Query 045898
Match_columns 49
No_of_seqs 101 out of 398
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 11:19:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045898.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045898hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 98.0 4.2E-06 1.5E-10 52.7 4.0 30 20-49 306-335 (365)
2 4ggc_A P55CDC, cell division c 97.8 2.7E-05 9.3E-10 45.9 4.4 33 17-49 275-307 (318)
3 1yfq_A Cell cycle arrest prote 97.7 2.8E-05 9.7E-10 46.4 3.5 32 17-48 2-33 (342)
4 2pm7_B Protein transport prote 97.7 5E-05 1.7E-09 46.0 4.4 30 20-49 3-32 (297)
5 4aow_A Guanine nucleotide-bind 97.6 0.00011 3.7E-09 43.7 4.8 28 22-49 34-62 (340)
6 2pbi_B Guanine nucleotide-bind 97.5 0.00012 4E-09 45.6 4.4 32 18-49 318-349 (354)
7 3iz6_a 40S ribosomal protein R 97.5 8.4E-05 2.9E-09 46.5 3.4 27 23-49 341-367 (380)
8 4gga_A P55CDC, cell division c 97.4 0.00017 6E-09 45.4 4.4 33 17-49 355-387 (420)
9 3bg1_A Protein SEC13 homolog; 97.4 7.9E-05 2.7E-09 45.6 2.6 29 21-49 8-36 (316)
10 2ynn_A Coatomer subunit beta'; 97.4 0.00011 3.6E-09 44.7 3.0 29 21-49 8-36 (304)
11 3fm0_A Protein CIAO1; WDR39,SG 97.4 0.00026 8.8E-09 43.7 4.8 29 21-49 56-84 (345)
12 2ymu_A WD-40 repeat protein; u 97.4 0.00023 7.9E-09 45.6 4.4 27 22-48 12-38 (577)
13 3mmy_A MRNA export factor; mRN 97.4 0.00034 1.2E-08 41.6 4.7 35 14-48 27-64 (368)
14 1got_B GT-beta; complex (GTP-b 97.3 0.0003 1E-08 43.3 4.5 32 18-49 304-335 (340)
15 3iz6_a 40S ribosomal protein R 97.3 0.00024 8.4E-09 44.4 4.1 32 18-49 58-89 (380)
16 4gga_A P55CDC, cell division c 97.3 0.00025 8.7E-09 44.6 4.2 27 23-49 144-170 (420)
17 3vu4_A KMHSV2; beta-propeller 97.3 0.00033 1.1E-08 43.6 4.4 31 19-49 188-218 (355)
18 3f3f_A Nucleoporin SEH1; struc 97.3 0.00028 9.4E-09 41.2 3.7 29 20-48 5-33 (351)
19 4g56_B MGC81050 protein; prote 97.3 0.00016 5.4E-09 45.2 2.8 22 24-45 40-61 (357)
20 2hes_X YDR267CP; beta-propelle 97.2 0.00047 1.6E-08 42.3 4.4 31 19-49 100-130 (330)
21 4ggc_A P55CDC, cell division c 97.2 0.0004 1.4E-08 40.9 3.7 27 23-49 64-90 (318)
22 1nr0_A Actin interacting prote 97.2 0.0004 1.4E-08 46.2 4.0 32 18-49 51-82 (611)
23 3f3f_A Nucleoporin SEH1; struc 97.2 0.0007 2.4E-08 39.5 4.7 33 17-49 297-329 (351)
24 2ynn_A Coatomer subunit beta'; 97.2 0.00079 2.7E-08 40.8 5.0 32 18-49 89-120 (304)
25 4g56_B MGC81050 protein; prote 97.1 0.00052 1.8E-08 42.8 4.1 27 23-49 308-335 (357)
26 3jrp_A Fusion protein of prote 97.1 0.00038 1.3E-08 41.7 3.3 31 19-49 4-34 (379)
27 4h5i_A Guanine nucleotide-exch 97.1 0.00067 2.3E-08 42.6 4.6 27 23-49 266-292 (365)
28 4gqb_B Methylosome protein 50; 97.1 0.00054 1.8E-08 43.1 4.1 27 23-49 124-150 (344)
29 2hes_X YDR267CP; beta-propelle 97.1 0.00084 2.9E-08 41.2 4.8 31 19-49 146-176 (330)
30 2ymu_A WD-40 repeat protein; u 97.1 0.00079 2.7E-08 43.1 4.8 33 17-49 540-572 (577)
31 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.00085 2.9E-08 41.4 4.8 31 19-49 98-128 (345)
32 4aow_A Guanine nucleotide-bind 97.1 0.0007 2.4E-08 40.2 4.2 27 23-49 303-329 (340)
33 1got_B GT-beta; complex (GTP-b 97.1 0.00089 3.1E-08 41.1 4.8 33 17-49 46-78 (340)
34 2pbi_B Guanine nucleotide-bind 97.1 0.0007 2.4E-08 42.1 4.1 33 17-49 55-87 (354)
35 4a11_B DNA excision repair pro 97.1 0.0012 4E-08 39.9 5.0 34 16-49 33-67 (408)
36 3frx_A Guanine nucleotide-bind 97.0 0.00087 3E-08 40.9 3.9 29 21-49 60-88 (319)
37 4gqb_B Methylosome protein 50; 96.9 0.0016 5.4E-08 40.9 5.1 29 21-49 294-323 (344)
38 1vyh_C Platelet-activating fac 96.9 0.0016 5.5E-08 41.2 4.9 31 19-49 143-173 (410)
39 1nr0_A Actin interacting prote 96.9 0.0015 5E-08 43.5 4.8 30 20-49 184-213 (611)
40 2w18_A PALB2, fancn, partner a 96.9 0.00088 3E-08 44.8 3.8 33 17-49 316-349 (356)
41 3dw8_B Serine/threonine-protei 96.9 0.00058 2E-08 42.2 2.7 25 24-48 26-50 (447)
42 4ery_A WD repeat-containing pr 96.9 0.0013 4.5E-08 39.3 4.2 28 22-49 19-46 (312)
43 2xzm_R RACK1; ribosome, transl 96.9 0.0014 4.9E-08 40.1 4.4 30 20-49 70-99 (343)
44 3zwl_B Eukaryotic translation 96.8 0.0018 6.2E-08 38.4 4.5 31 19-49 308-338 (369)
45 4a11_B DNA excision repair pro 96.8 0.0023 7.9E-08 38.6 5.0 33 17-49 325-357 (408)
46 4e54_B DNA damage-binding prot 96.8 0.0011 3.8E-08 41.9 3.6 27 23-49 161-188 (435)
47 3gre_A Serine/threonine-protei 96.8 0.0015 5E-08 40.7 3.9 30 20-49 57-87 (437)
48 3dwl_C Actin-related protein 2 96.8 0.0016 5.5E-08 39.5 3.9 31 19-49 48-78 (377)
49 3vl1_A 26S proteasome regulato 96.8 0.0023 8E-08 39.2 4.6 33 17-49 130-162 (420)
50 4ery_A WD repeat-containing pr 96.7 0.0024 8.3E-08 38.1 4.5 32 17-48 56-87 (312)
51 3zwl_B Eukaryotic translation 96.7 0.003 1E-07 37.4 4.6 28 22-49 28-55 (369)
52 4e54_B DNA damage-binding prot 96.7 0.0016 5.3E-08 41.3 3.5 28 22-49 115-143 (435)
53 1vyh_C Platelet-activating fac 96.7 0.0019 6.5E-08 40.9 3.9 31 19-49 373-403 (410)
54 2oaj_A Protein SNI1; WD40 repe 96.6 0.0018 6E-08 45.9 3.9 26 24-49 486-511 (902)
55 3vu4_A KMHSV2; beta-propeller 96.6 0.003 1E-07 39.3 4.4 25 25-49 239-263 (355)
56 3ow8_A WD repeat-containing pr 96.6 0.0042 1.4E-07 38.2 5.0 31 19-49 241-271 (321)
57 2pm7_B Protein transport prote 96.6 0.0032 1.1E-07 37.9 4.4 29 21-49 199-230 (297)
58 2xzm_R RACK1; ribosome, transl 96.6 0.004 1.4E-07 38.1 4.8 32 18-49 110-141 (343)
59 3ei3_B DNA damage-binding prot 96.6 0.0046 1.6E-07 37.8 5.0 33 17-49 64-97 (383)
60 3bg1_A Protein SEC13 homolog; 96.5 0.0021 7.2E-08 39.2 3.3 27 23-49 259-285 (316)
61 4gq1_A NUP37; propeller, trans 96.5 0.0022 7.4E-08 40.4 3.4 27 22-48 355-381 (393)
62 3i2n_A WD repeat-containing pr 96.5 0.0029 9.8E-08 37.6 3.6 30 19-48 314-344 (357)
63 2oaj_A Protein SNI1; WD40 repe 96.5 0.003 1E-07 44.7 4.2 30 19-49 568-597 (902)
64 3ow8_A WD repeat-containing pr 96.5 0.0063 2.2E-07 37.4 5.2 31 19-49 283-313 (321)
65 3frx_A Guanine nucleotide-bind 96.4 0.0056 1.9E-07 37.3 4.8 32 18-49 99-130 (319)
66 4gq1_A NUP37; propeller, trans 96.4 0.0011 3.9E-08 41.7 1.8 28 22-49 132-167 (393)
67 3dwl_C Actin-related protein 2 96.4 0.0054 1.8E-07 37.2 4.6 30 20-49 140-169 (377)
68 3dm0_A Maltose-binding peripla 96.4 0.0033 1.1E-07 42.1 3.9 29 21-49 425-453 (694)
69 3k26_A Polycomb protein EED; W 96.4 0.0085 2.9E-07 35.5 5.1 33 17-49 106-139 (366)
70 1erj_A Transcriptional repress 96.3 0.0062 2.1E-07 38.1 4.7 33 17-49 156-188 (393)
71 2aq5_A Coronin-1A; WD40 repeat 96.3 0.004 1.4E-07 38.6 3.6 29 21-49 76-105 (402)
72 3vl1_A 26S proteasome regulato 96.3 0.0056 1.9E-07 37.5 4.1 30 20-49 175-204 (420)
73 1k8k_C P40, ARP2/3 complex 41 96.2 0.0069 2.4E-07 36.2 4.4 32 18-49 44-75 (372)
74 1k8k_C P40, ARP2/3 complex 41 96.2 0.0028 9.7E-08 37.9 2.6 28 21-48 3-30 (372)
75 3mmy_A MRNA export factor; mRN 96.2 0.0082 2.8E-07 35.5 4.6 32 17-48 306-337 (368)
76 3k26_A Polycomb protein EED; W 96.2 0.0083 2.8E-07 35.6 4.5 24 26-49 335-358 (366)
77 2j04_B YDR362CP, TAU91; beta p 96.2 0.0027 9.2E-08 42.7 2.4 26 24-49 395-420 (524)
78 4aez_A CDC20, WD repeat-contai 96.1 0.01 3.5E-07 36.9 4.8 27 23-49 131-157 (401)
79 3jrp_A Fusion protein of prote 96.1 0.01 3.5E-07 35.4 4.6 31 19-49 48-80 (379)
80 2j04_A TAU60, YPL007P, hypothe 96.1 0.0059 2E-07 43.1 3.9 26 24-49 83-108 (588)
81 3odt_A Protein DOA1; ubiquitin 96.0 0.0092 3.1E-07 34.7 4.0 31 17-48 9-39 (313)
82 2j04_A TAU60, YPL007P, hypothe 96.0 0.0051 1.7E-07 43.4 3.3 23 27-49 130-152 (588)
83 3dm0_A Maltose-binding peripla 96.0 0.011 3.9E-07 39.5 4.8 32 18-49 553-584 (694)
84 3odt_A Protein DOA1; ubiquitin 96.0 0.011 3.9E-07 34.3 4.3 32 18-49 51-82 (313)
85 2oit_A Nucleoporin 214KDA; NH2 96.0 0.0075 2.6E-07 39.2 3.8 31 19-49 142-173 (434)
86 1r5m_A SIR4-interacting protei 96.0 0.017 5.8E-07 34.8 5.1 32 18-49 384-417 (425)
87 1erj_A Transcriptional repress 95.9 0.0077 2.6E-07 37.7 3.7 27 23-49 253-279 (393)
88 2pm9_A Protein WEB1, protein t 95.8 0.013 4.6E-07 35.6 4.3 32 18-49 105-137 (416)
89 3i2n_A WD repeat-containing pr 95.8 0.0063 2.2E-07 36.1 2.7 27 20-46 12-39 (357)
90 1r5m_A SIR4-interacting protei 95.8 0.023 8E-07 34.2 5.1 33 17-49 140-172 (425)
91 1pgu_A Actin interacting prote 95.7 0.011 3.9E-07 37.6 3.9 32 17-49 575-606 (615)
92 1sq9_A Antiviral protein SKI8; 95.7 0.013 4.5E-07 35.5 4.0 24 25-48 290-313 (397)
93 3jro_A Fusion protein of prote 95.7 0.0052 1.8E-07 42.1 2.4 30 20-49 3-32 (753)
94 3dw8_B Serine/threonine-protei 95.7 0.014 4.7E-07 36.0 4.1 27 23-49 223-250 (447)
95 2aq5_A Coronin-1A; WD40 repeat 95.7 0.018 6E-07 35.7 4.5 26 23-48 173-198 (402)
96 1gxr_A ESG1, transducin-like e 95.6 0.022 7.6E-07 33.3 4.7 32 17-48 174-205 (337)
97 3gre_A Serine/threonine-protei 95.6 0.016 5.6E-07 35.9 4.3 25 25-49 213-237 (437)
98 1gxr_A ESG1, transducin-like e 95.6 0.026 8.8E-07 33.0 4.9 27 22-48 261-287 (337)
99 1pgu_A Actin interacting prote 95.6 0.023 7.7E-07 36.2 4.9 32 17-48 54-88 (615)
100 3sfz_A APAF-1, apoptotic pepti 95.6 0.015 5.2E-07 40.8 4.3 28 22-49 611-638 (1249)
101 2oit_A Nucleoporin 214KDA; NH2 95.6 0.0089 3.1E-07 38.8 3.0 26 24-49 190-215 (434)
102 3lrv_A PRE-mRNA-splicing facto 95.5 0.019 6.4E-07 35.0 4.2 26 24-49 168-193 (343)
103 3v7d_B Cell division control p 95.5 0.025 8.4E-07 35.4 4.7 33 17-49 301-333 (464)
104 3ei3_B DNA damage-binding prot 95.5 0.02 6.7E-07 34.9 4.2 31 18-48 196-227 (383)
105 2pm9_A Protein WEB1, protein t 95.5 0.018 6E-07 35.1 3.9 26 24-49 65-90 (416)
106 3lrv_A PRE-mRNA-splicing facto 95.5 0.022 7.5E-07 34.7 4.4 30 20-49 119-150 (343)
107 1yfq_A Cell cycle arrest prote 95.5 0.02 6.7E-07 33.9 4.0 23 27-49 252-274 (342)
108 4aez_A CDC20, WD repeat-contai 95.4 0.035 1.2E-06 34.5 5.1 33 17-49 208-240 (401)
109 2vdu_B TRNA (guanine-N(7)-)-me 95.3 0.016 5.6E-07 36.6 3.5 25 24-48 100-125 (450)
110 3sfz_A APAF-1, apoptotic pepti 95.2 0.027 9.4E-07 39.5 4.5 30 20-49 1121-1150(1249)
111 3v7d_B Cell division control p 95.0 0.054 1.8E-06 33.8 5.1 32 17-49 153-184 (464)
112 1sq9_A Antiviral protein SKI8; 95.0 0.027 9.3E-07 34.1 3.6 24 26-49 354-387 (397)
113 3mkq_A Coatomer beta'-subunit; 94.9 0.02 6.9E-07 38.1 3.0 28 21-48 8-35 (814)
114 2vdu_B TRNA (guanine-N(7)-)-me 94.7 0.017 5.9E-07 36.5 2.3 28 22-49 191-221 (450)
115 2xyi_A Probable histone-bindin 94.7 0.074 2.5E-06 33.5 5.2 32 17-48 369-401 (430)
116 3jro_A Fusion protein of prote 94.5 0.061 2.1E-06 36.9 4.9 31 19-49 46-78 (753)
117 3mkq_A Coatomer beta'-subunit; 94.5 0.056 1.9E-06 36.0 4.5 32 17-48 88-119 (814)
118 2j04_B YDR362CP, TAU91; beta p 94.3 0.051 1.8E-06 36.5 4.1 26 24-49 205-236 (524)
119 2ovr_B FBW7, F-BOX/WD repeat p 93.9 0.03 1E-06 35.1 2.1 27 23-49 404-430 (445)
120 2hqs_A Protein TOLB; TOLB, PAL 93.7 0.051 1.8E-06 34.6 3.0 25 24-48 176-200 (415)
121 2ojh_A Uncharacterized protein 93.1 0.091 3.1E-06 29.8 3.1 23 23-45 38-60 (297)
122 2xyi_A Probable histone-bindin 92.8 0.087 3E-06 33.2 3.0 28 22-49 177-205 (430)
123 2ojh_A Uncharacterized protein 91.8 0.24 8E-06 28.1 3.8 29 19-47 209-237 (297)
124 2w18_A PALB2, fancn, partner a 91.4 0.12 4E-06 34.5 2.5 26 24-49 176-204 (356)
125 3hfq_A Uncharacterized protein 91.1 0.29 1E-05 29.3 3.8 24 25-48 284-307 (347)
126 1xfd_A DIP, dipeptidyl aminope 91.1 0.35 1.2E-05 31.9 4.5 19 30-48 176-194 (723)
127 2hqs_A Protein TOLB; TOLB, PAL 90.9 0.4 1.4E-05 30.5 4.5 25 24-48 220-245 (415)
128 1p22_A F-BOX/WD-repeat protein 90.4 0.58 2E-05 29.2 4.8 31 17-49 164-194 (435)
129 1xfd_A DIP, dipeptidyl aminope 90.2 0.43 1.5E-05 31.5 4.3 20 28-47 62-81 (723)
130 1k32_A Tricorn protease; prote 90.1 0.3 1E-05 34.5 3.7 25 23-47 49-73 (1045)
131 3o4h_A Acylamino-acid-releasin 90.1 0.45 1.5E-05 30.9 4.3 26 23-48 191-216 (582)
132 3azo_A Aminopeptidase; POP fam 90.0 0.21 7E-06 32.8 2.6 25 24-48 185-209 (662)
133 2ecf_A Dipeptidyl peptidase IV 89.3 0.35 1.2E-05 32.1 3.4 23 26-48 36-59 (741)
134 1pby_B Quinohemoprotein amine 88.6 0.33 1.1E-05 28.3 2.6 22 27-48 280-301 (337)
135 3scy_A Hypothetical bacterial 88.5 0.85 2.9E-05 27.5 4.5 22 26-47 258-279 (361)
136 2z3z_A Dipeptidyl aminopeptida 88.2 0.54 1.9E-05 31.1 3.7 25 24-48 255-279 (706)
137 3scy_A Hypothetical bacterial 88.1 0.8 2.7E-05 27.6 4.2 24 22-45 206-229 (361)
138 2z3z_A Dipeptidyl aminopeptida 88.0 0.55 1.9E-05 31.0 3.6 19 29-47 183-201 (706)
139 1ri6_A Putative isomerase YBHE 87.9 0.4 1.4E-05 28.0 2.7 23 25-47 36-58 (343)
140 1nir_A Nitrite reductase; hemo 87.8 0.62 2.1E-05 31.1 3.8 20 29-48 181-200 (543)
141 3bws_A Protein LP49; two-domai 87.7 0.56 1.9E-05 28.7 3.3 23 26-48 400-423 (433)
142 2gop_A Trilobed protease; beta 87.7 0.45 1.6E-05 28.3 2.9 21 27-47 59-79 (347)
143 2ecf_A Dipeptidyl peptidase IV 87.6 0.28 9.7E-06 32.5 2.1 20 29-48 211-230 (741)
144 3bws_A Protein LP49; two-domai 87.6 0.35 1.2E-05 29.7 2.3 25 24-48 167-191 (433)
145 1jof_A Carboxy-CIS,CIS-muconat 87.4 0.82 2.8E-05 28.1 4.0 22 26-47 192-213 (365)
146 1k32_A Tricorn protease; prote 86.3 1.2 4.1E-05 31.4 4.7 25 24-48 376-400 (1045)
147 1z68_A Fibroblast activation p 85.9 0.48 1.6E-05 31.5 2.4 19 30-48 172-190 (719)
148 1p22_A F-BOX/WD-repeat protein 85.8 1.4 4.8E-05 27.5 4.4 30 18-49 328-357 (435)
