|.|.|++|-.-++.|-+. ..+.+-.||| +.||.+.|.-
T Consensus 158 iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~d 228 (252)
T KOG3189|consen 158 IREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFAD 228 (252)
T ss_pred hHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeC
Confidence 123466777888888887655 4567899999999999988887543 3588999999 5699888754
No 129
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.90 E-value=1.8e-07 Score=110.46 Aligned_cols=181 Identities=12% Similarity=0.128 Sum_probs=116.1
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHH--hCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLK--VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
+..++..|.|+...||+.+++.+++++++ ++|+ ..+.+|..|.+...+.. -.++.+.+.+++++ ..|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 56689999999999999999999999986 5565 24667777754322211 12344455555442 0122 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcCccee-ccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIV-NAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL 488 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vv-tS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l 488 (832)
.|+++.+ .+..--..+|+.||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGEG 517 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCccccc
Confidence 4666653 445555578999999999 777 89988887777773 456666666655444
Q ss_pred ---CCceEeCC------------CCHHHHHHHHHHHh-c----CCH-----HHHHHHHHHHHhhhhcCCHHHHHHHHHHH
Q 045882 489 ---SGAIRVNP------------WDIDAVADALHDAI-T----MSD-----VEKQLRHEKHYRYICSHDVAYWAHSFMQD 543 (832)
Q Consensus 489 ---~~a~~VnP------------~d~~~~A~ai~~aL-~----m~~-----~e~~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (832)
.+|+.+.+ .|.+++-++|.+++ . -++ .-.+.+.+.|......+++.+-++.|.+.
T Consensus 518 ~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 518 YDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 24888875 88999999998877 2 111 11222222233333346777777766553
No 130
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.85 E-value=6.1e-08 Score=98.08 Aligned_cols=190 Identities=18% Similarity=0.230 Sum_probs=125.9
Q ss_pred HHHHHHhhccCCCeEEEEcCCChhhHHHHhc-C-C--CCceEEEeCCEEEEeCCCccEEEcCccc--chhHHHHHHHHHH
Q 045882 605 IYVLRELCGDSNNTTFIVSGRGKVSLGEWLA-P-C--ENLGIAAEHGYYLRWTKKSEWETSTVAA--DFEWKRITEPVMK 678 (832)
Q Consensus 605 ~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-l--~~l~liaenGa~i~~~~~~~w~~~~~~~--~~~w~~~v~~i~~ 678 (832)
.++|.+|. +.+.|.|+||-......+.+. . + ...++.++||...+..+...|...+... +...++.+..+++
T Consensus 2 ~~~L~~L~--~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKLR--KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHHH--TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 56788883 479999999999999998884 2 1 1468999999999999888886654211 1122344444444
Q ss_pred HHHh----cCCceEEeecceeEEEEe--ccCC-----------CCCCchhHHHHHHHHHHHhcCCCEEEE-EcCeEEEEE
Q 045882 679 LYTE----ATDGSYIEKKETALVWHY--QDAA-----------PGFGSCQAKELLDHLESVLANEPVVVK-RGYNIVEVK 740 (832)
Q Consensus 679 ~~~e----~~~gs~ie~k~~~l~~~~--~~ad-----------~~~~~~~a~el~~~l~~~l~~~~~~v~-~g~~~vEV~ 740 (832)
+..+ ..-|.+||.+...+.+.. |+|. ++... -+.+.+.|.+.+.++.+.+. -|...++|.
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~i--R~~~v~~L~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKI--REKLVEALKKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTH--HHHHHHHHHHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhH--HHHHHHHHHHHCCCCceEEecCCceEEccc
Confidence 4433 124899999999888764 2221 11110 12466677777777778765 467899999
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeC----ChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcccccceEeCC
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGD----DRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPSKARYYLDD 816 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GD----d~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s~A~y~l~~ 816 (832)
|+|++|..+++.|.+. ..+.+++||| +.||.++|...+. .+.+| .+
T Consensus 158 p~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~V-----------~~ 207 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHTV-----------TS 207 (220)
T ss_dssp ETT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SS
T ss_pred cCCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEEe-----------CC
Confidence 9999999999988543 2799999999 5799999987643 34444 45
Q ss_pred hhHHHHHHHHhh
Q 045882 817 EEDVLALLKGLA 828 (832)
Q Consensus 817 ~~eV~~~L~~l~ 828 (832)
+++-++.|++|.
T Consensus 208 p~DT~~~l~~l~ 219 (220)
T PF03332_consen 208 PEDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 777777777664
No 131
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.85 E-value=2.9e-08 Score=108.73 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeC--ChhH
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLD--DEED 819 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~--~~~e 819 (832)
..|+.+++.+++++ |++++++++|||+.||++|++.+|.+ +++ +++. +..|++.++ +-++
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGlg------------iA~-nAkp~Vk~~Ad~~i~~~~l~~ 310 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGLG------------IAY-HAKPKVNEQAQVTIRHADLMG 310 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCCe------------EEe-CCCHHHHhhCCEEecCcCHHH
Confidence 58999999999999 99999999999999999999999864 344 3321 578999996 4577
Q ss_pred HHHHHHH
Q 045882 820 VLALLKG 826 (832)
Q Consensus 820 V~~~L~~ 826 (832)
|+.+|..
T Consensus 311 ~l~~~~~ 317 (322)
T PRK11133 311 VLCILSG 317 (322)
T ss_pred HHHHhcc
Confidence 7777653
No 132
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.80 E-value=2.2e-07 Score=104.77 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=91.0
Q ss_pred HHHHHcC---CCEE-EEE-eccccccCC-HHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 045882 326 EIREQFK---GKKV-IVG-VDDMDIFKG-ISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKR 399 (832)
Q Consensus 326 ~l~~~~~---~~~v-il~-VdRld~~KG-i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~ 399 (832)
.++++++ ++++ ++. -+|....|+ +...++|++.+.+++|+++ +++++.+ ++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~~----~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLVN----PKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCC----hhhH----HHHHHHHhh
Confidence 3445552 4444 333 347766554 6889999999988888765 7766531 2222 233333332
Q ss_pred HhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec
Q 045882 400 INETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS 479 (832)
Q Consensus 400 iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (832)
.. + . .+.++. .++..+|++||++|.+| |.+.+|+|+|+. |+|++
T Consensus 243 ~~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-------------------PvI~~ 286 (380)
T PRK00025 243 YA---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-------------------PMVVG 286 (380)
T ss_pred cC---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-------------------CEEEE
Confidence 10 1 1 144433 37899999999999998 677789999955 46655
Q ss_pred -----------------cCccccccCCC-----ceEeCCCCHHHHHHHHHHHhcCC
Q 045882 480 -----------------EFIGCSPSLSG-----AIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 480 -----------------e~~G~s~~l~~-----a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+.|..+.+.+ +++++..|.+++++++.+.|+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 287 YKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred EccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 45555555532 36778889999999999999844
No 133
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.79 E-value=1.5e-08 Score=95.59 Aligned_cols=56 Identities=20% Similarity=0.230 Sum_probs=46.6
Q ss_pred EEEEecCCCcCCCCCC-----CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 581 AIFLDYDGTVVPHHAL-----IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~-----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+++||+||||.+..+. ...+.+.+.+.|++| ++.|+.++|+|||....+..+++.+
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~~ 61 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEEL 61 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHHc
Confidence 4899999999984321 127788999999999 5679999999999999999998764
No 134
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.77 E-value=1e-08 Score=97.56 Aligned_cols=128 Identities=20% Similarity=0.235 Sum_probs=89.2
Q ss_pred CEEEEEeccccccCCHHHHHH-HHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 334 KKVIVGVDDMDIFKGISLKLL-AMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 334 ~~vil~VdRld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
..++++.|++.+.||+..+++ |++++.+++|+++ |+.+|... + ++.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS------------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H------HHHHh-cC----------CCE
Confidence 467999999999999999999 9999999999765 88888532 2 12222 00 136
Q ss_pred EEecCCCCHHHHHHHHHhcCcceeccc-ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC--
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAV-RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-- 489 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-- 489 (832)
.+.+ .+ +|+.++|+.||+++.|+. .+|++...+|||+++ .|+|+|.. |+...+.
T Consensus 56 ~~~g-~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G-------------------~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 56 RFHG-FV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG-------------------KPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---------------------EEEEHH-HCHCHS---
T ss_pred EEcC-CH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC-------------------CCEEECCc-chhhheeec
Confidence 5544 55 689999999999999984 789999999999994 46888888 6666652
Q ss_pred -CceEeCCCCHHHHHHHHHHHhc
Q 045882 490 -GAIRVNPWDIDAVADALHDAIT 511 (832)
Q Consensus 490 -~a~~VnP~d~~~~A~ai~~aL~ 511 (832)
.++.+ +.|.++++++|.++++
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8999999999999874
No 135
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.72 E-value=3.2e-07 Score=96.98 Aligned_cols=182 Identities=9% Similarity=0.139 Sum_probs=132.3
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCC--ccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPE--LQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
....+|+++.+-|.|+.. .|+-+...+.++|. .-.++.|+++|. .|+ ++.++.-..++.++++++..-
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~~L~i~~------ 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAEELKIPK------ 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHHhcCCcc------
Confidence 457899999999999999 77777788888887 334677887763 343 333455556677777765431
Q ss_pred cEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-- 488 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-- 488 (832)
.|.| .-.+|.+++..+|..|-+.|-+-..|-||+.+.||||++. .+|+-.-+|..-.+
T Consensus 338 ~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-------------------Ipi~h~SgGP~lDIV~ 397 (465)
T KOG1387|consen 338 HVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-------------------IPIVHNSGGPLLDIVT 397 (465)
T ss_pred ceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-------------------eEEEeCCCCCceeeee
Confidence 2444 5589999999999999999999999999999999999843 23333333321111
Q ss_pred --C---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHH
Q 045882 489 --S---GAIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 489 --~---~a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (832)
. .|++. | +.++.||++.+++++..+||....+..|..+.++.-+..-+.|...+..
T Consensus 398 ~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 398 PWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred ccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 36665 3 5788999999999999999887777777777777766666666654443
No 136
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.71 E-value=5.3e-08 Score=96.77 Aligned_cols=138 Identities=16% Similarity=0.094 Sum_probs=95.3
Q ss_pred CcEEEEEecCCCcCCCCC---C----CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEE
Q 045882 578 SRRAIFLDYDGTVVPHHA---L----IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYL 650 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~---~----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i 650 (832)
..|+++||+||||++-.- . .+..+..-...++.| ++.|..++|+|+++...+...+..++-.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~lgi~---------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEELKIK---------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHCCCc----------
Confidence 379999999999997210 0 123455666788888 6789999999999888888777654200
Q ss_pred EeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEE
Q 045882 651 RWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVV 730 (832)
Q Consensus 651 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v 730 (832)
.| +. +
T Consensus 75 ------~~---f~----------------------~-------------------------------------------- 79 (169)
T TIGR02726 75 ------RF---HE----------------------G-------------------------------------------- 79 (169)
T ss_pred ------EE---Ee----------------------c--------------------------------------------
Confidence 00 00 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--ccc
Q 045882 731 KRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPS 808 (832)
Q Consensus 731 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s 808 (832)
+ -.|-..++.+++++ |++++++++|||+.||++|++.++.+ |++..+. .+.
T Consensus 80 --------~----kpkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~------------~am~nA~~~lk~ 132 (169)
T TIGR02726 80 --------I----KKKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLA------------VAVGDAVADVKE 132 (169)
T ss_pred --------C----CCCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCe------------EECcCchHHHHH
Confidence 0 14556788888888 99999999999999999999999864 4444443 267
Q ss_pred ccceEeCC--hhH-HHHHHHHhh
Q 045882 809 KARYYLDD--EED-VLALLKGLA 828 (832)
Q Consensus 809 ~A~y~l~~--~~e-V~~~L~~l~ 828 (832)
.|+|++.. .++ |..+++.+.
T Consensus 133 ~A~~I~~~~~~~g~v~e~~e~il 155 (169)
T TIGR02726 133 AAAYVTTARGGHGAVREVAELIL 155 (169)
T ss_pred hCCEEcCCCCCCCHHHHHHHHHH
Confidence 88998742 333 455555444
No 137
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.66 E-value=7.8e-07 Score=98.70 Aligned_cols=252 Identities=12% Similarity=0.033 Sum_probs=140.8
Q ss_pred HHHHhCCCCCEEEEeCccccc--HHH-HHHh-hcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhH
Q 045882 191 IMEVINPEEDYVWIHDYHLMV--LPT-FLRR-RFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYA 266 (832)
Q Consensus 191 v~~~~~~~~d~vwvhDyhl~l--lp~-~lr~-~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~ 266 (832)
++..++++ |+|++|..-+.. ++. ++++ +..++|+++++|--+|..-.. .-.......+.+-.||.|..++....
T Consensus 58 ~~~~~~~~-Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~-~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPG-DIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS-NYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCC-CEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc-cchhhHHHHHHHHhCCEEEECCHHHH
Confidence 44556774 999999753321 222 2222 112699999999766632110 00112233455667899999888766
Q ss_pred HHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecccccc
Q 045882 267 RHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIF 346 (832)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~ 346 (832)
+.+.+ .|+. ..++.+.|+..+..... + +....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~-----~---------~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE-----L---------VKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc-----c---------cccccCCceEEEecChhhc
Confidence 55532 1221 11222333332221000 0 0112345689999999943
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
.++ .+..|+++ |+++|.+ ++.. . ....|.| .+.++.+|+..
T Consensus 182 ~~l----------~~~~~~~~----l~i~G~g-----~~~~-----------~--------~~~~V~f-~G~~~~eel~~ 222 (333)
T PRK09814 182 PFL----------KNWSQGIK----LTVFGPN-----PEDL-----------E--------NSANISY-KGWFDPEELPN 222 (333)
T ss_pred hHH----------HhcCCCCe----EEEECCC-----cccc-----------c--------cCCCeEE-ecCCCHHHHHH
Confidence 321 11345543 7777743 2211 0 0112544 56899999999
Q ss_pred HHHhcCcceecccc-----------cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC---Cce
Q 045882 427 YYALAECCIVNAVR-----------DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS---GAI 492 (832)
Q Consensus 427 ly~~ADv~vvtS~~-----------EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~---~a~ 492 (832)
+|+. |+.+++.-. -.++--..|||||+ -|+|++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-------------------~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-------------------LPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-------------------CCEEECCCccHHHHHHhCCceE
Confidence 9988 666654321 12333467789994 4699999999888882 388
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 493 RVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
+|+ +.++++++|... ++++++++.++.++...........+.-+.
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~~~~ 327 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKKALV 327 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 887 688899998873 456655555555555444333333443333
No 138
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.66 E-value=1.6e-06 Score=101.11 Aligned_cols=237 Identities=15% Similarity=0.073 Sum_probs=155.3
Q ss_pred CCCEEE--EeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCc--hHHHHHHHHhCCEEeecChhhHHHHHHHH
Q 045882 198 EEDYVW--IHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPV--RNEILKALLNADLIGFHTFDYARHFLSCC 273 (832)
Q Consensus 198 ~~d~vw--vhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~--r~~il~~ll~~dligf~t~~~~~~Fl~~~ 273 (832)
++|++. ++.-|... +....|..++.+..|+ -+. |. -+..+..+-.+|.+...|.+-.+......
T Consensus 224 ~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~~~ 291 (519)
T TIGR03713 224 DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYESLSRADLIIVDREDIERLLEENY 291 (519)
T ss_pred CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhChhhcCeEEEcCHHHHHHHHHHh
Confidence 358777 77777766 4444454445556665 111 22 24566667778877766654443332111
Q ss_pred HHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEeccccccCCHHHHH
Q 045882 274 SRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDDMDIFKGISLKL 353 (832)
Q Consensus 274 ~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdRld~~KGi~~~l 353 (832)
.. .. ....|..+|++.= +.. + ...++..++.|.+++||+ +.|-+...|
T Consensus 292 ~~----------------~~-~~~~v~~Ip~~~~--~~~-----~-------~~s~r~~~~~I~v~idrL-~ek~~~~~I 339 (519)
T TIGR03713 292 RE----------------NY-VEFDISRITPFDT--RLR-----L-------GQSQQLYETEIGFWIDGL-SDEELQQIL 339 (519)
T ss_pred hh----------------cc-cCCcceeeCccce--EEe-----c-------ChhhcccceEEEEEcCCC-ChHHHHHHH
Confidence 00 00 1123334565533 111 0 112333567788888899 999999999
Q ss_pred HHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc---------------------c-c
Q 045882 354 LAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY---------------------E-P 411 (832)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~---------------------~-p 411 (832)
+|+.++++++|+.. |...|... . .++.+.++++++++|..++.... . .
T Consensus 340 ~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (519)
T TIGR03713 340 QQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKE 409 (519)
T ss_pred HHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhccccc
Confidence 99999999999977 77776331 1 23456777777777776432110 0 2
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--- 488 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--- 488 (832)
.+.+.+..+..++.+.|.-|.++|.+|..|||+ +.+|||+.|. |.| .-|.++.+
T Consensus 410 ~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------------PqI---nyg~~~~V~d~ 466 (519)
T TIGR03713 410 RIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------------PQI---NKVETDYVEHN 466 (519)
T ss_pred EEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC-------------------Cee---ecCCceeeEcC
Confidence 455666777779999999999999999999999 9999999733 344 55667777
Q ss_pred CCceEeCCCCHHHHHHHHHHHhcCC
Q 045882 489 SGAIRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 489 ~~a~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+|.+| .|+.++++||...|+.+
T Consensus 467 ~NG~li--~d~~~l~~al~~~L~~~ 489 (519)
T TIGR03713 467 KNGYII--DDISELLKALDYYLDNL 489 (519)
T ss_pred CCcEEe--CCHHHHHHHHHHHHhCH
Confidence 369999 79999999999999854
No 139
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.54 E-value=4.2e-06 Score=100.92 Aligned_cols=181 Identities=10% Similarity=0.077 Sum_probs=114.1
Q ss_pred EEEEEeccccccCCHHHHHHHHHHHHH--hCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 335 KVIVGVDDMDIFKGISLKLLAMEQLLK--VHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 335 ~vil~VdRld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
.+|.++.|+..-||..+++..+++|++ .+|+ ..+.+|..|.+.-.+.. -.++.+++.+++++ -+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC--C--cE
Confidence 379999999999999999999999865 3444 35777777754322211 12344444444431 0222 1 47
Q ss_pred EEecCCCCHHHHHHHHHhcCcceeccc--ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAV--RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-- 488 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~--~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-- 488 (832)
+|+.+ .+..--..+++.|||++.||. .|.-|+.-+-|+. .|.|-+|-.=|.-.+-
T Consensus 550 vfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~~ 608 (778)
T cd04299 550 VFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGYD 608 (778)
T ss_pred EEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCccccccC
Confidence 77664 555555589999999999998 7877777666666 3678888887766655
Q ss_pred -CCceEeCC------------CCHHHHHHHHHHHhc----------CCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHH
Q 045882 489 -SGAIRVNP------------WDIDAVADALHDAIT----------MSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDLE 545 (832)
Q Consensus 489 -~~a~~VnP------------~d~~~~A~ai~~aL~----------m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (832)
.+|+.+.+ .|.+++-+.|.+++- .|..-.+.+.+.+....-.+++.+.++.|++.+-
T Consensus 609 g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 609 GENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 24888877 455556666654443 1222222222333444445777777777777665
No 140
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.46 E-value=2.7e-07 Score=90.79 Aligned_cols=70 Identities=11% Similarity=0.137 Sum_probs=55.0
Q ss_pred EEEEecCCCcCCCCC--------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHH---HHhcC-------CCCceE
Q 045882 581 AIFLDYDGTVVPHHA--------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG---EWLAP-------CENLGI 642 (832)
Q Consensus 581 lI~lD~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-------l~~l~l 642 (832)
++++|+||||+.... ....+++.+.++++++ +++|+.|+++|||+..... +|+.. +|..++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 589999999998320 0157899999999999 6889999999999988774 77765 333467
Q ss_pred EEeCCEEEE
Q 045882 643 AAEHGYYLR 651 (832)
Q Consensus 643 iaenGa~i~ 651 (832)
++.||+.+.
T Consensus 80 i~~~g~~~~ 88 (157)
T smart00775 80 LLSPDRLFA 88 (157)
T ss_pred EEcCCcchh
Confidence 888887764
No 141
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.36 E-value=7.2e-07 Score=84.71 Aligned_cols=56 Identities=25% Similarity=0.301 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeC
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLD 815 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~ 815 (832)
+|-.+.+.|++.+ ++.++++.++|||.||+++|+.+|.+ |+++-+.. ...|.|++.
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls------------~a~~dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS------------VAVADAHPLLKQRADYVTS 140 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc------------ccccccCHHHHHhhHhhhh
Confidence 5888899999999 99999999999999999999999865 45554443 577888884
No 142
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.31 E-value=1.1e-05 Score=92.67 Aligned_cols=102 Identities=10% Similarity=0.102 Sum_probs=64.1
Q ss_pred HHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC--------CCceE
Q 045882 422 HEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL--------SGAIR 493 (832)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l--------~~a~~ 493 (832)
-++..+.+.+|++|+||.+|..|.+|+|++|. +.|-|.|..+|....+ ..|+.
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhccCcCCcEE
Confidence 36778899999999999999999999999998 4578999999976433 12443
Q ss_pred -eCCC--CH----HHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 494 -VNPW--DI----DAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 494 -VnP~--d~----~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
|+-. |. +++|+.|.....|+..+|.....+..+.-..-++.+....|.+
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4322 23 5677777777788888776655555444444555554444433
No 143
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.30 E-value=5.8e-06 Score=85.82 Aligned_cols=62 Identities=26% Similarity=0.371 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCCh--hH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDDE--ED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~~--~e 819 (832)
.|...++.+++.+ +++++++++|||+.+|+++.+.+|.. +.++.. +..|+|++.+. .+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 5889999999988 89999999999999999999999863 334432 46789998644 55
Q ss_pred HHHH
Q 045882 820 VLAL 823 (832)
Q Consensus 820 V~~~ 823 (832)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5544
No 144
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.30 E-value=1.5e-05 Score=85.03 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=41.1
Q ss_pred EEEEEecCCCcCCCCCCCC---CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHH
Q 045882 580 RAIFLDYDGTVVPHHALIK---KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGE 632 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~---~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 632 (832)
|+|+||+||||+. .+. .+.+.+.++|++| ++.|..++++|||+......
T Consensus 2 k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l-~~~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRL-RGASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHH-HHCCCeEEEEECCCCCCHHH
Confidence 6899999999998 333 3778999999999 68899999999988776433
No 145
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.30 E-value=6.4e-06 Score=87.53 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=52.1
Q ss_pred EEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC---CChhhHHHHhcCCC----CceEEEeCCEEE
Q 045882 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG---RGKVSLGEWLAPCE----NLGIAAEHGYYL 650 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~----~l~liaenGa~i 650 (832)
|+|++|+||||+. .+..+ +.+.++|++| ++.|+.|+++|| |+...+.+.+..++ ...+++.+|+..
T Consensus 2 ~~~~~D~DGtl~~---~~~~i-~~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~ 74 (249)
T TIGR01457 2 KGYLIDLDGTMYK---GKERI-PEAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATA 74 (249)
T ss_pred CEEEEeCCCceEc---CCeeC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHH
Confidence 6899999999998 44444 4789999999 688999999995 88998888887653 233777777643
No 146
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.28 E-value=5.1e-06 Score=85.88 Aligned_cols=45 Identities=18% Similarity=0.198 Sum_probs=39.7
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
..-.+-.|..+++.+++.+ |++++.++++|||.||.+||+.+++.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 138 PICDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred eecCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 3344557999999999998 99999999999999999999999963
No 147
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.25 E-value=0.00042 Score=76.78 Aligned_cols=300 Identities=20% Similarity=0.263 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcc----cccHHHH--HHhhcCCCeEEEEecCC---------CCChhhhhcCCch
Q 045882 181 VSANKVFADKIMEVINPEEDYVWIHDYH----LMVLPTF--LRRRFHRVKLGFFLHSP---------FPSSEIYRTLPVR 245 (832)
Q Consensus 181 ~~vN~~fa~~v~~~~~~~~d~vwvhDyh----l~llp~~--lr~~~~~~~ig~flH~P---------fP~~e~~r~lp~r 245 (832)
.+.+++|+ .......|++..||+|-=- ..++|-. ||+++|+.++..+.-+| |+..-..+-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 45677776 1123445667899998554 3445544 89999999998887665 2222222334532
Q ss_pred H-HHHHHHH---hCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeE---------------------EEEE
Q 045882 246 N-EILKALL---NADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRT---------------------IYVK 300 (832)
Q Consensus 246 ~-~il~~ll---~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~---------------------~~i~ 300 (832)
. -.++..| ..|+..|.--+.=-|++..|.+. |+. .+-.++|- +..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 2 1223222 34555555444444555444321 111 01111110 0011
Q ss_pred EeecCCCchHHHhh---------------cCCCChHHHHHHHHHHcCC-CEEEEEeccccccCCHHHHHHHHHHHHHhCC
Q 045882 301 ILHVGIHMGRLESA---------------LNHPSSSIKVKEIREQFKG-KKVIVGVDDMDIFKGISLKLLAMEQLLKVHP 364 (832)
Q Consensus 301 i~P~GId~~~~~~~---------------~~~~~~~~~~~~l~~~~~~-~~vil~VdRld~~KGi~~~l~A~~~ll~~~P 364 (832)
+.-.-+|-++|.+. ...|........+|.++++ +++++..+- ...--...+.|+..|++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCC
Confidence 11112222233221 1223445667788888877 899999887 22333347889999999999
Q ss_pred CccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCC-------CcccEEEecCCCCHHHHHHHHHhcCcceec
Q 045882 365 ELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVP-------GYEPVILIDRPVPLHEKTAYYALAECCIVN 437 (832)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~-------~~~pv~~~~~~v~~~el~aly~~ADv~vvt 437 (832)
+.. ||.| | +.|+ =-..+++++++.|-+++.- ..++|++.+. .-|+..||++||+++|-
T Consensus 260 ~~l----lIlV--P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dt---mGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LILV--P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDT---MGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EEEe--c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEec---HhHHHHHHhhccEEEEC
Confidence 864 4433 2 3343 3457888888888777531 2235655443 77999999999998775
Q ss_pred cc---ccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccC----ccccccC--C-CceEeCCCCHHHHHHHHH
Q 045882 438 AV---RDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEF----IGCSPSL--S-GAIRVNPWDIDAVADALH 507 (832)
Q Consensus 438 S~---~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~s~~l--~-~a~~VnP~d~~~~A~ai~ 507 (832)
-. .-|-| ++|+.+++. |+|.-.+ .-+.+.| . +++.|+. .+.+++++.
