Your job contains 1 sequence.
>045896
MMNLQQVMPPKSTANGFGRRRGEREGGTRLESKSQSGKSNSGRVTTTGSVIGSKSGSCAV
SSHDKLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQK
TVAEFVSKPPSKNFIIPSSELVQVIAKDVAVTRDGFANELQSDKQRELMIDSLISQTRHV
EERELEPWIPDEDVPQLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEELYTTKLLR
GPQTEELEKEAARIAREIAGEDTQDLHLAEERGSSIHENLGIDEETRFSSVYRGTGFDDS
GYEEDEDIVLNTHNNETFGDSSGSVDQISTDFAIAKSSDGAQLSSSSFIVDEAQTSQSDG
TGADLYCSEIPSRNFSTLDSESRVQENLLGECGGNNDAKDFVEKQPLPEDAQLPKSGDSQ
SSPNREKAGTIKVGRSANATPYSTSHVLSKGNEKTSSHGEPVDVAASCKAPGEPQSVNSR
GRPGSSASSNSDRAAAHQLLVVLDYLQARQWVLYLLKNQH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045896
(520 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088222 - symbol:CID4 "CTC-interacting domain ... 776 4.3e-77 1
TAIR|locus:2014330 - symbol:CID3 "CTC-interacting domain ... 705 1.4e-69 1
DICTYBASE|DDB_G0269682 - symbol:atxn2 "ataxin-2" species:... 290 4.2e-22 2
POMBASE|SPBC21B10.03c - symbol:SPBC21B10.03c "ataxin-2 ho... 204 3.0e-13 2
ASPGD|ASPL0000056792 - symbol:AN1325 species:162425 "Emer... 157 5.4e-12 2
CGD|CAL0005282 - symbol:orf19.5459 species:5476 "Candida ... 189 1.2e-11 1
UNIPROTKB|Q5A7K7 - symbol:PBP1 "Putative uncharacterized ... 189 1.2e-11 1
SGD|S000003410 - symbol:PBP1 "Component of glucose depriv... 178 3.3e-10 1
TAIR|locus:2160235 - symbol:AT5G54920 "AT5G54920" species... 158 3.1e-08 1
TAIR|locus:2116317 - symbol:AT4G26990 "AT4G26990" species... 149 2.6e-07 1
ZFIN|ZDB-GENE-030131-3246 - symbol:atxn2l "ataxin 2-like"... 137 3.2e-05 2
UNIPROTKB|F1RMZ0 - symbol:ATXN2 "Uncharacterized protein"... 132 7.4e-05 1
UNIPROTKB|H0YH87 - symbol:ATXN2 "Ataxin-2" species:9606 "... 129 0.00010 1
UNIPROTKB|Q99700 - symbol:ATXN2 "Ataxin-2" species:9606 "... 129 0.00016 1
UNIPROTKB|F1NJL0 - symbol:ATXN2 "Uncharacterized protein"... 128 0.00016 1
UNIPROTKB|E1BE88 - symbol:LOC616394 "Uncharacterized prot... 127 0.00026 1
UNIPROTKB|F8WB06 - symbol:ATXN2 "Ataxin-2" species:9606 "... 126 0.00026 1
UNIPROTKB|F8VQP2 - symbol:ATXN2 "Ataxin-2" species:9606 "... 126 0.00027 1
UNIPROTKB|Q29A33 - symbol:Atx2 "Ataxin-2 homolog" species... 123 0.00051 2
FB|FBgn0041188 - symbol:Atx2 "Ataxin-2" species:7227 "Dro... 121 0.00093 1
>TAIR|locus:2088222 [details] [associations]
symbol:CID4 "CTC-interacting domain 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009630
"gravitropism" evidence=RCA] EMBL:CP002686 InterPro:IPR009818
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145
Pfam:PF14438 eggNOG:COG5180 ProtClustDB:CLSN2682171 EMBL:AY045922
EMBL:AY079365 IPI:IPI00537524 RefSeq:NP_001078150.1
RefSeq:NP_001078151.1 RefSeq:NP_566471.1 UniGene:At.5643
ProteinModelPortal:Q94AM9 IntAct:Q94AM9 STRING:Q94AM9 PaxDb:Q94AM9
PRIDE:Q94AM9 EnsemblPlants:AT3G14010.1 EnsemblPlants:AT3G14010.2
EnsemblPlants:AT3G14010.3 GeneID:820615 KEGG:ath:AT3G14010
TAIR:At3g14010 InParanoid:Q94AM9 OMA:FDEEARY PhylomeDB:Q94AM9
ArrayExpress:Q94AM9 Genevestigator:Q94AM9 Uniprot:Q94AM9
Length = 595
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 177/435 (40%), Positives = 254/435 (58%)
Query: 43 RVTTTGSVIGSKSGSCAVSSHDKLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFG 102
+ T+ +V ++GS S D+L+Y +C IG VEV ++ GSVY GIFHA + EKDFG
Sbjct: 26 KTNTSNTVFNGEAGSLKRLSLDRLVYFTTCKIGHHVEVHLRNGSVYTGIFHAANVEKDFG 85
Query: 103 VILKMARLIKDGNFRGQKTVAEFVSKPPSKNFIIPSSELVQVIAKDVAVTRDGFANELQS 162
+ILKMA LIKDG RG K+ +EFV KPPSK FIIP+ ELVQVIAKD++V+ + +N +Q
Sbjct: 86 IILKMACLIKDGTLRGHKSRSEFVRKPPSKTFIIPADELVQVIAKDLSVSSNNMSNAVQG 145
Query: 163 DKQRELMIDSLISQTRHVE-ERELEPWIPDEDVPQLPELENIFDDPWNSKKWDQFETNET 221
+K EL+ DS ISQ+ HV+ ER+L+ W+PDE +P +LEN+FD+PWN +KW+QFE N++
Sbjct: 146 EKPSELLTDSSISQSYHVDRERQLQRWVPDETIPHGADLENVFDNPWN-RKWNQFEVNKS 204
Query: 222 LFGVKTTFNEELYTTKLLRGPQTXXXXXXXXXXXXXXXXXDTQDLHLAEERGSSIHENLG 281
LFGVK+TF+E+LYTT+L RGPQT T+D+H+AEERG ++EN
Sbjct: 205 LFGVKSTFDEDLYTTRLERGPQTKQLEEHAQKIAREIEAETTRDIHVAEERGLQLNENFD 264
Query: 282 IDEETRFSSVYRGTGFDDSGYEEDEDIVLNTHNNETFGDSSGSVDQISTDFAIAKSSDGA 341
DEE R+SSV TGF DSG++ +++ +L+T N+ TFG SS S Q A S G
Sbjct: 265 FDEEARYSSVRPVTGFGDSGFDLEDNALLDTCNDLTFGGSSTSDGQKP-----ASSGKGC 319
Query: 342 QLSSSSFIVDEAQTSQSDGTGADLYCSEIPSRNFSTLDSESRVQENLLGECGGNNDAKDF 401
+ S ++Q+S+ + D CS ++ + S + E+ L E N+ +
Sbjct: 320 EELRVS---GDSQSSRKN-KNVDQSCSTSKQQSKDFPAAGSNISESQLDEQRRKNNEE-- 373