149 2gop_A Trilobed protease; beta 85.1 0.94 3.2E-05 26.9 3.3 18 29-46 106-123 (347)
150 3hfq_A Uncharacterized protein 85.0 1.9 6.4E-05 25.7 4.6 23 23-45 183-205 (347)
151 2ovr_B FBW7, F-BOX/WD repeat p 84.7 2.3 8E-05 26.3 5.1 31 17-49 150-180 (445)
152 1jof_A Carboxy-CIS,CIS-muconat 84.5 1.3 4.5E-05 27.1 3.8 22 25-46 143-164 (365)
153 3u4y_A Uncharacterized protein 84.4 1.6 5.4E-05 25.7 4.0 24 24-47 173-196 (331)
154 3azo_A Aminopeptidase; POP fam 84.4 1.1 3.8E-05 29.3 3.6 29 20-48 235-263 (662)
155 1l0q_A Surface layer protein; 83.1 1.3 4.4E-05 26.7 3.3 23 26-48 31-54 (391)
156 3o4h_A Acylamino-acid-releasin 83.0 0.87 3E-05 29.6 2.7 22 27-48 22-44 (582)
157 1l0q_A Surface layer protein; 82.7 2.6 8.7E-05 25.3 4.5 19 27-45 74-92 (391)
158 1ri6_A Putative isomerase YBHE 81.8 3.1 0.00011 24.1 4.6 24 22-45 173-196 (343)
159 2oiz_A Aromatic amine dehydrog 81.7 1.9 6.3E-05 26.9 3.8 18 29-46 307-324 (361)
160 3vgz_A Uncharacterized protein 81.3 1.9 6.4E-05 25.3 3.5 24 25-48 183-206 (353)
161 3pe7_A Oligogalacturonate lyas 80.8 1.4 4.8E-05 26.5 2.9 29 19-47 73-101 (388)
162 3c5m_A Oligogalacturonate lyas 80.2 1.3 4.5E-05 26.4 2.6 22 26-47 237-258 (396)
163 3pe7_A Oligogalacturonate lyas 79.5 2.6 9.1E-05 25.2 3.8 21 27-47 238-258 (388)
164 1jmx_B Amine dehydrogenase; ox 79.3 1.4 4.8E-05 25.8 2.5 22 27-48 295-316 (349)
165 4a5s_A Dipeptidyl peptidase 4 79.0 1.3 4.4E-05 30.1 2.5 19 30-48 174-192 (740)
166 3u4y_A Uncharacterized protein 79.0 4.6 0.00016 23.6 4.7 25 21-46 35-59 (331)
167 1z68_A Fibroblast activation p 78.9 1.3 4.5E-05 29.4 2.5 19 28-46 61-79 (719)
168 3vgz_A Uncharacterized protein 77.9 3.5 0.00012 24.1 4.0 23 25-47 229-251 (353)
169 2bkl_A Prolyl endopeptidase; m 77.2 3.9 0.00013 27.5 4.4 22 27-48 227-248 (695)
170 1nir_A Nitrite reductase; hemo 75.7 2.8 9.7E-05 27.9 3.4 23 24-46 476-498 (543)
171 3e5z_A Putative gluconolactona 73.2 4.2 0.00014 23.8 3.4 28 19-47 249-277 (296)
172 4a5s_A Dipeptidyl peptidase 4 73.0 5.3 0.00018 27.1 4.2 22 24-45 109-130 (740)
173 1yr2_A Prolyl oligopeptidase; 72.6 6.9 0.00024 26.5 4.8 21 28-48 269-289 (741)
174 2dg1_A DRP35, lactonase; beta 72.3 8.6 0.00029 22.6 4.7 23 24-46 84-106 (333)
175 2xdw_A Prolyl endopeptidase; a 71.3 3.3 0.00011 27.8 2.9 19 28-46 126-144 (710)
176 3g4e_A Regucalcin; six bladed 71.2 4.8 0.00016 24.0 3.4 29 17-45 231-260 (297)
177 2bkl_A Prolyl endopeptidase; m 71.0 3.5 0.00012 27.7 3.0 19 27-45 121-139 (695)
178 1qks_A Cytochrome CD1 nitrite 70.7 4.8 0.00016 27.4 3.7 22 27-48 197-218 (567)
179 3fvz_A Peptidyl-glycine alpha- 70.2 6 0.0002 23.9 3.7 22 26-47 23-44 (329)
180 3e5z_A Putative gluconolactona 69.5 8.2 0.00028 22.5 4.1 28 19-46 61-88 (296)
181 1xip_A Nucleoporin NUP159; bet 68.5 4.1 0.00014 26.8 2.9 21 26-48 162-182 (388)
182 2xdw_A Prolyl endopeptidase; a 68.4 3.3 0.00011 27.8 2.5 20 29-48 173-192 (710)
183 2qe8_A Uncharacterized protein 66.9 9.9 0.00034 23.2 4.2 22 27-48 195-216 (343)
184 1yr2_A Prolyl oligopeptidase; 66.3 5.1 0.00018 27.2 3.1 21 27-47 163-183 (741)
185 2dg1_A DRP35, lactonase; beta 66.1 11 0.00036 22.2 4.2 26 23-48 41-66 (333)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 66.1 8.9 0.0003 22.2 3.8 24 23-46 264-287 (314)
187 2ghs_A AGR_C_1268P; regucalcin 65.9 12 0.00041 22.6 4.5 28 19-46 263-291 (326)
188 3iuj_A Prolyl endopeptidase; h 61.5 7.3 0.00025 26.4 3.1 21 25-45 127-147 (693)
189 3dr2_A Exported gluconolactona 59.5 11 0.00038 22.4 3.4 20 28-47 278-297 (305)
190 1q7f_A NHL, brain tumor CG1071 58.1 14 0.00048 21.2 3.6 21 27-47 207-227 (286)
191 2mad_H Methylamine dehydrogena 56.6 8.6 0.00029 24.4 2.7 20 28-47 319-339 (373)
192 2ece_A 462AA long hypothetical 55.6 7.9 0.00027 26.6 2.5 22 27-48 321-342 (462)
193 3ei3_A DNA damage-binding prot 49.8 12 0.00042 27.9 2.9 23 26-48 553-582 (1158)
194 1rwi_B Serine/threonine-protei 49.1 34 0.0011 19.2 4.6 22 27-48 234-255 (270)
195 2xe4_A Oligopeptidase B; hydro 45.3 27 0.00094 24.1 3.9 22 27-48 271-292 (751)
196 1mda_H Methylamine dehydrogena 43.0 16 0.00056 23.5 2.4 20 28-47 125-144 (368)
197 1xip_A Nucleoporin NUP159; bet 42.5 16 0.00055 24.0 2.3 24 25-48 36-59 (388)
198 3dsm_A Uncharacterized protein 39.7 45 0.0015 20.1 3.9 19 26-44 224-242 (328)
199 2z2n_A Virginiamycin B lyase; 38.5 50 0.0017 18.5 3.8 21 25-45 13-33 (299)
200 3c75_H MADH, methylamine dehyd 34.7 35 0.0012 22.6 3.0 20 28-47 371-391 (426)
201 2iwa_A Glutamine cyclotransfer 30.8 67 0.0023 19.9 3.8 21 25-45 204-224 (266)
202 3nol_A Glutamine cyclotransfer 29.2 72 0.0025 20.1 3.7 22 24-45 222-243 (262)
203 2xbg_A YCF48-like protein; pho 28.5 96 0.0033 18.8 4.2 25 20-44 156-180 (327)
204 3qqz_A Putative uncharacterize 27.5 1.1E+02 0.0038 18.7 4.5 21 26-46 26-46 (255)
205 3sjl_D Methylamine dehydrogena 24.9 67 0.0023 21.1 3.1 20 28-47 332-352 (386)
206 2p4o_A Hypothetical protein; p 24.2 1.2E+02 0.004 17.9 3.9 23 25-47 253-278 (306)
207 3no2_A Uncharacterized protein 23.5 1.2E+02 0.0042 17.9 4.0 20 27-46 77-96 (276)
208 3sre_A PON1, serum paraoxonase 23.2 63 0.0021 20.9 2.7 16 29-44 223-238 (355)
209 3hrp_A Uncharacterized protein 20.9 62 0.0021 20.5 2.3 17 32-48 176-192 (409)
210 3mbr_X Glutamine cyclotransfer 20.5 1.3E+02 0.0045 18.5 3.7 22 24-45 201-222 (243)
211 1fwx_A Nitrous oxide reductase 20.5 56 0.0019 23.1 2.1 19 28-46 278-296 (595)
212 3pe9_A Fibronectin(III)-like m 20.2 1.1E+02 0.0039 16.3 3.2 23 24-46 26-49 (98)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.05 E-value=4.2e-06 Score=52.68 Aligned_cols=30 Identities=20% Similarity=0.242 Sum_probs=27.1
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
++...|.+.|.+|+|||++++||++|+|++
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred EecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 356789999999999999999999999985
No 2
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.81 E-value=2.7e-05 Score=45.93 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=28.0
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....|.+.|.+|+|+|++++|+++|+|++
T Consensus 275 ~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 275 AKVAELKGHTSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 344445678999999999999999999999974
No 3
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.72 E-value=2.8e-05 Score=46.42 Aligned_cols=32 Identities=31% Similarity=0.691 Sum_probs=29.4
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+.+++..+|.+.|.+|+|+|++++|++++.|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~ 33 (342)
T 1yfq_A 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDG 33 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred cceecccCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 46788889999999999999999999999987
No 4
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.70 E-value=5e-05 Score=45.99 Aligned_cols=30 Identities=7% Similarity=0.111 Sum_probs=26.9
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+...+.+.|.+++|+|++++||++|+|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~ 32 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKT 32 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCE
Confidence 456788999999999999999999999974
No 5
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.60 E-value=0.00011 Score=43.69 Aligned_cols=28 Identities=14% Similarity=0.342 Sum_probs=25.1
Q ss_pred cCCCCCCeEEEEEcCC-CCeEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSPK-ANILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~-~~~La~sSWD~~ 49 (49)
...|++.|.+|+|+|+ +++|+++|.|++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~ 62 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKT 62 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSC
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 4689999999999998 689999999974
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.52 E-value=0.00012 Score=45.64 Aligned_cols=32 Identities=25% Similarity=0.468 Sum_probs=27.5
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|++|+|+|++++|+++|+|++
T Consensus 318 ~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 318 RVSILFGHENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred eEEEEECCCCcEEEEEECCCCCEEEEEcCCCC
Confidence 34455678999999999999999999999974
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.49 E-value=8.4e-05 Score=46.50 Aligned_cols=27 Identities=26% Similarity=0.486 Sum_probs=24.9
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.+.|++|+|+|++++|+++|||++
T Consensus 341 ~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 341 NSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp SSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred CCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 568899999999999999999999984
No 8
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.43 E-value=0.00017 Score=45.37 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=27.8
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....|.+.|.+|+|+|++++|+++|+|++
T Consensus 355 ~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 355 AKVAELKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 334445678999999999999999999999974
No 9
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.42 E-value=7.9e-05 Score=45.56 Aligned_cols=29 Identities=17% Similarity=0.121 Sum_probs=21.8
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+...|.+.|.+|+|+|++++||++|+|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~ 36 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRS 36 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCe
Confidence 34578999999999999999999999974
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.41 E-value=0.00011 Score=44.66 Aligned_cols=29 Identities=21% Similarity=0.331 Sum_probs=25.5
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
....+.+.|.+|+|+|++++|+++++|++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~ 36 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGR 36 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSE
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCc
Confidence 34578899999999999999999999973
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.40 E-value=0.00026 Score=43.74 Aligned_cols=29 Identities=28% Similarity=0.463 Sum_probs=25.8
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+...+.+.|.+|+|+|++++|+++|+|++
T Consensus 56 ~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 56 LSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp ECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 34678899999999999999999999974
No 12
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.36 E-value=0.00023 Score=45.61 Aligned_cols=27 Identities=30% Similarity=0.428 Sum_probs=24.7
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 22 SQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
...|++.|++|+|||++++||+++-|+
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~ 38 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDK 38 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 468999999999999999999998776
No 13
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.35 E-value=0.00034 Score=41.60 Aligned_cols=35 Identities=54% Similarity=0.937 Sum_probs=30.8
Q ss_pred CCCceEEecCCCCCCeEEEEEcCC---CCeEEEEeccC
Q 045898 14 NPNKSIEVSQPPSDSVSSLCFSPK---ANILVATSWDN 48 (49)
Q Consensus 14 ~~~~~~~l~~~p~D~IS~l~Fsp~---~~~La~sSWD~ 48 (49)
.+.+.+++...|.+.|.+|+|+|+ +++|++++.|+
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg 64 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWAN 64 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTS
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCC
Confidence 345788889999999999999999 59999999886
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.34 E-value=0.0003 Score=43.28 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=27.5
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+|+|++++|+++|+|++
T Consensus 304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred EeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 34445678999999999999999999999984
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.33 E-value=0.00024 Score=44.37 Aligned_cols=32 Identities=31% Similarity=0.352 Sum_probs=27.8
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.......+.+.|.+|+|+|++++|+++|+|++
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~ 89 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGR 89 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCe
Confidence 34556789999999999999999999999974
No 16
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.33 E-value=0.00025 Score=44.63 Aligned_cols=27 Identities=19% Similarity=0.363 Sum_probs=24.3
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.+.|++|+|+|++++||+++.|++
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~ 170 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAE 170 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCe
