Query 045892
Match_columns 130
No_of_seqs 100 out of 1034
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:12:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f7s_A Actin depolymerizing fa 100.0 1.1E-41 3.8E-46 234.2 14.7 130 1-130 8-139 (139)
2 1cnu_A Actophorin, ADF, cofili 100.0 2.5E-41 8.6E-46 231.7 15.8 129 1-130 3-133 (137)
3 2i2q_A Cofilin; N-terminal ser 100.0 2.9E-41 1E-45 231.5 13.9 128 1-130 6-135 (137)
4 2xfa_A Actin depolymerization 100.0 1.9E-41 6.5E-46 235.2 12.3 128 1-129 10-144 (148)
5 1cfy_A Cofilin; actin-binding, 100.0 6.7E-41 2.3E-45 231.2 14.7 128 1-129 6-136 (143)
6 1vkk_A GMF-gamma, GLIA maturat 100.0 3E-40 1E-44 230.7 14.6 127 1-129 20-150 (154)
7 2w0i_A Twinfilin-2; cytoskelet 100.0 5.9E-40 2E-44 224.7 15.0 126 1-130 2-135 (135)
8 1v6f_A MGMF-beta, GLIA maturat 100.0 9.4E-40 3.2E-44 227.5 15.2 127 1-129 14-144 (151)
9 2kd5_A ADF H, actin severing a 100.0 7E-40 2.4E-44 226.5 14.3 126 1-129 6-133 (144)
10 2kvk_A Actin severing and dyna 100.0 1.4E-39 4.8E-44 225.1 15.0 126 1-129 6-133 (144)
11 1tvj_A Cofilin; ADF, actin bin 100.0 1.6E-39 5.6E-44 229.5 15.3 129 1-130 5-154 (166)
12 2lj8_A Cofilin/actin depolymer 100.0 2E-39 6.9E-44 224.3 15.3 126 1-129 14-140 (144)
13 1m4j_A A6 gene product, twinfi 100.0 5.9E-40 2E-44 226.4 10.9 125 1-129 7-138 (142)
14 2vac_A Twinfilin-2; transferas 100.0 1E-39 3.5E-44 223.2 10.6 123 1-127 4-133 (134)
15 2d8b_A Twinfilin-1; cell-free 100.0 7.4E-38 2.5E-42 221.0 13.8 125 2-130 28-160 (166)
16 1ak6_A Destrin; actin depolyme 100.0 6.3E-39 2.2E-43 228.0 7.2 129 1-130 14-162 (174)
17 1hqz_1 ABP1P, actin-binding pr 100.0 2.9E-37 1E-41 212.5 13.4 120 4-129 12-135 (141)
18 3daw_B Twinfilin-1, protein A6 100.0 1.1E-36 3.9E-41 214.5 16.3 126 1-130 22-155 (164)
19 2l72_A Tgadf, actin depolymeri 100.0 7.7E-37 2.6E-41 210.2 11.1 112 1-123 26-138 (139)
20 1x67_A Drebrin-like protein; c 100.0 3.4E-36 1.2E-40 208.5 14.0 120 5-129 17-139 (146)
21 3q2b_A Pfadf1, cofilin/actin-d 100.0 1.6E-37 5.5E-42 209.9 5.7 112 1-122 7-122 (124)
22 1t3y_A Coactosin-like protein; 100.0 9E-35 3.1E-39 200.3 12.9 122 4-129 6-128 (141)
23 2vik_A Villin 14T; actin-bindi 75.2 11 0.00039 24.4 6.3 82 13-108 9-91 (126)
24 1t44_G Chimera of gelsolin dom 66.4 26 0.00088 23.3 7.8 86 9-108 6-91 (147)
25 3tu5_B Gelsolin, protein cordo 57.8 40 0.0014 25.1 7.0 86 9-108 24-109 (297)
26 2ygw_A Malonyl-COA decarboxyla 39.8 15 0.00053 29.1 2.3 35 41-81 191-225 (460)
27 1fmd_1 Foot-and-mouth disease 39.6 39 0.0013 23.9 4.2 30 55-90 68-97 (208)
28 1ncq_A Coat protein VP1; HRV, 38.9 44 0.0015 24.8 4.6 15 76-90 147-161 (289)
29 2fh1_A Gelsolin; calcium, cont 36.9 1.3E+02 0.0044 22.4 7.7 74 21-108 8-82 (344)
30 2ff3_A Gelsolin; protein-prote 36.7 92 0.0031 20.7 11.2 85 9-108 28-113 (150)
31 3fg6_A Adseverin, scinderin; C 36.1 1.3E+02 0.0046 22.7 7.1 34 75-108 90-123 (371)
32 3vbh_A EV71, genome polyprotei 35.9 52 0.0018 24.6 4.6 35 56-90 126-164 (297)
33 3cip_G Gelsolin; actin, dictyo 31.1 1.1E+02 0.0036 19.7 11.4 87 9-109 9-95 (128)
34 1tme_1 Theiler'S murine enceph 30.8 55 0.0019 24.1 3.9 33 57-89 121-153 (274)
35 1z7s_1 Human coxsackievirus A2 30.3 72 0.0025 23.7 4.5 15 76-90 149-163 (298)
36 1qqp_1 FMDV, protein (genome p 29.5 22 0.00075 25.3 1.5 29 56-90 69-97 (213)
37 2mev_1 Mengo virus coat protei 28.5 54 0.0018 24.2 3.5 33 57-89 121-153 (277)
38 1vs0_A Putative DNA ligase-lik 28.4 71 0.0024 23.5 4.3 38 27-66 78-115 (310)
39 1aym_1 HRV16, human rhinovirus 27.4 90 0.0031 23.1 4.6 16 76-91 139-154 (285)
40 1zba_1 Coat protein VP1; oligo 23.5 33 0.0011 24.4 1.5 29 56-90 69-97 (212)
41 1ev1_1 Echovirus 1; viral coat 22.6 33 0.0011 25.4 1.4 16 76-91 141-156 (281)
42 1d4m_1 Protein (coxsackievirus 22.1 34 0.0012 25.5 1.4 15 76-90 141-155 (299)
43 1bev_1 Bovine enterovirus coat 21.6 36 0.0012 25.2 1.4 15 76-90 140-154 (281)
44 2wzr_1 Polyprotein; capsid, RN 21.5 28 0.00097 24.8 0.8 31 55-90 69-99 (219)
45 3cji_A Polyprotein; virus caps 20.8 72 0.0025 23.3 2.9 14 77-90 136-149 (263)
46 1d0n_A Horse plasma gelsolin; 20.6 3.7E+02 0.012 22.3 7.5 77 19-108 391-467 (729)
47 1pfj_A TFIIH basal transcripti 20.3 80 0.0027 19.9 2.7 32 53-86 5-38 (108)
No 1
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=100.00 E-value=1.1e-41 Score=234.20 Aligned_cols=130 Identities=74% Similarity=1.240 Sum_probs=112.9
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFF 78 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vf 78 (130)
|.++++|+++|++|+.++++|||+|+|++ ++|+++++|++..+|++|.+.||+++|||++||+++.+.+|+.++||+|
T Consensus 8 i~v~~e~~~af~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~k~vf 87 (139)
T 1f7s_A 8 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFF 87 (139)
T ss_dssp CEECHHHHHHHHHHHHHCCCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cEeCHHHHHHHHHHHcCCCcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccCcccCEEE
Confidence 57899999999999987789999999988 4999998887667899999999999999999999999888999999999
Q ss_pred EEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhhC
Q 045892 79 IAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERAF 130 (130)
Q Consensus 79 I~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~~ 130 (130)
|+|||++||+|+||+|||+|.+|++.|+|++++|+|++++||+++.+.+|+.
