BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045898
(49 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255572775|ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative [Ricinus communis]
gi|223533320|gb|EEF35072.1| plant poly(A)+ RNA export protein, putative [Ricinus communis]
Length = 349
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/49 (93%), Positives = 46/49 (93%), Gaps = 1/49 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MATFGAAA A NQNPNKSIEVSQPPSDSVSSLCFSPKAN LVATSWDNQ
Sbjct: 1 MATFGAAATA-NQNPNKSIEVSQPPSDSVSSLCFSPKANFLVATSWDNQ 48
>gi|363807134|ref|NP_001242596.1| uncharacterized protein LOC100780721 [Glycine max]
gi|255641855|gb|ACU21196.1| unknown [Glycine max]
Length = 347
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 43/49 (87%), Gaps = 3/49 (6%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+TFGAAA N NPNKS EV+QPPSDS+SSLCFSPKAN LVATSWDNQ
Sbjct: 1 MSTFGAAA---NTNPNKSYEVAQPPSDSISSLCFSPKANFLVATSWDNQ 46
>gi|363806810|ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycine max]
gi|255638763|gb|ACU19686.1| unknown [Glycine max]
Length = 347
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 43/49 (87%), Gaps = 3/49 (6%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+TFGAAA N NPNKS EV+QPPSDS+SS+CFSPKAN LVATSWDNQ
Sbjct: 1 MSTFGAAA---NTNPNKSYEVAQPPSDSISSICFSPKANFLVATSWDNQ 46
>gi|194466247|gb|ACF74354.1| putative mRNA export protein [Arachis hypogaea]
Length = 179
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%), Gaps = 4/49 (8%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+TFG+A N NPNKS EV+QPP DS+SSLCFSPKAN LVATSWDNQ
Sbjct: 1 MSTFGSA----NTNPNKSYEVTQPPGDSISSLCFSPKANFLVATSWDNQ 45
>gi|357517225|ref|XP_003628901.1| Pre-mRNA-splicing factor prp46 [Medicago truncatula]
gi|355522923|gb|AET03377.1| Pre-mRNA-splicing factor prp46 [Medicago truncatula]
Length = 400
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 42/49 (85%), Gaps = 2/49 (4%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M++FGAA TN NPNKS EVSQPP+DS+SSL FSPKAN LVATSWDNQ
Sbjct: 1 MSSFGAAN--TNTNPNKSYEVSQPPTDSISSLSFSPKANFLVATSWDNQ 47
>gi|109390024|gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]
Length = 347
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FGAAA A N NPNKS EV QPPSDSVSSLCFSPKAN L+ATSWDNQ
Sbjct: 1 MSIFGAAA-AANTNPNKSTEVQQPPSDSVSSLCFSPKANFLIATSWDNQ 48
>gi|242053751|ref|XP_002456021.1| hypothetical protein SORBIDRAFT_03g028970 [Sorghum bicolor]
gi|241927996|gb|EES01141.1| hypothetical protein SORBIDRAFT_03g028970 [Sorghum bicolor]
Length = 344
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Query: 1 MATFG-AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MATFG A A A NQNPNKS+EV+ P DSVSSL FSPKAN LV+TSWDNQ
Sbjct: 1 MATFGTAGASAANQNPNKSVEVTPAPGDSVSSLSFSPKANHLVSTSWDNQ 50
>gi|168011685|ref|XP_001758533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690143|gb|EDQ76511.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA+FG + NPNKS EV+QPP+D +SSL FSPKAN LVATSWDNQ
Sbjct: 1 MASFGTLSSTQPHNPNKSFEVNQPPTDGISSLAFSPKANYLVATSWDNQ 49
>gi|297839869|ref|XP_002887816.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333657|gb|EFH64075.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
Length = 349
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MATFGA+A A N NPNKS EV+ P+DS+SSL FSP+A+ILVATSWDNQ
Sbjct: 1 MATFGASATA-NINPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQ 48
>gi|225443109|ref|XP_002274315.1| PREDICTED: rae1-like protein At1g80670 [Vitis vinifera]
gi|297743618|emb|CBI36485.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 40/49 (81%), Gaps = 4/49 (8%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ F AA N NPNKSIEV+QPP+DSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MSNFSAA----NPNPNKSIEVAQPPTDSVSSLKFSPKANFLVATSWDNQ 45
>gi|15220198|ref|NP_178182.1| Rae1-like protein [Arabidopsis thaliana]
gi|83305440|sp|Q38942.2|RAE1L_ARATH RecName: Full=Rae1-like protein At1g80670
gi|6503279|gb|AAF14655.1|AC011713_3 F23A5.2(form2) [Arabidopsis thaliana]
gi|21593271|gb|AAM65220.1| mRNA export protein, putative [Arabidopsis thaliana]
gi|94442413|gb|ABF18994.1| At1g80670 [Arabidopsis thaliana]
gi|332198314|gb|AEE36435.1| Rae1-like protein [Arabidopsis thaliana]
Length = 349
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MATFGA A A N NPNKS EV+ P+DS+SSL FSP+A+ILVATSWDNQ
Sbjct: 1 MATFGAPATA-NSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQ 48
>gi|218188723|gb|EEC71150.1| hypothetical protein OsI_02983 [Oryza sativa Indica Group]
Length = 281
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 38/49 (77%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA+F A A N NPNKS+EV+ P DSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MASFTAGAAGANNNPNKSLEVNPAPGDSVSSLSFSPKANHLVATSWDNQ 49
>gi|147765521|emb|CAN60438.1| hypothetical protein VITISV_035178 [Vitis vinifera]
Length = 197
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 40/49 (81%), Gaps = 4/49 (8%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ F AA N NPNKSIEV+QPP+DSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MSNFSAA----NPNPNKSIEVAQPPTDSVSSLKFSPKANFLVATSWDNQ 45
>gi|6503278|gb|AAF14654.1|AC011713_2 F23A5.2(form1) [Arabidopsis thaliana]
gi|1297188|gb|AAA98915.1| Theoretical protein with similarity to Swiss-Prot Accession
Number P41838 poly A+ RNA export protein [Arabidopsis
thaliana]
Length = 251
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MATFGA A A N NPNKS EV+ P+DS+SSL FSP+A+ILVATSWDNQ
Sbjct: 1 MATFGAPATA-NSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQ 48
>gi|356558620|ref|XP_003547602.1| PREDICTED: rae1-like protein At1g80670-like [Glycine max]
Length = 347
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 35/39 (89%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
TN NPNKS EV+QPP+DSVSSL FSPKAN LVATSWDNQ
Sbjct: 8 TNPNPNKSFEVNQPPTDSVSSLSFSPKANFLVATSWDNQ 46
>gi|356525894|ref|XP_003531556.1| PREDICTED: uncharacterized protein LOC100527204 [Glycine max]
Length = 347
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 35/39 (89%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
TN NPNKS EV+QPP+DSVSSL FSPKAN LVATSWDNQ
Sbjct: 8 TNPNPNKSFEVNQPPTDSVSSLSFSPKANFLVATSWDNQ 46
>gi|255631778|gb|ACU16256.1| unknown [Glycine max]
Length = 198
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 35/39 (89%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
TN NPNKS EV+QPP+DSVSSL FSPKAN LVATSWDNQ
Sbjct: 8 TNPNPNKSFEVNQPPTDSVSSLSFSPKANFLVATSWDNQ 46
>gi|302781857|ref|XP_002972702.1| hypothetical protein SELMODRAFT_173029 [Selaginella
moellendorffii]
gi|300159303|gb|EFJ25923.1| hypothetical protein SELMODRAFT_173029 [Selaginella
moellendorffii]
Length = 346
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MATFG A + NPNKS E+++ P+D +SSL FSPKAN L+ATSWDNQ
Sbjct: 1 MATFGVTQNAPSHNPNKSFEIAERPTDGISSLSFSPKANHLIATSWDNQ 49
>gi|302812815|ref|XP_002988094.1| hypothetical protein SELMODRAFT_235429 [Selaginella
moellendorffii]
gi|300144200|gb|EFJ10886.1| hypothetical protein SELMODRAFT_235429 [Selaginella
moellendorffii]
Length = 346
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MATFG A + NPNKS E+++ P+D +SSL FSPKAN L+ATSWDNQ
Sbjct: 1 MATFGVTQNAPSHNPNKSFEIAERPTDGISSLSFSPKANHLIATSWDNQ 49
>gi|116783044|gb|ABK22773.1| unknown [Picea sitchensis]
Length = 349
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 3 TFGAAAVATN-QNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
TFG +T+ NPNKS E+ QPP+DS+SSL FSPKAN LVATSWDNQ
Sbjct: 4 TFGTINTSTSPHNPNKSFEIVQPPNDSISSLSFSPKANYLVATSWDNQ 51
>gi|226493838|ref|NP_001152626.1| rae1-like protein [Zea mays]
gi|195658329|gb|ACG48632.1| rae1-like protein [Zea mays]
gi|414881292|tpg|DAA58423.1| TPA: rae1-like protein [Zea mays]
Length = 345
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 1 MATFG-AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA+F A A A N NPNKS EV+ P DSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MASFNPAGASAANHNPNKSFEVTPAPGDSVSSLSFSPKANHLVATSWDNQ 50
>gi|115475045|ref|NP_001061119.1| Os08g0176800 [Oryza sativa Japonica Group]
gi|38636797|dbj|BAD03038.1| putative RAE1 (RNA export 1, S.pombe) homolog [Oryza sativa
Japonica Group]
gi|38636974|dbj|BAD03234.1| putative RAE1 (RNA export 1, S.pombe) homolog [Oryza sativa
Japonica Group]
gi|113623088|dbj|BAF23033.1| Os08g0176800 [Oryza sativa Japonica Group]
gi|125560338|gb|EAZ05786.1| hypothetical protein OsI_28020 [Oryza sativa Indica Group]
gi|125602377|gb|EAZ41702.1| hypothetical protein OsJ_26237 [Oryza sativa Japonica Group]
gi|215767132|dbj|BAG99360.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MAT G +A N NPNKS EV P DSVSSL FSPK+N+LVATSWDNQ
Sbjct: 1 MATLG---LAPNMNPNKSFEVLPNPGDSVSSLSFSPKSNLLVATSWDNQ 46
>gi|224075655|ref|XP_002304718.1| predicted protein [Populus trichocarpa]
gi|222842150|gb|EEE79697.1| predicted protein [Populus trichocarpa]
Length = 349
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FGAAA A N NPNKSIEVS PPSDSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MSAFGAAATA-NTNPNKSIEVSHPPSDSVSSLSFSPKANFLVATSWDNQ 48
>gi|357445765|ref|XP_003593160.1| RNA export [Medicago truncatula]
gi|355482208|gb|AES63411.1| RNA export [Medicago truncatula]
Length = 351
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ F + N NPNKSIEV+QPP+DSVSSL FSPK+N+LVATSWDNQ
Sbjct: 1 MSNFLSNNTNPNPNPNKSIEVNQPPTDSVSSLNFSPKSNLLVATSWDNQ 49
>gi|15218336|ref|NP_173037.1| WD40 domain-containing protein [Arabidopsis thaliana]
gi|8927663|gb|AAF82154.1|AC034256_18 Contains similarity to polyA+ RNA export protein (rae1) from
Schizosaccharomyces pombe gb|U14951 and contains
multiple WD PF|00400 domains [Arabidopsis thaliana]
gi|332191252|gb|AEE29373.1| WD40 domain-containing protein [Arabidopsis thaliana]
Length = 140
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+T G A ++ NPN S E++ P +DS+SSL FSPKA+ILVATSWD Q
Sbjct: 1 MSTSGDKATSSTNNPNNSYEITPPATDSISSLSFSPKADILVATSWDCQ 49
>gi|326491763|dbj|BAJ94359.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508694|dbj|BAJ95869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MAT ++ +N NPNKS EV P DS+SSL FSPK+N+LVATSWDNQ
Sbjct: 1 MATL--TSLTSNANPNKSFEVLPNPGDSLSSLSFSPKSNLLVATSWDNQ 47
>gi|225447856|ref|XP_002271645.1| PREDICTED: rae1-like protein At1g80670 [Vitis vinifera]
gi|296081523|emb|CBI20046.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 42/49 (85%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ F + A+N NPNKSIEV+QPPSDSVSSL FSPKANILVATSWDNQ
Sbjct: 1 MSNFSSITTASNPNPNKSIEVAQPPSDSVSSLSFSPKANILVATSWDNQ 49
>gi|226508590|ref|NP_001150048.1| rae1-like protein [Zea mays]
gi|195636308|gb|ACG37622.1| rae1-like protein [Zea mays]
gi|223973949|gb|ACN31162.1| unknown [Zea mays]
gi|413916882|gb|AFW56814.1| Rae1-like protein [Zea mays]
Length = 343
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
+ N NPNKS E+ P DSVSSL FSPK+N+LVATSWDNQ
Sbjct: 6 GLTANPNPNKSFEILPNPGDSVSSLSFSPKSNLLVATSWDNQ 47
>gi|357155851|ref|XP_003577259.1| PREDICTED: rae1-like protein At1g80670-like [Brachypodium
distachyon]
Length = 343
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
++ +N NPNKS EV P DS+SSL FSPK+N+LVATSWDNQ
Sbjct: 6 SLTSNPNPNKSFEVLPNPGDSLSSLSFSPKSNLLVATSWDNQ 47
>gi|224053404|ref|XP_002297802.1| predicted protein [Populus trichocarpa]
gi|222845060|gb|EEE82607.1| predicted protein [Populus trichocarpa]
Length = 349
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG+A A N NPNKSIEV QPPSDSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MSAFGSAGTA-NTNPNKSIEVLQPPSDSVSSLSFSPKANFLVATSWDNQ 48
>gi|357135645|ref|XP_003569419.1| PREDICTED: rae1-like protein At1g80670-like [Brachypodium
distachyon]
Length = 345
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
KS+EV+ PP DSVSSL FSPKAN LVATSWDNQ
Sbjct: 18 KSLEVNSPPGDSVSSLSFSPKANHLVATSWDNQ 50
>gi|307106823|gb|EFN55068.1| hypothetical protein CHLNCDRAFT_23906 [Chlorella variabilis]
Length = 376
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
FG+AA A N NPNK +EV PSD +SSL FSP +N++VATSW Q
Sbjct: 10 FGSAAAAANTNPNKDLEVPNAPSDGISSLRFSPASNLMVATSWSGQ 55
>gi|222618914|gb|EEE55046.1| hypothetical protein OsJ_02737 [Oryza sativa Japonica Group]
Length = 281
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 37/49 (75%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA+F A N NPNKS+EV+ P DSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MASFTAGGGGANNNPNKSLEVNPAPGDSVSSLSFSPKANHLVATSWDNQ 49
>gi|115438767|ref|NP_001043663.1| Os01g0635400 [Oryza sativa Japonica Group]
gi|20161826|dbj|BAB90741.1| mRNA-associated protein mrnp41-like [Oryza sativa Japonica Group]
gi|55296031|dbj|BAD69442.1| mRNA-associated protein mrnp41-like [Oryza sativa Japonica Group]
gi|113533194|dbj|BAF05577.1| Os01g0635400 [Oryza sativa Japonica Group]
Length = 344
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 37/49 (75%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA+F A N NPNKS+EV+ P DSVSSL FSPKAN LVATSWDNQ
Sbjct: 1 MASFTAGGGGANNNPNKSLEVNPAPGDSVSSLSFSPKANHLVATSWDNQ 49
>gi|449543181|gb|EMD34158.1| hypothetical protein CERSUDRAFT_67742 [Ceriporiopsis
subvermispora B]
Length = 354
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 1 MATFGAAA----VATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
M+ F AA VA P+K IEV+ PPSDS+SSL FSP+A+ L A SWDN
Sbjct: 1 MSFFNTAASSSSVANPAQPDKDIEVNDPPSDSISSLAFSPQADYLAAASWDN 52
>gi|442754129|gb|JAA69224.1| Putative mrna export protein [Ixodes ricinus]
Length = 367
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
+ F AA+ NP K EV PP DS+SSL FSP + N L+A SWDNQ
Sbjct: 15 VGMFAAASATGTHNPMKDFEVVSPPDDSISSLAFSPASLPQNFLIAGSWDNQ 66
>gi|326532386|dbj|BAK05122.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 28/33 (84%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