Confidence 457789999999999999999999974
No 17
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.30 E-value=0.00033 Score=43.61 Aligned_cols=31 Identities=10% Similarity=0.189 Sum_probs=27.3
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++||++|.|++
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 4455688999999999999999999999984
No 18
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.28 E-value=0.00028 Score=41.21 Aligned_cols=29 Identities=14% Similarity=0.126 Sum_probs=26.0
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+...+.+.|.+|+|+|++++|++++.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg 33 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQ 33 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCC
Confidence 44568899999999999999999999987
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.27 E-value=0.00016 Score=45.21 Aligned_cols=22 Identities=14% Similarity=0.224 Sum_probs=20.2
Q ss_pred CCCCCeEEEEEcCCCCeEEEEe
Q 045898 24 PPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sS 45 (49)
.+...|.+|+|||+|++||++|
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s 61 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAAS 61 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEc
Confidence 4678999999999999999998
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.21 E-value=0.00047 Score=42.31 Aligned_cols=31 Identities=16% Similarity=0.283 Sum_probs=23.1
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|+++|.|++
T Consensus 100 ~~~~~~h~~~V~~v~~sp~g~~las~s~D~~ 130 (330)
T 2hes_X 100 LAIIEGHENEVKGVAWSNDGYYLATCSRDKS 130 (330)
T ss_dssp EEEEC----CEEEEEECTTSCEEEEEETTSC
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEeCCCE
Confidence 3345678899999999999999999999974
No 21
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.18 E-value=0.0004 Score=40.85 Aligned_cols=27 Identities=19% Similarity=0.363 Sum_probs=24.2
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.+.|.+|+|+|++++|+++|.|++
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAE 90 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 467789999999999999999999973
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.17 E-value=0.0004 Score=46.21 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=27.2
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.......+.+.|.+|+|||++++||+++.|++
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~ 82 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN 82 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCC
Confidence 34455678999999999999999999999873
No 23
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.17 E-value=0.0007 Score=39.46 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=27.5
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+|++++|++++.|+.
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~ 329 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGK 329 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSCCEEEEETTSC
T ss_pred cEEEEEecccccEEEEEEcCCCCEEEEecCCCc
Confidence 334445678899999999999999999999974
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.16 E-value=0.00079 Score=40.75 Aligned_cols=32 Identities=16% Similarity=0.169 Sum_probs=27.1
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+|+|++++|+++|+|++
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 120 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCe
Confidence 34444578899999999999999999999974
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.14 E-value=0.00052 Score=42.85 Aligned_cols=27 Identities=22% Similarity=0.538 Sum_probs=24.0
Q ss_pred CCCCCCeEEEEEcC-CCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSP-KANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp-~~~~La~sSWD~~ 49 (49)
..+.+.|.+|+|+| ++++|+++|+|++
T Consensus 308 ~~H~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 308 LSHRDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp CCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 36889999999999 6899999999984
No 26
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.00038 Score=41.66 Aligned_cols=31 Identities=10% Similarity=0.150 Sum_probs=26.5
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+...+.+.|.+|+|+|++++|++++.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~ 34 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKT 34 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCc
Confidence 3456678999999999999999999999874
No 27
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.13 E-value=0.00067 Score=42.56 Aligned_cols=27 Identities=22% Similarity=0.214 Sum_probs=24.1
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+...|.+|+|||++++||++|.|++
T Consensus 266 ~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred cCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 456789999999999999999999974
No 28
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.12 E-value=0.00054 Score=43.08 Aligned_cols=27 Identities=22% Similarity=0.090 Sum_probs=24.6
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+++.|.+|+|+|++++|++++.|++
T Consensus 124 ~~H~~~V~~v~~spdg~~l~sgs~d~~ 150 (344)
T 4gqb_B 124 YEHDDIVSTVSVLSSGTQAVSGSKDIC 150 (344)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 368899999999999999999999974
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.00084 Score=41.19 Aligned_cols=31 Identities=29% Similarity=0.514 Sum_probs=26.8
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|+++|+|++
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEeccCCCceEEEEECCCCCEEEEEcCCCe
Confidence 4445678899999999999999999999974
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.10 E-value=0.00079 Score=43.12 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=27.7
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 540 ~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 540 QLLQTLTGHSSSVWGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence 334445678999999999999999999999974
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.10 E-value=0.00085 Score=41.38 Aligned_cols=31 Identities=23% Similarity=0.437 Sum_probs=26.8
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|+++|+|++
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~ 128 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRDKS 128 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECCCe
Confidence 3445678899999999999999999999974
No 32
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.09 E-value=0.0007 Score=40.15 Aligned_cols=27 Identities=26% Similarity=0.292 Sum_probs=23.6
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.+.|.+|+|+|++++|++++.|++
T Consensus 303 ~~h~~~v~~l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 303 KAEPPQCTSLAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 356789999999999999999999974
No 33
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.09 E-value=0.00089 Score=41.10 Aligned_cols=33 Identities=9% Similarity=0.232 Sum_probs=28.1
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.......+.+.|.+|+|+|++++|+++|.|++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~ 78 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGK 78 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 444556789999999999999999999999973
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.06 E-value=0.0007 Score=42.12 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=28.1
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.......+.+.|.+|+|+|++++|+++|.|++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~ 87 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGK 87 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCe
Confidence 344555689999999999999999999999873
No 35
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.05 E-value=0.0012 Score=39.88 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=29.4
Q ss_pred CceEEecCCCCCCeEEEEEcC-CCCeEEEEeccCC
Q 045898 16 NKSIEVSQPPSDSVSSLCFSP-KANILVATSWDNQ 49 (49)
Q Consensus 16 ~~~~~l~~~p~D~IS~l~Fsp-~~~~La~sSWD~~ 49 (49)
.+..++...+.+.|.+|+|+| ++++|++++.|++
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~ 67 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGV 67 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSC
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCe
Confidence 355677788999999999999 9999999998874
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.96 E-value=0.00087 Score=40.92 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=25.7
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
....+.+.|.+++|+|++++|+++|+|++
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 34578999999999999999999999974
No 37
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.95 E-value=0.0016 Score=40.91 Aligned_cols=29 Identities=34% Similarity=0.559 Sum_probs=24.3
Q ss_pred ecCCCCCCeEEEEEcCCCC-eEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSPKAN-ILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~-~La~sSWD~~ 49 (49)
....+.+.|.+|+|+|+++ +|+++|||++
T Consensus 294 ~~~~H~~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 294 RSQAHRDFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp EECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEcCCCCCEEEEEEeCCCCeEEEEEcCCCe
Confidence 3467899999999999985 6778899985
No 38
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.91 E-value=0.0016 Score=41.21 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=26.9
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
......+.+.|.+|+|+|++++|+++|+|++
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~ 173 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMT 173 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 3445678999999999999999999999974
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.90 E-value=0.0015 Score=43.49 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=26.3
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.....+.+.|.+|+|+|++++||++|.|++
T Consensus 184 ~~l~~H~~~V~~v~fspdg~~las~s~D~~ 213 (611)
T 1nr0_A 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGT 213 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeccccCceEEEEECCCCCEEEEEECCCc
Confidence 344678899999999999999999999974
No 40
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.90 E-value=0.00088 Score=44.77 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=24.1
Q ss_pred ceEEecCCCCCC-eEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDS-VSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~-IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+....++.+. ++.|+|||++++|+++|+|++
T Consensus 316 k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T 349 (356)
T 2w18_A 316 QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN 349 (356)
T ss_dssp SEEEEECCC--CCCCEEEECSSSSEEEEECTTSC
T ss_pred cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 334444566665 567999999999999999985
No 41
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.89 E-value=0.00058 Score=42.19 Aligned_cols=25 Identities=16% Similarity=0.290 Sum_probs=22.8
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+.|.|++|+|+|++++||+++.|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg 50 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGG 50 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTS
T ss_pred cccCcEEEEEECCCCCEEEEEcCCC
Confidence 3569999999999999999999987
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.89 E-value=0.0013 Score=39.25 Aligned_cols=28 Identities=32% Similarity=0.374 Sum_probs=25.1
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
...+.+.|.+|+|+|++++|++++.|++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~ 46 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKL 46 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCe
Confidence 3578999999999999999999999874
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.88 E-value=0.0014 Score=40.13 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=26.2
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.....+.+.|.+|+|+|++++|+++|+|++
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~ 99 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKT 99 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSE
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCc
Confidence 345678899999999999999999999973
No 44
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.0018 Score=38.41 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=26.3
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 308 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhheecccCcEEEEEECCCCCEEEEEcCCCe
Confidence 4444568899999999999999999999873
No 45
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.83 E-value=0.0023 Score=38.55 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=27.7
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+|++++|++++.|+.