T Consensus 325 GSlv~~GGHN--~LEpa~~~~-------------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~ 381 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAFGT-------------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVE 381 (419)
T ss_pred CcccCCCCCC--hhhHHHcCC-------------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHH
Confidence 43 34555 569999843 4554433 3334444 2 3666764 777887777
Q ss_pred HHhcCCHHHHHHHHHHHHhhhhcC
Q 045882 508 DAITMSDVEKQLRHEKHYRYICSH 531 (832)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v~~~ 531 (832)
..++. +++|+++.++....+.++
T Consensus 382 ~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 382 LLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HhcCC-HHHHHHHHHHHHHHHHHh
Confidence 77764 777777777777777665
No 148
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.21 E-value=3.9e-06 Score=83.80 Aligned_cols=41 Identities=27% Similarity=0.390 Sum_probs=36.8
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a 783 (832)
.+.+.+|+.+++.+++.+ |++++.++++||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366889999999999887 88999999999999999999864
No 149
>PRK10444 UMP phosphatase; Provisional
Probab=98.18 E-value=3.8e-05 Score=81.46 Aligned_cols=54 Identities=9% Similarity=0.052 Sum_probs=45.7
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+|+++||+||||+. .+ .+.+.+.++|++| ++.|..++++|+|+........+.+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 47899999999998 33 6788999999999 6889999999999998776665554
No 150
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.12 E-value=0.00021 Score=80.96 Aligned_cols=134 Identities=16% Similarity=0.123 Sum_probs=82.9
Q ss_pred CCEEE--EEeccccc-cCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCc
Q 045882 333 GKKVI--VGVDDMDI-FKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGY 409 (832)
Q Consensus 333 ~~~vi--l~VdRld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~ 409 (832)
++++| ++.+|..+ .|++..+++|++.+.+++|+++ ++.++.+. ...+ .++++.++. +. +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~----~~~~~~~~~----~~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRL----QFEQIKAEY----GP-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHH----HHHHHHHHh----CC-C-
Confidence 45544 34569887 7999999999999999999876 54443221 1111 222222222 21 1
Q ss_pred ccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEec----------
Q 045882 410 EPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVIS---------- 479 (832)
Q Consensus 410 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~S---------- 479 (832)
..+.++.+ +...+|++||++|.+| |.+.+|+++|+.| +|++
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P-------------------~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP-------------------MVVGYRMKPLTFLI 302 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC-------------------EEEEEcCCHHHHHH
Confidence 13444433 3457999999999999 5666799999764 3333
Q ss_pred -------cCccccccCCC-c----eEeCCCCHHHHHHHHHHHhcCC
Q 045882 480 -------EFIGCSPSLSG-A----IRVNPWDIDAVADALHDAITMS 513 (832)
Q Consensus 480 -------e~~G~s~~l~~-a----~~VnP~d~~~~A~ai~~aL~m~ 513 (832)
.+.+.+..+.+ + ++-.-.+++.+++++.+.|+.+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333422 1 2223346789999999999865
No 151
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.07 E-value=4.4e-05 Score=82.53 Aligned_cols=51 Identities=16% Similarity=0.215 Sum_probs=40.1
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
.++|+||+||||+. .. .+-+.+.++|++| +++|..++++|+|+.......+
T Consensus 2 ~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~ 52 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GE-RVVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYA 52 (279)
T ss_pred ccEEEEeCCCceEc---CC-eeCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHH
Confidence 47899999999998 33 3445689999999 6889999999998765444433
No 152
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.05 E-value=6.1e-05 Score=76.79 Aligned_cols=38 Identities=26% Similarity=0.367 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+|+.+++.+++.+ |+++++++++||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5999999999988 8999999999999999999999985
No 153
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.01 E-value=7.9e-06 Score=76.84 Aligned_cols=51 Identities=22% Similarity=0.206 Sum_probs=41.3
Q ss_pred EEEEEecCCCcCCCCC---CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHH
Q 045882 580 RAIFLDYDGTVVPHHA---LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG 631 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~---~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 631 (832)
|+|++|+||||+.... ....+.++++++|++| +++|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 6999999999987321 1134779999999999 5789999999999987654
No 154
>PLN02954 phosphoserine phosphatase
Probab=98.00 E-value=7.8e-05 Score=77.65 Aligned_cols=66 Identities=17% Similarity=0.278 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeC
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLD 815 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~ 815 (832)
.+.+|..+++.+++.+ |. +.+++|||+.||+.|.+.++.. +.++.|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 4456889999988876 54 6899999999999996665432 34444531 235889999
Q ss_pred ChhHHHHHH
Q 045882 816 DEEDVLALL 824 (832)
Q Consensus 816 ~~~eV~~~L 824 (832)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 998887764
No 155
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.97 E-value=1.5e-05 Score=84.54 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=58.5
Q ss_pred CcEEEEEecCCCcCCCCCCCCCC---CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC---ceEEEeCCEEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKP---SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN---LGIAAEHGYYLR 651 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~---l~liaenGa~i~ 651 (832)
..++|+||+||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|++++..+...++.++- ...|..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 468999999999999 45444 69999999999 788999999999999988888887642 246777887765
Q ss_pred eC
Q 045882 652 WT 653 (832)
Q Consensus 652 ~~ 653 (832)
..
T Consensus 201 ~k 202 (301)
T TIGR01684 201 EY 202 (301)
T ss_pred CC
Confidence 43
No 156
>PLN02645 phosphoglycolate phosphatase
Probab=97.96 E-value=8.5e-05 Score=81.61 Aligned_cols=54 Identities=19% Similarity=0.127 Sum_probs=43.7
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
+.++|+||+||||+. .+ .+-+.+.++|++| ++.|..++++|+|+.......+..
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~ 80 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKK 80 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHH
Confidence 468999999999998 34 4557889999999 688999999999996665555533
No 157
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.84 E-value=3.3e-05 Score=68.56 Aligned_cols=87 Identities=15% Similarity=0.219 Sum_probs=69.2
Q ss_pred cceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-C--ceEeCCCCHHHHHHHHHHH
Q 045882 433 CCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-G--AIRVNPWDIDAVADALHDA 509 (832)
Q Consensus 433 v~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~--a~~VnP~d~~~~A~ai~~a 509 (832)
+++.|+..+|+++..+|+||| ++++|.+...+..+.+. + ++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 45677776778887773 3 67777 999999999999
Q ss_pred hcCCHHHHHHHHHHHHhhhh-cCCHHHHHHHHH
Q 045882 510 ITMSDVEKQLRHEKHYRYIC-SHDVAYWAHSFM 541 (832)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~~l 541 (832)
++ .+++++...++.+++|. .|+...-++.|+
T Consensus 60 l~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99 55677777777888887 688777777665
No 158
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.82 E-value=0.00022 Score=76.84 Aligned_cols=71 Identities=24% Similarity=0.205 Sum_probs=56.6
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--c----ccccceEe
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--K----PSKARYYL 814 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~----~s~A~y~l 814 (832)
+.+-.|...++.+++.+ |+.++.+++|||+.+|+.+.+.+|.. +++|..|. . ...|.|.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 44556777899999998 99999999999999999999999863 25666663 1 24688999
Q ss_pred CChhHHHHHHH
Q 045882 815 DDEEDVLALLK 825 (832)
Q Consensus 815 ~~~~eV~~~L~ 825 (832)
++..++..++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999887655
No 159
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.81 E-value=0.00029 Score=73.28 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~ 816 (832)
+..|..+++.+ +..++.+++|||+.||+.|.+.++.. |+ -+. ....+.+.+++
T Consensus 146 ~~~K~~~l~~~-------~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 146 GCCKPSLIRKL-------SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred CCchHHHHHHh-------ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCC
Confidence 34687766554 66778999999999999999998752 22 121 12335556788
Q ss_pred hhHHHHHHHHhhh
Q 045882 817 EEDVLALLKGLAA 829 (832)
Q Consensus 817 ~~eV~~~L~~l~~ 829 (832)
-.+|...|+.+-+
T Consensus 205 f~ei~~~l~~~~~ 217 (219)
T PRK09552 205 FHDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHHhc
Confidence 9999998887754
No 160
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.77 E-value=0.00056 Score=73.69 Aligned_cols=70 Identities=21% Similarity=0.320 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~ 818 (832)
.|..++..+++++ ++.++++++|||+.+|+.+-+.+|.. +++|.-|.. ...|.|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4678888899888 89999999999999999999999863 356666632 346899999999
Q ss_pred HHHHHHHHhh
Q 045882 819 DVLALLKGLA 828 (832)
Q Consensus 819 eV~~~L~~l~ 828 (832)
++..++.+|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999888775
No 161
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.75 E-value=0.00022 Score=81.57 Aligned_cols=132 Identities=9% Similarity=0.136 Sum_probs=95.6
Q ss_pred cCCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcc
Q 045882 331 FKGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYE 410 (832)
Q Consensus 331 ~~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~ 410 (832)
+.++.++++ + ...|+|++.+.++.|++. |=+ |.++ ++..++.++ .+ | .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~----y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK----Y-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh----c-----C
Confidence 345556655 1 899999999999999987 554 5443 112334343 22 2 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCc-cccccCC
Q 045882 411 PVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFI-GCSPSLS 489 (832)
Q Consensus 411 pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~s~~l~ 489 (832)
.++.+.+ +....+..+|..||+++.+|..||++++..||+..+. |++.=+.+ |-.+.+.
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~-------------------pI~afd~t~~~~~~i~ 388 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNL-------------------LILGFEETAHNRDFIA 388 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCC-------------------cEEEEecccCCccccc
Confidence 3666554 4456788999999999999999999999999999633 34443333 4444556
Q ss_pred CceEeCCCCHHHHHHHHHHHhcCCH
Q 045882 490 GAIRVNPWDIDAVADALHDAITMSD 514 (832)
Q Consensus 490 ~a~~VnP~d~~~~A~ai~~aL~m~~ 514 (832)
+|.++++.|+++++++|.++|+.+.
T Consensus 389 ~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 389 SENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred CCceecCCCHHHHHHHHHHHhcCHH
Confidence 6889999999999999999998764
No 162
>PRK06769 hypothetical protein; Validated
Probab=97.73 E-value=0.00025 Score=71.00 Aligned_cols=49 Identities=22% Similarity=0.167 Sum_probs=38.5
Q ss_pred cCcEEEEEecCCCcCCCCC----CCCCCCHHHHHHHHHhhccCCCeEEEEcCCC
Q 045882 577 TSRRAIFLDYDGTVVPHHA----LIKKPSRDVIYVLRELCGDSNNTTFIVSGRG 626 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 626 (832)
+..|+|++|.||||..+.. ..-.+-+.+.++|++| ++.|+.++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKL-KANHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 4679999999999977533 1223457889999999 67899999999864
No 163
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.67 E-value=0.00036 Score=73.15 Aligned_cols=66 Identities=17% Similarity=0.125 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-------ccccceEeCChh
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-------PSKARYYLDDEE 818 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-------~s~A~y~l~~~~ 818 (832)
+-..+..+++.+ |++++++++|||+.+|+.+-+.+|.. +++|+-|.. ...|.|.+++..
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 446678888888 99999999999999999999999863 355655532 124889999999
Q ss_pred HHHHHHH
Q 045882 819 DVLALLK 825 (832)
Q Consensus 819 eV~~~L~ 825 (832)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9987764
No 164
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.63 E-value=0.00057 Score=68.83 Aligned_cols=66 Identities=17% Similarity=0.074 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----cccc--ceEeCChhH
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKA--RYYLDDEED 819 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A--~y~l~~~~e 819 (832)
-.....+++.+ |.+++++++|||+.+|+.+-+.+|.. ++.+.-|.. ...| .+++++..+
T Consensus 106 p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~e 171 (181)
T PRK08942 106 PGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLAD 171 (181)
T ss_pred HHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHHH
Confidence 34566777777 99999999999999999999999853 245554532 2335 788888888
Q ss_pred HHHHHHH
Q 045882 820 VLALLKG 826 (832)
Q Consensus 820 V~~~L~~ 826 (832)
+.++|..
T Consensus 172 l~~~l~~ 178 (181)
T PRK08942 172 LPQALKK 178 (181)
T ss_pred HHHHHHh
Confidence 8887753
No 165
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.63 E-value=0.00029 Score=72.92 Aligned_cols=70 Identities=23% Similarity=0.238 Sum_probs=55.6
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~ 816 (832)
.-.|...+.++++++ |.+++.+++|||+.+|+.+-+.+|.. +++|.-|.. ...|.|.+++
T Consensus 137 ~Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~ 202 (214)
T PRK13288 137 AKPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDK 202 (214)
T ss_pred CCCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECC
Confidence 445678889999998 89999999999999999999999863 245555532 2358899999
Q ss_pred hhHHHHHHHH
Q 045882 817 EEDVLALLKG 826 (832)
Q Consensus 817 ~~eV~~~L~~ 826 (832)
..++.+++..
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
No 166
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.60 E-value=0.0011 Score=68.96 Aligned_cols=67 Identities=22% Similarity=0.216 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChhH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEED 819 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~e 819 (832)
|..+++.+++.+ +++++.+++|||+.+|+.+.+.+|.. .+.|..|.. ...|.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 567889999998 99999999999999999999999863 245555532 2357899999999
Q ss_pred HHHHHHH
Q 045882 820 VLALLKG 826 (832)
Q Consensus 820 V~~~L~~ 826 (832)
+..+|.+
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888753
No 167
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.57 E-value=0.00014 Score=77.42 Aligned_cols=72 Identities=17% Similarity=0.034 Sum_probs=56.6
Q ss_pred CcEEEEEecCCCcCCCCCCCCCC---CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCC---ceEEEeCCEEEE
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKP---SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCEN---LGIAAEHGYYLR 651 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~---l~liaenGa~i~ 651 (832)
..++|+||+||||++ ..+.+ ++.+.++|.+| ++.|..++|+|+.++..+...++.++- ...|..+|....
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 468999999999999 55555 79999999999 688999999998888888888876542 235666666554
Q ss_pred eC
Q 045882 652 WT 653 (832)
Q Consensus 652 ~~ 653 (832)
..
T Consensus 203 k~ 204 (303)
T PHA03398 203 EY 204 (303)
T ss_pred cc
Confidence 43
No 168
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.56 E-value=0.00053 Score=71.44 Aligned_cols=65 Identities=25% Similarity=0.237 Sum_probs=51.8
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChhHHH
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEEDVL 821 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~eV~ 821 (832)
..+..+++.+ |..++.++++||+.+|+.|-+.+|.. .++|+.|.. ...|.+++++..++.
T Consensus 149 ~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~~-----------~v~v~~g~~~~~~l~~~~~d~vi~~~~el~ 214 (220)
T COG0546 149 EPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGVP-----------AVGVTWGYNSREELAQAGADVVIDSLAELL 214 (220)
T ss_pred HHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCCC-----------EEEEECCCCCCcchhhcCCCEEECCHHHHH
Confidence 4566677777 88878999999999999999999842 367888742 356899999999998
Q ss_pred HHHHH
Q 045882 822 ALLKG 826 (832)
Q Consensus 822 ~~L~~ 826 (832)
..|..
T Consensus 215 ~~l~~ 219 (220)
T COG0546 215 ALLAE 219 (220)
T ss_pred HHHhc
Confidence 87753
No 169
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.41 E-value=0.0022 Score=66.49 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC------cccccceEeCC
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ------KPSKARYYLDD 816 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~------~~s~A~y~l~~ 816 (832)
|..|..+++.+. ..++.++++||+.||+.|.+.++.. ++-+. ....+-+..++
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCC
Confidence 457998888763 3467899999999999999998753 22221 12223334578
Q ss_pred hhHHHHHHHHhh
Q 045882 817 EEDVLALLKGLA 828 (832)
Q Consensus 817 ~~eV~~~L~~l~ 828 (832)
-.+|.+.|++.-
T Consensus 201 f~di~~~l~~~~ 212 (214)
T TIGR03333 201 FYDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHHh
Confidence 889988887653
No 170
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.15 E-value=0.0019 Score=76.89 Aligned_cols=64 Identities=13% Similarity=0.171 Sum_probs=51.3
Q ss_pred HhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCC-CeEEEEcCCChhhHHHHhcCC
Q 045882 573 AYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSN-NTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 573 ~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~l 637 (832)
.+.+...+.+++..||+++..-.....+-+.+.++|++| ++.| +.++|+||.+...+....+++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 344556788899999988863223456789999999999 6788 999999999999998888765
No 171
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.14 E-value=0.005 Score=64.06 Aligned_cols=63 Identities=10% Similarity=-0.001 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~e 819 (832)
.+....+.+++.+ |++++++++|||+.+|+++-+.+|.. ++.+.-+.. ...|.+++.+..+
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 4556888999998 99999999999999999999999863 133332321 1357777777777
Q ss_pred HH
Q 045882 820 VL 821 (832)
Q Consensus 820 V~ 821 (832)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 53
No 172
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.13 E-value=0.0022 Score=62.38 Aligned_cols=47 Identities=21% Similarity=0.253 Sum_probs=36.5
Q ss_pred EEEEEecCCCcCCCCCCC-------CCCCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 580 RAIFLDYDGTVVPHHALI-------KKPSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~-------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
++++||+||||....+.. -.+-+.+.++|+.| ++.|..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~L-k~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTL-RAAGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHH-HHCCCEEEEEeCCCc
Confidence 478999999999854311 13567888999999 688999999998753
No 173
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.11 E-value=0.0033 Score=63.03 Aligned_cols=63 Identities=16% Similarity=0.040 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~eV 820 (832)
+-..+...++++ |++++++++|||+.+|+..-+.+|... +..|.-|.. ...|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~~----------~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVKT----------NVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCcE----------EEEEecCCcccccccccCCEEeccHHHh
Confidence 345567777777 999999999999999999999998631 124444532 23488999888776
Q ss_pred H
Q 045882 821 L 821 (832)
Q Consensus 821 ~ 821 (832)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 4
No 174
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.09 E-value=0.0032 Score=78.54 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=49.0
Q ss_pred HHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 572 DAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
..+.+...+.+++-.||+++..-.....+-+.+.++|++| ++.|+.++++||.+....+...+.+
T Consensus 623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 3445556788888889987642113445667888999999 6889999999999999888877654
No 175
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.05 E-value=0.00087 Score=63.60 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=42.8
Q ss_pred EEEEEecCCCcCCCCC--CCC-------CCCHHHHHHHHHhhccCCCeEEEEcCC-ChhhHHHHhc
Q 045882 580 RAIFLDYDGTVVPHHA--LIK-------KPSRDVIYVLRELCGDSNNTTFIVSGR-GKVSLGEWLA 635 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~--~~~-------~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~ 635 (832)
|+|++|+||||++... ... .+-+.+.+.|+.| +++|+.++|+|++ ........++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998521 111 2467999999999 6789999999999 6666666664
No 176
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.05 E-value=0.0035 Score=62.94 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=32.5
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+.+..|+..++.+++.. ++.++++||+.||+.+.+.++.
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 356778988888886642 6889999999999999988864
No 177
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.97 E-value=0.0046 Score=61.15 Aligned_cols=38 Identities=18% Similarity=0.097 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
|-..+..+++.+ +++++++++|||+.+|+.+-+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 456677888887 89999999999999999999998863
No 178
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.91 E-value=0.005 Score=73.91 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=53.5
Q ss_pred HHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 569 RIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 569 ~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
...+.+.+...+.+++-+|++++..-.....+-+++.+++++| ++.|++++++||...........+++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~lG 484 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEAG 484 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 3344555666788888888887752223556778999999999 78899999999999999988887654
No 179
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.90 E-value=0.0037 Score=73.99 Aligned_cols=60 Identities=15% Similarity=0.188 Sum_probs=46.7
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCC-eEEEEcCCChhhHHHHhcCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNN-TTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~l 637 (832)
...+.++.-.||++...-.....+-+.+.++|++| ++.|+ +++++||.+........+.+
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 34466677778877652223456778999999999 68899 99999999999998888765
No 180
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.88 E-value=0.0055 Score=63.54 Aligned_cols=66 Identities=18% Similarity=0.141 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcE-EEEEeCCc------ccccceEeCC
Q 045882 745 TKGLVAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEI-FACTVGQK------PSKARYYLDD 816 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~-f~v~vG~~------~s~A~y~l~~ 816 (832)
-+......+++++ |+. ++.+++|||+.+|+.+-+.+|.. + ++|.-|.. ...|.+++++
T Consensus 146 P~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~ 211 (220)
T TIGR03351 146 PAPDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDS 211 (220)
T ss_pred CCHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecC
Confidence 3567888888888 887 79999999999999999999864 2 34544431 2457788888
Q ss_pred hhHHHHHH
Q 045882 817 EEDVLALL 824 (832)
Q Consensus 817 ~~eV~~~L 824 (832)
..++..++
T Consensus 212 ~~~l~~~~ 219 (220)
T TIGR03351 212 VADLPALL 219 (220)
T ss_pred HHHHHHhh
Confidence 88776654
No 181
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.88 E-value=0.00064 Score=64.60 Aligned_cols=57 Identities=21% Similarity=0.248 Sum_probs=44.1
Q ss_pred EEEEEecCCCcCCCCC-----CCCCCCHHHHHHHHHhhccCCCeEEEEcCCC--------hhhHHHHhcCC
Q 045882 580 RAIFLDYDGTVVPHHA-----LIKKPSRDVIYVLRELCGDSNNTTFIVSGRG--------KVSLGEWLAPC 637 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~-----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~l 637 (832)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++ ...+..++..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999995110 1235678999999999 68899999999998 66666666543
No 182
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.86 E-value=0.03 Score=62.73 Aligned_cols=70 Identities=11% Similarity=0.119 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCChhHH-H
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDDEEDV-L 821 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~~~eV-~ 821 (832)
+.......++.+ |+.++++++|||+.+|+..-+.+|.. +++|+-+.. ...|.+++++.+++ .
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 456777888888 99999999999999999999988863 244433321 23588999999997 5
Q ss_pred HHHHHhhh
Q 045882 822 ALLKGLAA 829 (832)
Q Consensus 822 ~~L~~l~~ 829 (832)
..|+.|.+
T Consensus 340 ~~l~~l~~ 347 (381)
T PLN02575 340 VDLKNLAD 347 (381)
T ss_pred HHHhhhhh
Confidence 66666654
No 183
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.86 E-value=0.02 Score=60.52 Aligned_cols=55 Identities=13% Similarity=0.167 Sum_probs=43.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHH--HHhcCC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLG--EWLAPC 637 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~l 637 (832)
+.++++||+||||.. ...+-+.+.++|++| ++.|..++|+|..++.... +.+..+
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 357999999999997 345678999999999 6789999999887665433 555544
No 184
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.83 E-value=0.0027 Score=66.74 Aligned_cols=70 Identities=20% Similarity=0.169 Sum_probs=50.3
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCC---CC-CCCCH---------------------------HHHHHHHHhhc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA---LI-KKPSR---------------------------DVIYVLRELCG 613 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~---~~-~~~s~---------------------------~~~~~L~~L~~ 613 (832)
.++++|.+.....+.-.|+||+||||++..+ .. ..+++ ...++|+.+ +
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l-~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH-Q 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH-H
Confidence 7899999888766666999999999998543 11 11122 267888888 6
Q ss_pred cCCCeEEEEcCC----ChhhHHHHhc
Q 045882 614 DSNNTTFIVSGR----GKVSLGEWLA 635 (832)
Q Consensus 614 d~g~~V~I~SGR----~~~~l~~~~~ 635 (832)
+.|.+++|+|+| ....+...++
T Consensus 128 ~~G~~i~iVTnr~~~k~~~~a~~ll~ 153 (237)
T TIGR01672 128 RRGDAIFFVTGRTPGKTDTVSKTLAK 153 (237)
T ss_pred HCCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 789999999999 3334444444
No 185
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.76 E-value=0.0079 Score=63.86 Aligned_cols=70 Identities=19% Similarity=0.150 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhH-
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEED- 819 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~e- 819 (832)
+-......++++ |.+++++++|||+.+|+..=+.+|.. +++|.-|.. ...|.|++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 446677888888 99999999999999999999998863 245554532 3468899998877
Q ss_pred -HHHHHHHhhh
Q 045882 820 -VLALLKGLAA 829 (832)
Q Consensus 820 -V~~~L~~l~~ 829 (832)
+...|..+.+
T Consensus 232 ~~~~~~~~~~~ 242 (248)
T PLN02770 232 KLWAALEELDQ 242 (248)
T ss_pred HHHHHHhhccc
Confidence 5555555443
No 186
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.67 E-value=0.0099 Score=64.55 Aligned_cols=61 Identities=16% Similarity=0.044 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV 820 (832)
+-.....+++.+ |.+++.+++|||+.+|+.+-+.+|.. +++|.-|.. -..|.+++++..++
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhc
Confidence 356778888888 99999999999999999999999863 245544532 13588888887765
No 187
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.65 E-value=0.012 Score=64.86 Aligned_cols=58 Identities=10% Similarity=0.028 Sum_probs=45.0
Q ss_pred CcEEEEEecCCCcCCCCC-CC-------CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHA-LI-------KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~-~~-------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
.+|+|++|+|+||..-.- .+ ..+-+.+.++|++| +++|+.++|+|..+...+...|..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHh
Confidence 469999999999997320 01 12347899999999 688999999999988888777753
No 188
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.60 E-value=0.054 Score=57.93 Aligned_cols=68 Identities=16% Similarity=0.188 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDVL 821 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV~ 821 (832)
+-......++.+ |++++.+++|||+.+|+..-+.+|.. +++|. |.. -..|.+.+++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 355677788888 99999999999999999999998863 24554 432 245888999988865
Q ss_pred H-HHHHhh
Q 045882 822 A-LLKGLA 828 (832)
Q Consensus 822 ~-~L~~l~ 828 (832)
. .|..|+
T Consensus 232 ~~~~~~~~ 239 (260)
T PLN03243 232 VVDLKNLS 239 (260)
T ss_pred HHHHhhhh
Confidence 3 334443
No 189
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.54 E-value=0.01 Score=70.63 Aligned_cols=61 Identities=10% Similarity=0.158 Sum_probs=49.1
Q ss_pred ccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 576 RTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+...+.++++.||+++..-.....+-+.+.++|++| ++.|+.++++||.....++...+.+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHc
Confidence 345688999999998763223456788999999999 6789999999999999888887754
No 190
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.48 E-value=0.015 Score=71.41 Aligned_cols=66 Identities=11% Similarity=0.108 Sum_probs=52.5
Q ss_pred HHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 572 DAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+.+.....+.+++=+||+++..-....++-++..++|++| ++.|+.++++||.....+..+.+.++
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~lg 606 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGELG 606 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 4556667788888899988752223456778999999999 67899999999999999998887653
No 191
>PRK08238 hypothetical protein; Validated
Probab=96.48 E-value=0.015 Score=67.53 Aligned_cols=36 Identities=11% Similarity=0.070 Sum_probs=28.9
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
.+++.+.|+++ ++.|.+++|+|+.+...++...+.+
T Consensus 74 ~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~~l 109 (479)
T PRK08238 74 NEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAAHL 109 (479)
T ss_pred ChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHc
Confidence 47788888888 6788999999998888887777654
No 192
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.46 E-value=0.046 Score=54.76 Aligned_cols=38 Identities=8% Similarity=0.116 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+-...+..++.+ +++++.+++|||+.+|+..-+.+|.
T Consensus 142 p~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 142 PDPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 4566778888888 9999999999999999999999886
No 193
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.34 E-value=0.022 Score=71.42 Aligned_cols=164 Identities=14% Similarity=0.181 Sum_probs=101.3
Q ss_pred HHhhccCcEEEEEecCC-----CcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeC
Q 045882 572 DAYKRTSRRAIFLDYDG-----TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEH 646 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~DG-----TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaen 646 (832)
..|.+...|.+++=+++ |++..-....+|-+++.++|++| ++.|+.++++||............++ +...+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~~G---i~~~~ 571 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARRLG---MPSKT 571 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC---CCCCC
Confidence 34555567888887765 44432113556778999999999 78999999999999999998887653 22111
Q ss_pred CEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 647 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
+..+ .. +.+.. . ...++ .+.+.+.
T Consensus 572 ~~~v------------~g------~~l~~-------------------------------~---~~~~l----~~~~~~~ 595 (884)
T TIGR01522 572 SQSV------------SG------EKLDA-------------------------------M---DDQQL----SQIVPKV 595 (884)
T ss_pred Ccee------------Eh------HHhHh-------------------------------C---CHHHH----HHHhhcC
Confidence 1100 00 00000 0 00122 2222211
Q ss_pred CEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC-
Q 045882 727 PVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ- 805 (832)
Q Consensus 727 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~- 805 (832)
.+--+...-.|...++.+.+. | ..|+++||+.||.++++.|+ +++++|.
T Consensus 596 ---------~Vfar~~P~~K~~iv~~lq~~----g---~~v~mvGDGvND~pAl~~Ad--------------VGia~g~~ 645 (884)
T TIGR01522 596 ---------AVFARASPEHKMKIVKALQKR----G---DVVAMTGDGVNDAPALKLAD--------------IGVAMGQT 645 (884)
T ss_pred ---------eEEEECCHHHHHHHHHHHHHC----C---CEEEEECCCcccHHHHHhCC--------------eeEecCCC
Confidence 111223334687777665432 3 67999999999999999997 5777874
Q ss_pred ----cccccceEe--CChhHHHHHHH
Q 045882 806 ----KPSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 806 ----~~s~A~y~l--~~~~eV~~~L~ 825 (832)
++..|++++ ++...+..++.