T Consensus 88 I~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v~i~a~d~~el~~~~i~~~~~ 139 (139)
T 1f7s_A 88 IAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139 (139)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHTTCTTCCEEEEECCTTC-----------
T ss_pred EEECCCCCChhHheehHHhHHHHHHhcCCeEEEEEECChHHCCHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999873
No 2
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=100.00 E-value=2.5e-41 Score=231.71 Aligned_cols=129 Identities=47% Similarity=0.880 Sum_probs=121.7
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFF 78 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vf 78 (130)
|+++++|.++|++|+.+++++||+|+|++ ++|+++++|+++.+|++|++.||+++|||++||+++.+.+| .+++++|
T Consensus 3 i~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~~k~vf 81 (137)
T 1cnu_A 3 IAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGG-QRNKITF 81 (137)
T ss_dssp CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTE-EEEEEEE
T ss_pred CccCHHHHHHHHHHHcCCCccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCC-CccCEEE
Confidence 67999999999999988779999999987 89999988876789999999999999999999999988777 7899999
Q ss_pred EEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhhC
Q 045892 79 IAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERAF 130 (130)
Q Consensus 79 I~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~~ 130 (130)
|+|||++||+|+||+|||++.+|++.|+|++++|+|++++||+++.+.++++
T Consensus 82 I~w~Pd~a~v~~Kmlyassk~~l~~~l~g~~~~i~a~~~~el~~~~i~~kl~ 133 (137)
T 1cnu_A 82 ILWAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAK 133 (137)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSTTTTSHHHHHHHHT
T ss_pred EEECCCCCChHHheehHHhHHHHHHHhcCceEEEEECChHHCCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999874
No 3
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-41 Score=231.47 Aligned_cols=128 Identities=42% Similarity=0.806 Sum_probs=108.8
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFF 78 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vf 78 (130)
|+++++|.++|++|+.+++++||+|+|++ ++|++++ +.++.+|++|++.||+++|||++||+++.+.+| .+++++|
T Consensus 6 i~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~-~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~-~~~k~vf 83 (137)
T 2i2q_A 6 VKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEG-VRNKIIF 83 (137)
T ss_dssp CEECHHHHHHHHHHHHTCCCSEEEEEECTTSSEEEEEE-EECCCCHHHHHHTSCSSSCEEEEEEEEECSSSS-CEEEEEE
T ss_pred cccCHHHHHHHHHHHCCCCceEEEEEECCCCcEEEEec-CCCCCCHHHHHHhCCCcCceEEEEEeeeecCCC-CccCEEE
Confidence 57999999999999998779999999987 7899987 555688999999999999999999999988777 7899999
Q ss_pred EEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhhC
Q 045892 79 IAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERAF 130 (130)
Q Consensus 79 I~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~~ 130 (130)
|+|||++|++|+||+|||++.+|++.|+|++++|+|++++||+++.+.++++
T Consensus 84 I~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl~ 135 (137)
T 2i2q_A 84 ISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYETVLEKVT 135 (137)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHTTCCCCCEEEEECCCC------------
T ss_pred EEECCCCCChhHhhhhHHHHHHHHHHhcCceEEEEECChHHcCHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999874
No 4
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-41 Score=235.22 Aligned_cols=128 Identities=34% Similarity=0.573 Sum_probs=119.0
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC-cEEEEe------ecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCccc
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN-QQVVVE------KLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQK 73 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~-~~i~v~------~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~ 73 (130)
|.+++||+++|++|+.++++|||+|+|++ ++|+++ ++|++..+|++|++.||+++|||++||+++.+.+|+.+
T Consensus 10 i~v~~e~~~af~~~k~~k~~~~ii~~i~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~~~~g~~~ 89 (148)
T 2xfa_A 10 VNVSDECIYEFNRLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIPTPEGVLR 89 (148)
T ss_dssp CEECHHHHHHHHHHHTSCCCSEEEEEEETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEECCSSCCCE
T ss_pred CeeCHHHHHHHHHHHCCCceEEEEEEECCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEecccccCCCCcc
Confidence 46899999999999998779999999964 889998 55544468999999999999999999999998889899
Q ss_pred ceEEEEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 74 SKIFFIAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 74 ~k~vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
++|+||+|||++|++|+||+|||||.+|++.|+|++++|+|++ +||+++.+.+++
T Consensus 90 ~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~i~atd-~el~~~~i~~k~ 144 (148)
T 2xfa_A 90 DRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFKSLEITC-DINEFEEELKAI 144 (148)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSEEEEECS-CGGGHHHHHHHH
T ss_pred cCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeEEEEEEc-ccCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 999999999987
No 5
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=100.00 E-value=6.7e-41 Score=231.15 Aligned_cols=128 Identities=45% Similarity=0.817 Sum_probs=121.1
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCC-cccceEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHEN-CQKSKIF 77 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~-~~~~k~v 77 (130)
|.++++|.++|++|+.+++++||+|+|++ ++|+++++|+ .++|++|++.||+++|||++||+++.+.+| +.++||+
T Consensus 6 i~v~~e~~~a~~~~~~~~~~~~ii~~i~~~~~~i~v~~~g~-~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~~k~v 84 (143)
T 1cfy_A 6 VAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETST-DPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIV 84 (143)
T ss_dssp CEECHHHHHHHHHHHHHCCCSEEEEEECTTSSEEEEEEEEC-CCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCEEEEEE
T ss_pred cEeCHHHHHHHHHHHCCCCeeEEEEEEcCCCCEEEEEecCC-CCCHHHHHHhCCCCCcEEEEEEeeeecCCCcccccCEE
Confidence 57899999999999988779999999987 8999988775 678999999999999999999999988888 8899999
Q ss_pred EEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 78 FIAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 78 fI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
||+|||++||+|+||+|||++.+|++.|+|++++|++++++||+++.+.+++
T Consensus 85 fI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~~i~a~d~~el~~~~i~~kl 136 (143)
T 1cfy_A 85 FFTWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTDFSEVSYDSVLERV 136 (143)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESSGGGGSHHHHHHHH
T ss_pred EEEECCCCCChhheeehHhhHHHHHHhcCCceEEEEeCChHHCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986
No 6
>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A
Probab=100.00 E-value=3e-40 Score=230.74 Aligned_cols=127 Identities=24% Similarity=0.382 Sum_probs=118.7
Q ss_pred CccCHHHHHHHHHhhcCC--CceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceE
Q 045892 1 MAVHDDCKLKFMELKAKR--NYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKI 76 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~--~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~ 76 (130)
++|+++|+++|++|+.++ +.+||+|+|++ ++|+|++.++ +.+|++|++.||+++|||++|++++.+.+|+.++|+
T Consensus 20 ~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~-~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~g~~~~kl 98 (154)
T 1vkk_A 20 CEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQ-NISPEELKLELPERQPRFVVYSYKYVHDDGRVSYPL 98 (154)
T ss_dssp CEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEE-SCCHHHHHHHSCSSSCEEEEEECCEECTTSCEECCE
T ss_pred eeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCC-CCCHHHHHHhCCCCCcEEEEEEeeeccCCCcccccE
Confidence 578999999999999865 69999999987 7899987554 568999999999999999999999998888889999
Q ss_pred EEEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 77 FFIAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 77 vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
+||+|||++|++|+||+|||+|.+|++.| |++++|||+|++||+++.|.++|
T Consensus 99 vFI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~e~i~~kl 150 (154)
T 1vkk_A 99 CFIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELTKVFEIRTTDDLTETWLKEKL 150 (154)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCCCEEEESSGGGCCHHHHHHHH
T ss_pred EEEEECCCCCChhhhhhhHhhHHHHHHhh-CceEEEEECChHhCCHHHHHHHH
Confidence 99999999999999999999999999999 89999999999999999999987
No 7
>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=224.69 Aligned_cols=126 Identities=17% Similarity=0.393 Sum_probs=117.6
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFF 78 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vf 78 (130)
++|+++|+++|++|+.++ ++||+|+|++ ++|++++++ +.+|++|.+.||+++|||++|++++.+.++ .++|++|
T Consensus 2 ~~v~~e~~~a~~~lk~~~-~~~ii~~id~~~~~I~v~~~~--~~~~~el~~~Lp~~~~rY~~y~~~~~~~~~-~~~k~vf 77 (135)
T 2w0i_A 2 MPLQPEAQRALQQLKQKM-VNYIQMKLDLERETIELVHTE--PTDVAQLPSRVPRDAARYHFFLYKHTHEGD-PLESVVF 77 (135)
T ss_dssp CCBCHHHHHHHHHHHTTS-CSEEEEEEETTTTEEEEEECC--CCCGGGGGGGSCSSSCEEEEEEEEEEETTE-EEEEEEE
T ss_pred cccCHHHHHHHHHHHcCC-CcEEEEEEeCCCCEEEEEecC--CCCHHHHHhhCCCCCcEEEEEecccccCCC-CCccEEE
Confidence 589999999999999986 9999999987 789998875 678999999999999999999999987655 8999999
Q ss_pred EEEcCC-CCCchhhhhhhhhHHHHHhHcC---Cee--EEEEECCCCCCCHHHHHhhhC
Q 045892 79 IAWSPD-PSKVRSKMVYASSKDRFKRELD---GIQ--FELQATDPSEMSLDIIKERAF 130 (130)
Q Consensus 79 I~w~P~-~a~v~~KMlyas~k~~l~~~l~---g~~--~~i~~~~~~dl~~~~~~~~~~ 130 (130)
|+|||+ +|++|+||+|||+|.+|++.+. |++ ++|+|+|++||+++.|.+++|
T Consensus 78 I~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v~~~iea~d~~el~~~~i~~kl~ 135 (135)
T 2w0i_A 78 IYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIEIGDGAELTAEFLDDEVH 135 (135)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCGGGCCHHHHHHHHC
T ss_pred EEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCceeEEEEcCChhhcCHHHHHHhhC
Confidence 999999 9999999999999999999998 876 899999999999999999986
No 8
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=9.4e-40 Score=227.54 Aligned_cols=127 Identities=23% Similarity=0.395 Sum_probs=118.4
Q ss_pred CccCHHHHHHHHHhhcCC--CceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceE
Q 045892 1 MAVHDDCKLKFMELKAKR--NYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKI 76 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~--~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~ 76 (130)
++|+++|+++|++|+.++ +++||+|+|++ ++|++++.++ +.+|++|.+.||+++|||++|++++.+.+|+.++|+