KS+EV+ P DSVSSL FSPKAN L+ATSWDNQ
Sbjct: 18 KSLEVNPAPGDSVSSLSFSPKANHLIATSWDNQ 50
>gi|389749844|gb|EIM91015.1| WD40 repeat-like protein [Stereum hirsutum FP-91666 SS1]
Length = 351
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
M+ FG+AA + +K IEV PP DS+SSL FSP A+ L SWDN
Sbjct: 1 MSFFGSAASTSTATQDKDIEVVDPPPDSISSLGFSPAADYLAVGSWDN 48
>gi|241257853|ref|XP_002404672.1| mRNA export protein, putative [Ixodes scapularis]
gi|215496673|gb|EEC06313.1| mRNA export protein, putative [Ixodes scapularis]
Length = 367
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
+ F AA+ NP K EV PP DS+SSL FSP + N L+A SWDNQ
Sbjct: 15 VGMFSAASATGTHNPMKDFEVVSPPDDSISSLAFSPASLPQNFLIAGSWDNQ 66
>gi|91087123|ref|XP_975206.1| PREDICTED: similar to nucleoporin-17 [Tribolium castaneum]
gi|270011088|gb|EFA07536.1| RAE1 RNA export 1 homolog [Tribolium castaneum]
Length = 359
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
+ FG ++ NP K EV+QPP DS+SSL FSP N L+A SWDN
Sbjct: 7 IGGFGGTPTPSSANPMKDFEVTQPPDDSISSLAFSPATLPQNFLIAASWDN 57
>gi|395332235|gb|EJF64614.1| Poly(A)+ RNA export protein [Dichomitus squalens LYAD-421 SS1]
Length = 353
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 1 MATFG---AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
M+ FG + +AT P+K IEV+ PP+DS+SS+ FSP A+ L SWDN
Sbjct: 1 MSFFGTSTSGTLATQPPPDKDIEVADPPTDSISSVAFSPTADYLAVGSWDN 51
>gi|19113576|ref|NP_596784.1| RNA export factor, nucleoporin Rae1 [Schizosaccharomyces pombe
972h-]
gi|1172829|sp|P41838.1|RAE1_SCHPO RecName: Full=Poly(A)+ RNA export protein
gi|625094|gb|AAA86311.1| polyA+ RNA export [Schizosaccharomyces pombe]
gi|2842504|emb|CAA16856.1| RNA export factor, nucleoporin Rae1 [Schizosaccharomyces pombe]
Length = 352
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 1 MATFGAAAVATNQNP----NKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG A +T N K +EV+QPP DS+S L FSP+A L A+SWD++
Sbjct: 1 MSLFGQATTSTVSNATGDLKKDVEVAQPPEDSISDLAFSPQAEYLAASSWDSK 53
>gi|198420755|ref|XP_002124903.1| PREDICTED: similar to RAE1 RNA export 1 homolog [Ciona
intestinalis]
Length = 361
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 3 TFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPK---ANILVATSWDN 48
+FGA+ TN NP K IEV+ PP DS+S L FSP N L+A SW N
Sbjct: 12 SFGASNTTTNHNPMKDIEVTSPPDDSISCLEFSPATLPGNFLIAGSWAN 60
>gi|303279647|ref|XP_003059116.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458952|gb|EEH56248.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 351
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
FG A NPN +V+ PP+D +SSL +SP AN LV+TSWD
Sbjct: 7 FGVTAAQGATNPNNDFQVANPPNDGISSLSWSPTANFLVSTSWD 50
>gi|449689942|ref|XP_002160482.2| PREDICTED: mRNA export factor-like [Hydra magnipapillata]
Length = 355
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K +EV QPPSD++S L FSP AN L ATSWDN+
Sbjct: 21 KDVEVQQPPSDTISCLKFSPNANFLAATSWDNK 53
>gi|328720527|ref|XP_001944268.2| PREDICTED: mRNA export factor-like [Acyrthosiphon pisum]
Length = 358
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
F VA NPNK EV+QPP D+VS++ FSP + N L+A SWDN
Sbjct: 7 FSNKPVAAPTNPNKDFEVTQPPDDTVSAMAFSPATMQQNFLIAGSWDN 54
>gi|427789855|gb|JAA60379.1| Putative rae1/gle2 [Rhipicephalus pulchellus]
Length = 367
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
+ F A NP K EV PP DS+SS+ FSP + N LVA SWDNQ
Sbjct: 15 VGMFSGTAATGTHNPMKDFEVVSPPEDSISSMAFSPASLPQNFLVAGSWDNQ 66
>gi|427778161|gb|JAA54532.1| Putative rae1/gle2 [Rhipicephalus pulchellus]
Length = 394
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
+ F A NP K EV PP DS+SS+ FSP + N LVA SWDNQ
Sbjct: 15 VGMFSGTAATGTHNPMKDFEVVSPPEDSISSMAFSPASLPQNFLVAGSWDNQ 66
>gi|407929076|gb|EKG21915.1| hypothetical protein MPH_00835 [Macrophomina phaseolina MS6]
Length = 393
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
Query: 5 GAAAVATNQNP-----NKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
GA + +T NP +K ++++QPPSDS+S + FSP A+IL A+SWD
Sbjct: 7 GAGSASTAANPTQGDTSKDVQINQPPSDSISEIAFSPSADILAASSWDG 55
>gi|449447571|ref|XP_004141541.1| PREDICTED: rae1-like protein At1g80670-like [Cucumis sativus]
gi|449481503|ref|XP_004156202.1| PREDICTED: rae1-like protein At1g80670-like [Cucumis sativus]
Length = 344
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 35/42 (83%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
A N NPNKS EV+QPPSDSVSSL FSPKAN LVATSWDNQ
Sbjct: 2 AAFANPNPNKSFEVAQPPSDSVSSLSFSPKANHLVATSWDNQ 43
>gi|242020165|ref|XP_002430526.1| mRNA-associated protein mrnp, putative [Pediculus humanus
corporis]
gi|212515690|gb|EEB17788.1| mRNA-associated protein mrnp, putative [Pediculus humanus
corporis]
Length = 365
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 5 GAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
GA T NP K EV+ PP DSVSS+ FSP + N L+A SWDN
Sbjct: 16 GATVSQTTHNPMKDFEVTSPPDDSVSSIAFSPASLPQNFLIAGSWDN 62
>gi|66810355|ref|XP_638901.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
gi|60467510|gb|EAL65532.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
Length = 342
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKA-NILVATSWDNQ 49
+ +T NPN IE+S PPSD VS L FSPKA N +VA SWD +
Sbjct: 3 STSTTTNPNNDIELSSPPSDGVSCLKFSPKANNFIVAGSWDQK 45
>gi|402218223|gb|EJT98300.1| WD40 repeat-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 354
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IEV QPP+DS+S L FSP A+IL +SWDN
Sbjct: 24 KDIEVQQPPTDSISCLAFSPTADILAVSSWDN 55
>gi|403413375|emb|CCM00075.1| predicted protein [Fibroporia radiculosa]
Length = 354
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 1 MATFGAAA---VATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
M+ FG A+ T +K IEV+ PP+DS+SS+ FSP+A+ L SWDN
Sbjct: 1 MSFFGNASRSTTVTTTQADKDIEVADPPTDSISSISFSPQADYLAVASWDN 51
>gi|346469183|gb|AEO34436.1| hypothetical protein [Amblyomma maculatum]
Length = 367
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDNQ 49
+ F NP K EV PP DS+SS+ FSP + N LVA SWDNQ
Sbjct: 15 VGMFSGTTATGTHNPMKDFEVVSPPDDSISSMAFSPASLQQNFLVAGSWDNQ 66
>gi|346469181|gb|AEO34435.1| hypothetical protein [Amblyomma maculatum]
Length = 367
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDNQ 49
+ F NP K EV PP DS+SS+ FSP + N LVA SWDNQ
Sbjct: 15 VGMFSGTTATGTHNPMKDFEVVSPPDDSISSMAFSPASLQQNFLVAGSWDNQ 66
>gi|297850010|ref|XP_002892886.1| hypothetical protein ARALYDRAFT_334870 [Arabidopsis lyrata subsp.
lyrata]
gi|297338728|gb|EFH69145.1| hypothetical protein ARALYDRAFT_334870 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+T G A A N NPN S E++ P +DS+SSL FSP+A+ILVATSWD Q
Sbjct: 1 MSTSGDQATANNTNPNNSYEITPPATDSISSLSFSPRADILVATSWDCQ 49
>gi|443734884|gb|ELU18740.1| hypothetical protein CAPTEDRAFT_20827 [Capitella teleta]
Length = 371
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 7 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPK---ANILVATSWDN 48
A V N NP K IEV+ PP DSVSS+ FSP + LVA SWDN
Sbjct: 22 ATVTANVNPMKDIEVASPPDDSVSSMAFSPGVCPSTFLVAGSWDN 66
>gi|409048596|gb|EKM58074.1| hypothetical protein PHACADRAFT_139699 [Phanerochaete carnosa
HHB-10118-sp]
Length = 352
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
P+K IEV+ PP+DS+SSL FSP+A+ L SW+N+
Sbjct: 17 PDKDIEVADPPNDSISSLAFSPQADYLAVGSWNNE 51
>gi|391333096|ref|XP_003740958.1| PREDICTED: mRNA export factor-like [Metaseiulus occidentalis]
Length = 374
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 3 TFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDNQ 49
+FG NP K EV PP D+VS L FSP N LV+ SWDNQ
Sbjct: 19 SFGGKTAGATNNPMKDFEVPSPPDDTVSGLAFSPISLTQNFLVSGSWDNQ 68
>gi|390364596|ref|XP_795730.3| PREDICTED: mRNA export factor-like [Strongylocentrotus
purpuratus]
Length = 368
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 2 ATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
FG + NP K IEV+ PP DS+SSL FSP + L+A SWDN
Sbjct: 14 GVFGQTNTSGTHNPMKDIEVTSPPDDSISSLRFSPASIPNTFLIAGSWDN 63
>gi|145347967|ref|XP_001418430.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578659|gb|ABO96723.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 345
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 3 TFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
++G AA NPN V+ PP+D +SSL +SP N LVAT+WD
Sbjct: 2 SWGQAATQAPANPNGDFLVANPPNDGISSLSWSPTGNFLVATAWD 46
>gi|405966465|gb|EKC31744.1| mRNA export factor [Crassostrea gigas]
Length = 363
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 3 TFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANI----LVATSWDN 48
TFGA A +TN N K IEV PP DSVS + FSP N+ L+A SWDN
Sbjct: 10 TFGATA-STNYNAMKDIEVQSPPDDSVSVVKFSPATNMQSTFLIAGSWDN 58
>gi|321466710|gb|EFX77704.1| hypothetical protein DAPPUDRAFT_305360 [Daphnia pulex]
Length = 364
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
TN NP K E+ PP DSVS L FSP + N L+A SWDN
Sbjct: 22 TNHNPMKDFEIMSPPDDSVSCLAFSPASIPQNFLIAGSWDNH 63
>gi|330793489|ref|XP_003284816.1| hypothetical protein DICPUDRAFT_148649 [Dictyostelium purpureum]
gi|325085212|gb|EGC38623.1| hypothetical protein DICPUDRAFT_148649 [Dictyostelium purpureum]
Length = 342
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 7 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPK-ANILVATSWDNQ 49
++V N NPNK IE+ P +D +S L FSPK +N++VA SWD +
Sbjct: 5 SSVTNNHNPNKDIELQGPINDGISCLKFSPKTSNLIVAGSWDQK 48
>gi|339238067|ref|XP_003380588.1| mRNA export factor [Trichinella spiralis]
gi|316976516|gb|EFV59801.1| mRNA export factor [Trichinella spiralis]
Length = 445
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 13 QNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
NPNK EV QPP D+V +L FSP A N LV+ SWDN
Sbjct: 45 HNPNKDFEVVQPPDDTVQALKFSPPALAQNFLVSGSWDN 83
>gi|114052763|ref|NP_001040273.1| mRNA export protein [Bombyx mori]
gi|87248585|gb|ABD36345.1| mRNA export protein [Bombyx mori]
Length = 353
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA----NILVATSWDNQ 49
FG+ + NPNK +EVS PP D+VS+L FSP + L+A SWD Q
Sbjct: 2 FGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQ 51
>gi|255073427|ref|XP_002500388.1| predicted protein [Micromonas sp. RCC299]
gi|226515651|gb|ACO61646.1| predicted protein [Micromonas sp. RCC299]
Length = 370
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
NPN +V+ PP+D +SSL +SP AN LVAT+WD
Sbjct: 39 NPNNDFQVANPPNDGISSLSWSPVANFLVATAWDG 73
>gi|328769601|gb|EGF79644.1| hypothetical protein BATDEDRAFT_25321 [Batrachochytrium
dendrobatidis JAM81]
Length = 335
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I VSQPPS++V+ L FSP+A+ L A+SWDNQ
Sbjct: 9 GIPVSQPPSNTVTGLAFSPQADFLAASSWDNQ 40
>gi|294875421|ref|XP_002767313.1| mRNA export protein, putative [Perkinsus marinus ATCC 50983]
gi|239868876|gb|EER00031.1| mRNA export protein, putative [Perkinsus marinus ATCC 50983]
Length = 369
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
N N N S EV+Q P D+VS L +SP ANIL A SWD Q
Sbjct: 21 NPNTNNSHEVAQSPGDTVSELAWSPAANILAAASWDKQ 58
>gi|393241371|gb|EJD48893.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 352
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 1 MATFGAAAVAT------NQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG A ++ N + + IEVS PP DS+SSL F P A+ L SW+NQ
Sbjct: 1 MSFFGGAGSSSALTTTNNASAERDIEVSDPPDDSISSLAFCPVADYLAVGSWNNQ 55
>gi|169859499|ref|XP_001836388.1| Poly(A)+ RNA export protein [Coprinopsis cinerea okayama7#130]
gi|116502535|gb|EAU85430.1| Poly(A)+ RNA export protein [Coprinopsis cinerea okayama7#130]
Length = 353
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
+K +EV++PP+DS+SS+ FSP+A+ L SWDN
Sbjct: 18 DKDVEVAEPPTDSISSVSFSPQADYLAVGSWDN 50
>gi|294935396|ref|XP_002781412.1| mRNA export protein, putative [Perkinsus marinus ATCC 50983]
gi|239892013|gb|EER13207.1| mRNA export protein, putative [Perkinsus marinus ATCC 50983]
Length = 183
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
N N N S EV+Q P D+VS L +SP ANIL A SWD Q
Sbjct: 21 NPNTNNSHEVAQSPGDTVSELAWSPAANILAAASWDKQ 58
>gi|158300184|ref|XP_320184.3| AGAP012373-PA [Anopheles gambiae str. PEST]
gi|157013035|gb|EAA00182.3| AGAP012373-PA [Anopheles gambiae str. PEST]
Length = 362
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
FG+ T NP K EV+ PP D+VS++ FSP + N L+A SWD
Sbjct: 14 FGSPTATTTTNPMKDFEVTSPPEDTVSAMEFSPATLQQNFLIAGSWD 60
>gi|402218222|gb|EJT98299.1| WD40 repeat-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 350
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
+K +EV QPP+DS+S + FSP A+IL ++WDN
Sbjct: 20 SKDVEVQQPPTDSISWMAFSPTADILAVSTWDN 52
>gi|71894917|ref|NP_001026039.1| RAE1 (RNA export 1, S.pombe) homolog [Gallus gallus]
gi|53133712|emb|CAG32185.1| hypothetical protein RCJMB04_19j3 [Gallus gallus]
Length = 246
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ A N NP K IEV+ PP DS+S L FSP N L+A SW N
Sbjct: 18 FGST-TADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAGSWAN 64
>gi|449274256|gb|EMC83539.1| mRNA export factor [Columba livia]
Length = 368
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ A N NP K IEV+ PP DS+S L FSP N L+A SW N
Sbjct: 18 FGST-TADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAGSWAN 64
>gi|224078529|ref|XP_002199237.1| PREDICTED: mRNA export factor [Taeniopygia guttata]
Length = 368
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ A N NP K IEV+ PP DS+S L FSP N L+A SW N
Sbjct: 18 FGST-TADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAGSWAN 64
>gi|332372953|gb|AEE61618.1| unknown [Dendroctonus ponderosae]
Length = 357
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
+ +F + NP EV QPP DS+SSL FSP A LVA SWDN
Sbjct: 7 IGSFASTTTVAKPNPMNDYEVVQPPDDSISSLAFSPAAIPQTFLVAGSWDN 57
>gi|312378429|gb|EFR25008.1| hypothetical protein AND_10038 [Anopheles darlingi]
Length = 361
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
FG T NP K EV+ PP D+VS++ FSP + N L+A SWD
Sbjct: 13 FGTPTATTTSNPMKDFEVTSPPEDTVSAMEFSPATLQQNFLIAGSWD 59