Query: 402 VEKQPLPEDAQLPKSGDSQSSPNREKAGTIKVGRSANATPYSTSHVLSKGNEKTSSHGEP 461
V + GD + + G V ++ S V SK + SS G+
Sbjct: 374 VSHNNRSAEESTSGHGDIKEGA-KSGGGASSVSKAVTEREREASQVSSK-TKSESSFGQS 431
Query: 462 VDVAASCKAPGEPQS 476
++ + PG S
Sbjct: 432 ASRSSESR-PGPSTS 445
>TAIR|locus:2014330 [details] [associations]
symbol:CID3 "CTC-interacting domain 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
EMBL:CP002684 GenomeReviews:CT485782_GR InterPro:IPR009818
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145
Pfam:PF14438 eggNOG:COG5180 EMBL:AY136398 EMBL:BT000204
IPI:IPI00535135 RefSeq:NP_175819.1 UniGene:At.37271
ProteinModelPortal:Q8L793 SMR:Q8L793 IntAct:Q8L793 PaxDb:Q8L793
PRIDE:Q8L793 EnsemblPlants:AT1G54170.1 GeneID:841857
KEGG:ath:AT1G54170 TAIR:At1g54170 InParanoid:Q8L793 OMA:EIVGENT
PhylomeDB:Q8L793 ProtClustDB:CLSN2682171 ArrayExpress:Q8L793
Genevestigator:Q8L793 Uniprot:Q8L793
Length = 587
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 165/360 (45%), Positives = 223/360 (61%)
Query: 40 NSGRVTTTGSVIGSKSGSCAVSSHDKLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEK 99
N+ + + + G + S S L+Y +C IG VEV +K GSVY+GIFHA + EK
Sbjct: 26 NNAQPSVDNTENGWDAESVDTPSQKLLVYFTTCNIGHQVEVHLKNGSVYSGIFHAANVEK 85
Query: 100 DFGVILKMARLIKDGNFRGQKTVAEFVSKPPSKNFIIPSSELVQVIAKDVAVTRDGFANE 159
DFG+ILKMA LI+D RG K+ VSKP SK IP+ ELVQVIAKD+ ++ D ++
Sbjct: 86 DFGIILKMACLIRDS--RGTKS--RTVSKPSSKLLKIPADELVQVIAKDLPLSSDSVSDS 141
Query: 160 LQSDKQRELMIDSLISQTRHVE-ERELEPWIPDEDVPQLPELENIFDDPWNSKKWDQFET 218
+Q +K EL+ DSLISQ +V+ EREL+PW+PDEDVP +LEN+FDDPW + W+QFE
Sbjct: 142 VQCEKPLELLTDSLISQFYNVDLERELKPWVPDEDVPDCSDLENVFDDPWK-RGWNQFEV 200
Query: 219 NETLFGVKTTFNEELYTTKLLRGPQTXXXXXXXXXXXXXXXXXDTQDLHLAEERGSSIHE 278
N+TLFGV +TF+EELYTTKL RGP T +T+D+H+AEERG +
Sbjct: 201 NKTLFGVTSTFDEELYTTKLERGPGTRELEEQALRIAREIVGENTRDIHVAEERGLQLSG 260
Query: 279 NLGIDEETRFSSVYRGTGFDDSGYEEDE----DIVLNTHNNETFGDSSGS--VDQISTDF 332
IDEET++SSV FDD+ YE+DE DI+L+ NN TFGDSS S + ST
Sbjct: 261 KFDIDEETKYSSVCATNRFDDTCYEDDEEEEEDILLDCCNNLTFGDSSASDGKEPASTGK 320
Query: 333 AIAKS-SDGAQLSSSSFIVDEAQTSQSDGTGADLYCSEIPSRNFSTLDSESRVQENLLGE 391
S D L S+ +VD++ ++ + T + SE+PS++F + R E+ LGE
Sbjct: 321 FYEDSWGDSLHLRSNK-MVDQSWSNSNKHTRQLM--SELPSKDFPVAGNNIR-NESQLGE 376
>DICTYBASE|DDB_G0269682 [details] [associations]
symbol:atxn2 "ataxin-2" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] dictyBase:DDB_G0269682
EMBL:AAFI02000005 GenomeReviews:CM000150_GR InterPro:IPR009818
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145
Pfam:PF14438 RefSeq:XP_646184.1 EnsemblProtists:DDB0237977
GeneID:8617136 KEGG:ddi:DDB_G0269682 eggNOG:COG5180 OMA:PQGIVQP
Uniprot:Q55DE7
Length = 1103
Score = 290 (107.1 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 87/241 (36%), Positives = 120/241 (49%)
Query: 64 DKLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKD-----FGVILKMARLIKDGNFRG 118
++ ++++ L+G +V V +K G VY GI H TS +GV LKMAR KD N R
Sbjct: 83 ERTVFMSMSLVGQNVSVTLKNGDVYEGILHTTSTSTGSSGGGWGVALKMARK-KDTNNRV 141
Query: 119 QKTVAEFVSKPPSKNFIIPSSELVQVIAKDVAVT--RDGFANELQSDKQRELMIDSLISQ 176
T+ P II + + +Q+ A V + RD F N D+Q + L
Sbjct: 142 ITTL-------PLPLVIIEAKDFLQITATGVVLDHYRDSFMNR---DQQSFITDTELSGF 191
Query: 177 TRHVEERELEPWIPDEDVPQLPELENIFDDPWNSKK---WDQFETNETLFGVKTTFNEEL 233
+++EREL PW PD P + E + F +KK WDQFETNE LFGV+TT+ EE+
Sbjct: 192 DGNLKERELTPWTPD---PSVGESLDDFAANSEAKKPANWDQFETNEKLFGVRTTYEEEI 248
Query: 234 YTTKLLRGPQTXXXXXXXXXXXXXXXXXDTQ-DLHLAEERGSSIHENLGIDEETRFSSVY 292
YTT+L R + + ++HL EERG E DEE R+SSV
Sbjct: 249 YTTRLDRDSEFYKINQSVAEKKAQEIENEKSGNIHLLEERG--FVEGADYDEEERYSSVV 306
Query: 293 R 293
R
Sbjct: 307 R 307
Score = 42 (19.8 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 14/83 (16%), Positives = 34/83 (40%)
Query: 395 NNDAKDFVEKQPLPEDAQLPKSGDSQSSPNREKAGTIKVGRSANATPYSTSHVLSKGNEK 454
+ D K ++Q + Q + Q +++ + +A AT +++ + NE
Sbjct: 366 HQDKKQTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQPTTTATATASTSTSTTTTTNES 425
Query: 455 TSSHGEPVDVAASCKAPGEPQSV 477
SS +++ P P+++
Sbjct: 426 PSSSS----TSSTPSTPSTPKNI 444
>POMBASE|SPBC21B10.03c [details] [associations]
symbol:SPBC21B10.03c "ataxin-2 homolog (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0032153 "cell
division site" evidence=IDA] [GO:2000765 "regulation of cytoplasmic
translation" evidence=ISO] PomBase:SPBC21B10.03c GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:2000765 GO:GO:0032153