T Consensus 325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 357 (408)
T 4a11_B 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCN 357 (408)
T ss_dssp CEEEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred cceeeeccCCCeEEEEEEcCCCCEEEEECCCCe
Confidence 344455678899999999999999999999974
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.82 E-value=0.0011 Score=41.93 Aligned_cols=27 Identities=26% Similarity=0.416 Sum_probs=23.8
Q ss_pred CCCCCCeEEEEEcC-CCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSP-KANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp-~~~~La~sSWD~~ 49 (49)
..|.+.|.+|+|+| ++++|+++|+|++
T Consensus 161 ~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 161 IGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp CSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred cCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 46889999999999 5789999999974
No 47
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.0015 Score=40.68 Aligned_cols=30 Identities=20% Similarity=0.270 Sum_probs=26.0
Q ss_pred EecCCCCCCeEEEEEcC-CCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSP-KANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp-~~~~La~sSWD~~ 49 (49)
++...+.+.|.+|+|+| ++++|++++.|++
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~ 87 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGV 87 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSE
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCce
Confidence 34377889999999999 9999999999973
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.77 E-value=0.0016 Score=39.53 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=26.2
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~ 78 (377)
T 3dwl_C 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRN 78 (377)
T ss_dssp CCCBCCCSSCEEEEEECTTTCCEEEEETTSS
T ss_pred EEEEecCCceEEEEEEeCCCCEEEEEeCCCe
Confidence 3344568899999999999999999999974
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.75 E-value=0.0023 Score=39.24 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=27.8
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~ 162 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSGEALISSSQDMQ 162 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeeecccccCccEEEEECCCCCEEEEEeCCCe
Confidence 445555688999999999999999999999873
No 50
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.74 E-value=0.0024 Score=38.10 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=27.1
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+.......+...|.+|+|+|++++|++++.|+
T Consensus 56 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 56 KFEKTISGHKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ccchhhccCCCceEEEEEcCCCCEEEEECCCC
Confidence 34445567889999999999999999999986
No 51
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.003 Score=37.43 Aligned_cols=28 Identities=11% Similarity=0.232 Sum_probs=24.9
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
...+.+.|.+|+|+|++++|++++.|+.
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~ 55 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSS 55 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSC
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCE
Confidence 3578999999999999999999998863
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.67 E-value=0.0016 Score=41.27 Aligned_cols=28 Identities=18% Similarity=0.308 Sum_probs=23.5
Q ss_pred cCCCCCCeEEEEEcCC-CCeEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSPK-ANILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~-~~~La~sSWD~~ 49 (49)
..++++.|++|+|+|. .++||+|+.|++
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~ 143 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGD 143 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSC
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 4467789999999995 579999999974
No 53
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.67 E-value=0.0019 Score=40.86 Aligned_cols=31 Identities=26% Similarity=0.260 Sum_probs=26.5
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|+++|+|++
T Consensus 373 ~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~ 403 (410)
T 1vyh_C 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403 (410)
T ss_dssp CEEEECCSSCEEEEEECSSSSCEEEEETTSE
T ss_pred EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 3444578899999999999999999999974
No 54
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.0018 Score=45.90 Aligned_cols=26 Identities=12% Similarity=0.121 Sum_probs=24.1
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.+.|.+|+|||++++||++++|++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~Dgt 511 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGD 511 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSC
T ss_pred CCCCceeEEEecCCCCeEEEEecCcE
Confidence 67789999999999999999999985
No 55
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.61 E-value=0.003 Score=39.27 Aligned_cols=25 Identities=16% Similarity=0.082 Sum_probs=23.2
Q ss_pred CCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 25 PSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.|.+|+|+|++++|+++|.|++
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCE
Confidence 7899999999999999999999873
No 56
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.61 E-value=0.0042 Score=38.18 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=26.4
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 241 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 241 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 4445678899999999999999999999974
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.60 E-value=0.0032 Score=37.90 Aligned_cols=29 Identities=24% Similarity=0.332 Sum_probs=24.7
Q ss_pred ecCCCCCCeEEEEEcCCC---CeEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSPKA---NILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~---~~La~sSWD~~ 49 (49)
....+.+.|.+|+|+|++ ++||++|+|++
T Consensus 199 ~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 199 TLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred EecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence 345788999999999985 79999999974
No 58
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.58 E-value=0.004 Score=38.13 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=26.6
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 110 ~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 110 TYKRFVGHQSEVYSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp EEEEEECCCSCEEEEEECSSTTEEEEEETTSC
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE
Confidence 34444578899999999999999999998874
No 59
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.56 E-value=0.0046 Score=37.79 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=27.7
Q ss_pred ceEEecCCCCCCeEEEEEcCCC-CeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKA-NILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~-~~La~sSWD~~ 49 (49)
..+....++.+.|.+|+|+|++ ++|++++.|++
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 97 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGD 97 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSC
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCe
Confidence 3345557889999999999998 89999999874
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.53 E-value=0.0021 Score=39.16 Aligned_cols=27 Identities=33% Similarity=0.357 Sum_probs=23.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.+.|.+|+|+|++++||+++.|++
T Consensus 259 ~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 259 HKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp EECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred hcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 346789999999999999999999874
No 61
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.53 E-value=0.0022 Score=40.39 Aligned_cols=27 Identities=7% Similarity=0.186 Sum_probs=22.9
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 22 SQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
...+...|.+|+|||++++||++|-|+
T Consensus 355 ~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 355 PIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 345678999999999999999998764
No 62
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.49 E-value=0.0029 Score=37.60 Aligned_cols=30 Identities=27% Similarity=0.412 Sum_probs=25.0
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEE-EEeccC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILV-ATSWDN 48 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La-~sSWD~ 48 (49)
+.....+.+.|.+|+|+|++++|+ +++.|+
T Consensus 314 ~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~ 344 (357)
T 3i2n_A 314 LQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ 344 (357)
T ss_dssp EEEEECCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred eeccccCCCCeeEEEEcCCCCeEEEEecCCC
Confidence 444556789999999999999998 789886
No 63
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.48 E-value=0.003 Score=44.69 Aligned_cols=30 Identities=7% Similarity=-0.074 Sum_probs=25.9
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|||+| +||+++.|++
T Consensus 568 ~~~l~~h~~~V~svafSpdG-~lAsgs~D~t 597 (902)
T 2oaj_A 568 STAVHANKGKTSAINNSNIG-FVGIAYAAGS 597 (902)
T ss_dssp EEEECCCSCSEEEEEECBTS-EEEEEETTSE
T ss_pred eEEEEcCCCcEEEEEecCCc-EEEEEeCCCc
Confidence 44556789999999999999 9999999873
No 64
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.47 E-value=0.0063 Score=37.35 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=26.5
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 283 ~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 283 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 4444578899999999999999999999974
No 65
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.45 E-value=0.0056 Score=37.28 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=27.1
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+|+|++++|+++|+|++
T Consensus 99 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 99 TYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 34444578899999999999999999999974
No 66
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.44 E-value=0.0011 Score=41.67 Aligned_cols=28 Identities=7% Similarity=0.099 Sum_probs=24.6
Q ss_pred cCCCCCCeEEEEEcC--------CCCeEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSP--------KANILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp--------~~~~La~sSWD~~ 49 (49)
...|++.|.+|+|+| ++++||++|+|++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t 167 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT 167 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence 467899999999998 6789999999974
No 67
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.42 E-value=0.0054 Score=37.19 Aligned_cols=30 Identities=23% Similarity=0.394 Sum_probs=25.5
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+..++.+.|.+|+|+|++++|++++.|++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 344448899999999999999999999874
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.41 E-value=0.0033 Score=42.11 Aligned_cols=29 Identities=21% Similarity=0.346 Sum_probs=25.6
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
....|.+.|.+|+|+|++++|+++|+|++
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 34578899999999999999999999973
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.36 E-value=0.0085 Score=35.54 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=27.2
Q ss_pred ceEEecCCCCCCeEEEEEcC-CCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSP-KANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp-~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+| ++++|++++.|++
T Consensus 106 ~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~ 139 (366)
T 3k26_A 106 QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHA 139 (366)
T ss_dssp CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 44445557889999999999 8899999999874
No 70
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.33 E-value=0.0062 Score=38.11 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=27.5
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 156 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 188 (393)
T 1erj_A 156 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 188 (393)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCc
Confidence 334555678999999999999999999998863
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.29 E-value=0.004 Score=38.61 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=25.0
Q ss_pred ecCCCCCCeEEEEEcC-CCCeEEEEeccCC
Q 045898 21 VSQPPSDSVSSLCFSP-KANILVATSWDNQ 49 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp-~~~~La~sSWD~~ 49 (49)
....+.+.|.+|+|+| ++++|++++.|++
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~ 105 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCT 105 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSE
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCe
Confidence 3456889999999999 8899999999873
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.27 E-value=0.0056 Score=37.55 Aligned_cols=30 Identities=10% Similarity=0.163 Sum_probs=25.8
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.....+.+.|.+|+|+|++++|++++.|++
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 334578899999999999999999999974
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.25 E-value=0.0069 Score=36.22 Aligned_cols=32 Identities=16% Similarity=0.303 Sum_probs=26.6
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~ 75 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRN 75 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCe
Confidence 34444578899999999999999999998874
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.25 E-value=0.0028 Score=37.93 Aligned_cols=28 Identities=4% Similarity=0.039 Sum_probs=24.2
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+...+.+.|.+++|+|++++|++++-|+
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~ 30 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNH 30 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSS
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCC
Confidence 4455889999999999999999998776
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.23 E-value=0.0082 Score=35.51 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=25.5
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+.+.....+...|.+|+|+|++++|+++|-|+
T Consensus 306 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 306 TKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred cEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 34455567789999999999999999987553
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.21 E-value=0.0083 Score=35.59 Aligned_cols=24 Identities=25% Similarity=0.375 Sum_probs=22.2
Q ss_pred CCCeEEEEEcCCCCeEEEEeccCC
Q 045898 26 SDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
...|.+|+|+|++++|++++.|++
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~ 358 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDAS 358 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCceEEEEeCCCCCeEEEEeCCCE
Confidence 699999999999999999999873
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.0027 Score=42.73 Aligned_cols=26 Identities=15% Similarity=0.215 Sum_probs=23.9
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.+.|.+|+|||++++|+++|.|++
T Consensus 395 gH~~~V~sva~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 395 SRETTITAIGVSRLHPMVLAGSADGS 420 (524)
T ss_dssp ECSSCEEEEECCSSCCBCEEEETTTE
T ss_pred cCCCceEEEEeCCCCCeEEEEECCCE
Confidence 57899999999999999999999974
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.13 E-value=0.01 Score=36.93 Aligned_cols=27 Identities=19% Similarity=0.117 Sum_probs=23.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.+.|.+|+|+|++++|++++.|+.