T Consensus 14 ~~v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~-~~~~~el~~~Lp~~~prY~~~~~~~~~~~~~~~~k~ 92 (151)
T 1v6f_A 14 CDVAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELE-GVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPL 92 (151)
T ss_dssp CEECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEE-SCCHHHHGGGSCSSSCEEEEEECCEECTTSCEECCE
T ss_pred EEECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCC-CCCHHHHHhhCCCCCceEEEEecccccCCCcccccE
Confidence 578999999999999875 58999999987 6899987654 568999999999999999999999998888889999
Q ss_pred EEEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 77 FFIAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 77 vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
+||+|||++|++|+||+|||+|.+|++.+ |++++|+|+|++||+++.|.+++
T Consensus 93 vfI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~~iea~d~~El~~~~i~~kl 144 (151)
T 1v6f_A 93 CFIFSSPVGCKPEQQMMYAGSKNKLVQTA-ELTKVFEIRNTEDLTEEWLREKL 144 (151)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHT-TCSEEEEESSGGGCCHHHHHHHH
T ss_pred EEEEECCCCCChHHheehHHHHHHHHHHh-CCeEEEEECChHHCCHHHHHHHH
Confidence 99999999999999999999999999999 89999999999999999999987
No 9
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=100.00 E-value=7e-40 Score=226.52 Aligned_cols=126 Identities=22% Similarity=0.529 Sum_probs=118.6
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFF 78 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vf 78 (130)
|+++++|+++|++++.++ +||++|+|++ ++|+++++|..+++|++|++.||+++|||++||+.+.+++ ++++|++|
T Consensus 6 i~vs~e~~~a~~~~~~~~-~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~-~~~~k~vf 83 (144)
T 2kd5_A 6 VTLEESVRGAIDDLRMKK-SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAG-SKREKLIL 83 (144)
T ss_dssp CBCCHHHHHHHHHHTTTS-SSEEEEEECSSSCBEEEEEECCSCCCHHHHTTTTSCSSCEEEEEEEEEESSS-CEEEEEEE
T ss_pred CCcCHHHHHHHHHHHcCC-eeEEEEEECCCCCEEEEEeccCCCCCHHHHHHhCCccCcEEEEEEEEecCCC-CCccCEEE
Confidence 579999999999999886 9999999986 7899998887778999999999999999999999998776 56899999
Q ss_pred EEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 79 IAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 79 I~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
|+|||++||+|+||+|||++.+|++.|+|+ ++|++++++||+++.+.+++
T Consensus 84 I~w~Pd~a~vk~KMlyAssk~~l~~~l~g~-~~i~a~d~~el~~~~i~~kl 133 (144)
T 2kd5_A 84 IQWIPDTARPREKMMYSASRDALSSVSEGY-LPIQANDESGLDAEEIIRKV 133 (144)
T ss_dssp EEECCCCSCSHHHHHHHHHGGGGTTTTCCS-EEEEESSSSSSSHHHHHHHH
T ss_pred EEECCCCCCHHHHhhhHHHHHHHHHHhCCe-EEEEECChHHCCHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999999987
No 10
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=100.00 E-value=1.4e-39 Score=225.08 Aligned_cols=126 Identities=22% Similarity=0.525 Sum_probs=116.0
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFF 78 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vf 78 (130)
|.|+++|+++|++|+.+ +.||++|+|++ ++|+++..|+.+.+|++|++.||+++|||++|++.+.+. ++.++|++|
T Consensus 6 v~v~de~~~af~~lk~~-k~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~-~~~~~k~vf 83 (144)
T 2kvk_A 6 VTLEESVRGAIDDLRMK-KSRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDA-GSKREKLIL 83 (144)
T ss_dssp CEECHHHHHHHHHHHTT-SSSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEET-TEEEEEEEE
T ss_pred cccCHHHHHHHHHHhcC-CceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccC-CCCcccEEE
Confidence 57899999999999986 47999999976 789998888778899999999999999999999999755 557889999
Q ss_pred EEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 79 IAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 79 I~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
|+|||++||+|+||+|||+|.+|++.|+| +++|+|+|++||+++.+.+|+
T Consensus 84 I~w~Pd~a~vk~KMlyassk~~lk~~l~~-~~~i~a~d~~el~~e~i~~kl 133 (144)
T 2kvk_A 84 IQWIPDTARPREKMMYSASRDALSSVSEG-YLPIQANDESGLDAEEIIRKV 133 (144)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHHCTT-EEEEEESSGGGGCHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhcCC-EEEEEECChHHCCHHHHHHHH
Confidence 99999999999999999999999999987 579999999999999999886
No 11
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=100.00 E-value=1.6e-39 Score=229.48 Aligned_cols=129 Identities=33% Similarity=0.685 Sum_probs=117.7
Q ss_pred CccCHHHHHHHHHhhcCC---------CceEEEEEEeC--cEEEEee--------cCCC-CCChHHHhhcCCCCCceEEE
Q 045892 1 MAVHDDCKLKFMELKAKR---------NYRFIIFKIDN--QQVVVEK--------LGSP-GDSYDDFTTSLPADECRYAV 60 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~---------~~~~vi~~i~~--~~i~v~~--------~~~~-~~~~~el~~~L~~~~p~y~l 60 (130)
|.|+++|+++|++|+.++ .+||++|+|++ ..|++++ .++. .++|++|++.||+++|||++
T Consensus 5 i~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~prY~v 84 (166)
T 1tvj_A 5 VTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDCRYAL 84 (166)
T ss_dssp CEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSCEEEE
T ss_pred CeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCcEEEE
Confidence 579999999999999875 48999999987 6788876 3432 57899999999999999999
Q ss_pred EeeeeecCCCcccceEEEEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCC-CHHHHHhhhC
Q 045892 61 YDFDFITHENCQKSKIFFIAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM-SLDIIKERAF 130 (130)
Q Consensus 61 y~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl-~~~~~~~~~~ 130 (130)
||++|.+.++ .+++|+||+|||++|++|+||+|||||.+|++.|+|++++|+|++++|| +++++.+||.
T Consensus 85 y~~~~~~~~~-~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~~i~atd~~el~~~~~i~ekl~ 154 (166)
T 1tvj_A 85 YDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLG 154 (166)
T ss_dssp EEEEEEESSC-EEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCCEEEESSGGGTCCHHHHHHHHT
T ss_pred EeccccCCCC-CccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeEEEEECChHHcCCHHHHHHHhC
Confidence 9999987775 7999999999999999999999999999999999999999999999999 9999999873
No 12
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=100.00 E-value=2e-39 Score=224.31 Aligned_cols=126 Identities=29% Similarity=0.653 Sum_probs=115.7
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC-cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN-QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFI 79 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~-~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI 79 (130)
|.|++||+++|++|+.+ ..||++|+|++ +++++...+..+.+|++|++.||+++|||++|++.+.+.++ .+++|+||
T Consensus 14 i~vsde~~~af~~lk~~-k~~~ii~~i~d~~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~~-~~~k~vfI 91 (144)
T 2lj8_A 14 VSVADECVTALNDLRHK-KSRYVIMHIVDQKSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTNDG-PRDKLILI 91 (144)
T ss_dssp CEECHHHHHHHHHHTTT-SSSEEEEEEETTTEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSSS-SEEEEEEE
T ss_pred ceeCHHHHHHHHHHhcC-CceEEEEEEECCcEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCCC-CcccEEEE
Confidence 67899999999999976 47999999987 67777777777889999999999999999999999987655 57899999
Q ss_pred EEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 80 AWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 80 ~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
+|||++||+|+||+|||+|.+|++.|+|.+ +|+|+|++||+++.+.++|
T Consensus 92 ~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~-~i~a~d~~el~~e~i~~kl 140 (144)
T 2lj8_A 92 SWNPDSGAPRTKMLYSSSRDALVPLTQGFQ-GIQANDASGLDFEEISRKV 140 (144)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHHTTTSE-EEECCGGGTSCHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHhCCee-EEEeCChHHCCHHHHHHHH
Confidence 999999999999999999999999999886 8999999999999999986
No 13
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=100.00 E-value=5.9e-40 Score=226.36 Aligned_cols=125 Identities=32% Similarity=0.554 Sum_probs=114.4
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCC----ChHHHhhcC-CCCCceEEEEeeeeecCCCcccce
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGD----SYDDFTTSL-PADECRYAVYDFDFITHENCQKSK 75 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~----~~~el~~~L-~~~~p~y~ly~~~~~~~~~~~~~k 75 (130)
|.+++||.++|++|+.++ +||++|+|++++|+++++|+... +|++|++.| |+++|||++||+++.+.+ ++|
T Consensus 7 i~v~~e~~~~f~~~k~~k-~~~ii~~i~~~~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~~---~~k 82 (142)
T 1m4j_A 7 IQASEDVKEIFARARNGK-YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNAQ---GYE 82 (142)
T ss_dssp CCBCHHHHHHHHHHHTTT-CSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT---EEE
T ss_pred CeECHHHHHHHHHHhcCC-eEEEEEEEcCCEEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCCC---Cce
Confidence 579999999999999886 99999999999999998776553 478999887 689999999999987653 599
Q ss_pred EEEEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeE--EEEECCCCCCCHHHHHhhh
Q 045892 76 IFFIAWSPDPSKVRSKMVYASSKDRFKRELDGIQF--ELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~--~i~~~~~~dl~~~~~~~~~ 129 (130)
|+||+|||++||+|+||+|||||++|+++|+|+++ +|+|++++||+++++.+++
T Consensus 83 ~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~i~~~l 138 (142)
T 1m4j_A 83 WIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYL 138 (142)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCceeEEEEEeCChHHCCHHHHHHHH
Confidence 99999999999999999999999999999999888 9999999999999999986
No 14
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=223.19 Aligned_cols=123 Identities=29% Similarity=0.457 Sum_probs=112.3
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCC----ChHHHhhcC-CCCCceEEEEeeeeecCCCcccce
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGD----SYDDFTTSL-PADECRYAVYDFDFITHENCQKSK 75 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~----~~~el~~~L-~~~~p~y~ly~~~~~~~~~~~~~k 75 (130)
|.|+++|+++|++|+.++ +|||+|+|++++|++++.|+... +|++|++.| |+++|||++||+++.+.+ ++|
T Consensus 4 i~v~~e~~~~f~~~k~~k-~r~ii~~i~~~~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~~---~~k 79 (134)
T 2vac_A 4 IHATEELKEFFAKARAGS-VRLIKVVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNAQ---GFE 79 (134)
T ss_dssp CEECHHHHHHHHHHHHSS-CSEEEEEEETTEEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEETT---EEE
T ss_pred cEeCHHHHHHHHHHhcCC-eEEEEEEecCCEEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCCC---Cce
Confidence 679999999999999886 99999999999999998776553 478999988 689999999999987664 589
Q ss_pred EEEEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeE--EEEECCCCCCCHHHHHh
Q 045892 76 IFFIAWSPDPSKVRSKMVYASSKDRFKRELDGIQF--ELQATDPSEMSLDIIKE 127 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~--~i~~~~~~dl~~~~~~~ 127 (130)
|+||+|||++||+|+||+|||||.+|+++|+|+++ +|+|++++||+++.++.