EMBL:CU329671 GO:GO:0006378 InterPro:IPR009604 Pfam:PF06741
eggNOG:COG5180 OrthoDB:EOG4643MM PIR:T39924 RefSeq:NP_595684.1
IntAct:Q9USW1 STRING:Q9USW1 EnsemblFungi:SPBC21B10.03c.1
GeneID:2540677 KEGG:spo:SPBC21B10.03c OMA:RINTEGP NextBio:20801801
Uniprot:Q9USW1
Length = 791
Score = 204 (76.9 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 50/159 (31%), Positives = 86/159 (54%)
Query: 138 SSELVQVIAKDVAVTRDGFANELQSDKQRELMIDSLISQTRHVE--ERELEPWIPDEDVP 195
SS + + + + V+ + + + +QR D IS + E +REL W+PD +
Sbjct: 71 SSNVTSLASSEENVSSVSGSAKSNNSQQRVWKTDVAISAEKRTETRQRELRRWMPDPEDA 130
Query: 196 QLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEELYTTKLLRG-PQTXXXXXXXXXX 254
+P L + ++ ++ +WDQF TNE LFGVK+ F+E+LYT+++ R P+
Sbjct: 131 GVP-LAGL-EESTDNVEWDQFATNEKLFGVKSHFDEDLYTSRIDRSHPKYKEKEQEADRI 188
Query: 255 XXXXXXXDTQDLHLAEERGSSIHENLGIDEETRFSSVYR 293
T ++H+AEERG + ++ G+DEE +S V+R
Sbjct: 189 AKEIEGTVTNNIHIAEERGLKVDDS-GLDEEDLYSGVHR 226
Score = 48 (22.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 414 PKSGDSQSSPNREKAGTIKVGRSANATPYST-SHVLSKGNEKTSS--HGEPVDVAASCKA 470
P GDS+ S N +++ G+ +N + S+ S N TSS + P A S
Sbjct: 707 PMYGDSRRS-NSQRSFNSSNGKRSNVHKNNNASNTFSHSNASTSSSLNAAPNTTAKSSSQ 765
Query: 471 PGEPQS 476
P S
Sbjct: 766 TAPPVS 771
Score = 39 (18.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 20/91 (21%), Positives = 36/91 (39%)
Query: 309 VLNTHNNETFGDSSGSVDQISTDFAIAKSSDGAQLSSSSFIVDEAQTSQSDGTGADLYCS 368
++N H +GDS S Q S + + K S+ + +++S + S S A +
Sbjct: 701 MMNMHY-PMYGDSRRSNSQRSFNSSNGKRSNVHKNNNASNTFSHSNASTSSSLNAAPNTT 759
Query: 369 EIPSRNFSTLDSESRVQENLLGECGGNNDAK 399
S + S+ E + N +AK
Sbjct: 760 AKSSSQTAPPVSKGDATEKTEKDASANQEAK 790
>ASPGD|ASPL0000056792 [details] [associations]
symbol:AN1325 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] EMBL:BN001308
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF14438
eggNOG:COG5180 EMBL:AACD01000018 RefSeq:XP_658929.1
ProteinModelPortal:Q5BDQ5 EnsemblFungi:CADANIAT00001288
GeneID:2877101 KEGG:ani:AN1325.2 HOGENOM:HOG000208317 OMA:FANNERI
OrthoDB:EOG47DDQN Uniprot:Q5BDQ5
Length = 1027
Score = 157 (60.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 42/124 (33%), Positives = 60/124 (48%)
Query: 171 DSLISQTRHVEERELEPWIPDEDVPQLPELENIFDDPWNSKKWDQFETNETLFGVKTTFN 230
D+ IS + ER L+ W P D LE+ K+WDQFETN LFG ++++
Sbjct: 193 DADISGNLAIRERALKRWEPGADASTDLSLESTSTA---LKQWDQFETNARLFGATSSYD 249
Query: 231 EELYTTKLLRG-PQTXXXXXXXXXXXXXXXXXDTQDLHLAEERGSSIHENLGIDEETRFS 289
E++YTT++ R P DT + H+ EERG + G DEE ++S
Sbjct: 250 EDMYTTRIDRSDPTYKRKEAEAARIAREIENSDTDNAHVREERGLQAPD-AG-DEEDKYS 307
Query: 290 SVYR 293
V R
Sbjct: 308 GVRR 311
Score = 89 (36.4 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 33/110 (30%), Positives = 49/110 (44%)
Query: 38 KSNSGRVTTTGSVIGSKSGSCAVS-SHDKLLYLASCLIGLSVEVQVKGGSVYAGIFHA-T 95
+ N T S +K + A + +HD+L++L + IGLS V K G + GI + T
Sbjct: 77 QQNGNMPQKTSSPTSTKESNTADNHAHDRLVFLFTTFIGLSTTVTTKNGDQFTGILSSST 136
Query: 96 SDEKDFGVILKMA-RLIKDGNFR--GQKTVA---EFVSKPPSKNFIIPSS 139
+ + V LKM R +K R G VA E S N + P +
Sbjct: 137 LEPNESSVTLKMTHRHLKQEQQRANGVSDVATTLEHSSHRLGPNLLTPGT 186
>CGD|CAL0005282 [details] [associations]
symbol:orf19.5459 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0006378 "mRNA polyadenylation" evidence=IEA] CGD:CAL0005282
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF14438
eggNOG:COG5180 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717736.1 RefSeq:XP_717830.1 STRING:Q5A7K7 GeneID:3640593
GeneID:3640671 KEGG:cal:CaO19.12914 KEGG:cal:CaO19.5459
Uniprot:Q5A7K7
Length = 525
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/128 (35%), Positives = 69/128 (53%)
Query: 167 ELMIDSLISQTRHVEERELEPWIPDEDVPQLPELENIFDDPWNSKKWDQFETNETLFGVK 226
E D+ IS ++ERELE W+PD++V EL + DD +WDQF+ N+ FGV+
Sbjct: 110 EFKTDADISGKMQIKERELERWVPDDEV----EL-TLEDD---GSEWDQFKVNQEKFGVE 161
Query: 227 TTFNEELYTTKL-LRGPQTXXXXXXXXXXXXXXXXXDTQDLHLAEERGSSIHENLGIDEE 285
++++E LYTT++ P T D H+ EERG + ++ G+DEE
Sbjct: 162 SSYDEHLYTTRIDTSAPDYHERVAKAERIAKEIEQQATTDRHILEERGVVVDDS-GVDEE 220
Query: 286 TRFSSVYR 293
++S V R
Sbjct: 221 DKYSGVDR 228
>UNIPROTKB|Q5A7K7 [details] [associations]
symbol:PBP1 "Putative uncharacterized protein PBP1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0005282 InterPro:IPR009604
