BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045897
(618 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 136/284 (47%), Gaps = 49/284 (17%)
Query: 307 FAYHELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCEN-ETDLIQVLSQVE 365
F+ EL+ A+ F + L G +Y G + DG+ VAV++++ E + +Q ++VE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 366 LLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIA 425
++S +HRNL RL G C+ ++VY Y ANG++ L + E + LDW KR IA
Sbjct: 88 MISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG------------------ 467
+A LA+L P I H D+K+ I LDE++ V FG
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 468 ----IPSTSLGVGSNSCNNQQAICVNKTDVYDFGVLLLELITG------CRQADQSTVTL 517
I L G +S KTDV+ +GV+LLELITG R A+ V L
Sbjct: 206 TIGHIAPEYLSTGKSS---------EKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 518 QK-----IRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRC 556
++ K++ +VD L Q ++ E++E++ +A C
Sbjct: 257 LDWVKGLLKEKKLEALVDVDL----QGNYKDEEVEQLIQVALLC 296
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 135/284 (47%), Gaps = 49/284 (17%)
Query: 307 FAYHELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCEN-ETDLIQVLSQVE 365
F+ EL+ A+ F + L G +Y G + DG VAV++++ E + +Q ++VE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 366 LLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIA 425
++S +HRNL RL G C+ ++VY Y ANG++ L + E + LDW KR IA
Sbjct: 80 MISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG------------------ 467
+A LA+L P I H D+K+ I LDE++ V FG
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 468 ----IPSTSLGVGSNSCNNQQAICVNKTDVYDFGVLLLELITG------CRQADQSTVTL 517
I L G +S KTDV+ +GV+LLELITG R A+ V L
Sbjct: 198 XIGHIAPEYLSTGKSS---------EKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 518 QK-----IRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRC 556
++ K++ +VD L Q ++ E++E++ +A C
Sbjct: 249 LDWVKGLLKEKKLEALVDVDL----QGNYKDEEVEQLIQVALLC 288
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 32/287 (11%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
+LEEAT F + G +Y GV+ DG+ VA+++ E+ + + +++E LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H +L L+G C + + I++Y+Y NG L+ HL S + W +RL I A
Sbjct: 93 RHPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------- 483
L +L + I H D+KS I LDE++ K+ FGI +G
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 484 -------QAICVNKTDVYDFGVLLLELITGCRQADQS---------TVTLQKIRSGKIQE 527
+ K+DVY FGV+L E++ QS ++ +G++++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 528 IVDPSLYYHEQPIFRREQMEKVADIATRCLLFGRDGKIGMIDIAKEL 574
IVDP+L +P E + K D A +CL + + M D+ +L
Sbjct: 268 IVDPNLADKIRP----ESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 32/287 (11%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
+LEEAT F + G +Y GV+ DG+ VA+++ E+ + + +++E LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H +L L+G C + + I++Y+Y NG L+ HL S + W +RL I A
Sbjct: 93 RHPHLVSLIGFCDERNEM--ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------- 483
L +L + I H D+KS I LDE++ K+ FGI +
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 484 -------QAICVNKTDVYDFGVLLLELITGCRQADQS---------TVTLQKIRSGKIQE 527
+ K+DVY FGV+L E++ QS ++ +G++++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 528 IVDPSLYYHEQPIFRREQMEKVADIATRCLLFGRDGKIGMIDIAKEL 574
IVDP+L +P E + K D A +CL + + M D+ +L
Sbjct: 268 IVDPNLADKIRP----ESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 42/240 (17%)
Query: 302 CRTRLFAYHELEEATRGFKDS------QKLADSKNGSIYAGVIGDGSHVAVQK----VQC 351
R F+++EL+ T F + K+ + G +Y G + + + VAV+K V
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDI 68
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E Q ++++++ H NL LLG D + +VY Y NG+L + L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRL----- 121
Query: 412 QKACLD------WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAG 465
+CLD W+ R IA A+ + FL H D+KS I LDE + K++
Sbjct: 122 --SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISD 176
Query: 466 FGIPSTSLG----------VGSNSCNNQQAI---CVNKTDVYDFGVLLLELITGCRQADQ 512
FG+ S VG+ + +A+ K+D+Y FGV+LLE+ITG D+
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 42/240 (17%)
Query: 302 CRTRLFAYHELEEATRGFKDS------QKLADSKNGSIYAGVIGDGSHVAVQK----VQC 351
R F+++EL+ T F + K+ + G +Y G + + + VAV+K V
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDI 68
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E Q ++++++ H NL LLG D + +VY Y NG+L + L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRL----- 121
Query: 412 QKACLD------WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAG 465
+CLD W+ R IA A+ + FL H D+KS I LDE + K++
Sbjct: 122 --SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISD 176
Query: 466 FGIPSTSLG----------VGSNSCNNQQAI---CVNKTDVYDFGVLLLELITGCRQADQ 512
FG+ S VG+ + +A+ K+D+Y FGV+LLE+ITG D+
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 42/240 (17%)
Query: 302 CRTRLFAYHELEEATRGFKDS------QKLADSKNGSIYAGVIGDGSHVAVQK----VQC 351
R F+++EL+ T F + K+ + G +Y G + + + VAV+K V
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDI 62
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E Q ++++++ H NL LLG D + +VY Y NG+L + L
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRL----- 115
Query: 412 QKACLD------WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAG 465
+CLD W+ R IA A+ + FL H D+KS I LDE + K++
Sbjct: 116 --SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISD 170
Query: 466 FGIPSTSLG----------VGSNSCNNQQAI---CVNKTDVYDFGVLLLELITGCRQADQ 512
FG+ S VG+ + +A+ K+D+Y FGV+LLE+ITG D+
Sbjct: 171 FGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 302 CRTRLFAYHELEEATRGFKDS------QKLADSKNGSIYAGVIGDGSHVAVQK----VQC 351
R F+++EL+ T F + K + G +Y G + + + VAV+K V
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT-VAVKKLAAMVDI 59
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E Q ++++ + H NL LLG D + +VY Y NG+L + L
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDL--CLVYVYXPNGSLLDRL----- 112
Query: 412 QKACLD------WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAG 465
+CLD W+ R IA A+ + FL H D+KS I LDE + K++
Sbjct: 113 --SCLDGTPPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISD 167
Query: 466 FGIPSTSLG----------VGSNSCNNQQAI---CVNKTDVYDFGVLLLELITGCRQADQ 512
FG+ S VG+ + +A+ K+D+Y FGV+LLE+ITG D+
Sbjct: 168 FGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
GS VAV K+ E + +V L +V ++ + H N+ +G ++ +V EY
Sbjct: 60 GSDVAV-KILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS--IVTEYL 116
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
+ G+L LL S + LD +RL +A + A + +L +PPI H DLKS + +D+
Sbjct: 117 SRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDK 174
Query: 458 DYCVKVAGFGIPS--------TSLGVGSNSCNNQQAI----CVNKTDVYDFGVLLLELIT 505
Y VKV FG+ + G+ + + K+DVY FGV+L EL T
Sbjct: 175 KYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
GS VAV K+ E + +V L +V ++ + H N+ +G ++ +V EY
Sbjct: 60 GSDVAV-KILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS--IVTEYL 116
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
+ G+L LL S + LD +RL +A + A + +L +PPI H +LKS + +D+
Sbjct: 117 SRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDK 174
Query: 458 DYCVKVAGFGIP--------STSLGVGSNSCNNQQAI----CVNKTDVYDFGVLLLELIT 505
Y VKV FG+ S+ G+ + + K+DVY FGV+L EL T
Sbjct: 175 KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 32/200 (16%)
Query: 331 GSIYAG-VIGDGSHVAVQKV---QCENETDLIQVLSQVE----LLSAIMHRNLARLLGCC 382
G ++ G ++ D S VA++ + E ET++I+ + + ++S + H N+ +L G
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ P +V E+ G L LL ++ + W +L + + A + ++Q + +PP
Sbjct: 93 HNP----PRMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPP 144
Query: 443 IFHHDLKSCYIF---LDED--YCVKVAGFGIPSTSLGVGSNSCNNQQAIC---------- 487
I H DL+S IF LDE+ C KVA FG+ S+ S N Q +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 488 -VNKTDVYDFGVLLLELITG 506
K D Y F ++L ++TG
Sbjct: 205 YTEKADTYSFAMILYTILTG 224
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 32/200 (16%)
Query: 331 GSIYAG-VIGDGSHVAVQKV---QCENETDLIQVLSQVE----LLSAIMHRNLARLLGCC 382
G ++ G ++ D S VA++ + E ET++I+ + + ++S + H N+ +L G
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ P +V E+ G L LL ++ + W +L + + A + ++Q + +PP
Sbjct: 93 HNP----PRMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPP 144
Query: 443 IFHHDLKSCYIF---LDED--YCVKVAGFGIPSTSLGVGSNSCNNQQAIC---------- 487
I H DL+S IF LDE+ C KVA FG S+ S N Q +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 488 -VNKTDVYDFGVLLLELITG 506
K D Y F ++L ++TG
Sbjct: 205 YTEKADTYSFAMILYTILTG 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG C
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 383 -IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
++ F +V EY G L ++L + + ++ L +A + +S + +L+
Sbjct: 98 TLEPPF---YIVTEYMPYGNLLDYLRECNREEVTA--VVLLYMATQISSAMEYLE---KK 149
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 210 IKSDVWAFGVLLWEIAT 226
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 32/200 (16%)
Query: 331 GSIYAG-VIGDGSHVAVQKV---QCENETDLIQVLSQVE----LLSAIMHRNLARLLGCC 382
G ++ G ++ D S VA++ + E ET++I+ + + ++S + H N+ +L G
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM 92
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ P +V E+ G L LL ++ + W +L + + A + ++Q + +PP
Sbjct: 93 HNP----PRMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPP 144
Query: 443 IFHHDLKSCYIF---LDED--YCVKVAGFGIPSTSLGVGSNSCNNQQAIC---------- 487
I H DL+S IF LDE+ C KVA F + S+ S N Q +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 488 -VNKTDVYDFGVLLLELITG 506
K D Y F ++L ++TG
Sbjct: 205 YTEKADTYSFAMILYTILTG 224
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 45/225 (20%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS-GFINPI------- 391
D + A++K++ E L +LS+V LL+++ H+ + R ++ F+ P+
Sbjct: 30 DSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 392 ---VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDL 448
+ EY NGTL + L+ S D Y RL +L L + S I H DL
Sbjct: 89 TLFIQMEYCENGTLYD-LIHSENLNQQRDEYWRLF-----RQILEALSYIHSQGIIHRDL 142
Query: 449 KSCYIFLDEDYCVKVAGFGIPST-----------SLGVGSNSCNNQQAICV--------- 488
K IF+DE VK+ FG+ S + +S N AI
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 489 -------NKTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQ 526
K D+Y G++ E+I + L+K+RS I+
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIE 247
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 78 CTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KK 130
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 76 CTREPPF--YIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KK 128
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 84 TREPPF--YIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KKN 136
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN---- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 78 CTREPPF--YIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KK 130
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 77 TREPPF--YIIIEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KKN 129
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN---- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 78 CTREPPF--YIIIEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KK 130
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 79 CTREPPF--YIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 131
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 79 TREPPF--YIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KKN 131
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN---- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 83 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 135
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 82 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 134
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 195 IKSDVWAFGVLLWEIAT 211
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 76 CTREPPF--YIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KK 128
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 83 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 135
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 83 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 135
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 79 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 131
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 80 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 132
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 83 CTREPPF--YIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 135
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 91 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 143
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 204 IKSDVWAFGVLLWEIAT 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 78 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 130
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 80 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 132
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 80 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 132
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 193 IKSDVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
C ++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 78 CTREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KK 130
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN--- 489
H DL + + E++ VKVA FG+ G G+ +++ N
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 490 -KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 20/196 (10%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
++ E+ G L ++L + + Q+ L +A + +S + +L+
Sbjct: 286 TREPPF--YIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLE---KKN 338
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN---- 489
H +L + + E++ VKVA FG+ G G+ +++ N
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 399 KSDVWAFGVLLWEIAT 414
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 106 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 159
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG C
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 325 TREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KKN 377
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN---- 489
H +L + + E++ VKVA FG+ G G+ +++ N
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 438 KSDVWAFGVLLWEIAT 453
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 104 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 157
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 130 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 183
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 152
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 102 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 155
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
KL + G +Y GV S K E+ ++ + L + ++ I H NL +LLG C
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
++ E+ G L ++L + + Q+ ++ L +A + +S + +L+
Sbjct: 283 TREPPF--YIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLE---KKN 335
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG------VGSN---SCNNQQAICVN---- 489
H +L + + E++ VKVA FG+ G G+ +++ N
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL E+ T
Sbjct: 396 KSDVWAFGVLLWEIAT 411
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 105 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 158
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ E+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L E+L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 102 SLREYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 155
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 152
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 152
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 170
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 97 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 150
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVIGDGS----HVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + D H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + V ++F S H
Sbjct: 105 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD------LIGFGLQVAKGMKFLASKKFVH 157
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ L +S +N Q
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 218 KSDVWSFGVLLWELMT 233
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 103 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 156
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 170
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 98 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 151
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 45/225 (20%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS-GFINPI------- 391
D + A++K++ E L +LS+V LL+++ H+ + R ++ F+ P+
Sbjct: 30 DSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 392 ---VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDL 448
+ EY N TL + L+ S D Y RL +L L + S I H DL
Sbjct: 89 TLFIQMEYCENRTLYD-LIHSENLNQQRDEYWRLF-----RQILEALSYIHSQGIIHRDL 142
Query: 449 KSCYIFLDEDYCVKVAGFGIPST-----------SLGVGSNSCNNQQAICV--------- 488
K IF+DE VK+ FG+ S + +S N AI
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 489 -------NKTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQ 526
K D+Y G++ E+I + L+K+RS I+
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIE 247
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 34/276 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLI-IAAETASVLAFLQFEISP 441
+V ++ +L HL +SE K + K+LI IA +TA + +L +
Sbjct: 78 TKPQLA---IVTQWCEGSSLYHHL-HASETKFEM---KKLIDIARQTARGMDYLH---AK 127
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN-- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 490 -----KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRRE 544
++DVY FG++L EL+TG Q S + +I E+V + R
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTG--QLPYSNIN----NRDQIIEMVGRGSLSPDLSKVRSN 241
Query: 545 QMEKVADIATRCLLFGRDGKIGMIDIAKELVHIAKE 580
+++ + CL RD + I E+ +A+E
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 277
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 34/276 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLI-IAAETASVLAFLQFEISP 441
+V ++ +L HL +SE K + K+LI IA +TA + +L +
Sbjct: 90 TKPQLA---IVTQWCEGSSLYHHL-HASETKFEM---KKLIDIARQTARGMDYLH---AK 139
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPS-TSLGVGSNSCNN---------QQAICVN-- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 490 -----KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRRE 544
++DVY FG++L EL+TG Q S + +I E+V + R
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTG--QLPYSNIN----NRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 545 QMEKVADIATRCLLFGRDGKIGMIDIAKELVHIAKE 580
+++ + CL RD + I E+ +A+E
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 66
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 67 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 120
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFP 174
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 66 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 119
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS-------TSLGVGSNSCNN 482
+AF++ H DL++ I + + K+A FG+ T+
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 483 QQAICVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 67
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 68 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 121
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFP 175
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 176 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 66 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 119
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFP 173
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 66 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 119
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFP 173
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 73
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 74 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 127
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFP 181
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 182 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 74
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 75 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 128
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFP 182
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 183 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 70
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 71 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 124
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS-------TSLGVGSNSCNN 482
+AF++ H DL++ I + + K+A FG+ T+
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 483 QQAICVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 75
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 76 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 129
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS-------TSLGVGSNSCNN 482
+AF++ H DL++ I + + K+A FG+ T+
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 483 QQAICVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 72 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 125
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS-------TSLGVGSNSCNN 482
+AF++ H DL++ I + + K+A FG+ T+
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 483 QQAICVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 72 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 125
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEXTAREGAKFP 179
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 60
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 61 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 114
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H DL++ I + + K+A FG+ + N ++
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFP 168
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 169 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L K E+ +D K L ++ + +L + H +L + I ++ +
Sbjct: 100 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRNLATRNILVENENR 153
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 26/186 (13%)
Query: 339 GDGSHVAVQKVQCENETDLIQVLSQ-VELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G G VAV+ ++ + Q +++L + H ++ + GCC D+G + +V EY
Sbjct: 58 GTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
G+L ++L + S A L L+ A + +A+L + H DL + + LD
Sbjct: 118 PLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDN 169
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQ----------AICVNK------TDVYDFGVLLL 501
D VK+ FG+ + ++ G ++ C+ + +DV+ FGV L
Sbjct: 170 DRLVKIGDFGL-AKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 502 ELITGC 507
EL+T C
Sbjct: 229 ELLTHC 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 34/276 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLI-IAAETASVLAFLQFEISP 441
+V ++ +L HL +SE K + K+LI IA +TA + +L +
Sbjct: 90 TAPQLA---IVTQWCEGSSLYHHL-HASETKFEM---KKLIDIARQTARGMDYLH---AK 139
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPS-TSLGVGSNSCNN---------QQAICVN-- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 490 -----KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRRE 544
++DVY FG++L EL+TG Q S + +I E+V + R
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTG--QLPYSNIN----NRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 545 QMEKVADIATRCLLFGRDGKIGMIDIAKELVHIAKE 580
+++ + CL RD + I E+ +A+E
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+Q E L ++E+L ++ H N+ + G C +G N ++ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 401 TLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYC 460
+L ++L +E+ +D K L ++ + +L + H DL + I ++ +
Sbjct: 102 SLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENR 155
Query: 461 VKVAGFGIPST-----------SLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
VK+ FG+ G +++ +K +DV+ FGV+L EL T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 163 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF------VH 215
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ +S +N Q
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 276 KSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 104 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF------VH 156
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ +S +N Q
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + V ++F S H
Sbjct: 105 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD------LIGFGLQVAKGMKFLASKKFVH 157
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ +S +N Q
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 218 KSDVWSFGVLLWELMT 233
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 319 FKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARL 378
K ++L + G ++ G + VAV+ ++ + L++ L+ + H+ L RL
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 379 LGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQF 437
PI ++ EY NG+L + L S K ++ K L +AA+ A +AF++
Sbjct: 74 YAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIE- 126
Query: 438 EISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS-------TSLGVGSNSCNNQQAICVN- 489
H DL++ I + + K+A FG+ T+ +N
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINY 184
Query: 490 -----KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL E++T R
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVIGDGS----HVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + D H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + V ++F S H
Sbjct: 102 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD------LIGFGLQVAKGMKFLASKKFVH 154
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ +S +N Q
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 215 KSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVIGDGS----HVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + D H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + V ++F S H
Sbjct: 104 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD------LIGFGLQVAKGMKFLASKKFVH 156
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ +S +N Q
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 103 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 155
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 216 KSDVWSFGVLLWELMT 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 49 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 109 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF------VH 161
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ +S +N Q
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 221
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 222 KSDVWSFGVLLWELMT 237
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 62 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 122 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 174
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 234
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 235 KSDVWSFGVLLWELMT 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 36 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 96 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 148
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 208
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 209 KSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 104 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 156
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 102 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 154
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 215 KSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 99 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 151
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 211
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 212 KSDVWSFGVLLWELMT 227
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 101 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 153
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 213
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 214 KSDVWSFGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 104 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 156