T Consensus 80 ~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~~~~i~atd~~el~~~~~~~ 133 (134)
T 2vac_A 80 WLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLSFAGYQK 133 (134)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGGEEEEEEESSHHHHSHHHHHH
T ss_pred EEEEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCeeeEEEEeCChHHcCHHHHhc
Confidence 99999999999999999999999999999999887 99999999999999875
No 15
>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}
Probab=100.00 E-value=7.4e-38 Score=221.02 Aligned_cols=125 Identities=16% Similarity=0.373 Sum_probs=116.9
Q ss_pred ccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEE
Q 045892 2 AVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFI 79 (130)
Q Consensus 2 ~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI 79 (130)
+|+++|+++|++|+.+ +++||+|+|++ ++|++++++ +.+|++|.+.||+++|||++|++.+.+.++ ++.|++||
T Consensus 28 ~v~~e~~~a~~~lk~~-~~~~vifkId~~~~~I~v~~~~--~~~~~el~~~Lp~~~pRY~~y~~~~~~~~~-~~~k~vFI 103 (166)
T 2d8b_A 28 PISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANTE--NTELRDLPKRIPKDSARYHFFLYKHSHEGD-YLESVVFI 103 (166)
T ss_dssp CBCHHHHHHHHHHHTT-CCSCCEEEEETTTTEEEEEECC--CCCSTTHHHHSCSSCCEEEEEEEEEEETTE-EEEEEEEE
T ss_pred CcCHHHHHHHHHHHcC-CCcEEEEEEeCCCCEEEEEecC--CCCHHHHHHhCCCCCceEEEEeccccCCCC-ccccEEEE
Confidence 5999999999999987 79999999987 789998876 678999999999999999999999987766 69999999
Q ss_pred EEcCC-CCCchhhhhhhhhHHHHHhHcC---Ce--eEEEEECCCCCCCHHHHHhhhC
Q 045892 80 AWSPD-PSKVRSKMVYASSKDRFKRELD---GI--QFELQATDPSEMSLDIIKERAF 130 (130)
Q Consensus 80 ~w~P~-~a~v~~KMlyas~k~~l~~~l~---g~--~~~i~~~~~~dl~~~~~~~~~~ 130 (130)
+|||+ +|++|+||+|||+|.+|++.+. |+ +++|+|+|++||+++.|.++++
T Consensus 104 ~w~P~~~~~ik~KMlYAssk~~l~~~l~~~~Gi~v~~~iea~d~~El~~~~i~~kl~ 160 (166)
T 2d8b_A 104 YSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH 160 (166)
T ss_dssp EECCCSSSCHHHHHHHHHTTHHHHHHHTTSSCCCCSEEEEESSSTTCCHHHHHHHHH
T ss_pred EECCCCCCCHHHeeehhhhHHHHHHHHhhccCCceeEEEEeCChHHCCHHHHHHHhC
Confidence 99999 9999999999999999999999 87 8899999999999999999873
No 16
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=100.00 E-value=6.3e-39 Score=228.03 Aligned_cols=129 Identities=34% Similarity=0.668 Sum_probs=116.2
Q ss_pred CccCHHHHHHHHHhhcCC---------CceEEEEEEeC--cEEEEeec--------CCC-CCChHHHhhcCCCCCceEEE
Q 045892 1 MAVHDDCKLKFMELKAKR---------NYRFIIFKIDN--QQVVVEKL--------GSP-GDSYDDFTTSLPADECRYAV 60 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~---------~~~~vi~~i~~--~~i~v~~~--------~~~-~~~~~el~~~L~~~~p~y~l 60 (130)
|.|++||+++|++|+.++ .+|||+|+|++ ..|++++. |++ .++|++|++.||+++|||++
T Consensus 14 i~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~~L~~~~prY~l 93 (174)
T 1ak6_A 14 VQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPEKDCRYAL 93 (174)
T ss_dssp CCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHHTSCSSCCCCEE
T ss_pred CccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHHhCCCCCcEEEE
Confidence 578999999999999884 58899999987 56777652 222 57899999999999999999
Q ss_pred EeeeeecCCCcccceEEEEEEcCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhhC
Q 045892 61 YDFDFITHENCQKSKIFFIAWSPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERAF 130 (130)
Q Consensus 61 y~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~~ 130 (130)
||++|.+.+| .+++|+||+|||++|++|+||+|||+|.+|++.|+|++++|+|++++||+++.+.++|.
T Consensus 94 y~~~~~~~~~-~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~~i~atd~~El~~e~i~~kl~ 162 (174)
T 1ak6_A 94 YDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKLG 162 (174)
T ss_dssp CCCCCCCSSC-SCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSCCEEESSTTTTCHHHHHHHTT
T ss_pred EeCcccCCCC-ccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeEEEEECChhhcCHHHHHHHhc
Confidence 9999877765 79999999999999999999999999999999999999999999999999999999873
No 17
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=100.00 E-value=2.9e-37 Score=212.52 Aligned_cols=120 Identities=15% Similarity=0.365 Sum_probs=112.0
Q ss_pred CHHHHHHHHHhhcCC--CceEEEEEEeC-cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEE
Q 045892 4 HDDCKLKFMELKAKR--NYRFIIFKIDN-QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIA 80 (130)
Q Consensus 4 s~e~~~a~~~~~~~~--~~~~vi~~i~~-~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~ 80 (130)
+++|.++|++|+.++ +++||+|+|++ ++|+++.+|+ +|++|++.||+++|||++|++. .+|+.++|++||+
T Consensus 12 ~~e~~~a~~~~~~~~~~~~~~ii~~i~~~~~i~v~~~g~---~~~el~~~l~~~~~rY~~~~~~---~~~~~~~k~vfI~ 85 (141)
T 1hqz_1 12 SREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGS---SFHDFLQLFDETKVQYGLARVS---PPGSDVEKIIIIG 85 (141)
T ss_dssp HHHHHHHHHHHHHTCCTTCCEEEEEECTTSCEEEEEEES---CHHHHHTCCCTTSCEEEEEEEC---CTTCSCCEEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCceEEEEEEcCCCEEEEEeecC---CHHHHHhhCCCCceEEEEEEEe---cCCCceeeEEEEE
Confidence 599999999999875 79999999998 8899988764 8999999999999999999997 4467899999999
Q ss_pred EcCCCCCchhhhhhhhhHHHHHh-HcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 81 WSPDPSKVRSKMVYASSKDRFKR-ELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 81 w~P~~a~v~~KMlyas~k~~l~~-~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
|||++||+|+||+|||++.+|++ .|+|++++|++++++||+++.|.+++
T Consensus 86 w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~~i~a~~~~el~~e~i~~kl 135 (141)
T 1hqz_1 86 WCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKI 135 (141)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHHTSCSCSEEEEESSGGGGCHHHHHHHH
T ss_pred ECCCCCChhheEEEeccHHHHHHHhCCceEEEEEECChHHCCHHHHHHHH
Confidence 99999999999999999999997 99999999999999999999999987
No 18
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=100.00 E-value=1.1e-36 Score=214.52 Aligned_cols=126 Identities=16% Similarity=0.364 Sum_probs=115.5
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeC--cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDN--QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFF 78 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~--~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vf 78 (130)
++|+++|.++|++|+.+ ..+||+|+|++ ++|+|++. .+.+|++|.+.||+++|||++|++++.+. |+...+++|
T Consensus 22 ~~v~~e~~~a~~~lk~~-~~~~iifkId~~~e~I~v~~~--~~~~~~df~~~Lp~~~pRY~vyd~~~~~~-g~~~~~~if 97 (164)
T 3daw_B 22 FPISRDAFQALEKLSKK-QLNYVQLEIDIKNETIILANT--ENTELRDLPKRIPKDSARYHFFLYKHSHE-GDYLESVVF 97 (164)
T ss_dssp CCBCHHHHHHHHHHHTT-SCSEEEEEEETTTTEEEEEEC--CCCCGGGSGGGSCSSSCEEEEEEEEEEET-TEEEEEEEE
T ss_pred EEECHHHHHHHHHHHcC-CceEEEEEEeCCCCEEEEEeC--CCCCHHHHHHhCCccCceEEEEecccccC-CCccccEEE
Confidence 37899999999999987 58999999986 68999886 35899999999999999999999999766 656778999
Q ss_pred EEEcCC-CCCchhhhhhhhhHHHHHhHcC---Ce--eEEEEECCCCCCCHHHHHhhhC
Q 045892 79 IAWSPD-PSKVRSKMVYASSKDRFKRELD---GI--QFELQATDPSEMSLDIIKERAF 130 (130)
Q Consensus 79 I~w~P~-~a~v~~KMlyas~k~~l~~~l~---g~--~~~i~~~~~~dl~~~~~~~~~~ 130 (130)
|+|||+ +|++|+||+|||+|.+|++.+. |+ +++||++|++||+++.+.++|+
T Consensus 98 i~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i~k~iea~d~~Elt~e~l~ekl~ 155 (164)
T 3daw_B 98 IYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIEIDNGDELTADFLYDEVH 155 (164)
T ss_dssp EEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCEEEEEEESSSSSCCHHHHHHHHS
T ss_pred EEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCceeEEEEeCChHHcCHHHHHhHhC
Confidence 999999 9999999999999999999997 77 8899999999999999999985
No 19
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=100.00 E-value=7.7e-37 Score=210.21 Aligned_cols=112 Identities=42% Similarity=0.809 Sum_probs=103.5
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIA 80 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~ 80 (130)
|+++++|+++|++|+.++++|||+|+|++++|+++++++ + +|++|++.||+++|||++|| +| ++|+||+