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~ 157 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGL 157 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCe
Confidence 347899999999999999999999874
No 79
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.01 Score=35.37 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=26.0
Q ss_pred EEecCCCCCCeEEEEEcCC--CCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPK--ANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~--~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|+ +++|++++.|++
T Consensus 48 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 48 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 3445678899999999987 899999999974
No 80
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.07 E-value=0.0059 Score=43.11 Aligned_cols=26 Identities=15% Similarity=0.023 Sum_probs=23.8
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.|.+.|.+++|||++++||++|.|++
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~ 108 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGN 108 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 55899999999999999999999974
No 81
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.0092 Score=34.74 Aligned_cols=31 Identities=10% Similarity=0.059 Sum_probs=26.7
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+.+.....+.+.|.+|+| |++++|++++.|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg 39 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDG 39 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTS
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCC
Confidence 445556789999999999 9999999999987
No 82
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.0051 Score=43.43 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=20.8
Q ss_pred CCeEEEEEcCCCCeEEEEeccCC
Q 045898 27 DSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..|.+|+|||++++||+++.|++
T Consensus 130 ~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 130 RTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp TCEEEEEECSSSSCEEEEETTSE
T ss_pred ccEEEEEEcCCCCEEEEEcCCCE
Confidence 36999999999999999998874
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.97 E-value=0.011 Score=39.52 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=27.0
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+|+|++++|++++.|++
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 34445678899999999999999999999873
No 84
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.011 Score=34.34 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=26.3
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.......+...|.+|+|+|++++|++++.|+.
T Consensus 51 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 82 (313)
T 3odt_A 51 LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTM 82 (313)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEETTSC
T ss_pred EEEEeecCCccEEEEEECCCCCEEEEecCCCe
Confidence 34445567899999999999999999998863
No 85
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.96 E-value=0.0075 Score=39.16 Aligned_cols=31 Identities=10% Similarity=0.195 Sum_probs=25.9
Q ss_pred EEecCCCCCCeEEEEEcCC-CCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPK-ANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~-~~~La~sSWD~~ 49 (49)
+.+...+.+.|.+|+|+|+ +++|+++++|++
T Consensus 142 ~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 142 HKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp EECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred eeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 4455567899999999998 789999999974
No 86
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.95 E-value=0.017 Score=34.80 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=25.9
Q ss_pred eEEecCCCCC--CeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSD--SVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D--~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+ .|.+++|+|++++|++++.|++
T Consensus 384 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 384 LYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQE 417 (425)
T ss_dssp EEEEECCTTCCCCEEEEEECTTSSEEEEEESSSC
T ss_pred hhhhhcCcccCCceEEEEccCCCceEEEEecCce
Confidence 4445556655 9999999999999999999874
No 87
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.95 E-value=0.0077 Score=37.68 Aligned_cols=27 Identities=30% Similarity=0.362 Sum_probs=23.9
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.+.|.+|+|+|++++|++++.|++
T Consensus 253 ~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 253 TGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 457799999999999999999998863
No 88
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.84 E-value=0.013 Score=35.57 Aligned_cols=32 Identities=25% Similarity=0.316 Sum_probs=27.2
Q ss_pred eEEecCCCCCCeEEEEEcCC-CCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPK-ANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~-~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+|+|+ +++|++++.|++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~ 137 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGE 137 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSC
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCe
Confidence 55556678899999999998 799999998874
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.80 E-value=0.0063 Score=36.09 Aligned_cols=27 Identities=7% Similarity=0.124 Sum_probs=21.1
Q ss_pred EecCCCCCCeEEEEEcCCCC-eEEEEec
Q 045898 20 EVSQPPSDSVSSLCFSPKAN-ILVATSW 46 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~-~La~sSW 46 (49)
.+...+.+.|.+|+|+|+++ +|+++++
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~ 39 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNF 39 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC-
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCc
Confidence 34456899999999999985 6677877
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.023 Score=34.19 Aligned_cols=33 Identities=9% Similarity=0.144 Sum_probs=27.2
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+...|.+|+|+|++++|++++.|+.
T Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (425)
T 1r5m_A 140 ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENV 172 (425)
T ss_dssp CEEEEECCCCSCEEEEEECTTSSEEEEEETTCC
T ss_pred CeeeeccCCCccEEEEEECCCCCEEEEEecCCe
Confidence 344555678899999999999999999998863
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.75 E-value=0.011 Score=37.61 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=27.4
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+|+++ |++++.|++
T Consensus 575 ~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 575 KIIKALNAHKDGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp CCEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred eechhhhcCccceEEEEEcCCCC-eEEecCCce
Confidence 45666677899999999999999 999999874
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.74 E-value=0.013 Score=35.49 Aligned_cols=24 Identities=33% Similarity=0.558 Sum_probs=22.5
Q ss_pred CCCCeEEEEEcCCCCeEEEEeccC
Q 045898 25 PSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+.+.|.+|+|+|++++|++++.|+
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTS
T ss_pred cCCcEEEEEECCCCCEEEEEeCCC
Confidence 689999999999999999999886
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.73 E-value=0.0052 Score=42.14 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=23.4
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+...+.+.|.+|+|+|++++|++++.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~ 32 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKT 32 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCc
Confidence 456789999999999999999999998873
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.72 E-value=0.014 Score=35.95 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=23.9
Q ss_pred CCCCCCeEEEEEcCCC-CeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKA-NILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~-~~La~sSWD~~ 49 (49)
..+.+.|.+|+|+|++ ++|++++.|++
T Consensus 223 ~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 223 EELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp GGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred cccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 3578899999999998 99999999974
No 95
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.70 E-value=0.018 Score=35.67 Aligned_cols=26 Identities=15% Similarity=0.308 Sum_probs=23.9
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..+.+.|.+|+|+|++++|++++.|+
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred CCCCCceEEEEECCCCCEEEEEecCC
Confidence 56889999999999999999999886
No 96
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.65 E-value=0.022 Score=33.31 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=26.3
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+.+.....+.+.|.+|+|+|++++|++++.|+
T Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 205 (337)
T 1gxr_A 174 TLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205 (337)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeeeeecccCceEEEEECCCCCEEEEEecCC
Confidence 33444556889999999999999999999886
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.016 Score=35.89 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=22.9
Q ss_pred CCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 25 PSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.|.+|+|+|++++|++++.|++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~ 237 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGI 237 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSC
T ss_pred CCCceEEEEECCCCCEEEEEcCCCe
Confidence 6799999999999999999999874
No 98
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.64 E-value=0.026 Score=33.04 Aligned_cols=27 Identities=30% Similarity=0.215 Sum_probs=24.0
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 22 SQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
...+...|.+++|+|++++|++++.|+
T Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 261 LHLHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EcCCccceeEEEECCCCCEEEEecCCC
Confidence 356788999999999999999999886
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.62 E-value=0.023 Score=36.22 Aligned_cols=32 Identities=19% Similarity=0.214 Sum_probs=26.6
Q ss_pred ceEEecCCCCCC-eEEEEEcC--CCCeEEEEeccC
Q 045898 17 KSIEVSQPPSDS-VSSLCFSP--KANILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~-IS~l~Fsp--~~~~La~sSWD~ 48 (49)
+.+.....+.+. |.+|+|+| ++++|++++-|+
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg 88 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESG 88 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTS
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCC
Confidence 344555678889 99999999 999999999886
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.60 E-value=0.015 Score=40.83 Aligned_cols=28 Identities=25% Similarity=0.477 Sum_probs=25.1
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..++.+.|.+++|||++++|++++.|++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~ 638 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKT 638 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCe
Confidence 4578899999999999999999998874
No 101
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.58 E-value=0.0089 Score=38.79 Aligned_cols=26 Identities=31% Similarity=0.606 Sum_probs=23.2
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
++.+.|.+|+|+|++++|++++.|++
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~ 215 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGT 215 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCc
Confidence 46789999999999999999998874
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.55 E-value=0.019 Score=35.00 Aligned_cols=26 Identities=19% Similarity=0.009 Sum_probs=22.4
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+...|.+++|+|++++|++++.|++
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCE
Confidence 34568999999999999999998874
No 103
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.51 E-value=0.025 Score=35.37 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=27.4
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+++|+|++++|++++.|++
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~ 333 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISASMDTT 333 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc
Confidence 334445678899999999999999999999874
No 104
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.50 E-value=0.02 Score=34.94 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=25.6
Q ss_pred eEEecCCCCCCeEEEEEcCCCC-eEEEEeccC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKAN-ILVATSWDN 48 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~-~La~sSWD~ 48 (49)
.+.....+.+.|.+|+|+|+++ +|++++.|+
T Consensus 196 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 196 EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp EEEEEECSSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEEeccCCCcEEEEEECCCCCCEEEEEeCCC
Confidence 3344456889999999999998 899999886
No 105
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.50 E-value=0.018 Score=35.05 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=22.9
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.+.|.+|+|+|++++|++++.|++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCe
Confidence 46789999999999999999998863
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.022 Score=34.67 Aligned_cols=30 Identities=3% Similarity=0.055 Sum_probs=24.1
Q ss_pred EecCCCCCCeEEEEEcC--CCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSP--KANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp--~~~~La~sSWD~~ 49 (49)
.+..++.+.|.+|+|+| ++++|++++.|++
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~ 150 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGT 150 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCC
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc
Confidence 33446678999999999 9999999999974
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.46 E-value=0.02 Score=33.93 Aligned_cols=23 Identities=30% Similarity=0.418 Sum_probs=20.7
Q ss_pred CCeEEEEEcCCCCeEEEEeccCC
Q 045898 27 DSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..|.+++|+|++++|++++.|++
T Consensus 252 ~~i~~~~~s~~~~~l~~~~~dg~ 274 (342)
T 1yfq_A 252 YPVNSIEFSPRHKFLYTAGSDGI 274 (342)
T ss_dssp CCEEEEEECTTTCCEEEEETTSC
T ss_pred eeEEEEEEcCCCCEEEEecCCce
Confidence 39999999999999999998863
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.37 E-value=0.035 Score=34.46 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=27.3
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+.....+...|.+++|+|++++|++++.|++
T Consensus 208 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 208 HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 334455678899999999999999999998874
No 109
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.33 E-value=0.016 Score=36.60 Aligned_cols=25 Identities=16% Similarity=0.243 Sum_probs=20.9
Q ss_pred CCCCCeEEEEEcCCCCeE-EEEeccC
Q 045898 24 PPSDSVSSLCFSPKANIL-VATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~L-a~sSWD~ 48 (49)
++.+.|.+|+|+|++++| ++++.|+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg 125 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDK 125 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGT
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCC
Confidence 345689999999999986 8888886
No 110
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.16 E-value=0.027 Score=39.54 Aligned_cols=30 Identities=13% Similarity=0.103 Sum_probs=25.7
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.....+.+.|.+++|||++++|++++.|++
T Consensus 1121 ~~l~~h~~~v~~~~~s~dg~~lat~~~dg~ 1150 (1249)
T 3sfz_A 1121 HELKGHNGCVRCSAFSLDGILLATGDDNGE 1150 (1249)
T ss_dssp BCCCCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred eeeccCCCcEEEEEECCCCCEEEEEeCCCE
Confidence 334567899999999999999999999874
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.01 E-value=0.054 Score=33.81 Aligned_cols=32 Identities=25% Similarity=0.182 Sum_probs=26.1
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+|+|++ +|++++.|++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~ 184 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT 184 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT-EEEEEETTSC
T ss_pred cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC
Confidence 3444456789999999999988 8999999974
No 112
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.95 E-value=0.027 Score=34.09 Aligned_cols=24 Identities=21% Similarity=0.227 Sum_probs=21.9
Q ss_pred CCCeEEEEEcCCC----------CeEEEEeccCC
Q 045898 26 SDSVSSLCFSPKA----------NILVATSWDNQ 49 (49)
Q Consensus 26 ~D~IS~l~Fsp~~----------~~La~sSWD~~ 49 (49)
.+.|.+|+|+|++ ++|+++++|+.