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 217 KSDVWSFGVLLWELMT 232
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAI 370
E E K ++L + G ++ G + VAV+ ++ + L++ L+ +
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 61
Query: 371 MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETA 429
H+ L RL PI ++ EY NG+L + L S K ++ K L +AA+ A
Sbjct: 62 QHQRLVRLYAVVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 115
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI--- 486
+AF++ H +L++ I + + K+A FG+ + N ++
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARL---IEDNEYTAREGAKFP 169
Query: 487 -------CVN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL E++T R
Sbjct: 170 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 103 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 155
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 216 KSDVWSFGVLLWELMT 231
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 331 GSIYAGVI----GDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS 385
G +Y G + G H AV+ + + + ++ Q L++ ++ H N+ LLG C+ S
Sbjct: 63 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 386 GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFH 445
+P+VV Y +G L + + D + A+ LA +F H
Sbjct: 123 EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF------VH 175
Query: 446 HDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN----------------QQAICVN 489
DL + LDE + VKVA FG+ S +N Q
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 235
Query: 490 KTDVYDFGVLLLELIT 505
K+DV+ FGVLL EL+T
Sbjct: 236 KSDVWSFGVLLWELMT 251
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 107
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 108 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 163
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 224 VWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 118
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 119 GNLREYL--QAREPPGLEYSYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 174
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 110
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 111 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 166
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 227 VWSFGVLLWEIFT 239
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 159
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 160 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 215
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 216 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 276 VWSFGVLLWEIFT 288
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 118
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 119 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 174
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 103
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 104 GNLREYL--QARRPPGLEYCYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 159
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 220 VWSFGVLLWEIFT 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 111
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 112 GNLREYL--QARRPPGLEYSYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 167
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 228 VWSFGVLLWEIFT 240
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 39/195 (20%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 118
Query: 400 GTLEEHLL---------------KSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIF 444
G L E+L EQ + D + + V +++ S
Sbjct: 119 GNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD------LVSCAYQVARGMEYLASKKCI 172
Query: 445 HHDLKSCYIFLDEDYCVKVAGFGIPST--SLGVGSNSCNNQ------------QAICVNK 490
H DL + + + ED +K+A FG+ + + N + I ++
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 491 TDVYDFGVLLLELIT 505
+DV+ FGVLL E+ T
Sbjct: 233 SDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 342 SHVAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPAN 399
+ VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY +
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASK 118
Query: 400 GTLEEHLLKSSEQKACLDW-------------YKRLIIAAETASVLAFLQFEISPPIFHH 446
G L E+L + + L++ K L+ A V +++ S H
Sbjct: 119 GNLREYL--QARRPPGLEYCYNPSHNPEEQLSSKDLVSCA--YQVARGMEYLASKKCIHR 174
Query: 447 DLKSCYIFLDEDYCVKVAGFGI----------PSTSLGVGSNSCNNQQA----ICVNKTD 492
DL + + + ED +K+A FG+ T+ G +A I +++D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 493 VYDFGVLLLELIT 505
V+ FGVLL E+ T
Sbjct: 235 VWSFGVLLWEIFT 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 45/225 (20%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDS-GFINP-------- 390
D + A++K++ E L +LS+V LL+++ H+ + R ++ F+ P
Sbjct: 30 DSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKS 88
Query: 391 --IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDL 448
+ EY N TL + L+ S D Y RL +L L + S I H +L
Sbjct: 89 TLFIQXEYCENRTLYD-LIHSENLNQQRDEYWRLF-----RQILEALSYIHSQGIIHRNL 142
Query: 449 KSCYIFLDEDYCVKVAGFGIPST-----------SLGVGSNSCNNQQAICV--------- 488
K IF+DE VK+ FG+ S + +S N AI
Sbjct: 143 KPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVL 202
Query: 489 -------NKTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQ 526
K D Y G++ E I + L+K+RS I+
Sbjct: 203 DGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIE 247
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 25/162 (15%)
Query: 362 SQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKR 421
++++L + H ++ + GCC D G + +V EY G+L ++L + S A L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL----- 119
Query: 422 LIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCN 481
L+ A + +A+L S H +L + + LD D VK+ FG+ + ++ G
Sbjct: 120 LLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYR 175
Query: 482 NQQ----------AICVNK------TDVYDFGVLLLELITGC 507
++ C+ + +DV+ FGV L EL+T C
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 217
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 363 QVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRL 422
++E+L + H ++ + GCC D G + +V EY G+L ++L + C+ + L
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLL 115
Query: 423 IIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN 482
+ A + +A+L + H L + + LD D VK+ FG+ + ++ G
Sbjct: 116 LFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYRV 171
Query: 483 QQ----------AICVNK------TDVYDFGVLLLELITGCRQADQSTVT 516
++ C+ + +DV+ FGV L EL+T C ++QS T
Sbjct: 172 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYC-DSNQSPHT 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 36/228 (15%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G ++ G + + VAV+ ++ + L + L+ + H L RL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY A G+L + L K L K + +A+ A +A+++
Sbjct: 78 TRE---EPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RK 129
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI----------CVN-- 489
H DL++ + + E K+A FG+ + N ++ +N
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFG 186
Query: 490 ----KTDVYDFGVLLLELIT-------GCRQADQSTVTLQKIRSGKIQ 526
K+DV+ FG+LL E++T G AD T Q R +++
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVE 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 102 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 152
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 363 QVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRL 422
++E+L + H ++ + GCC D G + +V EY G+L ++L + C+ + L
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLL 114
Query: 423 IIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN 482
+ A + +A+L + H L + + LD D VK+ FG+ + ++ G
Sbjct: 115 LFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYRV 170
Query: 483 QQ----------AICVNK------TDVYDFGVLLLELITGCRQADQSTVT 516
++ C+ + +DV+ FGV L EL+T C ++QS T
Sbjct: 171 REDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYC-DSNQSPHT 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 341 GSHVAVQKVQCENETDLIQVLS-QVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPAN 399
G VAV+ ++ E+ + I L ++E+L + H N+ + G C + G ++ E+ +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 400 GTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDY 459
G+L+E+L K+ K ++ ++L A + + +L S H DL + + ++ ++
Sbjct: 110 GSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEH 163
Query: 460 CVKVAGFGIPS----------------TSLGVGSNSCNNQQAICVNKTDVYDFGVLLLEL 503
VK+ FG+ + + + C Q + +DV+ FGV L EL
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI-ASDVWSFGVTLHEL 222
Query: 504 ITGCRQADQSTVTL 517
+T C +D S + L
Sbjct: 223 LTYC-DSDSSPMAL 235
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 101 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 151
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 212 PYSFQSDVYAFGIVLYELMTG 232
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 341 GSHVAVQKVQCENETDLIQVLS-QVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPAN 399
G VAV+ ++ E+ + I L ++E+L + H N+ + G C + G ++ E+ +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 400 GTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDY 459
G+L+E+L K+ K ++ ++L A + + +L S H DL + + ++ ++
Sbjct: 98 GSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEH 151
Query: 460 CVKVAGFGIPS----------------TSLGVGSNSCNNQQAICVNKTDVYDFGVLLLEL 503
VK+ FG+ + + + C Q + +DV+ FGV L EL
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYI-ASDVWSFGVTLHEL 210
Query: 504 ITGCRQADQSTVTL 517
+T C +D S + L
Sbjct: 211 LTYC-DSDSSPMAL 223
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 102 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 152
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPS-TSLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ N+ N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 94 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 144
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPS-TSLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 205 PYSFQSDVYAFGIVLYELMTG 225
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 37/223 (16%)
Query: 337 VIGDGSHVAVQKVQCENETDLI----------------QVLSQVELLSAIMHRNLARLLG 380
IG GS+ QK++ +++ ++ ++S+V LL + H N+ R
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 381 CCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
ID +V EY G L + K ++++ LD + ++ T LA +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD--EEFVLRVMTQLTLALKECHRR 130
Query: 441 P----PIFHHDLKSCYIFLDEDYCVKVAGFGIPS-----TSLG---VGS---NSCNNQQA 485
+ H DLK +FLD VK+ FG+ TS VG+ S
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNR 190
Query: 486 ICVN-KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQE 527
+ N K+D++ G LL EL C T QK +GKI+E
Sbjct: 191 MSYNEKSDIWSLGCLLYEL---CALMPPFTAFSQKELAGKIRE 230
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 76 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 126
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 187 PYSFQSDVYAFGIVLYELMTG 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 37/223 (16%)
Query: 337 VIGDGSHVAVQKVQCENETDLI----------------QVLSQVELLSAIMHRNLARLLG 380
IG GS+ QK++ +++ ++ ++S+V LL + H N+ R
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 381 CCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
ID +V EY G L + K ++++ LD + ++ T LA +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD--EEFVLRVMTQLTLALKECHRR 130
Query: 441 P----PIFHHDLKSCYIFLDEDYCVKVAGFGIPS-----TSLG---VGS---NSCNNQQA 485
+ H DLK +FLD VK+ FG+ TS VG+ S
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNR 190
Query: 486 ICVN-KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQE 527
+ N K+D++ G LL EL C T QK +GKI+E
Sbjct: 191 MSYNEKSDIWSLGCLLYEL---CALMPPFTAFSQKELAGKIRE 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 79 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 190 PYSFQSDVYAFGIVLYELMTG 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 79 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 190 PYSFQSDVYAFGIVLYELMTG 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 74 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 26/202 (12%)
Query: 322 SQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
S ++ G++Y G V + KV ++V +L H N+ +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 382 CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
N +V ++ +L +HL Q+ ++ + IA +TA + +L +
Sbjct: 101 MTKD---NLAIVTQWCEGSSLYKHL---HVQETKFQMFQLIDIARQTAQGMDYLH---AK 151
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNNQQAICVN----------- 489
I H D+KS IFL E VK+ FG+ + S GS +
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 490 -----KTDVYDFGVLLLELITG 506
++DVY +G++L EL+TG
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTG 233
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 25/162 (15%)
Query: 362 SQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKR 421
++++L + H ++ + GCC D G + +V EY G+L ++L + S A L
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL----- 119
Query: 422 LIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCN 481
L+ A + +A+L + H +L + + LD D VK+ FG+ + ++ G
Sbjct: 120 LLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYR 175
Query: 482 NQQ----------AICVNK------TDVYDFGVLLLELITGC 507
++ C+ + +DV+ FGV L EL+T C
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 74 TKPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPS-TSLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
Q++ G++Y G V + V L ++V +L H N+ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+V ++ +L HL E K + K + IA +TA + +L +
Sbjct: 74 TAPQLA---IVTQWCEGSSLYHHL-HIIETK--FEMIKLIDIARQTAQGMDYLH---AKS 124
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSCNN---------QQAICVN--- 489
I H DLKS IFL ED VK+ FG+ + S GS+ + I +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 490 ----KTDVYDFGVLLLELITG 506
++DVY FG++L EL+TG
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 34/200 (17%)
Query: 331 GSIY-AGVIGDGSHVAVQKVQCENETDLIQVLSQV----ELLSAIMHRNLARLLGCCIDS 385
G +Y A IGD VAV+ + + + D+ Q + V +L + + H N+ L G C+
Sbjct: 21 GKVYRAFWIGD--EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE 78
Query: 386 GFINPIVVYEYPANGTLEEHLL-KSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIF 444
N +V E+ G L L K ++W A + A + +L E PI
Sbjct: 79 P--NLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVPII 130
Query: 445 HHDLKSCYIFLDE--------DYCVKVAGFGIP-----STSL-GVGSNSCNNQQAICVNK 490
H DLKS I + + + +K+ FG+ +T + G+ + + I +
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM 190
Query: 491 ----TDVYDFGVLLLELITG 506
+DV+ +GVLL EL+TG
Sbjct: 191 FSKGSDVWSYGVLLWELLTG 210
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 29/188 (15%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE----------TASVLAFLQFEISPPIFHHDLKSC 451
L E+ L++ Y + E T + +++ S H DL +
Sbjct: 128 LREY-LRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR 186
Query: 452 YIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDFG 497
+ + E+ +K+A FG+ ++ + N + + +++DV+ FG
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
Query: 498 VLLLELIT 505
VL+ E+ T
Sbjct: 247 VLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPL--YVIVEYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 37/223 (16%)
Query: 337 VIGDGSHVAVQKVQCENETDLI----------------QVLSQVELLSAIMHRNLARLLG 380
IG GS+ QK++ +++ ++ ++S+V LL + H N+ R
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 381 CCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQ---- 436
ID +V EY G L + K ++++ LD + ++ T LA +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD--EEFVLRVMTQLTLALKECHRR 130
Query: 437 FEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS--------TSLGVGSN---SCNNQQA 485
+ + H DLK +FLD VK+ FG+ VG+ S
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNR 190
Query: 486 ICVN-KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQE 527
+ N K+D++ G LL EL C T QK +GKI+E
Sbjct: 191 MSYNEKSDIWSLGCLLYEL---CALMPPFTAFSQKELAGKIRE 230
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 116
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 117 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 174
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 235 GVLMWEIFT 243
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 319 FKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARL 378
K +KL + G ++ + VAV+ ++ + L++ ++ + H L +L
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKL 242
Query: 379 LGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQF 437
PI ++ E+ A G+L + L K L K + +A+ A +AF++
Sbjct: 243 HAVVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE- 295
Query: 438 EISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSN---SCNNQQAICVN----K 490
H DL++ I + K+A FG+ VG+ +AI K
Sbjct: 296 --QRNYIHRDLRAANILVSASLVCKIADFGLAR----VGAKFPIKWTAPEAINFGSFTIK 349
Query: 491 TDVYDFGVLLLELITGCR 508
+DV+ FG+LL+E++T R
Sbjct: 350 SDVWSFGILLMEIVTYGR 367
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 119
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 120 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 177
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 238 GVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 114
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 115 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTA 172
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 233 GVLMWEIFT 241
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 173
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 174 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 231
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 292 GVLMWEIFT 300
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPL--YVIVEYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ EY + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVEYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +++A FG+ ++ + N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
+KL + G ++ G + + VAV+ ++ + L + L+ + H L RL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ E+ A G+L + L K L K + +A+ A +A+++
Sbjct: 77 TKE---EPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RK 128
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI----------CVN-- 489
H DL++ + + E K+A FG+ + N ++ +N
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 490 ----KTDVYDFGVLLLELIT 505
K++V+ FG+LL E++T
Sbjct: 186 CFTIKSNVWSFGILLYEIVT 205
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 46/215 (21%)
Query: 325 LADSKNGSIYAGVI----GDGSHVAVQKVQCEN--ETDLIQVLSQVELLSAIMHRNLARL 378
L + + GS+ G + G VAV+ ++ +N + ++ + LS+ + H N+ RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 379 LGCCID---SGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
LG CI+ G P+V+ + G L +LL Y RL + + L
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL-----------YSRLETGPKHIPLQTLL 150
Query: 436 QFEISPPI----------FHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQA 485
+F + + H DL + L +D V VA FG+ S + G + A
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGL-SKKIYSGDYYRQGRIA 209
Query: 486 ---------------ICVNKTDVYDFGVLLLELIT 505
+ +K+DV+ FGV + E+ T
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ N + L + +++ + H L +L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 251 E----EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 301
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRL---IEDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 359 FTIKSDVWSFGILLTELTTKGR 380
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + IV Y + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYA--SKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 337 VIGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVY 394
++GD G+ VAV+ ++ N+ L++ +++ + H NL +LLG ++ +V
Sbjct: 29 MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 85
Query: 395 EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
EY A G+L ++L S ++ L L + + + +L+ H DL + +
Sbjct: 86 EYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVL 140
Query: 455 LDEDYCVKVAGFGI---PSTSLGVGSNSCNN------QQAICVNKTDVYDFGVLLLELIT 505
+ ED KV+ FG+ S++ G ++A K+DV+ FG+LL E+ +
Sbjct: 141 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
Query: 506 GCR 508
R
Sbjct: 201 FGR 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 30/195 (15%)
Query: 331 GSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINP 390
G ++ G + VA++ ++ + L + +++ + H L +L + P
Sbjct: 281 GEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE----EP 335
Query: 391 I-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
I +V EY + G+L + L E L + + +AA+ AS +A+++ H DL+
Sbjct: 336 IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLR 390
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN----------------KTDV 493
+ I + E+ KVA FG+ + N +Q K+DV
Sbjct: 391 AANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 494 YDFGVLLLELITGCR 508
+ FG+LL EL T R
Sbjct: 448 WSFGILLTELTTKGR 462
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 31/189 (16%)
Query: 344 VAVQKVQCE-NETDLIQVLSQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ + E DL ++S++E++ I H+N+ LLG C G + V+ Y + G
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL--YVIVGYASKGN 127
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAE-----------TASVLAFLQFEISPPIFHHDLKS 450
L E+L + + +++ + E T + +++ S H DL +
Sbjct: 128 LREYL--RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 451 CYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCNNQ------------QAICVNKTDVYDF 496
+ + E+ +K+A FG+ ++ + N + + +++DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 497 GVLLLELIT 505
GVL+ E+ T
Sbjct: 246 GVLMWEIFT 254
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 30/207 (14%)
Query: 319 FKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARL 378
K +KL + G ++ + VAV+ ++ + L++ ++ + H L +L
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKL 248
Query: 379 LGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQF 437
PI ++ E+ A G+L + L K L K + +A+ A +AF++
Sbjct: 249 HAVVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE- 301
Query: 438 EISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI----------C 487
H DL++ I + K+A FG+ + N ++
Sbjct: 302 --QRNYIHRDLRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEA 356
Query: 488 VN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL+E++T R
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 323 QKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
+K+ +G++Y + + G VA++++ + + +++++ ++ + N+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-- 83
Query: 382 CIDSGFINP--IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
DS + VV EY A G+L + + ++ C+D + IAA L L+F
Sbjct: 84 --DSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQ---IAAVCRECLQALEFLH 133
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGI--------PSTSLGVGSNSCNNQQAICVN-- 489
S + H D+KS I L D VK+ FG S VG+ + +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 490 --KTDVYDFGVLLLELITG 506
K D++ G++ +E+I G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ I H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 323 QKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
+K+ +G++Y + + G VA++++ + + +++++ ++ + N+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-- 83
Query: 382 CIDSGFINP--IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
DS + VV EY A G+L + + ++ C+D + IAA L L+F
Sbjct: 84 --DSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQ---IAAVCRECLQALEFLH 133
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGI--------PSTSLGVGSNSCNNQQAICVN-- 489
S + H D+KS I L D VK+ FG S VG+ + +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 490 --KTDVYDFGVLLLELITG 506
K D++ G++ +E+I G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 323 QKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
+K+ +G++Y + + G VA++++ + + +++++ ++ + N+ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-- 84
Query: 382 CIDSGFINP--IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
DS + VV EY A G+L + + ++ C+D + IAA L L+F
Sbjct: 85 --DSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQ---IAAVCRECLQALEFLH 134
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGI--------PSTSLGVGSNSCNNQQAICVN-- 489
S + H D+KS I L D VK+ FG S VG+ + +
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 490 --KTDVYDFGVLLLELITG 506
K D++ G++ +E+I G
Sbjct: 195 GPKVDIWSLGIMAIEMIEG 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + + G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
+ PI +V EY G+L + LK E +A L + +AA+ A+ +A+++
Sbjct: 74 SEE----PIYIVTEYMNKGSLLD-FLKDGEGRA-LKLPNLVDMAAQVAAGMAYIE---RM 124
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------ 489
H DL+S I + K+A FG+ + N +Q
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 490 ----KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL+T R
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGR 204
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 29/196 (14%)
Query: 331 GSIYAGVIGDGS-----HVAVQKVQC-ENETDLIQVLSQVELLSAIMHRNLARLLGCCID 384
G +Y G++ S VA++ ++ E + L + ++ H N+ RL G
Sbjct: 58 GEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-- 115
Query: 385 SGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIF 444
S + +++ EY NG L++ L + + + L L A LA + +
Sbjct: 116 SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY------V 169
Query: 445 HHDLKSCYIFLDEDYCVKVAGFGIP-----------STSLGVGSNSCNNQQAICVNK--- 490
H DL + I ++ + KV+ FG+ +TS G +AI K
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229
Query: 491 -TDVYDFGVLLLELIT 505
+DV+ FG+++ E++T
Sbjct: 230 ASDVWSFGIVMWEVMT 245
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 250 E----EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 250 E----EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQ--CENETDLIQVLSQVELLSAIMHRNLARLLG 380
Q++ + G ++ G + VA++ ++ +E D I+ + E++ + H L +L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 69
Query: 381 CCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
C++ PI +V+E+ +G L ++L Q+ L + + +A+L+
Sbjct: 70 VCLEQA---PICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLE--- 120
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ-------------AI 486
+ H DL + + E+ +KV+ FG+ L S + +
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 487 CVNKTDVYDFGVLLLELIT 505
+K+DV+ FGVL+ E+ +
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 30/207 (14%)
Query: 319 FKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARL 378
K +KL + G ++ + VAV+ ++ + L++ ++ + H L +L
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKL 75
Query: 379 LGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQF 437
PI ++ E+ A G+L + L K L K + +A+ A +AF++
Sbjct: 76 HAVVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE- 128
Query: 438 EISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAI----------C 487
H DL++ I + K+A FG+ + N ++
Sbjct: 129 --QRNYIHRDLRAANILVSASLVCKIADFGLARV---IEDNEYTAREGAKFPIKWTAPEA 183
Query: 488 VN------KTDVYDFGVLLLELITGCR 508
+N K+DV+ FG+LL+E++T R
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 323 QKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
+K+ +G++Y + + G VA++++ + + +++++ ++ + N+ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-- 83
Query: 382 CIDSGFINP--IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
DS + VV EY A G+L + + ++ C+D + IAA L L+F
Sbjct: 84 --DSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQ---IAAVCRECLQALEFLH 133
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGI--------PSTSLGVGSNSCNNQQAICVN-- 489
S + H D+KS I L D VK+ FG S VG+ + +
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 490 --KTDVYDFGVLLLELITG 506
K D++ G++ +E+I G
Sbjct: 194 GPKVDIWSLGIMAIEMIEG 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 81/206 (39%), Gaps = 33/206 (16%)
Query: 326 ADSKNGSIYAGVIGDGSHV--AVQKVQCENET-DLIQVLSQVE-------LLSAIMHRNL 375
+D G + GV+ G ++ A ++QC ++ I + QVE L+ + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
L+G + + P V+ Y +G L + + D + A LA
Sbjct: 85 LALIGIMLPPEGL-PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNN------------- 482
+F H DL + LDE + VKVA FG+ L S
Sbjct: 144 KF------VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 483 ---QQAICVNKTDVYDFGVLLLELIT 505
Q K+DV+ FGVLL EL+T
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 34/250 (13%)
Query: 344 VAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI-VVYEYPANGTL 402
VA+++++ E+E V ++ LS + H N+ +L G C +NP+ +V EY G+L
Sbjct: 34 VAIKQIESESERKAFIV--ELRQLSRVNHPNIVKLYGAC-----LNPVCLVMEYAEGGSL 86