>gi|388578903|gb|EIM19235.1| WD40 repeat-like protein [Wallemia sebi CBS 633.66]
Length = 334
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
NK EV+ PP+D VS L FSP A+IL SWDN
Sbjct: 3 NKDFEVTAPPTDGVSCLAFSPTADILAVGSWDN 35
>gi|331239267|ref|XP_003332287.1| hypothetical protein PGTG_14583 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309311277|gb|EFP87868.1| hypothetical protein PGTG_14583 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 379
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 2 ATFGAAA---VATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
FG + T Q+P K IEV PP+D +SS+ +SP+A+ L A SW N+
Sbjct: 13 GVFGGGSSSTTVTTQDP-KDIEVENPPTDGISSIAWSPQADFLAAGSWSNE 62
>gi|328769817|gb|EGF79860.1| hypothetical protein BATDEDRAFT_16768 [Batrachochytrium
dendrobatidis JAM81]
Length = 342
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K IEV + P D V+ L FSP+A+ L A+SWDNQ
Sbjct: 11 KDIEVPRSPGDGVTGLAFSPQADFLAASSWDNQ 43
>gi|384500547|gb|EIE91038.1| hypothetical protein RO3G_15749 [Rhizopus delemar RA 99-880]
Length = 330
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
NK EV+ PP+DSVS L FS +A+ L +SWDNQ
Sbjct: 4 NKDFEVANPPTDSVSGLDFSTQADYLAVSSWDNQ 37
>gi|308804978|ref|XP_003079801.1| transducin family protein / WD-40 repeat family protein (ISS)
[Ostreococcus tauri]
gi|116058258|emb|CAL53447.1| transducin family protein / WD-40 repeat family protein (ISS)
[Ostreococcus tauri]
Length = 345
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
NPN V+ PPSD +SSL +SP N LVAT+WD
Sbjct: 11 NPNGDFTVANPPSDGISSLEWSPVGNFLVATAWD 44
>gi|452819189|gb|EME26258.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
Length = 369
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 6 AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA----NILVATSWDNQ 49
A A NPN V+Q P+D+VSS+ FSPKA N +VA SWDN+
Sbjct: 20 AGVTAGIHNPNNDKLVNQSPNDTVSSIAFSPKALAPNNFIVAGSWDNE 67
>gi|449016574|dbj|BAM79976.1| probable mRNA-associated protein MRNP 41, RAE1 homolog
[Cyanidioschyzon merolae strain 10D]
Length = 408
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 5 GAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA----NILVATSWDNQ 49
G A NPN VS PP+D++SS+ FSP A N ++AT+WDN+
Sbjct: 31 GGALNTATLNPNNDFMVSDPPNDTISSVHFSPAALLPRNFIIATTWDNE 79
>gi|452819188|gb|EME26257.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 356
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 6 AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA----NILVATSWDNQ 49
A A NPN V+Q P+D+VSS+ FSPKA N +VA SWDN+
Sbjct: 20 AGVTAGIHNPNNDKLVNQSPNDTVSSIAFSPKALAPNNFIVAGSWDNE 67
>gi|390595407|gb|EIN04812.1| Poly(A)+ RNA export protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 352
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 1 MATFGAAAVATN--QNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
M+ FGA + AT Q IEV+ PP+DS+SSL FS L SWDN
Sbjct: 1 MSFFGAGSSATTTAQKDPPDIEVADPPTDSISSLAFSGAGEFLAVGSWDN 50
>gi|392564197|gb|EIW57375.1| WD40 repeat-like protein [Trametes versicolor FP-101664 SS1]
Length = 360
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IEV+ PP+DS+SS+ FSP A+ L SWDN
Sbjct: 22 KDIEVADPPTDSISSVAFSPTADYLAVGSWDN 53
>gi|147899686|ref|NP_001083956.1| Rae1/Gle2 protein [Xenopus laevis]
gi|30039225|gb|AAP12530.1| Rae1/Gle2 [Xenopus laevis]
gi|50414519|gb|AAH77196.1| Rae1/Gle2 protein [Xenopus laevis]
Length = 368
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSPK---ANILVATSWDN 48
N NP K IEV+ PP DS+S L FSP+ N L+A SW N
Sbjct: 25 NHNPMKDIEVASPPDDSISCLSFSPQTLPGNFLIAGSWAN 64
>gi|387017070|gb|AFJ50653.1| mRNA export factor-like [Crotalus adamanteus]
Length = 368
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ A N NP K IEV+ PP DS+ L FSP N L+A SW N
Sbjct: 18 FGSTAT-DNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAGSWAN 64
>gi|149639779|ref|XP_001510132.1| PREDICTED: mRNA export factor-like [Ornithorhynchus anatinus]
Length = 368
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ A N NP K IEV+ PP DS+ L FSP N L+A SW N
Sbjct: 18 FGST-TADNHNPMKDIEVTSPPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|393221515|gb|EJD07000.1| poly RNA export protein [Fomitiporia mediterranea MF3/22]
Length = 363
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
G A+ AT K EVS+PP DS+SSL FSP A+ L SW+N+
Sbjct: 20 LGGASAATTA-WTKDAEVSEPPGDSISSLSFSPIADFLAVGSWNNE 64
>gi|302674866|ref|XP_003027117.1| hypothetical protein SCHCODRAFT_258667 [Schizophyllum commune
H4-8]
gi|300100803|gb|EFI92214.1| hypothetical protein SCHCODRAFT_258667 [Schizophyllum commune
H4-8]
Length = 349
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 10 ATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
A++ + K +E+ PPSDS+SS+ FSP+A+ L SWDN
Sbjct: 8 ASSSSAEKDVEMPDPPSDSISSVAFSPQADYLAVGSWDN 46
>gi|384248815|gb|EIE22298.1| WD40 repeat-like protein [Coccomyxa subellipsoidea C-169]
Length = 350
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 5 GAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
G A ++N N NK EV+ PPSDS+SSL FSP AN L+ATSWDNQ
Sbjct: 11 GLAVASSNYNANKDTEVASPPSDSISSLSFSPAANYLIATSWDNQ 55
>gi|353227549|emb|CCA78052.1| probable SONA [Piriformospora indica DSM 11827]
Length = 349
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP--KANILVATSWDN 48
M+ FG+ A A+ P K E+ PPSDS+SSL FSP +++ L SWDN
Sbjct: 1 MSFFGSGAAASATEP-KDAELVDPPSDSISSLAFSPAQQSDYLAVGSWDN 49
>gi|336370821|gb|EGN99161.1| hypothetical protein SERLA73DRAFT_182013 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383581|gb|EGO24730.1| hypothetical protein SERLADRAFT_468460 [Serpula lacrymans var.
lacrymans S7.9]
Length = 353
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
+K IEV +PPSDS+SSL FS A+ L SWDN
Sbjct: 17 DKDIEVPEPPSDSISSLAFSSAADYLAVGSWDN 49
>gi|357627886|gb|EHJ77417.1| mRNA export protein [Danaus plexippus]
Length = 350
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWD 47
N NPNK +EV+ PP D+VS+L FSP + L+A SWD
Sbjct: 9 NSNPNKDVEVASPPEDTVSALEFSPPSVPQTFLIAGSWD 47
>gi|384487099|gb|EIE79279.1| hypothetical protein RO3G_03984 [Rhizopus delemar RA 99-880]
Length = 330
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
NK EVS PP+D+++ L FS +A+ L +SWDNQ
Sbjct: 4 NKDFEVSNPPTDTITGLDFSSQADYLAVSSWDNQ 37
>gi|299750026|ref|XP_001836495.2| polyA+ RNA export [Coprinopsis cinerea okayama7#130]
gi|298408707|gb|EAU85308.2| polyA+ RNA export [Coprinopsis cinerea okayama7#130]
Length = 356
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
K +EV+ PP+DS+SSL FSP+A L SWD
Sbjct: 21 EKDVEVADPPTDSISSLSFSPQAEYLAVASWD 52
>gi|62858469|ref|NP_001017142.1| mRNA export factor [Xenopus (Silurana) tropicalis]
gi|82231254|sp|Q5FVA9.1|RAE1L_XENTR RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|58477227|gb|AAH90109.1| MGC97718 protein [Xenopus (Silurana) tropicalis]
gi|89272839|emb|CAJ82097.1| RAE1 RNA export 1 homolog (S. pombe) [Xenopus (Silurana)
tropicalis]
Length = 368
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
N NP K IEV+ PP DS+S L FSP N L+A SW N
Sbjct: 25 NHNPMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWAN 64
>gi|401888186|gb|EJT52149.1| hypothetical protein A1Q1_06255 [Trichosporon asahii var. asahii
CBS 2479]
gi|406695510|gb|EKC98815.1| hypothetical protein A1Q2_06918 [Trichosporon asahii var. asahii
CBS 8904]
Length = 295
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IE+ QPP DSVS + FSP +IL SWDN
Sbjct: 10 KDIELVQPPGDSVSKIAFSPTQDILGVASWDN 41
>gi|148226266|ref|NP_001091418.1| RAE1 RNA export 1 homolog [Xenopus laevis]
gi|126631410|gb|AAI33772.1| LOC100049109 protein [Xenopus laevis]
Length = 368
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
N NP K IEV+ PP DS+S L FSP N L+A SW N
Sbjct: 25 NHNPMKDIEVASPPDDSISCLSFSPPTLPGNFLIAGSWAN 64
>gi|449301462|gb|EMC97473.1| hypothetical protein BAUCODRAFT_453387 [Baudoinia compniacensis
UAMH 10762]
Length = 359
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T + +K ++VS PP+DS+S L FSP ++ L +SWDN+
Sbjct: 15 TQGDLSKDVQVSDPPTDSISDLVFSPASDHLAVSSWDNK 53
>gi|58261972|ref|XP_568396.1| hypothetical protein CNM00860 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58261974|ref|XP_568397.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical
protein (CNM00860) partial mRNA
gi|134118283|ref|XP_772155.1| hypothetical protein CNBM0750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254763|gb|EAL17508.1| hypothetical protein CNBM0750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230569|gb|AAW46879.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57230570|gb|AAW46880.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 366
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IE++ PP+DS+S + FSP A+IL SWDN
Sbjct: 10 KDIELANPPTDSISRIEFSPTADILAVASWDN 41
>gi|398389332|ref|XP_003848127.1| hypothetical protein MYCGRDRAFT_111499 [Zymoseptoria tritici
IPO323]
gi|339468001|gb|EGP83103.1| hypothetical protein MYCGRDRAFT_111499 [Zymoseptoria tritici
IPO323]
Length = 356
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 6 AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
+AA T + +EV+ PP+DSVS+L FSP A+ L +SWDN
Sbjct: 8 SAANPTQGDLKGDVEVANPPTDSVSALRFSPAADYLSVSSWDN 50
>gi|170056524|ref|XP_001864068.1| nucleoporin-17 [Culex quinquefasciatus]
gi|167876165|gb|EDS39548.1| nucleoporin-17 [Culex quinquefasciatus]
Length = 361
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG NP K EV+ PP D+VS++ FSP + N L+A SWD+
Sbjct: 13 FGGTTAVAPVNPMKDFEVTSPPEDTVSAMEFSPATLQQNFLIAGSWDS 60
>gi|156402321|ref|XP_001639539.1| predicted protein [Nematostella vectensis]
gi|156226668|gb|EDO47476.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IEV PP D+++SL F PKA+ L+A+SW N
Sbjct: 2 KDIEVQSPPDDTITSLKFCPKADFLIASSWAN 33
>gi|321265035|ref|XP_003197234.1| component of the nuclear pore complex required for polyadenylated
RNA export; Gle2p [Cryptococcus gattii WM276]
gi|317463713|gb|ADV25447.1| Component of the nuclear pore complex required for polyadenylated
RNA export, putative; Gle2p [Cryptococcus gattii WM276]
Length = 365
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IE++ PP+DS+SS+ FSP +IL SWDN
Sbjct: 10 KDIELANPPTDSISSIEFSPTTDILAVASWDN 41
>gi|327278045|ref|XP_003223773.1| PREDICTED: mRNA export factor-like [Anolis carolinensis]
Length = 368
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
N NP K IEV+ PP DS+ L FSP N L+A SW N
Sbjct: 25 NHNPMKDIEVTSPPDDSIGCLAFSPPVLPGNFLIAGSWAN 64
>gi|383855984|ref|XP_003703490.1| PREDICTED: mRNA export factor-like [Megachile rotundata]
Length = 355
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWD 47
+T+ NP + EV PP DS+SSL FSP + N LVA SWD
Sbjct: 11 GTSTSSNPMQDFEVVSPPDDSISSLAFSPASIPQNFLVAGSWD 53
>gi|340717440|ref|XP_003397190.1| PREDICTED: mRNA export factor-like [Bombus terrestris]
Length = 355
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWD 47
+T NP + EV PP DSVSSL FSP N LVA SWD
Sbjct: 11 GTSTTSNPMQDYEVVSPPDDSVSSLAFSPACIPQNFLVAGSWD 53
>gi|350407466|ref|XP_003488095.1| PREDICTED: mRNA export factor-like [Bombus impatiens]
Length = 355
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWD 47
+T NP + EV PP DSVSSL FSP N LVA SWD
Sbjct: 11 GTSTTSNPMQDYEVVSPPDDSVSSLAFSPACIPQNFLVAGSWD 53
>gi|440795607|gb|ELR16727.1| RNA export 1, putative [Acanthamoeba castellanii str. Neff]
Length = 335
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 9 VATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
++ +NPN V P D +SS+ +SPK+NI VATSWDNQ
Sbjct: 2 MSGGENPNNDSVVGTVP-DGISSISWSPKSNIFVATSWDNQ 41
>gi|328861763|gb|EGG10865.1| hypothetical protein MELLADRAFT_92212 [Melampsora larici-populina
98AG31]
Length = 405
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K IEV PP+D +SS+ +SP+A+ L A SW N+
Sbjct: 29 KDIEVENPPTDGISSIAWSPQADFLAAGSWSNE 61
>gi|157115041|ref|XP_001652531.1| mitotic checkpoint protein and poly(a)+ RNA export protein [Aedes
aegypti]
gi|108877065|gb|EAT41290.1| AAEL007066-PA [Aedes aegypti]
Length = 359
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
FGA A NP K EV+ PP D+VS++ FSP + N L+A SWD
Sbjct: 12 FGATTAAPT-NPMKDFEVTSPPDDTVSAMEFSPATLQQNFLIAGSWD 57
>gi|322796210|gb|EFZ18786.1| hypothetical protein SINV_11503 [Solenopsis invicta]
Length = 355
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWD 47
A + NP + EV PP DSVSSL FSP + N LVA SWD
Sbjct: 11 ATSNTSNPMQDFEVVSPPDDSVSSLAFSPASIPQNFLVAGSWD 53
>gi|412992892|emb|CCO16425.1| Poly(A)+ RNA export protein [Bathycoccus prasinos]
Length = 372
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
NPN + V P D ++SL +SP N LVAT WDN+
Sbjct: 40 NPNNDMLVQSSPQDGITSLKWSPTGNFLVATGWDNK 75
>gi|213409437|ref|XP_002175489.1| Poly(A)+ RNA export protein [Schizosaccharomyces japonicus
yFS275]
gi|212003536|gb|EEB09196.1| Poly(A)+ RNA export protein [Schizosaccharomyces japonicus
yFS275]
Length = 352
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
+ I V QPP D+VS L FSP+A L A SWD++
Sbjct: 22 QDIMVQQPPDDTVSDLAFSPQAEFLAAASWDSK 54
>gi|345488560|ref|XP_001601846.2| PREDICTED: mRNA export factor-like [Nasonia vitripennis]
Length = 356
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWD 47
NP K EV PP DS+SSL FSP N LVA SWD
Sbjct: 17 NPMKDFEVVSPPDDSISSLAFSPATIPQNFLVAGSWD 53
>gi|332029304|gb|EGI69287.1| mRNA export factor [Acromyrmex echinatior]
Length = 355
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
NP + EV PP DSVSSL FSP + N LVA SWD
Sbjct: 17 NPMQDFEVVSPPDDSVSSLAFSPASIQQNFLVAGSWD 53
>gi|281200958|gb|EFA75172.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
Length = 340
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
IEV+ PPSD ++SL FS K N L A SWD Q
Sbjct: 16 IEVANPPSDGITSLKFSSKNNYLTAGSWDKQ 46
>gi|452842726|gb|EME44662.1| hypothetical protein DOTSEDRAFT_72198 [Dothistroma septosporum
NZE10]
Length = 363
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 21 VSQPPSDSVSSLCFSPKANILVATSWDNQ 49