T Consensus 354 ~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 354 EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp SCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE
T ss_pred CCceeEEEeccccccccccccccceEEEecCCCc
Confidence 8999999999998 79999999873
No 113
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.86 E-value=0.02 Score=38.07 Aligned_cols=28 Identities=21% Similarity=0.325 Sum_probs=24.2
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
....+.+.|.+|+|+|++++||+++-|+
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g 35 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSG 35 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTS
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCC
Confidence 3456889999999999999999998775
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.017 Score=36.50 Aligned_cols=28 Identities=4% Similarity=0.133 Sum_probs=24.1
Q ss_pred cCCCCCCeEEEEEcCC---CCeEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSPK---ANILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~---~~~La~sSWD~~ 49 (49)
...+.+.|.+|+|+|+ +++|++++.|++
T Consensus 191 ~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~ 221 (450)
T 2vdu_B 191 ILGHVSMLTDVHLIKDSDGHQFIITSDRDEH 221 (450)
T ss_dssp SEECSSCEEEEEEEECTTSCEEEEEEETTSC
T ss_pred eecccCceEEEEEcCCCCCCcEEEEEcCCCc
Confidence 3457789999999999 899999999874
No 115
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.66 E-value=0.074 Score=33.54 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=26.2
Q ss_pred ceEEecCCCCCCeEEEEEcCCCC-eEEEEeccC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKAN-ILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~-~La~sSWD~ 48 (49)
..+.....+.+.|.+++|+|+++ +|++++.|+
T Consensus 369 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg 401 (430)
T 2xyi_A 369 ELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN 401 (430)
T ss_dssp TEEEECCCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred ceEEEcCCCCCCceEEEECCCCCCEEEEEECCC
Confidence 34455567789999999999998 889999886
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.061 Score=36.87 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=26.4
Q ss_pred EEecCCCCCCeEEEEEcCC--CCeEEEEeccCC
Q 045898 19 IEVSQPPSDSVSSLCFSPK--ANILVATSWDNQ 49 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~--~~~La~sSWD~~ 49 (49)
+.....+.+.|.+|+|+|+ +++|++++.|++
T Consensus 46 ~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp EEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred ceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 4445678999999999998 899999999974
No 117
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.53 E-value=0.056 Score=35.97 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=26.6
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+.+.....+.+.|.+++|+|++++|++++.|+
T Consensus 88 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 119 (814)
T 3mkq_A 88 EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL 119 (814)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCC
Confidence 34444567889999999999999999999886
No 118
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.34 E-value=0.051 Score=36.49 Aligned_cols=26 Identities=15% Similarity=0.042 Sum_probs=22.1
Q ss_pred CCCCCeEEEEEcCC------CCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSPK------ANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~------~~~La~sSWD~~ 49 (49)
.+.+.|.+|+|+|. +++||++|+|++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dgt 236 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGT 236 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSC
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCe
Confidence 45688999999997 479999999974
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.86 E-value=0.03 Score=35.08 Aligned_cols=27 Identities=11% Similarity=-0.029 Sum_probs=23.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
..+...|.+|+|+|++.+|++++.|++
T Consensus 404 ~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 404 GGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp GGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred CCCCceEEEEEecCCEEEEEEcccCCC
Confidence 356788999999999999999999874
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.70 E-value=0.051 Score=34.61 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=22.1
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+.+.|.+++|||+++.|+.+++|+
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~ 200 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFES 200 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTT
T ss_pred CCCCcceeeEEcCCCCEEEEEEecC
Confidence 4568899999999999999999874
No 121
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.11 E-value=0.091 Score=29.80 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=19.8
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEe
Q 045898 23 QPPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sS 45 (49)
..+.+.|.+++|+|++++|++++
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~~ 60 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLNS 60 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEEE
T ss_pred ccCCcceEeeEECCCCCEEEEEc
Confidence 34678999999999999998876
No 122
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=92.79 E-value=0.087 Score=33.21 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=24.0
Q ss_pred cCCCCCCeEEEEEcCCCC-eEEEEeccCC
Q 045898 22 SQPPSDSVSSLCFSPKAN-ILVATSWDNQ 49 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~-~La~sSWD~~ 49 (49)
...+.+.|.+|+|+|+++ +|++++.|++
T Consensus 177 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 177 LRGHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp EECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred ecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 346788999999999987 9999998874
No 123
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.84 E-value=0.24 Score=28.05 Aligned_cols=29 Identities=21% Similarity=0.109 Sum_probs=22.5
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEecc
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD 47 (49)
+.....+...|..++|+|++++|++++.|
T Consensus 209 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 209 VERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred cEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 33344556789999999999999888765
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=91.44 E-value=0.12 Score=34.50 Aligned_cols=26 Identities=19% Similarity=0.163 Sum_probs=20.5
Q ss_pred CCCCCeEEEEEcC---CCCeEEEEeccCC
Q 045898 24 PPSDSVSSLCFSP---KANILVATSWDNQ 49 (49)
Q Consensus 24 ~p~D~IS~l~Fsp---~~~~La~sSWD~~ 49 (49)
.+...|+.++||| ++++|+++|+|++
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~T 204 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNN 204 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSE
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCc
Confidence 4555677888998 5689999999984
No 125
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.07 E-value=0.29 Score=29.33 Aligned_cols=24 Identities=13% Similarity=0.227 Sum_probs=19.8
Q ss_pred CCCCeEEEEEcCCCCeEEEEeccC
Q 045898 25 PSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+...+..|+|+|++++|++++.+.
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEETTT
T ss_pred CCCCcCeEEECCCCCEEEEEEcCC
Confidence 345688999999999999988763
No 126
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=91.05 E-value=0.35 Score=31.89 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=17.2
Q ss_pred EEEEEcCCCCeEEEEeccC
Q 045898 30 SSLCFSPKANILVATSWDN 48 (49)
Q Consensus 30 S~l~Fsp~~~~La~sSWD~ 48 (49)
.+++|||+++.|+.++.|+
T Consensus 176 ~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp EEEEECTTSSEEEEEEEEC
T ss_pred ceEEECCCCCEEEEEEECC
Confidence 7899999999999998874
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=90.89 E-value=0.4 Score=30.45 Aligned_cols=25 Identities=24% Similarity=0.201 Sum_probs=19.4
Q ss_pred CCCCCeEEEEEcCCCCeEE-EEeccC
Q 045898 24 PPSDSVSSLCFSPKANILV-ATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La-~sSWD~ 48 (49)
.+.+.|.+++|||+++.|+ +++.|+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCC
Confidence 4557899999999999887 555543
No 128
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.36 E-value=0.58 Score=29.21 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=23.9
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+|+| ++++|++++.|++
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~ 194 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DERVIITGSSDST 194 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCe
Confidence 344455678889999998 7789999998874
No 129
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=90.17 E-value=0.43 Score=31.49 Aligned_cols=20 Identities=10% Similarity=-0.044 Sum_probs=17.7
Q ss_pred CeEEEEEcCCCCeEEEEecc
Q 045898 28 SVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 28 ~IS~l~Fsp~~~~La~sSWD 47 (49)
.|.+++|||++++|+.++.|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNV 81 (723)
T ss_dssp TCSEEEECTTSSEEEEEESC
T ss_pred ccceEEECCCCCEEEEEecC
Confidence 49999999999999988765
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=90.12 E-value=0.3 Score=34.50 Aligned_cols=25 Identities=8% Similarity=0.097 Sum_probs=21.7
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEecc
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD 47 (49)
..+...|++++|||+|++||.++++
T Consensus 49 t~~~~~v~~~~~SPDG~~la~~s~~ 73 (1045)
T 1k32_A 49 VSNLGVINNARFFPDGRKIAIRVMR 73 (1045)
T ss_dssp ECSSSEEEEEEECTTSSEEEEEEEE
T ss_pred eeCCCcccCeEECCCCCEEEEEEee
Confidence 3567889999999999999988875
No 131
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=90.12 E-value=0.45 Score=30.93 Aligned_cols=26 Identities=19% Similarity=0.171 Sum_probs=21.2
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..+.+.+..++|||++++|++++-|+
T Consensus 191 ~~~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 191 DSGEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp CCSSCEEEEEEECTTSCEEEEEECSS
T ss_pred ecCCCccccceECCCCCEEEEccCCC
Confidence 45667899999999999999766554
No 132
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=89.96 E-value=0.21 Score=32.83 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=21.3
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
...+.+..++|||+++.|+..+||+
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECT
T ss_pred cCCCcccCceECCCCCEEEEEECCC
Confidence 3447889999999999999999874
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.34 E-value=0.35 Score=32.08 Aligned_cols=23 Identities=9% Similarity=0.068 Sum_probs=20.2
Q ss_pred CCCeEEEEEcCCCCeEEEEec-cC
Q 045898 26 SDSVSSLCFSPKANILVATSW-DN 48 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSW-D~ 48 (49)
...|++++|||++++|+.++. |+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~ 59 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDS 59 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSS
T ss_pred CCCCCCceEecCCCEEEEEeccCC
Confidence 467999999999999999887 65
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=88.63 E-value=0.33 Score=28.32 Aligned_cols=22 Identities=14% Similarity=-0.064 Sum_probs=15.2
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..+.+++|+|++++|+++++|+
T Consensus 280 ~~~~~~~~s~dg~~l~~~~~~~ 301 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLGGALG 301 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSS
T ss_pred CceeeEEECCCCCEEEEEcCCC
Confidence 4566777888777777766654
No 135
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=88.48 E-value=0.85 Score=27.49 Aligned_cols=22 Identities=18% Similarity=0.287 Sum_probs=18.2
Q ss_pred CCCeEEEEEcCCCCeEEEEecc
Q 045898 26 SDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSWD 47 (49)
...+..|+|+|++++|+++..+
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEECS
T ss_pred CCCcccEEECCCCCEEEEECCC
Confidence 3667899999999999887665
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=88.19 E-value=0.54 Score=31.07 Aligned_cols=25 Identities=28% Similarity=0.515 Sum_probs=20.7
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+...|.+++|||+++.|++++.|+
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~ 279 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNR 279 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCC
Confidence 3557899999999999999877664
No 137
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=88.06 E-value=0.8 Score=27.61 Aligned_cols=24 Identities=13% Similarity=0.230 Sum_probs=19.6
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEe
Q 045898 22 SQPPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sS 45 (49)
..++...+..++|+|++++|++++
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEc
Confidence 345667889999999999887776
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.98 E-value=0.55 Score=31.04 Aligned_cols=19 Identities=26% Similarity=0.296 Sum_probs=17.1
Q ss_pred eEEEEEcCCCCeEEEEecc
Q 045898 29 VSSLCFSPKANILVATSWD 47 (49)
Q Consensus 29 IS~l~Fsp~~~~La~sSWD 47 (49)
+.+++|||++++|+++++|
T Consensus 183 ~~~~~~SpDg~~la~~~~d 201 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMD 201 (706)
T ss_dssp CCSEEECTTSSEEEEEEEE
T ss_pred CceEEECCCCCEEEEEEEC
Confidence 5899999999999999865
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=87.92 E-value=0.4 Score=27.99 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=19.9
Q ss_pred CCCCeEEEEEcCCCCeEEEEecc
Q 045898 25 PSDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD 47 (49)
....+..|+|+|++++|++++.+
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~ 58 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRP 58 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETT
T ss_pred cCCCCceEEECCCCCEEEEeecC
Confidence 45678899999999999998876
No 140
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=87.83 E-value=0.62 Score=31.10 Aligned_cols=20 Identities=20% Similarity=0.167 Sum_probs=18.5
Q ss_pred eEEEEEcCCCCeEEEEeccC
Q 045898 29 VSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 29 IS~l~Fsp~~~~La~sSWD~ 48 (49)
+..++|||++++|++++.|+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~ 200 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDA 200 (543)
T ss_dssp EEEEEECTTSCEEEEEETTS
T ss_pred cceEEECCCCCEEEEECCCC
Confidence 89999999999999999875
No 141
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=87.74 E-value=0.56 Score=28.70 Aligned_cols=23 Identities=26% Similarity=0.457 Sum_probs=19.2
Q ss_pred CCCeEEEEEcCCCCeEEEEec-cC
Q 045898 26 SDSVSSLCFSPKANILVATSW-DN 48 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSW-D~ 48 (49)
.+.|.+++|+|++++|++++. |+
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d~ 423 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLDH 423 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTTT
T ss_pred CCCCceEEEcCCCCEEEEEECCCC
Confidence 568999999999999988764 54
No 142
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=87.72 E-value=0.45 Score=28.32 Aligned_cols=21 Identities=10% Similarity=0.132 Sum_probs=18.1
Q ss_pred CCeEEEEEcCCCCeEEEEecc
Q 045898 27 DSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD 47 (49)
..++.++|||+++.|+..+.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEE
T ss_pred ccCCCeEECCCCCEEEEEEec
Confidence 568899999999999988765
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.60 E-value=0.28 Score=32.52 Aligned_cols=20 Identities=10% Similarity=0.275 Sum_probs=17.9
Q ss_pred eEEEEEcCCCCeEEEEeccC
Q 045898 29 VSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 29 IS~l~Fsp~~~~La~sSWD~ 48 (49)
+..++|||+++.|++++.|+
T Consensus 211 ~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 211 HTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCSEEECTTSSCEEEEEEEC
T ss_pred ccceEECCCCCEEEEEEEcC
Confidence 58899999999999998875
No 144
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=87.57 E-value=0.35 Score=29.65 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=21.9
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+.+.|.+++|+|++++|++++.|+
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~ 191 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQAN 191 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGT
T ss_pred ccCCceeEEEEcCCCEEEEEECCCC
Confidence 5677999999999999999988775
No 145
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=87.40 E-value=0.82 Score=28.06 Aligned_cols=22 Identities=23% Similarity=0.193 Sum_probs=18.9
Q ss_pred CCCeEEEEEcCCCCeEEEEecc
Q 045898 26 SDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSWD 47 (49)
...+..++|+|++++|++++++
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCEeEECCCCCEEEEEECC
Confidence 6789999999999999887753
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=86.29 E-value=1.2 Score=31.44 Aligned_cols=25 Identities=8% Similarity=-0.024 Sum_probs=21.7
Q ss_pred CCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 24 PPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+...|..++|||++++|++++.|+
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~ 400 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRF 400 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTS
T ss_pred CCccceeeeEECCCCCEEEEECCCC
Confidence 5668899999999999999988764
No 147
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=85.85 E-value=0.48 Score=31.46 Aligned_cols=19 Identities=21% Similarity=0.516 Sum_probs=17.0
Q ss_pred EEEEEcCCCCeEEEEeccC
Q 045898 30 SSLCFSPKANILVATSWDN 48 (49)
Q Consensus 30 S~l~Fsp~~~~La~sSWD~ 48 (49)
.+++|||+|+.||.++.|.