Query: 403 EEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCV- 461
++L +E + + + +A+L + H DLK + L V
Sbjct: 87 -YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145
Query: 462 KVAGFGIPSTSLGVGSNSCNNQQAICV------------NKTDVYDFGVLLLELITGCRQ 509
K+ FG T+ + ++ NN+ + K DV+ +G++L E+IT +
Sbjct: 146 KICDFG---TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202
Query: 510 ADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRCLLFGRDGKIGMID 569
D+ +I +++ +P + + + + TRC + M +
Sbjct: 203 FDEIGGPAFRIMW---------AVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEE 253
Query: 570 IAKELVHIAK 579
I K + H+ +
Sbjct: 254 IVKIMTHLMR 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 34/250 (13%)
Query: 344 VAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI-VVYEYPANGTL 402
VA+++++ E+E V ++ LS + H N+ +L G C +NP+ +V EY G+L
Sbjct: 35 VAIKQIESESERKAFIV--ELRQLSRVNHPNIVKLYGAC-----LNPVCLVMEYAEGGSL 87
Query: 403 EEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCV- 461
++L +E + + + +A+L + H DLK + L V
Sbjct: 88 -YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 146
Query: 462 KVAGFGIPSTSLGVGSNSCNNQQAICV------------NKTDVYDFGVLLLELITGCRQ 509
K+ FG T+ + ++ NN+ + K DV+ +G++L E+IT +
Sbjct: 147 KICDFG---TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 203
Query: 510 ADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRCLLFGRDGKIGMID 569
D+ +I +++ +P + + + + TRC + M +
Sbjct: 204 FDEIGGPAFRIMW---------AVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEE 254
Query: 570 IAKELVHIAK 579
I K + H+ +
Sbjct: 255 IVKIMTHLMR 264
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 250 E----EPIYIVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 300
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 75 E----EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 125
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 183 FTIKSDVWSFGILLTELTTKGR 204
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 337 VIGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVY 394
++GD G+ VAV+ ++ N+ L++ +++ + H NL +LLG ++ +V
Sbjct: 38 MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 94
Query: 395 EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
EY A G+L ++L S ++ L L + + + +L+ H DL + +
Sbjct: 95 EYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVL 149
Query: 455 LDEDYCVKVAGFGI---PSTSLGVGSNSCNN------QQAICVNKTDVYDFGVLLLELIT 505
+ ED KV+ FG+ S++ G ++ K+DV+ FG+LL E+ +
Sbjct: 150 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
Query: 506 GCR 508
R
Sbjct: 210 FGR 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 74 E----EPIXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 124
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 182 FTIKSDVWSFGILLTELTTKGR 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 73 E----EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 123
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 181 FTIKSDVWSFGILLTELTTKGR 202
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 337 VIGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVY 394
++GD G+ VAV+ ++ N+ L++ +++ + H NL +LLG ++ +V
Sbjct: 210 MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 266
Query: 395 EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
EY A G+L ++L S ++ L L + + + +L+ H DL + +
Sbjct: 267 EYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVL 321
Query: 455 LDEDYCVKVAGFGI---PSTSLGVGSNSCNN------QQAICVNKTDVYDFGVLLLELIT 505
+ ED KV+ FG+ S++ G ++ K+DV+ FG+LL E+ +
Sbjct: 322 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
Query: 506 GCR 508
R
Sbjct: 382 FGR 384
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
+F E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
Query: 519 KIR 521
+R
Sbjct: 240 VLR 242
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQ--CENETDLIQVLSQVELLSAIMHRNLARLLG 380
Q++ + G ++ G + VA++ ++ +E D I+ + E++ + H L +L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 72
Query: 381 CCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
C++ PI +V+E+ +G L ++L Q+ L + + +A+L+
Sbjct: 73 VCLEQA---PICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLE--- 123
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ-------------AI 486
+ H DL + + E+ +KV+ FG+ L S + +
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 487 CVNKTDVYDFGVLLLELIT 505
+K+DV+ FGVL+ E+ +
Sbjct: 184 YSSKSDVWSFGVLMWEVFS 202
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 77 E----EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 127
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 185 FTIKSDVWSFGILLTELTTKGR 206
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C +A+ NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 337 VIGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVY 394
++GD G+ VAV+ ++ N+ L++ +++ + H NL +LLG ++ +V
Sbjct: 23 MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVT 79
Query: 395 EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
EY A G+L ++L S ++ L L + + + +L+ H DL + +
Sbjct: 80 EYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVL 134
Query: 455 LDEDYCVKVAGFGI---PSTSLGVGSNSCNN------QQAICVNKTDVYDFGVLLLELIT 505
+ ED KV+ FG+ S++ G ++ K+DV+ FG+LL E+ +
Sbjct: 135 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
Query: 506 GCR 508
R
Sbjct: 195 FGR 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQ--CENETDLIQVLSQVELLSAIMHRNLARLLG 380
Q++ + G ++ G + VA++ ++ +E D I+ + E++ + H L +L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 69
Query: 381 CCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
C++ PI +V+E+ +G L ++L Q+ L + + +A+L+
Sbjct: 70 VCLEQA---PICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLE--- 120
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ-------------AI 486
+ H DL + + E+ +KV+ FG+ L S + +
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 487 CVNKTDVYDFGVLLLELIT 505
+K+DV+ FGVL+ E+ +
Sbjct: 181 YSSKSDVWSFGVLMWEVFS 199
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 23/187 (12%)
Query: 338 IGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYE 395
+GD G+ VAV+++Q ++++L A+ + + G G + +V E
Sbjct: 34 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 93
Query: 396 YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
Y +G L + L + +A LD + L+ +++ + +L S H DL + I +
Sbjct: 94 YLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILV 147
Query: 456 DEDYCVKVAGFGI---------------PSTSLGVGSNSCNNQQAICVNKTDVYDFGVLL 500
+ + VK+A FG+ P S + I ++DV+ FGV+L
Sbjct: 148 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 207
Query: 501 LELITGC 507
EL T C
Sbjct: 208 YELFTYC 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 23/187 (12%)
Query: 338 IGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYE 395
+GD G+ VAV+++Q ++++L A+ + + G G + +V E
Sbjct: 47 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106
Query: 396 YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
Y +G L + L + +A LD + L+ +++ + +L S H DL + I +
Sbjct: 107 YLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILV 160
Query: 456 DEDYCVKVAGFGI---------------PSTSLGVGSNSCNNQQAICVNKTDVYDFGVLL 500
+ + VK+A FG+ P S + I ++DV+ FGV+L
Sbjct: 161 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 220
Query: 501 LELITGC 507
EL T C
Sbjct: 221 YELFTYC 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 23/187 (12%)
Query: 338 IGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYE 395
+GD G+ VAV+++Q ++++L A+ + + G G + +V E
Sbjct: 35 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 94
Query: 396 YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
Y +G L + L + +A LD + L+ +++ + +L S H DL + I +
Sbjct: 95 YLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILV 148
Query: 456 DEDYCVKVAGFGI---------------PSTSLGVGSNSCNNQQAICVNKTDVYDFGVLL 500
+ + VK+A FG+ P S + I ++DV+ FGV+L
Sbjct: 149 ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 208
Query: 501 LELITGC 507
EL T C
Sbjct: 209 YELFTYC 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQ--CENETDLIQVLSQVELLSAIMHRNLARLLG 380
Q++ + G ++ G + VA++ ++ +E D I+ + E++ + H L +L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 67
Query: 381 CCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
C++ PI +V+E+ +G L ++L Q+ L + + +A+L+
Sbjct: 68 VCLEQA---PICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLE--- 118
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ-------------AI 486
+ H DL + + E+ +KV+ FG+ L S + +
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 487 CVNKTDVYDFGVLLLELIT 505
+K+DV+ FGVL+ E+ +
Sbjct: 179 YSSKSDVWSFGVLMWEVFS 197
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 34/160 (21%)
Query: 372 HRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASV 431
H N+ LLG C G++ + EY +G L + L KS L+ IA TAS
Sbjct: 85 HPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSR----VLETDPAFAIANSTAST 138
Query: 432 LA---FLQFEI----------SPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-------ST 471
L+ L F H DL + I + E+Y K+A FG+
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 472 SLG------VGSNSCNNQQAICVNKTDVYDFGVLLLELIT 505
++G + S N ++ +DV+ +GVLL E+++
Sbjct: 199 TMGRLPVRWMAIESLN--YSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 338 IGD--GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYE 395
+GD G+ VAV+++Q ++++L A+ + + G G +V E
Sbjct: 31 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVME 90
Query: 396 YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
Y +G L + L + +A LD + L+ +++ + +L S H DL + I +
Sbjct: 91 YLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILV 144
Query: 456 DEDYCVKVAGFGI---------------PSTSLGVGSNSCNNQQAICVNKTDVYDFGVLL 500
+ + VK+A FG+ P S + I ++DV+ FGV+L
Sbjct: 145 ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 204
Query: 501 LELITGC 507
EL T C
Sbjct: 205 YELFTYC 211
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ----AICVNK-----TDVYDFGVLLLELIT 505
+D+ ++V FG G C + AI ++K D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ L + +++ + H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 34/160 (21%)
Query: 372 HRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASV 431
H N+ LLG C G++ + EY +G L + L KS L+ IA TAS
Sbjct: 75 HPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSR----VLETDPAFAIANSTAST 128
Query: 432 LA---FLQFEI----------SPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-------ST 471
L+ L F H DL + I + E+Y K+A FG+
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 472 SLG------VGSNSCNNQQAICVNKTDVYDFGVLLLELIT 505
++G + S N ++ +DV+ +GVLL E+++
Sbjct: 189 TMGRLPVRWMAIESLN--YSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYM 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KVA FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 53 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 110
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 111 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 160
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+DE ++V FG G C + + NK D + GVL+ E+
Sbjct: 161 IDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 220
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 221 GYPPFFADQPIQIYEKIVSGKVR 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYM 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGDMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KVA FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 323 QKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC 381
+K+ +G++Y + + G VA++++ + + +++++ ++ + N+ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL-- 84
Query: 382 CIDSGFINP--IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
DS + VV EY A G+L + + ++ C+D + IAA L L+F
Sbjct: 85 --DSYLVGDELWVVMEYLAGGSLTDVVTET-----CMDEGQ---IAAVCRECLQALEFLH 134
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGI--------PSTSLGVGSNSCNNQQAICVN-- 489
S + H ++KS I L D VK+ FG S VG+ + +
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 490 --KTDVYDFGVLLLELITG 506
K D++ G++ +E+I G
Sbjct: 195 GPKVDIWSLGIMAIEMIEG 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQ--CENETDLIQVLSQVELLSAIMHRNLARLLG 380
Q++ + G ++ G + VA++ ++ +E D I+ + E++ + H L +L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE---EAEVMMKLSHPKLVQLYG 89
Query: 381 CCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
C++ PI +V+E+ +G L ++L Q+ L + + +A+L+
Sbjct: 90 VCLEQA---PICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLE--- 140
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ-------------AI 486
+ H DL + + E+ +KV+ FG+ L S + +
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 487 CVNKTDVYDFGVLLLELIT 505
+K+DV+ FGVL+ E+ +
Sbjct: 201 YSSKSDVWSFGVLMWEVFS 219
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G+L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL + I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KVA FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 144
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 145 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVR 277
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----I 468
A K + +A E A +A+L + H DL + + ED+ VK+ FG I
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 469 PSTS---------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
T L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 183 XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 519 KIR 521
+R
Sbjct: 243 VLR 245
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 519 KIR 521
+R
Sbjct: 243 VLR 245
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY + G L + L E L + + +AA+ AS +A+++
Sbjct: 84 E----EPIYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMN 134
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 67 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 120
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ S + +
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPE 177
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 210
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 211 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 270
Query: 519 KIR 521
+R
Sbjct: 271 VLR 273
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G DS + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDSTRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 120 ALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE 176
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 519 KIR 521
+R
Sbjct: 242 VLR 244
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 32/238 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLIQVLSQ 363
E E A S++L G +Y GV+ D + VA++ V + + + I+ L++
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 364 VELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQKACLD 417
++ ++ RLLG S +V+ E G L+ +L ++++ A
Sbjct: 66 ASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 418 WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----- 472
K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 124 LSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 473 --------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQKIR 521
L V S + + + +DV+ FGV+L E+ T Q Q Q +R
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 519 KIR 521
+R
Sbjct: 242 VLR 244
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 519 KIR 521
+R
Sbjct: 249 VLR 251
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 31/210 (14%)
Query: 330 NGSIYA-GVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFI 388
NG YA V+ V +++V+ N+ L +LS + H + R+ G D+ I
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDERL--------MLSIVTHPFIIRMWGTFQDAQQI 81
Query: 389 NPIVVYEYPANGTLEEHLLKSSE-QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHD 447
++ +Y G L L KS +Y AAE L +L S I + D
Sbjct: 82 --FMIMDYIEGGELFSLLRKSQRFPNPVAKFY-----AAEVCLALEYLH---SKDIIYRD 131
Query: 448 LKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNKT-DVYDFGV 498
LK I LD++ +K+ FG V C I NK+ D + FG+
Sbjct: 132 LKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGI 191
Query: 499 LLLELITGCRQ-ADQSTV-TLQKIRSGKIQ 526
L+ E++ G D +T+ T +KI + +++
Sbjct: 192 LIYEMLAGYTPFYDSNTMKTYEKILNAELR 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VAV+ ++ E + + + + + H L + G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI +V EY +NG L +L S K L+ + L + + +AFL+ S
Sbjct: 73 SKE---YPIYIVTEYISNGCLLNYL--RSHGKG-LEPSQLLEMCYDVCEGMAFLE---SH 123
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL------GVGSNSCNNQQAICV------- 488
H DL + +D D CVKV+ FG+ L VG+ A V
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 489 NKTDVYDFGVLLLELIT 505
+K+DV+ FG+L+ E+ +
Sbjct: 184 SKSDVWAFGILMWEVFS 200
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY G+L + L E L + + ++A+ AS +A+++
Sbjct: 81 E----EPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIKWTAPEAALYGR 188
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 189 FTIKSDVWSFGILLTELTTKGR 210
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYA 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KV FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 32/238 (13%)
Query: 311 ELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLIQVLSQ 363
E E A S++L G +Y GV+ D + VA++ V + + + I+ L++
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 364 VELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQKACLD 417
++ ++ RLLG S +V+ E G L+ +L ++++ A
Sbjct: 64 ASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 418 WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTS- 472
K + +A E A +A+L + H DL + + ED+ VK+ FG I T
Sbjct: 122 LSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 473 --------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQKIR 521
L V S + + + +DV+ FGV+L E+ T Q Q Q +R
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYA 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KV FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLI 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ----AICVNK-----TDVYDFGVLLLELIT 505
+D+ ++V FG G C + I ++K D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYA 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KV FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYA 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KV FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 34/194 (17%)
Query: 363 QVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLL------------KSS 410
+ ELL+ + H ++ + G C D + I+V+EY +G L + L +
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPL--IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124
Query: 411 EQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS 470
+ K L + L IA++ AS + +L S H DL + + + VK+ FG+
Sbjct: 125 QAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
Query: 471 TSLGVGSNSCNNQQAICVN--------------KTDVYDFGVLLLELITGCRQAD---QS 513
+ + ++DV+ FGV+L E+ T +Q +
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
Query: 514 TVTLQKIRSGKIQE 527
T ++ I G++ E
Sbjct: 242 TEVIECITQGRVLE 255
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 28/199 (14%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQ--CENETDLIQVLSQVELLSAIMHRNLARLLG 380
Q++ + G ++ G + VA++ ++ +E D I+ + E++ + H L +L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 70
Query: 381 CCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
C++ PI +V E+ +G L ++L Q+ L + + +A+L+
Sbjct: 71 VCLEQA---PICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLE--- 121
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ-------------AI 486
+ H DL + + E+ +KV+ FG+ L S + +
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 487 CVNKTDVYDFGVLLLELIT 505
+K+DV+ FGVL+ E+ +
Sbjct: 182 YSSKSDVWSFGVLMWEVFS 200
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L + ++
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
Query: 519 KIR 521
+R
Sbjct: 239 VLR 241
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 30/202 (14%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
KL G ++ G + VA++ ++ + L + +++ + H L +L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 384 DSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
+ PI +V EY G+L + L E L + + ++A+ AS +A+++
Sbjct: 81 E----EPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMN 131
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H DL++ I + E+ KVA FG+ + N +Q
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 490 ---KTDVYDFGVLLLELITGCR 508
K+DV+ FG+LL EL T R
Sbjct: 189 FTIKSDVWSFGILLTELTTKGR 210
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L + ++
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 519 KIR 521
+R
Sbjct: 249 VLR 251
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 92/229 (40%), Gaps = 47/229 (20%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGC-------------CIDSG 386
DG +++V+ NE + +V+ L+ + H N+ GC ++S
Sbjct: 36 DGKTYVIRRVKYNNE----KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESS 91
Query: 387 FINP--------------IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVL 432
+P + E+ GTLE+ + K +K LD L + + +
Sbjct: 92 DYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLALELFEQITKGV 149
Query: 433 AFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--- 489
++ S + H DLK IFL + VK+ FG+ ++ G + + ++
Sbjct: 150 DYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQ 206
Query: 490 --------KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQEIVD 530
+ D+Y G++L EL+ C A +++ +R G I +I D
Sbjct: 207 ISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFD 255
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 35/194 (18%)
Query: 338 IGDGSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVY 394
I G VAV+ K Q N + L ++ +V ++ + H N+ +L + +V
Sbjct: 29 ILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL--YLVM 85
Query: 395 EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
EY + G + ++L+ W K A+ +++ +Q+ I H DLK+ +
Sbjct: 86 EYASGGEVFDYLVAHG-------WMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLL 138
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN-----------------KTDVYDFG 497
LD D +K+A FG S G N C + + DV+ G
Sbjct: 139 LDADMNIKIADFGF-SNEFTFG----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 193
Query: 498 VLLLELITGCRQAD 511
V+L L++G D
Sbjct: 194 VILYTLVSGSLPFD 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 45/192 (23%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VAV+ K Q N T L ++ +V ++ + H N+ +L + +V EY
Sbjct: 40 GREVAVKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL--YLVMEYA 96
Query: 398 ANGTLEEHL-----LKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
+ G + ++L +K E +A R I++A +Q+ I H DLK+
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARAKF----RQIVSA--------VQYCHQKYIVHRDLKAEN 144
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN-----------------KTDVYD 495
+ LD D +K+A FG S VG N C + + DV+
Sbjct: 145 LLLDGDMNIKIADFGF-SNEFTVG----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 199
Query: 496 FGVLLLELITGC 507
GV+L L++G
Sbjct: 200 LGVILYTLVSGS 211
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 34/160 (21%)
Query: 372 HRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASV 431
H N+ LLG C G++ + EY +G L + L KS L+ IA TAS
Sbjct: 82 HPNIINLLGACEHRGYL--YLAIEYAPHGNLLDFLRKSR----VLETDPAFAIANSTAST 135
Query: 432 LA---FLQFEI----------SPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-------ST 471
L+ L F H +L + I + E+Y K+A FG+
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 472 SLG------VGSNSCNNQQAICVNKTDVYDFGVLLLELIT 505
++G + S N ++ +DV+ +GVLL E+++
Sbjct: 196 TMGRLPVRWMAIESLN--YSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 34/170 (20%)
Query: 361 LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYK 420
L +V+++ + H N+ + +G +N + EY GTL ++KS + + W +
Sbjct: 55 LKEVKVMRCLEHPNVLKFIGVLYKDKRLN--FITEYIKGGTLRG-IIKSMDSQ--YPWSQ 109
Query: 421 RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI----------PS 470
R+ A + AS +A+L S I H DL S + E+ V VA FG+ P
Sbjct: 110 RVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 471 TSLGVGSNSCNNQQAICVN----------------KTDVYDFGVLLLELI 504
+ + + N K DV+ FG++L E+I
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPAN 399
D VAV+ ++ +E+ + ELL+ + H+++ R G C + + ++V+EY +
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRH 127
Query: 400 GTL---------EEHLLKSSEQKA--CLDWYKRLIIAAETASVLAFLQFEISPPIFHHDL 448
G L + LL E A L + L +A++ A+ + +L H DL
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDL 184
Query: 449 KSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICV--------------NKTDVY 494
+ + + VK+ FG+ + + + ++DV+
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 244
Query: 495 DFGVLLLELITGCRQ 509
FGV+L E+ T +Q
Sbjct: 245 SFGVVLWEIFTYGKQ 259
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIY----AGVIGDG--SHVAVQKV-QCENETDLI 358
++ E E A S++L G +Y GV+ D + VA++ V + + + I
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +V+ E G L+ +L ++++
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
A K + +A E A +A+L + H DL + + ED+ VK+ FG+
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V S + + + +DV+ FGV+L E+ T Q Q Q
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
Query: 519 KIR 521
+R
Sbjct: 236 VLR 238
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTFEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + F H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGF------VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ + A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNS--NLYMVLEYA 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KVA FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L ++ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYA 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ +KV FG+ G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 69 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE 179
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGF-INP-------- 390
DG +++V+ NE + +V+ L+ + H N+ GC GF +P
Sbjct: 35 DGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGCW--DGFDYDPETSSKNSS 88
Query: 391 -------IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPI 443
+ E+ GTLE+ + K +K LD L + + + ++ S +
Sbjct: 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLALELFEQITKGVDYIH---SKKL 143
Query: 444 FHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICV------------NKT 491
+ DLK IFL + VK+ FG+ TSL ++ + +
Sbjct: 144 INRDLKPSNIFLVDTKQVKIGDFGL-VTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEV 202
Query: 492 DVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQEIVD 530
D+Y G++L EL+ C A +++ +R G I +I D
Sbjct: 203 DLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFD 241
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYA 123
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 124 PGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 176
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
+KV FG G C + + NK D + GVL+ E+ G
Sbjct: 177 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 237 PFFADQPIQIYEKIVSGKVR 256
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS--NLYMVMEYA 124
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 125 PGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 177
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
+KV FG G C + + NK D + GVL+ E+ G
Sbjct: 178 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 238 PFFADQPIQIYEKIVSGKVR 257
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPAN 399
D VAV+ ++ +E+ + ELL+ + H+++ R G C + + ++V+EY +
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRH 98
Query: 400 GTL---------EEHLLKSSEQKA--CLDWYKRLIIAAETASVLAFLQFEISPPIFHHDL 448
G L + LL E A L + L +A++ A+ + +L H DL
Sbjct: 99 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDL 155
Query: 449 KSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTDVY 494
+ + + VK+ FG+ + + + ++DV+
Sbjct: 156 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 215
Query: 495 DFGVLLLELITGCRQ 509
FGV+L E+ T +Q
Sbjct: 216 SFGVVLWEIFTYGKQ 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 144
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
A G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 145 AGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 197
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 198 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 258 PFFADQPIQIYEKIVSGKVR 277
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
A G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 124 AGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 237 PFFADQPIQIYEKIVSGKVR 256