T Consensus 646 g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 646 GTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred cCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 246688988 56777766654
No 194
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.34 E-value=0.0045 Score=61.57 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=37.3
Q ss_pred CcEEEEEecCCCcCCCCCCCCC---------CCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 578 SRRAIFLDYDGTVVPHHALIKK---------PSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~---------~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
+.|++++|+||||+...+.... +-+.+.++|++| ++.|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCcc
Confidence 4689999999999974321111 236789999999 688999999997654
No 195
>PRK11587 putative phosphatase; Provisional
Probab=96.32 E-value=0.006 Score=63.32 Aligned_cols=61 Identities=11% Similarity=-0.012 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc---ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK---PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~---~s~A~y~l~~~~eV 820 (832)
+.......++.+ |++|+++++|||+.+|+..=+.+|.. +++|+.|.. ...|.+++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 345666777777 99999999999999999988888752 234443321 24577888877664
No 196
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.30 E-value=0.29 Score=53.84 Aligned_cols=198 Identities=20% Similarity=0.208 Sum_probs=115.2
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC--------
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP-------- 636 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-------- 636 (832)
|++.+|..--+..+-+|+-||=|+||...+. .-.++..++.-|-+|- ..|+.|.|+|.=++....++.+.
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~-sl~~d~pvi~~ii~LL-~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA-SLEPDNPVIPRIIKLL-RRGVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC-CCCCCchHHHHHHHHH-hcCCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 7777777665556889999999999998432 2234666776666663 57999999999887765554332
Q ss_pred -----CC-----Cce-EEEeCCEEEEeCCC----------ccEEEcCcccchhHH-HHHHHHHH-------HHHhc--CC
Q 045882 637 -----CE-----NLG-IAAEHGYYLRWTKK----------SEWETSTVAADFEWK-RITEPVMK-------LYTEA--TD 685 (832)
Q Consensus 637 -----l~-----~l~-liaenGa~i~~~~~----------~~w~~~~~~~~~~w~-~~v~~i~~-------~~~e~--~~ 685 (832)
++ ++. +-+|.-+..+...+ ..|... .-..|. +.+..+++ ...++ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~---~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP---EMKTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc---cccCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 11 122 33444555555432 234321 112342 23444443 33332 34
Q ss_pred ceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcC------CCEEEEEcC--eEEEEEeCCCCHHHHHHHHHHhh
Q 045882 686 GSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLAN------EPVVVKRGY--NIVEVKPQGVTKGLVAEKVLSTM 757 (832)
Q Consensus 686 gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~------~~~~v~~g~--~~vEV~p~gvnKG~al~~Ll~~l 757 (832)
..|-.|+-++...... .......+.+|+.-.+...+.. .|+....|. -+||| -||.-|++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP~~-~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVPKP-GVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEecCC-CCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHH
Confidence 5566777777654421 1112223444544444333322 345555553 45666 48999998887776
Q ss_pred hh-CCCCcceEEEEeCC
Q 045882 758 IS-DGKLPDFVLCVGDD 773 (832)
Q Consensus 758 ~~-~gi~~d~vl~~GDd 773 (832)
.. .+|.+.+++.+||-
T Consensus 362 ~~~~~i~~~~tLHVGDQ 378 (408)
T PF06437_consen 362 DPEGGIKPSETLHVGDQ 378 (408)
T ss_pred HhccCCCccceeeehhh
Confidence 21 37999999999994
No 197
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.18 E-value=0.072 Score=56.89 Aligned_cols=54 Identities=11% Similarity=0.206 Sum_probs=41.5
Q ss_pred CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCCh---hhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGK---VSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~~~~~~ 636 (832)
+.+.++||+||||.. ...+=+...++|++| +++|.+++++|-.+. ..+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 346899999999997 555668999999999 788999999976554 434444443
No 198
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.15 E-value=0.036 Score=56.17 Aligned_cols=48 Identities=23% Similarity=0.429 Sum_probs=39.9
Q ss_pred eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhH-HHHHH
Q 045882 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDE-DMFES 782 (832)
Q Consensus 735 ~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~-~Mf~~ 782 (832)
+.....|++.-||..+..+.......|+..+.++++||+.||. +|++.
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~L 201 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRL 201 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhc
Confidence 4445579999999999999888777899999999999999997 44443
No 199
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.02 E-value=0.038 Score=66.59 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=51.7
Q ss_pred HHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 571 VDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 571 ~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+.+.+...+.+++-.|++++.--.....+-+++.+++++| ++.|++++++||-.......+-.+++
T Consensus 417 ~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~elG 483 (679)
T PRK01122 417 VDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEAG 483 (679)
T ss_pred HHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 34455556677777788888752223456778999999999 78899999999999999988887653
No 200
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.99 E-value=0.022 Score=55.48 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=57.3
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
++.+.+ ++...|-|++|+|.||++. .+...+|++++-+..+ ++.|+.++|+|--+...+..+...++
T Consensus 18 i~~~~L----~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 18 ITPDIL----KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred CCHHHH----HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 566655 4568899999999999997 4667889999999999 78999999999999999988887663
No 201
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=95.98 E-value=0.027 Score=57.63 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=32.8
Q ss_pred CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 599 KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 599 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+-+++.++|+.| ++.|+.++++||.+..........++
T Consensus 127 ~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~lg 165 (215)
T PF00702_consen 127 PLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQLG 165 (215)
T ss_dssp EBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhh-hccCcceeeeeccccccccccccccc
Confidence 3456889999999 67899999999999999988887653
No 202
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.93 E-value=0.002 Score=58.46 Aligned_cols=51 Identities=14% Similarity=0.249 Sum_probs=37.8
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChh---hHHHHhcCC
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV---SLGEWLAPC 637 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~l 637 (832)
|+||+||||.. ...+-|.+.++|++| ++.|..++++|-.+.. .+.+.+..+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~ 54 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKL 54 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhc
Confidence 68999999997 455667889999999 6889999999876644 444444443
No 203
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.91 E-value=0.057 Score=65.09 Aligned_cols=71 Identities=13% Similarity=0.178 Sum_probs=51.8
Q ss_pred HHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 567 VDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 567 ~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+...+.+.+...+.++.-.|++++.--.....|-+++.+++++| ++.|++++++||-........-++++
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 444445555555566655457777642213456788999999999 78899999999999999988887654
No 204
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.90 E-value=0.027 Score=58.23 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQA 786 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~ 786 (832)
+......+++.+ |++++.+++|||+. +|+.+-+.+|..
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE
Confidence 445778888888 99999999999997 999999999863
No 205
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.79 E-value=0.11 Score=66.04 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
..+|-+++.++|+++ ++.|+.|+++|||....+.....+++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 345678999999999 78999999999999999998887653
No 206
>PLN02940 riboflavin kinase
Probab=95.72 E-value=0.078 Score=60.05 Aligned_cols=61 Identities=13% Similarity=0.025 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV 820 (832)
+......+++.+ |++++++++|||+.+|+..-+.+|.. +++|+-|.. ...|.+.+++..++
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHc
Confidence 456788888888 99999999999999999999999863 244443331 24577777777664
No 207
>PTZ00445 p36-lilke protein; Provisional
Probab=95.69 E-value=0.017 Score=58.70 Aligned_cols=158 Identities=22% Similarity=0.237 Sum_probs=98.0
Q ss_pred CHHHHHHHhhccCcEEEEEecCCCcCCCCC---CCC---------CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHH
Q 045882 566 SVDRIVDAYKRTSRRAIFLDYDGTVVPHHA---LIK---------KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEW 633 (832)
Q Consensus 566 ~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~---~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 633 (832)
..+.++..+++.+.|+|++|+|-||++..+ .+. .++++....+.+| ++.|+.|+|||=-+....
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~--- 105 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELI--- 105 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhc---
Confidence 456788889999999999999999998211 122 2689999999998 688999999995544321
Q ss_pred hcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHH
Q 045882 634 LAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAK 713 (832)
Q Consensus 634 ~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~ 713 (832)
+. ..++.+ +.. .+.++..++.- ....-++. ++-|- |.+. +..
T Consensus 106 ----~~----~~~~~~------------Isg-----~~li~~~lk~s---~~~~~i~~-----~~~yy---p~~w--~~p 147 (219)
T PTZ00445 106 ----PS----ENRPRY------------ISG-----DRMVEAALKKS---KCDFKIKK-----VYAYY---PKFW--QEP 147 (219)
T ss_pred ----cc----cCCcce------------ech-----HHHHHHHHHhc---Cccceeee-----eeeeC---Cccc--CCh
Confidence 10 001111 111 23344444322 11111111 12111 2221 111
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 714 ELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 714 el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+.... .=-++|....|..=++++++.. |+.|++++.|=|+....+.-+.+|.
T Consensus 148 ~~y~~-----------------~gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRP-----------------LGLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------hcccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 1124577778888889999999 9999999999999999998888875
No 208
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.67 E-value=0.043 Score=58.19 Aligned_cols=85 Identities=25% Similarity=0.507 Sum_probs=57.6
Q ss_pred HHHHHHHHHhCC---CCCEEEEeCcccccHHHHHHhhcC------CCeEEEEecCC-C----CChhhhhc--CCch----
Q 045882 186 VFADKIMEVINP---EEDYVWIHDYHLMVLPTFLRRRFH------RVKLGFFLHSP-F----PSSEIYRT--LPVR---- 245 (832)
Q Consensus 186 ~fa~~v~~~~~~---~~d~vwvhDyhl~llp~~lr~~~~------~~~ig~flH~P-f----P~~e~~r~--lp~r---- 245 (832)
.|+.++++.++. .-|+|++||+|..++|.+||.... ++++.|++|-. | |. +.+.. +|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 455555554432 239999999999999999999864 69999999953 2 22 22211 2321
Q ss_pred ----------HHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 246 ----------NEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 246 ----------~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.-+--|+..||.|-.=++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 23446799999999999999886653
No 209
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.61 E-value=0.073 Score=67.33 Aligned_cols=138 Identities=14% Similarity=0.170 Sum_probs=87.6
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
..+|-+++.+++++| ++.|++++++||.........-.+++ +...++.. +...+ +..
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~~G---I~~~~~~v------------i~G~~------~~~- 633 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARNCG---ILTFGGLA------------MEGKE------FRR- 633 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcC---CCCCCceE------------eeHHH------hhh-
Confidence 446778999999999 78899999999999999988877653 22222110 00000 000
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
.. ..++ .+.+.+. .-+-.+.|. .|...++.+.+.
T Consensus 634 ------------------------------l~---~~el----~~~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 634 ------------------------------LV---YEEM----DPILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred ------------------------------CC---HHHH----HHHhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 00 0122 2222221 112344454 698888887553
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeC-C----cccccceEeC--ChhHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVG-Q----KPSKARYYLD--DEEDVLALL 824 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG-~----~~s~A~y~l~--~~~eV~~~L 824 (832)
| .-|.++||+.||.++++.|+ +++++| . ++..|++++- +-..+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~Ad--------------VGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLAD--------------VGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCC--------------cceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 36999999999999999997 577787 3 3567888874 455555555
No 210
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.61 E-value=0.019 Score=57.84 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 602 RDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 602 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+++.+.|+.+ ++.|..|+|+||-....++.+...+
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~~ 126 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAERL 126 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHHT
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHHc
Confidence 5677889888 6789999999999988888887644
No 211
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.58 E-value=0.092 Score=66.24 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
..+|-+++.++|++| ++.|++++++||............++
T Consensus 535 ~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~~g 575 (917)
T TIGR01116 535 LDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRRIG 575 (917)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHcC
Confidence 456788999999999 78999999999999998888877653
No 212
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.53 E-value=0.086 Score=66.15 Aligned_cols=136 Identities=16% Similarity=0.191 Sum_probs=87.0
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
..+|-+++.+++++| ++.|+.|+++||-........-++++ +. ++ . .....+ +.
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~lG---I~--~~--------~----v~~G~e------l~-- 601 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHEVG---LD--AG--------E----VLIGSD------IE-- 601 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC---CC--cc--------C----ceeHHH------HH--
Confidence 446778999999999 78899999999999999998887654 20 11 0 000000 00
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
. .+ .+++.+.+ .+.. -+-.+.|. +|...++.+.+.
T Consensus 602 --~-----------------------l~-------~~el~~~~----~~~~-------VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 602 --T-----------------------LS-------DDELANLA----ERTT-------LFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred --h-----------------------CC-------HHHHHHHH----hhCc-------EEEEcCHH--HHHHHHHHHHHC
Confidence 0 00 01222222 1111 23345454 698888887553
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALL 824 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L 824 (832)
| .-|.++||+.||.+.|+.|+ ++++||+. +..|+.++ ++...+.+.+
T Consensus 637 ----G---~vVam~GDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAAD--------------IGISVDGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCC--------------EEEEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 3 46899999999999999998 57888753 67788887 3444554444
No 213
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.46 E-value=0.14 Score=59.63 Aligned_cols=67 Identities=21% Similarity=0.271 Sum_probs=47.8
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC----cccccceEeC
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ----KPSKARYYLD 815 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~----~~s~A~y~l~ 815 (832)
+-...-|+..++.|.++- | ..|.||||+.||..|.+.|+-+ +++ +|+ +.-+|+|-+.
T Consensus 763 RctPtQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSIt 823 (1051)
T KOG0210|consen 763 RCTPTQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSIT 823 (1051)
T ss_pred ecChhHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHH
Confidence 444557988887776654 3 6799999999999999999754 333 343 3567888776
Q ss_pred ChhHHHHHHH
Q 045882 816 DEEDVLALLK 825 (832)
Q Consensus 816 ~~~eV~~~L~ 825 (832)
....|-++|-
T Consensus 824 qF~Hv~rLLl 833 (1051)
T KOG0210|consen 824 QFSHVSRLLL 833 (1051)
T ss_pred HHHHHHHHhh
Confidence 6666666654
No 214
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.34 E-value=0.03 Score=55.82 Aligned_cols=56 Identities=18% Similarity=0.170 Sum_probs=44.2
Q ss_pred ccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCC-hhhHHHHh
Q 045882 576 RTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRG-KVSLGEWL 634 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~ 634 (832)
+...+++++|+||||+... ...+-+.+.++|+.| ++.|..++|+|+.+ ...+..++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~~~~~~~~~~ 78 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEEL-KAAGRKLLIVSNNAGEQRAKAVE 78 (170)
T ss_pred HCCCCEEEEecCCccccCC--CCCcChhHHHHHHHH-HHcCCEEEEEeCCchHHHHHHHH
Confidence 4578999999999999842 336778999999999 68899999999998 44444443
No 215
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.34 E-value=0.47 Score=51.46 Aligned_cols=166 Identities=14% Similarity=0.143 Sum_probs=111.6
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHh-------CCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccC
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKV-------HPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYG 405 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~-------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~ 405 (832)
...++++--...+...+.-+|.|.+..-++ +|. + |.+|+ |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 457889999999999999999999854221 232 2 33444 4678777788877765
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcCc--ceecccccCCCCcc--eeeeeeecCCCCchhhhhhhcCCCCCceEEeccC
Q 045882 406 VPGYEPVILIDRPVPLHEKTAYYALAEC--CIVNAVRDGMNLMP--YKYTICRQGTPKMDEAMELASVCPRTSMLVISEF 481 (832)
Q Consensus 406 ~~~~~pv~~~~~~v~~~el~aly~~ADv--~vvtS~~EGmnLv~--~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (832)
.|+.|.+.+--++-++.+.++..||. |+-||. -|+-|.. ..-.-| +-|+++-.|
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-------------------glPvcA~~f 373 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-------------------GLPVCAVNF 373 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-------------------CCceeeecc
Confidence 56778888888999999999999995 556664 4555442 333344 235666677
Q ss_pred ccccccC---CCceEeCCCCHHHHHHHHHHHhcC-C--HHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 482 IGCSPSL---SGAIRVNPWDIDAVADALHDAITM-S--DVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 482 ~G~s~~l---~~a~~VnP~d~~~~A~ai~~aL~m-~--~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
.-..+.+ .+|++++ |.+++|+.|..+.+- | ..+-. +.++.+.+..-.+|..++-+.+
T Consensus 374 kcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 374 KCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred hhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHhh
Confidence 6444444 3589885 899999999999872 2 22221 3333344445677887765543
No 216
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.33 E-value=0.12 Score=64.82 Aligned_cols=137 Identities=14% Similarity=0.174 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
...|-+++.+++++| ++.|+.|+++||-........-++++ +. ++.. ..
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~lG---I~--~~~v------------i~------------- 596 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICREVG---LE--PGEP------------LL------------- 596 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcC---CC--CCCc------------cc-------------
Confidence 446778999999999 78899999999999999988887654 21 1100 00
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
|..++ ..+ ..++.+. +.+. .-+-.+.|. +|...++.+.+.
T Consensus 597 ---------G~el~-----------~~~-------~~el~~~----v~~~-------~VfAr~sPe--~K~~iV~~Lq~~ 636 (903)
T PRK15122 597 ---------GTEIE-----------AMD-------DAALARE----VEER-------TVFAKLTPL--QKSRVLKALQAN 636 (903)
T ss_pred ---------hHhhh-----------hCC-------HHHHHHH----hhhC-------CEEEEeCHH--HHHHHHHHHHhC
Confidence 00000 000 0122222 2221 123445555 698888887653
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC----cccccceEe--CChhHHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ----KPSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~----~~s~A~y~l--~~~~eV~~~L~ 825 (832)
| .-|.++||+.||.++|+.|+ ++++||+ ++..|+.++ ++-..+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 46899999999999999998 6788885 367788887 34555544443
No 217
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.25 E-value=0.012 Score=58.44 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC-----cccccceEeCChhH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ-----KPSKARYYLDDEED 819 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~-----~~s~A~y~l~~~~e 819 (832)
.|+.++..+.+ |.....++++||+.||++|..-+.. |-..-|+ .+..|+||+++...
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~a-------------fi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADA-------------FIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchhh-------------hhccCCceEcHhhHhccHHHHHHHHH
Confidence 69999998877 5677899999999999998876543 2222222 25678888765544
Q ss_pred H
Q 045882 820 V 820 (832)
Q Consensus 820 V 820 (832)
+
T Consensus 221 L 221 (227)
T KOG1615|consen 221 L 221 (227)
T ss_pred H
Confidence 3
No 218
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.24 E-value=0.19 Score=64.31 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 598 KKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 598 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
..+.+++.+++++| ++.|++++++||...........++
T Consensus 655 d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~~~ 693 (1054)
T TIGR01657 655 NPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAREC 693 (1054)
T ss_pred cCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 45778999999999 7889999999999999998887764
No 219
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.18 E-value=0.14 Score=64.11 Aligned_cols=137 Identities=14% Similarity=0.153 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchhHHHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFEWKRITEPV 676 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 676 (832)
...|-+++.+++++| ++.|++++++||-........-++++ +. .+ .. ..
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~lG---I~--~~--------~v----~~------------- 561 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQEVG---ID--AN--------DF----LL------------- 561 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcC---CC--CC--------Ce----ee-------------
Confidence 346778999999999 78899999999999999988887654 21 00 00 00
Q ss_pred HHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHHh
Q 045882 677 MKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLST 756 (832)
Q Consensus 677 ~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 756 (832)
|..++. .. ..++.+. +.+.. -+-.+.|. .|...++.+.+.
T Consensus 562 ---------g~~l~~---------------~~---~~el~~~----~~~~~-------vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 562 ---------GADIEE---------------LS---DEELARE----LRKYH-------IFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred ---------cHhhhh---------------CC---HHHHHHH----hhhCe-------EEEECCHH--HHHHHHHHHHhC
Confidence 000000 00 0122222 21111 23334444 698888887543
Q ss_pred hhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHH
Q 045882 757 MISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 757 l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~ 825 (832)
| ..|.++||+.||.++|+.|+ ++++||.. +..|+.++ ++...+...+.
T Consensus 602 ----G---~vVam~GDGvNDapALk~Ad--------------VGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKAD--------------VGISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCC--------------EEEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 46999999999999999998 57788753 67788877 34455544443
No 220
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.16 E-value=0.051 Score=55.28 Aligned_cols=37 Identities=24% Similarity=0.193 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+-...+.+++.+ |+++++++.|||+.+|+..-+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~ 186 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGF 186 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCC
Confidence 356778888888 9999999999999999999998886
No 221
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.13 E-value=0.048 Score=57.35 Aligned_cols=62 Identities=18% Similarity=0.241 Sum_probs=46.0
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCC-----C--------------------------CCCCCHHHHHHHHHhhc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA-----L--------------------------IKKPSRDVIYVLRELCG 613 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~-----~--------------------------~~~~s~~~~~~L~~L~~ 613 (832)
.++++|.+.-...+.-.|++|+|||+++..+ . ...|-+.+.++|+.| +
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L-~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMH-V 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHH-H
Confidence 7889998876554556999999999996211 0 011234488899999 6
Q ss_pred cCCCeEEEEcCCCh
Q 045882 614 DSNNTTFIVSGRGK 627 (832)
Q Consensus 614 d~g~~V~I~SGR~~ 627 (832)
+.|+.++++|||+.
T Consensus 128 ~~G~~I~iVTnR~~ 141 (237)
T PRK11009 128 KRGDSIYFITGRTA 141 (237)
T ss_pred HCCCeEEEEeCCCC
Confidence 78999999999963
No 222
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.01 E-value=0.044 Score=57.07 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=45.7
Q ss_pred cCcEEEEEecCCCcCCCCC-----------------------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhh---H
Q 045882 577 TSRRAIFLDYDGTVVPHHA-----------------------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS---L 630 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l 630 (832)
.++-+++||+|.|++...+ ....+-+.++++++.| ++.|+.|+++|||+... .
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHH
Confidence 3567999999999997321 1234558899999999 68899999999999665 5
Q ss_pred HHHhcCC
Q 045882 631 GEWLAPC 637 (832)
Q Consensus 631 ~~~~~~l 637 (832)
.+++...
T Consensus 154 ~~nL~~~ 160 (229)
T TIGR01675 154 LDNLINA 160 (229)
T ss_pred HHHHHHc
Confidence 5666543
No 223
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.96 E-value=0.046 Score=59.61 Aligned_cols=58 Identities=22% Similarity=0.292 Sum_probs=46.7
Q ss_pred CcEEEEEecCCCcCCCCCC---------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 578 SRRAIFLDYDGTVVPHHAL---------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
+.+++++|+||||...... +..+.+.+.++|++| ++.|..++|+|||+.......+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHHH
Confidence 4589999999999973321 346778999999999 578999999999999887766553
No 224
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.93 E-value=0.25 Score=61.00 Aligned_cols=167 Identities=17% Similarity=0.166 Sum_probs=101.0
Q ss_pred HHhhccCcEEEEEec---CC--CcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeC
Q 045882 572 DAYKRTSRRAIFLDY---DG--TVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEH 646 (832)
Q Consensus 572 ~~y~~s~~rlI~lD~---DG--TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaen 646 (832)
+.+.....|.+.+=+ ++ +++.--....+|-+++.+++++| ++.|++|+++||.........-++++-.. +
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARRLGLGT----N 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHcCCCC----C
Confidence 334445567777655 33 44432123456788999999999 78899999999999999999888764110 0
Q ss_pred CEEEEeCCCccEEEcCcccchhHHHHHHHHHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCC
Q 045882 647 GYYLRWTKKSEWETSTVAADFEWKRITEPVMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANE 726 (832)
Q Consensus 647 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~ 726 (832)
+ ... +.+ . .|.. ... . ...++.+. +.+.
T Consensus 485 ---~-----------~~~------~~l-------~---~~~~-----------~~~----~---~~~~~~~~----~~~~ 512 (755)
T TIGR01647 485 ---I-----------YTA------DVL-------L---KGDN-----------RDD----L---PSGELGEM----VEDA 512 (755)
T ss_pred ---C-----------cCH------HHh-------c---CCcc-----------hhh----C---CHHHHHHH----HHhC
Confidence 0 000 000 0 0000 000 0 01222222 2222
Q ss_pred CEEEEEcCeEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc
Q 045882 727 PVVVKRGYNIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK 806 (832)
Q Consensus 727 ~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~ 806 (832)
. -+-++.|. +|...++.+.+. | .-|.++||+.||.+.|+.|+ +++++|+.
T Consensus 513 ~-------vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~Ad--------------VGIAm~~g 562 (755)
T TIGR01647 513 D-------GFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKAD--------------VGIAVAGA 562 (755)
T ss_pred C-------EEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCC--------------eeEEecCC
Confidence 1 24455565 698888887543 3 46999999999999999997 57777753
Q ss_pred ----ccccceEe--CChhHHHHHHH
Q 045882 807 ----PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 807 ----~s~A~y~l--~~~~eV~~~L~ 825 (832)
+..|+.++ ++...+...++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 56788777 34555555443
No 225
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=94.84 E-value=0.041 Score=51.25 Aligned_cols=54 Identities=28% Similarity=0.356 Sum_probs=42.9
Q ss_pred CCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cc----cccceEeCChhHHHHHHHHh
Q 045882 761 GKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KP----SKARYYLDDEEDVLALLKGL 827 (832)
Q Consensus 761 gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~----s~A~y~l~~~~eV~~~L~~l 827 (832)
+.+.++++++||+.||+.|++.+.-+ -|++++ .+ ..|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 44668999999999999999999865 356664 34 45888999999988887654
No 226
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.84 E-value=0.15 Score=64.13 Aligned_cols=42 Identities=17% Similarity=0.296 Sum_probs=36.1
Q ss_pred CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 596 LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 596 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
...+|-+++.++++.| ++.|++++++||-........-.+++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~G 585 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKECG 585 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHcC
Confidence 4456778999999998 78999999999999999988887764
No 227
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.75 E-value=1.7 Score=48.44 Aligned_cols=293 Identities=17% Similarity=0.159 Sum_probs=145.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCcc--cccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHH
Q 045882 175 LLWRAYVSANKVFADKIMEVINPEEDYVWIHDYH--LMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKAL 252 (832)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~~~~~~d~vwvhDyh--l~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~l 252 (832)
..|..|++.=+.+ .+ -+| |++..=|+- -..+...||+..|++||..+.- ||--.|| |.|...+..
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---PsVWAWr--~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---PSVWAWR--PKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---cceeeec--hhhHHHHHH-
Confidence 4566665443332 22 245 776666654 2346788999999999987553 4433444 666444444
Q ss_pred HhCCEEeecChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc-
Q 045882 253 LNADLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF- 331 (832)
Q Consensus 253 l~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~- 331 (832)
.+|++.--.+.-..-|- + .|+. ..|-|++. .|.-.+. ++ .+..|+++
T Consensus 136 -~~D~lLailPFE~~~y~----k-~g~~---------~~yVGHpl--------~d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILPFEPAFYD----K-FGLP---------CTYVGHPL--------ADEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecCCCHHHHH----h-cCCC---------eEEeCChh--------hhhcccc-----cc----HHHHHHHhC
Confidence 24554432222221111 0 1111 23334332 1111111 11 22244554
Q ss_pred ---CCCEEEEEec--cccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCC
Q 045882 332 ---KGKKVIVGVD--DMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGV 406 (832)
Q Consensus 332 ---~~~~vil~Vd--Rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~ 406 (832)
..+.+.+--| |=+...-.+..++|+++|.+++|+.+ ++.-..+ +.++.++.+ ....-.. +
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~~--~- 248 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEVA--G- 248 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhcccc--C-
Confidence 3454444333 44556667778899999999999988 6544433 233333332 2111100 0
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccc
Q 045882 407 PGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSP 486 (832)
Q Consensus 407 ~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~ 486 (832)
..++.+ ..+....+.+||+.+..| |.+.+|++.|+.|..-.-++.-...-- .-.+|-..+++...