T Consensus 26 i~vs~e~~~af~~lk~~k~~~~ii~~I~~~eivv~~~g~-~-~~~el~~~Lp~~~prY~~y~------dg---~k~vFI~ 94 (139)
T 2l72_A 26 MGVDENCVARFNELKIRKTVKWIVFKIENTKIVVEKDGK-G-NADEFRGALPANDCRFGVYD------CG---NKIQFVL 94 (139)
T ss_dssp CEECHHHHHHHHHHTTTTCCCEEEEEEETTEEEEEEEES-S-HHHHHHHHCCCCSCCEEEEE------CS---SCEEEEE
T ss_pred CCcCHHHHHHHHHHhCCCCeeEEEEEEcCCEEEEeecCC-C-CHHHHHHhCCCCCcEEEEEc------CC---CcEEEEE
Confidence 468999999999999887799999999998899988776 4 89999999999999999999 23 8999999
Q ss_pred EcCCCCCchhhhhhhhhHHHHHhHcCCeeEE-EEECCCCCCCHH
Q 045892 81 WSPDPSKVRSKMVYASSKDRFKRELDGIQFE-LQATDPSEMSLD 123 (130)
Q Consensus 81 w~P~~a~v~~KMlyas~k~~l~~~l~g~~~~-i~~~~~~dl~~~ 123 (130)
|||++|++|+||+|||+|++|++.|+|+++. +++++++||+++
T Consensus 95 w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v~~iea~~~~DLte~ 138 (139)
T 2l72_A 95 WCPDNAPVKPRMTYASSKDALLKKLDGATAVALEAHEMGDLAPL 138 (139)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHHHCSCCSCEEEESSTTTTSCC
T ss_pred ECCCCCChhHeeehHhhHHHHHHHhCCceEEEEEeCCHHHCccC
Confidence 9999999999999999999999999998775 999999999865
No 20
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=208.50 Aligned_cols=120 Identities=15% Similarity=0.269 Sum_probs=111.9
Q ss_pred HHHHHHHHHhhcCC-CceEEEEEEeCc--EEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEE
Q 045892 5 DDCKLKFMELKAKR-NYRFIIFKIDNQ--QVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAW 81 (130)
Q Consensus 5 ~e~~~a~~~~~~~~-~~~~vi~~i~~~--~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w 81 (130)
++|.++|++++.++ .+||++|+|+++ +|++..+|+ ++|+||++.|++++|||++||+.+ +++.++|++||.|
T Consensus 17 ~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~--~~~~e~~~~L~~~~~~Y~~~r~~~---~~~~~~K~vfI~W 91 (146)
T 1x67_A 17 PALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGE--GGLEEMVEELNSGKVMYAFCRVKD---PNSGLPKFVLINW 91 (146)
T ss_dssp HHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEES--SCHHHHHHHCCTTSEEEEEEEEEC---SSSCSEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccC--CCHHHHHhhCCCCceEEEEEEEEc---CCCCeeeEEEEEE
Confidence 99999999999986 499999999884 899988774 589999999999999999999984 3567999999999
Q ss_pred cCCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 82 SPDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 82 ~P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
|||++|+|+||+||+++.+|++.|+|++++|+|++++||+++.|.+++
T Consensus 92 ~pd~a~v~~Km~yas~k~~lk~~l~g~~~ei~at~~~el~~~~i~~k~ 139 (146)
T 1x67_A 92 TGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIMEKV 139 (146)
T ss_dssp ECTTSCHHHHHHHHHHHHHHHHHTTTEEEEECCCSGGGGCHHHHHHHH
T ss_pred CCCCCChhheeeehhhHHHHHHhcCCcEEEEEeCChHHCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999886
No 21
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=100.00 E-value=1.6e-37 Score=209.95 Aligned_cols=112 Identities=26% Similarity=0.581 Sum_probs=103.8
Q ss_pred CccCHHHHHHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCC---ceEEEEeeeeecCCCcccceEE
Q 045892 1 MAVHDDCKLKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADE---CRYAVYDFDFITHENCQKSKIF 77 (130)
Q Consensus 1 i~vs~e~~~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~---p~y~ly~~~~~~~~~~~~~k~v 77 (130)
|.+++||+++|++|+.++++|||+|+|++++|+|++.++ ..+|++|++.||+++ |||++|++ +++++
T Consensus 7 i~vs~e~~~~f~~lk~~k~~~~ii~kI~~~~ivv~~~~~-~~~~~~f~~~Lp~~~~~~prY~vy~~---------~~k~v 76 (124)
T 3q2b_A 7 IRVNDNCVTEFNNMKIRKTCGWIIFVIQNCEIIIHSKGA-STTLTELVQSIDKNNEIQCAYVVFDA---------VSKIH 76 (124)
T ss_dssp CEECHHHHHHHHHHHHHTSSEEEEEEEETTEEEEEEEEE-CSCHHHHHHHHHHCTTCSEEEEEEEC---------SSCEE
T ss_pred CccCHHHHHHHHHHhcCCCcEEEEEEEcCCEEEEeccCC-CCCHHHHHHHccccCCCCcEEEEEec---------CCCEE
Confidence 579999999999999987899999999999999988764 478999999999999 99999988 46999
Q ss_pred EEEEcCCCCCchhhhhhhhhHHHHHhHcCCee-EEEEECCCCCCCH
Q 045892 78 FIAWSPDPSKVRSKMVYASSKDRFKRELDGIQ-FELQATDPSEMSL 122 (130)
Q Consensus 78 fI~w~P~~a~v~~KMlyas~k~~l~~~l~g~~-~~i~~~~~~dl~~ 122 (130)
||+|||++|++|+||+|||||.+|++.|+|++ .+++++|++||++
T Consensus 77 fI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~~~i~a~d~~dlt~ 122 (124)
T 3q2b_A 77 FFMYARESSNSRDRMTYASSKQAILKKIEGVNVLTSVIESAQDVAD 122 (124)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEECCSCBCSHHHHTT
T ss_pred EEEECCCCCChhHhhhhHHHHHHHHHHhCCCceEEEEecCHHHccc
Confidence 99999999999999999999999999999998 5899999999874
No 22
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=100.00 E-value=9e-35 Score=200.34 Aligned_cols=122 Identities=19% Similarity=0.331 Sum_probs=113.7
Q ss_pred CHHHHHHHHHhhcCC-CceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEEc
Q 045892 4 HDDCKLKFMELKAKR-NYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAWS 82 (130)
Q Consensus 4 s~e~~~a~~~~~~~~-~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w~ 82 (130)
+|+|.++|++++.++ .++|++|++++++|+|..+|+ +|+||++.|++++|||++||+. ..++++.+.|++||.||
T Consensus 6 ~~~~~~a~~~v~~~~~~~~wilf~~~~~~i~v~~~G~---g~~e~~~~L~~~~~~Ya~~r~~-~~~~~~~~~K~vfI~W~ 81 (141)
T 1t3y_A 6 KEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGA---EYQHFIQQCTDDVRLFAFVRFT-TGDAMSKRSKFALITWI 81 (141)
T ss_dssp HHHHHHHHHHHHCTTSSCCEEEEEEETTEEEEEEEES---SHHHHHHHCCTTCEEEEEEEEE-ECSGGGCEEEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCCceEEEEEEcCCEEEEEecCC---CHHHHHhhCCCCceEEEEEEEE-ecCCCCceeeEEEEEEC
Confidence 589999999999886 599999999998899988875 4999999999999999999996 44667789999999999
Q ss_pred CCCCCchhhhhhhhhHHHHHhHcCCeeEEEEECCCCCCCHHHHHhhh
Q 045892 83 PDPSKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSLDIIKERA 129 (130)
Q Consensus 83 P~~a~v~~KMlyas~k~~l~~~l~g~~~~i~~~~~~dl~~~~~~~~~ 129 (130)
|+++|++.||+||+++.+|++.|.|++++|+|++++||+++.|.+|+
T Consensus 82 pd~~~~~~K~~~as~k~~vk~~l~g~~~~i~a~d~~el~~~~I~~kv 128 (141)
T 1t3y_A 82 GENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSEL 128 (141)
T ss_dssp CTTSCHHHHHHHHHHHHHHTTTSCCCSEEEEECSGGGGSHHHHHHHH
T ss_pred CCCCCHHHhhhHHHHHHHHHHHhcccEEEEEeCChHHCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999886
No 23
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=75.21 E-value=11 Score=24.37 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=52.1
Q ss_pred HhhcCCCceEEEEEEeC-cEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEEcCCCCCchhh
Q 045892 13 ELKAKRNYRFIIFKIDN-QQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKVRSK 91 (130)
Q Consensus 13 ~~~~~~~~~~vi~~i~~-~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~~K 91 (130)
.|-..+....-+.+|++ +.+.+.+.. .-.+-+.+| |++..- +. ..| +....+-+|....|+..++
T Consensus 9 ~~~d~~~~~l~vWrIe~~~~~~vp~~~---------~G~Fy~gd~-YIvl~t-~~-~~g--~~~~~i~~W~G~~ss~de~ 74 (126)
T 2vik_A 9 GKLDKTTPGIQIWRIENMEMVPVPTKS---------YGNFYEGDC-YVLLST-RK-TGS--GFSYNIHYWLGKNSSQDEQ 74 (126)
T ss_dssp TSSCSSCCEEEEEECGGGSCCEECTTT---------TTCCCSSSC-EEEEEE-EE-CSS--SEEEEEEEEECTTSCHHHH
T ss_pred CCcCcCCCCEEEEEEeCCEEEECChhh---------cCeeCCCCe-EEEEEe-cc-CCC--ceeEEEEEEeCCCCCchhH
Confidence 34444455667777876 333332211 122444555 666542 32 222 4578899999999999999
Q ss_pred hhhhhhHHHHHhHcCCe
Q 045892 92 MVYASSKDRFKRELDGI 108 (130)
Q Consensus 92 Mlyas~k~~l~~~l~g~ 108 (130)
..-|.-...|.+.++|.
T Consensus 75 g~Aa~~aveLd~~lgg~ 91 (126)
T 2vik_A 75 GAAAIYTTQMDEYLGSV 91 (126)
T ss_dssp HHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 98888888888888773
No 24
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=66.40 E-value=26 Score=23.30 Aligned_cols=86 Identities=9% Similarity=0.124 Sum_probs=54.8
Q ss_pred HHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEEcCCCCCc
Q 045892 9 LKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKV 88 (130)
Q Consensus 9 ~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v 88 (130)
.+|++... ....-+.+|++..++..... . .-.+-+.+| |++.. .|....| +....+-+|+...|+.