+ +PPSDS+S + FSPK++ L A+SWDN+
Sbjct: 30 IQEPPSDSISDIRFSPKSDHLAASSWDNK 58
>gi|47222886|emb|CAF96553.1| unnamed protein product [Tetraodon nigroviridis]
Length = 479
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Query: 4 FGAAAVAT-------NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FGA + NP K IEV+ PP DS+S L FSP N L+ SW N
Sbjct: 10 FGAGGTGVFGNTTTDSHNPMKDIEVTSPPDDSISCLAFSPPTIPGNFLIGGSWAN 64
>gi|195124107|ref|XP_002006535.1| GI21110 [Drosophila mojavensis]
gi|193911603|gb|EDW10470.1| GI21110 [Drosophila mojavensis]
Length = 349
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA-----NILVATSWDN 48
FGAA TN+ EV+ PP DSV++L FSP N L+A SWDN
Sbjct: 2 FGAAQTTTNRM--NDFEVASPPDDSVTALEFSPSTLQVPKNFLIAGSWDN 49
>gi|405123542|gb|AFR98306.1| nucleoporin GLE2 [Cryptococcus neoformans var. grubii H99]
Length = 366
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IE++ PP+DS+S + FSP +IL SWDN
Sbjct: 10 KDIELANPPTDSISRIEFSPTTDILAVASWDN 41
>gi|328706746|ref|XP_001950323.2| PREDICTED: mRNA export factor-like [Acyrthosiphon pisum]
Length = 360
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
M+T + A NPN EV+QPP D+VS+L FSP + L++ WDN
Sbjct: 1 MSTESVSEAAAAANPNNDFEVTQPPDDTVSALEFSPATVQQTYLLSGGWDN 51
>gi|410920097|ref|XP_003973520.1| PREDICTED: mRNA export factor-like [Takifugu rubripes]
Length = 369
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Query: 4 FGAAAVAT-------NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FGA + NP K IEV+ PP DS+S L FSP N L+ SW N
Sbjct: 10 FGAGGTGVFGNTTTDSHNPMKDIEVTSPPDDSISCLAFSPPTIPGNFLIGGSWAN 64
>gi|328777520|ref|XP_392693.2| PREDICTED: mRNA export factor-like [Apis mellifera]
gi|380029205|ref|XP_003698271.1| PREDICTED: mRNA export factor-like [Apis florea]
Length = 331
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWD 47
++ NP + EV PP DSVSSL FSP + N LVA SWD
Sbjct: 11 GTSSTSNPMQDFEVVSPPDDSVSSLAFSPASIPQNFLVAGSWD 53
>gi|303283458|ref|XP_003061020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457371|gb|EEH54670.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 351
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 6 AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
AA+ T+ +P +E++ PP+D ++SL FSP + +L+ATSWD
Sbjct: 2 AASAGTSGSP-LGMELASPPTDGITSLNFSPDSGLLLATSWD 42
>gi|307199321|gb|EFN79974.1| mRNA export factor [Harpegnathos saltator]
Length = 355
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
++ NP + EV PP DS+SSL FSP + N LVA SWD
Sbjct: 11 GTSSTSNPMQDFEVVSPPDDSISSLAFSPPSIQQNFLVAGSWD 53
>gi|307172987|gb|EFN64129.1| mRNA export factor [Camponotus floridanus]
Length = 355
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
NP + EV PP DS+SSL FSP + N LVA SWD
Sbjct: 17 NPMQDFEVVSPPDDSISSLAFSPASIQQNFLVAGSWD 53
>gi|432859467|ref|XP_004069122.1| PREDICTED: mRNA export factor-like [Oryzias latipes]
Length = 368
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 13 QNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
NP K +EV+ PP DS+S L FSP N L+A SW N
Sbjct: 26 HNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAGSWAN 64
>gi|384493928|gb|EIE84419.1| hypothetical protein RO3G_09129 [Rhizopus delemar RA 99-880]
Length = 329
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWD 47
EV PP+D +S+L FSP+A IL A SWD
Sbjct: 6 FEVVSPPTDGISALAFSPQAEILAAASWD 34
>gi|213514014|ref|NP_001134447.1| mRNA export factor [Salmo salar]
gi|209733380|gb|ACI67559.1| mRNA export factor [Salmo salar]
gi|303668375|gb|ADM16297.1| mRNA export factor [Salmo salar]
Length = 365
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 13 QNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
NP K +EV+ PP DS+S L FSP A N L+ SW N
Sbjct: 23 HNPMKDVEVTSPPDDSISCLAFSPPAMPGNFLIGGSWAN 61
>gi|395756964|ref|XP_002834597.2| PREDICTED: mRNA export factor-like, partial [Pongo abelii]
Length = 96
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 6 AAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 19 GSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|297259500|ref|XP_001088020.2| PREDICTED: mRNA export factor isoform 5 [Macaca mulatta]
Length = 406
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 56 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 102
>gi|410055352|ref|XP_003953827.1| PREDICTED: mRNA export factor [Pan troglodytes]
Length = 406
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 56 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 102
>gi|397469114|ref|XP_003806209.1| PREDICTED: LOW QUALITY PROTEIN: mRNA export factor [Pan paniscus]
Length = 406
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 56 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 102
>gi|75076335|sp|Q4R6D2.1|RAE1L_MACFA RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|67969993|dbj|BAE01343.1| unnamed protein product [Macaca fascicularis]
Length = 368
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|37908080|gb|AAR04856.1| RNA export 1-like protein [Homo sapiens]
Length = 368
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|332208804|ref|XP_003253499.1| PREDICTED: mRNA export factor [Nomascus leucogenys]
Length = 430
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 84 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 130
>gi|4506399|ref|NP_003601.1| mRNA export factor [Homo sapiens]
gi|62739173|ref|NP_001015885.1| mRNA export factor [Homo sapiens]
gi|197099178|ref|NP_001124680.1| mRNA export factor [Pongo abelii]
gi|402882173|ref|XP_003904625.1| PREDICTED: mRNA export factor [Papio anubis]
gi|3122666|sp|P78406.1|RAE1L_HUMAN RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|75070984|sp|Q5RF99.1|RAEL1_PONAB RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|297343114|pdb|3MMY|A Chain A, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export
Factor Rae1
gi|297343116|pdb|3MMY|C Chain C, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export
Factor Rae1
gi|297343118|pdb|3MMY|E Chain E, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export
Factor Rae1
gi|297343120|pdb|3MMY|G Chain G, Structural And Functional Analysis Of The Interaction
Between The Nucleoporin Nup98 And The Mrna Export
Factor Rae1
gi|1903456|gb|AAC28126.1| mRNA export protein [Homo sapiens]
gi|55725388|emb|CAH89558.1| hypothetical protein [Pongo abelii]
gi|74354340|gb|AAI03755.1| RAE1 RNA export 1 homolog (S. pombe) [Homo sapiens]
gi|76827085|gb|AAI06924.1| RAE1 RNA export 1 homolog (S. pombe) [Homo sapiens]
gi|76827088|gb|AAI06925.1| RAE1 RNA export 1 homolog (S. pombe) [Homo sapiens]
gi|119595929|gb|EAW75523.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_a [Homo
sapiens]
gi|119595930|gb|EAW75524.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_a [Homo
sapiens]
gi|119595931|gb|EAW75525.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_a [Homo
sapiens]
gi|158257926|dbj|BAF84936.1| unnamed protein product [Homo sapiens]
gi|261860400|dbj|BAI46722.1| mRNA export factor [synthetic construct]
gi|355563007|gb|EHH19569.1| mRNA-associated protein mrnp 41 [Macaca mulatta]
gi|355784367|gb|EHH65218.1| mRNA-associated protein mrnp 41 [Macaca fascicularis]
gi|380817308|gb|AFE80528.1| mRNA export factor [Macaca mulatta]
gi|383422257|gb|AFH34342.1| mRNA export factor [Macaca mulatta]
gi|384943264|gb|AFI35237.1| mRNA export factor [Macaca mulatta]
gi|410218060|gb|JAA06249.1| RAE1 RNA export 1 homolog [Pan troglodytes]
gi|410254868|gb|JAA15401.1| RAE1 RNA export 1 homolog [Pan troglodytes]
gi|410295190|gb|JAA26195.1| RAE1 RNA export 1 homolog [Pan troglodytes]
gi|410351227|gb|JAA42217.1| RAE1 RNA export 1 homolog [Pan troglodytes]
gi|410351229|gb|JAA42218.1| RAE1 RNA export 1 homolog [Pan troglodytes]
Length = 368
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|426392236|ref|XP_004062462.1| PREDICTED: mRNA export factor isoform 1 [Gorilla gorilla gorilla]
gi|426392238|ref|XP_004062463.1| PREDICTED: mRNA export factor isoform 2 [Gorilla gorilla gorilla]
Length = 368
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|195057312|ref|XP_001995237.1| GH23041 [Drosophila grimshawi]
gi|193899443|gb|EDV98309.1| GH23041 [Drosophila grimshawi]
Length = 347
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
FG A TN+ EV+ PP DSVS+L FSP N L+A SWDN
Sbjct: 2 FGPAQTTTNRM--NDFEVASPPDDSVSALEFSPSTLPKNYLIAGSWDN 47
>gi|354478561|ref|XP_003501483.1| PREDICTED: mRNA export factor [Cricetulus griseus]
gi|344254907|gb|EGW11011.1| mRNA export factor [Cricetulus griseus]
Length = 368
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTAT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|343960741|dbj|BAK61960.1| mRNA-associated protein mrnp 41 [Pan troglodytes]
Length = 368
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|38570361|gb|AAR24621.1| migration-inducing gene 14 [Homo sapiens]
Length = 352
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 2 FGSATT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 48
>gi|166218821|sp|Q7ZWF0.2|RAE1L_DANRE RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|41351131|gb|AAH65853.1| RAE1 RNA export 1 homolog (S. pombe) [Danio rerio]
Length = 368
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 2 ATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ ++ NP K +EV+ PP DS+S L FSP N L+ SW N
Sbjct: 16 GVFGSTTTDSH-NPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWAN 64
>gi|126302795|ref|XP_001368922.1| PREDICTED: mRNA export factor-like [Monodelphis domestica]
Length = 368
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTAT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|328869597|gb|EGG17974.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
Length = 329
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
K IE+ QPP+D VS L F+PK + + A SWD
Sbjct: 6 KDIELPQPPTDGVSCLKFAPKGSFIAAGSWDK 37
>gi|317419003|emb|CBN81041.1| mRNA export factor [Dicentrarchus labrax]
Length = 369
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
Query: 4 FGAAAVAT-------NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FGA + NP K +EV+ PP DS+S L FSP N L+ SW N
Sbjct: 10 FGAGGTGVFGNTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWAN 64
>gi|195380633|ref|XP_002049075.1| GJ20959 [Drosophila virilis]
gi|194143872|gb|EDW60268.1| GJ20959 [Drosophila virilis]
Length = 349
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA-----NILVATSWDN 48
FG A TN+ EV+ PP DSVS+L FSP N L+A SWDN
Sbjct: 2 FGPAQTTTNRM--NDFEVASPPDDSVSALEFSPSTLQVPKNFLIAGSWDN 49
>gi|395509212|ref|XP_003758896.1| PREDICTED: pulmonary surfactant-associated protein A-like,
partial [Sarcophilus harrisii]
Length = 439
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 6 AAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 21 GSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 66
>gi|406603802|emb|CCH44723.1| Vegetative incompatibility protein [Wickerhamomyces ciferrii]
Length = 360
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 10 ATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
AT + I V PP DS+S L FSP+A++L +SWD +
Sbjct: 18 ATEADLQNDIIVQNPPEDSISDLAFSPQADLLSVSSWDKK 57
>gi|159479928|ref|XP_001698038.1| mRNA export protein [Chlamydomonas reinhardtii]
gi|158273837|gb|EDO99623.1| mRNA export protein [Chlamydomonas reinhardtii]
Length = 352
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 4 FGAAAVAT-NQNPNKSIEVSQPPS-DSVSSLCFSPKANILVATSWDN 48
FGA A A NPN +EV P DS+SSL FSP ++ TSW+N
Sbjct: 2 FGAQAQAKPAHNPNGDLEVPAPGDMDSISSLTFSPTSDFFAVTSWNN 48
>gi|169604270|ref|XP_001795556.1| hypothetical protein SNOG_05146 [Phaeosphaeria nodorum SN15]
gi|160706534|gb|EAT87537.2| hypothetical protein SNOG_05146 [Phaeosphaeria nodorum SN15]
Length = 348
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 1 MATFGA----AAVATNQNPNKSIEV--SQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA FGA +A +T + +K +E+ Q PSDS+S L FSP ++L SWD +
Sbjct: 1 MALFGAQPAASASSTTGDTSKDVEIPAGQLPSDSISDLQFSPTHDLLAVASWDKK 55
>gi|348510341|ref|XP_003442704.1| PREDICTED: mRNA export factor-like [Oreochromis niloticus]
Length = 368
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 13 QNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
NP K +EV+ PP DS+S L FSP N L+ SW N
Sbjct: 26 HNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWAN 64
>gi|358058590|dbj|GAA95553.1| hypothetical protein E5Q_02208 [Mixia osmundae IAM 14324]
Length = 700
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 9/53 (16%)
Query: 1 MATFGAAAVATNQNPNKSI----EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG A N NK++ E++ PP+DSV++L + P ++L ++WDNQ
Sbjct: 356 MSYFGGGA-----NLNKAVVNDVELTSPPNDSVTALSWCPTQDLLAVSAWDNQ 403
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 1 MATFGAA--AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG+ AT + +E+ P+D+ S L +SP A++L +SWDNQ
Sbjct: 1 MSFFGSQLNKPATTLVTDTDVELQNGPTDTASCLAWSPTADLLAISSWDNQ 51
>gi|291415675|ref|XP_002724076.1| PREDICTED: RAE1 (RNA export 1, S.pombe) homolog [Oryctolagus
cuniculus]
Length = 368
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DSV L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSVGCLSFSPPTLPGNFLIAGSWAN 64
>gi|431894522|gb|ELK04322.1| mRNA export factor [Pteropus alecto]
Length = 658
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
N NP K IEV+ P DS+ L F+P + N L+A SW N
Sbjct: 312 NHNPMKDIEVTSSPDDSIGCLSFNPPTLQGNFLIAGSWAN 351
>gi|2231592|gb|AAC28127.1| mRNA-associated protein mrnp41 [Homo sapiens]
Length = 368
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+A N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSATT-DNHNPMKGIEVTSSPDDSIGCLSFSPPTLPGNSLIAGSWAN 64
>gi|11071723|emb|CAC14665.1| RAE1 [Chironomus tentans]
Length = 349
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSPKA----NILVATSWD 47
NP K IEV+ PP D++S++ FSP N L+A SWD
Sbjct: 9 NPMKDIEVTAPPDDTISAMKFSPATSLPKNFLLAGSWD 46