T Consensus 249 ---~~~~~~-----~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~i--ak~lvk~~yisLpN 313 (381)
T COG0763 249 ---LSLILI-----DGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFI--AKRLVKLPYVSLPN 313 (381)
T ss_pred ---ceEEec-----CchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHH--HHHhccCCcccchH
Confidence 112222 447888899999999999 789999999976520000000000000 00122233344333
Q ss_pred cCCCceEeC-----CCCHHHHHHHHHHHhcCCH--HHHHHHHHHHHhhhhcCCHHHHHHHHHH
Q 045882 487 SLSGAIRVN-----PWDIDAVADALHDAITMSD--VEKQLRHEKHYRYICSHDVAYWAHSFMQ 542 (832)
Q Consensus 487 ~l~~a~~Vn-----P~d~~~~A~ai~~aL~m~~--~e~~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (832)
.+.|-.+|+ -..++.+|+++...+..+. ++..+..+.+++++.+..+..-+.+.+-
T Consensus 314 Ii~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 314 ILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 333322221 1246788999998887552 2223344455566655534444444433
No 228
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=94.74 E-value=2.1 Score=48.16 Aligned_cols=252 Identities=19% Similarity=0.251 Sum_probs=133.0
Q ss_pred HhCCCCCEEEEeCccc--ccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHHHHHH
Q 045882 194 VINPEEDYVWIHDYHL--MVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 194 ~~~~~~d~vwvhDyhl--~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~~Fl~ 271 (832)
..+| |+|..=||-= +-+...+|++.+..|+.++. +|.+|.==++|-..++.....=+..| .+-..|..
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---PFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---PFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---cccHHHHh
Confidence 3466 7877777763 34678899999887786644 23444333677776766433322222 11122221
Q ss_pred HHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHc--CCCEE--EEEecccccc-
Q 045882 272 CCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQF--KGKKV--IVGVDDMDIF- 346 (832)
Q Consensus 272 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v--il~VdRld~~- 346 (832)
+.| +-..|-|++. +|. . ...+.. ...++.+ .++++ ++-=+|-...
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~--~---~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE--V---KPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh--h---ccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1234445442 111 1 111111 1112222 33432 3334566544
Q ss_pred CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 045882 347 KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTA 426 (832)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~a 426 (832)
+.++..++|++++.+++|+++ ++....+. . ..+.+.+.....+.. .+++.+ ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc-----CCchHH
Confidence 445888999999999999987 66554332 1 112233332222111 123332 236778
Q ss_pred HHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCCCc-----eEeCCCCHHH
Q 045882 427 YYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLSGA-----IRVNPWDIDA 501 (832)
Q Consensus 427 ly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~~a-----~~VnP~d~~~ 501 (832)
.+++||+.+++| |.+.+|+...+.|.--.=+..-.+. -=...+|-..+.|....+-+. ++-+-.+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~--~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY--FIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH--HHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 7889999888665200000000000 000123446667766666332 4445668899
Q ss_pred HHHHHHHHhcCCHH
Q 045882 502 VADALHDAITMSDV 515 (832)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (832)
+++++...|+.++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999985543
No 229
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.70 E-value=0.31 Score=62.67 Aligned_cols=40 Identities=10% Similarity=0.059 Sum_probs=33.3
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
...+-+.+.+++++| ++.|+.|+++||-........-..+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHh
Confidence 445778999999999 6889999999999999887776543
No 230
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.63 E-value=0.032 Score=58.81 Aligned_cols=50 Identities=20% Similarity=0.269 Sum_probs=41.3
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEc---CCChhhHHHHhcC
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVS---GRGKVSLGEWLAP 636 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 636 (832)
++||+||||++ ... +-+.+.++|+.| +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 343 445889999999 67899999998 9999988877765
No 231
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.57 E-value=0.059 Score=55.42 Aligned_cols=65 Identities=14% Similarity=0.045 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCccc---ccce--EeCC
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQKPS---KARY--YLDD 816 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~s---~A~y--~l~~ 816 (832)
.+-.|...++.+. .. |. .++++||+.||++|++.++. +|.+..||. .|+- .+.+
T Consensus 129 ~~~~K~~~l~~l~-~~---~~---~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~ 187 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SL---YY---RVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHT 187 (203)
T ss_pred CcchHHHHHHHHH-hh---CC---CEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccC
Confidence 3457888888873 33 43 79999999999999999985 466666542 3332 3456
Q ss_pred hhHHHHHHHHh
Q 045882 817 EEDVLALLKGL 827 (832)
Q Consensus 817 ~~eV~~~L~~l 827 (832)
.+|++..+..-
T Consensus 188 ~~~~~~~~~~~ 198 (203)
T TIGR02137 188 YEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 232
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.51 E-value=0.15 Score=65.39 Aligned_cols=185 Identities=16% Similarity=0.150 Sum_probs=93.8
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCCEEEEeCCCccEEEcCcccchh-HHHHHHH
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHGYYLRWTKKSEWETSTVAADFE-WKRITEP 675 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenGa~i~~~~~~~w~~~~~~~~~~-w~~~v~~ 675 (832)
..++-+.+.+++++| ++.|++|+++||-....+...-..+. ++..+...+....+.. .+.. ..+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~~~---ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYSCR---LLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445667888888888 68899999999999999888765542 3333332222211110 0000 0011111
Q ss_pred HHHHHHhcCCceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCCEEEEEcCeEEEEEeCCCCHHHHHHHHHH
Q 045882 676 VMKLYTEATDGSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEPVVVKRGYNIVEVKPQGVTKGLVAEKVLS 755 (832)
Q Consensus 676 i~~~~~e~~~gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~ 755 (832)
.++...+... .....+..++...-. .+......++.+++..++......| +-.+.| -.|+..++.+.+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP--~qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAVI-----CCRVSP--SQKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEEE-----EeCCCH--HHHHHHHHHHHh
Confidence 1111100000 000012222222211 0000000112223333332222111 223334 479999988865
Q ss_pred hhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEe-CC----cccccceEeCChhHHHHHH
Q 045882 756 TMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTV-GQ----KPSKARYYLDDEEDVLALL 824 (832)
Q Consensus 756 ~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v-G~----~~s~A~y~l~~~~eV~~~L 824 (832)
.. | .-|+++||+.||.+|++.|+- +|.+ |. +...|+|.+.+-..+.++|
T Consensus 766 ~~---~---~~vl~iGDG~ND~~mlk~AdV--------------GIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST---G---KTTLAIGDGANDVSMIQEADV--------------GVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC---C---CeEEEEeCCCccHHHHhhcCe--------------eeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 2 469999999999999999984 4443 32 3457888887766666555
No 233
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=94.39 E-value=0.073 Score=56.49 Aligned_cols=50 Identities=16% Similarity=0.179 Sum_probs=38.5
Q ss_pred CcEEEEEecCCCcCCCCC-----------------C-------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChh
Q 045882 578 SRRAIFLDYDGTVVPHHA-----------------L-------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV 628 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~-----------------~-------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 628 (832)
.+-++++|+|+|++...+ . ..++-+.+++..+.| ++.|+.|+++|||+-.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchh
Confidence 457999999999994110 1 223457889999999 6889999999999854
No 234
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.38 E-value=0.056 Score=54.07 Aligned_cols=58 Identities=26% Similarity=0.176 Sum_probs=44.5
Q ss_pred cEEEEEecCCCcCCCCCC-----------------------CCCCCHHHHHHHHHhhccCCCeEEEEcCC-ChhhHHHHh
Q 045882 579 RRAIFLDYDGTVVPHHAL-----------------------IKKPSRDVIYVLRELCGDSNNTTFIVSGR-GKVSLGEWL 634 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~-----------------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 634 (832)
.||++||+|+||.++... ...+-+.+.++|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 489999999999975310 012347889999999 6789999999998 777777776
Q ss_pred cCC
Q 045882 635 APC 637 (832)
Q Consensus 635 ~~l 637 (832)
..+
T Consensus 81 ~~~ 83 (174)
T TIGR01685 81 GTF 83 (174)
T ss_pred HhC
Confidence 543
No 235
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.32 E-value=0.027 Score=55.54 Aligned_cols=44 Identities=30% Similarity=0.343 Sum_probs=31.7
Q ss_pred EEEEEecCCCcCCCCCCCC---------CCCHHHHHHHHHhhccCCCeEEEEcC
Q 045882 580 RAIFLDYDGTVVPHHALIK---------KPSRDVIYVLRELCGDSNNTTFIVSG 624 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SG 624 (832)
|+.+||+||||....+... ...+.+.++|++| .+.|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeC
Confidence 5889999999997543111 1345799999999 678999999984
No 236
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.17 E-value=0.19 Score=64.14 Aligned_cols=41 Identities=5% Similarity=0.031 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 597 IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 597 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
...|-+++.++++++ ++.|++|+++||........+-.+++
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~~G 684 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQEVG 684 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcC
Confidence 446778999999998 78999999999999999998887653
No 237
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.00 E-value=0.29 Score=57.52 Aligned_cols=60 Identities=12% Similarity=0.123 Sum_probs=42.7
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
...+.+++=++++++..-.....+-+++.++++.| ++.|+.++++||.........-..+
T Consensus 325 ~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 325 SGLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 34455555577766642213445667888888888 5689999999999999888877665
No 238
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=93.86 E-value=0.067 Score=62.55 Aligned_cols=50 Identities=18% Similarity=0.208 Sum_probs=39.1
Q ss_pred cCcEEEEEecCCCcCCCCCCC---------CCCCHHHHHHHHHhhccCCCeEEEEcCCCh
Q 045882 577 TSRRAIFLDYDGTVVPHHALI---------KKPSRDVIYVLRELCGDSNNTTFIVSGRGK 627 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~---------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 627 (832)
.+.|+++||+||||....+.. ..+-+.+.++|++| .+.|..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 567999999999999743211 12457889999999 688999999998665
No 239
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.82 E-value=0.055 Score=57.87 Aligned_cols=59 Identities=25% Similarity=0.242 Sum_probs=42.9
Q ss_pred cCcEEEEEecCCCcCCCCC-------C----------------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhH---
Q 045882 577 TSRRAIFLDYDGTVVPHHA-------L----------------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSL--- 630 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l--- 630 (832)
.++.+|++|+|+|++...+ . ...+-+.+.++|+.| ++.|..++|+|+|+....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHHHH
Confidence 5678999999999986321 0 112346778999999 678999999999985543
Q ss_pred HHHhcC
Q 045882 631 GEWLAP 636 (832)
Q Consensus 631 ~~~~~~ 636 (832)
..++..
T Consensus 152 ~~~Lkk 157 (266)
T TIGR01533 152 LKNLKR 157 (266)
T ss_pred HHHHHH
Confidence 355554
No 240
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=93.77 E-value=0.17 Score=51.68 Aligned_cols=67 Identities=19% Similarity=0.284 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChh
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEE 818 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~ 818 (832)
.|...+..+++.+ |++++++++|||+.+|+.+-+.+|.. +++|.-|.. ...|+|.+++..
T Consensus 132 P~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~ 197 (205)
T TIGR01454 132 PAPDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQ 197 (205)
T ss_pred CChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHH
Confidence 3567778888888 99999999999999999999999863 356666642 356899999999
Q ss_pred HHHHHHH
Q 045882 819 DVLALLK 825 (832)
Q Consensus 819 eV~~~L~ 825 (832)
++..++.
T Consensus 198 ~l~~~~~ 204 (205)
T TIGR01454 198 SLLALCR 204 (205)
T ss_pred HHHHHhh
Confidence 9887664
No 241
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=93.75 E-value=0.067 Score=54.53 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=37.9
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
..+-.|..+++.+++.. +++++.++++||+.+|++|++.++..
T Consensus 151 ~~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 151 CKGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CCChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 34567888899999887 89999999999999999999999864
No 242
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.75 E-value=0.092 Score=52.06 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=31.7
Q ss_pred hhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhh
Q 045882 574 YKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELC 612 (832)
Q Consensus 574 y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~ 612 (832)
.++...|.++||.|.||+++ ....++++..+.++++.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~ 72 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELK 72 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHH
Confidence 35678999999999999975 56778899999999984
No 243
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=93.47 E-value=0.37 Score=46.84 Aligned_cols=100 Identities=16% Similarity=0.265 Sum_probs=49.8
Q ss_pred HHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchH-HH----HHH-HHhCCEEeec
Q 045882 188 ADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRN-EI----LKA-LLNADLIGFH 261 (832)
Q Consensus 188 a~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~-~i----l~~-ll~~dligf~ 261 (832)
..++++..++ |+|++|.++...+..+... +.++.+++|.+++.........+.. .+ .+. .-.+|.+-.-
T Consensus 72 ~~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~v 146 (177)
T PF13439_consen 72 LRRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAV 146 (177)
T ss_dssp HHHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEES
T ss_pred HHHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEE
Confidence 3444555566 8999999998776544333 8899999998874311111111111 11 111 2357777666
Q ss_pred ChhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHH
Q 045882 262 TFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLE 312 (832)
Q Consensus 262 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~ 312 (832)
+..-++.+.+ .|+. ..++.++|+|||.++|+
T Consensus 147 S~~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 147 SESTKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp SHHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred CHHHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 6544444432 2221 13678899999999874
No 244
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=93.42 E-value=0.54 Score=53.56 Aligned_cols=138 Identities=9% Similarity=0.075 Sum_probs=79.2
Q ss_pred CEEEEEecc-ccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhc---------c
Q 045882 334 KKVIVGVDD-MDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINE---------T 403 (832)
Q Consensus 334 ~~vil~VdR-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~---------~ 403 (832)
..++++-.| =+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 355677778 55667888999999998655 5443 55544332 2333344333221 0000 0
Q ss_pred cCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc
Q 045882 404 YGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG 483 (832)
Q Consensus 404 ~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (832)
|.. ..+.++. ...+..++|++||++|..| |-+..|+++++.| .|+--+.+
T Consensus 276 ~~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-------------------~Ilip~~~ 325 (396)
T TIGR03492 276 FQK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-------------------VIQLPGKG 325 (396)
T ss_pred hcc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-------------------EEEEeCCC
Confidence 000 0122222 2457899999999999886 3455899998654 33322111
Q ss_pred c------ccc---C-CCceEeCCCCHHHHHHHHHHHhcC
Q 045882 484 C------SPS---L-SGAIRVNPWDIDAVADALHDAITM 512 (832)
Q Consensus 484 ~------s~~---l-~~a~~VnP~d~~~~A~ai~~aL~m 512 (832)
- .+. + .+++.+...+.+.+++++.+.++.
T Consensus 326 ~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 326 PQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred CHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC
Confidence 1 011 1 345555567789999999999874
No 245
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=93.24 E-value=0.16 Score=52.03 Aligned_cols=64 Identities=17% Similarity=0.145 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------ccccceEeCChhH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------PSKARYYLDDEED 819 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------~s~A~y~l~~~~e 819 (832)
+-..+..+++.+ |++++++++|||+.+|+.+.+.+|.. ++.|.-|.. ...|.|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 456788888988 99999999999999999999999863 234433431 2458899999888
Q ss_pred HHHH
Q 045882 820 VLAL 823 (832)
Q Consensus 820 V~~~ 823 (832)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7654
No 246
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=93.20 E-value=0.97 Score=52.08 Aligned_cols=132 Identities=18% Similarity=0.191 Sum_probs=72.2
Q ss_pred ecCCCchHHHhhcCCCC-hHHH-HHHHHHHc---CCCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEec
Q 045882 303 HVGIHMGRLESALNHPS-SSIK-VKEIREQF---KGKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVN 377 (832)
Q Consensus 303 P~GId~~~~~~~~~~~~-~~~~-~~~l~~~~---~~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 377 (832)
-+|.-..+....+...+ +... +...|++| +|..++.+..++. |=-+..+..+.++|++-|+-+ |++...
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~----L~L~~~ 322 (468)
T PF13844_consen 249 QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNLF--KISPETLDLWARILKAVPNSR----LWLLRF 322 (468)
T ss_dssp EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEE----EEEEET
T ss_pred ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcE----EEEeeC
Confidence 56777766654332221 1100 11124455 4667777777664 556888999999999999876 777665
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeec
Q 045882 378 PARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQ 455 (832)
Q Consensus 378 p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~ 455 (832)
|. .+ ++.+.+.+++ .|- +-.-++|. +..+.++..+.|+.+|||+-|..+-| +.+.+||+.++.
T Consensus 323 ~~--~~------~~~l~~~~~~----~Gv-~~~Ri~f~-~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmGV 385 (468)
T PF13844_consen 323 PA--SG------EARLRRRFAA----HGV-DPDRIIFS-PVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMGV 385 (468)
T ss_dssp ST--TH------HHHHHHHHHH----TTS--GGGEEEE-E---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT-
T ss_pred CH--HH------HHHHHHHHHH----cCC-ChhhEEEc-CCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcCC
Confidence 43 11 1223333332 242 22346654 46788999999999999999987766 466789999843
No 247
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=93.01 E-value=0.17 Score=51.56 Aligned_cols=65 Identities=15% Similarity=0.192 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccce-EeCChh
Q 045882 744 VTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARY-YLDDEE 818 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y-~l~~~~ 818 (832)
-.|..+++.+ +..++.+++|||+.||++|.+.++.+ |.++.+ ...+.+ .+++..
T Consensus 131 ~~k~~~l~~~-------~~~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~ 189 (205)
T PRK13582 131 DGKRQAVKAL-------KSLGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYD 189 (205)
T ss_pred chHHHHHHHH-------HHhCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHH
Confidence 3565555543 33457899999999999999999842 334432 123454 688999
Q ss_pred HHHHHHHHhhh
Q 045882 819 DVLALLKGLAA 829 (832)
Q Consensus 819 eV~~~L~~l~~ 829 (832)
++...|.....
T Consensus 190 el~~~l~~~~~ 200 (205)
T PRK13582 190 ELLAAIDKASA 200 (205)
T ss_pred HHHHHHHHHHh
Confidence 99888876543
No 248
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=92.61 E-value=4.4 Score=45.60 Aligned_cols=71 Identities=11% Similarity=0.082 Sum_probs=48.4
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc-CC-C
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS-LS-G 490 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~-l~-~ 490 (832)
+.+.++++..++.++++.|+++|-.|. =++ .||.+.+.| ++.+.+ .++ +. |
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P------------------vv~l~~----R~e~~~~g 316 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP------------------TINIGT----RQKGRLRA 316 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC------------------EEeecC----Cchhhhhc
Confidence 345668999999999999999885442 122 699998553 233322 333 32 3
Q ss_pred -c-eEeCCCCHHHHHHHHHHHhc
Q 045882 491 -A-IRVNPWDIDAVADALHDAIT 511 (832)
Q Consensus 491 -a-~~VnP~d~~~~A~ai~~aL~ 511 (832)
. ++| +.|.+++.+++.++++
T Consensus 317 ~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 317 DSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred CeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 447 7799999999999654
No 249
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.44 E-value=0.16 Score=49.28 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=43.8
Q ss_pred CcEEEEEecCCCcCCCC--C----CCC-----------------CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHh
Q 045882 578 SRRAIFLDYDGTVVPHH--A----LIK-----------------KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWL 634 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~--~----~~~-----------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 634 (832)
+++++++|+||||+... + ... .+-|.+.+.|..| + ++..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHH
Confidence 46789999999999842 1 001 1236788899999 4 47999999999999988877
Q ss_pred cCC
Q 045882 635 APC 637 (832)
Q Consensus 635 ~~l 637 (832)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 654
No 250
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=92.33 E-value=0.93 Score=45.82 Aligned_cols=55 Identities=18% Similarity=0.174 Sum_probs=40.6
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
...+-+++|+-|||-. .+. .-|...++|++| ++++..|=++|--+.++=+.+.++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~r 59 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHER 59 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHH
Confidence 3567899999999987 333 556889999999 778898888876665554444443
No 251
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.23 E-value=0.79 Score=58.69 Aligned_cols=61 Identities=8% Similarity=0.007 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc-----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK-----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~-----~s~A~y~l~~~~eV 820 (832)
+......+++.+ |+.++++++|||+.+|+..-+.+|.. +++|.-|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 356677788888 99999999999999999999888863 244443421 35677888888775
No 252
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=92.16 E-value=0.18 Score=49.28 Aligned_cols=56 Identities=18% Similarity=0.256 Sum_probs=42.0
Q ss_pred EEEEecCCCcCCCCC--------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChh---hHHHHhcCC
Q 045882 581 AIFLDYDGTVVPHHA--------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKV---SLGEWLAPC 637 (832)
Q Consensus 581 lI~lD~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~l 637 (832)
++++|+|||++..+. ......+.+.++.+++ +++|..++-+|+|+.. ..+.|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 479999999998421 0113457788899999 6899999999999964 555677654
No 253
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=92.12 E-value=0.45 Score=40.37 Aligned_cols=58 Identities=22% Similarity=0.320 Sum_probs=43.5
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--------ccccceEeCChh
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATYGSSLPIAPEIFACTVGQK--------PSKARYYLDDEE 818 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--------~s~A~y~l~~~~ 818 (832)
..++.+++.+ +++++++++|||+ .+|+.+=+.+|.. .+.|.-|.. ...++|++++..
T Consensus 8 ~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 8 GMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp HHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred HHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 3456677777 8999999999999 9999999999863 244444531 246788888766
Q ss_pred H
Q 045882 819 D 819 (832)
Q Consensus 819 e 819 (832)
|
T Consensus 74 e 74 (75)
T PF13242_consen 74 E 74 (75)
T ss_dssp G
T ss_pred h
Confidence 5
No 254
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.04 E-value=0.15 Score=56.73 Aligned_cols=47 Identities=21% Similarity=0.296 Sum_probs=38.4
Q ss_pred CcEEEEEecCCCcCCCCC--------CCCCCCHHHHHHHHHhhccCCCeEEEEcCC
Q 045882 578 SRRAIFLDYDGTVVPHHA--------LIKKPSRDVIYVLRELCGDSNNTTFIVSGR 625 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 625 (832)
++|++|+|.||||....+ ....+-+.+.++|..| +++|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECC
Confidence 578999999999998432 1234668899999999 7889999999985
No 255
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=91.61 E-value=12 Score=41.83 Aligned_cols=254 Identities=16% Similarity=0.108 Sum_probs=126.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHH--hCCEEeecC
Q 045882 185 KVFADKIMEVINPEEDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALL--NADLIGFHT 262 (832)
Q Consensus 185 ~~fa~~v~~~~~~~~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll--~~dligf~t 262 (832)
..|++. ++..+| |+|.||.=-...|..-+-...-++||+.. |-=-=+.|. +-|.-+|+.|-+. -||+----|
T Consensus 57 ~~~~~~-~~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~~t 130 (346)
T PF02350_consen 57 IELADV-LEREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFAPT 130 (346)
T ss_dssp HHHHHH-HHHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEESS
T ss_pred HHHHHH-HHhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhccCC
Confidence 334443 344578 89999988877777767666667776532 110000011 1244455555432 267766667
Q ss_pred hhhHHHHHHHHHHHhCCcccccCceeeEEEcCeEEEEEEeecCCCchHHHhhcCCCChHHHHHHHHHHcCCCEEEEEecc
Q 045882 263 FDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTIYVKILHVGIHMGRLESALNHPSSSIKVKEIREQFKGKKVIVGVDD 342 (832)
Q Consensus 263 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~VdR 342 (832)
..+.++.++ .|.+. ++ + ..+-.+++|.-........+.. ....+.....++.+++..=|
T Consensus 131 ~~~~~~L~~-----~G~~~--~r----I--------~~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~ 189 (346)
T PF02350_consen 131 EEARERLLQ-----EGEPP--ER----I--------FVVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHP 189 (346)
T ss_dssp HHHHHHHHH-----TT--G--GG----E--------EE---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-
T ss_pred HHHHHHHHh-----cCCCC--Ce----E--------EEEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCc
Confidence 777776653 24321 11 1 1123456665433322111111 01223222345556666655
Q ss_pred cccc---CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 045882 343 MDIF---KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPV 419 (832)
Q Consensus 343 ld~~---KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v 419 (832)
.... ......+.+++.+.+. +++. +|....++ +.....+.+...++ ..+.++ .++
T Consensus 190 ~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~~~-~~l 247 (346)
T PF02350_consen 190 VTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVRLI-EPL 247 (346)
T ss_dssp CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEEEE----
T ss_pred chhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEEEE-CCC
Confidence 5543 3456777788888777 5543 55444322 12233333322222 125554 479
Q ss_pred CHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---CCceEeCC
Q 045882 420 PLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL---SGAIRVNP 496 (832)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l---~~a~~VnP 496 (832)
+..++.++++.|+++|-.|- | +..||..++.| +|.=...|-.++. ...++| +
T Consensus 248 ~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~P-------------------~v~iR~~geRqe~r~~~~nvlv-~ 302 (346)
T PF02350_consen 248 GYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGKP-------------------VVNIRDSGERQEGRERGSNVLV-G 302 (346)
T ss_dssp -HHHHHHHHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSEEEE-T
T ss_pred CHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCCe-------------------EEEecCCCCCHHHHhhcceEEe-C
Confidence 99999999999999887763 2 22388888543 3433444444444 345666 4
Q ss_pred CCHHHHHHHHHHHhcC
Q 045882 497 WDIDAVADALHDAITM 512 (832)
Q Consensus 497 ~d~~~~A~ai~~aL~m 512 (832)
.|.+++.+||.+++..
T Consensus 303 ~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 303 TDPEAIIQAIEKALSD 318 (346)
T ss_dssp SSHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhC
Confidence 8999999999999974
No 256
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=91.16 E-value=25 Score=39.43 Aligned_cols=137 Identities=15% Similarity=0.171 Sum_probs=85.4
Q ss_pred CEEEEEecccccc-CCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 334 KKVIVGVDDMDIF-KGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 334 ~~vil~VdRld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|--..|. +-+++.. +.+++. -..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~~----~~v~e~~----------~~~L~~--~~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHPR----PRVRELV----------LKRLKN--VERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCCC----hhhhHHH----------HHHhCC--CCcE
Confidence 4677777787766 999999999999999998765 44333221 2222221 112222 1124
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccCC-C-
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSLS-G- 490 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l~-~- 490 (832)
.++ .++...+...|...|-+.+--| |=..-||-.-+. -++++-+.+.=.+.+. |
T Consensus 265 ~li-~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~------------------Pvl~lR~~TERPE~v~agt 320 (383)
T COG0381 265 KLI-DPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK------------------PVLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEe-CCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC------------------cEEeeccCCCCccceecCc
Confidence 444 5899999999999996655444 122234444322 1455555555555553 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHH
Q 045882 491 AIRVNPWDIDAVADALHDAITMSDV 515 (832)
Q Consensus 491 a~~VnP~d~~~~A~ai~~aL~m~~~ 515 (832)
.++|+ .|.+.+.+++.++++.++.
T Consensus 321 ~~lvg-~~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVG-TDEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeC-ccHHHHHHHHHHHhhChHH
Confidence 35665 5789999999999986543
No 257
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.16 E-value=0.025 Score=59.27 Aligned_cols=52 Identities=15% Similarity=0.208 Sum_probs=39.2
Q ss_pred cCcEEEEEecCCCcCCCCC-----------------------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhh
Q 045882 577 TSRRAIFLDYDGTVVPHHA-----------------------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS 629 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 629 (832)
.++..++||+|+|++.... ....+-+.+++.++.+ .+.|..|+++|||+...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchh
Confidence 5678999999999985210 0112335688999998 68899999999998773
No 258
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=91.00 E-value=0.48 Score=48.97 Aligned_cols=22 Identities=9% Similarity=0.173 Sum_probs=19.1
Q ss_pred ceEEEEeCChhhHHHHHHcccc
Q 045882 765 DFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 765 d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+...+.|||.||.+||+.+++.