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + +E A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFAEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
A G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 124 AGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 237 PFFADQPIQIYEKIVSGKVR 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE 176
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
A G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 124 AGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 237 PFFADQPIQIYEKIVSGKVR 256
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 340 DGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPAN 399
D VAV+ ++ +E+ + ELL+ + H+++ R G C + + ++V+EY +
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL--LMVFEYMRH 104
Query: 400 GTL---------EEHLLKSSEQKA--CLDWYKRLIIAAETASVLAFLQFEISPPIFHHDL 448
G L + LL E A L + L +A++ A+ + +L H DL
Sbjct: 105 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDL 161
Query: 449 KSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTDVY 494
+ + + VK+ FG+ + + + ++DV+
Sbjct: 162 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 221
Query: 495 DFGVLLLELITGCRQ 509
FGV+L E+ T +Q
Sbjct: 222 SFGVVLWEIFTYGKQ 236
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 68 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 121
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 178
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 92 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 145
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 202
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVG 228
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 71 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 124
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYA 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 67 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 120
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPE 177
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 61 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 118
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
A G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 119 AGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 171
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 172 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 231
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 232 PFFADQPIQIYEKIVSGKVR 251
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 52 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 109
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 110 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 159
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 160 IDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 219
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 220 GYPPFFADQPIQIYEKIVSGKVR 242
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 176
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTFEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ ++
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G AD+ +KI SGK++
Sbjct: 234 GYPPFFADEPIQIYEKIVSGKVR 256
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 69 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 83 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 136
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 137 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 193
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVG 219
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY G + + L K S+ D + E A+
Sbjct: 71 RHPNILRLYGYFHDATRV--YLILEYAPRGEVYKELQKLSK----FDEQRTATYITELAN 124
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPE 181
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 71 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 124
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVG 207
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 69 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTFEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTFEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 116
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 117 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 166
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 227 GYPPFFADQPIQIYEKIVSGKVR 249
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 70 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 123
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 180
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 68 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 121
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 178
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVG 204
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY G + + L K S+ D + E A+
Sbjct: 71 RHPNILRLYGYFHDATRV--YLILEYAPRGEVYKELQKLSK----FDEQRTATYITELAN 124
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 69 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 329 KNGSIYAGVIGDGSHVAVQKVQCENETDLI--QVLSQVELLSAIMHRNLARLL---GCCI 383
+ G++Y G + D VAV+ N + I + + +V L+ H N+AR +
Sbjct: 25 RYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLME---HDNIARFIVGDERVT 80
Query: 384 DSGFINPIVVYEYPANGTLEEHL-LKSSEQKACLDWYKRLIIAAETASVLAFLQFEI--- 439
G + ++V EY NG+L ++L L +S DW +A LA+L E+
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 440 ---SPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
P I H DL S + + D ++ FG+
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 87 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 144
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 145 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 255 GYPPFFADQPIQIYEKIVSGKVR 277
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 124
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 125 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 235 GYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 319 FKDSQKLADSKNGSIYAGVIGD-GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLAR 377
+ D + L NG +++ V D VA++K+ + + L +++++ + H N+ +
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 378 LLGCCIDSGF-----------INPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIA 425
+ SG +N + +V EY +E L EQ L+ + RL +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEY-----METDLANVLEQGPLLEEHARLFM- 126
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLD-EDYCVKVAGFGI 468
+L L++ S + H DLK +F++ ED +K+ FG+
Sbjct: 127 ---YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGL 167
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 65 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 118
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 119 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 175
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVG 201
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTFEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 324 KLADSKNGSI-YAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
K+ + G + A V G VAV+K+ + + ++V ++ H N+ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 383 IDSGFINPIVVYEYPANGTLEE---HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
+ + VV E+ G L + H + EQ IAA +VL L
Sbjct: 218 LVGDEL--WVVMEFLEGGALTDIVTHTRMNEEQ-----------IAAVCLAVLQALSVLH 264
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFG--------IPSTSLGVGSNSCNNQQAICV--- 488
+ + H D+KS I L D VK++ FG +P VG+ + I
Sbjct: 265 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 324
Query: 489 -NKTDVYDFGVLLLELITG 506
+ D++ G++++E++ G
Sbjct: 325 GPEVDIWSLGIMVIEMVDG 343
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTYEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L ++ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYA 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG+ G C + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 45/196 (22%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VAV+ K Q N + L ++ +V ++ + H N+ +L + +V EY
Sbjct: 39 GKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL--YLVMEYA 95
Query: 398 ANGTLEEHL-----LKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
+ G + ++L +K E +A R I++A +Q+ I H DLK+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKF----RQIVSA--------VQYCHQKFIVHRDLKAEN 143
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN-----------------KTDVYD 495
+ LD D +K+A FG S G N A C + DV+
Sbjct: 144 LLLDADMNIKIADFGF-SNEFTFG----NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWS 198
Query: 496 FGVLLLELITGCRQAD 511
GV+L L++G D
Sbjct: 199 LGVILYTLVSGSLPFD 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPE 176
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 176
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 28/170 (16%)
Query: 363 QVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEH---------LLKSSEQK 413
+ ELL+ + H ++ + G C++ + I+V+EY +G L + L+
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEGDPL--IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP 122
Query: 414 ACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL 473
L + L IA + A+ + +L S H DL + + E+ VK+ FG+
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 474 GVGSNSCNNQQAICV--------------NKTDVYDFGVLLLELITGCRQ 509
+ + ++DV+ GV+L E+ T +Q
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 24 HTYEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 82
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 83 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 140
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 141 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRV 194
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 195 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTYEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V EY NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 23/203 (11%)
Query: 319 FKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAIMHRN 374
F + L K G++Y + KV Q E Q+ +VE+ S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 375 LARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAF 434
+ RL G D+ + ++ EY GT+ L K S D + E A+ L++
Sbjct: 74 ILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSY 127
Query: 435 LQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAICV-- 488
S + H D+K + L + +K+A FG PS+ + + +
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 489 ----NKTDVYDFGVLLLELITGC 507
K D++ GVL E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 23/203 (11%)
Query: 319 FKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAIMHRN 374
F + L K G++Y + KV Q E Q+ +VE+ S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 375 LARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAF 434
+ RL G D+ + ++ EY GT+ L K S D + E A+ L++
Sbjct: 74 ILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSY 127
Query: 435 LQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAICV-- 488
S + H D+K + L + +K+A FG PS+ + + +
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 489 ----NKTDVYDFGVLLLELITGC 507
K D++ GVL E + G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 29/209 (13%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 71 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 124
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNN---- 482
L++ S + H D+K + L +K+A FG PS+ ++ C
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 178
Query: 483 -----QQAICVNKTDVYDFGVLLLELITG 506
+ + K D++ GVL E + G
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 42/200 (21%)
Query: 342 SHVAVQKVQCENETDL-IQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI-VVYEYPAN 399
+ VAV+ ++ E D+ + L++ + N+ +LLG C P+ +++EY A
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC---AVGKPMCLLFEYMAY 134
Query: 400 GTLEEHLLKSSEQKAC--------------------LDWYKRLIIAAETASVLAFLQFEI 439
G L E L S C L ++L IA + A+ +A+L
Sbjct: 135 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER- 193
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICV----------- 488
H DL + + E+ VK+A FG+ + AI +
Sbjct: 194 --KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN 251
Query: 489 ---NKTDVYDFGVLLLELIT 505
++DV+ +GV+L E+ +
Sbjct: 252 RYTTESDVWAYGVVLWEIFS 271
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 324 KLADSKNGSI-YAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
K+ + G + A V G VAV+K+ + + ++V ++ H N+ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 383 IDSGFINPIVVYEYPANGTLEE---HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
+ + VV E+ G L + H + EQ IAA +VL L
Sbjct: 141 LVGDEL--WVVMEFLEGGALTDIVTHTRMNEEQ-----------IAAVCLAVLQALSVLH 187
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFG--------IPSTSLGVGSNSCNNQQAICV--- 488
+ + H D+KS I L D VK++ FG +P VG+ + I
Sbjct: 188 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 247
Query: 489 -NKTDVYDFGVLLLELITG 506
+ D++ G++++E++ G
Sbjct: 248 GPEVDIWSLGIMVIEMVDG 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPE 176
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 29/184 (15%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VA++ K Q N T L ++ +V ++ + H N+ +L + ++ EY
Sbjct: 37 GREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL--YLIMEYA 93
Query: 398 ANGTLEEHLLKSSEQKACLDWYK-RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD 456
+ G + ++L+ K K R I++A +Q+ I H DLK+ + LD
Sbjct: 94 SGGEVFDYLVAHGRMKEKEARSKFRQIVSA--------VQYCHQKRIVHRDLKAENLLLD 145
Query: 457 EDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICVN----------KTDVYDFGVLLLEL 503
D +K+A FG S VG C + + DV+ GV+L L
Sbjct: 146 ADMNIKIADFGF-SNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 204
Query: 504 ITGC 507
++G
Sbjct: 205 VSGS 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 69 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 179
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 361 LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYK 420
L + ++ H N+ RL G S + ++V EY NG+L+ L K Q +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVG 139
Query: 421 RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP----------- 469
L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 140 MLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 193
Query: 470 STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 194 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 29/209 (13%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 67 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 120
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNN---- 482
L++ S + H D+K + L +K+A FG PS+ ++ C
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 174
Query: 483 -----QQAICVNKTDVYDFGVLLLELITG 506
+ + K D++ GVL E + G
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 63 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 116
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 173
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVG 199
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 29/209 (13%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNN---- 482
L++ S + H D+K + L +K+A FG PS+ ++ C
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 483 -----QQAICVNKTDVYDFGVLLLELITG 506
+ + K D++ GVL E + G
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG-TLEEHLLKSSEQKACLD 417
QV ++ +L + H N+ +L+ D + +V+E G +E LK +
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARF 141
Query: 418 WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-------- 469
+++ LI E +L ++ I H D+K + + ED +K+A FG+
Sbjct: 142 YFQDLIKGIE------YLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 470 --STSLG----VGSNSCNNQQAICVNKT-DVYDFGVLLLELITG-CRQADQSTVTLQ-KI 520
S ++G + S + + I K DV+ GV L + G C D+ + L KI
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI 252
Query: 521 RSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRCL 557
+S +L + +QP + E + D+ TR L
Sbjct: 253 KSQ--------ALEFPDQP----DIAEDLKDLITRML 277
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 361 LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYK 420
L + ++ H N+ RL G S + ++V EY NG+L+ L K Q +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEYMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 421 RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP----------- 469
L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 123 MLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 470 STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 92 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 145
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE 202
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVG 228
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 29/209 (13%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 66 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 119
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNN---- 482
L++ S + H D+K + L +K+A FG PS+ ++ C
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 483 -----QQAICVNKTDVYDFGVLLLELITG 506
+ + K D++ GVL E + G
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 324 KLADSKNGSI-YAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
K+ + G + A V G VAV+K+ + + ++V ++ H N+ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 383 IDSGFINPIVVYEYPANGTLEE---HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
+ + VV E+ G L + H + EQ IAA +VL L
Sbjct: 98 LVGDEL--WVVMEFLEGGALTDIVTHTRMNEEQ-----------IAAVCLAVLQALSVLH 144
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFG--------IPSTSLGVGSNSCNNQQAICV--- 488
+ + H D+KS I L D VK++ FG +P VG+ + I
Sbjct: 145 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 204
Query: 489 -NKTDVYDFGVLLLELITG 506
+ D++ G++++E++ G
Sbjct: 205 GPEVDIWSLGIMVIEMVDG 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 344 VAVQKVQCENETDLIQVL-SQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ D + L S+++++S + H N+ LLG C G + +V+ EY G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGD 136
Query: 402 LEEHLLKSSEQK------ACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
L L + +E L+ L +++ A +AFL S H D+ + + L
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 193
Query: 456 DEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTDVYDFGVLLL 501
+ K+ FG+ + + + V ++DV+ +G+LL
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 253
Query: 502 ELIT 505
E+ +
Sbjct: 254 EIFS 257
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 324 KLADSKNGSI-YAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
K+ + G + A V G VAV+K+ + + ++V ++ H N+ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 383 IDSGFINPIVVYEYPANGTLEE---HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
+ + VV E+ G L + H + EQ IAA +VL L
Sbjct: 96 LVGDEL--WVVMEFLEGGALTDIVTHTRMNEEQ-----------IAAVCLAVLQALSVLH 142
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFG--------IPSTSLGVGSNSCNNQQAICV--- 488
+ + H D+KS I L D VK++ FG +P VG+ + I
Sbjct: 143 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 202
Query: 489 -NKTDVYDFGVLLLELITG 506
+ D++ G++++E++ G
Sbjct: 203 GPEVDIWSLGIMVIEMVDG 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 324 KLADSKNGSI-YAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
K+ + G + A V G VAV+K+ + + ++V ++ H N+ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 383 IDSGFINPIVVYEYPANGTLEE---HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
+ + VV E+ G L + H + EQ IAA +VL L
Sbjct: 87 LVGDEL--WVVMEFLEGGALTDIVTHTRMNEEQ-----------IAAVCLAVLQALSVLH 133
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFG--------IPSTSLGVGSNSCNNQQAICV--- 488
+ + H D+KS I L D VK++ FG +P VG+ + I
Sbjct: 134 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 193
Query: 489 -NKTDVYDFGVLLLELITG 506
+ D++ G++++E++ G
Sbjct: 194 GPEVDIWSLGIMVIEMVDG 212
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G + + NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 324 KLADSKNGSI-YAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
K+ + G + A V G VAV+K+ + + ++V ++ H N+ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 383 IDSGFINPIVVYEYPANGTLEE---HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
+ + VV E+ G L + H + EQ IAA +VL L
Sbjct: 91 LVGDEL--WVVMEFLEGGALTDIVTHTRMNEEQ-----------IAAVCLAVLQALSVLH 137
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFG--------IPSTSLGVGSNSCNNQQAICV--- 488
+ + H D+KS I L D VK++ FG +P VG+ + I
Sbjct: 138 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 197
Query: 489 -NKTDVYDFGVLLLELITG 506
+ D++ G++++E++ G
Sbjct: 198 GPEVDIWSLGIMVIEMVDG 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 45/196 (22%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VAV+ K Q N + L ++ +V ++ + H N+ +L + +V EY
Sbjct: 39 GKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL--YLVMEYA 95
Query: 398 ANGTLEEHL-----LKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
+ G + ++L +K E +A R I++A +Q+ I H DLK+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKF----RQIVSA--------VQYCHQKFIVHRDLKAEN 143
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN-----------------KTDVYD 495
+ LD D +K+A FG S G N C + + DV+
Sbjct: 144 LLLDADMNIKIADFGF-SNEFTFG----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 198
Query: 496 FGVLLLELITGCRQAD 511
GV+L L++G D
Sbjct: 199 LGVILYTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 45/199 (22%)
Query: 338 IGDGSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVY 394
I G VAV+ K Q N + L ++ +V ++ + H N+ +L + +V
Sbjct: 36 ILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL--YLVM 92
Query: 395 EYPANGTLEEHL-----LKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
EY + G + ++L +K E +A R I++A +Q+ I H DLK
Sbjct: 93 EYASGGEVFDYLVAHGRMKEKEARAKF----RQIVSA--------VQYCHQKFIVHRDLK 140
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN-----------------KTD 492
+ + LD D +K+A FG S G N C + + D
Sbjct: 141 AENLLLDADMNIKIADFGF-SNEFTFG----NKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 493 VYDFGVLLLELITGCRQAD 511
V+ GV+L L++G D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 45/196 (22%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VAV+ K Q N + L ++ +V ++ + H N+ +L + +V EY
Sbjct: 39 GKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL--YLVMEYA 95
Query: 398 ANGTLEEHL-----LKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
+ G + ++L +K E +A R I++A +Q+ I H DLK+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKF----RQIVSA--------VQYCHQKFIVHRDLKAEN 143
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN-----------------KTDVYD 495
+ LD D +K+A FG S G N C + + DV+
Sbjct: 144 LLLDADMNIKIADFGF-SNEFTFG----NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 198
Query: 496 FGVLLLELITGCRQAD 511
GV+L L++G D
Sbjct: 199 LGVILYTLVSGSLPFD 214
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKV----QCENETDLIQVLSQVELLSAI 370
A F+ + L K G++Y + KV Q E Q+ +VE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ RL G D+ + ++ EY GT+ L K S+ D + E A+
Sbjct: 69 RHPNILRLYGYFHDATRV--YLILEYAPLGTVYRELQKLSK----FDEQRTATYITELAN 122
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCNNQQAI 486
L++ S + H D+K + L +K+A FG PS+ + +
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE 179
Query: 487 CV------NKTDVYDFGVLLLELITG 506
+ K D++ GVL E + G
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVG 205
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 324 KLADSKNGSIYAGVI-GDGSHVAVQKVQ---CENETDLIQVLSQVELLSAIMHRNLARLL 379
KL ++ +G ++ G G+ V V KV+ D + ++ + S H N+ +L
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS---HPNVLPVL 73
Query: 380 GCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
G C +P ++ + G+L L + + +D + + A + A +AFL +
Sbjct: 74 GACQSPPAPHPTLITHWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLH-TL 130
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKV----------------AGFGIPSTSLGVGSNSCNNQ 483
P I H L S + +DED ++ A + +L N +
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRR 190
Query: 484 QAICVNKTDVYDFGVLLLELIT 505
A D++ F VLL EL+T
Sbjct: 191 SA------DMWSFAVLLWELVT 206
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 67 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 124
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 125 PGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 178 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 238 PFFADQPIQIYEKIVSGKVR 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 344 VAVQKVQCENETDLIQVL-SQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ D + L S+++++S + H N+ LLG C G + +V+ EY G
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGD 128
Query: 402 LEEHLLKSSEQK------ACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
L L + +E L+ L +++ A +AFL S H D+ + + L
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 185
Query: 456 DEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTDVYDFGVLLL 501
+ K+ FG+ + + + V ++DV+ +G+LL
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
Query: 502 ELIT 505
E+ +
Sbjct: 246 EIFS 249
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 59 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 116
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 117 PGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 169
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 170 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 230 PFFADQPIQIYEKIVSGKVR 249
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 124 PGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 237 PFFADQPIQIYEKIVSGKVR 256
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 23/200 (11%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
G + HL + + + R AA+ +L S + + DLK + +D+
Sbjct: 124 PGGEMFSHLRRIGR---FXEPHARFY-AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 458 DYCVKVAGFGIPSTSLGVGSNSCNNQQAIC--------VNK-TDVYDFGVLLLELITGCR 508
++V FG G C + + NK D + GVL+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 509 Q--ADQSTVTLQKIRSGKIQ 526
ADQ +KI SGK++
Sbjct: 237 PFFADQPIQIYEKIVSGKVR 256
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 31/188 (16%)
Query: 344 VAVQKVQCENETDLIQVL-SQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ D + L S+++++S + H N+ LLG C G + +V+ EY G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGD 136
Query: 402 LEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE----------ISPPIFHHDLKSC 451
L L + S L+ IA TAS L F S H D+ +
Sbjct: 137 LLNFLRRKSR---VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 452 YIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTDVYDFG 497
+ L + K+ FG+ + + + V ++DV+ +G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 498 VLLLELIT 505
+LL E+ +
Sbjct: 254 ILLWEIFS 261
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 29/183 (15%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VA++ K Q N T L ++ +V ++ + H N+ +L + ++ EY
Sbjct: 40 GREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL--YLIMEYA 96
Query: 398 ANGTLEEHLLKSSEQKACLDWYK-RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD 456
+ G + ++L+ K K R I++A +Q+ I H DLK+ + LD
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARSKFRQIVSA--------VQYCHQKRIVHRDLKAENLLLD 148
Query: 457 EDYCVKVAGFGIPSTSLGVGSN-------------SCNNQQAICVNKTDVYDFGVLLLEL 503
D +K+A FG S VG + + DV+ GV+L L
Sbjct: 149 ADMNIKIADFGF-SNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 207
Query: 504 ITG 506
++G
Sbjct: 208 VSG 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 39/265 (14%)
Query: 314 EATRGFKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAI 370
E F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ +LL + +V+E+ L + L K + A L +I +
Sbjct: 67 NHPNIVKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQ 118
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK 490
+L L F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYR 177
Query: 491 --------------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVD 530
D++ G + E++T G + DQ + + G E+V
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 235
Query: 531 PSL-----YYHEQPIFRREQMEKVA 550
P + Y P + R+ KV
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVV 260
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
Query: 341 GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANG 400
G VAV+K+ + + ++V ++ H N+ + + + VV E+ G
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDEL--WVVMEFLEGG 127