>gi|226468272|emb|CAX69813.1| mRNA export factor [Schistosoma japonicum]
Length = 365
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 2 ATFGAAAVATNQN---PNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
+ F +A +A+N+ K+ EV PP D+VS L FSP++ L ATSWDN+
Sbjct: 10 SVFNSANIASNKTLSAVQKTAEVQSPPGDTVSCLRFSPESVQTTFLAATSWDNR 63
>gi|355715119|gb|AES05232.1| RAE1 RNA export 1-like protein [Mustela putorius furo]
Length = 348
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ + N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTST-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|301759477|ref|XP_002915571.1| PREDICTED: mRNA export factor-like [Ailuropoda melanoleuca]
gi|281348444|gb|EFB24028.1| hypothetical protein PANDA_003590 [Ailuropoda melanoleuca]
Length = 368
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ + N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTST-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|73992619|ref|XP_543066.2| PREDICTED: mRNA export factor [Canis lupus familiaris]
gi|410953482|ref|XP_003983399.1| PREDICTED: mRNA export factor [Felis catus]
Length = 368
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ + N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTST-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|50405887|ref|XP_456584.1| DEHA2A06006p [Debaryomyces hansenii CBS767]
gi|49652248|emb|CAG84540.1| DEHA2A06006p [Debaryomyces hansenii CBS767]
Length = 370
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I ++ PP DS+S + FSP+ ++LVA SWD +
Sbjct: 27 ITINNPPEDSISDIAFSPQQDLLVAASWDKK 57
>gi|76154271|gb|AAX25760.2| SJCHGC03724 protein [Schistosoma japonicum]
Length = 175
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 2 ATFGAAAVATNQNPN---KSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
+ F +A +A+N+ + K+ EV PP D+VS L FSP++ L ATSWDN+
Sbjct: 10 SVFNSANIASNKTLSAVQKTAEVQSPPGDTVSCLRFSPESVQTTFLAATSWDNR 63
>gi|351697822|gb|EHB00741.1| mRNA export factor [Heterocephalus glaber]
Length = 368
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N LVA SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLVAGSWAN 64
>gi|149030039|gb|EDL85131.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_c [Rattus
norvegicus]
Length = 99
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDNQ 49
N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAND 65
>gi|444730821|gb|ELW71194.1| mRNA export factor [Tupaia chinensis]
Length = 504
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 149 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 195
>gi|432110183|gb|ELK33959.1| mRNA export factor [Myotis davidii]
Length = 399
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 49 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 95
>gi|387593273|gb|EIJ88297.1| hypothetical protein NEQG_01741 [Nematocida parisii ERTm3]
gi|387596015|gb|EIJ93637.1| hypothetical protein NEPG_01209 [Nematocida parisii ERTm1]
Length = 383
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 21 VSQPPSDSVSSLCFSPKANILVATSWDN 48
V QPP+DS+SS+ +SP ++IL A SWD
Sbjct: 23 VQQPPTDSISSIKYSPMSDILTACSWDG 50
>gi|296200793|ref|XP_002747754.1| PREDICTED: mRNA export factor [Callithrix jacchus]
gi|403282457|ref|XP_003932665.1| PREDICTED: mRNA export factor [Saimiri boliviensis boliviensis]
Length = 368
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|149734132|ref|XP_001490076.1| PREDICTED: mRNA export factor-like [Equus caballus]
Length = 368
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|417399794|gb|JAA46883.1| Putative mitotic spindle checkpoint protein bub3 wd repeat
superfamily [Desmodus rotundus]
Length = 368
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|157427748|ref|NP_001098766.1| mRNA export factor [Sus scrofa]
gi|166218412|sp|A5GFN6.1|RAEL1_PIG RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|147223338|emb|CAN13252.1| RAE1 RNA export 1 homolog (S. pombe) [Sus scrofa]
Length = 368
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|76096356|ref|NP_001028880.1| mRNA export factor [Rattus norvegicus]
gi|114154818|sp|Q3SWS8.1|RAE1L_RAT RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|74356263|gb|AAI04722.1| RAE1 RNA export 1 homolog (S. pombe) [Rattus norvegicus]
gi|76780256|gb|AAI05759.1| RAE1 RNA export 1 homolog (S. pombe) [Rattus norvegicus]
gi|149030037|gb|EDL85129.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_a [Rattus
norvegicus]
Length = 368
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|149030038|gb|EDL85130.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_b [Rattus
norvegicus]
Length = 307
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|62751640|ref|NP_001015585.1| mRNA export factor [Bos taurus]
gi|75070022|sp|Q5E9A4.1|RAE1L_BOVIN RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|59858397|gb|AAX09033.1| RAE1 (RNA export 1, S.pombe) homolog [Bos taurus]
gi|83406107|gb|AAI11249.1| RAE1 RNA export 1 homolog (S. pombe) [Bos taurus]
gi|296481098|tpg|DAA23213.1| TPA: mRNA export factor [Bos taurus]
Length = 368
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|26330564|dbj|BAC29012.1| unnamed protein product [Mus musculus]
Length = 341
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|28201956|ref|NP_780321.1| mRNA export factor [Mus musculus]
gi|81914027|sp|Q8C570.1|RAE1L_MOUSE RecName: Full=mRNA export factor; AltName: Full=Rae1 protein
homolog; AltName: Full=mRNA-associated protein mrnp 41
gi|26347957|dbj|BAC37627.1| unnamed protein product [Mus musculus]
gi|37590745|gb|AAH59051.1| RAE1 RNA export 1 homolog (S. pombe) [Mus musculus]
gi|74140186|dbj|BAE33805.1| unnamed protein product [Mus musculus]
gi|148674671|gb|EDL06618.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_c [Mus
musculus]
Length = 368
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|344296533|ref|XP_003419961.1| PREDICTED: mRNA export factor-like [Loxodonta africana]
Length = 368
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|426241225|ref|XP_004014492.1| PREDICTED: mRNA export factor [Ovis aries]
gi|440912497|gb|ELR62059.1| mRNA export factor [Bos grunniens mutus]
Length = 368
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|74222102|dbj|BAE26867.1| unnamed protein product [Mus musculus]
Length = 368
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|395829246|ref|XP_003787771.1| PREDICTED: mRNA export factor isoform 1 [Otolemur garnettii]
gi|395829248|ref|XP_003787772.1| PREDICTED: mRNA export factor isoform 2 [Otolemur garnettii]
Length = 368
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|148674672|gb|EDL06619.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_d [Mus
musculus]
Length = 334
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 45 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 91
>gi|37805446|gb|AAH60072.1| Rae1 protein [Mus musculus]
Length = 224
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|348555756|ref|XP_003463689.1| PREDICTED: mRNA export factor-like [Cavia porcellus]
Length = 368
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 18 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64
>gi|148674670|gb|EDL06617.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_b [Mus
musculus]
Length = 358
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 35 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 81
>gi|388855949|emb|CCF50524.1| related to GLE2-required for nuclear pore complex structure and
function [Ustilago hordei]
Length = 399
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWDN 48
EV+ PSD+VS L FSP A+ L A+SWDN
Sbjct: 42 EVAPAPSDTVSCLSFSPTADFLAASSWDN 70
>gi|148674669|gb|EDL06616.1| RAE1 RNA export 1 homolog (S. pombe), isoform CRA_a [Mus
musculus]
Length = 254
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ N NP K IEV+ P DS+ L FSP N L+A SW N
Sbjct: 48 FGSTTT-DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 94
>gi|443920553|gb|ELU40456.1| Poly(A)+ RNA export protein [Rhizoctonia solani AG-1 IA]
Length = 307
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K +E+ PP DS+S L FSP A+ L SW+N+
Sbjct: 18 KDVELVDPPGDSISCLDFSPTADYLAVGSWNNE 50
>gi|358332006|dbj|GAA50739.1| mRNA export factor [Clonorchis sinensis]
Length = 377
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDNQ 49
T + K+ EV PPSD+VS L FSP + L ATSWDN+
Sbjct: 21 TGIDAQKTAEVQCPPSDTVSCLRFSPETLQTTFLAATSWDNR 62
>gi|260798314|ref|XP_002594145.1| hypothetical protein BRAFLDRAFT_73566 [Branchiostoma floridae]
gi|229279378|gb|EEN50156.1| hypothetical protein BRAFLDRAFT_73566 [Branchiostoma floridae]
Length = 340
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
K IEV+ PP DSV++L FSP A LV+ SWDN
Sbjct: 2 KDIEVASPPDDSVAALAFSPAATATTFLVSGSWDN 36
>gi|145239047|ref|XP_001392170.1| poly(A)+ RNA export protein [Aspergillus niger CBS 513.88]
gi|134076673|emb|CAK45204.1| unnamed protein product [Aspergillus niger]
gi|350629364|gb|EHA17737.1| hypothetical protein ASPNIDRAFT_38648 [Aspergillus niger ATCC
1015]
Length = 359
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 2 ATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
AT A T + +K + ++QPP DS+S L FSP + L SWD +
Sbjct: 10 ATTSAGQTNTTGDISKDVALNQPPEDSISDLRFSPASEHLAVASWDKK 57
>gi|378755843|gb|EHY65869.1| hypothetical protein NERG_01476 [Nematocida sp. 1 ERTm2]
Length = 383
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 21 VSQPPSDSVSSLCFSPKANILVATSWDN 48
V QPP+DS+SS+ +SP ++IL A SWD
Sbjct: 23 VQQPPTDSISSIKYSPVSDILTACSWDG 50
>gi|195429246|ref|XP_002062674.1| GK19577 [Drosophila willistoni]
gi|194158759|gb|EDW73660.1| GK19577 [Drosophila willistoni]
Length = 348
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP-----KANILVATSWDN 48
FGA N EV+ PP DSVS+L FSP + N L+A SWDN
Sbjct: 2 FGATQSTNRMN---DFEVASPPDDSVSALEFSPSTMQMQKNFLIAGSWDN 48
>gi|41055915|ref|NP_957292.1| mRNA export factor [Danio rerio]
gi|29436458|gb|AAH49445.1| RAE1 RNA export 1 homolog (S. pombe) [Danio rerio]
Length = 368
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 2 ATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG+ ++ NP K +EV+ PP +S+S L FSP N L+ SW N
Sbjct: 16 GVFGSTTTDSH-NPMKDVEVTSPPDESISCLAFSPPTMPGNFLIGGSWAN 64
>gi|358370954|dbj|GAA87564.1| nuclear pore complex protein [Aspergillus kawachii IFO 4308]
Length = 359
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 2 ATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
AT A T + +K + ++QPP DS+S L FSP + L SWD +
Sbjct: 10 ATTSAGQTNTTGDISKDVALNQPPEDSISDLRFSPASEHLAVASWDKK 57
>gi|50553780|ref|XP_504301.1| YALI0E23265p [Yarrowia lipolytica]
gi|49650170|emb|CAG79900.1| YALI0E23265p [Yarrowia lipolytica CLIB122]
Length = 366
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 21 VSQPPSDSVSSLCFSPKANILVATSWDNQ 49
++ PP DSVS +CFSP+A L SWD +
Sbjct: 35 LANPPEDSVSDICFSPQAEFLSVASWDKK 63
>gi|401882720|gb|EJT46964.1| hypothetical protein A1Q1_04207 [Trichosporon asahii var. asahii
CBS 2479]
Length = 754
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKA-NILVATSWDN 48
K IE+ QPP++SVS + FSP +IL SWDN
Sbjct: 11 KDIELVQPPTESVSKILFSPGGQSILAVASWDN 43
>gi|357116503|ref|XP_003560020.1| PREDICTED: mitotic checkpoint protein BUB3-like [Brachypodium
distachyon]
Length = 357
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWD 47
E+S PP D VS+LCFS +N L+ +SWD
Sbjct: 28 ELSHPPRDGVSNLCFSRHSNRLLVSSWD 55
>gi|85112981|ref|XP_964446.1| hypothetical protein NCU09744 [Neurospora crassa OR74A]
gi|28926228|gb|EAA35210.1| hypothetical protein NCU09744 [Neurospora crassa OR74A]
Length = 353
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPK-ANILVATSWDN 48
P+ EVSQPPSD++S++ F+P N L+ +SWD
Sbjct: 3 PSTQFEVSQPPSDAISAVIFAPDNTNRLLVSSWDR 37
>gi|336470827|gb|EGO58988.1| hypothetical protein NEUTE1DRAFT_128482 [Neurospora tetrasperma
FGSC 2508]
gi|350291894|gb|EGZ73089.1| WD40 repeat-like protein [Neurospora tetrasperma FGSC 2509]
Length = 353
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPK-ANILVATSWDN 48
P+ EVSQPPSD++S++ F+P N L+ +SWD
Sbjct: 3 PSTQFEVSQPPSDAISAVIFAPDNTNRLLVSSWDR 37
>gi|409042387|gb|EKM51871.1| hypothetical protein PHACADRAFT_199377 [Phanerochaete carnosa
HHB-10118-sp]
Length = 365
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWD 47
++V+ PP+DSVS L FSP A+ + SWD
Sbjct: 35 VQVADPPTDSVSGLAFSPTADFIAVGSWD 63
>gi|325189401|emb|CCA23892.1| WD domaincontaining protein putative [Albugo laibachii Nc14]
Length = 343
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1 MATFGAAAVATNQ--NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FGAA + NPN + Q +D V SL +S +N LVA SWDN
Sbjct: 1 MSAFGAATSSATAYPNPNSDYTIPQTINDGVQSLSWSSTSNTLVAGSWDNH 51
>gi|296410828|ref|XP_002835137.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627912|emb|CAZ79258.1| unnamed protein product [Tuber melanosporum]
Length = 358
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T + +K +EV+ PP DSVS L FS ++ L +SWD++
Sbjct: 19 TQGDLSKDVEVTSPPEDSVSDLSFSSQSEHLAVSSWDSK 57
>gi|150865022|ref|XP_001384071.2| hypothetical protein PICST_77577 [Scheffersomyces stipitis CBS
6054]
gi|149386278|gb|ABN66042.2| nuclear pore protein [Scheffersomyces stipitis CBS 6054]
Length = 365
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I V+ PP DS++ L FSP+ ++L A SWD +
Sbjct: 23 ITVNNPPDDSITDLSFSPQQDLLAAASWDRK 53
>gi|396461523|ref|XP_003835373.1| similar to Poly(A)+ RNA export protein [Leptosphaeria maculans
JN3]
gi|312211924|emb|CBX92008.1| similar to Poly(A)+ RNA export protein [Leptosphaeria maculans
JN3]
Length = 363
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 1 MATFG-----AAAVATNQNPNKSIEVS--QPPSDSVSSLCFSPKANILVATSWDNQ 49
MA FG AA+ +T + +K +EV+ Q PSDS+S L FSP A+ L SWD +
Sbjct: 1 MALFGQASATAASSSTTGDTSKDVEVARDQLPSDSISDLAFSPTADFLAVGSWDKK 56
>gi|393909287|gb|EFO22340.2| nucleoporin-17 [Loa loa]