T Consensus 176 ~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 176 KLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hheEEecCCcccHHHHHhCCCc
Confidence 3458999999999999999863
No 259
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=90.76 E-value=0.24 Score=50.56 Aligned_cols=35 Identities=14% Similarity=0.017 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 602 RDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 602 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+.+.++|+.| ++. +.++|+|+.....+..++..++
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~~g 105 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQLG 105 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHHcC
Confidence 4456788888 455 8999999999999998887654
No 260
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=90.49 E-value=0.38 Score=48.94 Aligned_cols=37 Identities=11% Similarity=-0.011 Sum_probs=30.2
Q ss_pred CHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 601 SRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 601 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
-+.+.+.|+.+ ++.|..++|+||.....+..+.+.++
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~lg 125 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARILG 125 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHHcC
Confidence 45667788887 67899999999999998888887654
No 261
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=90.42 E-value=0.42 Score=52.85 Aligned_cols=49 Identities=22% Similarity=0.276 Sum_probs=36.8
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccC----CCeEEEEc---CCChhhHHHHh
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDS----NNTTFIVS---GRGKVSLGEWL 634 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~----g~~V~I~S---GR~~~~l~~~~ 634 (832)
.++||+||||.. ...+-+...++|+.| +.. |..++++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 589999999997 445578999999999 566 88888776 55666544433
No 262
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=90.24 E-value=3.9 Score=43.54 Aligned_cols=55 Identities=15% Similarity=0.244 Sum_probs=39.8
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHH-HcccccCCCCCCCCCcEEEEEeCC
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE-SISQATYGSSLPIAPEIFACTVGQ 805 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~-~a~~~~~~~~~~~~~~~f~v~vG~ 805 (832)
.-.|.+||.++..++..+ |..|+.|+++-|+.-.+.-.+ ++.. .+-.++++.-..
T Consensus 157 ft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~--------~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK--------SGIDFIGFHYTG 212 (252)
T ss_pred EeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh--------CCCcEEEEEEcc
Confidence 356789999999999999 999999999999975554444 3332 223456666554
No 263
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.07 E-value=0.72 Score=52.19 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=56.0
Q ss_pred CHHHHHHHhhccCcEEEEEecCCCcCCCC----C---------CCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHH
Q 045882 566 SVDRIVDAYKRTSRRAIFLDYDGTVVPHH----A---------LIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGE 632 (832)
Q Consensus 566 ~~~~i~~~y~~s~~rlI~lD~DGTLl~~~----~---------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 632 (832)
.+..++.|.....+|.+++|+|+||..-. . ..+.+-.+..+.+..| .++|+.++|||=.....+.+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 45577778777889999999999999611 0 1122335667788888 78999999999999999999
Q ss_pred HhcCCC
Q 045882 633 WLAPCE 638 (832)
Q Consensus 633 ~~~~l~ 638 (832)
.|...|
T Consensus 288 vF~khp 293 (574)
T COG3882 288 VFRKHP 293 (574)
T ss_pred HHhhCC
Confidence 998755
No 264
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=89.99 E-value=34 Score=38.42 Aligned_cols=150 Identities=15% Similarity=0.119 Sum_probs=81.7
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
+++.|+-+|-=--.+.+...+.+....+.+ ++.+++++.+. . +++++....++ +...|
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~------~~~v~~~~G~~----~-~~~~~~~~~~~-----------~~~~v 239 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN------RIQVIHQTGKN----D-LEELKSAYNEL-----------GVVRV 239 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh------CeEEEEEcCcc----h-HHHHHHHHhhc-----------CcEEE
Confidence 677777777544444444444444333322 45577776332 2 33333332222 11112
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc-----
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS----- 487 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~----- 487 (832)
..+ .+++.++|++||++|.=| | ++++.|..+++.| ..+|-...+--..+
T Consensus 240 ~~f-----~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~P-----------------~IliP~p~~~~~~Q~~NA~ 293 (357)
T COG0707 240 LPF-----IDDMAALLAAADLVISRA---G-ALTIAELLALGVP-----------------AILVPYPPGADGHQEYNAK 293 (357)
T ss_pred eeH-----HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCCC-----------------EEEeCCCCCccchHHHHHH
Confidence 222 346999999999988644 2 4788899999764 23333332210112
Q ss_pred -C---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCC
Q 045882 488 -L---SGAIRVNPWD--IDAVADALHDAITMSDVEKQLRHEKHYRYICSHD 532 (832)
Q Consensus 488 -l---~~a~~VnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (832)
+ ..|+.+.-++ .+.+++.|.++++. .|+..+|....+.+..-+
T Consensus 294 ~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~--~~~l~~m~~~a~~~~~p~ 342 (357)
T COG0707 294 FLEKAGAALVIRQSELTPEKLAELILRLLSN--PEKLKAMAENAKKLGKPD 342 (357)
T ss_pred HHHhCCCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCCCC
Confidence 2 2366666655 78999999999974 445555555444444433
No 265
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=89.81 E-value=0.96 Score=48.11 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=46.6
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
....+|++|+|.||........-+++.+.+.|.+| ++.|..+++=|--+.+-+..-+..+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHHh
Confidence 45679999999999985433345789999999999 6889888888877777666666554
No 266
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=89.14 E-value=2 Score=54.39 Aligned_cols=46 Identities=22% Similarity=0.342 Sum_probs=35.7
Q ss_pred eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 735 ~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
-.+-.+....-|+..++.+.+. ...-+++|||+.||..|++.|+-+
T Consensus 771 sViCCR~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 771 SVICCRVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred EEEEccCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCcC
Confidence 4555666667799999998443 245799999999999999988743
No 267
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=89.12 E-value=2.2 Score=42.51 Aligned_cols=45 Identities=13% Similarity=0.249 Sum_probs=29.9
Q ss_pred eEEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 735 NIVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 735 ~~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
.++||.|. +|-.=.+.|.+.. |++++.++.|=|...-.+--+.+|
T Consensus 100 ~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lG 144 (169)
T PF12689_consen 100 DYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLG 144 (169)
T ss_dssp CEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT
T ss_pred chhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecC
Confidence 46899886 9999999999988 999999999987643333333343
No 268
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=89.04 E-value=0.57 Score=48.80 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=24.1
Q ss_pred CCCcceEEEEeCChhhHHHHHHcccc
Q 045882 761 GKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 761 gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
|..|+++++|.|+.+.+..-+++|..
T Consensus 156 gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 156 GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred CCChHHeEEEecchhHHHHHHHCCCE
Confidence 88999999999999999999999864
No 269
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=88.76 E-value=1.2 Score=47.70 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------------------
Q 045882 746 KGLVAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------------------ 806 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------------------ 806 (832)
+-..+...++.+ |+. ++++++|||+.+|+.+-+.+|.. +++|+-|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 345677778888 885 69999999999999999999853 355655532
Q ss_pred -----------ccccceEeCChhHHHHHHHHhh
Q 045882 807 -----------PSKARYYLDDEEDVLALLKGLA 828 (832)
Q Consensus 807 -----------~s~A~y~l~~~~eV~~~L~~l~ 828 (832)
...|.+.+++..++..+|+.+.
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~ 258 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIE 258 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHH
Confidence 2458899999999888876543
No 270
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=88.09 E-value=0.64 Score=48.48 Aligned_cols=67 Identities=15% Similarity=0.060 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc--ccccceEeCChhHHHHHHH
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK--PSKARYYLDDEEDVLALLK 825 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~--~s~A~y~l~~~~eV~~~L~ 825 (832)
.....+++.+ |++++++++|||+.+|+..=+.+|.. .+++|+.+.. ...|...+++.+++.++|+
T Consensus 153 ~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (224)
T PRK14988 153 RLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRLIP 219 (224)
T ss_pred HHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHHhh
Confidence 3456667777 89999999999999998888888753 1234455443 2334445567777777777
Q ss_pred Hh
Q 045882 826 GL 827 (832)
Q Consensus 826 ~l 827 (832)
.|
T Consensus 220 ~l 221 (224)
T PRK14988 220 SL 221 (224)
T ss_pred hh
Confidence 65
No 271
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=87.18 E-value=0.58 Score=49.08 Aligned_cols=79 Identities=24% Similarity=0.293 Sum_probs=53.7
Q ss_pred EEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEE-eC----------Ccc
Q 045882 739 VKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACT-VG----------QKP 807 (832)
Q Consensus 739 V~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~-vG----------~~~ 807 (832)
-.|.+.-||..++.+++.....|...+.|+++||+.||.-.-..++.. . ++++ -| ...
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~---------D--~v~~R~~~~l~~~i~~~~~~ 212 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPR---------D--VVFPRKGYPLHKLIQKNPGE 212 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCC---------C--EEecCCCChHHHHHhcCCCc
Confidence 346778999999999987555578899999999999998665554431 0 1111 11 112
Q ss_pred cccceEe-CChhHHHHHHHHhh
Q 045882 808 SKARYYL-DDEEDVLALLKGLA 828 (832)
Q Consensus 808 s~A~y~l-~~~~eV~~~L~~l~ 828 (832)
-+|+-+. .+-.|+.+.|++|+
T Consensus 213 ~~a~v~~W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 213 VKAEVVPWSSGEEILEILLQLI 234 (234)
T ss_pred ceeEEEecCCHHHHHHHHHhhC
Confidence 3455443 67788888888763
No 272
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=87.18 E-value=0.65 Score=47.74 Aligned_cols=37 Identities=11% Similarity=-0.019 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+.+.+.+.|+.+ ++. ..++|+||-....+.++++.++
T Consensus 69 l~pga~ell~~l-k~~-~~~~IVS~~~~~~~~~il~~lg 105 (203)
T TIGR02137 69 PLEGAVEFVDWL-RER-FQVVILSDTFYEFSQPLMRQLG 105 (203)
T ss_pred CCccHHHHHHHH-HhC-CeEEEEeCChHHHHHHHHHHcC
Confidence 456777888888 444 4999999999999988887765
No 273
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=86.86 E-value=49 Score=37.28 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=46.6
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccc----cccC-
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGC----SPSL- 488 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----s~~l- 488 (832)
.+.+.+++. +++..||++| .+-|+ -+..|+++++.| +|+--+.+- +..+
T Consensus 291 ~~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~GvP-------------------~v~~P~~~dQ~~~a~~~~ 344 (401)
T cd03784 291 RVVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAGVP-------------------QLVVPFFGDQPFWAARVA 344 (401)
T ss_pred EEeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcCCC-------------------EEeeCCCCCcHHHHHHHH
Confidence 445567655 4578899998 45665 566899999664 444444331 2222
Q ss_pred -CC-ceEeCCC--CHHHHHHHHHHHhc
Q 045882 489 -SG-AIRVNPW--DIDAVADALHDAIT 511 (832)
Q Consensus 489 -~~-a~~VnP~--d~~~~A~ai~~aL~ 511 (832)
.| |+.+++. +.+++++++.++|+
T Consensus 345 ~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 345 ELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 13 5555554 68999999999997
No 274
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=86.82 E-value=6 Score=47.98 Aligned_cols=57 Identities=11% Similarity=0.136 Sum_probs=45.6
Q ss_pred HhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 573 AYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 573 ~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
.|......|.|+-+=|-+= .|-+++.++++.+ ++.|+.|..+||-.......+-+++
T Consensus 565 ~~~~~E~~LtFvGlVGi~D-------PPR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 565 NRATAESDLTFVGLVGILD-------PPRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred cccccccceEEEEEeeccC-------CCchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHh
Confidence 3444556888988777543 4678999999887 7899999999999999998887765
No 275
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=86.65 E-value=1.7 Score=46.09 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc------------------
Q 045882 746 KGLVAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK------------------ 806 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~------------------ 806 (832)
+-......++.+ |+. ++++++|||+.+|+.+=+.+|.. +++|.-|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 345667777777 885 89999999999999999999863 356665532
Q ss_pred -----------ccccceEeCChhHHHHHH
Q 045882 807 -----------PSKARYYLDDEEDVLALL 824 (832)
Q Consensus 807 -----------~s~A~y~l~~~~eV~~~L 824 (832)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 235788899888876654
No 276
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=86.60 E-value=0.71 Score=44.67 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
+......+++++ |+++ .+++|||+.+|+.+=+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 346677888888 8888 9999999999998877654
No 277
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=86.14 E-value=1.1 Score=45.54 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=43.9
Q ss_pred ccCcEEEEEecCCCcCCCCCCCCC----CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 576 RTSRRAIFLDYDGTVVPHHALIKK----PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~~~----~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+.++|++++|+|+||+...+.... .-|.+.+.|+.+. + ...|+|=|..+...+...+..+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~-~-~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAY-E-DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHH-h-CCEEEEEecCCHHHHHHHHHHh
Confidence 356799999999999974321211 2367788888885 3 7899999999888887766643
No 278
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=84.82 E-value=0.56 Score=45.90 Aligned_cols=56 Identities=20% Similarity=0.174 Sum_probs=38.1
Q ss_pred EEEEEecCCCcCCCCCCCCC----------------CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 580 RAIFLDYDGTVVPHHALIKK----------------PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~----------------~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
|++++|+||||+........ +-|.+.+.|+.+. +...++|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~--~~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELS--KHYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHH--HHCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHH--HhceEEEEEeehhhhhhHHHHhh
Confidence 68999999999974321110 2367778888884 36899999999998888777654
No 279
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=84.09 E-value=1.1 Score=44.95 Aligned_cols=46 Identities=26% Similarity=0.369 Sum_probs=34.9
Q ss_pred cEEEEEecCCCcCCCCC-CC-----CCCCHHHHHHHHHhhccCCCeEEEEcCC
Q 045882 579 RRAIFLDYDGTVVPHHA-LI-----KKPSRDVIYVLRELCGDSNNTTFIVSGR 625 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~-~~-----~~~s~~~~~~L~~L~~d~g~~V~I~SGR 625 (832)
.++||+|-||||--..+ .. -..-+.++.+|.+| ++.|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l-~~~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKL-QRAGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHH-HhCCCeEEEEECC
Confidence 68999999999986322 11 12357889999999 6889999999853
No 280
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=83.80 E-value=1.1 Score=42.60 Aligned_cols=68 Identities=18% Similarity=0.146 Sum_probs=40.9
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHH-----HHHHhCCEEeecChhhHHHHHH
Q 045882 199 EDYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEIL-----KALLNADLIGFHTFDYARHFLS 271 (832)
Q Consensus 199 ~d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il-----~~ll~~dligf~t~~~~~~Fl~ 271 (832)
.|+|++|+++..++..+++++. ++++.+.+|..+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~~-~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRRR-GIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHHH-T--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHcc-CCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 3999999998887887777444 7999999997543221 12222222 4466789999988877777654
No 281
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=83.48 E-value=0.92 Score=46.00 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChh
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKV 628 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 628 (832)
|-+.+.++|++| .+.|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 456788999999 4778888888888754
No 282
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=83.20 E-value=2.8 Score=43.64 Aligned_cols=15 Identities=33% Similarity=0.647 Sum_probs=13.3
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
+.|+|+||+||||++
T Consensus 9 ~~k~vIFDlDGTL~d 23 (224)
T PRK14988 9 DVDTVLLDMDGTLLD 23 (224)
T ss_pred cCCEEEEcCCCCccc
Confidence 357999999999998
No 283
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=83.20 E-value=10 Score=42.85 Aligned_cols=97 Identities=15% Similarity=0.083 Sum_probs=56.9
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc----C-
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS----L- 488 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~----l- 488 (832)
.+.+.+++. .++..||++|.. -|.| +..|+++++.+ +|+.-..+-.+. +
T Consensus 278 ~~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G~P-------------------~v~~p~~~dq~~~a~~l~ 331 (392)
T TIGR01426 278 EVRQWVPQL---EILKKADAFITH---GGMN-STMEALFNGVP-------------------MVAVPQGADQPMTARRIA 331 (392)
T ss_pred EEeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhCCC-------------------EEecCCcccHHHHHHHHH
Confidence 345667764 567899988854 4665 56899999654 444333322211 2
Q ss_pred --CCceEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC-CHHHHHH
Q 045882 489 --SGAIRVNP--WDIDAVADALHDAITMSDVEKQLRHEKHYRYICSH-DVAYWAH 538 (832)
Q Consensus 489 --~~a~~VnP--~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~-~~~~W~~ 538 (832)
.-|+.++. .+.++++++|.++|..+ +.+++.+++.+.+... .....++
T Consensus 332 ~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 332 ELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred HCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 12555553 46789999999999743 3444445555544443 3344443
No 284
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=82.32 E-value=2.2 Score=41.88 Aligned_cols=61 Identities=15% Similarity=0.060 Sum_probs=45.8
Q ss_pred ccCcEEEEEecCCCcCCCCCCC------C--------------------------CCCHHHHHHHHHhhccCCCeEEEEc
Q 045882 576 RTSRRAIFLDYDGTVVPHHALI------K--------------------------KPSRDVIYVLRELCGDSNNTTFIVS 623 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~~------~--------------------------~~s~~~~~~L~~L~~d~g~~V~I~S 623 (832)
+.++..+++|+|.||+...... . .+-|.+.+.|++|+ ++..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~--~~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEAS--KLYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHH--hhcEEEEEe
Confidence 4678899999999999733210 0 01257788999994 469999999
Q ss_pred CCChhhHHHHhcCCC
Q 045882 624 GRGKVSLGEWLAPCE 638 (832)
Q Consensus 624 GR~~~~l~~~~~~l~ 638 (832)
..+...+...+..+.
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999998888887664
No 285
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=82.26 E-value=2.1 Score=42.31 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=37.9
Q ss_pred cEEEEEecCCCcCCCCCCCC---------------------CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 579 RRAIFLDYDGTVVPHHALIK---------------------KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~---------------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
++.+++|+|+||+....... ..-|.+.+.|..|. + ...++|.|.-+...+...+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~-~-~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVS-K-WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHH-h-cCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999999997322110 01245677777773 3 3778888877777777766654
No 286
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=81.26 E-value=2.3 Score=42.35 Aligned_cols=38 Identities=18% Similarity=0.145 Sum_probs=28.3
Q ss_pred eCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 741 PQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 741 p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+-|.+|+..+..+.+ +++.++++||+.+|++.-+....
T Consensus 143 ~fG~dK~~vI~~l~e-------~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 143 QFGHDKSSVIHELSE-------PNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred ccCCCcchhHHHhhc-------CCceEEEecCCcccccHhhhhhh
Confidence 457788888888754 35668999999999876665544
No 287
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=81.24 E-value=0.79 Score=45.92 Aligned_cols=38 Identities=11% Similarity=0.001 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+-......++.+ |.+++++++|||+.+|+..=+.+|.
T Consensus 143 P~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 143 PAPDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 4556788888888 9999999999999999999999885
No 288
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=80.95 E-value=1.9 Score=44.18 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=41.3
Q ss_pred HHHHHHHhhhhCCCC-cceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC--cccccceEeCChhHHHH
Q 045882 749 VAEKVLSTMISDGKL-PDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ--KPSKARYYLDDEEDVLA 822 (832)
Q Consensus 749 al~~Ll~~l~~~gi~-~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~--~~s~A~y~l~~~~eV~~ 822 (832)
|.++.++.. |+. |.++++|-||.+-+.-=+.+|.. +|-||. +.-.+.|.+.+..+..+
T Consensus 165 afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d~~l~~ih~~k~ 225 (244)
T KOG3109|consen 165 AFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVDYALEQIHNNKE 225 (244)
T ss_pred HHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchHHHHHHhhchhh
Confidence 566666666 888 99999999999999888888763 566664 44566676654444433
No 289
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=80.84 E-value=0.13 Score=62.08 Aligned_cols=218 Identities=21% Similarity=0.201 Sum_probs=108.3
Q ss_pred cCcccC--CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhc---cCCCeEEEEcCCChhh----
Q 045882 559 IGFGLS--LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCG---DSNNTTFIVSGRGKVS---- 629 (832)
Q Consensus 559 ~~~~~~--l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~---d~g~~V~I~SGR~~~~---- 629 (832)
||+.+. +....+-...-..+.-|.++|+||||-.+ ...+....++.-.+++. ++...-.++|||++..
T Consensus 167 ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~---t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~ 243 (732)
T KOG1050|consen 167 IGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFH---TDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKA 243 (732)
T ss_pred EEEeccCCCChHHHHHhcccHHHHHHhhhccCccccc---cccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeee
Confidence 444442 44444444433445568899999999984 34444333333322221 2222356699999765
Q ss_pred ------HHHHhcCCCCceEEEeCCEEEEeCC-CccEEEcCcccch-----hHHHHHHHHHHHHHhcCC------------
Q 045882 630 ------LGEWLAPCENLGIAAEHGYYLRWTK-KSEWETSTVAADF-----EWKRITEPVMKLYTEATD------------ 685 (832)
Q Consensus 630 ------l~~~~~~l~~l~liaenGa~i~~~~-~~~w~~~~~~~~~-----~w~~~v~~i~~~~~e~~~------------ 685 (832)
+.++.+ +.+++.++++|..+..+. +.......+..|. .+....++.++.|-+-.+
T Consensus 244 ~pigid~~r~v~-~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~ 322 (732)
T KOG1050|consen 244 LPIGIDVQRFVK-LLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKR 322 (732)
T ss_pred cccccchHHhhc-cccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCc
Confidence 444443 346778888888887654 2222222222221 233344444444433211
Q ss_pred --ceEEeecceeEEEEeccCCCCCCchhHHHHHHHHHHHhcCCC-EEEEEcCeEEEEEeC-CCCHHHHHHHHHHhhhhCC
Q 045882 686 --GSYIEKKETALVWHYQDAAPGFGSCQAKELLDHLESVLANEP-VVVKRGYNIVEVKPQ-GVTKGLVAEKVLSTMISDG 761 (832)
Q Consensus 686 --gs~ie~k~~~l~~~~~~ad~~~~~~~a~el~~~l~~~l~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~g 761 (832)
|.-+++-..++..|++..+..++...+.-+ ..+....+ .....+....|+.|. .+.||.++..+.......+
T Consensus 323 ~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV----~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 323 TDGKEVEELKFCVSVHVRRINEKFGSASYQPV----HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred ccchHHHHHHHHhHhhhhhhhhccCCcccceE----EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 111111223333344433333332110000 00000000 112334456788886 7899999988877664333
Q ss_pred --CCcceEEEEeCChhhHHHHHHcc
Q 045882 762 --KLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 762 --i~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
-..=...++||+.+|++-+..+.
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvn 423 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVN 423 (732)
T ss_pred cCCceEEeeeccccccccccCEEEC
Confidence 22234678999999977666554
No 290
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=80.66 E-value=4.5 Score=43.67 Aligned_cols=93 Identities=12% Similarity=0.118 Sum_probs=57.6
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.+++ +++.++. .+ .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~~----l~~~~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLDE----LKKFAKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHHH----HHHHHHh----CC-----CE
Confidence 367999999999988666777777653 23332 333433321 22333 3333322 11 24
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
.++. ..+++..+++.||++|.. -|.+.+|+++++.|
T Consensus 227 ~~~~---~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 227 ILFI---DVENMAELMNEADLAIGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred EEEe---CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCCC
Confidence 3332 256899999999998874 35899999999664
No 291
>PRK11590 hypothetical protein; Provisional
Probab=80.38 E-value=2.1 Score=44.14 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=27.8
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
|-.|-..++.. + |.+.+...+-|||.||.+||+.+++.
T Consensus 161 g~~K~~~l~~~---~---~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 161 GHEKVAQLERK---I---GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred ChHHHHHHHHH---h---CCCcceEEEecCCcccHHHHHhCCCC
Confidence 44555444443 3 44667788999999999999999874
No 292
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=80.35 E-value=3.1 Score=50.65 Aligned_cols=90 Identities=26% Similarity=0.330 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHhcCCCEEEEEcCe----------------EEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCCh
Q 045882 711 QAKELLDHLESVLANEPVVVKRGYN----------------IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDR 774 (832)
Q Consensus 711 ~a~el~~~l~~~l~~~~~~v~~g~~----------------~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ 774 (832)
.+++..+.|++. +..+...+|++ +-|+.|. +|...++.+.+. | ..|+++||+.
T Consensus 541 ~a~~aI~~L~~~--Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~----g---~~VamVGDGI 609 (713)
T COG2217 541 DAKEAIAALKAL--GIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPE--DKAEIVRELQAE----G---RKVAMVGDGI 609 (713)
T ss_pred hHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHcChHhheccCCcH--HHHHHHHHHHhc----C---CEEEEEeCCc
Confidence 466777776552 12244556653 3466666 598888888643 3 5799999999
Q ss_pred hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEe--CChhHHHHHHH
Q 045882 775 SDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYL--DDEEDVLALLK 825 (832)
Q Consensus 775 ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l--~~~~eV~~~L~ 825 (832)
||-+.|..++ +++++|.. ...|+..+ +|...|.++++
T Consensus 610 NDAPALA~Ad--------------VGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 610 NDAPALAAAD--------------VGIAMGSGTDVAIEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred hhHHHHhhcC--------------eeEeecCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999997 57888863 56788877 56777766654
No 293
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=79.27 E-value=2.2 Score=44.04 Aligned_cols=16 Identities=44% Similarity=0.833 Sum_probs=14.0
Q ss_pred CcEEEEEecCCCcCCC
Q 045882 578 SRRAIFLDYDGTVVPH 593 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~~ 593 (832)
.+|+.+||+||||+..
T Consensus 4 ~~~la~FDfDgTLt~~ 19 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQ 19 (210)
T ss_pred cCcEEEEcCCCCCccC
Confidence 5789999999999983
No 294
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=78.77 E-value=12 Score=41.33 Aligned_cols=126 Identities=19% Similarity=0.163 Sum_probs=79.1
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccE
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPV 412 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv 412 (832)
++..|+-=..=|++-++...|+++.+... .+ +.++.- - +.+..++++.++|.+...++ ||. ..+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIivP--L--sYg~~n~~Yi~~V~~~~~~l---F~~---~~~ 247 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKIIVP--L--SYGANNQAYIQQVIQAGKEL---FGA---ENF 247 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEEEE--C--CCCCchHHHHHHHHHHHHHh---cCc---cce
Confidence 34344444456788888777776655321 12 222221 1 22223456777776666554 442 236
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccc-cCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CC
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVR-DGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SG 490 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~-EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~ 490 (832)
..+++.+|.+|+.++++.+|+.++...| .|||...+ .+.+ +.++++|+-.-....+ ..
T Consensus 248 ~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-------------------G~~v~L~~~np~~~~l~~~ 307 (360)
T PF07429_consen 248 QILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-------------------GKKVFLSRDNPFWQDLKEQ 307 (360)
T ss_pred eEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-------------------CCeEEEecCChHHHHHHhC
Confidence 6678899999999999999999999975 89987643 1222 4578888887766666 33
Q ss_pred ceEe
Q 045882 491 AIRV 494 (832)
Q Consensus 491 a~~V 494 (832)
++.|
T Consensus 308 ~ipV 311 (360)
T PF07429_consen 308 GIPV 311 (360)
T ss_pred CCeE
Confidence 5444
No 295
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=78.30 E-value=2.2 Score=43.66 Aligned_cols=38 Identities=24% Similarity=0.228 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
-|+..++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 191 ~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 191 EKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred chhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 4666677777654 55444 79999999999999998753
No 296
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=77.99 E-value=1.3 Score=44.93 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=31.2
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHccc
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQ 785 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~ 785 (832)
......+++.+ |++++++++|||+. +|+..-+.+|.
T Consensus 163 ~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 PKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 45678888888 99999999999997 89999888875
No 297
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=76.67 E-value=5.2 Score=42.00 Aligned_cols=36 Identities=17% Similarity=0.130 Sum_probs=22.1
Q ss_pred CHHHHHHHHHhhc-cCCCeEEEEcCCChhhHHHHhcC
Q 045882 601 SRDVIYVLRELCG-DSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 601 s~~~~~~L~~L~~-d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
.+.+.++++.+.+ ..|..++|+|--.-..++.+++.
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 4555566666632 34667777777766666666654
No 298
>PRK09449 dUMP phosphatase; Provisional
Probab=75.80 E-value=8.5 Score=39.68 Aligned_cols=65 Identities=20% Similarity=0.092 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhhhCCCC-cceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCC-c---ccccceEeCChhHH
Q 045882 747 GLVAEKVLSTMISDGKL-PDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQ-K---PSKARYYLDDEEDV 820 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~-~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~-~---~s~A~y~l~~~~eV 820 (832)
-.....+++.+ |.. ++.+++|||+. +|+..=+.+|.. ++.+.-+. . ...+.|.+++..++
T Consensus 153 p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 153 VAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred HHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 45677788888 864 58999999997 799999998863 12222121 1 13478889999998
Q ss_pred HHHHH
Q 045882 821 LALLK 825 (832)
Q Consensus 821 ~~~L~ 825 (832)
..+|.