Query: 401 TLEE---HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE 457
L + H + EQ IA SVL L + + + H D+KS I L
Sbjct: 128 ALTDIVTHTRMNEEQ-----------IATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS 176
Query: 458 DYCVKVAGFG--------IPSTSLGVGSNSCNNQQAICV----NKTDVYDFGVLLLELIT 505
D +K++ FG +P VG+ + I + D++ G++++E+I
Sbjct: 177 DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
Query: 506 G 506
G
Sbjct: 237 G 237
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VAV+ K Q N + L ++ +V ++ + H N+ +L + +V EY
Sbjct: 39 GKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL--YLVMEYA 95
Query: 398 ANGTLEEHL-----LKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
+ G + ++L +K E +A R I++A +Q+ I H DLK+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEARAKF----RQIVSA--------VQYCHQKFIVHRDLKAEN 143
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICVN----------KTDVYDFGVL 499
+ LD D +K+A FG S G+ C + + DV+ GV+
Sbjct: 144 LLLDADMNIKIADFGF-SNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 202
Query: 500 LLELITGCRQAD 511
L L++G D
Sbjct: 203 LYTLVSGSLPFD 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 39/265 (14%)
Query: 314 EATRGFKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAI 370
E F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 371 MHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETAS 430
H N+ +LL + +V+E+ L + L K + A L +I +
Sbjct: 67 NHPNIVKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQ 118
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK 490
+L L F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYR 177
Query: 491 --------------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVD 530
D++ G + E++T G + DQ + + G E+V
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 235
Query: 531 PSL-----YYHEQPIFRREQMEKVA 550
P + Y P + R+ KV
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVV 260
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 29/203 (14%)
Query: 341 GSHVAVQKVQCENETDLIQV---LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G+H A++ + + L Q+ L++ +L A+ L +L D+ N +V EY
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVMEYV 123
Query: 398 ANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
A G + HL + SE A AA+ +L S + + DLK +
Sbjct: 124 AGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 455 LDEDYCVKVAGFGIPSTSLG-----VGSNSCNNQQAIC---VNK-TDVYDFGVLLLELIT 505
+D+ ++V FG G G+ + I NK D + GVL+ E+
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 506 GCRQ--ADQSTVTLQKIRSGKIQ 526
G ADQ +KI SGK++
Sbjct: 234 GYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDL---IQVLSQVELLSAIMHRN 374
F+ +K+ + +Y A + DG VA++KVQ + D + +++LL + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 375 LARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAF 434
+ + I+ +N +V E G L + +QK + + S L
Sbjct: 94 VIKYYASFIEDNELN--IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 435 LQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI---------PSTSLGVGSNSCNNQQA 485
+ S + H D+K +F+ VK+ G+ + SL VG+ + +
Sbjct: 152 MH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL-VGTPYYMSPER 207
Query: 486 ICVN----KTDVYDFGVLLLEL 503
I N K+D++ G LL E+
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEM 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VA++ ++ E + + + +++ + H L +L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY ANG L +L E + + L + + + +L+ S
Sbjct: 89 TKQ---RPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SK 139
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL------GVGSNSCNNQQAICV------- 488
H DL + +++ VKV+ FG+ L VGS V
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 489 NKTDVYDFGVLLLELIT 505
+K+D++ FGVL+ E+ +
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VA++ ++ E + + + +++ + H L +L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY ANG L +L E + + L + + + +L+ S
Sbjct: 89 TKQ---RPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SK 139
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL------GVGSNSCNNQQAICV------- 488
H DL + +++ VKV+ FG+ L VGS V
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 489 NKTDVYDFGVLLLELIT 505
+K+D++ FGVL+ E+ +
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 28/248 (11%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
+L D G +Y + S +A KV ++E +L + ++++L++ H N+ +LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
N ++ E+ A G ++ +L E + L + ++ +T L +L
Sbjct: 104 YYEN--NLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG--------VGSNSCNNQQAICVN----- 489
I H DLK+ I D +K+A FG+ + + +G+ + +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 490 ----KTDVYDFGVLLLEL--ITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRR 543
K DV+ G+ L+E+ I L KI + + PS + F +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 544 EQMEKVAD 551
+ +EK D
Sbjct: 276 KCLEKNVD 283
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 345 AVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEE 404
+ K Q + +TD +L +V+LL + H N+ +L D G+ +V E G L +
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYF--YLVGEVYTGGELFD 115
Query: 405 HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD---EDYCV 461
++ + + A VL+ + + I H DLK + L+ +D +
Sbjct: 116 EIISRKR-------FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANI 168
Query: 462 KVAGFGIPSTSLGVGSNSCNNQQAICV----------NKTDVYDFGVLLLELITGC---R 508
++ FG+ + A + K DV+ GV+L L++GC
Sbjct: 169 RIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
Query: 509 QADQSTVTLQKIRSGK 524
A++ + L+K+ GK
Sbjct: 229 GANEYDI-LKKVEKGK 243
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VA++ ++ E + + + +++ + H L +L G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY ANG L +L E + + L + + + +L+ S
Sbjct: 80 TKQ---RPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SK 130
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL------GVGSNSCNNQQAICV------- 488
H DL + +++ VKV+ FG+ L VGS V
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 489 NKTDVYDFGVLLLELIT 505
+K+D++ FGVL+ E+ +
Sbjct: 191 SKSDIWAFGVLMWEIYS 207
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 28/248 (11%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
+L D G +Y + S +A KV ++E +L + ++++L++ H N+ +LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
N ++ E+ A G ++ +L E + L + ++ +T L +L
Sbjct: 104 YYEN--NLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG--------VGSNSCNNQQAICVN----- 489
I H DLK+ I D +K+A FG+ + + +G+ + +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 490 ----KTDVYDFGVLLLEL--ITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRR 543
K DV+ G+ L+E+ I L KI + + PS + F +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 544 EQMEKVAD 551
+ +EK D
Sbjct: 276 KCLEKNVD 283
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 41/194 (21%)
Query: 341 GSHVAVQ---KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYP 397
G VAV+ K Q N + L ++ +V + + H N+ +L + +V EY
Sbjct: 39 GKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTL--YLVXEYA 95
Query: 398 ANGTLEEHLL---KSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
+ G + ++L+ + E++A A+ +++ +Q+ I H DLK+ +
Sbjct: 96 SGGEVFDYLVAHGRXKEKEA----------RAKFRQIVSAVQYCHQKFIVHRDLKAENLL 145
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAIC-----------------VNKTDVYDFG 497
LD D +K+A FG S G N A C + DV+ G
Sbjct: 146 LDADXNIKIADFGF-SNEFTFG----NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 498 VLLLELITGCRQAD 511
V+L L++G D
Sbjct: 201 VILYTLVSGSLPFD 214
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 28/248 (11%)
Query: 324 KLADSKNGSIYAGVIGDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
+L D G +Y + S +A KV ++E +L + ++++L++ H N+ +LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
N ++ E+ A G ++ +L E + L + ++ +T L +L
Sbjct: 104 YYEN--NLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLH---DNK 155
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG--------VGSNSCNNQQAICVN----- 489
I H DLK+ I D +K+A FG+ + + +G+ + +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 490 ----KTDVYDFGVLLLEL--ITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRR 543
K DV+ G+ L+E+ I L KI + + PS + F +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 544 EQMEKVAD 551
+ +EK D
Sbjct: 276 KCLEKNVD 283
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 36/195 (18%)
Query: 344 VAVQKVQCEN--ETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ EN ++L +LS+ +L + H ++ +L G C G + +++ EY G+
Sbjct: 56 VAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGS 112
Query: 402 LEEHLLKSSE------------QKACLDWYKRLIIAAETASVLAF-----LQFEISPPIF 444
L L +S + + LD + A+ +Q+ +
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV 172
Query: 445 HHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------K 490
H DL + I + E +K++ FG+ S +Q I V +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 491 TDVYDFGVLLLELIT 505
+DV+ FGVLL E++T
Sbjct: 233 SDVWSFGVLLWEIVT 247
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VA++ ++ E + + + +++ + H L +L G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY ANG L +L E + + L + + + +L+ S
Sbjct: 73 TKQ---RPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SK 123
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL------GVGSNSCNNQQAICV------- 488
H DL + +++ VKV+ FG+ L VGS V
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 489 NKTDVYDFGVLLLELIT 505
+K+D++ FGVL+ E+ +
Sbjct: 184 SKSDIWAFGVLMWEIYS 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 344 VAVQKVQCEN-ETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGT- 401
VA++++ E +T + ++L +++ +S H N+ + + +V + + G+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL--WLVMKLLSGGSV 100
Query: 402 --LEEHLLKSSEQKA-CLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDED 458
+ +H++ E K+ LD IA VL L++ H D+K+ I L ED
Sbjct: 101 LDIIKHIVAKGEHKSGVLD---ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 157
Query: 459 YCVKVAGFGIPSTSLGVGSNSCNNQ-QAICVN------------------KTDVYDFGVL 499
V++A FG+ S L G + N+ + V K D++ FG+
Sbjct: 158 GSVQIADFGV-SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 216
Query: 500 LLELITGC 507
+EL TG
Sbjct: 217 AIELATGA 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 22/154 (14%)
Query: 341 GSHVAVQKVQCENETD--LIQVLSQVELLSAIMHRNLARLLGCCIDS--------GFINP 390
G VA++KV ENE + I L ++++L + H N+ L+ C G I
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 391 IVVY-EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
+ + E+ G L L+K + L KR++ +L L + I H D+K
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM-----QMLLNGLYYIHRNKILHRDMK 152
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ 483
+ + + D +K+A FG+ + + + NS N+
Sbjct: 153 AANVLITRDGVLKLADFGL-ARAFSLAKNSQPNR 185
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 344 VAVQKVQCEN-ETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGT- 401
VA++++ E +T + ++L +++ +S H N+ + + +V + + G+
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL--WLVMKLLSGGSV 95
Query: 402 --LEEHLLKSSEQKA-CLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDED 458
+ +H++ E K+ LD IA VL L++ H D+K+ I L ED
Sbjct: 96 LDIIKHIVAKGEHKSGVLD---ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED 152
Query: 459 YCVKVAGFGIPSTSLGVGSNSCNNQ-QAICVN------------------KTDVYDFGVL 499
V++A FG+ S L G + N+ + V K D++ FG+
Sbjct: 153 GSVQIADFGV-SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 211
Query: 500 LLELITGC 507
+EL TG
Sbjct: 212 AIELATGA 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 41/181 (22%)
Query: 360 VLSQVELLSAI-MHRNLARLLGCCIDSGFINPI-VVYEYPANGTLEEHL----------- 406
++S++++++ + H N+ LLG C SG PI +++EY G L +L
Sbjct: 95 LMSELKMMTQLGSHENIVNLLGACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDE 151
Query: 407 --------LKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDED 458
L+ E L + L A + A + FL+F+ H DL + + +
Sbjct: 152 IEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHG 208
Query: 459 YCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTDVYDFGVLLLELI 504
VK+ FG+ + + + V K+DV+ +G+LL E+
Sbjct: 209 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
Query: 505 T 505
+
Sbjct: 269 S 269
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VA++ ++ E + + + +++ + H L +L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY ANG L +L E + + L + + + +L+ S
Sbjct: 74 TKQ---RPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SK 124
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL------GVGSNSCNNQQAICV------- 488
H DL + +++ VKV+ FG+ L VGS V
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 489 NKTDVYDFGVLLLELIT 505
+K+D++ FGVL+ E+ +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ LK+ + L +I + +L L
Sbjct: 68 VKLLDVIHTENKL--YLVFEFLHQD------LKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 236
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 237 MPDYKPSFPKWARQDFSKVV 256
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 36/195 (18%)
Query: 344 VAVQKVQCEN--ETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ EN ++L +LS+ +L + H ++ +L G C G + +++ EY G+
Sbjct: 56 VAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGS 112
Query: 402 LEEHLLKSSE------------QKACLDWYKRLIIAAETASVLAF-----LQFEISPPIF 444
L L +S + + LD + A+ +Q+ +
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLV 172
Query: 445 HHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------K 490
H DL + I + E +K++ FG+ S +Q I V +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 491 TDVYDFGVLLLELIT 505
+DV+ FGVLL E++T
Sbjct: 233 SDVWSFGVLLWEIVT 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 25/168 (14%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSEQKACL 416
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 417 DWYKRLI----IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
D YK + + + V ++F S H DL + I L E VK+ FG+ +
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGL-ARD 193
Query: 473 LGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + A + ++DV+ FGVLL E+ +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 66 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 117
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 176
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 234
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 235 MPDYKPSFPKWARQDFSKVV 254
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 65 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 116
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 233
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 234 MPDYKPSFPKWARQDFSKVV 253
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 68 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 119
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 236
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 237 MPDYKPSFPKWARQDFSKVV 256
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VA++ ++ E + + + +++ + H L +L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY ANG L +L E + + L + + + +L+ S
Sbjct: 69 TKQ---RPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SK 119
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSL------GVGSNSCNNQQAICV------- 488
H DL + +++ VKV+ FG+ L VGS V
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 489 NKTDVYDFGVLLLELIT 505
+K+D++ FGVL+ E+ +
Sbjct: 180 SKSDIWAFGVLMWEIYS 196
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 36/195 (18%)
Query: 344 VAVQKVQCEN--ETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ EN ++L +LS+ +L + H ++ +L G C G + +++ EY G+
Sbjct: 56 VAVKMLK-ENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL--LLIVEYAKYGS 112
Query: 402 LEEHLLKSSE------------QKACLDWYKRLIIAAETASVLAF-----LQFEISPPIF 444
L L +S + + LD + A+ +Q+ +
Sbjct: 113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV 172
Query: 445 HHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------K 490
H DL + I + E +K++ FG+ S +Q I V +
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 491 TDVYDFGVLLLELIT 505
+DV+ FGVLL E++T
Sbjct: 233 SDVWSFGVLLWEIVT 247
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 65 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 116
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 233
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 234 MPDYKPSFPKWARQDFSKVV 253
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 22/154 (14%)
Query: 341 GSHVAVQKVQCENETD--LIQVLSQVELLSAIMHRNLARLLGCCIDS--------GFINP 390
G VA++KV ENE + I L ++++L + H N+ L+ C G I
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 391 IVVY-EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
+ + E+ G L L+K + L KR++ +L L + I H D+K
Sbjct: 103 VFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM-----QMLLNGLYYIHRNKILHRDMK 152
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ 483
+ + + D +K+A FG+ + + + NS N+
Sbjct: 153 AANVLITRDGVLKLADFGL-ARAFSLAKNSQPNR 185
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 64 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 115
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 232
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 233 MPDYKPSFPKWARQDFSKVV 252
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
++L + G + G VA++ ++ E + + + +++ + H L +L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 383 IDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISP 441
PI ++ EY ANG L +L E + + L + + + +L+ S
Sbjct: 74 TKQ---RPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLE---SK 124
Query: 442 PIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQ-------------AICV 488
H DL + +++ VKV+ FG+ L S + +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 489 NKTDVYDFGVLLLELIT 505
+K+D++ FGVL+ E+ +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 22/154 (14%)
Query: 341 GSHVAVQKVQCENETD--LIQVLSQVELLSAIMHRNLARLLGCCIDS--------GFINP 390
G VA++KV ENE + I L ++++L + H N+ L+ C G I
Sbjct: 42 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101
Query: 391 IVVY-EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
+ + E+ G L L+K + L KR++ +L L + I H D+K
Sbjct: 102 VFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM-----QMLLNGLYYIHRNKILHRDMK 151
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ 483
+ + + D +K+A FG+ + + + NS N+
Sbjct: 152 AANVLITRDGVLKLADFGL-ARAFSLAKNSQPNR 184
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 38/231 (16%)
Query: 346 VQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEH 405
+ K Q + +TD +L +V+LL + H N+ +L D G+ +V E G L +
Sbjct: 83 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDE 140
Query: 406 LLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD---EDYCVK 462
++ + + A VL+ + + I H DLK + L+ +D ++
Sbjct: 141 IISRKR-------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 193
Query: 463 VAGFGIPSTSLGVGSNSCNN-----------QQAICVNKTDVYDFGVLLLELITGC---R 508
+ FG+ ST + K DV+ GV+L L++GC
Sbjct: 194 IIDFGL-STHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
Query: 509 QADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRCLLF 559
A++ + L+K+ GK Y E P +++ E D+ + L +
Sbjct: 253 GANEYDI-LKKVEKGK---------YTFELPQWKKVS-ESAKDLIRKMLTY 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 67 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 118
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 235
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 236 MPDYKPSFPKWARQDFSKVV 255
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 96/237 (40%), Gaps = 36/237 (15%)
Query: 306 LFAYHELEEA--TRGFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQ 363
L Y+EL E T GF + G + A I D + + +DL ++ ++
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---------SDLPRIKTE 58
Query: 364 VELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLI 423
+E L + H+++ +L + I +V EY G L ++++ L + +
Sbjct: 59 IEALKNLRHQHICQLYHVLETANKI--FMVLEYCPGGELFDYIISQDR----LSEEETRV 112
Query: 424 IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPST------------ 471
+ + S +A++ S H DLK + DE + +K+ FG+ +
Sbjct: 113 VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC 169
Query: 472 --SLGVGSNSCNNQQAICVNKTDVYDFGVLLLELITGCRQADQSTVT--LQKIRSGK 524
SL + ++ ++ DV+ G+LL L+ G D V +KI GK
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK 226
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 38/231 (16%)
Query: 346 VQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEH 405
+ K Q + +TD +L +V+LL + H N+ +L D G+ +V E G L +
Sbjct: 82 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFDE 139
Query: 406 LLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD---EDYCVK 462
++ + + A VL+ + + I H DLK + L+ +D ++
Sbjct: 140 IISRKR-------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIR 192
Query: 463 VAGFGIPSTSLGVGSNSCNN-----------QQAICVNKTDVYDFGVLLLELITGC---R 508
+ FG+ ST + K DV+ GV+L L++GC
Sbjct: 193 IIDFGL-STHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
Query: 509 QADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRCLLF 559
A++ + L+K+ GK Y E P +++ E D+ + L +
Sbjct: 252 GANEYDI-LKKVEKGK---------YTFELPQWKKVS-ESAKDLIRKMLTY 291
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 69 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 120
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 237
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 238 MPDYKPSFPKWARQDFSKVV 257
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 66 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 117
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 234
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 235 MPDYKPSFPKWARQDFSKVV 254
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 65 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 116
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 233
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 234 MPDYKPSFPKWARQDFSKVV 253
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 64 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 115
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 232
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 233 MPDYKPSFPKWARQDFSKVV 252
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 69 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 120
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 179
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 237
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 238 MPDYKPSFPKWARQDFSKVV 257
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ LK+ + L +I + +L L
Sbjct: 64 VKLLDVIHTENKL--YLVFEHVHQD------LKTFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 232
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 233 MPDYKPSFPKWARQDFSKVV 252
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 68 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 119
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 236
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 237 MPDYKPSFPKWARQDFSKVV 256
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 67 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 118
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 235
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 236 MPDYKPSFPKWARQDFSKVV 255
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ + LK + L +I + +L L
Sbjct: 67 VKLLDVIHTENKL--YLVFEFLSMD------LKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 235
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 236 MPDYKPSFPKWARQDFSKVV 255
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 39/264 (14%)
Query: 315 ATRGFKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIM 371
+ F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 372 HRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASV 431
H N+ +LL + +V+E+ L + L K + A L +I + +
Sbjct: 61 HPNIVKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQL 112
Query: 432 LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK- 490
L L F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRA 171
Query: 491 -------------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDP 531
D++ G + E++T G + DQ + + G E+V P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWP 229
Query: 532 SL-----YYHEQPIFRREQMEKVA 550
+ Y P + R+ KV
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ + LK + L +I + +L L
Sbjct: 66 VKLLDVIHTENKL--YLVFEFLSMD------LKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 234
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 235 MPDYKPSFPKWARQDFSKVV 254
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 65 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 116
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 233
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 234 MPDYKPSFPKWARQDFSKVV 253
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 66 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 117
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 234
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 235 MPDYKPSFPKWARQDFSKVV 254
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ + LK + L +I + +L L
Sbjct: 68 VKLLDVIHTENKL--YLVFEFLSMD------LKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 236
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 237 MPDYKPSFPKWARQDFSKVV 256
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 67 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 118
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 235
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 236 MPDYKPSFPKWARQDFSKVV 255
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ + LK + L +I + +L L
Sbjct: 68 VKLLDVIHTENKL--YLVFEFLSMD------LKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 236
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 237 MPDYKPSFPKWARQDFSKVV 256
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 66 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 117
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 234
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 235 MPDYKPSFPKWARQDFSKVV 254
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 65 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 116
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 233
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 234 MPDYKPSFPKWARQDFSKVV 253
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 64 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 115
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 232
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 233 MPDYKPSFPKWARQDFSKVV 252
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 65 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 116
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 233
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 234 MPDYKPSFPKWARQDFSKVV 253
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 345 AVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEE 404
+ K Q + +TD +L +V+LL + H N+ +L D G+ +V E G L +
Sbjct: 64 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFD 121
Query: 405 HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD---EDYCV 461
++ + + A VL+ + + I H DLK + L+ +D +
Sbjct: 122 EIISRKR-------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 174
Query: 462 KVAGFGIPSTSLGVGSNSCNNQQAICV----------NKTDVYDFGVLLLELITGC---R 508
++ FG+ + A + K DV+ GV+L L++GC
Sbjct: 175 RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
Query: 509 QADQSTVTLQKIRSGK 524
A++ + L+K+ GK
Sbjct: 235 GANEYDI-LKKVEKGK 249
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 31/188 (16%)
Query: 344 VAVQKVQCENETDLIQVL-SQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ D + L S+++++S + H N+ LLG C G + +V+ EY G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGD 136
Query: 402 LEEHLLKSSE----------QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSC 451
L L + S + L L +++ A +AFL S H D+ +
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAAR 193
Query: 452 YIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTDVYDFG 497
+ L + K+ FG+ + + + V ++DV+ +G
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 498 VLLLELIT 505
+LL E+ +
Sbjct: 254 ILLWEIFS 261
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 64 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 115
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 232
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 233 MPDYKPSFPKWARQDFSKVV 252
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 39/264 (14%)
Query: 315 ATRGFKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIM 371