InterPro:IPR025852 Pfam:PF06741 Pfam:PF14438 eggNOG:COG5180
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717736.1
RefSeq:XP_717830.1 STRING:Q5A7K7 GeneID:3640593 GeneID:3640671
KEGG:cal:CaO19.12914 KEGG:cal:CaO19.5459 Uniprot:Q5A7K7
Length = 525
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/128 (35%), Positives = 69/128 (53%)
Query: 167 ELMIDSLISQTRHVEERELEPWIPDEDVPQLPELENIFDDPWNSKKWDQFETNETLFGVK 226
E D+ IS ++ERELE W+PD++V EL + DD +WDQF+ N+ FGV+
Sbjct: 110 EFKTDADISGKMQIKERELERWVPDDEV----EL-TLEDD---GSEWDQFKVNQEKFGVE 161
Query: 227 TTFNEELYTTKL-LRGPQTXXXXXXXXXXXXXXXXXDTQDLHLAEERGSSIHENLGIDEE 285
++++E LYTT++ P T D H+ EERG + ++ G+DEE
Sbjct: 162 SSYDEHLYTTRIDTSAPDYHERVAKAERIAKEIEQQATTDRHILEERGVVVDDS-GVDEE 220
Query: 286 TRFSSVYR 293
++S V R
Sbjct: 221 DKYSGVDR 228
>SGD|S000003410 [details] [associations]
symbol:PBP1 "Component of glucose deprivation induced stress
granules" species:4932 "Saccharomyces cerevisiae" [GO:0045727
"positive regulation of translation" evidence=IMP;IPI] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006378 "mRNA
polyadenylation" evidence=IGI;IMP;IPI] [GO:0034063 "stress granule
assembly" evidence=IMP] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0005844 "polysome" evidence=IDA] SGD:S000003410
GO:GO:0005739 GO:GO:0005634 EMBL:BK006941 GO:GO:0006378
GO:GO:0005844 GO:GO:0045727 InterPro:IPR009604 InterPro:IPR025852
Pfam:PF06741 Pfam:PF14438 eggNOG:COG5180 GO:GO:0010494
GO:GO:0034063 EMBL:U46931 EMBL:Z72963 PIR:S64492 RefSeq:NP_011694.3
RefSeq:NP_011701.3 ProteinModelPortal:P53297 DIP:DIP-2464N
IntAct:P53297 MINT:MINT-488669 STRING:P53297 PaxDb:P53297
PeptideAtlas:P53297 EnsemblFungi:YGR178C GeneID:853089
GeneID:853097 KEGG:sce:YGR178C KEGG:sce:YGR185C CYGD:YGR178c
HOGENOM:HOG000093792 KO:K01866 OMA:IEKPYFT OrthoDB:EOG4643MM
NextBio:973070 Genevestigator:P53297 GermOnline:YGR178C
Uniprot:P53297
Length = 722
Score = 178 (67.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 161 QSDKQRELMIDSLISQT-RHVEERELEPWIPDEDVPQLP-ELENIFDDPWNSKKWDQFET 218
+S++ + D IS + R ++ER+LE W P+E +D +S WDQF
Sbjct: 164 ESNEVTKFRTDVDISGSGREIKERKLEKWTPEEGAEHFDINKGKALED--DSASWDQFAV 221
Query: 219 NETLFGVKTTFNEELYTTKLLRG-PQTXXXXXXXXXXXXXXXXXDTQ-DLHLAEERGSSI 276
NE FGVK+TF+E LYTTK+ + P T ++H+AE+RG I
Sbjct: 222 NEKKFGVKSTFDEHLYTTKINKDDPNYSKRLQEAERIAKEIESQGTSGNIHIAEDRGIII 281
Query: 277 HENLGIDEETRFSSVYR 293
++ G+DEE +S V R
Sbjct: 282 DDS-GLDEEDLYSGVDR 297
>TAIR|locus:2160235 [details] [associations]
symbol:AT5G54920 "AT5G54920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] EMBL:CP002688 InterPro:IPR025852
Pfam:PF14438 IPI:IPI00546406 RefSeq:NP_001119437.1 UniGene:At.28029
UniGene:At.7207 ProteinModelPortal:F4K1W7 EnsemblPlants:AT5G54920.2
GeneID:835583 KEGG:ath:AT5G54920 OMA:VETLVIL Uniprot:F4K1W7
Length = 522
Score = 158 (60.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 36/111 (32%), Positives = 63/111 (56%)
Query: 53 SKSGSCAVSSHDKLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIK 112
S S + S ++ LL C+IGL V V + GSV++GIF+ S E +F ++LK A+L K
Sbjct: 14 SSPSSSSSSLNEALLISTMCIIGLQVHVHINDGSVFSGIFYTVSLENEFSIVLKNAKLTK 73
Query: 113 DGNFRGQKTVAEFVSKPPSKNFIIPSSELVQVIAKDVAVTRDGFANELQSD 163
G + + V + +I SS +VQ++A+ V+++ + A E++ +
Sbjct: 74 KGRSKSNVESGKIV-----ETLVILSSNIVQIVAEGVSLSSN-VAGEIEGE 118
>TAIR|locus:2116317 [details] [associations]
symbol:AT4G26990 "AT4G26990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR025852 Pfam:PF14438
EMBL:AY075624 EMBL:AY149941 IPI:IPI00523544 RefSeq:NP_194429.3
UniGene:At.32128 ProteinModelPortal:Q8RY61 SMR:Q8RY61 IntAct:Q8RY61
EnsemblPlants:AT4G26990.1 GeneID:828807 KEGG:ath:AT4G26990
TAIR:At4g26990 eggNOG:NOG330883 InParanoid:Q8RY61 OMA:NIAYIPS
PhylomeDB:Q8RY61 ProtClustDB:CLSN2690018 Genevestigator:Q8RY61
Uniprot:Q8RY61
Length = 474
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 35/91 (38%), Positives = 52/91 (57%)
Query: 61 SSHDKLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQK 120
SS L+ C+IGL V V VK GSV++GIF S + FG++LK AR+ K G
Sbjct: 18 SSSSVLIAATMCIIGLQVHVHVKDGSVFSGIFFTASVDNGFGIVLKDARITKKGT----- 72
Query: 121 TVAEFVSKPPSKNFIIPSSELVQVIAKDVAV 151
+++ S +I SS +VQ+IA+ V++
Sbjct: 73 SISNVASGSVVDTLVILSSTIVQIIAEGVSL 103
>ZFIN|ZDB-GENE-030131-3246 [details] [associations]
symbol:atxn2l "ataxin 2-like" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] ZFIN:ZDB-GENE-030131-3246 InterPro:IPR009818