T Consensus 6 ~~f~~~g~--~~gl~VWrIe~~~~~~vp~~----~----~G~Fy~gd~-YIvl~-ty~~~~g--~~~~~i~~W~G~~ss~ 71 (147)
T 1t44_G 6 PEFLKAGK--EPGLQIWRVEKFDLVPVPTN----L----YGDFFTGDA-YVILK-TVQLRNG--NLQYDLHYWLGNECSQ 71 (147)
T ss_dssp HHHHHTTS--SSEEEEEEEETTEEEECCGG----G----TTEEETTCE-EEEEE-EEECTTS--CEEEEEEEEECTTCCH
T ss_pred hhhhccCC--CCCeEEEEEeCCEEEECChH----H----cCeecCCCe-EEEEE-EEecCCC--ceEEEEEEEeCCCCCh
Confidence 45666554 35677888988544433211 1 122333455 66543 2222222 5578899999999999
Q ss_pred hhhhhhhhhHHHHHhHcCCe
Q 045892 89 RSKMVYASSKDRFKRELDGI 108 (130)
Q Consensus 89 ~~KMlyas~k~~l~~~l~g~ 108 (130)
.++...|.-...|.+.|+|.
T Consensus 72 de~g~Aa~~aveLd~~lgg~ 91 (147)
T 1t44_G 72 DESGAAAIFTVQLDDYLNGR 91 (147)
T ss_dssp HHHHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHHHcCCC
Confidence 99998888888888888774
No 25
>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}
Probab=57.82 E-value=40 Score=25.07 Aligned_cols=86 Identities=10% Similarity=0.142 Sum_probs=53.2
Q ss_pred HHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEEcCCCCCc
Q 045892 9 LKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKV 88 (130)
Q Consensus 9 ~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v 88 (130)
.+|+..... .-.-|-+|++-.++..... .+ -.+=..+| |++..-. ....| +..+.+-+|+...++.
T Consensus 24 ~~~~~~g~~--~Gl~iWrIe~~~~~~v~~~----~~----G~Fy~gd~-Yivl~t~-~~~~g--~~~~~i~~W~G~~ss~ 89 (297)
T 3tu5_B 24 PEFLKAGKE--PGLQIWRVEKFDLVPVPTN----LY----GDFFTGDA-YVILKTV-QLRNG--NLQYDLHYWLGNECSQ 89 (297)
T ss_dssp HHHHHTTSS--SEEEEEEEETTEEEECCGG----GT----TEEETTCE-EEEEEEE-ECTTS--CEEEEEEEEECTTCCH
T ss_pred hhHhccCCC--CceEEEEEcCCEEEECCHH----Hc----CeecCCCe-EEEeEeE-ECCCC--ceeEEEEEEeCCCCCh
Confidence 356555443 3356778888444432211 11 22333444 7665432 22222 4567888999999999
Q ss_pred hhhhhhhhhHHHHHhHcCCe
Q 045892 89 RSKMVYASSKDRFKRELDGI 108 (130)
Q Consensus 89 ~~KMlyas~k~~l~~~l~g~ 108 (130)
.++..-|.-...|...|+|-
T Consensus 90 de~g~aa~~av~Ld~~lgg~ 109 (297)
T 3tu5_B 90 DESGAAAIFTVQLDDYLNGR 109 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHHHcCCC
Confidence 99988888888888889874
No 26
>2ygw_A Malonyl-COA decarboxylase, mitochondrial; lyase; 2.80A {Homo sapiens}
Probab=39.78 E-value=15 Score=29.13 Aligned_cols=35 Identities=6% Similarity=-0.009 Sum_probs=27.4
Q ss_pred CCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEE
Q 045892 41 GDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAW 81 (130)
Q Consensus 41 ~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w 81 (130)
-.+|+||..-|.++.-||++|+.... ..++|||--
T Consensus 191 I~~W~DLkrRL~pdRRCfaFFHp~mP------~EPLIfVeV 225 (460)
T 2ygw_A 191 VKNWMDMKRRVGPYRRCYFFSHCSTP------GEPLVVLHV 225 (460)
T ss_dssp CCSHHHHHHHTSTTEEEEEEEETTBT------TCCSEEEEE
T ss_pred cCCHHHHHHhcCCCCeEEEecCCCCC------CCCeEEEee
Confidence 46899999999989999999987643 456777654
No 27
>1fmd_1 Foot-and-mouth disease virus (subunit VP1); icosahedral virus; 3.50A {Foot-and-mouth disease virus} SCOP: b.121.4.1 PDB: 1qgc_1 1qgc_5
Probab=39.59 E-value=39 Score=23.93 Aligned_cols=30 Identities=17% Similarity=0.388 Sum_probs=20.3
Q ss_pred CceEEEEeeeeecCCCcccceEEEEEEcCCCCCchh
Q 045892 55 ECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKVRS 90 (130)
Q Consensus 55 ~p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~~ 90 (130)
-.-|..+|++..- ... .-|+|+|.|||+..
T Consensus 68 ~FTY~rfDlEvtv-----v~~-~qvmyvPpGaP~p~ 97 (208)
T 1fmd_1 68 AATYYFSDLEIAV-----THT-GKLTWVPNGAPVSA 97 (208)
T ss_dssp TEEEEEEEEEEEE-----EEE-EEEEEECTTCCGGG
T ss_pred ccEEEeccEEEEE-----EEe-eEEEEECCCCCchh
Confidence 3457777776541 111 58999999999874
No 28
>1ncq_A Coat protein VP1; HRV, pleconaril, icosahedral virus; HET: W11; 2.50A {Human rhinovirus 14} SCOP: b.121.4.1 PDB: 1d3i_1* 1hrv_1* 1hri_1* 1na1_A* 1k5m_A* 1r08_1* 1r09_1* 1rvf_1 1vrh_1* 2hwb_1* 2hwc_1* 2r04_1* 2r06_1* 2r07_1* 2rm2_1* 2rr1_1* 2rs1_1* 2rs3_1* 2rs5_1* 4rhv_1 ...
Probab=38.91 E-value=44 Score=24.77 Aligned_cols=15 Identities=7% Similarity=0.113 Sum_probs=12.3
Q ss_pred EEEEEEcCCCCCchh
Q 045892 76 IFFIAWSPDPSKVRS 90 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~ 90 (130)
.+-|+|+|.|||+-.
T Consensus 147 ~~qvmyvPpGaP~p~ 161 (289)
T 1ncq_A 147 VVQAMYVPPGAPNPK 161 (289)
T ss_dssp EEEEEEECTTSCCCC
T ss_pred EEEEEEeCCCCCCCc
Confidence 456999999999764
No 29
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=36.93 E-value=1.3e+02 Score=22.40 Aligned_cols=74 Identities=16% Similarity=0.292 Sum_probs=47.0
Q ss_pred eEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEE-EeeeeecCCCcccceEEEEEEcCCCCCchhhhhhhhhHH
Q 045892 21 RFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAV-YDFDFITHENCQKSKIFFIAWSPDPSKVRSKMVYASSKD 99 (130)
Q Consensus 21 ~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~l-y~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KMlyas~k~ 99 (130)
..-+.+|++...+.... +....+-+.+| |++ |.+. ..+ +....+.+|+...|+..++..-|.-..
T Consensus 8 ~~~vwrIe~~~~~~v~~--------~~~G~Fy~gD~-YIvl~ty~---~~~--~~~~~i~~W~G~~ss~de~~~aa~~~~ 73 (344)
T 2fh1_A 8 QKQIWRIEGSNKVPVDP--------ATYGQFYGGDS-YIILYNYR---HGG--RQGQIIYNWQGAQSTQDEVAASAILTA 73 (344)
T ss_dssp EEEEEEEETTEEEECCG--------GGTTEEETTSE-EEEEEEEE---ETT--EEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred CEEEEEEcCCeEEECCH--------HHcCeecCCCe-EEEEEEee---cCC--CceEEEEEEecCCCCHhHHHHHHHHHH
Confidence 56677888744333221 11223444555 666 4443 122 356788999999999999987777667
Q ss_pred HHHhHcCCe
Q 045892 100 RFKRELDGI 108 (130)
Q Consensus 100 ~l~~~l~g~ 108 (130)
.|...++|-
T Consensus 74 ~ld~~lgg~ 82 (344)
T 2fh1_A 74 QLDEELGGT 82 (344)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHhCCC
Confidence 777888763
No 30
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=36.74 E-value=92 Score=20.69 Aligned_cols=85 Identities=9% Similarity=0.126 Sum_probs=54.2
Q ss_pred HHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEE-EeeeeecCCCcccceEEEEEEcCCCCC
Q 045892 9 LKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAV-YDFDFITHENCQKSKIFFIAWSPDPSK 87 (130)
Q Consensus 9 ~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~l-y~~~~~~~~~~~~~k~vfI~w~P~~a~ 87 (130)
.+|++... ....-+.+|++...+..... . .-.+-+.+| |++ |.+. ...| +....+-+|+...|+
T Consensus 28 ~~f~~~g~--~~gl~VWrIe~~~~v~vp~~----~----~G~FysgD~-YIVl~ty~--~~~g--~~~~~IyfW~G~~ss 92 (150)
T 2ff3_A 28 PEFLKAGK--EPGLQIWRVEKFDLVPVPTN----L----YGDFFTGDA-YVILKTVQ--LRNG--NLQYDLHYWLGNECS 92 (150)
T ss_dssp HHHHHTTS--SSEEEEEEEETTEEEECCGG----G----TTEEETTSE-EEEEEEEE--CTTS--SEEEEEEEEECTTCC
T ss_pred hhhhccCC--CCCeEEEEEeCCEEEECChH----H----cCeecCCCe-EEEEEEEe--cCCC--ceEEEEEEEeCCCCC
Confidence 45666543 35677888888544432211 1 122333555 664 4342 2222 557889999999999
Q ss_pred chhhhhhhhhHHHHHhHcCCe
Q 045892 88 VRSKMVYASSKDRFKRELDGI 108 (130)
Q Consensus 88 v~~KMlyas~k~~l~~~l~g~ 108 (130)
..++...|.-...|.+.|+|.