Length = 371
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKAN----ILVATSWD 47
F + T+QNP IEV PP D+V +L F+P+ +LV+ SWD
Sbjct: 16 FSSGTANTSQNPLNDIEVPSPPDDTVEALKFNPQIAGQPVLLVSGSWD 63
>gi|170587820|ref|XP_001898672.1| Hypothetical 41.4 kDa Trp-Asp repeats containing protein F10G8.3
inchromosome I [Brugia malayi]
gi|158593942|gb|EDP32536.1| Hypothetical 41.4 kDa Trp-Asp repeats containing protein F10G8.3
inchromosome I, putative [Brugia malayi]
Length = 371
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKAN----ILVATSWD 47
F + T+QNP IEV PP D+V +L F+P+ +LV+ SWD
Sbjct: 16 FSSGTANTSQNPLNDIEVPSPPDDTVEALKFNPQIAGQPVLLVSGSWD 63
>gi|281209396|gb|EFA83564.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
Length = 324
Score = 38.5 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWD 47
E+ PP D +SSL F P+ N+L+ TSWD
Sbjct: 6 ELRLPPQDGISSLNFIPQTNLLLVTSWD 33
>gi|425774393|gb|EKV12701.1| Nuclear pore complex protein (SonA), putative [Penicillium
digitatum PHI26]
gi|425776836|gb|EKV15035.1| Nuclear pore complex protein (SonA), putative [Penicillium
digitatum Pd1]
Length = 361
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T + +K + ++ PP D +S LCFSP + L SWD +
Sbjct: 18 TTGDISKDVALNTPPEDGISDLCFSPTSEHLAVASWDKK 56
>gi|32399037|emb|CAD98277.1| mRNA export protein, probable [Cryptosporidium parvum]
Length = 353
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
N N SIE+S P+DS+S +C+S +++L A+SWD
Sbjct: 14 NVNNSIELSNCPNDSISKVCWSMNSSLLAASSWD 47
>gi|27819913|gb|AAM49937.2| LD40776p, partial [Drosophila melanogaster]
Length = 360
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
FGA N EV+ PP DSVS+L FSP + N LVA SWD
Sbjct: 16 FGATQSTNRMN---DFEVASPPDDSVSALEFSPSTVQKNFLVAGSWD 59
>gi|402593841|gb|EJW87768.1| nucleoporin-17 [Wuchereria bancrofti]
Length = 371
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKAN----ILVATSWD 47
F ++ T+QNP IEV PP D+V +L F+P+ +LV+ SWD
Sbjct: 16 FSSSTANTSQNPLNDIEVPSPPDDTVEALKFNPQIAGQPVLLVSGSWD 63
>gi|194881966|ref|XP_001975084.1| GG20758 [Drosophila erecta]
gi|195486417|ref|XP_002091501.1| GE13690 [Drosophila yakuba]
gi|190658271|gb|EDV55484.1| GG20758 [Drosophila erecta]
gi|194177602|gb|EDW91213.1| GE13690 [Drosophila yakuba]
Length = 346
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
FGA N EV+ PP DSVS+L FSP + N LVA SWD
Sbjct: 2 FGATQSTNRMN---DFEVASPPDDSVSALEFSPSTVQKNFLVAGSWD 45
>gi|20130217|ref|NP_611597.1| Rae1 [Drosophila melanogaster]
gi|195346497|ref|XP_002039794.1| GM15702 [Drosophila sechellia]
gi|7291315|gb|AAF46745.1| Rae1 [Drosophila melanogaster]
gi|194135143|gb|EDW56659.1| GM15702 [Drosophila sechellia]
gi|220944446|gb|ACL84766.1| Rae1-PA [synthetic construct]
gi|220954234|gb|ACL89660.1| Rae1-PA [synthetic construct]
Length = 346
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWD 47
FGA N EV+ PP DSVS+L FSP + N LVA SWD
Sbjct: 2 FGATQSTNRMN---DFEVASPPDDSVSALEFSPSTVQKNFLVAGSWD 45
>gi|260940479|ref|XP_002614539.1| hypothetical protein CLUG_05317 [Clavispora lusitaniae ATCC
42720]
gi|238851725|gb|EEQ41189.1| hypothetical protein CLUG_05317 [Clavispora lusitaniae ATCC
42720]
Length = 366
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 1 MATFGAA-----AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG+ + AT + I V+ P DSVS L FSP++ +L SWD++
Sbjct: 1 MSAFGSTLSQPTSAATGKELINDITVANGPEDSVSDLAFSPQSELLAVASWDHK 54
>gi|360045042|emb|CCD82590.1| mRNA export protein rae1-related [Schistosoma mansoni]
Length = 365
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
K+ EV PP D+VS L FSP++ L ATSWDN+
Sbjct: 28 KTAEVQSPPGDTVSCLRFSPESMQTTFLAATSWDNR 63
>gi|224119256|ref|XP_002331266.1| predicted protein [Populus trichocarpa]
gi|222873691|gb|EEF10822.1| predicted protein [Populus trichocarpa]
Length = 114
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATS 45
M+ FGA A TN NPNKSIEV Q PSDSVSSL FSPK N VA S
Sbjct: 71 MSAFGATAT-TNTNPNKSIEVLQRPSDSVSSLSFSPKTNFSVAIS 114
>gi|146416315|ref|XP_001484127.1| hypothetical protein PGUG_03508 [Meyerozyma guilliermondii ATCC
6260]
Length = 367
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 7 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
A AT + + V+ PP DSVS L FSP ++L SWD +
Sbjct: 13 ATAATGKELLNDVTVNNPPEDSVSDLSFSPTQDMLAVASWDKK 55
>gi|289741815|gb|ADD19655.1| mRNA export protein [Glossina morsitans morsitans]
Length = 349
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 4 FGAAAVA-TNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FG +++ T+ N EV PP DSVS+L FSP + N L+A SWD+
Sbjct: 2 FGQSSLGSTSTNRMNDFEVVAPPEDSVSALEFSPATVQQNFLIAGSWDS 50
>gi|256082128|ref|XP_002577313.1| mRNA export protein rae1-related [Schistosoma mansoni]
Length = 339
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49
K+ EV PP D+VS L FSP++ L ATSWDN+
Sbjct: 28 KTAEVQSPPGDTVSCLRFSPESMQTTFLAATSWDNR 63
>gi|194755910|ref|XP_001960222.1| GF11632 [Drosophila ananassae]
gi|190621520|gb|EDV37044.1| GF11632 [Drosophila ananassae]
Length = 336
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 19 IEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
EV+ PP DS+S+L FSP + N L+A SWDN
Sbjct: 4 FEVASPPDDSISALEFSPNTLQKNFLIAGSWDN 36
>gi|190347178|gb|EDK39410.2| hypothetical protein PGUG_03508 [Meyerozyma guilliermondii ATCC
6260]
Length = 367
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 7 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
A AT + + V+ PP DSVS L FSP ++L SWD +
Sbjct: 13 ATAATGKELLNDVTVNNPPEDSVSDLSFSPTQDMLAVASWDKK 55
>gi|336263627|ref|XP_003346593.1| hypothetical protein SMAC_04766 [Sordaria macrospora k-hell]
gi|380090488|emb|CCC11784.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 353
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPK-ANILVATSWDN 48
P+ EVSQPPSD +S++ F+P N L+ +SWD
Sbjct: 3 PSTQFEVSQPPSDVISAVVFAPDNTNRLLVSSWDR 37
>gi|344232609|gb|EGV64482.1| WD40 repeat-like protein [Candida tenuis ATCC 10573]
Length = 370
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 10 ATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
AT Q I ++ PP DSVS L FS + ++L A SWD +
Sbjct: 20 ATGQELVNDISINNPPEDSVSDLSFSSQQDLLAAASWDKK 59
>gi|390600456|gb|EIN09851.1| Poly(A)+ RNA export protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 350
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 24 PPSDSVSSLCFSPKANILVATSWDN 48
PP+DSVSS+ FSP+ + L SWDN
Sbjct: 22 PPTDSVSSMAFSPQGDYLAVGSWDN 46
>gi|453080312|gb|EMF08363.1| WD40 repeat-like protein [Mycosphaerella populorum SO2202]
Length = 360
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T + K + V+ PP DS+S+L FSP ++ L +SWD +
Sbjct: 17 TQGDLTKDVTVNDPPEDSISALSFSPASDHLSVSSWDKK 55
>gi|302829064|ref|XP_002946099.1| mRNA export protein-like protein [Volvox carteri f. nagariensis]
gi|300268914|gb|EFJ53094.1| mRNA export protein-like protein [Volvox carteri f. nagariensis]
Length = 353
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 13 QNPNKSIEVSQPPS-DSVSSLCFSPKANILVATSWDN 48
NPN +EV P DS+SSL FSP ++ TSW+N
Sbjct: 13 HNPNGDLEVPAPADLDSISSLTFSPASDFFAVTSWNN 49
>gi|357017489|gb|AET50773.1| hypothetical protein [Eimeria tenella]
Length = 327
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 20 EVSQPPSDSVSSLCFSPK--ANILVATSWDN 48
E+ P D++SS+CFSP N+L A+SWDN
Sbjct: 4 ELRPEPRDTISSICFSPNHAKNVLAASSWDN 34
>gi|340960411|gb|EGS21592.1| hypothetical protein CTHT_0034550 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 350
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
P EV+QPP+D++S++ F+P+A + +SWD
Sbjct: 3 PATQFEVAQPPNDAISAIDFAPEAPRFLVSSWDK 36
>gi|195585494|ref|XP_002082516.1| GD25180 [Drosophila simulans]
gi|194194525|gb|EDX08101.1| GD25180 [Drosophila simulans]
Length = 173
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSP---KANILVATSWDN 48
FGA N EV+ PP DSVS+L FSP + N LVA SWD+
Sbjct: 2 FGATQSTNRMN---DFEVASPPDDSVSALEFSPSTVQKNFLVAGSWDS 46
>gi|242785867|ref|XP_002480686.1| nuclear pore complex protein (SonA), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720833|gb|EED20252.1| nuclear pore complex protein (SonA), putative [Talaromyces
stipitatus ATCC 10500]
Length = 366
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K + ++ PP DS+S L FSP +N L +SWD +
Sbjct: 26 KDVALNSPPEDSISDLAFSPVSNHLAVSSWDKK 58
>gi|301101952|ref|XP_002900064.1| WD domain-containing protein, putative [Phytophthora infestans
T30-4]
gi|262102639|gb|EEY60691.1| WD domain-containing protein, putative [Phytophthora infestans
T30-4]
Length = 350
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 3 TFGAAAVATNQ-NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
+FG A A NPN + + +D + L +SP +N+LV+ SWDN
Sbjct: 2 SFGQPAQAGGYLNPNNDYTIGETINDGIQDLAWSPTSNVLVSGSWDN 48
>gi|326432506|gb|EGD78076.1| mitotic checkpoint protein BUB3 [Salpingoeca sp. ATCC 50818]
Length = 323
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWDN 48
E+ PP D +SS+ FSP +N+L+ SWD
Sbjct: 5 ELVSPPQDGISSVVFSPTSNLLLVASWDK 33
>gi|443916526|gb|ELU37574.1| Poly(A)+ RNA export protein [Rhizoctonia solani AG-1 IA]
Length = 221
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG+ T K E+ PP+DS+S + FSP A+ L SW+++
Sbjct: 1 MSIFGSNPSTTEV---KDTELVDPPNDSISCMSFSPTADYLAVGSWNHE 46
>gi|330814869|ref|XP_003291452.1| WD40 repeat-containing protein [Dictyostelium purpureum]
gi|325078379|gb|EGC32034.1| WD40 repeat-containing protein [Dictyostelium purpureum]
Length = 334
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWDN 48
E+ QPPSD +SS+ F P + L+ TSWDN
Sbjct: 10 ELRQPPSDGISSVNFCPYSVNLLVTSWDN 38
>gi|237835359|ref|XP_002366977.1| mitotic checkpoint protein BUB3, putative [Toxoplasma gondii
ME49]
gi|211964641|gb|EEA99836.1| mitotic checkpoint protein BUB3, putative [Toxoplasma gondii
ME49]
gi|221485492|gb|EEE23773.1| mitotic checkpoint protein BUB3, putative [Toxoplasma gondii GT1]
gi|221506348|gb|EEE31983.1| mitotic checkpoint protein BUB3, putative [Toxoplasma gondii VEG]
Length = 332
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 18 SIEVSQPPSDSVSSLCFSPK--ANILVATSWD 47
SI++ P DS+SSLC++P +IL ATSWD
Sbjct: 2 SIDLRHEPRDSISSLCYAPSHGKSILAATSWD 33
>gi|342882090|gb|EGU82844.1| hypothetical protein FOXB_06647 [Fusarium oxysporum Fo5176]
Length = 358
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 5 GAAAVATNQNP----NKSIEVSQPPSDSVSSLCFSPKAN---ILVATSWDNQ 49
GA+A AT N + + +S PP+D++S L FSP N L +SWDN+
Sbjct: 7 GASAAATTSNTVGDLKQDVALSDPPTDTISDLSFSPAPNGPDFLAISSWDNK 58
>gi|344300148|gb|EGW30488.1| nucleoporin GLE2 [Spathaspora passalidarum NRRL Y-27907]
Length = 371
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 7 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
+A A Q I ++ PP+D+++ + FSP+ +L +SWD +
Sbjct: 15 SATANGQELINDITINNPPTDTITDIAFSPQQELLAVSSWDKK 57
>gi|255078652|ref|XP_002502906.1| predicted protein [Micromonas sp. RCC299]
gi|226518172|gb|ACO64164.1| predicted protein [Micromonas sp. RCC299]
Length = 343
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWD 47
+E+S PP+D V+SL F + +L+ATSWD
Sbjct: 6 LELSSPPTDGVTSLRFGDDSGLLLATSWD 34
>gi|171690808|ref|XP_001910329.1| hypothetical protein [Podospora anserina S mat+]
gi|170945352|emb|CAP71464.1| unnamed protein product [Podospora anserina S mat+]
Length = 348
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSP-KANILVATSWDNQ 49
P+ E+ QPP+D+VSSL FSP ++ L+ +SWD
Sbjct: 3 PSTQFELPQPPTDAVSSLVFSPDSSHRLLVSSWDKH 38
>gi|212543149|ref|XP_002151729.1| nuclear pore complex protein (SonA), putative [Talaromyces
marneffei ATCC 18224]
gi|210066636|gb|EEA20729.1| nuclear pore complex protein (SonA), putative [Talaromyces
marneffei ATCC 18224]
Length = 555
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K + ++ PP DS+S L FSP +N L SWD +
Sbjct: 26 KDVALNSPPEDSISDLAFSPVSNHLAVASWDKK 58
>gi|348676737|gb|EGZ16554.1| hypothetical protein PHYSODRAFT_360329 [Phytophthora sojae]
Length = 374
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 3 TFGAAAVATNQ-NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
+FG A A NPN + + +D + L +SP +N+LV+ SWDN
Sbjct: 2 SFGQPAQAGGYLNPNNDYTIGETINDGIQDLAWSPTSNVLVSGSWDN 48
>gi|123438212|ref|XP_001309893.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891639|gb|EAX96963.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 347
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
SI + PP +++S L FSP N + A+SWD
Sbjct: 2 SITLDNPPDETISDLAFSPSGNYIAASSWDG 32
>gi|320169062|gb|EFW45961.1| RAE1 [Capsaspora owczarzaki ATCC 30864]
Length = 362
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 7 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPK--ANILVATSWD 47
AAV NPN +E++ P DSVSS+ F P + LV +WD
Sbjct: 4 AAVGPPHNPNNDLEMANAPDDSVSSMRFCPSDTLDYLVVGAWD 46
>gi|254574082|ref|XP_002494150.1| Component of the nuclear pore complex [Komagataella pastoris
GS115]
gi|238033949|emb|CAY71971.1| Component of the nuclear pore complex [Komagataella pastoris
GS115]
gi|328354031|emb|CCA40428.1| Vegetative incompatibility protein HET-E-1 [Komagataella pastoris
CBS 7435]
Length = 355
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 10 ATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T Q+ + V P DS+S L FSP+A +L SWD +
Sbjct: 14 GTVQDLQNDVVVGNGPEDSISDLAFSPQAELLAVASWDKK 53
>gi|125807355|ref|XP_001360375.1| GA22080 [Drosophila pseudoobscura pseudoobscura]
gi|195149804|ref|XP_002015845.1| GL11275 [Drosophila persimilis]
gi|54635547|gb|EAL24950.1| GA22080 [Drosophila pseudoobscura pseudoobscura]
gi|194109692|gb|EDW31735.1| GL11275 [Drosophila persimilis]
Length = 347
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA----NILVATSWD 47
FGA + N EV+ PP DSVS+L FSP N L+A SWD
Sbjct: 2 FGATQSSNRMN---DFEVASPPDDSVSALEFSPSTLPSKNFLIAGSWD 46
>gi|18402300|ref|NP_566644.1| cell cycle arrest protein BUB3 [Arabidopsis thaliana]
gi|9294423|dbj|BAB02543.1| mitotic checkpoint protein [Arabidopsis thaliana]
gi|21593004|gb|AAM64953.1| mitotic checkpoint protein, putative [Arabidopsis thaliana]