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145
Pfam:PF14438 GeneTree:ENSGT00530000063565 EMBL:BX784026
IPI:IPI00610550 Ensembl:ENSDART00000133168 ArrayExpress:F1QA42
Bgee:F1QA42 Uniprot:F1QA42
Length = 1004
Score = 137 (53.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 60/218 (27%), Positives = 99/218 (45%)
Query: 34 SQSGKSNSGRVTTTGSV-IGSKSGSC--AVSSHDKLLYLASCLIGLSVEVQVKGGSVYAG 90
S S + N GR SV S+S V ++ ++L+ + ++G +V VK GS+Y G
Sbjct: 31 SNSNRPNPGR--NRNSVKTPSQSPPVFEGVYNNSRMLHFLTAVVGSRCDVMVKNGSLYEG 88
Query: 91 IFHATSDEKDFGV--ILKMARLIKDGNFRGQKTVAEFVSKPPSKNFIIPSSELVQVIAKD 148
IF S + V + K+ DG G T + + I S+LV +I +D
Sbjct: 89 IFKTLSSRCELAVDAVHKVKNEEGDGG-GGGGTAVHPRKEEITDTMIFGPSDLVTMICRD 147
Query: 149 VAVTRDGFANELQSDKQRELMIDSLISQTR-HVEERE--LEPWIPDEDVPQLPELENIFD 205
V + +A R+ DS I +R + + RE L+ W + + +L+
Sbjct: 148 VDLN---YAT-------RDTFTDSAIGSSRLNGDHREKVLQRWDGGDSNGENFDLDADTA 197
Query: 206 DPWNSKKWDQFETNETLFGVKTTFNEEL--YTTKLLRG 241
+ W++ + F NE +GVK+T++ L YT L RG
Sbjct: 198 NGWDAS--EMFRFNEETYGVKSTYDSSLSMYTVPLERG 233
Score = 44 (20.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 419 SQSS-PNREKAGTIKVGRSANATPYSTSHVLSKGNEKTSSHGEPVD-VAASCKAPGE 473
SQSS P + + + G S+ +P++ SH LS + S PV+ V+ + G+
Sbjct: 380 SQSSTPTQSRPS--EPGHSSPPSPHTLSHSLSHP-QSLSDVARPVNGVSPKSQRTGQ 433
>UNIPROTKB|F1RMZ0 [details] [associations]
symbol:ATXN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0048872 "homeostasis of number of cells" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005154
"epidermal growth factor receptor binding" evidence=IEA]
[GO:0002091 "negative regulation of receptor internalization"
evidence=IEA] GO:GO:0005634 GO:GO:0005794 GO:GO:0048471
GO:GO:0048812 GO:GO:0050905 GO:GO:0005802 GO:GO:0040015
GO:GO:0005844 GO:GO:0021702 InterPro:IPR009818 InterPro:IPR009604
InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145 Pfam:PF14438
GeneTree:ENSGT00530000063565 OMA:NGGVPWP GO:GO:0010494
GO:GO:0033962 GO:GO:0048872 GO:GO:0002091 GO:GO:0034063
InterPro:IPR010920 SUPFAM:SSF50182 EMBL:CT737146
Ensembl:ENSSSCT00000010778 ArrayExpress:F1RMZ0 Uniprot:F1RMZ0
Length = 1301
Score = 132 (51.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 58/240 (24%), Positives = 103/240 (42%)
Query: 10 PKSTANXXXXXXXXXXXXXXLESKSQSG-KSNSGRVTTTGSVIGSKSGSC-AVSSHDKLL 67
P T++ + + S G + GR + + + S + ++ +++
Sbjct: 197 PSPTSSSVSSSSAAASSSSTVAAASAGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMV 256
Query: 68 YLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAEFVS 127
++ + ++G EVQVK G +Y G+F S + D ++L A + G K E +
Sbjct: 257 HILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCD--LVLDAAHEKSTESSSGPKR-EEIM- 312
Query: 128 KPPSKNFIIPSSELVQVIAKDVAVT---RDGFANELQSDKQRELMIDSLISQTRHVEERE 184
++ + S+ V V KD+ + RD F + S K ++ H +E++
Sbjct: 313 ----ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAK-----VNG-----EH-KEKD 357
Query: 185 LEPWIPDEDVP--QLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEEL--YTTKLLR 240
LEPW E +L LEN + W+ D F NE +GV +T++ L YT L R
Sbjct: 358 LEPWDAGELTTNEELEALENDVSNGWDPN--DMFRYNEENYGVVSTYDSSLSSYTVPLER 415
>UNIPROTKB|H0YH87 [details] [associations]
symbol:ATXN2 "Ataxin-2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005634
GO:GO:0005737 InterPro:IPR009818 InterPro:IPR009604
InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145 Pfam:PF14438
ChiTaRS:ATXN2 EMBL:AC002395 HGNC:HGNC:10555 InterPro:IPR010920
SUPFAM:SSF50182 EMBL:AC137055 PRIDE:H0YH87 Ensembl:ENST00000483311
Bgee:H0YH87 Uniprot:H0YH87
Length = 916
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 57/237 (24%), Positives = 102/237 (43%)
Query: 12 STANXXXXXXXXXXXXXXLESKSQSGKSNSGRVTTTGSVIGSKSGSC-AVSSHDKLLYLA 70
S ++ + + S G+ GR + + + S + ++ +++++
Sbjct: 134 SPSSSSVSSSSATAPSSVVAATSGGGRPGLGRGRNSNKGLPQSTISFDGIYANMRMVHIL 193
Query: 71 SCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAEFVSKPP 130
+ ++G EVQVK G +Y G+F S + D ++L A + G K E +
Sbjct: 194 TSVVGSKCEVQVKNGGIYEGVFKTYSPKCD--LVLDAAHEKSTESSSGPKR-EEIM---- 246
Query: 131 SKNFIIPSSELVQVIAKDVAVT---RDGFANELQSDKQRELMIDSLISQTRHVEERELEP 187
++ + S+ V V KD+ + RD F + S K ++ H +E++LEP
Sbjct: 247 -ESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAISAK-----VNG-----EH-KEKDLEP 294
Query: 188 WIPDEDVP--QLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEEL--YTTKLLR 240