T Consensus 93 ~de~gaAA~~aveLd~~lgg~ 113 (150)
T 2ff3_A 93 QDESGAAAIFTVQLDDYLNGR 113 (150)
T ss_dssp HHHHHHHHHHHHHHHHHTTTC
T ss_pred chhHHHHHHHHHHHHHHcCCC
Confidence 999998888777888888774
No 31
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=36.11 E-value=1.3e+02 Score=22.69 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=27.6
Q ss_pred eEEEEEEcCCCCCchhhhhhhhhHHHHHhHcCCe
Q 045892 75 KIFFIAWSPDPSKVRSKMVYASSKDRFKRELDGI 108 (130)
Q Consensus 75 k~vfI~w~P~~a~v~~KMlyas~k~~l~~~l~g~ 108 (130)
...+.+|+...|+..++..-|.-...|...++|-
T Consensus 90 ~~~i~~W~G~~ss~de~g~aa~~~v~Ld~~lgg~ 123 (371)
T 3fg6_A 90 GQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQ 123 (371)
T ss_dssp CEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTSC
T ss_pred CeEEEEeeCCCCChhHHHHHHHHHHHHHHHcCCC
Confidence 4667789999999999887777667787888763
No 32
>3vbh_A EV71, genome polyprotein, capsid protein VP1; hand-foot-and-mouth disease, enterovirus uncoating, P factor, adaptor-sensor; HET: SPH; 2.30A {Human enterovirus 71} PDB: 3vbf_A* 3vbo_A 3vbs_A* 4aed_A* 3vbr_A 3vbu_A
Probab=35.95 E-value=52 Score=24.56 Aligned_cols=35 Identities=11% Similarity=0.213 Sum_probs=20.1
Q ss_pred ceEEEEeeeee---c-CCCcccceEEEEEEcCCCCCchh
Q 045892 56 CRYAVYDFDFI---T-HENCQKSKIFFIAWSPDPSKVRS 90 (130)
Q Consensus 56 p~y~ly~~~~~---~-~~~~~~~k~vfI~w~P~~a~v~~ 90 (130)
--|.-+|+++. + ..+....-.+-|+|+|.|||+-.
T Consensus 126 FTY~RfDlEvT~V~t~~~~~~~~~~~QvmyvPpGaP~p~ 164 (297)
T 3vbh_A 126 FTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPD 164 (297)
T ss_dssp EEEEEEEEEEEEEEECTTSCCCCCEEEEEEECTTSCCCC
T ss_pred eEEEeeeeEEEEEEecCCCCCCceEEEEEEcCCCCCCCC
Confidence 45666665543 1 11111233466999999999654
No 33
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=31.10 E-value=1.1e+02 Score=19.68 Aligned_cols=87 Identities=9% Similarity=0.137 Sum_probs=55.4
Q ss_pred HHHHHhhcCCCceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEEcCCCCCc
Q 045892 9 LKFMELKAKRNYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKV 88 (130)
Q Consensus 9 ~a~~~~~~~~~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v 88 (130)
.+|++... ....-+-+|++...+..... ..-.+-+.+| |++.. .+....| +....+-+|+...|+.
T Consensus 9 ~~~~~~g~--~~gl~vWrIe~~~~~~vp~~--------~~G~Fy~gd~-YIvl~-ty~~~~g--~~~~~i~~W~G~~ss~ 74 (128)
T 3cip_G 9 PEFLKAGK--EPGLQIWRVEKFDLVPVPTN--------LYGDFFTGDA-YVILK-TVQLRNG--NLQYDLHYWLGNECSQ 74 (128)
T ss_dssp HHHHHTTS--SSEEEEEEEETTEEEECCGG--------GTTEEETTCE-EEEEE-EEECTTS--CEEEEEEEEECTTCCH
T ss_pred hhHHhcCC--CCCeEEEEEeCCEEEECChH--------HcCeecCCCe-EEEEE-EEecCCC--ceEEEEEEEcCCCCCc
Confidence 45666554 35677888988544433211 1122333455 66543 2222222 5577899999999999
Q ss_pred hhhhhhhhhHHHHHhHcCCee
Q 045892 89 RSKMVYASSKDRFKRELDGIQ 109 (130)
Q Consensus 89 ~~KMlyas~k~~l~~~l~g~~ 109 (130)
.++...|.-...|.+.|+|..
T Consensus 75 de~g~Aa~~aveLd~~lgg~~ 95 (128)
T 3cip_G 75 DESGAAAIFTVQLDDYLNGRA 95 (128)
T ss_dssp HHHHHHHHHHHHHHHHTTTCE
T ss_pred chHHHHHHHHHHHHHHcCCCc
Confidence 999988888888888898743
No 34
>1tme_1 Theiler'S murine encephalomyelitis virus (subunit VP1); icosahedral virus; 2.80A {Theiler} SCOP: b.121.4.1 PDB: 1tmf_1
Probab=30.78 E-value=55 Score=24.11 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=19.7
Q ss_pred eEEEEeeeeecCCCcccceEEEEEEcCCCCCch
Q 045892 57 RYAVYDFDFITHENCQKSKIFFIAWSPDPSKVR 89 (130)
Q Consensus 57 ~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~ 89 (130)
-|..+|++..=.......-.+-|+|+|.|||+.
T Consensus 121 TY~rfDLEvTvv~~~~~~~~~qvmyvPpGaP~p 153 (274)
T 1tme_1 121 TYYKCDLEVTVSALGTDTVASVLRWAPTGAPAD 153 (274)
T ss_dssp EEEEEEEEEEEEECSCSCCEEEEEEECTTCCCC
T ss_pred eEecccEEEEEEEcCCCCceEEEEEcCCCCCCC
Confidence 566666665311111112235799999999987
No 35
>1z7s_1 Human coxsackievirus A21; picornavirus, capsid protein, viral protein, icosahedral virus; HET: MYR G; 3.20A {Human coxsackievirus A21} PDB: 1z7z_1*
Probab=30.30 E-value=72 Score=23.72 Aligned_cols=15 Identities=20% Similarity=0.364 Sum_probs=12.3
Q ss_pred EEEEEEcCCCCCchh
Q 045892 76 IFFIAWSPDPSKVRS 90 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~ 90 (130)
.+-|+|+|.|||+-.
T Consensus 149 ~~qvmyvPpGAP~p~ 163 (298)
T 1z7s_1 149 VYQIMYIPPGAPRPS 163 (298)
T ss_dssp EEEEEEECTTSCCCS
T ss_pred EEEEEEcCCCCCCCC
Confidence 356999999999764
No 36
>1qqp_1 FMDV, protein (genome polyprotein); heparan sulphate, virus-receptor interactions/protein carbohydrate interactions; HET: IDX SGN IDS; 1.90A {Foot-and-mouth disease virus} SCOP: b.121.4.1 PDB: 1bbt_1 1fod_1
Probab=29.54 E-value=22 Score=25.32 Aligned_cols=29 Identities=14% Similarity=0.374 Sum_probs=19.1
Q ss_pred ceEEEEeeeeecCCCcccceEEEEEEcCCCCCchh
Q 045892 56 CRYAVYDFDFITHENCQKSKIFFIAWSPDPSKVRS 90 (130)
Q Consensus 56 p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~~ 90 (130)
.-|..+|++..=. .. .=++|+|.|||+..
T Consensus 69 fTY~rfDlEvTvv-----~~-~qvmwvPpGAP~p~ 97 (213)
T 1qqp_1 69 STYYFSDLEIAVK-----HE-GDLTWVPNGAPEKA 97 (213)
T ss_dssp EEEEEEEEEEEEE-----EE-SCEEEECTTCCGGG
T ss_pred cEEEeeeEEEEEE-----Ec-cEEEEECCCCCCcc
Confidence 3577777765311 11 36899999999876
No 37
>2mev_1 Mengo virus coat protein (subunit VP1); cardio picornavirus coat protein, icosahedral virus; 3.00A {Mengo virus} SCOP: b.121.4.1 PDB: 1mec_1
Probab=28.51 E-value=54 Score=24.21 Aligned_cols=33 Identities=12% Similarity=0.362 Sum_probs=18.9
Q ss_pred eEEEEeeeeecCCCcccceEEEEEEcCCCCCch
Q 045892 57 RYAVYDFDFITHENCQKSKIFFIAWSPDPSKVR 89 (130)
Q Consensus 57 ~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~ 89 (130)
-|..+|++..=.......--.-|+|+|.|||+.
T Consensus 121 TY~rfDLEvtvv~~~~~~~~~~vmyvPpGaP~~ 153 (277)
T 2mev_1 121 VYYKCDLEVTLSPHTSGAHGLLVRWCPTGTPTK 153 (277)
T ss_dssp SEEEEEEEEEEEESCSSCCCEEEEEECTTSCCC
T ss_pred eEecccEEEEEEEcCCCCcceEEEECCCCCCCC
Confidence 577777765411110001113599999999985
No 38
>1vs0_A Putative DNA ligase-like protein RV0938/MT0965; OB fold, nucleotidyl transferase, structural genomic protein structure initiative; HET: APK MSE; 2.40A {Mycobacterium tuberculosis}
Probab=28.43 E-value=71 Score=23.50 Aligned_cols=38 Identities=16% Similarity=0.391 Sum_probs=27.1
Q ss_pred EeCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeee
Q 045892 27 IDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFI 66 (130)
Q Consensus 27 i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~ 66 (130)
+++|-+..+..+ ..+|..+...+....++|.+||+-+-
T Consensus 78 LDGElv~~d~~g--~~~F~~l~~r~~~~~~~~~vFDll~~ 115 (310)
T 1vs0_A 78 LDGEAVVLDSSG--VPSFSQMQNRGRDTRVEFWAFDLLYL 115 (310)
T ss_dssp EEEEEECBCTTS--CBCHHHHHTCCTTSCCEEEEEEEEEE
T ss_pred EeeEEEEECCCC--CcCHHHHHhhccCCcEEEEEEEeEEE
Confidence 355555444433 23799998888877899999999865
No 39
>1aym_1 HRV16, human rhinovirus 16 coat protein; RNA, site-directed mutagenesis, icosahedral virus; HET: MYR DAO; 2.15A {Human rhinovirus SP} SCOP: b.121.4.1 PDB: 1ayn_1* 1c8m_1* 1ncr_A* 1nd2_A* 1nd3_A* 1qju_1* 1qjx_1* 1qjy_1* 1d3e_1 1fpn_1* 1v9u_1* 3dpr_A* 3tn9_1 1r1a_1* 2hwd_1* 2hwe_1* 2hwf_1*
Probab=27.44 E-value=90 Score=23.08 Aligned_cols=16 Identities=6% Similarity=0.281 Sum_probs=12.6
Q ss_pred EEEEEEcCCCCCchhh
Q 045892 76 IFFIAWSPDPSKVRSK 91 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~K 91 (130)
.+-|+|+|.|||+-.+
T Consensus 139 ~~qvmyvPPGap~p~~ 154 (285)
T 1aym_1 139 VMQYMYVPPGAPIPTT 154 (285)
T ss_dssp EEEEEEECTTSCCCSS
T ss_pred EEEEEEcCCCCCCCCc
Confidence 3569999999997643
No 40
>1zba_1 Coat protein VP1; oligosaccharide receptor, virus/viral protein, icosahedral V virus; HET: SGN IDS; 2.00A {Foot-and-mouth disease virus} PDB: 1zbe_1
Probab=23.48 E-value=33 Score=24.36 Aligned_cols=29 Identities=14% Similarity=0.393 Sum_probs=19.5
Q ss_pred ceEEEEeeeeecCCCcccceEEEEEEcCCCCCchh
Q 045892 56 CRYAVYDFDFITHENCQKSKIFFIAWSPDPSKVRS 90 (130)
Q Consensus 56 p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~~ 90 (130)
.-|..+|++..-. .. .-++|+|.|||+..