gi|28393726|gb|AAO42274.1| putative mitotic checkpoint protein [Arabidopsis thaliana]
gi|29824353|gb|AAP04137.1| putative mitotic checkpoint protein [Arabidopsis thaliana]
gi|332642742|gb|AEE76263.1| cell cycle arrest protein BUB3 [Arabidopsis thaliana]
Length = 340
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T P+ E+S PPSD +S+L FS ++ L+ +SWD +
Sbjct: 2 TTVTPSAGRELSNPPSDGISNLRFSNNSDHLLVSSWDKR 40
>gi|156846033|ref|XP_001645905.1| hypothetical protein Kpol_1045p33 [Vanderwaltozyma polyspora DSM
70294]
gi|156116575|gb|EDO18047.1| hypothetical protein Kpol_1045p33 [Vanderwaltozyma polyspora DSM
70294]
Length = 361
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 3 TFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILV-ATSWDNQ 49
T G + +AT+ + I ++ P DS+S + FSP+ + L A+SWDN+
Sbjct: 10 TAGTSTIATDADLANDIIINNPADDSISDIAFSPQQDFLFSASSWDNK 57
>gi|302508751|ref|XP_003016336.1| hypothetical protein ARB_05735 [Arthroderma benhamiae CBS 112371]
gi|291179905|gb|EFE35691.1| hypothetical protein ARB_05735 [Arthroderma benhamiae CBS 112371]
Length = 356
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 1 MATFGAAAVATNQNP-NKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
MA A+ TNQ +K + ++ PP DS+S + +SP AN L SWD
Sbjct: 1 MAFNSASTGVTNQGDISKDVTLNNPPEDSISEVSWSPVANYLAVASWD 48
>gi|255727034|ref|XP_002548443.1| nucleoporin GLE2 [Candida tropicalis MYA-3404]
gi|240134367|gb|EER33922.1| nucleoporin GLE2 [Candida tropicalis MYA-3404]
Length = 374
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T Q I ++ PP DS+ L FSP+ ++L SWD +
Sbjct: 20 TGQELLNDITINNPPEDSIEDLSFSPQQDLLAVASWDKK 58
>gi|401412852|ref|XP_003885873.1| hypothetical protein NCLIV_062730 [Neospora caninum Liverpool]
gi|325120293|emb|CBZ55847.1| hypothetical protein NCLIV_062730 [Neospora caninum Liverpool]
Length = 331
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 18 SIEVSQPPSDSVSSLCFSPK--ANILVATSWD 47
SI++ P DS+SSLC++P +IL AT+WD
Sbjct: 2 SIDLRHEPRDSISSLCYAPNHGKSILAATAWD 33
>gi|241956910|ref|XP_002421175.1| poly(A) RNA export protein, putative; subunit of the nuclear pore
complex, putative [Candida dubliniensis CD36]
gi|223644518|emb|CAX41336.1| poly(A) RNA export protein, putative [Candida dubliniensis CD36]
Length = 388
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
T Q I ++ PP DS+ L FSP+ ++L SWD +
Sbjct: 21 TGQELLNDITINNPPEDSIEDLSFSPQQDLLAVASWDKK 59
>gi|85101044|ref|XP_961078.1| Poly(A)+ RNA export protein [Neurospora crassa OR74A]
gi|28922616|gb|EAA31842.1| Poly(A)+ RNA export protein [Neurospora crassa OR74A]
gi|336472111|gb|EGO60271.1| Poly(A)+ RNA export protein [Neurospora tetrasperma FGSC 2508]
gi|350294680|gb|EGZ75765.1| Poly(A)+ RNA export protein [Neurospora tetrasperma FGSC 2509]
Length = 357
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 4 FGAAAVA---TNQNPNKSIEVSQPPSDSVSSLCFSP----KANILVATSWDNQ 49
FG+AA + T + + +E+ QPP DS+S L F+P + + L SWD +
Sbjct: 5 FGSAAASASNTLGDLKQDVELGQPPEDSISDLAFNPNPADQKDFLAVASWDKK 57
>gi|11611450|emb|CAC18615.1| probable nuclear pore complex protein sonA [Neurospora crassa]
Length = 349
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 4 FGAAAVA---TNQNPNKSIEVSQPPSDSVSSLCFSP----KANILVATSWDNQ 49
FG+AA + T + + +E+ QPP DS+S L F+P + + L SWD +
Sbjct: 5 FGSAAASASNTLGDLKQDVELGQPPEDSISDLAFNPNPADQKDFLAVASWDKK 57
>gi|296423944|ref|XP_002841512.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637752|emb|CAZ85703.1| unnamed protein product [Tuber melanosporum]
Length = 361
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I +S PP DS+S L FS K+++L SWD +
Sbjct: 29 ITLSSPPEDSISDLEFSTKSDLLAVASWDKR 59
>gi|209882508|ref|XP_002142690.1| poly(A)+ RNA export protein [Cryptosporidium muris RN66]
gi|209558296|gb|EEA08341.1| poly(A)+ RNA export protein, putative [Cryptosporidium muris
RN66]
Length = 350
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 4 FGAAAVA--TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
FG++ + N N SIE+S P+DS++ +C+S ++++ A SWD
Sbjct: 2 FGSSTFGNQSKYNVNGSIELSDCPNDSINKVCWSMNSSLIAAASWD 47
>gi|328865474|gb|EGG13860.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
Length = 342
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 24 PPSDSVSSLCFSPKANILVATSWD 47
PPSD V+SL + P +N+L+A+SWD
Sbjct: 22 PPSDGVTSLNYCPSSNLLLASSWD 45
>gi|167521549|ref|XP_001745113.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776727|gb|EDQ90346.1| predicted protein [Monosiga brevicollis MX1]
Length = 325
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWD 47
+E++ PP D ++ + F+P +N L+A+SWD
Sbjct: 4 VELASPPQDGITRVAFAPASNDLLASSWD 32
>gi|378730830|gb|EHY57289.1| cell cycle arrest protein BUB3 [Exophiala dermatitidis
NIH/UT8656]
Length = 361
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K + ++ PP DS S L FSP A+ L SWD +
Sbjct: 23 KDVALTSPPEDSTSDLQFSPAADFLAVASWDKK 55
>gi|195585964|ref|XP_002082748.1| GD25070 [Drosophila simulans]
gi|194194757|gb|EDX08333.1| GD25070 [Drosophila simulans]
Length = 336
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
NQ + E+ +PP+DS+S+L F+P++ N + A SWDN
Sbjct: 7 VNQVQQQDYELPEPPNDSISALEFAPRSSSWNAICAGSWDN 47
>gi|238596375|ref|XP_002394031.1| hypothetical protein MPER_06144 [Moniliophthora perniciosa FA553]
gi|215462416|gb|EEB94961.1| hypothetical protein MPER_06144 [Moniliophthora perniciosa FA553]
Length = 272
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 1 MATFGAA-AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
M+ FG+A + T N K IE+S PP+DS+SS+ FS +A+ L SWDN
Sbjct: 11 MSFFGSATSTPTTSNAEKDIEMSDPPTDSISSMSFSSQADYLAVGSWDN 59
>gi|448117190|ref|XP_004203195.1| Piso0_000796 [Millerozyma farinosa CBS 7064]
gi|359384063|emb|CCE78767.1| Piso0_000796 [Millerozyma farinosa CBS 7064]
Length = 367
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I V+ PP DS++ L FSP ++L SWD +
Sbjct: 25 ITVNNPPEDSITGLSFSPHQDLLAVPSWDKK 55
>gi|195347008|ref|XP_002040046.1| GM15568 [Drosophila sechellia]
gi|194135395|gb|EDW56911.1| GM15568 [Drosophila sechellia]
Length = 336
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
NQ + E+ +PP+DS+S+L F+P++ N + A SWDN
Sbjct: 7 VNQIQQQDYELPEPPNDSISALEFAPRSSSWNAICAGSWDN 47
>gi|320584158|gb|EFW98369.1| nucleoporin GLE2 [Ogataea parapolymorpha DL-1]
Length = 371
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
+ T Q+ I V P DS+S L FSP A L +SWD +
Sbjct: 27 SAGTLQDLQNDIVVPNGPEDSISDLAFSPVAEFLAVSSWDRK 68
>gi|448119608|ref|XP_004203776.1| Piso0_000796 [Millerozyma farinosa CBS 7064]
gi|359384644|emb|CCE78179.1| Piso0_000796 [Millerozyma farinosa CBS 7064]
Length = 367
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I V+ PP DS++ L FSP ++L SWD +
Sbjct: 25 ITVNNPPEDSITGLSFSPHQDLLAVPSWDKK 55
>gi|226290705|gb|EEH46189.1| nucleoporin-17 [Paracoccidioides brasiliensis Pb18]
Length = 294
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 1 MATFGAAAVATN-----QNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA FG A +T + +K + ++ PP DS+S L FS ++ L SWD +
Sbjct: 1 MALFGTATTSTAVSNTAGDLSKDVALTSPPEDSISDLAFSSVSDHLAVASWDKK 54
>gi|321259131|ref|XP_003194286.1| poly(a)+ rna export protein [Cryptococcus gattii WM276]
gi|317460757|gb|ADV22499.1| Poly(a)+ rna export protein [Cryptococcus gattii WM276]
Length = 358
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
F AA + T + +V QPP D +SS+ FSP ++ L+ +SWD
Sbjct: 10 FQAAQLTTRPD-----QVLQPPVDGISSIAFSPDSSRLLVSSWDG 49
>gi|367049766|ref|XP_003655262.1| hypothetical protein THITE_2151251 [Thielavia terrestris NRRL
8126]
gi|347002526|gb|AEO68926.1| hypothetical protein THITE_2151251 [Thielavia terrestris NRRL
8126]
Length = 351
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 1 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
+A A AT +K +E+ + P DSVS+L +SP A+ L SWD +
Sbjct: 3 LARGKTATSATKGLLDKDVELPKGPQDSVSALRWSPVADHLAVASWDGR 51
>gi|298709335|emb|CBJ31271.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 366
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 25 PSDSVSSLCFSPKANILVATSWDN 48
PSD VS + FSP N++ A SWDN
Sbjct: 19 PSDGVSDITFSPTGNLITAGSWDN 42
>gi|297830624|ref|XP_002883194.1| hypothetical protein ARALYDRAFT_898343 [Arabidopsis lyrata subsp.
lyrata]
gi|297329034|gb|EFH59453.1| hypothetical protein ARALYDRAFT_898343 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
P+ E+S PPSD +S+L FS ++ L+ +SWD +
Sbjct: 5 PSAGRELSNPPSDGISNLRFSNNSDHLLVSSWDKR 39
>gi|189195662|ref|XP_001934169.1| Poly(A)+ RNA export protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980048|gb|EDU46674.1| Poly(A)+ RNA export protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 362
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 1 MATFGAAAV----ATNQNPNKSIEV--SQPPSDSVSSLCFSPKANILVATSWDNQ 49
M FG AA +T + +K +EV Q PSDSVS L FSP + L SWD +
Sbjct: 1 MTLFGQAAAPAASSTTGDTSKDVEVPQGQVPSDSVSDLQFSPTNDFLAVGSWDKK 55
>gi|225678256|gb|EEH16540.1| Poly(A)+ RNA export protein [Paracoccidioides brasiliensis Pb03]
Length = 361
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 1 MATFGAAAVATN-----QNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA FG A +T + +K + ++ PP DS+S L FS ++ L SWD +
Sbjct: 1 MALFGTATTSTAVSNTAGDLSKDVALTSPPEDSISDLAFSSVSDHLAVASWDKK 54
>gi|358387300|gb|EHK24895.1| hypothetical protein TRIVIDRAFT_72120 [Trichoderma virens Gv29-8]
Length = 348
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPKANI-LVATSWDNQ 49
P E+S PP D+VSS+ F+P + L+ +SWDN+
Sbjct: 3 PATQYELSPPPGDAVSSIAFAPDSGTKLLVSSWDNK 38
>gi|67521844|ref|XP_658983.1| hypothetical protein AN1379.2 [Aspergillus nidulans FGSC A4]
gi|3202044|gb|AAC27297.1| SONA [Emericella nidulans]
gi|40746053|gb|EAA65209.1| hypothetical protein AN1379.2 [Aspergillus nidulans FGSC A4]
gi|259488284|tpe|CBF87612.1| TPA: Putative uncharacterized proteinSONA ;
[Source:UniProtKB/TrEMBL;Acc:O74224] [Aspergillus
nidulans FGSC A4]
Length = 362
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 4 FGA------AAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
FGA AA T + +K + ++ PP DS+S L FSP + L SWD +
Sbjct: 5 FGATANTSTAASNTTGDISKDVALNSPPEDSISDLRFSPASEHLAVASWDKK 56
>gi|300707131|ref|XP_002995787.1| hypothetical protein NCER_101237 [Nosema ceranae BRL01]
gi|239605001|gb|EEQ82116.1| hypothetical protein NCER_101237 [Nosema ceranae BRL01]
Length = 317
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWD 47
K E+ PP+D+VS FS N+++A+SWD
Sbjct: 7 KIFEIQSPPTDTVSEFSFSTLHNMMIASSWD 37
>gi|116195814|ref|XP_001223719.1| hypothetical protein CHGG_04505 [Chaetomium globosum CBS 148.51]
gi|88180418|gb|EAQ87886.1| hypothetical protein CHGG_04505 [Chaetomium globosum CBS 148.51]
Length = 354
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPK-ANILVATSWDN 48
P E +QPP D++S+L F+P + L+A+SWD
Sbjct: 3 PAAQFEAAQPPKDAISALVFAPGPSRRLLASSWDK 37
>gi|336269107|ref|XP_003349315.1| hypothetical protein SMAC_05598 [Sordaria macrospora k-hell]
gi|380089888|emb|CCC12421.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 357
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 4 FGAAAVA---TNQNPNKSIEVSQPPSDSVSSLCFSP----KANILVATSWDNQ 49
FG+AA + T + + +E+ QPP DS++ L F+P + + L SWD +
Sbjct: 5 FGSAAASASNTLGDLKQDVELGQPPEDSITDLAFNPNPADQKDFLAVASWDKK 57
>gi|440636160|gb|ELR06079.1| hypothetical protein GMDG_07790 [Geomyces destructans 20631-21]
Length = 356
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 6 AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
A A T + +K I+++ P DS+S + FSP+++ L SWD +
Sbjct: 10 ATAANTLGDLSKDIQLNNGPEDSISHISFSPQSDHLAVASWDKK 53
>gi|358388019|gb|EHK25613.1| hypothetical protein TRIVIDRAFT_85369 [Trichoderma virens Gv29-8]
Length = 357
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKAN---ILVATSWDNQ 49
+ + ++ PP+DS+S L FSP AN L +SWDN+
Sbjct: 22 QDVALNDPPTDSISDLVFSPAANGPDFLAISSWDNK 57
>gi|330789614|ref|XP_003282894.1| hypothetical protein DICPUDRAFT_73923 [Dictyostelium purpureum]
gi|325087178|gb|EGC40558.1| hypothetical protein DICPUDRAFT_73923 [Dictyostelium purpureum]
Length = 384
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 10 ATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSW 46
+TN++PN+SI S P S +SS SP+ +IL + W
Sbjct: 345 STNESPNQSISYSPPISYPISSAYLSPQMSILCSPGW 381
>gi|406863534|gb|EKD16581.1| Poly(A)+ RNA export protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 360
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
+ +S PP DS+S L FSP+++ L SWD +
Sbjct: 26 VALSNPPDDSISDLSFSPQSSHLAVASWDKK 56
>gi|443896854|dbj|GAC74197.1| mRNA export protein [Pseudozyma antarctica T-34]
Length = 395
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 10/56 (17%)
Query: 3 TFGAAAVATNQNPNKSI----------EVSQPPSDSVSSLCFSPKANILVATSWDN 48
TFGA AT N S EV+ +D+VS+L FSP A+ L SWDN
Sbjct: 12 TFGARPAATPGQINTSAASKTTGDQDQEVTPGATDTVSALAFSPTADFLAVASWDN 67
>gi|323454997|gb|EGB10866.1| hypothetical protein AURANDRAFT_58787 [Aureococcus
anophagefferens]
Length = 358
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 4 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSW 46
FG A+ + NPN V PSD VSSL FS + LVA+SW
Sbjct: 2 FGQPALNAS-NPNNDTVVPNSPSDGVSSLTFSASSQFLVASSW 43
>gi|154300942|ref|XP_001550885.1| hypothetical protein BC1G_10609 [Botryotinia fuckeliana B05.10]
gi|347831171|emb|CCD46868.1| similar to poly(A)+ RNA export protein [Botryotinia fuckeliana]
Length = 360
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K I ++ PP DS+S L FSP + L SWD +
Sbjct: 25 KDIPLNNPPEDSISDLAFSPVSEHLAVASWDKK 57
>gi|405120789|gb|AFR95559.1| spindle assembly checkpoint protein SLDB [Cryptococcus neoformans
var. grubii H99]
Length = 341
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
S +V QPP D +SS+ FSP ++ L+ +SWD
Sbjct: 3 SDQVLQPPVDGISSVAFSPDSSRLLVSSWDG 33
>gi|119184833|ref|XP_001243277.1| hypothetical protein CIMG_07173 [Coccidioides immitis RS]
gi|392866165|gb|EAS28775.2| Poly(A)+ RNA export protein [Coccidioides immitis RS]