+ F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 372 HRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASV 431
H N+ +LL + +V+E+ L + L K + A L +I + +
Sbjct: 61 HPNIVKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQL 112
Query: 432 LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK- 490
L L F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRA 171
Query: 491 -------------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDP 531
D++ G + E++T G + DQ + + G E+V P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWP 229
Query: 532 SL-----YYHEQPIFRREQMEKVA 550
+ Y P + R+ KV
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 393 VYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
V EY G L H+ +Q + AAE A L FLQ S I + DLK
Sbjct: 420 VMEYVNGGDLMYHI----QQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDN 472
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFGVLL 500
+ LD + +K+A FG+ ++ G + C I D + FGVLL
Sbjct: 473 VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 501 LELITG 506
E++ G
Sbjct: 533 YEMLAG 538
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ + LK + L +I + +L L
Sbjct: 68 VKLLDVIHTENKL--YLVFEH------VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 236
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 237 MPDYKPSFPKWARQDFSKVV 256
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 25/168 (14%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSEQKACL 416
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 417 DWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
D YK + + V ++F S H DL + I L E VK+ FG+ +
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL-ARD 193
Query: 473 LGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + A + ++DV+ FGVLL E+ +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 28/197 (14%)
Query: 345 AVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEE 404
+ K Q + +TD +L +V+LL + H N+ +L D G+ +V E G L +
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF--YLVGEVYTGGELFD 115
Query: 405 HLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD---EDYCV 461
++ + + A VL+ + + I H DLK + L+ +D +
Sbjct: 116 EIISRKR-------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 168
Query: 462 KVAGFGIPSTSLGVGSNSCNN-----------QQAICVNKTDVYDFGVLLLELITGC--- 507
++ FG+ ST + K DV+ GV+L L++GC
Sbjct: 169 RIIDFGL-STHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPF 227
Query: 508 RQADQSTVTLQKIRSGK 524
A++ + L+K+ GK
Sbjct: 228 NGANEYDI-LKKVEKGK 243
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 324 KLADSKNGSIYAGVIGD-GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
+L D G +Y + G+ A + ++ ++E +L + ++E+L+ H + +LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
G + ++ E+ G ++ +L E L + ++ + L FL S
Sbjct: 86 YHDGKL--WIMIEFCPGGAVDAIML---ELDRGLTEPQIQVVCRQMLEALNFLH---SKR 137
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG--------VGSNSCNNQQAICVN----- 489
I H DLK+ + + + +++A FG+ + +L +G+ + +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 490 ----KTDVYDFGVLLLEL 503
K D++ G+ L+E+
Sbjct: 198 PYDYKADIWSLGITLIEM 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA+ K++ + ET+ + + ++ LL + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 65 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 116
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 233
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 234 MPDYKPSFPKWARQDFSKVV 253
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 39/260 (15%)
Query: 319 FKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIMHRNL 375
F+ +K+ + G +Y A G VA+ K++ + ET+ + + ++ LL + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFL 435
+LL + +V+E+ L + L K + A L +I + +L L
Sbjct: 64 VKLLDVIHTENKL--YLVFEF-----LHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGL 115
Query: 436 QFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK----- 490
F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-ARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 491 ---------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDPSL-- 533
D++ G + E++T G + DQ + + G E+V P +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWPGVTS 232
Query: 534 ---YYHEQPIFRREQMEKVA 550
Y P + R+ KV
Sbjct: 233 MPDYKPSFPKWARQDFSKVV 252
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 40/216 (18%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIM--HRNLARLLG 380
+++ + G ++ G G VAV+ E + + E+ ++ H N+ +
Sbjct: 43 KQIGKGRYGEVWMGK-WRGEKVAVKVFFTTEEASWFR---ETEIYQTVLMRHENILGFIA 98
Query: 381 CCIDS--GFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE 438
I + ++ +Y NG+L ++L + LD L +A + S L L E
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 439 I-----SPPIFHHDLKSCYIFLDEDYCVKVAGFGI--------------PSTSLG----- 474
I P I H DLKS I + ++ +A G+ P+T +G
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 475 ---VGSNSCNNQQAICVNKTDVYDFGVLLLELITGC 507
V S N D+Y FG++L E+ C
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRC 249
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 324 KLADSKNGSIYAGVIGD-GSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCC 382
+L D G +Y + G+ A + ++ ++E +L + ++E+L+ H + +LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 383 IDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPP 442
G + ++ E+ G ++ +L E L + ++ + L FL S
Sbjct: 78 YHDGKL--WIMIEFCPGGAVDAIML---ELDRGLTEPQIQVVCRQMLEALNFLH---SKR 129
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLG--------VGSNSCNNQQAICVN----- 489
I H DLK+ + + + +++A FG+ + +L +G+ + +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 490 ----KTDVYDFGVLLLEL 503
K D++ G+ L+E+
Sbjct: 190 PYDYKADIWSLGITLIEM 207
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 89/229 (38%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTYEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V E NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEXMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 30/209 (14%)
Query: 313 EEATRGFKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQC---ENETDLIQVLSQVELLS 368
++ + F D +++ G++Y A + + VA++K+ ++ ++ +V L
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 369 AIMHRNLARLLGCCIDSGFINPIVVYEY---PANGTLEEHLLKSSEQKACLDWYKRLIIA 425
+ H N + GC + +V EY A+ LE H E + IA
Sbjct: 110 KLRHPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVE----------IA 157
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCN 481
A T L L + S + H D+K+ I L E VK+ FG + + VG+
Sbjct: 158 AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWM 217
Query: 482 NQQAICV-------NKTDVYDFGVLLLEL 503
+ I K DV+ G+ +EL
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 28/171 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQ----K 413
++S++++L I H N+ LLG C G P+ V+ E+ G L +L + K
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 414 ACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP 469
D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL- 194
Query: 470 STSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 393 VYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
V EY G L H+ + K + AAE A L FLQ S I + DLK
Sbjct: 99 VMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDN 151
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFGVLL 500
+ LD + +K+A FG+ ++ G + C I D + FGVLL
Sbjct: 152 VMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 501 LELITG 506
E++ G
Sbjct: 212 YEMLAG 217
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQV-LSQVELLSAIMHRNLA 376
FK +KL + ++Y G+ G +VA+++V+ ++E + ++ L+ + H N+
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 377 RLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRL---IIAAETASVLA 433
RL + +V+E+ ++ L K + + + + L ++ +L
Sbjct: 67 RLYDVIHTENKLT--LVFEF-----MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 434 FLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNKT-- 491
L F I H DLK + +++ +K+ FG+ + + G+ N+ +++ +
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGL-ARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 492 ------------DVYDFGVLLLELITG 506
D++ G +L E+ITG
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 30/209 (14%)
Query: 313 EEATRGFKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQC---ENETDLIQVLSQVELLS 368
++ + F D +++ G++Y A + + VA++K+ ++ ++ +V L
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 369 AIMHRNLARLLGCCIDSGFINPIVVYEY---PANGTLEEHLLKSSEQKACLDWYKRLIIA 425
+ H N + GC + +V EY A+ LE H E + IA
Sbjct: 71 KLRHPNTIQYRGCYLREH--TAWLVMEYCLGSASDLLEVHKKPLQEVE----------IA 118
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----IPSTSLGVGSNSCN 481
A T L L + S + H D+K+ I L E VK+ FG + + VG+
Sbjct: 119 AVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWM 178
Query: 482 NQQAICV-------NKTDVYDFGVLLLEL 503
+ I K DV+ G+ +EL
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 23/132 (17%)
Query: 389 NPIVVYEYPANGTLEEHLLKSSEQKAC--LDWYKRLIIAAETASVLAFLQFEISPPIFHH 446
N V EY G L H+ ++C D + AAE ++ LQF S I +
Sbjct: 93 NLFFVMEYLNGGDLMYHI------QSCHKFDLSRATFYAAE---IILGLQFLHSKGIVYR 143
Query: 447 DLKSCYIFLDEDYCVKVAGFGI-PSTSLGVGSNS--CNNQQAICV---------NKTDVY 494
DLK I LD+D +K+A FG+ LG + C I + D +
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 495 DFGVLLLELITG 506
FGVLL E++ G
Sbjct: 204 SFGVLLYEMLIG 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 23/132 (17%)
Query: 389 NPIVVYEYPANGTLEEHLLKSSEQKAC--LDWYKRLIIAAETASVLAFLQFEISPPIFHH 446
N V EY G L H+ ++C D + AAE ++ LQF S I +
Sbjct: 92 NLFFVMEYLNGGDLMYHI------QSCHKFDLSRATFYAAE---IILGLQFLHSKGIVYR 142
Query: 447 DLKSCYIFLDEDYCVKVAGFGI-PSTSLGVGSNS--CNNQQAICV---------NKTDVY 494
DLK I LD+D +K+A FG+ LG + C I + D +
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWW 202
Query: 495 DFGVLLLELITG 506
FGVLL E++ G
Sbjct: 203 SFGVLLYEMLIG 214
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 106/264 (40%), Gaps = 39/264 (14%)
Query: 315 ATRGFKDSQKLADSKNGSIY-AGVIGDGSHVAVQKVQCENETDLIQ--VLSQVELLSAIM 371
+ F+ +K+ + G +Y A G VA++K++ + ET+ + + ++ LL +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 372 HRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASV 431
H N+ +LL + +V+E+ LK + L +I + +
Sbjct: 61 HPNIVKLLDVIHTENKL--YLVFEFLHQD------LKDFMDASALTGIPLPLIKSYLFQL 112
Query: 432 LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVNK- 490
L L F S + H DLK + ++ + +K+A FG+ + + GV + ++ +
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL-ARAFGVPVRTYXHEVVTLWYRA 171
Query: 491 -------------TDVYDFGVLLLELIT------GCRQADQSTVTLQKIRSGKIQEIVDP 531
D++ G + E++T G + DQ + + G E+V P
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWP 229
Query: 532 SL-----YYHEQPIFRREQMEKVA 550
+ Y P + R+ KV
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVV 253
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 341 GSHVAVQKVQCENETD--LIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI------- 391
G VA++KV ENE + I L ++++L + H N+ L+ C +P
Sbjct: 43 GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA--SPYNRCKASI 100
Query: 392 -VVY---EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHD 447
+V+ E+ G L L+K + L KR++ +L L + I H D
Sbjct: 101 YLVFDFCEHDLAGLLSNVLVKFT-----LSEIKRVM-----QMLLNGLYYIHRNKILHRD 150
Query: 448 LKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ 483
+K+ + + D +K+A FG+ + + + NS N+
Sbjct: 151 MKAANVLITRDGVLKLADFGL-ARAFSLAKNSQPNR 185
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 42/234 (17%)
Query: 340 DGSHVAVQKVQCEN-ETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI-----VV 393
D + A+++++ N E +V+ +V+ L+ + H + R ++ + V
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 394 YEYPANGTLEEHLLKSSEQKAC-LDWYKR---LIIAAETASVLAFLQFEISPPIFHHDLK 449
Y Y + LK C ++ +R L I + A + FL S + H DLK
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLK 145
Query: 450 SCYIFLDEDYCVKVAGFGI---------------PSTSLG-----VGSNSCNNQQAICVN 489
IF D VKV FG+ P + VG+ + + I N
Sbjct: 146 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN 205
Query: 490 ----KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQP 539
K D++ G++L EL+ + TL +R+ K P L+ + P
Sbjct: 206 SYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKF-----PPLFTQKYP 254
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIYAGVIGD------GSHVAVQKV-QCENETDLI 358
+F E E + ++L G +Y G D + VAV+ V + + + I
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +VV E A+G L+ +L +++
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 120
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
+ + + +AAE A +A+L + H DL + + D+ VK+ FG+
Sbjct: 121 RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 473 LGVGSNSCNNQQAICV--------------NKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
+ + V +D++ FGV+L E+ + Q Q Q
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 237
Query: 519 KIR 521
++
Sbjct: 238 VLK 240
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 32/243 (13%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIYAGVIGD------GSHVAVQKV-QCENETDLI 358
+F E E + ++L G +Y G D + VAV+ V + + + I
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +VV E A+G L+ +L +++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
+ + + +AAE A +A+L + H DL + + D+ VK+ FG+
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 473 LGVGSNSCNNQQAICV--------------NKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
+ + V +D++ FGV+L E+ + Q Q Q
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 519 KIR 521
++
Sbjct: 241 VLK 243
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 29/242 (11%)
Query: 331 GSIYAGVIGDGSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFIN 389
G +Y + S +A KV ++E +L + ++++L++ H N+ +LL N
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--N 81
Query: 390 PIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
++ E+ A G ++ +L E + L + ++ +T L +L I H DLK
Sbjct: 82 LWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLK 135
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLG---------VGSNSCNNQQAICVN---------KT 491
+ I D +K+A FG+ + + +G+ + + K
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 492 DVYDFGVLLLEL--ITGCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRREQMEKV 549
DV+ G+ L+E+ I L KI + + PS + F ++ +EK
Sbjct: 196 DVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN 255
Query: 550 AD 551
D
Sbjct: 256 VD 257
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 45/301 (14%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIYAGVIGD------GSHVAVQKV-QCENETDLI 358
+F E E + ++L G +Y G D + VAV+ V + + + I
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +VV E A+G L+ +L +++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG----I 468
+ + + +AAE A +A+L + H DL + + D+ VK+ FG I
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 469 PSTS---------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
T+ L V + + + + +D++ FGV+L E+ + Q Q Q
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 519 KIRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRCLLFG---RDGKIGMIDIAKELV 575
++ ++D Y +QP E+V D+ C F R + ++++ K+ +
Sbjct: 241 VLKF-----VMDGG--YLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Query: 576 H 576
H
Sbjct: 291 H 291
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 361 LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYK 420
L + ++ H N+ RL G S + ++V E NG+L+ L K Q +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEXMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 421 RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP----------- 469
L A L+ + + H DL + I ++ + KV+ FG+
Sbjct: 123 MLRGIASGMKYLSDMGY------VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 470 STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 119/287 (41%), Gaps = 47/287 (16%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAVQ-KVQCENETD----LIQVLSQVELLSAIMH 372
K + L G++Y G+ + +G V + ++ NET ++ + + +++++ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
+L RLLG C+ +V + +G L E++ + + + L+W + A
Sbjct: 100 PHLVRLLGVCLSPTI---QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 150
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGV--------GSNSCN 481
+ +L+ + H DL + + + VK+ FG+ G G
Sbjct: 151 KGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 207
Query: 482 NQQAICV------NKTDVYDFGVLLLELIT-GCRQADQSTVTLQKIRSGKIQEIVDPSLY 534
C+ +++DV+ +GV + EL+T G + D I + +I ++++
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-------GIPTREIPDLLEKGER 260
Query: 535 YHEQPIFRREQMEKVADIATRCLLFGRDGKIGMIDIAKELVHIAKES 581
+ PI + V + +C + D + ++A E +A++
Sbjct: 261 LPQPPICTID----VYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 303
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 123/301 (40%), Gaps = 45/301 (14%)
Query: 306 LFAYHELEEATRGFKDSQKLADSKNGSIYAGVIGD------GSHVAVQKV-QCENETDLI 358
+F E E + ++L G +Y G D + VAV+ V + + + I
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
+ L++ ++ ++ RLLG S +VV E A+G L+ +L +++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS 472
+ + + +AAE A +A+L + H DL + + D+ VK+ FG+
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 473 -------------LGVGSNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQ 518
L V + + + + +D++ FGV+L E+ + Q Q Q
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
Query: 519 KIRSGKIQEIVDPSLYYHEQPIFRREQMEKVADIATRCLLFG---RDGKIGMIDIAKELV 575
++ ++D Y +QP E+V D+ C F R + ++++ K+ +
Sbjct: 241 VLKF-----VMDGG--YLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Query: 576 H 576
H
Sbjct: 291 H 291
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 363 QVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSS----EQKACLDW 418
+V +L+ + H N+ + ++G + +V +Y G L + + ++ LDW
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSL--YIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 419 YKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS-------- 470
+ ++ +A L+ I H D+KS IFL +D V++ FGI
Sbjct: 131 FVQICLA---------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181
Query: 471 ------TSLGVGSNSCNNQQAICVNKTDVYDFGVLLLELIT 505
T + C N+ NK+D++ G +L EL T
Sbjct: 182 ARACIGTPYYLSPEICENKP--YNNKSDIWALGCVLYELCT 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 42/279 (15%)
Query: 323 QKLADSKNGSIYAGVIGD------GSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNL 375
++L G +Y G D + VAV+ V + + + I+ L++ ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQKACLDWYKRLIIAAETA 429
RLLG S +VV E A+G L+ +L +++ + + + +AAE A
Sbjct: 83 VRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICV- 488
+A+L + H DL + + D+ VK+ FG+ + + V
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 489 -------------NKTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGKIQEIVDPSLYY 535
+D++ FGV+L E+ + Q Q Q ++ ++D Y
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF-----VMDGG--Y 250
Query: 536 HEQPIFRREQMEKVADIATRCLLFGRDGKIGMIDIAKEL 574
+QP E+V D+ C F + + ++I L
Sbjct: 251 LDQP---DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 42/229 (18%)
Query: 310 HELEEATRGFKDSQKLADSKNGSIYAGVIGDGS-----------------HVAVQKVQC- 351
H E+ T+ + K D+ N SI V+G G VA++ ++
Sbjct: 26 HTFEDPTQTVHEFAKELDATNISI-DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 352 ENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSE 411
E L + ++ H N+ RL G S + ++V E NG+L+ L K
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV--MIVTEXMENGSLDSFLRKHDA 142
Query: 412 QKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP-- 469
Q + + + + + +++ H DL + I ++ + KV+ FG+
Sbjct: 143 Q------FTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 470 ---------STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G + +AI K +DV+ +G++L E+++
Sbjct: 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 23/159 (14%)
Query: 361 LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYK 420
LS+ ++ H N+ RL G ++V EY NG+L+ L Q +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLA--MIVTEYMENGSLDTFLRTHDGQFTIMQLVG 155
Query: 421 RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP----------- 469
L L+ L + H DL + + +D + KV+ FG+
Sbjct: 156 MLRGVGAGMRYLSDLGY------VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 470 STSLGVGSNSCNNQQAICV----NKTDVYDFGVLLLELI 504
+T+ G +AI + +DV+ FGV++ E++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 122/287 (42%), Gaps = 47/287 (16%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAVQ-KVQCENETD----LIQVLSQVELLSAIMH 372
K + L G++Y G+ + +G V + ++ NET ++ + + +++++ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
+L RLLG C+ +V + +G L E++ + + + L+W + A
Sbjct: 77 PHLVRLLGVCLSPTI---QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIA 127
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS--NSCNNQQAI- 486
+ +L+ + H DL + + + VK+ FG+ G N+ + I
Sbjct: 128 KGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK 184
Query: 487 -----CV------NKTDVYDFGVLLLELIT-GCRQADQSTVTLQKIRSGKIQEIVDPSLY 534
C+ +++DV+ +GV + EL+T G + D I + +I ++++
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD-------GIPTREIPDLLEKGER 237
Query: 535 YHEQPIFRREQMEKVADIATRCLLFGRDGKIGMIDIAKELVHIAKES 581
+ PI + V + +C + D + ++A E +A++
Sbjct: 238 LPQPPICTID----VYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 23/159 (14%)
Query: 361 LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYK 420
LS+ ++ H N+ RL G ++V EY NG+L+ L Q +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLA--MIVTEYMENGSLDTFLRTHDGQFTIMQLVG 155
Query: 421 RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP----------- 469
L L+ L + H DL + + +D + KV+ FG+
Sbjct: 156 MLRGVGAGMRYLSDLGY------VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 470 STSLGVGSNSCNNQQAICV----NKTDVYDFGVLLLELI 504
+T+ G +AI + +DV+ FGV++ E++
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAIC---VNK------ 490
I + DLK I LDE+ +K+ FG+ S+ + C + + VN+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS 206
Query: 491 TDVYDFGVLLLELITGC 507
D + FGVL+ E++TG
Sbjct: 207 ADWWSFGVLMFEMLTGT 223
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 32/226 (14%)
Query: 323 QKLADSKNGSIYAGVIGD------GSHVAVQKV-QCENETDLIQVLSQVELLSAIMHRNL 375
++L G +Y G D + VAV+ V + + + I+ L++ ++ ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 376 ARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQKACLDWYKRLIIAAETA 429
RLLG S +VV E A+G L+ +L +++ + + + +AAE A
Sbjct: 82 VRLLGVV--SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPST-------------SLGVG 476
+A+L + H DL + + D+ VK+ FG+ L V
Sbjct: 140 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 477 SNSCNN-QQAICVNKTDVYDFGVLLLELITGCRQADQSTVTLQKIR 521
+ + + + +D++ FGV+L E+ + Q Q Q ++
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 242
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 27/170 (15%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACL- 416
++S++++L I H N+ LLG C G P+ V+ E+ G L +L +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 417 --DWYKRLI----IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS 470
D YK + + + V ++F S H DL + I L E VK+ FG+ +
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL-A 195
Query: 471 TSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + A + ++DV+ FGVLL E+ +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNN 482
AE A L L S I + DLK I LDE+ +K+ FG+ S+ + C
Sbjct: 134 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT 190
Query: 483 QQAIC---VNK------TDVYDFGVLLLELITGC 507
+ + VN+ D + FGVL+ E++TG
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 224
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 197 -ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNN 482
AE A L L S I + DLK I LDE+ +K+ FG+ S+ + C
Sbjct: 133 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT 189
Query: 483 QQAIC---VNK------TDVYDFGVLLLELITGC 507
+ + VN+ D + FGVL+ E++TG
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 186 -ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 13/169 (7%)
Query: 317 RGFKDSQKLADSKNGSIYAGV-IGDGSHVAVQKV--QCENETDLIQVLSQVELLSAIM-H 372
R ++ +KL G ++ + G VAV+K+ +N TD + ++ +L+ + H
Sbjct: 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH 68
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVL 432
N+ LL + +V++Y E L + + L+ + + + V+
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDY------METDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 433 AFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCN 481
+L S + H D+K I L+ + VKVA FG+ + + + + N
Sbjct: 123 KYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNN 168
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 195 -ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 27/192 (14%)
Query: 346 VQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEH 405
++K E + V + +++S + H +L C D + Y NG L ++
Sbjct: 70 LEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKL--YFGLSYAKNGELLKY 127
Query: 406 LLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVA 464
+ K S + C +Y TA +++ L++ I H DLK I L+ED +++
Sbjct: 128 IRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT 179
Query: 465 GFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLLLELITGCR-- 508
FG P + + Q + +D++ G ++ +L+ G
Sbjct: 180 DFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
Query: 509 QADQSTVTLQKI 520
+A + QKI
Sbjct: 240 RAGNEYLIFQKI 251
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 186 -ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGI---------PSTSLG-VGSNS---------C 480
P I H D KS + L D +A FG+ P + G VG+
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGA 200
Query: 481 NNQQAICVNKTDVYDFGVLLLELITGCRQAD 511
N Q + D+Y G++L EL++ C+ AD
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 331 GSIYAGVI-GDGSHVAVQKVQCENETDL-IQVLSQVELLSAIMHRNLARLLGCCIDSGFI 388
G +++G + D + VAV+ + DL + L + +L H N+ RL+G C
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--- 184
Query: 389 NPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHD 447
PI +V E G L + A L L + + A+ + +L+ S H D
Sbjct: 185 QPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 448 LKSCYIFLDEDYCVKVAGFGIPSTSL-GVGSNSCNNQQAIC-------------VNKTDV 493
L + + E +K++ FG+ GV + S +Q +++DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 494 YDFGVLLLE 502
+ FG+LL E
Sbjct: 299 WSFGILLWE 307
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 424 IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG--------IPSTSLGV 475
IA +VL L + + + H D+KS I L D VK++ FG +P V
Sbjct: 143 IATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV 202
Query: 476 GSNSCNNQQAIC----VNKTDVYDFGVLLLELITG 506
G+ + I + D++ G++++E++ G
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 87/203 (42%), Gaps = 22/203 (10%)
Query: 319 FKDSQKLADSKNGSIYAGVIG-DGSHVAVQKVQCENETDLI--QVLSQVELLSAIMHRNL 375
++D Q + G++ + V G G+ VA++K+ +++L + ++ LL + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 376 ARLLGCCIDSGFINPIVVYE--YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLA 433
LL ++ + P GT L+K +K D + L+ +L
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVY-----QMLK 139
Query: 434 FLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP----STSLGVGSNSCNNQQAICVN 489
L++ + I H DLK + ++ED +K+ FG+ S G + +N
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILN 199
Query: 490 ------KTDVYDFGVLLLELITG 506
D++ G ++ E+ITG
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITG 222
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 39/193 (20%)
Query: 344 VAVQKVQCENETDLIQVL-SQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ D + L S+++++S + H N+ LLG C G + +V+ EY G
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGD 136
Query: 402 LEEHLLKS---------------SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHH 446
L L + EQ + D L +++ A +AFL S H
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD---LLHFSSQVAQGMAFLA---SKNCIHR 190
Query: 447 DLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN--------------KTD 492
D+ + + L + K+ FG+ + + + V ++D
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 250
Query: 493 VYDFGVLLLELIT 505
V+ +G+LL E+ +
Sbjct: 251 VWSYGILLWEIFS 263
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 399 NGTLEEHLLKSS--EQKACLDWYKRLIIAAE--------TASVLAFLQFEI-----SPPI 443
NGT + L S E + D+ R + E TAS LA L EI P I
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 130
Query: 444 FHHDLKSCYIFLDEDYCVKVAGFGI--------------PSTSLG--------VGSNSCN 481
H DLKS I + ++ +A G+ P+ +G V +S N
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 190
Query: 482 NQQAICVNKTDVYDFGVLLLELITGC 507
+ + D+Y G++ E+ C
Sbjct: 191 MKHFESFKRADIYAMGLVFWEIARRC 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 399 NGTLEEHLLKSS--EQKACLDWYKRLIIAAE--------TASVLAFLQFEI-----SPPI 443