T Consensus 172 ~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp CCEEECTTSSEEEEEEEEC
T ss_pred ccEEECCCCCEEEEEEECC
Confidence 5899999999999999873
No 148
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=85.81 E-value=1.4 Score=27.46 Aligned_cols=30 Identities=17% Similarity=0.356 Sum_probs=20.8
Q ss_pred eEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 18 SIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 18 ~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
.+.....+.+.|.+|+| ++++|++++.|++
T Consensus 328 ~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 328 CLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 34444567778888888 6677888887763
No 149
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=85.09 E-value=0.94 Score=26.92 Aligned_cols=18 Identities=17% Similarity=0.351 Sum_probs=16.1
Q ss_pred eEEEEEcCCCCeEEEEec
Q 045898 29 VSSLCFSPKANILVATSW 46 (49)
Q Consensus 29 IS~l~Fsp~~~~La~sSW 46 (49)
|..++|||+++.|+.++.
T Consensus 106 ~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp EEEEEECTTSSEEEEEEE
T ss_pred ccceeECCCCCEEEEEEc
Confidence 999999999998888764
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=85.03 E-value=1.9 Score=25.73 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=17.4
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEe
Q 045898 23 QPPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sS 45 (49)
.++...+..++|+|++++|++++
T Consensus 183 ~~~g~~p~~~~~spdg~~l~v~~ 205 (347)
T 3hfq_A 183 MEAGFGPRHLVFSPDGQYAFLAG 205 (347)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEE
T ss_pred cCCCCCCceEEECCCCCEEEEEe
Confidence 34556788999999999776643
No 151
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=84.72 E-value=2.3 Score=26.35 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=22.6
Q ss_pred ceEEecCCCCCCeEEEEEcCCCCeEEEEeccCC
Q 045898 17 KSIEVSQPPSDSVSSLCFSPKANILVATSWDNQ 49 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fsp~~~~La~sSWD~~ 49 (49)
+.+.....+.+.|.+++|+ +++|++++.|++
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 3344455778889999997 568888888864
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=84.47 E-value=1.3 Score=27.11 Aligned_cols=22 Identities=14% Similarity=0.400 Sum_probs=18.5
Q ss_pred CCCCeEEEEEcCCCCeEEEEec
Q 045898 25 PSDSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSW 46 (49)
....+..++|+|++++|+++..
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEET
T ss_pred CCCcceEEEECCCCCEEEEEcC
Confidence 4578999999999998888765
No 153
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=84.39 E-value=1.6 Score=25.65 Aligned_cols=24 Identities=13% Similarity=0.217 Sum_probs=18.8
Q ss_pred CCCCCeEEEEEcCCCCeEEEEecc
Q 045898 24 PPSDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSWD 47 (49)
++...+..++|+|++++|+++++.
T Consensus 173 ~~~~~~~~~~~spdg~~l~v~~~~ 196 (331)
T 3u4y_A 173 SGGTRPFNITFTPDGNFAFVANLI 196 (331)
T ss_dssp CSSSSEEEEEECTTSSEEEEEETT
T ss_pred cCCCCccceEECCCCCEEEEEeCC
Confidence 445778999999999977776653
No 154
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=84.38 E-value=1.1 Score=29.35 Aligned_cols=29 Identities=17% Similarity=0.417 Sum_probs=22.0
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+...+...+..++|||+++++++++.|+
T Consensus 235 ~l~~~~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp EEEEETTBCEEEEEECTTSCEEEEECTTS
T ss_pred EeCCCCCceEcceEECCCCeEEEEECCCC
Confidence 34444567899999999999777777664
No 155
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=83.05 E-value=1.3 Score=26.70 Aligned_cols=23 Identities=22% Similarity=0.302 Sum_probs=17.5
Q ss_pred CCCeEEEEEcCCCCeE-EEEeccC
Q 045898 26 SDSVSSLCFSPKANIL-VATSWDN 48 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~L-a~sSWD~ 48 (49)
...|.+++|+|++++| ++++.|+
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~ 54 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSN 54 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGT
T ss_pred CCCcceEEECCCCCEEEEECCCCC
Confidence 3568999999999877 5555664
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.05 E-value=0.87 Score=29.59 Aligned_cols=22 Identities=14% Similarity=0.057 Sum_probs=18.4
Q ss_pred CCeEEEEEcCCCCeEEEEec-cC
Q 045898 27 DSVSSLCFSPKANILVATSW-DN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSW-D~ 48 (49)
..|.+|+|||+|+.||.+|- |+
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g 44 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEG 44 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETT
T ss_pred cchheeecCCCCCeEEEEEccCC
Confidence 35999999999999998775 54
No 157
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=82.70 E-value=2.6 Score=25.35 Aligned_cols=19 Identities=21% Similarity=0.314 Sum_probs=15.8
Q ss_pred CCeEEEEEcCCCCeEEEEe
Q 045898 27 DSVSSLCFSPKANILVATS 45 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sS 45 (49)
..|.+++|+|++++|++++
T Consensus 74 ~~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp SSEEEEEECTTSSEEEEEE
T ss_pred CCccceEECCCCCEEEEEE
Confidence 4899999999999776554
No 158
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=81.77 E-value=3.1 Score=24.10 Aligned_cols=24 Identities=8% Similarity=0.205 Sum_probs=18.3
Q ss_pred cCCCCCCeEEEEEcCCCCeEEEEe
Q 045898 22 SQPPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 22 ~~~p~D~IS~l~Fsp~~~~La~sS 45 (49)
..++...+..++|+|++++|++++
T Consensus 173 ~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 173 TTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp ECSTTCCEEEEEECTTSSEEEEEE
T ss_pred ccCCCCCcceEEECCCCCEEEEEe
Confidence 334557889999999999776655
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=81.69 E-value=1.9 Score=26.93 Aligned_cols=18 Identities=11% Similarity=0.218 Sum_probs=16.6
Q ss_pred eEEEEEcCCCCeEEEEec
Q 045898 29 VSSLCFSPKANILVATSW 46 (49)
Q Consensus 29 IS~l~Fsp~~~~La~sSW 46 (49)
+..|+|+|++++|.+++|
T Consensus 307 p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp CCEEEEETTTTEEEEECS
T ss_pred eeEEEECCCCCEEEEeCC
Confidence 899999999999998876
No 160
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=81.27 E-value=1.9 Score=25.34 Aligned_cols=24 Identities=17% Similarity=0.230 Sum_probs=19.8
Q ss_pred CCCCeEEEEEcCCCCeEEEEeccC
Q 045898 25 PSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+...+..++|+|+++.|++++.|+
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~ 206 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADG 206 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTS
T ss_pred CCCccceEEECCCCCEEEEEcCCC
Confidence 455688999999999999887764
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=80.78 E-value=1.4 Score=26.50 Aligned_cols=29 Identities=14% Similarity=0.144 Sum_probs=20.8
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEecc
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSWD 47 (49)
..+...+.+.+..++|||+++.|+.++.|
T Consensus 73 ~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 73 TQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred EEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 34444555566578999999999887754
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.24 E-value=1.3 Score=26.44 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=17.5
Q ss_pred CCCeEEEEEcCCCCeEEEEecc
Q 045898 26 SDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSWD 47 (49)
...|..++|||+++.|+..+.+
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp TEEEEEEEECTTSSCEEEEEEE
T ss_pred CccccceEECCCCCEEEEEecC
Confidence 3468899999999988777654
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=79.48 E-value=2.6 Score=25.25 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=16.9
Q ss_pred CCeEEEEEcCCCCeEEEEecc
Q 045898 27 DSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD 47 (49)
..|..++|||+++.|+..+.+
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEE
T ss_pred cccccceECCCCCEEEEEecC
Confidence 468899999999988776654
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=79.27 E-value=1.4 Score=25.76 Aligned_cols=22 Identities=18% Similarity=0.135 Sum_probs=16.1
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..+..++|+|++++|++++.|+
T Consensus 295 ~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 295 HTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp SCCCEEEECSSSSCEEEESBSS
T ss_pred CCccceEECCCCCEEEEecCCC
Confidence 3467889999988777766553
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=78.99 E-value=1.3 Score=30.07 Aligned_cols=19 Identities=26% Similarity=0.583 Sum_probs=16.3
Q ss_pred EEEEEcCCCCeEEEEeccC
Q 045898 30 SSLCFSPKANILVATSWDN 48 (49)
Q Consensus 30 S~l~Fsp~~~~La~sSWD~ 48 (49)
..+.|||+|+.||..+.|.
T Consensus 174 ~~~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFND 192 (740)
T ss_dssp BCEEECTTSSEEEEEEEEC
T ss_pred cceEECCCCCEEEEEEEcc
Confidence 3599999999999988775
No 166
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=78.97 E-value=4.6 Score=23.59 Aligned_cols=25 Identities=20% Similarity=0.038 Sum_probs=18.5
Q ss_pred ecCCCCCCeEEEEEcCCCCeEEEEec
Q 045898 21 VSQPPSDSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 21 l~~~p~D~IS~l~Fsp~~~~La~sSW 46 (49)
....+...+ .++|+|++++|++++.
T Consensus 35 ~~~~~~~~~-~~~~s~dg~~l~~~~~ 59 (331)
T 3u4y_A 35 QITLGYDFV-DTAITSDCSNVVVTSD 59 (331)
T ss_dssp EEECCCCEE-EEEECSSSCEEEEEES
T ss_pred eEEccCCcc-eEEEcCCCCEEEEEeC
Confidence 333456667 9999999997777665
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=78.92 E-value=1.3 Score=29.37 Aligned_cols=19 Identities=21% Similarity=0.211 Sum_probs=16.7
Q ss_pred CeEEEEEcCCCCeEEEEec
Q 045898 28 SVSSLCFSPKANILVATSW 46 (49)
Q Consensus 28 ~IS~l~Fsp~~~~La~sSW 46 (49)
.|.+++|||++++||.++.
T Consensus 61 ~~~~~~~SpDg~~la~~~~ 79 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESD 79 (719)
T ss_dssp TCSEEEECTTSSEEEEEEE
T ss_pred ceeeEEECCCCCeEEEEec
Confidence 4899999999999988775
No 168
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=77.90 E-value=3.5 Score=24.13 Aligned_cols=23 Identities=4% Similarity=-0.034 Sum_probs=18.9
Q ss_pred CCCCeEEEEEcCCCCeEEEEecc
Q 045898 25 PSDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD 47 (49)
|...+..++|+|+++.|.+++.+
T Consensus 229 ~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 229 KEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp SCCCEEEEEEETTTTEEEEEESS
T ss_pred CCcccceEEECCCCCEEEEEeCC
Confidence 55678899999999988887765
No 169
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=77.19 E-value=3.9 Score=27.48 Aligned_cols=22 Identities=9% Similarity=-0.017 Sum_probs=19.6
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..+..+.|||++++|+.+++++
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEET
T ss_pred EEEEEEEECCCCCEEEEEEeCC
Confidence 4788999999999999998875
No 170
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=75.66 E-value=2.8 Score=27.90 Aligned_cols=23 Identities=9% Similarity=0.238 Sum_probs=20.5
Q ss_pred CCCCCeEEEEEcCCCCeEEEEec
Q 045898 24 PPSDSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSW 46 (49)
.+...|-.++|+|+++.|.++.|
T Consensus 476 ~~~~~~~~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 476 EGAKRVVQPEYNKRGDEVWFSVW 498 (543)
T ss_dssp SSCCEEEEEEECSSSSEEEEEEE
T ss_pred CCCCceEeccCCCCCCEEEEEee
Confidence 34678999999999999999999
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=73.21 E-value=4.2 Score=23.80 Aligned_cols=28 Identities=29% Similarity=0.485 Sum_probs=19.4
Q ss_pred EEecCCCCCCeEEEEE-cCCCCeEEEEecc
Q 045898 19 IEVSQPPSDSVSSLCF-SPKANILVATSWD 47 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~F-sp~~~~La~sSWD 47 (49)
++....|.. +++++| +|+++.|.+++-+
T Consensus 249 ~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 249 LGRVLTPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp EEEEECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred EEEEECCCC-ceeEEEECCCCCEEEEEcCC
Confidence 333344555 899999 5888888887754
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=73.00 E-value=5.3 Score=27.07 Aligned_cols=22 Identities=14% Similarity=0.125 Sum_probs=18.0
Q ss_pred CCCCCeEEEEEcCCCCeEEEEe
Q 045898 24 PPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sS 45 (49)
...+.+...+|||+|+.||..+
T Consensus 109 ~~~~~~~~~~~SPdG~~la~~~ 130 (740)
T 4a5s_A 109 RIPNNTQWVTWSPVGHKLAYVW 130 (740)
T ss_dssp CCCTTEEEEEECSSTTCEEEEE
T ss_pred cCCCcceeeEECCCCCEEEEEE
Confidence 3456799999999999998763
No 173
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=72.63 E-value=6.9 Score=26.54 Aligned_cols=21 Identities=19% Similarity=0.109 Sum_probs=18.6
Q ss_pred CeEEEEEcCCCCeEEEEeccC
Q 045898 28 SVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 28 ~IS~l~Fsp~~~~La~sSWD~ 48 (49)
.+..+.|||++++|+..++++
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECT
T ss_pred EEEEEEECCCCCEEEEEEEcc
Confidence 589999999999999988764
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=72.34 E-value=8.6 Score=22.62 Aligned_cols=23 Identities=4% Similarity=0.040 Sum_probs=18.4
Q ss_pred CCCCCeEEEEEcCCCCeEEEEec
Q 045898 24 PPSDSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sSW 46 (49)
.+...|.+|+|+|++++++++.-
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECT
T ss_pred CCCCCcceEEECCCCcEEEEeCC
Confidence 45678999999999997777543
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=71.29 E-value=3.3 Score=27.83 Aligned_cols=19 Identities=11% Similarity=0.123 Sum_probs=16.4
Q ss_pred CeEEEEEcCCCCeEEEEec
Q 045898 28 SVSSLCFSPKANILVATSW 46 (49)
Q Consensus 28 ~IS~l~Fsp~~~~La~sSW 46 (49)
.+..++|||++++||.++-
T Consensus 126 ~~~~~~~SPDg~~la~~~~ 144 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLS 144 (710)
T ss_dssp EEEEEEECTTSSEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEc
Confidence 5899999999999987654
No 176
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=71.15 E-value=4.8 Score=23.96 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=20.4
Q ss_pred ceEEecCCCCCCeEEEEEc-CCCCeEEEEe
Q 045898 17 KSIEVSQPPSDSVSSLCFS-PKANILVATS 45 (49)
Q Consensus 17 ~~~~l~~~p~D~IS~l~Fs-p~~~~La~sS 45 (49)
+.+.....|...+++++|+ |+++.|.+++
T Consensus 231 ~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 231 KRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred eEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 3344445567889999999 8888765544
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=71.01 E-value=3.5 Score=27.75 Aligned_cols=19 Identities=11% Similarity=0.006 Sum_probs=15.9
Q ss_pred CCeEEEEEcCCCCeEEEEe
Q 045898 27 DSVSSLCFSPKANILVATS 45 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sS 45 (49)
..+..++|||++++||.++
T Consensus 121 ~~~~~~~~SPDG~~la~~~ 139 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQ 139 (695)
T ss_dssp EEEEEEEECTTSSEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEE
Confidence 4699999999999988543
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=70.67 E-value=4.8 Score=27.41 Aligned_cols=22 Identities=18% Similarity=0.117 Sum_probs=19.0
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..+..++|||++++|.+++.|+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg 218 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDG 218 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTS
T ss_pred CCccceEECCCCCEEEEEcCCC
Confidence 4677999999999999988875
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=70.24 E-value=6 Score=23.88 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=18.6
Q ss_pred CCCeEEEEEcCCCCeEEEEecc
Q 045898 26 SDSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSWD 47 (49)
-..|..|+|+|+++++++.+.+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~ 44 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGD 44 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCC
Confidence 3679999999999988887665
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=69.47 E-value=8.2 Score=22.51 Aligned_cols=28 Identities=11% Similarity=0.331 Sum_probs=20.6
Q ss_pred EEecCCCCCCeEEEEEcCCCCeEEEEec
Q 045898 19 IEVSQPPSDSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fsp~~~~La~sSW 46 (49)
++....+...+..|+|+|+++++++...