T Consensus 219 ~~~l~ 223 (224)
T PRK09449 219 EQLLC 223 (224)
T ss_pred HHHHh
Confidence 88765
No 299
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=75.50 E-value=1.3 Score=44.05 Aligned_cols=37 Identities=8% Similarity=-0.007 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+-.....+++.+ |.+++.+++|||+.+|+.+-+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 345667788888 9999999999999999999999875
No 300
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=75.47 E-value=1.6 Score=45.82 Aligned_cols=37 Identities=16% Similarity=0.015 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQ 785 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~ 785 (832)
+.......++.+ |.+++++++|||+ ..|+..=+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 456677778887 9999999999999 699999888886
No 301
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=74.86 E-value=2.4 Score=43.69 Aligned_cols=39 Identities=8% Similarity=-0.037 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
.+......+++.+ |+.++.+++|||+.+|+..-+.+|..
T Consensus 143 P~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 143 PDPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 3567888888888 99999999999999999998888753
No 302
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=74.62 E-value=1.4 Score=44.79 Aligned_cols=34 Identities=15% Similarity=-0.054 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFES 782 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~ 782 (832)
+-.....+++.+ |++++++++|||+.+|+.+-+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 445667778887 9999999999999999876543
No 303
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=74.52 E-value=3.1 Score=44.73 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=29.5
Q ss_pred CCHHHHHHH-HHHhhhhCC--CCcceEEEEeCChhhHHHHHHc
Q 045882 744 VTKGLVAEK-VLSTMISDG--KLPDFVLCVGDDRSDEDMFESI 783 (832)
Q Consensus 744 vnKG~al~~-Ll~~l~~~g--i~~d~vl~~GDd~ND~~Mf~~a 783 (832)
.+|...+.. ..+.+ + .++++++++||+.||+.|..-+
T Consensus 191 ~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 191 FNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred cccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 578776664 56666 5 7889999999999999996665
No 304
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=74.47 E-value=16 Score=35.17 Aligned_cols=72 Identities=18% Similarity=0.206 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 045882 352 KLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA 431 (832)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A 431 (832)
-+.++..+++++ ++..|.||.|-.-++..+. ..+.+++.++++..+|+ .||++.++..+..+-.+.+..+
T Consensus 41 ~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~~ 110 (141)
T COG0816 41 DFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIEA 110 (141)
T ss_pred hHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHHc
Confidence 455666666665 4558889999877777666 67789999999999997 5899999988888777777665
Q ss_pred Cc
Q 045882 432 EC 433 (832)
Q Consensus 432 Dv 433 (832)
++
T Consensus 111 ~~ 112 (141)
T COG0816 111 GV 112 (141)
T ss_pred CC
Confidence 43
No 305
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=73.87 E-value=2.8 Score=44.34 Aligned_cols=15 Identities=33% Similarity=0.598 Sum_probs=13.5
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
|.|+|+||+||||++
T Consensus 1 ~~k~viFD~DGTLiD 15 (253)
T TIGR01422 1 KIEAVIFDWAGTTVD 15 (253)
T ss_pred CceEEEEeCCCCeec
Confidence 358999999999998
No 306
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=73.75 E-value=1.6e+02 Score=33.01 Aligned_cols=28 Identities=7% Similarity=-0.003 Sum_probs=23.8
Q ss_pred HHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 424 KTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 424 l~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
...+|++||+++..| |.+.+|++.++.|
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g~P 256 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIGTP 256 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhCCC
Confidence 457899999999998 6788899999765
No 307
>COG4996 Predicted phosphatase [General function prediction only]
Probab=72.50 E-value=8.9 Score=36.12 Aligned_cols=58 Identities=24% Similarity=0.117 Sum_probs=41.2
Q ss_pred EEEEEecCCCcCCCCCCC--C-------------------CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 580 RAIFLDYDGTVVPHHALI--K-------------------KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~--~-------------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
++|+||.||||.++.... . ..-+.+.+.|+.+ +..|..+..+|=.......+.+..++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~wa-rnsG~i~~~~sWN~~~kA~~aLral~ 79 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWA-RNSGYILGLASWNFEDKAIKALRALD 79 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHH-HhCCcEEEEeecCchHHHHHHHHHhc
Confidence 579999999999854311 0 1236777888887 67888888888887776666665543
No 308
>PHA02597 30.2 hypothetical protein; Provisional
Probab=72.45 E-value=1.8 Score=43.92 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHc--ccccCCCCCCCCCcEEEEEeCCcc--cccceEeCChhHHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESI--SQATYGSSLPIAPEIFACTVGQKP--SKARYYLDDEEDVL 821 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a--~~~~~~~~~~~~~~~f~v~vG~~~--s~A~y~l~~~~eV~ 821 (832)
|-..+..+++.+ | ++.+++|||+.+|+..-+.+ |.. ++.|..|..+ -.+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 556788888888 7 78899999999998888887 753 3455555422 24557777766654
No 309
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=71.80 E-value=7.5 Score=38.50 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=48.4
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCC------------------------------CCCCCCHHHHHHHHHhhcc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHA------------------------------LIKKPSRDVIYVLRELCGD 614 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~------------------------------~~~~~s~~~~~~L~~L~~d 614 (832)
.++.+|......-+.-.+-||+|.|++-..+ ..-.++.++..-|-.+-+.
T Consensus 49 iSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 6788888877777778888999999984221 0113555655555555577
Q ss_pred CCCeEEEEcCCChhhHHH
Q 045882 615 SNNTTFIVSGRGKVSLGE 632 (832)
Q Consensus 615 ~g~~V~I~SGR~~~~l~~ 632 (832)
.|-.|+++|||+....+.
T Consensus 129 RGD~i~FvTGRt~gk~d~ 146 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDT 146 (237)
T ss_pred cCCeEEEEecCCCCcccc
Confidence 899999999999875443
No 310
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=70.70 E-value=3.6 Score=44.04 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=13.7
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
+.|+|+||+||||++
T Consensus 3 ~~k~vIFDlDGTLiD 17 (267)
T PRK13478 3 KIQAVIFDWAGTTVD 17 (267)
T ss_pred ceEEEEEcCCCCeec
Confidence 468999999999999
No 311
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=70.39 E-value=12 Score=43.49 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDVL 821 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV~ 821 (832)
|-..+...++.+ .++++++|||+.+|+.+-+.+|.. +++|.-|.. ...|.|.+++..++.
T Consensus 387 kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el~ 450 (459)
T PRK06698 387 KSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLELK 450 (459)
T ss_pred CcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHHH
Confidence 445666666654 468999999999999999999863 234443421 245889999999998
Q ss_pred HHHHHh
Q 045882 822 ALLKGL 827 (832)
Q Consensus 822 ~~L~~l 827 (832)
.+|...
T Consensus 451 ~~l~~~ 456 (459)
T PRK06698 451 GILSTV 456 (459)
T ss_pred HHHHHH
Confidence 887654
No 312
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=70.05 E-value=2.6 Score=43.33 Aligned_cols=66 Identities=15% Similarity=0.085 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEeCCc----ccccceEeCChhHH
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTVGQK----PSKARYYLDDEEDV 820 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~----~s~A~y~l~~~~eV 820 (832)
+....+.+++.+. |++++++++|||+. +|+..=+.+|.. .+.+..|.. ...+.|.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 3445566666542 67899999999997 899999999863 133443322 23566788888887
Q ss_pred HHHH
Q 045882 821 LALL 824 (832)
Q Consensus 821 ~~~L 824 (832)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
No 313
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=69.63 E-value=3.8 Score=40.94 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+-.....+++.+ |..++++++|||+..|+..=+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 345777888888 9999999999999999888888875
No 314
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=69.59 E-value=13 Score=38.27 Aligned_cols=63 Identities=21% Similarity=0.280 Sum_probs=45.7
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCC-hhhHHHHHHcccccCCCCCCCCCcEEEEEeCCcc-------cccceEeCChhH
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDD-RSDEDMFESISQATYGSSLPIAPEIFACTVGQKP-------SKARYYLDDEED 819 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~~-------s~A~y~l~~~~e 819 (832)
..-+.+++.+ |++|++++.|||+ .||+.--+.+|.. +|.+.... ....+.+.+..+
T Consensus 158 ~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~~ 221 (229)
T COG1011 158 EIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLAE 221 (229)
T ss_pred HHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHHH
Confidence 3556677777 9999999999998 5887888888763 55554322 356667777777
Q ss_pred HHHHHHH
Q 045882 820 VLALLKG 826 (832)
Q Consensus 820 V~~~L~~ 826 (832)
+..++..
T Consensus 222 l~~~~~~ 228 (229)
T COG1011 222 LLDLLER 228 (229)
T ss_pred HHHHHhh
Confidence 7777654
No 315
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=69.59 E-value=32 Score=34.38 Aligned_cols=51 Identities=18% Similarity=0.070 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCC--CEEEEeCcccccHHHHHHhhcCCCeEEEE
Q 045882 176 LWRAYVSANKVFADKIMEVINPEE--DYVWIHDYHLMVLPTFLRRRFHRVKLGFF 228 (832)
Q Consensus 176 ~w~~Y~~vN~~fa~~v~~~~~~~~--d~vwvhDyhl~llp~~lr~~~~~~~ig~f 228 (832)
.|+.=...=+..|+.+.+.-+.+. |+|.-| +-+.=+-+||+.+|++++.-+
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 455444444555555554433332 999999 999999999999999988744
No 316
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=68.66 E-value=20 Score=39.46 Aligned_cols=101 Identities=15% Similarity=0.099 Sum_probs=55.0
Q ss_pred CCEEEEEeccc--cccCCHH---HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCC
Q 045882 333 GKKVIVGVDDM--DIFKGIS---LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVP 407 (832)
Q Consensus 333 ~~~vil~VdRl--d~~KGi~---~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~ 407 (832)
...+.+-||-= .+.=+-. .++..+..+.+.++ .. ++ |. +||-..++ ..+.+.++.+.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vt-tSRRTp~~---~~~~L~~~~~~-------- 207 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VT-TSRRTPPE---AEAALRELLKD-------- 207 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EE-cCCCCcHH---HHHHHHHhhcC--------
Confidence 45555555531 1222222 56677777777765 22 33 32 33333332 22333333221
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecC
Q 045882 408 GYEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQG 456 (832)
Q Consensus 408 ~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~ 456 (832)
..-+.++. .-+..=+.+++..||.++||. |..+++ .||++++.+
T Consensus 208 -~~~~~~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~tG~p 251 (311)
T PF06258_consen 208 -NPGVYIWD-GTGENPYLGFLAAADAIVVTE--DSVSMV-SEAAATGKP 251 (311)
T ss_pred -CCceEEec-CCCCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHcCCC
Confidence 11243343 333445889999999999997 777776 499998553
No 317
>PRK09449 dUMP phosphatase; Provisional
Probab=68.59 E-value=3.3 Score=42.81 Aligned_cols=15 Identities=27% Similarity=0.270 Sum_probs=13.4
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
+.|.|+||+||||++
T Consensus 2 ~~k~iiFDlDGTLid 16 (224)
T PRK09449 2 KYDWILFDADETLFH 16 (224)
T ss_pred CccEEEEcCCCchhc
Confidence 368999999999997
No 318
>PHA02597 30.2 hypothetical protein; Provisional
Probab=67.67 E-value=8.7 Score=38.77 Aligned_cols=22 Identities=32% Similarity=0.452 Sum_probs=16.2
Q ss_pred ceEEEEeCChhhHHHHHHcccc
Q 045882 765 DFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 765 d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+.+++.++...+-++|..+-..
T Consensus 121 ~~i~~~~~~~~kp~~~~~a~~~ 142 (197)
T PHA02597 121 SEVLMCGHDESKEKLFIKAKEK 142 (197)
T ss_pred cEEEEeccCcccHHHHHHHHHH
Confidence 5677888877788888876543
No 319
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=66.03 E-value=11 Score=36.40 Aligned_cols=38 Identities=24% Similarity=0.319 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+..+.+.+++.+ |++++.++.|||+..|+.+-+.+|.
T Consensus 134 p~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 134 PDPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp TSHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCC
Confidence 4457889999998 9999999999999999999999986
No 320
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=65.13 E-value=7.5 Score=42.02 Aligned_cols=43 Identities=16% Similarity=0.274 Sum_probs=32.7
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccC---CCeEEEEc
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDS---NNTTFIVS 623 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~---g~~V~I~S 623 (832)
.+.--|+||+||.|+. .+.+-+...++|+.|..++ ++.+++.|
T Consensus 33 ~~~fgfafDIDGVL~R----G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFR----GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCceeEEEecccEEEe----cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 3456899999999997 5667788999999995433 56666665
No 321
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=63.13 E-value=9.1 Score=36.78 Aligned_cols=27 Identities=30% Similarity=0.388 Sum_probs=18.4
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhcc
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGD 614 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 614 (832)
+|+||+||||++. . +....++++..++
T Consensus 1 ~iifD~DGTL~d~---~----~~~~~~~~~~~~~ 27 (154)
T TIGR01549 1 AILFDIDGTLVDS---S----FAIRRAFEETLEE 27 (154)
T ss_pred CeEecCCCccccc---H----HHHHHHHHHHHHH
Confidence 4799999999982 1 3555566666543
No 322
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=62.87 E-value=7.8 Score=36.36 Aligned_cols=38 Identities=21% Similarity=0.170 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHhhhhCC-CCcceEEEEeC-ChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDG-KLPDFVLCVGD-DRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~g-i~~d~vl~~GD-d~ND~~Mf~~a~~ 785 (832)
.|....+.+++.+ + ++++++++||| ..+|+.+-+.+|.
T Consensus 86 P~~~~~~~~~~~~---~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 86 PKPGMFLEALKRF---NEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CChHHHHHHHHHc---CCCChhheEEEcCCCcccHHHHHHCCC
Confidence 4677888999887 6 89999999999 7999999999886
No 323
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=62.69 E-value=6.2 Score=43.77 Aligned_cols=48 Identities=23% Similarity=0.360 Sum_probs=35.2
Q ss_pred ccCcEEEEEecCCCcCCCCC--------CC-CCCCHHHHHHHHHhhccCCCeEEEEcC
Q 045882 576 RTSRRAIFLDYDGTVVPHHA--------LI-KKPSRDVIYVLRELCGDSNNTTFIVSG 624 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~--------~~-~~~s~~~~~~L~~L~~d~g~~V~I~SG 624 (832)
+-..|++.|||||||+...+ .+ ..+-++.-+-|+.| .++|+.++|.|-
T Consensus 72 ~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl-~~~g~~l~iftn 128 (422)
T KOG2134|consen 72 NGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTL-YQDGIKLFIFTN 128 (422)
T ss_pred CCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhh-ccCCeEEEEEec
Confidence 44579999999999998543 11 12345666778888 578999999874
No 324
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=62.44 E-value=17 Score=37.15 Aligned_cols=14 Identities=21% Similarity=0.584 Sum_probs=12.7
Q ss_pred cEEEEEecCCCcCC
Q 045882 579 RRAIFLDYDGTVVP 592 (832)
Q Consensus 579 ~rlI~lD~DGTLl~ 592 (832)
.|+++||+||||++
T Consensus 1 ~k~viFD~DGTL~d 14 (224)
T TIGR02254 1 YKTLLFDLDDTILD 14 (224)
T ss_pred CCEEEEcCcCcccc
Confidence 37899999999998
No 325
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=61.82 E-value=4.8 Score=45.06 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=42.5
Q ss_pred ccCcEEEEEecCCCcCCCCCC-------CC-CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCCCceEEEeCC
Q 045882 576 RTSRRAIFLDYDGTVVPHHAL-------IK-KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCENLGIAAEHG 647 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~~-------~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~~l~liaenG 647 (832)
+...+++++|+|||++....- .+ .-+..+.+...+. ..+|..|.-.|.|+.-.+..--. -+..|++||
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI-~rNGYkI~YltsR~~Gqa~sTrs---ylrnieQng 447 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDI-DRNGYKIKYLTSRSYGQADSTRS---YLRNIEQNG 447 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhh-ccCceEEEEEecccccchhhhhh---HHHhhhhcC
Confidence 467899999999999973210 11 1233445555566 35678888889898764432211 123455566
Q ss_pred EEE
Q 045882 648 YYL 650 (832)
Q Consensus 648 a~i 650 (832)
+.+
T Consensus 448 ykL 450 (580)
T COG5083 448 YKL 450 (580)
T ss_pred ccC
Confidence 544
No 326
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=61.33 E-value=49 Score=41.23 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=49.5
Q ss_pred CCHHHHHHHhhccCcEEEEEecC----CCcCCC--CC---------------CCCCCCHHHHHHHHHhhccCCCeEEEEc
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYD----GTVVPH--HA---------------LIKKPSRDVIYVLRELCGDSNNTTFIVS 623 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~D----GTLl~~--~~---------------~~~~~s~~~~~~L~~L~~d~g~~V~I~S 623 (832)
-+.+.+++.|....-|+|++-.- +||..- -+ ...+.-+++...|++| ++.+++.+.+|
T Consensus 650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL-~~AnIRtVMcT 728 (1140)
T KOG0208|consen 650 ADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDEL-NRANIRTVMCT 728 (1140)
T ss_pred ccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHH-HhhcceEEEEc
Confidence 57778888888888888887532 122110 00 0234567788888888 67899999999
Q ss_pred CCChhhHHHHhcCC
Q 045882 624 GRGKVSLGEWLAPC 637 (832)
Q Consensus 624 GR~~~~l~~~~~~l 637 (832)
|-+.-.....-+++
T Consensus 729 GDNllTaisVakeC 742 (1140)
T KOG0208|consen 729 GDNLLTAISVAKEC 742 (1140)
T ss_pred CCchheeeehhhcc
Confidence 99887666555544
No 327
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=60.11 E-value=6.8 Score=40.84 Aligned_cols=53 Identities=23% Similarity=0.352 Sum_probs=40.3
Q ss_pred ccCcEEEEEecCCCcCCCCC-------C----------------CCCCCHHHHHHHHHhhccCCCeEEEEcCCChhh
Q 045882 576 RTSRRAIFLDYDGTVVPHHA-------L----------------IKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVS 629 (832)
Q Consensus 576 ~s~~rlI~lD~DGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 629 (832)
+.|.+.|++|+|-|+++..+ + ..++-+...+.|+-. ..+|..|+.+|-|..+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yv-n~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYV-NSNGGKIFYISNRDQEN 151 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHH-HhcCcEEEEEeccchhc
Confidence 45677999999999998432 0 113346778888887 68899999999999876
No 328
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=59.10 E-value=11 Score=37.24 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=20.3
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCC
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNN 617 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~ 617 (832)
.|+|+||+||||++. . +....+++++.++-|.
T Consensus 1 ~~~iiFD~DGTL~ds---~----~~~~~~~~~~~~~~g~ 32 (185)
T TIGR02009 1 YKAVIFDMDGVIVDT---A----PLHAQAWKHLADKYGI 32 (185)
T ss_pred CCeEEEcCCCcccCC---h----HHHHHHHHHHHHHcCC
Confidence 378999999999992 2 2334455555444343
No 329
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=58.82 E-value=3.6 Score=40.62 Aligned_cols=32 Identities=34% Similarity=0.268 Sum_probs=25.4
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHH
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~ 781 (832)
-.....+++.+ |++++++++|||+..|+..-+
T Consensus 142 p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~ 173 (175)
T TIGR01493 142 PVVYELVFDTV---GLPPDRVLMVAAHQWDLIGAR 173 (175)
T ss_pred HHHHHHHHHHH---CCCHHHeEeEecChhhHHHHh
Confidence 34456677777 999999999999999987543
No 330
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=58.74 E-value=7.4 Score=36.71 Aligned_cols=49 Identities=24% Similarity=0.062 Sum_probs=40.1
Q ss_pred EEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 582 IFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 582 I~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
.+.++++|+.. ..+.-+++.+.|+.| .+- +.|+|+||-.+.++.+..+-
T Consensus 17 ~~~~v~~tiat----gGklf~ev~e~iqeL-~d~-V~i~IASgDr~gsl~~lae~ 65 (152)
T COG4087 17 KAGKVLYTIAT----GGKLFSEVSETIQEL-HDM-VDIYIASGDRKGSLVQLAEF 65 (152)
T ss_pred ecceEEEEEcc----CcEEcHhhHHHHHHH-HHh-heEEEecCCcchHHHHHHHH
Confidence 35688999987 556667889999999 565 99999999999999887753
No 331
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=58.72 E-value=12 Score=44.16 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=52.1
Q ss_pred cCcEEEEEecCCCcCCCCC-------CCCCC-CHHHHHHHHHhhccCCCeEEEEcCCChh---hHHHHhcCCCCceEEEe
Q 045882 577 TSRRAIFLDYDGTVVPHHA-------LIKKP-SRDVIYVLRELCGDSNNTTFIVSGRGKV---SLGEWLAPCENLGIAAE 645 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~-------~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~l~~l~liae 645 (832)
-..|+|+.|+|||++.... ..+.- ...+.++..+. +++|.+++.+|.|..- ..+.++..+...|.+.-
T Consensus 528 Wn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~I-k~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LP 606 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKI-KENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLP 606 (738)
T ss_pred cCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHH-HhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCC
Confidence 3568999999999997321 11222 34566666777 6889999999999865 34456666555666666
Q ss_pred CCEEEEeCC
Q 045882 646 HGYYLRWTK 654 (832)
Q Consensus 646 nGa~i~~~~ 654 (832)
.|=+|..+.
T Consensus 607 dGPViLSPd 615 (738)
T KOG2116|consen 607 DGPVILSPD 615 (738)
T ss_pred CCCEEeCCC
Confidence 666666554
No 332
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=57.25 E-value=2e+02 Score=35.25 Aligned_cols=136 Identities=13% Similarity=0.110 Sum_probs=74.4
Q ss_pred CCEEEEEeccccccCCHHHH-HHHHHHH--HHhCCCccC-cEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISLK-LLAMEQL--LKVHPELQG-KLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~-l~A~~~l--l~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+...++.+-|+..-|=..+. |.-+.++ +++.|+... .+++|..|-..-++.. -.++-+.|.++++.||..-...+
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~-gK~iIk~I~~va~~in~Dp~v~~ 521 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYM-GKEIIKLINNVAEVINNDPEVGD 521 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HH-HHHHHHHHHHHHHHHCT-TTTCC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHHhcChhhcc
Confidence 45678899999999977663 3333333 345665432 4666666644322222 23556677777788886543334
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL 488 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l 488 (832)
.-.|+|+. ..+..--..++.++||-..+|.+ ++|| |++. +|.-+. .|.+.+|..-|+--++
T Consensus 522 ~lkVvFle-nYdvslA~~lipg~DVwln~p~~------p~EA--SGTS--gMK~~~--------NGaL~lstlDG~niEi 582 (713)
T PF00343_consen 522 RLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTR------PKEA--SGTS--GMKAAM--------NGALNLSTLDGWNIEI 582 (713)
T ss_dssp GEEEEEET-T-SHHHHHHHGGG-SEEEE---T------TSSS--S-SH--HHHHHH--------TT-EEEEESSTCHHHH
T ss_pred ceeEEeec-CCcHHHHHHHhhhhhhhhhCCCC------Cccc--cCCC--cchhhc--------CCCeEEecccchhHHH
Confidence 45688876 45566666889999999999863 4453 3221 122222 3678888888875554
No 333
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=56.51 E-value=28 Score=36.41 Aligned_cols=15 Identities=27% Similarity=0.317 Sum_probs=13.8
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
+.|+|+||+||||++
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 468999999999999
No 334
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=54.72 E-value=1.2e+02 Score=35.95 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=72.5
Q ss_pred EEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 045882 335 KVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVIL 414 (832)
Q Consensus 335 ~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~ 414 (832)
.|+++.. -++|=.++.+.-.-++|+.-|+-. |++-+.+ +.++..+.+++++++- |. +..-++|
T Consensus 431 vVf~c~~--n~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~----Gv-~~eRL~f 493 (620)
T COG3914 431 VVFCCFN--NYFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAERE----GV-DSERLRF 493 (620)
T ss_pred EEEEecC--CcccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHc----CC-Chhheee
Confidence 3444444 467888899999999999999864 7666643 3345667777777664 32 3344555
Q ss_pred ecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeee
Q 045882 415 IDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICR 454 (832)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~ 454 (832)
..+.+.++-.+.|..||+++-|=-+-| ..++.|++..+
T Consensus 494 -~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm~ 531 (620)
T COG3914 494 -LPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWMG 531 (620)
T ss_pred -cCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHhc
Confidence 447888899999999999998876655 57788998873
No 335
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=54.25 E-value=5.9 Score=46.06 Aligned_cols=30 Identities=23% Similarity=0.235 Sum_probs=19.1
Q ss_pred cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHh
Q 045882 579 RRAIFLDYDGTVVPHHALIKKPSRDVIYVLREL 611 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L 611 (832)
.+.++||+||||++ ..........++++++
T Consensus 241 ~k~vIFDlDGTLiD---s~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 241 LQALIFDMDGTLFQ---TDKILELSLDDTFDHL 270 (459)
T ss_pred hhheeEccCCceec---chhHHHHHHHHHHHHH
Confidence 37899999999998 3333333334444443
No 336
>PRK14986 glycogen phosphorylase; Provisional
Probab=53.46 E-value=2e+02 Score=35.85 Aligned_cols=136 Identities=13% Similarity=0.070 Sum_probs=87.2
Q ss_pred CCEEEEEeccccccCCHHH-HHHHHHHHH--HhCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISL-KLLAMEQLL--KVHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+-..++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-..-++.. -.++-+.|.++++-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhccChhhcC
Confidence 3467888999999998877 777777663 4566532 34667767655533322 23566778888888886543345
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL 488 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l 488 (832)
.-.|+|+. .....--..++.+|||-..+|. .++|| |++++ |.-++ .|+|-+|..=|.-.++
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~EA--SGTsn--MK~al--------NGaLtlgtlDG~nvEi 681 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTEA--SGTSN--MKFAL--------NGALTIGTLDGANVEM 681 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCccc--cCcch--hhHHh--------cCceeeeccCCchhHH
Confidence 55688876 3455555678999999888885 45563 33321 22222 3667777777755554
No 337
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=52.88 E-value=7.5 Score=39.69 Aligned_cols=36 Identities=14% Similarity=0.165 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
......+++.+ |++++++++|||...|+.+-+.+|.
T Consensus 155 p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 155 PRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 44677788888 9999999999999999999999885
No 338
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=52.80 E-value=25 Score=34.55 Aligned_cols=36 Identities=17% Similarity=0.154 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 747 GLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 747 G~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
....+.+++.+ |++++.+++|||+..|+.+-+.+|.
T Consensus 143 ~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 56778888888 9999999999999999999988875
No 339
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.74 E-value=37 Score=37.88 Aligned_cols=114 Identities=12% Similarity=0.150 Sum_probs=74.0
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceeccc---ccCC---CCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccc
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAV---RDGM---NLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCS 485 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~---~EGm---nLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s 485 (832)
+.+++.-.+...+...|+.-|+.+.=+. -+|. +.-..|+++| +|+++.+--.|.-
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc-------------------~~~liT~~~~~~e 299 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC-------------------GGFLITDYWKDLE 299 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc-------------------CCccccccHHHHH
Confidence 4444444444777788888887764443 2333 7888999999 4566666555544
Q ss_pred ccC-CC-ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh-hcCCHHHHHHHHHHHHHH
Q 045882 486 PSL-SG-AIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYI-CSHDVAYWAHSFMQDLER 546 (832)
Q Consensus 486 ~~l-~~-a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (832)
.-+ .| .++| -.|..++.+.+...+.-+ .||++..+..++.| ..|+...=+..++..+..
T Consensus 300 ~~f~pgk~~iv-~~d~kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 300 KFFKPGKDIIV-YQDSKDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HhcCCchheEE-ecCHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 444 33 3444 578999999999999854 45566666666555 447766666666666654
No 340
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=51.49 E-value=22 Score=35.32 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=22.2
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNN 617 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~ 617 (832)
++.++++||+||||++. . +...++++++.++-|.