NGT + L S E + D+ R + E TAS LA L EI P I
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 155
Query: 444 FHHDLKSCYIFLDEDYCVKVAGFGI--------------PSTSLG--------VGSNSCN 481
H DLKS I + ++ +A G+ P+ +G V +S N
Sbjct: 156 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 215
Query: 482 NQQAICVNKTDVYDFGVLLLELITGC 507
+ + D+Y G++ E+ C
Sbjct: 216 MKHFESFKRADIYAMGLVFWEIARRC 241
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 399 NGTLEEHLLKSS--EQKACLDWYKRLIIAAE--------TASVLAFLQFEI-----SPPI 443
NGT + L S E + D+ R + E TAS LA L EI P I
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 135
Query: 444 FHHDLKSCYIFLDEDYCVKVAGFGI--------------PSTSLG--------VGSNSCN 481
H DLKS I + ++ +A G+ P+ +G V +S N
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 195
Query: 482 NQQAICVNKTDVYDFGVLLLELITGC 507
+ + D+Y G++ E+ C
Sbjct: 196 MKHFESFKRADIYAMGLVFWEIARRC 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 399 NGTLEEHLLKSS--EQKACLDWYKRLIIAAE--------TASVLAFLQFEI-----SPPI 443
NGT + L S E + D+ R + E TAS LA L EI P I
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 132
Query: 444 FHHDLKSCYIFLDEDYCVKVAGFGI--------------PSTSLG--------VGSNSCN 481
H DLKS I + ++ +A G+ P+ +G V +S N
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 192
Query: 482 NQQAICVNKTDVYDFGVLLLELITGC 507
+ + D+Y G++ E+ C
Sbjct: 193 MKHFESFKRADIYAMGLVFWEIARRC 218
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 195 -ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 399 NGTLEEHLLKSS--EQKACLDWYKRLIIAAE--------TASVLAFLQFEI-----SPPI 443
NGT + L S E + D+ R + E TAS LA L EI P I
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 168
Query: 444 FHHDLKSCYIFLDEDYCVKVAGFGI--------------PSTSLG--------VGSNSCN 481
H DLKS I + ++ +A G+ P+ +G V +S N
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 228
Query: 482 NQQAICVNKTDVYDFGVLLLELITGC 507
+ + D+Y G++ E+ C
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRC 254
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 55/146 (37%), Gaps = 37/146 (25%)
Query: 399 NGTLEEHLLKSS--EQKACLDWYKRLIIAAE--------TASVLAFLQFEI-----SPPI 443
NGT + L S E + D+ R + E TAS LA L EI P I
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 444 FHHDLKSCYIFLDEDYCVKVAGFGI--------------PSTSLG--------VGSNSCN 481
H DLKS I + ++ +A G+ P+ +G V +S N
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 189
Query: 482 NQQAICVNKTDVYDFGVLLLELITGC 507
+ + D+Y G++ E+ C
Sbjct: 190 MKHFESFKRADIYAMGLVFWEIARRC 215
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 361 LSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYK 420
L + ++ H N+ L G S + ++V EY NG+L+ L K+ Q +
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPV--MIVTEYMENGSLDTFLKKNDGQFTVIQ--- 125
Query: 421 RLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIP----------- 469
+ + A +++ H DL + I ++ + KV+ FG+
Sbjct: 126 ---LVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 182
Query: 470 STSLGVGSNSCNNQQAICVNK----TDVYDFGVLLLELIT 505
+T G +AI K +DV+ +G+++ E+++
Sbjct: 183 TTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 40/197 (20%)
Query: 344 VAVQKVQCENETDLIQVL-SQVELLSAI-MHRNLARLLGCCIDSGFINPIVVYEYPANGT 401
VAV+ ++ D + L S+++++S + H N+ LLG C G + +V+ EY G
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV--LVITEYCCYGD 121
Query: 402 LEEHLLKSSEQKA-------------------CLDWYKRLIIAAETASVLAFLQFEISPP 442
L L + +E L+ L +++ A +AFL S
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKN 178
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
H D+ + + L + K+ FG+ + + + V
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 238
Query: 490 -KTDVYDFGVLLLELIT 505
++DV+ +G+LL E+ +
Sbjct: 239 VQSDVWSYGILLWEIFS 255
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 26/189 (13%)
Query: 331 GSIYAGVI-GDGSHVAVQKVQCENETDL-IQVLSQVELLSAIMHRNLARLLGCCIDSGFI 388
G +++G + D + VAV+ + DL + L + +L H N+ RL+G C
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--- 184
Query: 389 NPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHD 447
PI +V E G L + A L L + + A+ + +L+ S H D
Sbjct: 185 QPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 448 LKSCYIFLDEDYCVKVAGFGIPSTSL-GVGSNSCNNQQAIC-------------VNKTDV 493
L + + E +K++ FG+ GV + S +Q +++DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 494 YDFGVLLLE 502
+ FG+LL E
Sbjct: 299 WSFGILLWE 307
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 195 -ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 186 -ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 232 -ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 29/172 (16%)
Query: 360 VLSQVELLSAIMHR-NLARLLGCCIDSGFINPI-VVYEYPANGTLEEHLL-KSSE----Q 412
++S++++L I H N+ LLG C G P+ V+ E+ G L +L K +E +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPG--GPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 413 KACLDWYKRLIIAAE----TASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
A D YK + + V ++F S H DL + I L E VK+ FG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 469 PSTSLGVGSNSCNNQQA---------------ICVNKTDVYDFGVLLLELIT 505
+ + + A + ++DV+ FGVLL E+ +
Sbjct: 186 -ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 128/300 (42%), Gaps = 48/300 (16%)
Query: 331 GSIYAGV-IGDGSHVAVQ---KVQCENETDLI--QVLSQVELLSAIMHRNLARLLGCCID 384
G++Y G+ I DG +V + KV EN + ++L + +++ + ++RLLG C+
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 385 SGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIF 444
S +V + G L +H+ ++ + D + A+ S L ++ +
Sbjct: 91 STV---QLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR------LV 141
Query: 445 HHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ-----------QAIC----VN 489
H DL + + + VK+ FG+ + L + + ++I +
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGL-ARLLDIDETEYHADGGKVPIKWMALESILRRRFTH 200
Query: 490 KTDVYDFGVLLLELIT-GCRQADQSTVTLQKIRSGKIQEIVDPSLYYHEQPIFRREQMEK 548
++DV+ +GV + EL+T G + D I + +I ++++ + PI +
Sbjct: 201 QSDVWSYGVTVWELMTFGAKPYD-------GIPAREIPDLLEKGERLPQPPICTID---- 249
Query: 549 VADIATRCLLFGRDGKIGMIDIAKELVHIAKES----IDEGSKRGPPASALEETFSNSSL 604
V I +C + + + ++ E +A++ + + G PAS L+ TF S L
Sbjct: 250 VYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNEDLG-PASPLDSTFYRSLL 308
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 363 QVELLSAIMHRNLARLLGC-----CIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLD 417
+V L + H N+ + +G +D ++ ++ + G+L + L + +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVD---VDLWLITAFHEKGSLSDFL-----KANVVS 119
Query: 418 WYKRLIIAAETASVLAFLQFEI-------SPPIFHHDLKSCYIFLDEDYCVKVAGFGIP- 469
W + IA A LA+L +I P I H D+KS + L + +A FG+
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
Query: 470 ---------STSLGVGS---------NSCNNQQAICVNKTDVYDFGVLLLELITGCRQAD 511
T VG+ N Q + D+Y G++L EL + C AD
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
I H D+K I + VKV FGI + ++ NS A+
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGI-ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 490 ---KTDVYDFGVLLLELITG 506
++DVY G +L E++TG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
I H D+K I + VKV FGI + ++ NS A+
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGI-ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 490 ---KTDVYDFGVLLLELITG 506
++DVY G +L E++TG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 114 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 165
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + ++ Q + +D++ G ++
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 226 YQLVAGLPPFRAGNEYLIFQKI 247
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
I H D+K I + VKV FGI + ++ NS A+
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGI-ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 490 ---KTDVYDFGVLLLELITG 506
++DVY G +L E++TG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
I H D+K I + VKV FGI + ++ NS A+
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGI-ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 490 ---KTDVYDFGVLLLELITG 506
++DVY G +L E++TG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
I H D+K I + VKV FGI + ++ NS A+
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGI-ARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS 195
Query: 490 ---KTDVYDFGVLLLELITG 506
++DVY G +L E++TG
Sbjct: 196 VDARSDVYSLGCVLYEVLTG 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 70/184 (38%), Gaps = 27/184 (14%)
Query: 339 GDGSHVAVQKVQCENETDLIQ-VLSQVELLSAIMHRNLARLLGCCIDSGFINP---IVVY 394
GD V V K + D ++ +++ +LS + L CC F P V
Sbjct: 48 GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC----FQTPDRLFFVM 103
Query: 395 EYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
E+ G L H+ KS D + AAE S L FL I + DLK +
Sbjct: 104 EFVNGGDLMFHIQKSRR----FDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVL 156
Query: 455 LDEDYCVKVAGFGIPSTSLGVGSNSCNN------------QQAICVNKTDVYDFGVLLLE 502
LD + K+A FG+ + G + Q+ + D + GVLL E
Sbjct: 157 LDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216
Query: 503 LITG 506
++ G
Sbjct: 217 MLCG 220
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKI 246
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 116 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 167
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 168 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 227
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 228 YQLVAGLPPFRAGNEYLIFQKI 249
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQQAICVN------------- 489
I H D+K I + VKV FGI + ++ NS A+
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGI-ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 212
Query: 490 ---KTDVYDFGVLLLELITG 506
++DVY G +L E++TG
Sbjct: 213 VDARSDVYSLGCVLYEVLTG 232
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 41/229 (17%)
Query: 302 CRTRLFAY-HELEEATRGFKDSQKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQ 359
C + L Y +E +E D L G +YAG + + +A++++ E ++ Q
Sbjct: 10 CESDLLEYDYEYDENG----DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQ 64
Query: 360 VL-SQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQ 412
L ++ L + H+N+ + LG ++GFI + E G+L L LK +EQ
Sbjct: 65 PLHEEIALHKHLKHKNIVQYLGSFSENGFIK--IFMEQVPGGSLSALLRSKWGPLKDNEQ 122
Query: 413 KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE-DYCVKVAGFGIPST 471
I T +L L++ I H D+K + ++ +K++ FG
Sbjct: 123 ----------TIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172
Query: 472 SLGVG------SNSCNNQQAICVNK--------TDVYDFGVLLLELITG 506
G+ + + ++K D++ G ++E+ TG
Sbjct: 173 LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 294 STISFRKACRTRLFAYHE---LEEATRGFKDSQKLADSKNGSIYAGVIGD-GSHVAVQKV 349
T+ R R +L E ++ F +KL + GS+Y + + G VA+++V
Sbjct: 3 ETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62
Query: 350 QCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKS 409
E +DL +++ ++ ++ ++ + G + + +V EY G++ + +++
Sbjct: 63 PVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDL--WIVMEYCGAGSVSD-IIRL 117
Query: 410 SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ D + I T L +L F H D+K+ I L+ + K+A FG+
Sbjct: 118 RNKTLTED--EIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGV 171
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 110 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 161
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + ++ Q + +D++ G ++
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 222 YQLVAGLPPFRAGNEYLIFQKI 243
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 114 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 165
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 226 YQLVAGLPPFRAGNEYLIFQKI 247
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 113 YAKNGCLLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + ++ Q + +D++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCII 224
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKI 246
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 162
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKI 244
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 162
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKI 244
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKI 246
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 162
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKI 244
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 225 YQLVAGLPPFRAGNEYLIFQKI 246
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 23/127 (18%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCII 224
Query: 501 LELITGC 507
+L+ G
Sbjct: 225 YQLVAGL 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 89 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 140
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAICV---------NKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 141 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 200
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 201 YQLVAGLPPFRAGNEYLIFQKI 222
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 88 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 139
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 140 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 199
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 200 YQLVAGLPPFRAGNEYLIFQKI 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 111 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 162
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKI 244
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 424 IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCN 481
IA +L L + S H D+K+ + L E VK+A FG+ T + N+
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 181
Query: 482 N----------QQAICVNKTDVYDFGVLLLELITG 506
QQ+ +K D++ G+ +EL G
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 90 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 141
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAICV---------NKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 142 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 201
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 202 YQLVAGLPPFRAGNEYLIFQKI 223
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAIC---VNK------ 490
I + DLK I LDE+ +K+ FG+ ++ + C + + VN+
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHS 210
Query: 491 TDVYDFGVLLLELITGC 507
D + +GVL+ E++TG
Sbjct: 211 ADWWSYGVLMFEMLTGS 227
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 362 SQVELLSAIMHRNLARLLGCCIDS--GFINPIVVYEYPANGTLEEHL--LKSSEQKACLD 417
+ E L + H N+ R + G ++V E +GTL+ +L K + K
Sbjct: 74 EEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRS 133
Query: 418 WYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
W ++++ L FL +PPI H DLK IF+
Sbjct: 134 WCRQILKG------LQFLHTR-TPPIIHRDLKCDNIFI 164
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 95 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 146
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 147 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 206
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 207 YQLVAGLPPFRAGNEYLIFQKI 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 36/209 (17%)
Query: 321 DSQKLADSKNGSIYAGV-IGDGSHVAVQKVQCENETDLIQVL-SQVELLSAIMHRNLARL 378
D L G +YAG + + +A++++ E ++ Q L ++ L + H+N+ +
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 379 LGCCIDSGFINPIVVYEYPANGTLEEHL------LKSSEQKACLDWYKRLIIAAETASVL 432
LG ++GFI + E G+L L LK +EQ I T +L
Sbjct: 71 LGSFSENGFIK--IFMEQVPGGSLSALLRSKWGPLKDNEQ----------TIGFYTKQIL 118
Query: 433 AFLQFEISPPIFHHDLKSCYIFLDE-DYCVKVAGFGIPSTSLGVG------SNSCNNQQA 485
L++ I H D+K + ++ +K++ FG G+ + +
Sbjct: 119 EGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP 178
Query: 486 ICVNK--------TDVYDFGVLLLELITG 506
++K D++ G ++E+ TG
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATG 207
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 110 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 161
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAI---------CVNKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 222 YQLVAGLPPFRAGNEYLIFQKI 243
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 91 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 142
Query: 455 LDEDYCVKVAGFGI-----PSTSLGVGSNSCNNQQAICV---------NKTDVYDFGVLL 500
L+ED +++ FG P + + Q + +D++ G ++
Sbjct: 143 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 202
Query: 501 LELITGCR--QADQSTVTLQKI 520
+L+ G +A + QKI
Sbjct: 203 YQLVAGLPPFRAGNEYLIFQKI 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ GFG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 396 YPANGTLEEHLLK-SSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIF 454
Y NG L +++ K S + C +Y TA +++ L++ I H DLK I
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTRFY--------TAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 455 LDEDYCVKVAGFG 467
L+ED +++ FG
Sbjct: 165 LNEDMHIQITDFG 177
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 75/194 (38%), Gaps = 35/194 (18%)
Query: 340 DGSHVAVQ----KVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSG----FINPI 391
DGS V V K +D+ + L + + H ++A+L+G + S P+
Sbjct: 48 DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107
Query: 392 VVYEYPANGTLEEHLLKSS--EQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
V+ + +G L LL S E L + + A + +L S H DL
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLA 164
Query: 450 SCYIFLDEDYCVKVAGFG------------------IPSTSLGVGSNSCNNQQAICVNKT 491
+ L ED V VA FG +P L + S + N + +
Sbjct: 165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADN----LYTVHS 220
Query: 492 DVYDFGVLLLELIT 505
DV+ FGV + E++T
Sbjct: 221 DVWAFGVTMWEIMT 234
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 333 IYAGVIGDGSHVAVQKVQ-CENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI 391
IY VA++ + C +++ + L + + H ++ +L+G + NP+
Sbjct: 30 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----NPV 85
Query: 392 -VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKS 450
++ E G L L +K LD ++ A + ++ LA+L+ S H D+ +
Sbjct: 86 WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 139
Query: 451 CYIFLDEDYCVKVAGFGI 468
+ + + CVK+ FG+
Sbjct: 140 RNVLVSSNDCVKLGDFGL 157
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 325 LADSKNGSIYAGVI--GDGSHVAVQKVQCEN-ETDLI--QVLSQVELLSAIMHRNLARLL 379
+ + + G ++ G+ + +AV C+N +D + + L + + H ++ +L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 380 GCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE 438
G + NP+ ++ E G L L +K LD ++ A + ++ LA+L+
Sbjct: 83 GVITE----NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE-- 133
Query: 439 ISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
S H D+ + + + + CVK+ FG+
Sbjct: 134 -SKRFVHRDIAARNVLVSSNDCVKLGDFGL 162
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 333 IYAGVIGDGSHVAVQKVQ-CENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI 391
IY VA++ + C +++ + L + + H ++ +L+G + NP+
Sbjct: 30 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----NPV 85
Query: 392 -VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKS 450
++ E G L L +K LD ++ A + ++ LA+L+ S H D+ +
Sbjct: 86 WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 139
Query: 451 CYIFLDEDYCVKVAGFGI 468
+ + + CVK+ FG+
Sbjct: 140 RNVLVSSNDCVKLGDFGL 157
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIP----STSLGVGSNSCNNQQAICVNK-------- 490
I H D+K I +D + +K+ FGI TSL ++ Q +
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 491 -TDVYDFGVLLLELITG 506
TD+Y G++L E++ G
Sbjct: 192 CTDIYSIGIVLYEMLVG 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 325 LADSKNGSIYAGVI--GDGSHVAVQKVQCEN-ETDLI--QVLSQVELLSAIMHRNLARLL 379
+ + + G ++ G+ + +AV C+N +D + + L + + H ++ +L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 380 GCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE 438
G + NP+ ++ E G L L +K LD ++ A + ++ LA+L+
Sbjct: 106 GVITE----NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE-- 156
Query: 439 ISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
S H D+ + + + + CVK+ FG+
Sbjct: 157 -SKRFVHRDIAARNVLVSSNDCVKLGDFGL 185
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
+V ++ +LS + H N+ ++L + GF +V E +G L ++ LD
Sbjct: 75 KVTLEIAILSRVEHANIIKVLDIFENQGFFQ--LVMEKHGSGL---DLFAFIDRHPRLDE 129
Query: 419 YKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFG 467
I + S + +L+ + I H D+K I + ED+ +K+ FG
Sbjct: 130 PLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 318 GFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLAR 377
GF +++D+ ++AG I S + ++ Q E ++ ++ + ++ H+++
Sbjct: 33 GFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQRE------KMSMEISIHRSLAHQHVVG 85
Query: 378 LLGCCIDSGFINPIVVYEY-PANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQ 436
G D+ F+ VV E LE H + + + +Y R I+ Q
Sbjct: 86 FHGFFEDNDFV--FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG--------CQ 135
Query: 437 FEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ + H DLK +FL+ED VK+ FG+
Sbjct: 136 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 167
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 318 GFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLAR 377
GF +++D+ ++AG I S + ++ Q E ++ ++ + ++ H+++
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQRE------KMSMEISIHRSLAHQHVVG 81
Query: 378 LLGCCIDSGFINPIVVYEY-PANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQ 436
G D+ F+ VV E LE H + + + +Y R I+ Q
Sbjct: 82 FHGFFEDNDFV--FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG--------CQ 131
Query: 437 FEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ + H DLK +FL+ED VK+ FG+
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 318 GFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLAR 377
GF +++D+ ++AG I S + ++ Q E ++ ++ + ++ H+++
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQRE------KMSMEISIHRSLAHQHVVG 81
Query: 378 LLGCCIDSGFINPIVVYEY-PANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQ 436
G D+ F+ VV E LE H + + + +Y R I+ Q
Sbjct: 82 FHGFFEDNDFV--FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG--------CQ 131
Query: 437 FEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ + H DLK +FL+ED VK+ FG+
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSH-VAVQKVQCEN--ETDLIQVLSQVELL---S 368
AT ++ ++ G++Y H VA++ V+ N E I + +V LL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 369 AIMHRNLARLLGCCIDSGF---INPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIA 425
A H N+ RL+ C S I +V+E+ + L +L K+ + K L+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLM-- 118
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
L L F + I H DLK I + VK+A FG+
Sbjct: 119 ---RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 325 LADSKNGSIYAGVI--GDGSHVAVQKVQCEN-ETDLI--QVLSQVELLSAIMHRNLARLL 379
+ + + G ++ G+ + +AV C+N +D + + L + + H ++ +L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 380 GCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE 438
G + NP+ ++ E G L L +K LD ++ A + ++ LA+L+
Sbjct: 81 GVITE----NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE-- 131
Query: 439 ISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
S H D+ + + + + CVK+ FG+
Sbjct: 132 -SKRFVHRDIAARNVLVSSNDCVKLGDFGL 160
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSH-VAVQKVQCEN--ETDLIQVLSQVELL---S 368
AT ++ ++ G++Y H VA++ V+ N E I + +V LL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 369 AIMHRNLARLLGCCIDSGF---INPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIA 425
A H N+ RL+ C S I +V+E+ + L +L K+ + K L+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLM-- 118
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
L L F + I H DLK I + VK+A FG+
Sbjct: 119 ---RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 315 ATRGFKDSQKLADSKNGSIYAGVIGDGSH-VAVQKVQCEN--ETDLIQVLSQVELL---S 368
AT ++ ++ G++Y H VA++ V+ N E I + +V LL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 369 AIMHRNLARLLGCCIDSGF---INPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIA 425
A H N+ RL+ C S I +V+E+ + L +L K+ + K L+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-VDQDLRTYLDKAPPPGLPAETIKDLM-- 118
Query: 426 AETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
L L F + I H DLK I + VK+A FG+
Sbjct: 119 ---RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 325 LADSKNGSIYAGVI--GDGSHVAVQKVQCEN-ETDLI--QVLSQVELLSAIMHRNLARLL 379
+ + + G ++ G+ + +AV C+N +D + + L + + H ++ +L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 380 GCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE 438
G + NP+ ++ E G L L +K LD ++ A + ++ LA+L+
Sbjct: 80 GVITE----NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE-- 130
Query: 439 ISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
S H D+ + + + + CVK+ FG+
Sbjct: 131 -SKRFVHRDIAARNVLVSSNDCVKLGDFGL 159
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 318 GFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLAR 377
GF +++D+ ++AG I S + ++ Q E ++ ++ + ++ H+++
Sbjct: 53 GFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQRE------KMSMEISIHRSLAHQHVVG 105
Query: 378 LLGCCIDSGFINPIVVYEY-PANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQ 436
G D+ F+ VV E LE H + + + +Y R I+ Q
Sbjct: 106 FHGFFEDNDFV--FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG--------CQ 155
Query: 437 FEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ + H DLK +FL+ED VK+ FG+
Sbjct: 156 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 318 GFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLAR 377
GF +++D+ ++AG I S + ++ Q E + ++ + ++ H+++
Sbjct: 51 GFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQREKMS------MEISIHRSLAHQHVVG 103
Query: 378 LLGCCIDSGFINPIVVYEY-PANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQ 436
G D+ F+ VV E LE H + + + +Y R I+ Q
Sbjct: 104 FHGFFEDNDFV--FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG--------CQ 153
Query: 437 FEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ + H DLK +FL+ED VK+ FG+
Sbjct: 154 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 325 LADSKNGSIYAGVI--GDGSHVAVQKVQCEN-ETDLI--QVLSQVELLSAIMHRNLARLL 379
+ + + G ++ G+ + +AV C+N +D + + L + + H ++ +L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 380 GCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE 438
G + NP+ ++ E G L L +K LD ++ A + ++ LA+L+
Sbjct: 78 GVITE----NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE-- 128
Query: 439 ISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
S H D+ + + + + CVK+ FG+
Sbjct: 129 -SKRFVHRDIAARNVLVSSNDCVKLGDFGL 157
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 333 IYAGVIGDGSHVAVQKVQ-CENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI 391
IY VA++ + C +++ + L + + H ++ +L+G + NP+
Sbjct: 410 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----NPV 465
Query: 392 -VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKS 450
++ E G L L +K LD ++ A + ++ LA+L+ S H D+ +
Sbjct: 466 WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 519
Query: 451 CYIFLDEDYCVKVAGFGI 468
+ + + CVK+ FG+
Sbjct: 520 RNVLVSSNDCVKLGDFGL 537
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 325 LADSKNGSIYAGVI--GDGSHVAVQKVQCEN-ETDLI--QVLSQVELLSAIMHRNLARLL 379
+ + + G ++ G+ + +AV C+N +D + + L + + H ++ +L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 380 GCCIDSGFINPI-VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFE 438
G + NP+ ++ E G L L +K LD ++ A + ++ LA+L+
Sbjct: 75 GVITE----NPVWIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLE-- 125
Query: 439 ISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
S H D+ + + + + CVK+ FG+
Sbjct: 126 -SKRFVHRDIAARNVLVSSNDCVKLGDFGL 154
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 110
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 111 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 165
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 318 GFKDSQKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLAR 377
GF +++D+ ++AG I S + ++ Q E + ++ + ++ H+++
Sbjct: 27 GFAKCFEISDADTKEVFAGKIVPKS-LLLKPHQREKMS------MEISIHRSLAHQHVVG 79
Query: 378 LLGCCIDSGFINPIVVYEY-PANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQ 436
G D+ F+ VV E LE H + + + +Y R I+ Q
Sbjct: 80 FHGFFEDNDFV--FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG--------CQ 129
Query: 437 FEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ + H DLK +FL+ED VK+ FG+
Sbjct: 130 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 468
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 469 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 523