T Consensus 69 FTY~rfDlEvtvv-----~~-~qvmyvPpGAP~p~ 97 (212)
T 1zba_1 69 ATYYFSDLEIVVR-----HD-GNLTWVPNGAPEAA 97 (212)
T ss_dssp EEEEEEEEEEEEE-----EE-SCEEEECTTCCGGG
T ss_pred ceEEeeeEEEEEE-----Ee-eEEEEECCCCCcch
Confidence 4577777765411 11 37999999999874
No 41
>1ev1_1 Echovirus 1; viral coat protein, capsid, picornavirus, icosahedral virus; HET: MYR PLM; 3.55A {Human echovirus 1} SCOP: b.121.4.1
Probab=22.59 E-value=33 Score=25.35 Aligned_cols=16 Identities=13% Similarity=0.200 Sum_probs=12.6
Q ss_pred EEEEEEcCCCCCchhh
Q 045892 76 IFFIAWSPDPSKVRSK 91 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~K 91 (130)
..-|+|+|.|||+-..
T Consensus 141 ~~qvmyvPpGaP~p~~ 156 (281)
T 1ev1_1 141 THQIMYVPPGGPIPVS 156 (281)
T ss_dssp EEEEEEECTTSCCCCS
T ss_pred EEEEEEcCCCCCCCcc
Confidence 3569999999997653
No 42
>1d4m_1 Protein (coxsackievirus A9); picornavirus structure, RGD, uncoating, virus-receptor interaction, WIN compound, virus/viral protein; HET: MYR W71; 2.90A {Human coxsackievirus A9} SCOP: b.121.4.1 PDB: 1h8t_A* 1upn_A 2c8i_A 1m11_1 2x5i_A* 3iyp_A*
Probab=22.13 E-value=34 Score=25.54 Aligned_cols=15 Identities=13% Similarity=0.257 Sum_probs=12.3
Q ss_pred EEEEEEcCCCCCchh
Q 045892 76 IFFIAWSPDPSKVRS 90 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~ 90 (130)
..-|+|+|.|||+-.
T Consensus 141 ~~qvmyvPpGAP~p~ 155 (299)
T 1d4m_1 141 THQIMYVPPGGPIPA 155 (299)
T ss_dssp EEEEEEECTTSCCCS
T ss_pred EEEEEECCCCCCCCC
Confidence 356999999999765
No 43
>1bev_1 Bovine enterovirus coat proteins VP1 to VP4; bovine enterovirus VG-5-27, picornavirus, icosahedral virus; HET: MYR; 3.00A {Bovine enterovirus} SCOP: b.121.4.1
Probab=21.56 E-value=36 Score=25.17 Aligned_cols=15 Identities=20% Similarity=0.399 Sum_probs=12.2
Q ss_pred EEEEEEcCCCCCchh
Q 045892 76 IFFIAWSPDPSKVRS 90 (130)
Q Consensus 76 ~vfI~w~P~~a~v~~ 90 (130)
.+-|+|+|.|||+-.
T Consensus 140 ~~qvmyvPpGaP~p~ 154 (281)
T 1bev_1 140 TYQVMYVPPGAPVPS 154 (281)
T ss_dssp EEEEEEECTTSCCCC
T ss_pred EEEEEEcCCCCCCCc
Confidence 456999999999764
No 44
>2wzr_1 Polyprotein; capsid, RNA replication, RNA-directed RNA polymerase, nucleotidyltransferase, HOST cytoplasmic vesicle, capsid protein; 3.00A {Foot-and-mouth disease virus}
Probab=21.53 E-value=28 Score=24.81 Aligned_cols=31 Identities=19% Similarity=0.484 Sum_probs=19.1
Q ss_pred CceEEEEeeeeecCCCcccceEEEEEEcCCCCCchh
Q 045892 55 ECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKVRS 90 (130)
Q Consensus 55 ~p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~~ 90 (130)
-.-|..+|++..--. .. .-|+|+|.|||+..
T Consensus 69 ~FTY~rfDlEvtiv~----~~-~qvmyvPpGaP~p~ 99 (219)
T 2wzr_1 69 AATYYFSDLEVACVG----TN-AWVGWTPNGSPVLT 99 (219)
T ss_dssp TEEEEEEEEEEEEES----SC-SCCEEECTTCCCCS
T ss_pred ecEEEeccEEEEEEe----cC-CEEEEECCCCCCCc
Confidence 345666666543110 01 26899999999876
No 45
>3cji_A Polyprotein; virus capsid protein structure, ATP-binding, cytoplasm, cytoplasmic vesicle, helicase, hydrolase, membrane, nucleotide-binding; 2.30A {Seneca valley virus}
Probab=20.81 E-value=72 Score=23.32 Aligned_cols=14 Identities=29% Similarity=0.740 Sum_probs=11.5
Q ss_pred EEEEEcCCCCCchh
Q 045892 77 FFIAWSPDPSKVRS 90 (130)
Q Consensus 77 vfI~w~P~~a~v~~ 90 (130)
+-|+|+|.|||+-.
T Consensus 136 ~qvmyvPpGaP~p~ 149 (263)
T 3cji_A 136 FAVGWFPSGSEYQA 149 (263)
T ss_dssp CEEEEECTTCCCCC
T ss_pred EEEEEeCCCCCCcc
Confidence 46999999999654
No 46
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=20.63 E-value=3.7e+02 Score=22.31 Aligned_cols=77 Identities=13% Similarity=0.213 Sum_probs=46.7
Q ss_pred CceEEEEEEeCcEEEEeecCCCCCChHHHhhcCCCCCceEEEEeeeeecCCCcccceEEEEEEcCCCCCchhhhhhhhhH
Q 045892 19 NYRFIIFKIDNQQVVVEKLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKVRSKMVYASSK 98 (130)
Q Consensus 19 ~~~~vi~~i~~~~i~v~~~~~~~~~~~el~~~L~~~~p~y~ly~~~~~~~~~~~~~k~vfI~w~P~~a~v~~KMlyas~k 98 (130)
+...-+.+|++...+.... +....+-+.+|--++|.+. ..| +...+..+|....|+..++..-|.-.
T Consensus 391 ~g~l~vWrIe~~~~~~vp~--------~~~G~Fy~gd~Yivl~ty~---~~g--~~~~~iyfW~G~~ss~de~g~aa~~~ 457 (729)
T 1d0n_A 391 TGQKQIWRVEGSNKVPVDP--------ATYGQFYGGDSYIILYNYR---HGS--RQGQIIYNWQGAQSTQDEVAASAILT 457 (729)
T ss_dssp CSCEEEEEEETTEEEECCG--------GGTTEEETTSEEEEEEEEE---ETT--EEEEEEEEEECTTSCHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCEEEECCh--------hhccEEcCCcEEEEEEEEe---cCC--CceEEEEEEeCCCCCHHHHHHHHHHH
Confidence 3455677777643333211 1122344456644445542 223 55778899999999999997766666
Q ss_pred HHHHhHcCCe
Q 045892 99 DRFKRELDGI 108 (130)
Q Consensus 99 ~~l~~~l~g~ 108 (130)
..|.+.++|-
T Consensus 458 veLd~~lgg~ 467 (729)
T 1d0n_A 458 AQLDEELGGT 467 (729)
T ss_dssp HHHHHTTTSC
T ss_pred HHHHHHcCCC
Confidence 6677778763
No 47
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=20.25 E-value=80 Score=19.91 Aligned_cols=32 Identities=19% Similarity=0.343 Sum_probs=19.7
Q ss_pred CCCceEEEEeeeeecCCCcc--cceEEEEEEcCCCC
Q 045892 53 ADECRYAVYDFDFITHENCQ--KSKIFFIAWSPDPS 86 (130)
Q Consensus 53 ~~~p~y~ly~~~~~~~~~~~--~~k~vfI~w~P~~a 86 (130)
+++..+.+.+..|+..||.- -.. .|.|+|++.
T Consensus 5 ~~~~ll~v~~v~yKK~dGtL~l~~d--~i~W~p~~~ 38 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQDGALYLMAE--RIAWAPEGK 38 (108)
T ss_dssp SCCEEEEESCCBCSSCBCEEEEETT--EEEEECSSS
T ss_pred chheeEEehhheeecCCceEEEEcc--eEEEccCCC
Confidence 34566667777777666521 112 678999655
Done!