T Consensus 3 ~~~~~viFD~DGTLiDs---~----~~~~~a~~~~~~~~g~ 36 (188)
T PRK10725 3 DRYAGLIFDMDGTILDT---E----PTHRKAWREVLGRYGL 36 (188)
T ss_pred CcceEEEEcCCCcCccC---H----HHHHHHHHHHHHHcCC
Confidence 34689999999999982 2 2344555555444444
No 341
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=50.89 E-value=21 Score=33.34 Aligned_cols=40 Identities=18% Similarity=0.303 Sum_probs=29.9
Q ss_pred HHHHHHhCCCCCEEEEeCccc-ccHHHHHHhhcCCCeEEEEec
Q 045882 189 DKIMEVINPEEDYVWIHDYHL-MVLPTFLRRRFHRVKLGFFLH 230 (832)
Q Consensus 189 ~~v~~~~~~~~d~vwvhDyhl-~llp~~lr~~~~~~~ig~flH 230 (832)
.++++..+| |+|++|...- .+++.++++.....++.+..|
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 455666677 9999999876 566666666555589999999
No 342
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=50.73 E-value=71 Score=34.95 Aligned_cols=99 Identities=16% Similarity=0.153 Sum_probs=65.4
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCCCccCcEEEEE-EecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHPELQGKLVLVQ-IVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
++..|+-=..=|++-.+...|.++.+.+.. ++.++. .+.|+ ++ +++.++|.+...+ .||. ..
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn----~~Yi~~V~~~~~~---lF~~---~~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN----QAYIEEVRQAGLA---LFGA---EN 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC----HHHHHHHHHHHHH---hcCc---cc
Confidence 344444445678888888888888766432 222332 23332 22 4566676666554 4553 24
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceeccc-ccCCCCcce
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAV-RDGMNLMPY 448 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~-~EGmnLv~~ 448 (832)
+..+++.++.+|+.++++.+|+.++.-- ..|+|..++
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~l 245 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCL 245 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHH
Confidence 7778899999999999999999998875 588887754
No 343
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=50.61 E-value=24 Score=43.57 Aligned_cols=67 Identities=24% Similarity=0.295 Sum_probs=0.0
Q ss_pred EEEEEeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC----cccccc
Q 045882 736 IVEVKPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ----KPSKAR 811 (832)
Q Consensus 736 ~vEV~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~----~~s~A~ 811 (832)
+-|+.|.+ |..-++.|.+. + .-|..+||+.||-+.|..++ +++++|. +...|+
T Consensus 766 ~aev~P~~--K~~~Ik~lq~~----~---~~VaMVGDGINDaPALA~Ad--------------VGIaig~gs~vAieaAD 822 (951)
T KOG0207|consen 766 YAEVLPEQ--KAEKIKEIQKN----G---GPVAMVGDGINDAPALAQAD--------------VGIAIGAGSDVAIEAAD 822 (951)
T ss_pred EeccCchh--hHHHHHHHHhc----C---CcEEEEeCCCCccHHHHhhc--------------cceeeccccHHHHhhCC
Q ss_pred eEe--CChhHHHHHHH
Q 045882 812 YYL--DDEEDVLALLK 825 (832)
Q Consensus 812 y~l--~~~~eV~~~L~ 825 (832)
.++ ++-.+|...+.
T Consensus 823 IVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 823 IVLMRNDLRDVPFAID 838 (951)
T ss_pred EEEEccchhhhHHHHH
No 344
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=50.61 E-value=2.7e+02 Score=31.35 Aligned_cols=90 Identities=12% Similarity=0.130 Sum_probs=52.1
Q ss_pred HHHHHHHHHhCCCccCcEEEEEEecCCC--CChhHHHHHHHHHHHHHHHHhccc-CCCCcccEEEec-CCCCHHHHHHHH
Q 045882 353 LLAMEQLLKVHPELQGKLVLVQIVNPAR--STGKDVQDAKLETYTITKRINETY-GVPGYEPVILID-RPVPLHEKTAYY 428 (832)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r--~~~~~~~~l~~ev~~lv~~iN~~~-~~~~~~pv~~~~-~~v~~~el~aly 428 (832)
+.++|+-+.. +++.+.+.++|.- |+.-..++| ..+.+++.+-|..- ...-+.++++.+ .+++..-+..-+
T Consensus 147 ~~~LE~~~~~-----~~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~ 220 (388)
T COG1168 147 FDALEKAFVD-----ERVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF 220 (388)
T ss_pred HHHHHHHHhc-----CCccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh
Confidence 4555544432 3456888888753 444444444 35566666655442 224566777765 566666555544
Q ss_pred HhcCcceecccccCCCCccee
Q 045882 429 ALAECCIVNAVRDGMNLMPYK 449 (832)
Q Consensus 429 ~~ADv~vvtS~~EGmnLv~~E 449 (832)
+-.++.++|-.-+|||.-+.
T Consensus 221 -a~~~it~~saSKtFNlaGL~ 240 (388)
T COG1168 221 -ADNSITLTSASKTFNLAGLK 240 (388)
T ss_pred -hcceEEEeeccccccchhhh
Confidence 33455667778888887554
No 345
>PLN02811 hydrolase
Probab=50.57 E-value=27 Score=35.98 Aligned_cols=38 Identities=13% Similarity=-0.000 Sum_probs=28.8
Q ss_pred HHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 748 LVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 748 ~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
......++.+...|+.++++++|||+..|+.+-+.+|.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~ 178 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGM 178 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCC
Confidence 34555566651113889999999999999999999986
No 346
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=49.65 E-value=9.8 Score=39.12 Aligned_cols=17 Identities=35% Similarity=0.589 Sum_probs=14.8
Q ss_pred cCcEEEEEecCCCcCCC
Q 045882 577 TSRRAIFLDYDGTVVPH 593 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~ 593 (832)
+..|.|+||+||||++.
T Consensus 2 ~~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 2 MMIKAILFDLDGTLLDF 18 (229)
T ss_pred CceeEEEEecCCccccc
Confidence 45789999999999983
No 347
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=49.10 E-value=2e+02 Score=29.73 Aligned_cols=48 Identities=29% Similarity=0.290 Sum_probs=28.9
Q ss_pred ceEEeccCccccccCC--C---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 045882 474 SMLVISEFIGCSPSLS--G---AIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHY 525 (832)
Q Consensus 474 g~lV~Se~~G~s~~l~--~---a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~ 525 (832)
+|++.-|-+|+.--+. | .+-|+|.+--++|.||+-- -+|.++|.++..
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlS----MEEer~rQe~aa 238 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLS----MEEERARQERAA 238 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhh----HHHHHHHHHHHh
Confidence 4555555555444442 1 3668898888999988743 345556655443
No 348
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=48.97 E-value=20 Score=36.15 Aligned_cols=12 Identities=42% Similarity=0.725 Sum_probs=11.2
Q ss_pred EEEEecCCCcCC
Q 045882 581 AIFLDYDGTVVP 592 (832)
Q Consensus 581 lI~lD~DGTLl~ 592 (832)
+|+||+||||++
T Consensus 2 ~viFD~DGTLiD 13 (197)
T TIGR01548 2 ALVLDMDGVMAD 13 (197)
T ss_pred ceEEecCceEEe
Confidence 689999999998
No 349
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=47.57 E-value=14 Score=39.84 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=40.0
Q ss_pred cCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 577 TSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 577 s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
.+.-.++||-||.|.. ...+-|.+.++|+.| +..|-.++++|-.+..+.+.+++.+
T Consensus 20 ~~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L-~~~gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWL----GEKPIPGSPEALNLL-KSLGKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred hhcCEEEEcCCcceee----cCCCCCChHHHHHHH-HHcCCcEEEEeCCCcchHHHHHHHH
Confidence 3456899999999997 334445666677777 4557889999888777766666543
No 350
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=46.71 E-value=18 Score=37.22 Aligned_cols=15 Identities=47% Similarity=0.782 Sum_probs=13.8
Q ss_pred CcEEEEEecCCCcCC
Q 045882 578 SRRAIFLDYDGTVVP 592 (832)
Q Consensus 578 ~~rlI~lD~DGTLl~ 592 (832)
+.|+++||+||||++
T Consensus 3 ~~~~viFD~DGTL~d 17 (221)
T PRK10563 3 QIEAVFFDCDGTLVD 17 (221)
T ss_pred CCCEEEECCCCCCCC
Confidence 468999999999998
No 351
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=46.04 E-value=82 Score=34.44 Aligned_cols=56 Identities=18% Similarity=0.116 Sum_probs=34.5
Q ss_pred CCHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCC
Q 045882 565 LSVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGR 625 (832)
Q Consensus 565 l~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 625 (832)
++..-+....++...+..++|+.|-... ...+..+...+.+..+ ++...|.|+||-
T Consensus 143 ~Sa~l~a~~L~~~Gi~A~~vD~~~~~~~---~~~t~~~~i~~~~~~~--~~~~~v~IvtGF 198 (304)
T cd04248 143 HSAFNTALLLQNRGVNARFVDLSGWRDS---GDMTLDERISEAFRDI--DPRDELPIVTGY 198 (304)
T ss_pred HHHHHHHHHHHHCCCCeEEECccccccc---CCCCcHHHHHHHHHhh--ccCCcEEEeCCc
Confidence 4555555555666788999998875432 1222345555666654 235578999984
No 352
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=45.93 E-value=51 Score=29.84 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQ 387 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~ 387 (832)
..|...++++++.+|+.+ +|.||.....+-+-|.
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~ 82 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYA 82 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHH
Confidence 578999999999999988 8999976655543343
No 353
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=45.86 E-value=51 Score=34.49 Aligned_cols=62 Identities=13% Similarity=0.157 Sum_probs=41.7
Q ss_pred CHHHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC-CChhhHHHHhc
Q 045882 566 SVDRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG-RGKVSLGEWLA 635 (832)
Q Consensus 566 ~~~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~~~~~ 635 (832)
+...+++.|.+.-..+++.|+|||+... +...+.++++++..+.+|.+.-| |+.+.+++++.
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~--------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGK--------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCC--------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 6667778887666679999999998652 12355666665544555554444 56778887775
No 354
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=45.48 E-value=27 Score=35.30 Aligned_cols=38 Identities=11% Similarity=0.145 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
.+....+.+++.+ |++|+++++|||+..|+..-+.+|.
T Consensus 142 P~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 142 PEARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CCHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 3466778888888 9999999999999999888888775
No 355
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=45.08 E-value=32 Score=32.34 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHhhhhCC--CCcceEEEEeCChhhHHHHH
Q 045882 745 TKGLVAEKVLSTMISDG--KLPDFVLCVGDDRSDEDMFE 781 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~g--i~~d~vl~~GDd~ND~~Mf~ 781 (832)
.|......+++++ | +.++++++|||+..|.+-++
T Consensus 90 pkp~~~~~a~~~l---g~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 90 PKSPRLVEIALKL---NGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred cHHHHHHHHHHHh---cCCCCcceEEEECCCHhHHHHHH
Confidence 5888999999999 9 99999999999999865443
No 356
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=44.71 E-value=25 Score=35.54 Aligned_cols=13 Identities=31% Similarity=0.460 Sum_probs=12.1
Q ss_pred EEEEEecCCCcCC
Q 045882 580 RAIFLDYDGTVVP 592 (832)
Q Consensus 580 rlI~lD~DGTLl~ 592 (832)
|+|+||+||||++
T Consensus 1 k~viFDlDGTL~d 13 (203)
T TIGR02252 1 KLITFDAVGTLLA 13 (203)
T ss_pred CeEEEecCCceee
Confidence 5799999999998
No 357
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=43.16 E-value=35 Score=33.82 Aligned_cols=38 Identities=21% Similarity=0.156 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCCh-hhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDR-SDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~-ND~~Mf~~a~~ 785 (832)
.+......+++.+ |++++++++|||+. +|+..=+.+|.
T Consensus 92 P~p~~~~~~l~~~---~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 92 PPGCAFRRAHPEM---GLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred CChHHHHHHHHHc---CCCHHHEEEECCcchHHHHHHHHcCC
Confidence 4566888888888 99999999999997 79998888875
No 358
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=42.79 E-value=40 Score=35.12 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 746 KGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 746 KG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
+......+++.+ |+++++++++||+..|+..-+.+|..
T Consensus 154 ~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 154 EAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred CHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 556778888888 99999999999999999999998863
No 359
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=41.91 E-value=14 Score=36.81 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHH
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFE 781 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~ 781 (832)
+|..+++.+...... +...+.++++||+.||.+||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999221111 456789999999999999996
No 360
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=41.67 E-value=45 Score=36.05 Aligned_cols=40 Identities=23% Similarity=0.237 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHhhhhCCC-CcceEEEEeCChhhHHHHHHcccc
Q 045882 744 VTKGLVAEKVLSTMISDGK-LPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 744 vnKG~al~~Ll~~l~~~gi-~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
-.+.......++.+ +. .++.+++|||+.+|+.+-+.+|..
T Consensus 251 kp~p~~~~~~l~~~---~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 251 RPDDVVKEEIFWEK---IAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred CCcHHHHHHHHHHH---hccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 33444566666665 66 579999999999999999999863
No 361
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=39.73 E-value=30 Score=33.02 Aligned_cols=52 Identities=13% Similarity=0.180 Sum_probs=33.1
Q ss_pred EEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCC--hhhHHHHhc
Q 045882 580 RAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRG--KVSLGEWLA 635 (832)
Q Consensus 580 rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--~~~l~~~~~ 635 (832)
-+-++|+||.++.-.+....-..++++.|.+ .|..|+|+|--. ...++++-.
T Consensus 44 giAildL~G~~l~l~S~R~~~~~evi~~I~~----~G~PviVAtDV~p~P~~V~Kia~ 97 (138)
T PF04312_consen 44 GIAILDLDGELLDLKSSRNMSRSEVIEWISE----YGKPVIVATDVSPPPETVKKIAR 97 (138)
T ss_pred EEEEEecCCcEEEEEeecCCCHHHHHHHHHH----cCCEEEEEecCCCCcHHHHHHHH
Confidence 3567899999997543222233555655544 499999999764 345555444
No 362
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=38.99 E-value=10 Score=38.30 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=28.9
Q ss_pred HHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 749 VAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 749 al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
.+..+++.+ +..+..|+++||+.||..|++.|+
T Consensus 183 ~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 557777777 888899999999999999999885
No 363
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=38.94 E-value=38 Score=33.61 Aligned_cols=12 Identities=42% Similarity=0.775 Sum_probs=11.2
Q ss_pred EEEEecCCCcCC
Q 045882 581 AIFLDYDGTVVP 592 (832)
Q Consensus 581 lI~lD~DGTLl~ 592 (832)
+++||+||||++
T Consensus 2 ~viFDlDGTL~d 13 (184)
T TIGR01993 2 VWFFDLDNTLYP 13 (184)
T ss_pred eEEEeCCCCCCC
Confidence 689999999998
No 364
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=38.78 E-value=74 Score=32.26 Aligned_cols=14 Identities=29% Similarity=0.869 Sum_probs=12.8
Q ss_pred cEEEEEecCCCcCC
Q 045882 579 RRAIFLDYDGTVVP 592 (832)
Q Consensus 579 ~rlI~lD~DGTLl~ 592 (832)
.|.|+||+||||++
T Consensus 2 ik~viFDldGtL~d 15 (211)
T TIGR02247 2 IKAVIFDFGGVLLP 15 (211)
T ss_pred ceEEEEecCCceec
Confidence 46899999999998
No 365
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=38.62 E-value=2.1e+02 Score=30.58 Aligned_cols=51 Identities=20% Similarity=0.325 Sum_probs=36.4
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEecCCCCChhhhhcCCchHHHHHHHHhCCEEeecChhhHH
Q 045882 200 DYVWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYRTLPVRNEILKALLNADLIGFHTFDYAR 267 (832)
Q Consensus 200 d~vwvhDyhl~llp~~lr~~~~~~~ig~flH~PfP~~e~~r~lp~r~~il~~ll~~dligf~t~~~~~ 267 (832)
|++.--.....++...|++.+...++.--+| |.- |.+ ..|+|..--.|+.+
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~---Prl------p~~--------~fDlvivp~HD~~~ 122 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD---PRL------PYN--------HFDLVIVPYHDWRE 122 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC---CCC------Ccc--------cceEEeccchhhhh
Confidence 7888899999999999999998866655444 432 221 36777766666654
No 366
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=37.85 E-value=1.7e+02 Score=27.79 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 045882 351 LKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~ 430 (832)
..+.++..+.+++. +..+.||.|-..+|.. .+....+.+.++++..+|+ -||.++.+..+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 45677777887764 2367799887666554 3456678888888888875 479999999988888877776
Q ss_pred c
Q 045882 431 A 431 (832)
Q Consensus 431 A 431 (832)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 367
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=37.03 E-value=3.9e+02 Score=33.38 Aligned_cols=105 Identities=11% Similarity=-0.014 Sum_probs=71.4
Q ss_pred CCEEEEEeccccccCCHHH-HHHHHHHHH--HhCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISL-KLLAMEQLL--KVHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+...++.+-|+..-|-..+ .|.-++++. ..+|+.. ..+++|..|-.+-++.. -.++-+.|..+++.||..-...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYM-AKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHhccChhcCC
Confidence 4567889999999998777 666666553 3566532 34667766655533322 23566788888888887654455
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceeccc
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAV 439 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~ 439 (832)
+-.|+|+.. ....--..++.+|||-..+|+
T Consensus 608 ~lkVVFlen-Y~VslAe~iipaaDvseqis~ 637 (797)
T cd04300 608 KLKVVFLPN-YNVSLAEKIIPAADLSEQIST 637 (797)
T ss_pred ceEEEEeCC-CChHHHHHhhhhhhhhhhCCC
Confidence 566888863 445555578999999887774
No 368
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=36.17 E-value=37 Score=39.85 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
.|...++ +.+ |.+... ++.||+.||.+||+.+++.
T Consensus 176 ~Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 176 HKRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred HHHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCCcc
Confidence 3666665 333 433333 8999999999999999864
No 369
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=33.87 E-value=5.7e+02 Score=26.73 Aligned_cols=62 Identities=16% Similarity=0.227 Sum_probs=43.9
Q ss_pred CHHHHHHHhhc-c-CcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC-CChhhHHHHhc
Q 045882 566 SVDRIVDAYKR-T-SRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG-RGKVSLGEWLA 635 (832)
Q Consensus 566 ~~~~i~~~y~~-s-~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~~~~~ 635 (832)
+...+++.|.. . -+.+.++|+||+.-. .+...+.|+++++..+.+|.+--| |+.+.+++++.
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~--------~~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~~~l~ 96 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQ--------HAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFA 96 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccC--------CcchHHHHHHHHhhcCCeEEEcCCcCCHHHHHHHHH
Confidence 55568888887 3 489999999999654 234566777776655666555544 67778888885
No 370
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=33.84 E-value=24 Score=34.05 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=24.5
Q ss_pred HHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcc
Q 045882 751 EKVLSTMISDGKLPDFVLCVGDDRSDEDMFESIS 784 (832)
Q Consensus 751 ~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~ 784 (832)
.+.++.+ |.+++++++|||+.+|..+...++
T Consensus 105 ~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ng 135 (148)
T smart00577 105 VKDLSLL---GRDLSNVIIIDDSPDSWPFHPENL 135 (148)
T ss_pred eecHHHc---CCChhcEEEEECCHHHhhcCccCE
Confidence 3345666 899999999999999998765554
No 371
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=33.05 E-value=39 Score=33.10 Aligned_cols=25 Identities=28% Similarity=0.292 Sum_probs=16.9
Q ss_pred EEEEecCCCcCCCCCCCCCCCHHHHHHHHHhh
Q 045882 581 AIFLDYDGTVVPHHALIKKPSRDVIYVLRELC 612 (832)
Q Consensus 581 lI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~ 612 (832)
+|+||+||||++. . +...++++.+.
T Consensus 1 ~viFD~DGTL~D~---~----~~~~~~~~~~~ 25 (175)
T TIGR01493 1 AMVFDVYGTLVDV---H----GGVRACLAAIA 25 (175)
T ss_pred CeEEecCCcCccc---H----HHHHHHHHHhh
Confidence 4799999999983 1 24455555553
No 372
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=32.91 E-value=62 Score=30.51 Aligned_cols=56 Identities=16% Similarity=0.005 Sum_probs=37.4
Q ss_pred cEEEEEecCCCcCCCCCCCC------CCCHHHHHHHHHhhccCCCeEEEEcCCChh-hHHHHhc
Q 045882 579 RRAIFLDYDGTVVPHHALIK------KPSRDVIYVLRELCGDSNNTTFIVSGRGKV-SLGEWLA 635 (832)
Q Consensus 579 ~rlI~lD~DGTLl~~~~~~~------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~-~l~~~~~ 635 (832)
.+++.+|+|+|+-|...... ..-+.....|..| ++.|++.+++|--... .+...+.
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dL-k~~GVtl~~ASRt~ap~iA~q~L~ 80 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDL-KKLGVTLIHASRTMAPQIASQGLE 80 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHH-HhcCcEEEEecCCCCHHHHHHHHH
Confidence 47889999999998543211 1235667788888 6889999999865443 3333443
No 373
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=32.74 E-value=74 Score=31.82 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHhhhhC---CCCcceEEEEeCChhhHHHHHHccc
Q 045882 745 TKGLVAEKVLSTMISD---GKLPDFVLCVGDDRSDEDMFESISQ 785 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~---gi~~d~vl~~GDd~ND~~Mf~~a~~ 785 (832)
+|..-...+++.+... |++++++++|||+..|+..-+.+|.
T Consensus 108 ~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi 151 (174)
T TIGR01685 108 NKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGV 151 (174)
T ss_pred chHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCC
Confidence 4545555555554332 4899999999999999888777764
No 374
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=32.74 E-value=3.3e+02 Score=32.70 Aligned_cols=168 Identities=16% Similarity=0.125 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 350 SLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
+..|.-+.++|++-|+-+ |+...-|.-|+ +..+..++++ |... ..|+| ..-...+|=..-++
T Consensus 773 P~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~~--------Gl~p-~riif-s~va~k~eHvrr~~ 834 (966)
T KOG4626|consen 773 PSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQL--------GLEP-DRIIF-SPVAAKEEHVRRGQ 834 (966)
T ss_pred HHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHHh--------CCCc-cceee-ccccchHHHHHhhh
Confidence 567889999999999876 88888787554 2333333332 3210 11333 22334567777899
Q ss_pred hcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC-CC-ceEeCCCCHHHHHH-HH
Q 045882 430 LAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL-SG-AIRVNPWDIDAVAD-AL 506 (832)
Q Consensus 430 ~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l-~~-a~~VnP~d~~~~A~-ai 506 (832)
.||||+-|++.-|-- +-.|-+.++.|-..+ +|-..+|..++ |... -| +-+| ..+.++..+ |+
T Consensus 835 LaDv~LDTplcnGhT-Tg~dvLw~GvPmVTm------------pge~lAsrVa~-Sll~~~Gl~hli-ak~~eEY~~iaV 899 (966)
T KOG4626|consen 835 LADVCLDTPLCNGHT-TGMDVLWAGVPMVTM------------PGETLASRVAA-SLLTALGLGHLI-AKNREEYVQIAV 899 (966)
T ss_pred hhhhcccCcCcCCcc-cchhhhccCCceeec------------ccHHHHHHHHH-HHHHHcccHHHH-hhhHHHHHHHHH
Confidence 999999999987753 334555554431111 11122233322 1111 11 1122 234455444 33
Q ss_pred HHHhcCCHHHHHHHHHHHHhhhhc--CCHHHHHHHHHHHHHHHHHhh
Q 045882 507 HDAITMSDVEKQLRHEKHYRYICS--HDVAYWAHSFMQDLERACRDH 551 (832)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v~~--~~~~~W~~~~l~~l~~~~~~~ 551 (832)
.-+. .-+.-+..|++-....++. +|..+|+..+-+...+-++.+
T Consensus 900 ~Lat-d~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y 945 (966)
T KOG4626|consen 900 RLAT-DKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKY 945 (966)
T ss_pred Hhhc-CHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHh
Confidence 3332 2333444444443333443 788888886666555555544
No 375
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=32.11 E-value=5.7e+02 Score=27.30 Aligned_cols=59 Identities=24% Similarity=0.312 Sum_probs=35.0
Q ss_pred CCCEEEEEecccc-ccCCHHHHHHHHHHHHHhCCCccCcEEEEEEecCCC------CChhHHHHHHHHHHHHHHHHh
Q 045882 332 KGKKVIVGVDDMD-IFKGISLKLLAMEQLLKVHPELQGKLVLVQIVNPAR------STGKDVQDAKLETYTITKRIN 401 (832)
Q Consensus 332 ~~~~vil~VdRld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r------~~~~~~~~l~~ev~~lv~~iN 401 (832)
.|+..|++..+.. +.++ .|.+-++++.|+ +++|++|.- -...+.+.--+.++.++++-|
T Consensus 174 dg~~~i~faSDvqGp~~~-----~~l~~i~e~~P~------v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~ 239 (304)
T COG2248 174 DGKSSIVFASDVQGPIND-----EALEFILEKRPD------VLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETN 239 (304)
T ss_pred cCCeEEEEcccccCCCcc-----HHHHHHHhcCCC------EEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCc
Confidence 4677788888777 5554 467778899997 556666642 111222333344556666544
No 376
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=31.65 E-value=87 Score=34.51 Aligned_cols=49 Identities=22% Similarity=0.223 Sum_probs=35.3
Q ss_pred CcceEEEEeCCh-hhHHHHHHcccccCCCCCCCCCcEEEEEe--CC--c-----ccccceEeCChhHHHHHH
Q 045882 763 LPDFVLCVGDDR-SDEDMFESISQATYGSSLPIAPEIFACTV--GQ--K-----PSKARYYLDDEEDVLALL 824 (832)
Q Consensus 763 ~~d~vl~~GDd~-ND~~Mf~~a~~~~~~~~~~~~~~~f~v~v--G~--~-----~s~A~y~l~~~~eV~~~L 824 (832)
+++.+++|||+. +|+.+=+.+|.. +|-| |. . .-.++|++++..|+..+|
T Consensus 262 ~~~~~~mIGD~~~tDI~ga~~~G~~-------------silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 262 PFHALYMVGDNPASDIIGAQNYGWF-------------SCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred ChheEEEEcCChhhhhhhHHhCCce-------------EEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 458999999996 999998888763 3333 31 1 123678899988887765
No 377
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=30.51 E-value=2.5e+02 Score=26.94 Aligned_cols=71 Identities=18% Similarity=0.226 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 045882 352 KLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYALA 431 (832)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~~A 431 (832)
.+..+.++.++++ +..+.||.|-..+|.. .+....+.+.++++..+|+ .||+++.+..+..+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3566666777663 3478899887655543 3455677778888877774 4799999999888888777654
Q ss_pred C
Q 045882 432 E 432 (832)
Q Consensus 432 D 432 (832)
.
T Consensus 112 ~ 112 (138)
T PRK00109 112 G 112 (138)
T ss_pred C
Confidence 3
No 378
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=29.98 E-value=59 Score=36.44 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 743 GVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 743 gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
.-.|-..+..+++.+ ++.++++++|||+.+|+..-+.+|..
T Consensus 103 rKP~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 103 RKPKTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred CCCCHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 345566777888877 89999999999999999999888863
No 379
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=28.40 E-value=52 Score=32.62 Aligned_cols=34 Identities=26% Similarity=0.265 Sum_probs=27.6
Q ss_pred CCCCHHHHHHHHHHhhhhCCCCcceEEEEeCC-hhhHH
Q 045882 742 QGVTKGLVAEKVLSTMISDGKLPDFVLCVGDD-RSDED 778 (832)
Q Consensus 742 ~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd-~ND~~ 778 (832)
.+--=+.++++-++.| ++++++|+++||. .+|+-
T Consensus 91 A~KP~~~~fr~Al~~m---~l~~~~vvmVGDqL~TDVl 125 (175)
T COG2179 91 AKKPFGRAFRRALKEM---NLPPEEVVMVGDQLFTDVL 125 (175)
T ss_pred ccCccHHHHHHHHHHc---CCChhHEEEEcchhhhhhh
Confidence 3334477889999999 9999999999998 58864
No 380
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=28.32 E-value=50 Score=33.39 Aligned_cols=39 Identities=21% Similarity=0.128 Sum_probs=32.4
Q ss_pred CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 599 KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 599 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+-+.+.++|++| ++.|+.++|+||.+...+...+..++
T Consensus 75 ~~~~g~~~~L~~L-~~~g~~~~i~Sn~~~~~~~~~l~~~~ 113 (205)
T TIGR01454 75 EVFPGVPELLAEL-RADGVGTAIATGKSGPRARSLLEALG 113 (205)
T ss_pred ccCCCHHHHHHHH-HHCCCeEEEEeCCchHHHHHHHHHcC
Confidence 3557889999999 57799999999999998888777654
No 381
>PRK11590 hypothetical protein; Provisional
Probab=27.93 E-value=68 Score=32.86 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=33.8
Q ss_pred HHHHHHH-HHhhccCCCeEEEEcCCChhhHHHHhcCCC---CceEEEeC
Q 045882 602 RDVIYVL-RELCGDSNNTTFIVSGRGKVSLGEWLAPCE---NLGIAAEH 646 (832)
Q Consensus 602 ~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---~l~liaen 646 (832)
+.+.+.| +.| ++.|..++|+|+.+...+++++..++ ...++|..