W E +L LEN + W+ D F NE +GV +T++ L YT L R
Sbjct: 295 WDAGELTANEELEALENDVSNGWDPN--DMFRYNEENYGVVSTYDSSLSSYTVPLER 349
>UNIPROTKB|Q99700 [details] [associations]
symbol:ATXN2 "Ataxin-2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=IEA] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0048872 "homeostasis of number of cells" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0050658 "RNA transport" evidence=NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016070 "RNA metabolic process" evidence=NAS] [GO:0008022
"protein C-terminus binding" evidence=IPI] [GO:0005844 "polysome"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=NAS]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0034063 "stress
granule assembly" evidence=IMP] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0002091 "negative regulation
of receptor internalization" evidence=IMP] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006417 GO:GO:0008219
GO:GO:0048812 GO:GO:0003723 GO:GO:0050905 GO:GO:0005802
GO:GO:0040015 GO:GO:0005844 GO:GO:0016070 Orphanet:803
GO:GO:0021702 eggNOG:NOG268173 HOVERGEN:HBG050623
InterPro:IPR009818 InterPro:IPR009604 InterPro:IPR025852
Pfam:PF06741 Pfam:PF07145 Pfam:PF14438 HOGENOM:HOG000234354
ChiTaRS:ATXN2 EMBL:U70323 EMBL:AK128613 EMBL:AC002395 EMBL:Y08262
IPI:IPI00180154 IPI:IPI00443693 IPI:IPI00455359 IPI:IPI00455363
RefSeq:NP_002964.3 UniGene:Hs.76253 PDB:3KTR PDBsum:3KTR
ProteinModelPortal:Q99700 DIP:DIP-33372N IntAct:Q99700
MINT:MINT-1414788 STRING:Q99700 PhosphoSite:Q99700 DMDM:215273941
PaxDb:Q99700 PRIDE:Q99700 Ensembl:ENST00000377617
Ensembl:ENST00000482777 Ensembl:ENST00000550104 GeneID:6311
KEGG:hsa:6311 UCSC:uc001tsj.3 UCSC:uc001tsl.1 CTD:6311
GeneCards:GC12M111890 HGNC:HGNC:10555 HPA:HPA018295 HPA:HPA020339
HPA:HPA021146 MIM:183090 MIM:601517 neXtProt:NX_Q99700
Orphanet:98756 PharmGKB:PA34968 InParanoid:Q99700 OMA:NGGVPWP
OrthoDB:EOG4BP1B3 ChEMBL:CHEMBL1795085 EvolutionaryTrace:Q99700
GenomeRNAi:6311 NextBio:24501 ArrayExpress:Q99700 Bgee:Q99700
CleanEx:HS_ATXN2 Genevestigator:Q99700 GermOnline:ENSG00000204842
GO:GO:0010494 GO:GO:0033962 GO:GO:0048872 GO:GO:0002091
GO:GO:0050658 GO:GO:0034063 InterPro:IPR010920 SUPFAM:SSF50182
Uniprot:Q99700
Length = 1313
Score = 129 (50.5 bits), Expect = 0.00016, P = 0.00016
Identities = 57/237 (24%), Positives = 102/237 (43%)
Query: 12 STANXXXXXXXXXXXXXXLESKSQSGKSNSGRVTTTGSVIGSKSGSC-AVSSHDKLLYLA 70
S ++ + + S G+ GR + + + S + ++ +++++
Sbjct: 213 SPSSSSVSSSSATAPSSVVAATSGGGRPGLGRGRNSNKGLPQSTISFDGIYANMRMVHIL 272
Query: 71 SCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAEFVSKPP 130
+ ++G EVQVK G +Y G+F S + D ++L A + G K E +
Sbjct: 273 TSVVGSKCEVQVKNGGIYEGVFKTYSPKCD--LVLDAAHEKSTESSSGPKR-EEIM---- 325
Query: 131 SKNFIIPSSELVQVIAKDVAVT---RDGFANELQSDKQRELMIDSLISQTRHVEERELEP 187
++ + S+ V V KD+ + RD F + S K ++ H +E++LEP
Sbjct: 326 -ESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAISAK-----VNG-----EH-KEKDLEP 373
Query: 188 WIPDEDVP--QLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEEL--YTTKLLR 240
W E +L LEN + W+ D F NE +GV +T++ L YT L R
Sbjct: 374 WDAGELTANEELEALENDVSNGWDPN--DMFRYNEENYGVVSTYDSSLSSYTVPLER 428
>UNIPROTKB|F1NJL0 [details] [associations]
symbol:ATXN2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002091 "negative regulation of receptor
internalization" evidence=IEA] [GO:0005154 "epidermal growth factor
receptor binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IEA] [GO:0034063 "stress granule
assembly" evidence=IEA] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048812 "neuron
projection morphogenesis" evidence=IEA] [GO:0048872 "homeostasis of
number of cells" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] GO:GO:0005634 GO:GO:0005794 GO:GO:0048471
GO:GO:0005802 GO:GO:0040015 GO:GO:0005844 InterPro:IPR009818
InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145
Pfam:PF14438 GeneTree:ENSGT00530000063565 OMA:NGGVPWP GO:GO:0010494
GO:GO:0033962 GO:GO:0048872 GO:GO:0002091 GO:GO:0034063
EMBL:AADN02034920 IPI:IPI00583208 Ensembl:ENSGALT00000007367
Uniprot:F1NJL0
Length = 1070
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 65 KLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAE 124
+++++ + ++G EVQVK G +Y G+F S + D ++L A + G K E