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 37/204 (18%)
Query: 331 GSIYAG---VIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGF 387
G +Y G G + + V V + E ++ Q ++ ++ S HRN+A G I
Sbjct: 38 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATYYGAFIKK-- 93
Query: 388 INP-------IVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
NP +V E+ G++ + + + +W IA +L L
Sbjct: 94 -NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAYICREILRGLSHLHQ 147
Query: 441 PPIFHHDLKSCYIFLDEDYCVKVAGFGIPST-SLGVGSNSC----------------NNQ 483
+ H D+K + L E+ VK+ FG+ + VG + N
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 484 QAICVNKTDVYDFGVLLLELITGC 507
A K+D++ G+ +E+ G
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGA 231
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 469
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 470 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 524
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 525 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 126
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 127 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 181
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 126
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 127 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 181
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 104
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 105 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 159
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 345 AVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEE 404
+ K +N+ D +L +VELL + H N+ +L DS + +V E G L +
Sbjct: 54 VINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFD 110
Query: 405 HLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL---DED 458
++K SE A R+I V + + + I H DLK I L ++D
Sbjct: 111 EIIKRKRFSEHDAA-----RII-----KQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
Query: 459 YCVKVAGFGIPS 470
+K+ FG+ +
Sbjct: 161 CDIKIIDFGLST 172
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 204
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 124
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 125 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 179
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 116
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 117 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 171
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 36/211 (17%)
Query: 337 VIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIM-HRNLARLLGCCIDSGFINPIVVYE 395
V G GS A ++VQ E L +V++L + H N+ +L + F +V++
Sbjct: 52 VTGGGSFSA-EEVQELREA----TLKEVDILRKVSGHPNIIQLKDTYETNTFF--FLVFD 104
Query: 396 YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
G L ++L +E+ + R I+ A + A + I H DLK I L
Sbjct: 105 LMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALHKLNI----VHRDLKPENILL 157
Query: 456 DEDYCVKVAGFGIPSTSLGVGSN------------------SCNNQQAICVNKTDVYDFG 497
D+D +K+ FG S L G S N+ + D++ G
Sbjct: 158 DDDMNIKLTDFGF-SCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216
Query: 498 VLLLELITGCRQ--ADQSTVTLQKIRSGKIQ 526
V++ L+ G + + L+ I SG Q
Sbjct: 217 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 106
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 107 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 161
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 36/211 (17%)
Query: 337 VIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIM-HRNLARLLGCCIDSGFINPIVVYE 395
V G GS A ++VQ E L +V++L + H N+ +L + F +V++
Sbjct: 39 VTGGGSFSA-EEVQELREA----TLKEVDILRKVSGHPNIIQLKDTYETNTFF--FLVFD 91
Query: 396 YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
G L ++L +E+ + R I+ A + A + I H DLK I L
Sbjct: 92 LMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALHKLNI----VHRDLKPENILL 144
Query: 456 DEDYCVKVAGFGIPSTSLGVGSN------------------SCNNQQAICVNKTDVYDFG 497
D+D +K+ FG S L G S N+ + D++ G
Sbjct: 145 DDDMNIKLTDFGF-SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 203
Query: 498 VLLLELITGCRQ--ADQSTVTLQKIRSGKIQ 526
V++ L+ G + + L+ I SG Q
Sbjct: 204 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 22/106 (20%)
Query: 420 KRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNS 479
+R++ A V A + + H D+K I LDE +K+ FGI + +
Sbjct: 123 ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV---DDK 179
Query: 480 CNNQQAICVN-------------------KTDVYDFGVLLLELITG 506
++ A C + DV+ G+ L+EL TG
Sbjct: 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 36/211 (17%)
Query: 337 VIGDGSHVAVQKVQCENETDLIQVLSQVELLSAIM-HRNLARLLGCCIDSGFINPIVVYE 395
V G GS A ++VQ E L +V++L + H N+ +L + F +V++
Sbjct: 52 VTGGGSFSA-EEVQELREA----TLKEVDILRKVSGHPNIIQLKDTYETNTFF--FLVFD 104
Query: 396 YPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL 455
G L ++L +E+ + R I+ A + A + I H DLK I L
Sbjct: 105 LMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALHKLNI----VHRDLKPENILL 157
Query: 456 DEDYCVKVAGFGIPSTSLGVGSN------------------SCNNQQAICVNKTDVYDFG 497
D+D +K+ FG S L G S N+ + D++ G
Sbjct: 158 DDDMNIKLTDFGF-SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216
Query: 498 VLLLELITGCRQ--ADQSTVTLQKIRSGKIQ 526
V++ L+ G + + L+ I SG Q
Sbjct: 217 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDW 418
++L++ ++ + + + R++G C ++ +V E G L ++L ++ K
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWM---LVMEMAELGPLNKYLQQNRHVKD---- 110
Query: 419 YKRLIIAAETASV-LAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
K +I S+ + +L+ H DL + + L + K++ FG+ S +L
Sbjct: 111 -KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGL-SKALRADE 165
Query: 478 NSCNNQQ----------AICVN------KTDVYDFGVLLLE 502
N Q C+N K+DV+ FGVL+ E
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 333 IYAGVIGDGSHVAVQKVQ-CENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI 391
IY VA++ + C +++ + L + + H ++ +L+G + NP+
Sbjct: 30 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----NPV 85
Query: 392 -VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKS 450
++ E G L L +K LD ++ A + ++ LA+L+ S H D+ +
Sbjct: 86 WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 139
Query: 451 CYIFLDEDYCVKVAGFGI 468
+ + CVK+ FG+
Sbjct: 140 RNVLVSATDCVKLGDFGL 157
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 333 IYAGVIGDGSHVAVQKVQ-CENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPI 391
IY VA++ + C +++ + L + + H ++ +L+G + NP+
Sbjct: 410 IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----NPV 465
Query: 392 -VVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKS 450
++ E G L L +K LD ++ A + ++ LA+L+ S H D+ +
Sbjct: 466 WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA 519
Query: 451 CYIFLDEDYCVKVAGFGI 468
+ + CVK+ FG+
Sbjct: 520 RNVLVSATDCVKLGDFGL 537
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 345 AVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEE 404
+ K +N+ D +L +VELL + H N+ +L DS + +V E G L +
Sbjct: 54 VINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFD 110
Query: 405 HLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL---DED 458
++K SE A R+I V + + + I H DLK I L ++D
Sbjct: 111 EIIKRKRFSEHDAA-----RII-----KQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
Query: 459 YCVKVAGFGIPS 470
+K+ FG+ +
Sbjct: 161 CDIKIIDFGLST 172
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 345 AVQKVQCENETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEE 404
+ K +N+ D +L +VELL + H N+ +L DS + +V E G L +
Sbjct: 54 VINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYIVGELYTGGELFD 110
Query: 405 HLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFL---DED 458
++K SE A R+I V + + + I H DLK I L ++D
Sbjct: 111 EIIKRKRFSEHDAA-----RII-----KQVFSGITYMHKHNIVHRDLKPENILLESKEKD 160
Query: 459 YCVKVAGFGIPS 470
+K+ FG+ +
Sbjct: 161 CDIKIIDFGLST 172
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 19/126 (15%)
Query: 393 VYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCY 452
V EY G L H+ + + K + + AAE + L FL I + DLK
Sbjct: 98 VMEYVNGGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFFLH---KRGIIYRDLKLDN 150
Query: 453 IFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFGVLL 500
+ LD + +K+A FG+ + G + C I D + +GVLL
Sbjct: 151 VMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 210
Query: 501 LELITG 506
E++ G
Sbjct: 211 YEMLAG 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYE-YPANGTLEE--HLLKSSEQKAC 415
++L +V +L + H N+ +L D N +V E Y +E H +K +E A
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYLVMECYKGGELFDEIIHRMKFNEVDAA 139
Query: 416 LDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLD---EDYCVKVAGFGIPSTS 472
+I + S + +L I H DLK + L+ +D +K+ FG+ +
Sbjct: 140 -------VIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-- 187
Query: 473 LGVGSNSCNNQQAICV--------------NKTDVYDFGVLLLELITGCR----QADQST 514
V N ++ + K DV+ GV+L L+ G Q DQ
Sbjct: 188 --VFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE- 244
Query: 515 VTLQKIRSGK 524
L+K+ GK
Sbjct: 245 -ILRKVEKGK 253
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLL---KSSEQKAC 415
++ ++ L + H ++ +L I I+V EY N L ++++ K SEQ+A
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEAR 115
Query: 416 LDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+++++I A E I H DLK + LDE VK+A FG+
Sbjct: 116 -RFFQQIISAVEYCH---------RHKIVHRDLKPENLLLDEHLNVKIADFGL 158
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLL---KSSEQKAC 415
++ ++ L + H ++ +L I I+V EY N L ++++ K SEQ+A
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEAR 116
Query: 416 LDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+++++I A E I H DLK + LDE VK+A FG+
Sbjct: 117 -RFFQQIISAVEYCH---------RHKIVHRDLKPENLLLDEHLNVKIADFGL 159
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 424 IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCN 481
IA +L L + S H D+K+ + L E VK+A FG+ T + N+
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 482 N----------QQAICVNKTDVYDFGVLLLELITG 506
+Q+ +K D++ G+ +EL G
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEI 213
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 331 GSIY----AGVIGDGS--HVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
G +Y +G+ D S VAV+ + + +E D + L + ++S H+N+ R +G +
Sbjct: 62 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 121
Query: 384 DSGFINPIVVYEYPANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
S + ++ E A G L+ L ++ Q + L L +A + A +L+
Sbjct: 122 QS--LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH- 178
Query: 441 PPIFHHDLKSCYIFLD---EDYCVKVAGFGIPSTSLGVG---SNSCNN-----------Q 483
H D+ + L K+ FG+ G C
Sbjct: 179 --FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM 236
Query: 484 QAICVNKTDVYDFGVLLLELIT 505
+ I +KTD + FGVLL E+ +
Sbjct: 237 EGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHV----AVQKV-QCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V A++++ + + ++L + +++++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 78 PHVCRLLGICLTSTV---QLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 184
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 336 GVIGDGSH--------------VAVQKVQCENETDLIQ--VLSQVELLSAIMHRNLARLL 379
G++G+GS+ VA++K ++ +++ + +++LL + H NL LL
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 380 GCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEI 439
C +V+E+ + L++ L + LD+ ++ ++ + F
Sbjct: 91 EVCKKKK--RWYLVFEFVDHTILDDLELFPN----GLDYQ---VVQKYLFQIINGIGFCH 141
Query: 440 SPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGS 477
S I H D+K I + + VK+ FG T G
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLL---KSSEQKAC 415
++ ++ L + H ++ +L I I+V EY N L ++++ K SEQ+A
Sbjct: 54 RIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEAR 110
Query: 416 LDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+++++I A E I H DLK + LDE VK+A FG+
Sbjct: 111 -RFFQQIISAVEYCH---------RHKIVHRDLKPENLLLDEHLNVKIADFGL 153
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI----PSTSLGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 222
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 359 QVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLL---KSSEQKAC 415
++ ++ L + H ++ +L I I+V EY N L ++++ K SEQ+A
Sbjct: 50 RIEREISYLRLLRHPHIIKLYDVIKSKDEI--IMVIEYAGN-ELFDYIVQRDKMSEQEAR 106
Query: 416 LDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+++++I A E I H DLK + LDE VK+A FG+
Sbjct: 107 -RFFQQIISAVEYCH---------RHKIVHRDLKPENLLLDEHLNVKIADFGL 149
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 331 GSIY----AGVIGDGS--HVAVQKV-QCENETDLIQVLSQVELLSAIMHRNLARLLGCCI 383
G +Y +G+ D S VAV+ + + +E D + L + ++S H+N+ R +G +
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144
Query: 384 DSGFINPIVVYEYPANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
S + ++ E A G L+ L ++ Q + L L +A + A +L+
Sbjct: 145 QS--LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH- 201
Query: 441 PPIFHHDLKSCYIFLD---EDYCVKVAGFGIPSTSLGVG---SNSCNN-----------Q 483
H D+ + L K+ FG+ G C
Sbjct: 202 --FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM 259
Query: 484 QAICVNKTDVYDFGVLLLELIT 505
+ I +KTD + FGVLL E+ +
Sbjct: 260 EGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 213
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 212
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 204
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 203
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 212
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEI 216
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 213
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 200
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 91/211 (43%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L+ G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 84 PHVCRLLGICLTSTV---QLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 190
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 192
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 191
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 216
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 353 NETDLIQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ 412
++ + Q+ +++E+L ++ H N+ ++ D + N +V E G L E ++ + +
Sbjct: 60 SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED--YHNMYIVMETCEGGELLERIVSAQAR 117
Query: 413 -KACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDE---DYCVKVAGFGI 468
KA + Y +A ++ L + S + H DLK I + +K+ FG+
Sbjct: 118 GKALSEGY----VAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL 173
Query: 469 PS--TSLGVGSNSCNNQQAICVN--------KTDVYDFGVLLLELITGC 507
S +N+ + K D++ GV++ L+TGC
Sbjct: 174 AELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGC 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 190
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 189
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 190
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ FG+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHV----AVQKV-QCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V A++++ + + ++L + +++++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 77 PHVCRLLGICLTSTV---QLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 183
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 81 PHVCRLLGICLTSTV---QLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 187
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 91/211 (43%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L+ G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 84 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 190
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 424 IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCN 481
IA +L L + S H D+K+ + L E VK+A FG+ T + N+
Sbjct: 126 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 482 N----------QQAICVNKTDVYDFGVLLLELITG 506
+Q+ +K D++ G+ +EL G
Sbjct: 186 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 79 PHVCRLLGICLTSTV---QLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 185
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 424 IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCN 481
IA +L L + S H D+K+ + L E VK+A FG+ T + N
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 180
Query: 482 N----------QQAICVNKTDVYDFGVLLLELITG 506
+Q+ +K D++ G+ +EL G
Sbjct: 181 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGVI---GDGSHVAVQKVQCENETDLI---QVLSQVELLSAIMH 372
FK + L G++Y G+ G+ + V ++ T ++L + +++++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 111 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 161
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 162 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 217
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 406 LLKSSEQKACLDWYKRLIIAAETAS------VLAFLQFEISPPIFHHDLKSCYIFLDEDY 459
+L+ +++ L+ +KR E + + +Q+ + + H DLK +FL++D
Sbjct: 104 VLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM 163
Query: 460 CVKVAGFGIPSTSLGV---------GSNSCNNQQAICVN----KTDVYDFGVLLLELITG 506
VK+ FG+ +T + G+ + + +C + D++ G +L L+ G
Sbjct: 164 DVKIGDFGL-ATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 222
Query: 507 CRQADQSTVTLQKIRSGK 524
+ S + IR K
Sbjct: 223 KPPFETSCLKETYIRIKK 240
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 393 VYEYPANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
V EY G L HL + SE +A AE S L +L E + + + DLK
Sbjct: 226 VMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKN--VVYRDLK 276
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFG 497
+ LD+D +K+ FG+ + G+ C + + D + G
Sbjct: 277 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 336
Query: 498 VLLLELITG 506
V++ E++ G
Sbjct: 337 VVMYEMMCG 345
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 393 VYEYPANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
V EY G L HL + SE +A AE S L +L E + + + DLK
Sbjct: 229 VMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKN--VVYRDLK 279
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFG 497
+ LD+D +K+ FG+ + G+ C + + D + G
Sbjct: 280 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 339
Query: 498 VLLLELITG 506
V++ E++ G
Sbjct: 340 VVMYEMMCG 348
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 80 PHVCRLLGICLTSTV---QLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 186
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 424 IAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPS--TSLGVGSNSCN 481
IA +L L + S H D+K+ + L E VK+A FG+ T + N
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV 165
Query: 482 N----------QQAICVNKTDVYDFGVLLLELITG 506
+Q+ +K D++ G+ +EL G
Sbjct: 166 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 78 PHVCRLLGICLTSTV---QLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 184
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHV----AVQKV-QCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V A++++ + + ++L + +++++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 77 PHVCRLLGICLTSTV---QLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 183
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 406 LLKSSEQKACLDWYKRLIIAAETAS------VLAFLQFEISPPIFHHDLKSCYIFLDEDY 459
+L+ +++ L+ +KR E + + +Q+ + + H DLK +FL++D
Sbjct: 120 VLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM 179
Query: 460 CVKVAGFGIPSTSLGV---------GSNSCNNQQAICVN----KTDVYDFGVLLLELITG 506
VK+ FG+ +T + G+ + + +C + D++ G +L L+ G
Sbjct: 180 DVKIGDFGL-ATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 507 CRQADQSTVTLQKIRSGK 524
+ S + IR K
Sbjct: 239 KPPFETSCLKETYIRIKK 256
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 87 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 137
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 138 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 193
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 84 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 190
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 443 IFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGV---------GSNSCNNQQAICVN---- 489
+ H DLK +FL++D VK+ FG+ +T + G+ + + +C
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGL-ATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 490 KTDVYDFGVLLLELITGCRQADQSTVTLQKIRSGK 524
+ D++ G +L L+ G + S + IR K
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKK 256
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 406 LLKSSEQKACLDWYKRLIIAAETAS------VLAFLQFEISPPIFHHDLKSCYIFLDEDY 459
+L+ +++ L+ +KR E + + +Q+ + + H DLK +FL++D
Sbjct: 120 VLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM 179
Query: 460 CVKVAGFGIPSTSLGV---------GSNSCNNQQAICVN----KTDVYDFGVLLLELITG 506
VK+ FG+ +T + G+ + + +C + D++ G +L L+ G
Sbjct: 180 DVKIGDFGL-ATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 507 CRQADQSTVTLQKIRSGK 524
+ S + IR K
Sbjct: 239 KPPFETSCLKETYIRIKK 256
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 80 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 186
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHV----AVQKV-QCENETDLIQVLSQVELLSAIMH 372
FK + L+ G++Y G+ I +G V A++++ + + ++L + +++++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 77 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 183
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 79 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 185
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 102 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 152
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 153 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 208
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 83 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 133
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 134 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 189
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 27/172 (15%)
Query: 350 QCENETDL-IQVLSQVELLSAIMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLL- 407
Q ++D+ ++V ++ L + H ++ +L I ++V EY A G L ++++
Sbjct: 45 QLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDI--VMVIEY-AGGELFDYIVE 101
Query: 408 -KSSEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGF 466
K + +++++I A E I H DLK + LD++ VK+A F
Sbjct: 102 KKRMTEDEGRRFFQQIICAIEYCH---------RHKIVHRDLKPENLLLDDNLNVKIADF 152
Query: 467 GIPSTS-----LGVGSNSCNNQQAICVN-------KTDVYDFGVLLLELITG 506
G+ + L S N +N + DV+ G++L ++ G
Sbjct: 153 GLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 80 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 186
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 80 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 186
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 71 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 121
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 122 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 177
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLI--QVLSQVELLSAIMHRNLARLLG 380
+K+ + G +Y G A++K++ E E + I + ++ +L + H N+ +L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 381 CCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
+ ++V+E+ L++ L K + C + + + +L + +
Sbjct: 68 VIHTKKRL--VLVFEH-----LDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 441 PPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ H DLK + ++ + +K+A FG+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGL 146
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 77 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 183
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 77 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 183
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 393 VYEYPANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
V EY G L HL + SE +A AE S L +L E + + + DLK
Sbjct: 88 VMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKN--VVYRDLK 138
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFG 497
+ LD+D +K+ FG+ + G+ C + + D + G
Sbjct: 139 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 198
Query: 498 VLLLELITG 506
V++ E++ G
Sbjct: 199 VVMYEMMCG 207
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLI--QVLSQVELLSAIMHRNLARLLG 380
+K+ + G +Y G A++K++ E E + I + ++ +L + H N+ +L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 381 CCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
+ ++V+E+ L++ L K + C + + + +L + +
Sbjct: 68 VIHTKKRL--VLVFEH-----LDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 441 PPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ H DLK + ++ + +K+A FG+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGL 146
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 323 QKLADSKNGSIYAGVIGDGSHVAVQKVQCENETDLI--QVLSQVELLSAIMHRNLARLLG 380
+K+ + G +Y G A++K++ E E + I + ++ +L + H N+ +L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 381 CCIDSGFINPIVVYEYPANGTLEEHLLKSSEQKACLDWYKRLIIAAETASVLAFLQFEIS 440
+ ++V+E+ L++ L K + C + + + +L + +
Sbjct: 68 VIHTKKRL--VLVFEH-----LDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 441 PPIFHHDLKSCYIFLDEDYCVKVAGFGI 468
+ H DLK + ++ + +K+A FG+
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGL 146
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 43/229 (18%)
Query: 323 QKLADSKNGSI-----YAGV-----IGDGSHVAVQKV--QCENETDLIQ-VLSQVELLSA 369
+K+ D K G++ +AGV I G VA++ + + + ++Q V ++V++
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 370 IMHRNLARLLGCCIDSGFINPIVVYEYPANGTLEEHL---LKSSEQKACLDWYKRLIIAA 426
+ H ++ L DS ++ +V E NG + +L +K + + ++I
Sbjct: 68 LKHPSILELYNYFEDSNYV--YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG- 124
Query: 427 ETASVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNS----CNN 482
+ +L S I H DL + L + +K+A FG+ +T L + C
Sbjct: 125 -----MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGL-ATQLKMPHEKHYTLCGT 175
Query: 483 QQAICVN---------KTDVYDFGVLLLELITGCRQADQSTV--TLQKI 520
I ++DV+ G + L+ G D TV TL K+
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 319 FKDSQKLADSKNGSIYAGV-IGDGSHVAV-----QKVQCENETDLIQVLSQVELLSAIMH 372
FK + L G++Y G+ I +G V + + + + ++L + +++++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 373 RNLARLLGCCIDSGFINPIVVYEYPANGTLEEHLLKSSEQ---KACLDWYKRLIIAAETA 429
++ RLLG C+ S ++ + G L +++ + + + L+W + A
Sbjct: 74 PHVCRLLGICLTSTV---QLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 124
Query: 430 SVLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTSLGVGSNSCNNQ------ 483
+ +L+ + H DL + + + VK+ FG+ + LG + +
Sbjct: 125 EGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL-AKLLGAEEKEYHAEGGKVPI 180
Query: 484 ---------QAICVNKTDVYDFGVLLLELIT 505
I +++DV+ +GV + EL+T
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 393 VYEYPANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
V EY G L HL + SE +A AE S L +L E + + + DLK
Sbjct: 87 VMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKN--VVYRDLK 137
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFG 497
+ LD+D +K+ FG+ + G+ C + + D + G
Sbjct: 138 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 498 VLLLELITG 506
V++ E++ G
Sbjct: 198 VVMYEMMCG 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 24/129 (18%)
Query: 393 VYEYPANGTLEEHLLKS---SEQKACLDWYKRLIIAAETASVLAFLQFEISPPIFHHDLK 449
V EY G L HL + SE +A AE S L +L E + + + DLK
Sbjct: 86 VMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKN--VVYRDLK 136
Query: 450 SCYIFLDEDYCVKVAGFGIPSTSLGVGSNS---CNNQQAICV---------NKTDVYDFG 497
+ LD+D +K+ FG+ + G+ C + + D + G
Sbjct: 137 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 196
Query: 498 VLLLELITG 506
V++ E++ G
Sbjct: 197 VVMYEMMCG 205
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 431 VLAFLQFEISPPIFHHDLKSCYIFLDEDYCVKVAGFGIPSTS----LGVGSNSCNNQQAI 486
+L L++ S I H DLK + ++ED +K+ +G+ + G + I
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEI 193
Query: 487 CVN------KTDVYDFGVLLLELITG 506
+N D++ G ++ EL+TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,078,752
Number of Sequences: 62578
Number of extensions: 748198
Number of successful extensions: 2728
Number of sequences better than 100.0: 648
Number of HSP's better than 100.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 526
Number of HSP's that attempted gapping in prelim test: 2214
Number of HSP's gapped (non-prelim): 771
length of query: 618
length of database: 14,973,337
effective HSP length: 105
effective length of query: 513
effective length of database: 8,402,647
effective search space: 4310557911
effective search space used: 4310557911
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)