T Consensus 98 pga~e~L~~~l-~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~ 145 (211)
T PRK11590 98 PVVQERLTTYL-LSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQ 145 (211)
T ss_pred ccHHHHHHHHH-HhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEE
Confidence 5778888 456 56799999999999999998887655 35566543
No 382
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=27.55 E-value=87 Score=38.64 Aligned_cols=65 Identities=14% Similarity=0.265 Sum_probs=45.0
Q ss_pred EeCCCCHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCC-----cccccceEe
Q 045882 740 KPQGVTKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQ-----KPSKARYYL 814 (832)
Q Consensus 740 ~p~gvnKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~-----~~s~A~y~l 814 (832)
+....+|-.-++-|.+. -+=|.+-||+.||-+.|+.|+- +.+||- ++..++.++
T Consensus 721 RSSP~DK~lLVk~L~~~-------g~VVAVTGDGTNDaPALkeADV--------------GlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 721 RSSPNDKHLLVKGLIKQ-------GEVVAVTGDGTNDAPALKEADV--------------GLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred cCCCchHHHHHHHHHhc-------CcEEEEecCCCCCchhhhhccc--------------chhccccchhhhhhhCCeEE
Confidence 34566899888888643 2457788999999999999985 445553 467777776
Q ss_pred --CChhHHHHHHH
Q 045882 815 --DDEEDVLALLK 825 (832)
Q Consensus 815 --~~~~eV~~~L~ 825 (832)
|+...+++.+.
T Consensus 780 ~DDNFssIVk~v~ 792 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVK 792 (1034)
T ss_pred EcCchHHHHHHHH
Confidence 34455555443
No 383
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=27.39 E-value=36 Score=32.71 Aligned_cols=39 Identities=21% Similarity=0.182 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 599 KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 599 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+.+.+.++|++| +++|+.++++|+.+...+...+..++
T Consensus 77 ~~~~~~~~~L~~l-~~~~~~~~i~Sn~~~~~~~~~l~~~~ 115 (176)
T PF13419_consen 77 QPYPGVRELLERL-KAKGIPLVIVSNGSRERIERVLERLG 115 (176)
T ss_dssp EESTTHHHHHHHH-HHTTSEEEEEESSEHHHHHHHHHHTT
T ss_pred chhhhhhhhhhhc-ccccceeEEeecCCcccccccccccc
Confidence 3557899999999 67899999999999998888887654
No 384
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=26.88 E-value=1.3e+02 Score=29.35 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHhhhhCCCCcceEEEEeCChhhHHHHHHcccc
Q 045882 745 TKGLVAEKVLSTMISDGKLPDFVLCVGDDRSDEDMFESISQA 786 (832)
Q Consensus 745 nKG~al~~Ll~~l~~~gi~~d~vl~~GDd~ND~~Mf~~a~~~ 786 (832)
=|...++.|.+.+.. ....++++|||..+|..+.+.+|-.
T Consensus 102 ~K~~~l~~i~~~~~~--~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 102 FKIACLRDIKSLFPP--QGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcCC--CCCCEEEEeCCCchhHHHHHHcCCC
Confidence 478888888876521 2346788999999999999999864
No 385
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=26.53 E-value=4.1e+02 Score=33.13 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=83.6
Q ss_pred CCEEEEEeccccccCCHHH-HHHHHHHHH--HhCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISL-KLLAMEQLL--KVHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+-..++.+-|+..-|-..+ .|..+++++ .++|+.. ..+++|..|-.+-++.. -.++-+.|..+++.||..-...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhcCChhhCC
Confidence 3456788999999888777 666665554 3566633 34677767655533322 23556688888888886544445
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS 487 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~ 487 (832)
.-.|+|+. .....--..++.+|||-..+|+ .++|| |++++ |.-++ .|++-+|..-|.--+
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~------ag~EA--SGTsn--MK~am--------NGaLtlgtlDGanvE 666 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIST------AGKEA--SGTGN--MKLAL--------NGALTVGTLDGANVE 666 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCC------CCccc--cCcch--hHHHh--------cCceeeecccchHHH
Confidence 55688876 3455555678999999887774 55663 33322 22222 356666666665433
No 386
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi).
Probab=25.66 E-value=4.7e+02 Score=29.00 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=52.0
Q ss_pred HHHHHHHcCCCEEEEEeccccccC-CHHHHHHHHHHHHHhCCCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhc
Q 045882 324 VKEIREQFKGKKVIVGVDDMDIFK-GISLKLLAMEQLLKVHPELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINE 402 (832)
Q Consensus 324 ~~~l~~~~~~~~vil~VdRld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~ 402 (832)
.+.+.+.|++ ..++-+|-.|..+ |+...++.++.|.++... +.=|.+ +..|-.++-.++.+..++.
T Consensus 208 ~~~~~~~~p~-~~i~L~Dtyd~~~~~~~~~l~~~~~l~~~~~~----~~gvR~------DSGd~~~~~~~~r~~l~~~-- 274 (327)
T cd01570 208 FRAFAEAYPD-NFTLLVDTYDTLRSGLPNAIAVAKELGALGYR----LVGVRI------DSGDLAYLSKEARKMLDEA-- 274 (327)
T ss_pred HHHHHHHCCC-CcEEEEEcccchhhhHHHHHHHHHHHHhhCCC----ceEEEe------CCCCHHHHHHHHHHHHHHC--
Confidence 3445566776 4466679999885 999999999887553222 212322 1122223333333333332
Q ss_pred ccCCCCcccEE-EecCCCCHHHHHHHHHh
Q 045882 403 TYGVPGYEPVI-LIDRPVPLHEKTAYYAL 430 (832)
Q Consensus 403 ~~~~~~~~pv~-~~~~~v~~~el~aly~~ 430 (832)
|+.++. ++.+.++.+.+..++..
T Consensus 275 -----G~~~~~Iv~Sdgld~~~i~~l~~~ 298 (327)
T cd01570 275 -----GLTKVKIVASNDLDEYTIAALNAQ 298 (327)
T ss_pred -----CCCCcEEEEeCCCCHHHHHHHHHC
Confidence 344443 34678999999998874
No 387
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=25.41 E-value=60 Score=32.85 Aligned_cols=38 Identities=13% Similarity=-0.076 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+-+.+.++|+.| ++.|+.++|+|+.+...+..+++.++
T Consensus 86 ~~~g~~~~L~~l-~~~g~~~~i~S~~~~~~~~~~l~~~~ 123 (213)
T TIGR01449 86 VFPGVEATLGAL-RAKGLRLGLVTNKPTPLARPLLELLG 123 (213)
T ss_pred cCCCHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcC
Confidence 446788899999 67799999999999999988887653
No 388
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=24.99 E-value=76 Score=31.32 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=29.5
Q ss_pred HHHHHHHHHhhhhCC--CCcceEEEEeCCh--------hhHHHHHHccc
Q 045882 747 GLVAEKVLSTMISDG--KLPDFVLCVGDDR--------SDEDMFESISQ 785 (832)
Q Consensus 747 G~al~~Ll~~l~~~g--i~~d~vl~~GDd~--------ND~~Mf~~a~~ 785 (832)
...+..+++.+ | +.++++++|||+. +|+..=+.+|.
T Consensus 111 p~~~~~~~~~~---~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi 156 (166)
T TIGR01664 111 TGMWEYLQSQY---NSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGL 156 (166)
T ss_pred cHHHHHHHHHc---CCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCC
Confidence 45778888887 7 8999999999986 68888877764
No 389
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=24.90 E-value=1.3e+02 Score=31.75 Aligned_cols=29 Identities=10% Similarity=0.037 Sum_probs=23.2
Q ss_pred EEEEeCChhhHHHHHHcccccCCCCCCCCCcEEEEEeCCc
Q 045882 767 VLCVGDDRSDEDMFESISQATYGSSLPIAPEIFACTVGQK 806 (832)
Q Consensus 767 vl~~GDd~ND~~Mf~~a~~~~~~~~~~~~~~~f~v~vG~~ 806 (832)
++++||+.+|+..-+.+|.. ..+|..|.-
T Consensus 187 ~i~vGDs~~DI~aAk~AGi~-----------~I~V~~g~~ 215 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEAGAR-----------GIRILRASN 215 (237)
T ss_pred eEEEeCCHHHHHHHHHCCCC-----------EEEEEecCC
Confidence 79999999999988888753 367777753
No 390
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=24.71 E-value=6.8e+02 Score=28.57 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=61.4
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcccccc------
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPS------ 487 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~------ 487 (832)
+....+|+.+ ++..||++|-. -|+|.+ .|++..+.| +|+= ..+.++
T Consensus 287 ~v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gvP-------------------~vv~--P~~~DQ~~nA~r 338 (406)
T COG1819 287 IVADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGVP-------------------LVVI--PDGADQPLNAER 338 (406)
T ss_pred EEecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCCC-------------------EEEe--cCCcchhHHHHH
Confidence 3445677665 78899998864 577766 488887543 2321 111233
Q ss_pred ---CCCc--eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHH
Q 045882 488 ---LSGA--IRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSHDVAYWAHSFMQDL 544 (832)
Q Consensus 488 ---l~~a--~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (832)
+.-| +...+++.+.++++++++|+.+ .-+.+-+++++....++...=+...+.++
T Consensus 339 ve~~G~G~~l~~~~l~~~~l~~av~~vL~~~--~~~~~~~~~~~~~~~~~g~~~~a~~le~~ 398 (406)
T COG1819 339 VEELGAGIALPFEELTEERLRAAVNEVLADD--SYRRAAERLAEEFKEEDGPAKAADLLEEF 398 (406)
T ss_pred HHHcCCceecCcccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHhhhcccHHHHHHHHHHH
Confidence 1224 4445799999999999999853 33344455666666666544444444443
No 391
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=24.56 E-value=1.4e+03 Score=28.15 Aligned_cols=176 Identities=11% Similarity=0.091 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC---------C
Q 045882 419 VPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL---------S 489 (832)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l---------~ 489 (832)
.+.+....+++.-+++++|+-|+-.=+.++|+-.++ ++-+.+|++...-.++.+ .
T Consensus 234 m~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~----------------~~~a~lIlTgg~~~~~~v~~l~~~a~~~ 297 (684)
T PRK05632 234 RSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG----------------PPIAGLLLTGGYEPDPRIAKLCEGAFET 297 (684)
T ss_pred cchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC----------------CCceEEEEcCCCCCCHHHHHHHhhcccC
Confidence 345555666665555555555554444444441110 112336665443333322 1
Q ss_pred C-ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhcC-CHHHHHHHHHHHHHHHHHhhccccccccCcccCCCH
Q 045882 490 G-AIRVNPWDIDAVADALHDAITMSDVEKQLRHEKHYRYICSH-DVAYWAHSFMQDLERACRDHYSKRCWGIGFGLSLSV 567 (832)
Q Consensus 490 ~-a~~VnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~ 567 (832)
+ .++.-|+|.-++|..|.++..--..+-..+.+...+++.+| |..+|.+. +.... .. ..+ +. ...-.
T Consensus 298 ~ipVl~t~~dT~~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~~~~----~~-~~~---~~--p~~~~ 366 (684)
T PRK05632 298 GLPVLSVDTNTYQTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LTATS----ER-SRR---LS--PPAFR 366 (684)
T ss_pred CCCEEEecCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hccCC----CC-CCC---cC--HHHHH
Confidence 2 46777999999999999776422222234466777787887 87777774 22100 00 001 10 11234
Q ss_pred HHHHHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcC
Q 045882 568 DRIVDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAP 636 (832)
Q Consensus 568 ~~i~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 636 (832)
+.+.+.-+..++|++|-.= -.++++++...+ .+.|+.-.|.-|+.. .+++.+..
T Consensus 367 ~~l~~~a~~~~~~i~~~e~-------------~d~~~l~Aa~~~-~~~g~~~~iLvG~~~-~I~~~~~~ 420 (684)
T PRK05632 367 YQLTERARAAKKRIVLPEG-------------DEPRTLKAAAIC-LERGIADCVLLGNPE-EIRRVAAA 420 (684)
T ss_pred HHHHHHHhcCCCEEEEeCC-------------CCHHHHHHHHHH-HHcCCceEEEECCHH-HHHHHHHH
Confidence 4566665666667666431 147888888876 567877777778864 45555544
No 392
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=24.38 E-value=99 Score=38.03 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=51.5
Q ss_pred HHHhhccCcEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 571 VDAYKRTSRRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 571 ~~~y~~s~~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
...+....+-.+++-.||.+..--.....+-++..+++++| ++.|+.+++.||-.....+..-++++
T Consensus 509 ~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L-~~~Gi~~~mLTGDn~~~A~~iA~~lG 575 (713)
T COG2217 509 IEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAAL-KALGIKVVMLTGDNRRTAEAIAKELG 575 (713)
T ss_pred HHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 34445455558999999977642113456778899999999 78899999999999999999888764
No 393
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=23.57 E-value=5.4e+02 Score=32.12 Aligned_cols=105 Identities=11% Similarity=-0.016 Sum_probs=70.4
Q ss_pred CCEEEEEeccccccCCHHH-HHHHHHHHH--HhCCCcc-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCC
Q 045882 333 GKKVIVGVDDMDIFKGISL-KLLAMEQLL--KVHPELQ-GKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPG 408 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~-~l~A~~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~ 408 (832)
+...++.+-|+..-|-..+ .|..++++. ..+|+.. ..+++|..|-.+-++.. -.++-+.|..+++.||..-...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHM-AKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHH-HHHHHHHHHHHHHHhccChhhCC
Confidence 3456788999999998777 666666553 3456542 24667767655533322 23566788888888887644445
Q ss_pred cccEEEecCCCCHHHHHHHHHhcCcceeccc
Q 045882 409 YEPVILIDRPVPLHEKTAYYALAECCIVNAV 439 (832)
Q Consensus 409 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS~ 439 (832)
.-.|+|+.. ....--..++.+|||-..+|+
T Consensus 605 ~lkVVFlen-Y~VslAe~iipaaDvseqist 634 (794)
T TIGR02093 605 KLKVVFVPN-YNVSLAELIIPAADLSEQIST 634 (794)
T ss_pred ceeEEEeCC-CChHHHHHhhhhhhhhhhCCC
Confidence 556888863 445555578999999887774
No 394
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=23.32 E-value=3.7e+02 Score=31.76 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=66.7
Q ss_pred EEEeccccccCCHHHHHHHHHHHHH-hCCCccCc--EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 045882 337 IVGVDDMDIFKGISLKLLAMEQLLK-VHPELQGK--LVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVI 413 (832)
Q Consensus 337 il~VdRld~~KGi~~~l~A~~~ll~-~~P~~~~~--vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~ 413 (832)
++++.|--.-|.+..+|-|+..+.. ++..-+++ .+|| -.|+ .||..++++.+.++....+ ..-+.
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLV--L~PT-------RELA~QV~~~~~~~~~~~~---~~~~c 198 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLV--LAPT-------RELAVQVQAEAREFGKSLR---LRSTC 198 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEE--EcCc-------HHHHHHHHHHHHHHcCCCC---ccEEE
Confidence 7789999999999999999999987 34443443 4554 4465 3677777777777765543 22344
Q ss_pred EecCCCCHHHHHHHHHhcCcceecccc
Q 045882 414 LIDRPVPLHEKTAYYALAECCIVNAVR 440 (832)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~ 440 (832)
+.++.--..++..+-+.+||+|-|+-|
T Consensus 199 vyGG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 199 VYGGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred EeCCCCccHHHHHHhcCCcEEEeCChH
Confidence 556655677899999999999999853
No 395
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=23.25 E-value=53 Score=33.06 Aligned_cols=37 Identities=5% Similarity=-0.084 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+.|...+.++.. +++++.|+|+||-.-..+.++|..+
T Consensus 74 Idp~fKef~e~i-ke~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 74 IDPGFKEFVEWI-KEHDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred cCccHHHHHHHH-HHcCCCEEEEeCCCchHHHHHHHhh
Confidence 445555555555 5667777777777777776666653
No 396
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=23.11 E-value=8.7e+02 Score=28.66 Aligned_cols=103 Identities=11% Similarity=0.114 Sum_probs=56.8
Q ss_pred EEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCcc----ccccC
Q 045882 413 ILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIG----CSPSL 488 (832)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~s~~l 488 (832)
+++.+.+|+.++.+- ..+++||- +-|+ .+..||+.++.| +|+--+.+ .+.-+
T Consensus 348 v~i~~w~Pq~~lL~h-p~v~~fIt---HGG~-~s~~Eal~~GvP-------------------~v~iP~~~DQ~~Na~rv 403 (507)
T PHA03392 348 VLTQKWFPQRAVLKH-KNVKAFVT---QGGV-QSTDEAIDALVP-------------------MVGLPMMGDQFYNTNKY 403 (507)
T ss_pred eEEecCCCHHHHhcC-CCCCEEEe---cCCc-ccHHHHHHcCCC-------------------EEECCCCccHHHHHHHH
Confidence 345667888765432 44666652 3554 456799999664 33322222 11111
Q ss_pred --CC-ceEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhc------CCHHHHHHHHH
Q 045882 489 --SG-AIRVNP--WDIDAVADALHDAITMSDVEKQLRHEKHYRYICS------HDVAYWAHSFM 541 (832)
Q Consensus 489 --~~-a~~VnP--~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~------~~~~~W~~~~l 541 (832)
.| |+.+++ .+.+++.+||.++|+.+. -+++.++..+.+.. ..+.+|++..+
T Consensus 404 ~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~--y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 404 VELGIGRALDTVTVSAAQLVLAIVDVIENPK--YRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred HHcCcEEEeccCCcCHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 13 566654 467899999999997533 23333333333332 34566776543
No 397
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=22.31 E-value=80 Score=32.13 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+-+.+.++|+.| +++|+.++|+||.....+...++.++
T Consensus 83 ~~~g~~~~l~~L-~~~g~~~~i~S~~~~~~~~~~l~~~g 120 (214)
T PRK13288 83 EYETVYETLKTL-KKQGYKLGIVTTKMRDTVEMGLKLTG 120 (214)
T ss_pred cCcCHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcC
Confidence 456888999999 57799999999999998888877653
No 398
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=22.09 E-value=6.8e+02 Score=31.03 Aligned_cols=130 Identities=11% Similarity=0.107 Sum_probs=83.9
Q ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHHhCC-CccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCccc
Q 045882 333 GKKVIVGVDDMDIFKGISLKLLAMEQLLKVHP-ELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEP 411 (832)
Q Consensus 333 ~~~vil~VdRld~~KGi~~~l~A~~~ll~~~P-~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~p 411 (832)
+...++.+-|+..-|=..+.++=..++...-- ++..++.++..|-..-++.. -.++-+.+...++.||.+ ..
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~-aK~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYA-AKEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchH-HHHHHHHHHHHHHhhccc------ce
Confidence 35789999999999987777666666655433 56667776766654433322 235667788888888873 24
Q ss_pred EEEecCCCCHHHHHHHHHhcCcceecccccCCCCcceeeeeeecCCCCchhhhhhhcCCCCCceEEeccCccccccC
Q 045882 412 VILIDRPVPLHEKTAYYALAECCIVNAVRDGMNLMPYKYTICRQGTPKMDEAMELASVCPRTSMLVISEFIGCSPSL 488 (832)
Q Consensus 412 v~~~~~~v~~~el~aly~~ADv~vvtS~~EGmnLv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~s~~l 488 (832)
|+|+.. .+-.--..++.+|||-..+|+ .++|| |++++ |.-++ .|.+-+|..=|+--++
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~------a~~EA--SGTsn--MK~al--------NGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPT------AGKEA--SGTSN--MKAAL--------NGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCC------CCccc--cCcCc--chHHh--------cCCceeeccccHHHHH
Confidence 788763 444444467899999888874 56664 44432 22222 3667777777766555
No 399
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=21.50 E-value=54 Score=38.55 Aligned_cols=29 Identities=3% Similarity=0.178 Sum_probs=20.7
Q ss_pred cCCCeEEEEcCCChhhHHHHhcC-CCCceEE
Q 045882 614 DSNNTTFIVSGRGKVSLGEWLAP-CENLGIA 643 (832)
Q Consensus 614 d~g~~V~I~SGR~~~~l~~~~~~-l~~l~li 643 (832)
..|. ++|+|+-....++.|..+ ++-..++
T Consensus 121 ~~g~-~vvVSASp~~~Vepfa~~~LGid~VI 150 (497)
T PLN02177 121 SFGK-RYIITASPRIMVEPFVKTFLGADKVL 150 (497)
T ss_pred hCCC-EEEEECCcHHHHHHHHHHcCCCCEEE
Confidence 4454 499999999999999865 4434343
No 400
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. Examples of this enzyme in Actinobacteria have been found to be bifunctional, also possessing phosphoribosylanthranilate isomerase activity ; the trusted cutoff here has now been raised to 275.0 to exclude the bifunctional group, now represented by model TIGR01919. HisA from Lactococcus lactis was reported to be inactive (MEDLINE:93322317).
Probab=21.42 E-value=2.2e+02 Score=29.49 Aligned_cols=63 Identities=14% Similarity=0.108 Sum_probs=43.3
Q ss_pred CCHHHHHHHhhccC-cEEEEEecCCCcCCCCCCCCCCCHHHHHHHHHhhccCCCeEEEEcC-CChhhHHHHhc
Q 045882 565 LSVDRIVDAYKRTS-RRAIFLDYDGTVVPHHALIKKPSRDVIYVLRELCGDSNNTTFIVSG-RGKVSLGEWLA 635 (832)
Q Consensus 565 l~~~~i~~~y~~s~-~rlI~lD~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~~~~~ 635 (832)
.+...+++.|.... ..+.++|+||++... ....++++.+.+. -+.++.+-=| |+.+.++.++.
T Consensus 28 ~dp~~~a~~~~~~g~~~l~v~dl~~~~~g~-----~~~~~~i~~i~~~---~~~pi~~ggGI~~~ed~~~~~~ 92 (230)
T TIGR00007 28 DDPVEAAKKWEEEGAERIHVVDLDGAKEGG-----PVNLPVIKKIVRE---TGVPVQVGGGIRSLEDVEKLLD 92 (230)
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccCC-----CCcHHHHHHHHHh---cCCCEEEeCCcCCHHHHHHHHH
Confidence 47778889997664 689999999998652 2234455555444 3566777555 77888888875
No 401
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=21.01 E-value=71 Score=32.60 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCC
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPC 637 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 637 (832)
+-+.+.++|+.| +++|+.++|+||.....+...+..+
T Consensus 88 l~~G~~~~L~~L-~~~g~~~~ivT~~~~~~~~~~l~~~ 124 (220)
T TIGR03351 88 ALPGAEEAFRSL-RSSGIKVALTTGFDRDTAERLLEKL 124 (220)
T ss_pred cCCCHHHHHHHH-HHCCCEEEEEeCCchHHHHHHHHHh
Confidence 456889999999 5779999999999999888887754
No 402
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=20.54 E-value=2.5e+02 Score=27.33 Aligned_cols=67 Identities=10% Similarity=0.263 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhC-CCccCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 045882 351 LKLLAMEQLLKVH-PELQGKLVLVQIVNPARSTGKDVQDAKLETYTITKRINETYGVPGYEPVILIDRPVPLHEKTAYYA 429 (832)
Q Consensus 351 ~~l~A~~~ll~~~-P~~~~~vvLvqi~~p~r~~~~~~~~l~~ev~~lv~~iN~~~~~~~~~pv~~~~~~v~~~el~aly~ 429 (832)
.-...+.+|+++| |+ +|.|+. ...+..++.+.+.+++.+.... ....+|-++.- .++.+.+|+
T Consensus 50 ~~~~~l~~~i~~~kP~------vI~v~g----~~~~s~~l~~~v~~~v~~~~~~---~~~~~i~V~~v---~~~~A~lY~ 113 (150)
T PF14639_consen 50 EDMERLKKFIEKHKPD------VIAVGG----NSRESRKLYDDVRDIVEELDED---EQMPPIPVVIV---DDEVARLYS 113 (150)
T ss_dssp HHHHHHHHHHHHH--S------EEEE------SSTHHHHHHHHHHHHHHHTTB----TTS-B--EEE------TTHHHHH
T ss_pred HHHHHHHHHHHHcCCe------EEEEcC----CChhHHHHHHHHHHHHHHhhhc---ccCCCceEEEE---CcHHHHHHh
Confidence 3445556666654 55 555543 3356667888888888776522 12223333222 558899999
Q ss_pred hcCc
Q 045882 430 LAEC 433 (832)
Q Consensus 430 ~ADv 433 (832)
.++.
T Consensus 114 ~S~r 117 (150)
T PF14639_consen 114 NSKR 117 (150)
T ss_dssp TSHH
T ss_pred cCHH
Confidence 8865
No 403
>cd03309 CmuC_like CmuC_like. Proteins similar to the putative corrinoid methyltransferase CmuC. Its function has been inferred from sequence similarity to the methyltransferases CmuA and MtaA. Mutants of Methylobacterium sp. disrupted in cmuC and purU appear deficient in some step of chloromethane metabolism.
Probab=20.53 E-value=7.3e+02 Score=27.36 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCc
Q 045882 179 AYVSANKVFADKIMEVINPEEDYVWIHDY 207 (832)
Q Consensus 179 ~Y~~vN~~fa~~v~~~~~~~~d~vwvhDy 207 (832)
.-.+++..|+++.++.+. -|+|++||=
T Consensus 152 ~ltd~~i~y~~~qiea~G--ad~I~i~Dd 178 (321)
T cd03309 152 YLTDAKLKLYERRIKHLE--PDLLVYHDD 178 (321)
T ss_pred HHHHHHHHHHHHHHHHhC--CCEEEEeCC
Confidence 344456677776666553 489999883
No 404
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=20.25 E-value=97 Score=31.56 Aligned_cols=38 Identities=24% Similarity=0.014 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 600 PSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 600 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
+-+.+.++|+.| ++.|..++|+|+.+...+...+..++
T Consensus 95 ~~~g~~~~L~~L-~~~g~~~~i~Tn~~~~~~~~~l~~~~ 132 (221)
T TIGR02253 95 VYPGVRDTLMEL-RESGYRLGIITDGLPVKQWEKLERLG 132 (221)
T ss_pred CCCCHHHHHHHH-HHCCCEEEEEeCCchHHHHHHHHhCC
Confidence 446889999999 67799999999999887777776543
No 405
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=20.06 E-value=95 Score=31.66 Aligned_cols=39 Identities=13% Similarity=0.062 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHhhccCCCeEEEEcCCChhhHHHHhcCCC
Q 045882 599 KPSRDVIYVLRELCGDSNNTTFIVSGRGKVSLGEWLAPCE 638 (832)
Q Consensus 599 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 638 (832)
.+-+.+.++|+.| ++.|+.++|+||.....+..++..++
T Consensus 93 ~~~~g~~~~l~~l-~~~g~~~~i~S~~~~~~~~~~l~~~~ 131 (226)
T PRK13222 93 RLYPGVKETLAAL-KAAGYPLAVVTNKPTPFVAPLLEALG 131 (226)
T ss_pred ccCCCHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcC
Confidence 3557889999999 67799999999999998888887653
Done!