Sbjct: 24 RMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCD--LVLDAAHRKTAESSLGPKR--E 79
Query: 125 FVSKPPSKNFIIPSSELVQVIAKDVAVTRDGFANELQSDKQRELMIDSLISQTRHVEERE 184
+ + + + SS+ V V KD+ D N + D + I + ++ H +E++
Sbjct: 80 DILE----SILFKSSDFVMVHFKDM----D--TNYARRDAFTDSAISAKVNG-EH-KEKD 127
Query: 185 LEPWIPDED--VPQLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEEL--YTTKLLR 240
LEPW E +L LE + W+ D F NE +GV +T++ L YT L R
Sbjct: 128 LEPWDGGETSATEELEALETDVSNGWDPN--DMFRYNEENYGVISTYDSSLSSYTVPLER 185
>UNIPROTKB|E1BE88 [details] [associations]
symbol:LOC616394 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0048872 "homeostasis of number of cells" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005154
"epidermal growth factor receptor binding" evidence=IEA]
[GO:0002091 "negative regulation of receptor internalization"
evidence=IEA] GO:GO:0005634 GO:GO:0005794 GO:GO:0048471
GO:GO:0048812 GO:GO:0050905 GO:GO:0005802 GO:GO:0040015
GO:GO:0005844 GO:GO:0021702 InterPro:IPR009818 InterPro:IPR009604
InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145 Pfam:PF14438
GeneTree:ENSGT00530000063565 CTD:6311 OMA:NGGVPWP GO:GO:0010494
GO:GO:0033962 GO:GO:0048872 GO:GO:0002091 GO:GO:0034063
InterPro:IPR010920 SUPFAM:SSF50182 EMBL:DAAA02045291
EMBL:DAAA02045292 IPI:IPI00705074 RefSeq:XP_002694546.1
RefSeq:XP_611789.3 PRIDE:E1BE88 Ensembl:ENSBTAT00000029620
GeneID:532649 KEGG:bta:532649 NextBio:20875760 Uniprot:E1BE88
Length = 1294
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 57/239 (23%), Positives = 102/239 (42%)
Query: 10 PKSTANXXXXXXXXXXXXXXLESKSQSGKSNSGRVTTTGSVIGSKSGSC-AVSSHDKLLY 68
P S ++ + + G+ GR + + + S + ++ ++++
Sbjct: 195 PSSVSSSSAAASSSSSSVAA--ASTGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVH 252
Query: 69 LASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAEFVSK 128
+ + ++G EVQVK G +Y G+F S + D ++L A + G K E +
Sbjct: 253 ILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCD--LVLDAAHEKSTESSSGPKR-EEIM-- 307
Query: 129 PPSKNFIIPSSELVQVIAKDVAVT---RDGFANELQSDKQRELMIDSLISQTRHVEEREL 185
++ + S+ V V KD+ + RD F + S K ++ H +E++L
Sbjct: 308 ---ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAK-----VNG-----EH-KEKDL 353
Query: 186 EPWIPDEDVP--QLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEEL--YTTKLLR 240
EPW E +L LEN + W+ D F NE +GV +T++ L YT L R
Sbjct: 354 EPWDAGELTTNDELEALENDVSNGWDPN--DMFRYNEENYGVVSTYDSSLSSYTVPLER 410
>UNIPROTKB|F8WB06 [details] [associations]
symbol:ATXN2 "Ataxin-2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005634
GO:GO:0005737 InterPro:IPR009818 InterPro:IPR009604
InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145 Pfam:PF14438
ChiTaRS:ATXN2 EMBL:AC002395 HGNC:HGNC:10555 InterPro:IPR010920
SUPFAM:SSF50182 EMBL:AC137055 IPI:IPI00719520
ProteinModelPortal:F8WB06 SMR:F8WB06 PRIDE:F8WB06
Ensembl:ENST00000389153 ArrayExpress:F8WB06 Bgee:F8WB06
Uniprot:F8WB06
Length = 1050
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 65 KLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAE 124
+++++ + ++G EVQVK G +Y G+F S + D ++L A + G K E
Sbjct: 2 RMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCD--LVLDAAHEKSTESSSGPKR-EE 58
Query: 125 FVSKPPSKNFIIPSSELVQVIAKDVAVT---RDGFANELQSDKQRELMIDSLISQTRHVE 181
+ ++ + S+ V V KD+ + RD F + S K ++ H +
Sbjct: 59 IM-----ESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAISAK-----VNG-----EH-K 102
Query: 182 ERELEPWIPDEDVP--QLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEEL--YTTK 237
E++LEPW E +L LEN + W+ D F NE +GV +T++ L YT
Sbjct: 103 EKDLEPWDAGELTANEELEALENDVSNGWDPN--DMFRYNEENYGVVSTYDSSLSSYTVP 160
Query: 238 LLR 240
L R
Sbjct: 161 LER 163
>UNIPROTKB|F8VQP2 [details] [associations]
symbol:ATXN2 "Ataxin-2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005634
GO:GO:0005737 InterPro:IPR009818 InterPro:IPR009604
InterPro:IPR025852 Pfam:PF06741 Pfam:PF07145 Pfam:PF14438
ChiTaRS:ATXN2 EMBL:AC002395 HGNC:HGNC:10555 InterPro:IPR010920
SUPFAM:SSF50182 EMBL:AC137055 IPI:IPI00719520
ProteinModelPortal:F8VQP2 PRIDE:F8VQP2 Ensembl:ENST00000542287
UCSC:uc001tsh.3 ArrayExpress:F8VQP2 Bgee:F8VQP2 Uniprot:F8VQP2
Length = 1073
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 65 KLLYLASCLIGLSVEVQVKGGSVYAGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAE 124
+++++ + ++G EVQVK G +Y G+F S + D ++L A + G K E