Length = 359
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 ATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
A FG+ +T + +K + +S PP DS+S L FS ++ L SWD +
Sbjct: 4 ALFGST-TSTTGDLSKDVALSSPPEDSISDLAFSSVSDHLAVASWDKK 50
>gi|303320627|ref|XP_003070313.1| poly(A)+ RNA export protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109999|gb|EER28168.1| poly(A)+ RNA export protein, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320041416|gb|EFW23349.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 359
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 ATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
A FG+ +T + +K + +S PP DS+S L FS ++ L SWD +
Sbjct: 4 ALFGST-TSTTGDLSKDVALSSPPEDSISDLAFSSVSDHLAVASWDKK 50
>gi|290984422|ref|XP_002674926.1| hypothetical protein NAEGRDRAFT_83226 [Naegleria gruberi]
gi|284088519|gb|EFC42182.1| hypothetical protein NAEGRDRAFT_83226 [Naegleria gruberi]
Length = 367
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 14 NPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
NPN S + PSD+VS + + P N +VA+SWD
Sbjct: 29 NPNGSYCLPDLPSDTVSMISWCPTQNFIVASSWDG 63
>gi|156043099|ref|XP_001588106.1| hypothetical protein SS1G_10552 [Sclerotinia sclerotiorum 1980]
gi|154694940|gb|EDN94678.1| hypothetical protein SS1G_10552 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 360
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K I ++ PP DS+S L FSP + L SWD +
Sbjct: 25 KDIPLNNPPEDSISDLSFSPVSEHLAVASWDKK 57
>gi|258568592|ref|XP_002585040.1| Poly(A)+ RNA export protein [Uncinocarpus reesii 1704]
gi|237906486|gb|EEP80887.1| Poly(A)+ RNA export protein [Uncinocarpus reesii 1704]
Length = 360
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 4 FGAAAVA-TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
FG+A+ A ++ + +K + +S PP DS+S L FS ++ L SWD +
Sbjct: 5 FGSASPAGSSGDISKDVALSSPPDDSISDLAFSSASDHLAVASWDKK 51
>gi|156049605|ref|XP_001590769.1| hypothetical protein SS1G_08509 [Sclerotinia sclerotiorum 1980]
gi|154692908|gb|EDN92646.1| hypothetical protein SS1G_08509 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 261
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSP-KANILVATSWDNQ 49
P E+S+PP+D+VSSL FSP L+ +SWD +
Sbjct: 3 PAVQFELSEPPTDAVSSLQFSPYTPTKLLVSSWDKK 38
>gi|70994986|ref|XP_752269.1| nuclear pore complex protein (SonA) [Aspergillus fumigatus Af293]
gi|66849904|gb|EAL90231.1| nuclear pore complex protein (SonA), putative [Aspergillus
fumigatus Af293]
gi|159131025|gb|EDP56138.1| nuclear pore complex protein (SonA), putative [Aspergillus
fumigatus A1163]
Length = 363
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 1 MATFG--------AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG A T + +K + +S PP D +S L FSP + L SWD +
Sbjct: 1 MSLFGNVGATSTTAGQTNTTGDISKDVPLSSPPEDGISDLRFSPASEHLAVASWDKK 57
>gi|169768116|ref|XP_001818529.1| poly(A)+ RNA export protein [Aspergillus oryzae RIB40]
gi|238485067|ref|XP_002373772.1| nuclear pore complex protein (SonA), putative [Aspergillus flavus
NRRL3357]
gi|83766384|dbj|BAE56527.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701822|gb|EED58160.1| nuclear pore complex protein (SonA), putative [Aspergillus flavus
NRRL3357]
gi|391869901|gb|EIT79091.1| mRNA export protein [Aspergillus oryzae 3.042]
Length = 363
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 1 MATFG--------AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG A T + +K + ++ PP DS+S L FSP + L SWD +
Sbjct: 1 MSLFGSVGTTSTTAGQTNTTGDISKDVALNSPPEDSISDLQFSPASEHLAVASWDKK 57
>gi|254417311|ref|ZP_05031054.1| hypothetical protein MC7420_8080 [Coleofasciculus chthonoplastes PCC
7420]
gi|196175849|gb|EDX70870.1| hypothetical protein MC7420_8080 [Coleofasciculus chthonoplastes PCC
7420]
Length = 1620
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 26 SDSVSSLCFSPKANILVATSWDNQ 49
+DSV+ + FSP+ NIL TSWDN+
Sbjct: 1512 TDSVARVEFSPRGNILATTSWDNR 1535
>gi|119496179|ref|XP_001264863.1| nuclear pore complex protein (SonA), putative [Neosartorya
fischeri NRRL 181]
gi|119413025|gb|EAW22966.1| nuclear pore complex protein (SonA), putative [Neosartorya
fischeri NRRL 181]
Length = 363
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 1 MATFG--------AAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
M+ FG A T + +K + +S PP D +S L FSP + L SWD +
Sbjct: 1 MSLFGNVGATSTTAGQTNTTGDISKDVPLSSPPEDGISDLRFSPASEHLAVASWDKK 57
>gi|389748199|gb|EIM89377.1| WD40 repeat-like protein [Stereum hirsutum FP-91666 SS1]
Length = 334
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKA-NILVATSWD 47
+ IE+S PP D +SS+ FSPK N L+ SWD
Sbjct: 3 EQIELSSPPFDGISSVRFSPKDPNQLLVASWD 34
>gi|238882949|gb|EEQ46587.1| nucleoporin GLE2 [Candida albicans WO-1]
Length = 383
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I ++ PP DS+ + FSP+ ++L SWD +
Sbjct: 29 ITINNPPEDSIEDISFSPQQDLLAVASWDKK 59
>gi|68488097|ref|XP_712107.1| likely WD40 repeat nuclear pore protein Gle2p [Candida albicans
SC5314]
gi|68488150|ref|XP_712083.1| likely WD40 repeat nuclear pore protein Gle2p [Candida albicans
SC5314]
gi|46433447|gb|EAK92887.1| likely WD40 repeat nuclear pore protein Gle2p [Candida albicans
SC5314]
gi|46433473|gb|EAK92912.1| likely WD40 repeat nuclear pore protein Gle2p [Candida albicans
SC5314]
Length = 383
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I ++ PP DS+ + FSP+ ++L SWD +
Sbjct: 29 ITINNPPEDSIEDISFSPQQDLLAVASWDKK 59
>gi|195380587|ref|XP_002049052.1| GJ20971 [Drosophila virilis]
gi|194143849|gb|EDW60245.1| GJ20971 [Drosophila virilis]
Length = 333
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 19 IEVSQPPSDSVSSLCFSPK-ANILVATSWD 47
EV PPSDS+S+L FSP N+L A SWD
Sbjct: 8 FEVCFPPSDSISALEFSPAPRNMLCAGSWD 37
>gi|340513776|gb|EGR44062.1| predicted protein [Trichoderma reesei QM6a]
Length = 358
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 16 NKSIEVSQPPSDSVSSLCFSPKAN---ILVATSWDNQ 49
+ + +S PP+DS+S L FSP N L +SWDN+
Sbjct: 22 KQDVALSDPPTDSISDLAFSPAPNTPDFLAISSWDNK 58
>gi|330906302|ref|XP_003295424.1| hypothetical protein PTT_00913 [Pyrenophora teres f. teres 0-1]
gi|311333296|gb|EFQ96477.1| hypothetical protein PTT_00913 [Pyrenophora teres f. teres 0-1]
Length = 363
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 1 MATFG-----AAAVATNQNPNKSIEV--SQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA FG ++ +T + +K +EV Q PSDSVS L FSP + L SWD +
Sbjct: 1 MALFGQAAAASSTSSTTGDTSKDVEVPQGQVPSDSVSDLQFSPTNDFLAVGSWDKK 56
>gi|328772907|gb|EGF82944.1| hypothetical protein BATDEDRAFT_84472 [Batrachochytrium
dendrobatidis JAM81]
Length = 336
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 12 NQNPNKSIEVSQPPSDSVSSLCFSP-KANILVATSWDN 48
Q P +E+S PP D +SS+ FS N+L +SWD
Sbjct: 3 GQQPLLGLELSNPPQDGISSMEFSKTDKNLLAVSSWDK 40
>gi|346976463|gb|EGY19915.1| mitotic checkpoint protein BUB3 [Verticillium dahliae VdLs.17]
Length = 356
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPK-ANILVATSWDN 48
P E++QPP+D+VSSL ++P+ + L+ +SWD
Sbjct: 3 PATQFELAQPPNDAVSSLSYAPQNSTRLLVSSWDK 37
>gi|453081187|gb|EMF09236.1| mitotic checkpoint protein BUB3 [Mycosphaerella populorum SO2202]
Length = 370
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
E+ QPP D +SSL FS ++ LV ++WD +
Sbjct: 5 ELPQPPPDVISSLAFSKDSDTLVVSAWDRE 34
>gi|302419205|ref|XP_003007433.1| mitotic checkpoint protein BUB3 [Verticillium albo-atrum
VaMs.102]
gi|261353084|gb|EEY15512.1| mitotic checkpoint protein BUB3 [Verticillium albo-atrum
VaMs.102]
Length = 353
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPK-ANILVATSWDN 48
P E++QPP+D+VSSL ++P+ + L+ +SWD
Sbjct: 3 PATQFELAQPPNDAVSSLSYAPQNSTRLLVSSWDK 37
>gi|224060765|ref|XP_002300265.1| predicted protein [Populus trichocarpa]
gi|222847523|gb|EEE85070.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 22/28 (78%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWD 47
E+S PP+D +S+L FS +++L+ +SWD
Sbjct: 4 ELSNPPTDGISNLRFSNHSDLLLVSSWD 31
>gi|297847322|ref|XP_002891542.1| hypothetical protein ARALYDRAFT_474121 [Arabidopsis lyrata subsp.
lyrata]
gi|297337384|gb|EFH67801.1| hypothetical protein ARALYDRAFT_474121 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWD 47
E+S PPSD +S+L FS ++ L+ +SWD
Sbjct: 10 ELSNPPSDGISNLRFSNSSDHLIVSSWD 37
>gi|354545588|emb|CCE42316.1| hypothetical protein CPAR2_808650 [Candida parapsilosis]
Length = 371
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I V+ PP DS+ + FSP+ ++L SWD +
Sbjct: 26 ILVNNPPEDSIEDISFSPQQDLLAVASWDKK 56
>gi|196009155|ref|XP_002114443.1| hypothetical protein TRIADDRAFT_27419 [Trichoplax adhaerens]
gi|190583462|gb|EDV23533.1| hypothetical protein TRIADDRAFT_27419 [Trichoplax adhaerens]
Length = 350
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 11 TNQNPNKSIEVSQPPSDSVSSLCFSPKAN---ILVATSWDN 48
T+ NPNK +EV PPSDSVSSL FSP +N LVATSWDN
Sbjct: 18 TSNNPNKDVEVVSPPSDSVSSLAFSPPSNNAIFLVATSWDN 58
>gi|448520664|ref|XP_003868333.1| nuclear pore complex [Candida orthopsilosis Co 90-125]
gi|380352673|emb|CCG25429.1| nuclear pore complex [Candida orthopsilosis]
Length = 371
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
I V+ PP DS+ + FSP+ ++L SWD +
Sbjct: 26 ILVNNPPEDSIEDISFSPQQDLLAVASWDKK 56
>gi|222637370|gb|EEE67502.1| hypothetical protein OsJ_24938 [Oryza sativa Japonica Group]
Length = 323
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWD 47
E+ +PPSD VSSL FS ++ L+ +SWD
Sbjct: 6 ELREPPSDGVSSLRFSKHSDRLLVSSWD 33
>gi|71019357|ref|XP_759909.1| hypothetical protein UM03762.1 [Ustilago maydis 521]
gi|46099564|gb|EAK84797.1| hypothetical protein UM03762.1 [Ustilago maydis 521]
Length = 395
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 10 ATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48
AT + ++ EV+ +D+VS L FSP A+ L SWDN
Sbjct: 29 ATKTSGDQDQEVAPGATDTVSCLAFSPTADFLAVGSWDN 67
>gi|343424835|emb|CBQ68373.1| related to GLE2-required for nuclear pore complex structure and
function [Sporisorium reilianum SRZ2]
Length = 395
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
Query: 3 TFGAAAVATNQNPNKSI----------EVSQPPSDSVSSLCFSPKANILVATSWDN 48
TFGA AT N S EV+ +D+VS L FSP A+ L SWDN
Sbjct: 12 TFGARPAATPGQINTSAASKTSGDQDQEVTPGATDTVSCLAFSPTADFLAVGSWDN 67
>gi|12323596|gb|AAG51772.1|AC079674_5 mitotic checkpoint protein, 3' partial; 47356-48732 [Arabidopsis
thaliana]
Length = 250
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 20 EVSQPPSDSVSSLCFSPKANILVATSWD 47
E+S PPSD +S+L FS ++ L+ +SWD
Sbjct: 10 ELSNPPSDGISNLRFSNNSDHLLVSSWD 37
>gi|195489063|ref|XP_002092578.1| GE11590 [Drosophila yakuba]
gi|194178679|gb|EDW92290.1| GE11590 [Drosophila yakuba]
Length = 337
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 13 QNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDN 48
QN + E+ +PP+DS+S+L F P + N + A SWDN
Sbjct: 9 QNQQQDYELPEPPNDSISALEFVPPSSCWNAICAGSWDN 47
>gi|451855117|gb|EMD68409.1| hypothetical protein COCSADRAFT_108882 [Cochliobolus sativus
ND90Pr]
gi|452004148|gb|EMD96604.1| hypothetical protein COCHEDRAFT_1123063 [Cochliobolus
heterostrophus C5]
Length = 363
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 1 MATFG-----AAAVATNQNPNKSIEV--SQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA FG AA +T + +K +EV Q PSDS+S L FSP + L SWD +
Sbjct: 1 MALFGQAAAPAATSSTTGDTSKDVEVPAGQVPSDSISDLQFSPTNDFLAVGSWDKK 56
>gi|406867013|gb|EKD20052.1| mitotic checkpoint protein BUB3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 262
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 15 PNKSIEVSQPPSDSVSSLCFSPKANI-LVATSWDNQ 49
P ++S PPSD++SSL F+P A L+ +SWD +
Sbjct: 3 PQLQYKLSSPPSDAISSLKFAPSAPTRLLVSSWDKK 38
>gi|295674509|ref|XP_002797800.1| Poly(A)+ RNA export protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280450|gb|EEH36016.1| Poly(A)+ RNA export protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 361
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 1 MATFGAA----AVA-TNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
MA FG A AV+ T + +K + ++ PP DS+S L FS ++ L SWD +
Sbjct: 1 MALFGTATSTTAVSNTAGDLSKDVALNSPPEDSISDLAFSSVSDHLAVASWDKK 54
>gi|363755200|ref|XP_003647815.1| hypothetical protein Ecym_7149 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891851|gb|AET40998.1| hypothetical protein Ecym_7149 [Eremothecium cymbalariae
DBVPG#7215]
Length = 365
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 8 AVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVAT-SWDN 48
A+AT+++ I ++ P +DS+S + FSP+ + L + SWDN
Sbjct: 15 AMATDKDLVNDITINNPANDSISDIAFSPQQDFLFSVASWDN 56
>gi|322710291|gb|EFZ01866.1| Poly(A)+ RNA export protein [Metarhizium anisopliae ARSEF 23]
Length = 358
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 19 IEVSQPPSDSVSSLCFSPKAN---ILVATSWDNQ 49
+ +S PP+DS+S+L FSP N L SWDN+
Sbjct: 24 VALSDPPTDSISALSFSPAPNGPDFLAVASWDNK 57
>gi|115402063|ref|XP_001217108.1| Poly(A)+ RNA export protein [Aspergillus terreus NIH2624]
gi|114188954|gb|EAU30654.1| Poly(A)+ RNA export protein [Aspergillus terreus NIH2624]
Length = 363
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49
K + ++ PP DS+S L FSP + L SWD +
Sbjct: 25 KDVALNSPPEDSISDLRFSPASEHLAVASWDKK 57
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.307 0.117 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 697,784,561
Number of Sequences: 23463169
Number of extensions: 14582195
Number of successful extensions: 47513
Number of sequences better than 100.0: 396
Number of HSP's better than 100.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 47160
Number of HSP's gapped (non-prelim): 442
length of query: 49
length of database: 8,064,228,071
effective HSP length: 22
effective length of query: 27
effective length of database: 7,548,038,353
effective search space: 203797035531
effective search space used: 203797035531
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)