Sbjct: 2 RMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCD--LVLDAAHEKSTESSSGPKR-EE 58
Query: 125 FVSKPPSKNFIIPSSELVQVIAKDVAVT---RDGFANELQSDKQRELMIDSLISQTRHVE 181
+ ++ + S+ V V KD+ + RD F + S K ++ H +
Sbjct: 59 IM-----ESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAISAK-----VNG-----EH-K 102
Query: 182 ERELEPWIPDEDVP--QLPELENIFDDPWNSKKWDQFETNETLFGVKTTFNEEL--YTTK 237
E++LEPW E +L LEN + W+ D F NE +GV +T++ L YT
Sbjct: 103 EKDLEPWDAGELTANEELEALENDVSNGWDPN--DMFRYNEENYGVVSTYDSSLSSYTVP 160
Query: 238 LLR 240
L R
Sbjct: 161 LER 163
>UNIPROTKB|Q29A33 [details] [associations]
symbol:Atx2 "Ataxin-2 homolog" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0009994
"oocyte differentiation" evidence=ISS] [GO:0022416 "chaeta
development" evidence=ISS] [GO:0030833 "regulation of actin
filament polymerization" evidence=ISS] [GO:0048749 "compound eye
development" evidence=ISS] GO:GO:0005737 GO:GO:0022416
EMBL:CM000070 GO:GO:0030833 GO:GO:0048749 GenomeReviews:CM000070_GR
eggNOG:NOG268173 InterPro:IPR009604 InterPro:IPR025852 Pfam:PF06741
Pfam:PF14438 OrthoDB:EOG4F7M1J GO:GO:0009994 RefSeq:XP_001358379.2
ProteinModelPortal:Q29A33 GeneID:4801256 KEGG:dpo:Dpse_GA18704
FlyBase:FBgn0078704 InParanoid:Q29A33 Uniprot:Q29A33
Length = 1121
Score = 123 (48.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 41/157 (26%), Positives = 79/157 (50%)
Query: 32 SKSQSGKSNSGRVTTTGSVIGSKSGSCAVSSHDKLLYLASCLIGLSVEVQVKGGSVYAGI 91
+KS + +++G TG + + V ++ ++ A+ L+G VEV ++ G++Y G+
Sbjct: 39 NKSGAAGNSAGAGAGTGGT-AIRPVAQGVYNNTFFMHSATALVGSVVEVVLRSGNIYEGV 97
Query: 92 FHATSDEKDFGVILKMARLIKDGNFRGQKTVAEFVSKPPSKNFIIPSSELVQVIAKDVAV 151
F S +F + L++ IK N + K P K+ I P+ +V+++AKD
Sbjct: 98 FRTFSG--NFDIALELPACIKSKNLPEE-------GKVP-KHIIFPADTVVKIVAKDFD- 146
Query: 152 TRDGFANELQSDKQRELMIDSLISQTRHVEERELEPW 188
++ A ++D+ I + R ++E+ELEPW
Sbjct: 147 SQYATAGAFKTDEA----ISDKCNGAR-LDEKELEPW 178
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 223 FGVKTTFNEELYTTKLLRGPQ 243
F ++ T + + Y TK RGPQ
Sbjct: 319 FQLRETMSSDRYITKQTRGPQ 339
>FB|FBgn0041188 [details] [associations]
symbol:Atx2 "Ataxin-2" species:7227 "Drosophila melanogaster"
[GO:0022416 "chaeta development" evidence=IMP] [GO:0030833
"regulation of actin filament polymerization" evidence=IMP]
[GO:0048749 "compound eye development" evidence=IMP] [GO:0009994
"oocyte differentiation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0042051
"compound eye photoreceptor development" evidence=IMP] [GO:1901216
"positive regulation of neuron death" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] EMBL:AE014297 GO:GO:0005737
GO:GO:0006911 GO:GO:0022008 GO:GO:0022416 GO:GO:0030833
GO:GO:0048749 eggNOG:NOG268173 InterPro:IPR009604
InterPro:IPR025852 Pfam:PF06741 Pfam:PF14438
GeneTree:ENSGT00530000063565 EMBL:AY058253 EMBL:AY069494
EMBL:AY095516 EMBL:BT001272 EMBL:BT001340 RefSeq:NP_650466.2
RefSeq:NP_732033.1 RefSeq:NP_732034.2 UniGene:Dm.1489
ProteinModelPortal:Q8SWR8 SMR:Q8SWR8 STRING:Q8SWR8 PaxDb:Q8SWR8
PRIDE:Q8SWR8 EnsemblMetazoa:FBtr0083099 GeneID:41883
KEGG:dme:Dmel_CG5166 UCSC:CG5166-RA CTD:41883 FlyBase:FBgn0041188
InParanoid:Q8SWR8 OMA:FMHSATA OrthoDB:EOG4F7M1J PhylomeDB:Q8SWR8
ChiTaRS:ATXN2 GenomeRNAi:41883 NextBio:826090 Bgee:Q8SWR8
GO:GO:0009994 Uniprot:Q8SWR8
Length = 1084
Score = 121 (47.7 bits), Expect = 0.00093, P = 0.00093
Identities = 44/160 (27%), Positives = 75/160 (46%)
Query: 36 SGKSNSGRVTTTGSVIGSKSGSCAVS-------SHDKLLYLASCLIGLSVEVQVKGGSVY 88
+ NS R T + G +G AV ++ ++ A+ L+G VEV+++ G++Y
Sbjct: 24 NSNDNSLRPTNNKAGAGGGNGGAAVRPSAQGVYNNTFFMHSATALVGSVVEVRLRSGNIY 83
Query: 89 AGIFHATSDEKDFGVILKMARLIKDGNFRGQKTVAEFVSKPPSKNFIIPSSELVQVIAKD 148
G+F S +F + L++ IK N + K P K+ I P+ +V ++AKD
Sbjct: 84 EGVFRTFSG--NFDIALELPACIKSKNLPEE-------GKVP-KHIIFPADTVVTIVAKD 133
Query: 149 VAVTRDGFANELQSDKQRELMIDSLISQTRHVEERELEPW 188
++ A Q+D I + R +E+ELEPW
Sbjct: 134 FD-SQYATAGAFQTDGA----ISDKCNGARP-DEKELEPW 167
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.128 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 520 470 0.00098 118 3 11 23 0.37 35
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 607 (65 KB)
Total size of DFA: 266 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.45u 0.21s 42.66t Elapsed: 00:00:02
Total cpu time: 42.45u 0.21s 42.66t Elapsed: 00:00:02
Start: Tue May 21 04:27:19 2013 End: Tue May 21 04:27:21 2013