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~ 88 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHG 88 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETT
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecC
Confidence 3334456788999999999997776543
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=68.48 E-value=4.1 Score=26.83 Aligned_cols=21 Identities=19% Similarity=0.188 Sum_probs=16.2
Q ss_pred CCCeEEEEEcCCCCeEEEEeccC
Q 045898 26 SDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
...|++++|||.| ++++.=|+
T Consensus 162 ~~~Vs~v~WSpkG--~~vg~~dg 182 (388)
T 1xip_A 162 AQNVTSFDVTNSQ--LAVLLKDR 182 (388)
T ss_dssp EESEEEEEECSSE--EEEEETTS
T ss_pred cCCceEEEEcCCc--eEEEEcCC
Confidence 4689999999999 56665554
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=68.36 E-value=3.3 Score=27.83 Aligned_cols=20 Identities=5% Similarity=0.225 Sum_probs=17.4
Q ss_pred eEEEEEcCCCCeEEEEeccC
Q 045898 29 VSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 29 IS~l~Fsp~~~~La~sSWD~ 48 (49)
++.++|||+++.|+.++.|+
T Consensus 173 ~~~~~wspDg~~l~~~~~~~ 192 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQ 192 (710)
T ss_dssp SCCEEECTTSSEEEEEECCC
T ss_pred cceEEEEeCCCEEEEEEECC
Confidence 67899999999999888764
No 183
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=66.86 E-value=9.9 Score=23.15 Aligned_cols=22 Identities=9% Similarity=0.163 Sum_probs=18.4
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+++..|+|+|+++.|.++++++
T Consensus 195 ~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 195 LGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp CCEEEEEECTTSCEEEEEESSC
T ss_pred cccceeEeccCCCEEEEEeCCC
Confidence 4678899999999898887764
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=66.29 E-value=5.1 Score=27.18 Aligned_cols=21 Identities=14% Similarity=0.192 Sum_probs=17.3
Q ss_pred CCeEEEEEcCCCCeEEEEecc
Q 045898 27 DSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD 47 (49)
..+..++|||++++||.++-+
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~ 183 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQD 183 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEE
T ss_pred EEEEeEEECCCCCEEEEEEcC
Confidence 368999999999999887643
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=66.11 E-value=11 Score=22.23 Aligned_cols=26 Identities=8% Similarity=0.266 Sum_probs=19.5
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEeccC
Q 045898 23 QPPSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
......+.+++|+|++++++++..++
T Consensus 41 ~~~~~~~~~~~~~~~g~l~~~~~~~~ 66 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQLFLLDVFEG 66 (333)
T ss_dssp ESSCCCEEEEEECTTSCEEEEETTTC
T ss_pred eccCccccCcEECCCCCEEEEECCCC
Confidence 34556789999999999777766553
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=66.05 E-value=8.9 Score=22.16 Aligned_cols=24 Identities=25% Similarity=0.444 Sum_probs=18.4
Q ss_pred CCCCCCeEEEEEcCCCCeEEEEec
Q 045898 23 QPPSDSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 23 ~~p~D~IS~l~Fsp~~~~La~sSW 46 (49)
..|...+.+|+|+|+++.|.+++.
T Consensus 264 ~~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 264 RCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEET
T ss_pred eCCCCCceeEEECCCCCEEEEEeC
Confidence 345678999999999996666554
No 187
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=65.91 E-value=12 Score=22.64 Aligned_cols=28 Identities=29% Similarity=0.355 Sum_probs=19.8
Q ss_pred EEecCCCCCCeEEEEEc-CCCCeEEEEec
Q 045898 19 IEVSQPPSDSVSSLCFS-PKANILVATSW 46 (49)
Q Consensus 19 ~~l~~~p~D~IS~l~Fs-p~~~~La~sSW 46 (49)
++....|...|.+++|+ |+++.|.+++-
T Consensus 263 ~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 263 IARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 33344566789999998 88887766543
No 188
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=61.54 E-value=7.3 Score=26.37 Aligned_cols=21 Identities=24% Similarity=0.358 Sum_probs=16.7
Q ss_pred CCCCeEEEEEcCCCCeEEEEe
Q 045898 25 PSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sS 45 (49)
....|..++|||++++||.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~ 147 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSL 147 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEE
T ss_pred CcEEEEEEEECCCCCEEEEEE
Confidence 345799999999999888643
No 189
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=59.46 E-value=11 Score=22.37 Aligned_cols=20 Identities=20% Similarity=0.155 Sum_probs=16.0
Q ss_pred CeEEEEEcCCCCeEEEEecc
Q 045898 28 SVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 28 ~IS~l~Fsp~~~~La~sSWD 47 (49)
.++.++|+|+++.|.+++-+
T Consensus 278 ~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 278 TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp CCCEEEECTTSCEEEEEETT
T ss_pred ceeEEEEeCCCCEEEEEcCC
Confidence 68999999988878776644
No 190
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=58.06 E-value=14 Score=21.23 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=17.2
Q ss_pred CCeEEEEEcCCCCeEEEEecc
Q 045898 27 DSVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD 47 (49)
..+..|+|+|+++++++.+.+
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSS
T ss_pred CCCcEEEECCCCCEEEEeCCC
Confidence 678999999999887776554
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=56.60 E-value=8.6 Score=24.36 Aligned_cols=20 Identities=20% Similarity=0.164 Sum_probs=16.8
Q ss_pred CeEEEEEcCCCC-eEEEEecc
Q 045898 28 SVSSLCFSPKAN-ILVATSWD 47 (49)
Q Consensus 28 ~IS~l~Fsp~~~-~La~sSWD 47 (49)
....|.|+|+++ +|.++.|.
T Consensus 319 ~p~~i~~s~Dg~~~l~v~~~~ 339 (373)
T 2mad_H 319 DVDAISVAQDGGPDLYALSAG 339 (373)
T ss_pred CcCeEEECCCCCeEEEEEcCC
Confidence 578899999998 88888873
No 192
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=55.59 E-value=7.9 Score=26.63 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=19.4
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..++.|.+||++++|-++.|..
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTT
T ss_pred CceeEEEECCCCCEEEEEeCCC
Confidence 4588999999999999999964
No 193
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=49.75 E-value=12 Score=27.87 Aligned_cols=23 Identities=22% Similarity=0.405 Sum_probs=18.9
Q ss_pred CCCeEEEEEcCC------CCeEEEEec-cC
Q 045898 26 SDSVSSLCFSPK------ANILVATSW-DN 48 (49)
Q Consensus 26 ~D~IS~l~Fsp~------~~~La~sSW-D~ 48 (49)
.+.|+++.+.|. ++++|++.| |+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~ 582 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDI 582 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTT
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCC
Confidence 357999999874 479999999 75
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=49.11 E-value=34 Score=19.20 Aligned_cols=22 Identities=9% Similarity=0.209 Sum_probs=16.7
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
..+.+|+|+|+++++++.+.++
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGT
T ss_pred CCceeEEECCCCCEEEEECCCC
Confidence 6789999999998666655443
No 195
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=45.27 E-value=27 Score=24.06 Aligned_cols=22 Identities=14% Similarity=-0.052 Sum_probs=18.3
Q ss_pred CCeEEEEEcCCCCeEEEEeccC
Q 045898 27 DSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
+-...+.|||+++.|+..+|++
T Consensus 271 ~~~~~~~~SpDg~~l~~~~~~~ 292 (751)
T 2xe4_A 271 LFSAFMYKAADTNTLCIGSQSP 292 (751)
T ss_dssp TCEEEEEECTTSSEEEEEEECS
T ss_pred ceEEEEEECCCCCEEEEEecCC
Confidence 4567899999999999888764
No 196
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=43.00 E-value=16 Score=23.51 Aligned_cols=20 Identities=10% Similarity=0.036 Sum_probs=16.3
Q ss_pred CeEEEEEcCCCCeEEEEecc
Q 045898 28 SVSSLCFSPKANILVATSWD 47 (49)
Q Consensus 28 ~IS~l~Fsp~~~~La~sSWD 47 (49)
....|+|||++++|.++.++
T Consensus 125 ~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp CTTSEEECTTSSCEEEEECS
T ss_pred CcceEEEcCCCCEEEEEccC
Confidence 34569999999999988764
No 197
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=42.54 E-value=16 Score=23.97 Aligned_cols=24 Identities=29% Similarity=0.335 Sum_probs=20.6
Q ss_pred CCCCeEEEEEcCCCCeEEEEeccC
Q 045898 25 PSDSVSSLCFSPKANILVATSWDN 48 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sSWD~ 48 (49)
|...++.|++++...+|++++.|+
T Consensus 36 ~~~~~nlLais~~~gll~a~~~~~ 59 (388)
T 1xip_A 36 PFASLQNLDISNSKSLFVAASGSK 59 (388)
T ss_dssp CSSCCBCEEEETTTTEEEEEETTE
T ss_pred CcccccEEEEcCCCCEEEEeCCCE
Confidence 455899999999999999998764
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=39.68 E-value=45 Score=20.07 Aligned_cols=19 Identities=16% Similarity=0.053 Sum_probs=15.3
Q ss_pred CCCeEEEEEcCCCCeEEEE
Q 045898 26 SDSVSSLCFSPKANILVAT 44 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~s 44 (49)
......|+|+|++++|.++
T Consensus 224 g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp TCCCEEEEECTTSCEEEEE
T ss_pred CCCceeEEEecCCCEEEEE
Confidence 4578999999999877654
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=38.50 E-value=50 Score=18.52 Aligned_cols=21 Identities=10% Similarity=0.188 Sum_probs=17.2
Q ss_pred CCCCeEEEEEcCCCCeEEEEe
Q 045898 25 PSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sS 45 (49)
+...+.+|++.|+++++++..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~ 33 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQH 33 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEET
T ss_pred cCCCccceEECCCCCEEEEec
Confidence 457899999999999777654
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=34.71 E-value=35 Score=22.59 Aligned_cols=20 Identities=30% Similarity=0.308 Sum_probs=16.9
Q ss_pred CeEEEEEcCCCC-eEEEEecc
Q 045898 28 SVSSLCFSPKAN-ILVATSWD 47 (49)
Q Consensus 28 ~IS~l~Fsp~~~-~La~sSWD 47 (49)
....|.|+|+++ +|.++.|.
T Consensus 371 ~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp EECEEEECCSSSCEEEEEETT
T ss_pred CcCeEEEccCCCEEEEEEcCC
Confidence 467899999998 89998884
No 201
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=30.83 E-value=67 Score=19.92 Aligned_cols=21 Identities=10% Similarity=0.267 Sum_probs=15.9
Q ss_pred CCCCeEEEEEcCCCCeEEEEe
Q 045898 25 PSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 25 p~D~IS~l~Fsp~~~~La~sS 45 (49)
+.+....|+|+|+++.|.++.
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEEC
Confidence 347889999999997665543
No 202
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=29.17 E-value=72 Score=20.07 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=16.8
Q ss_pred CCCCCeEEEEEcCCCCeEEEEe
Q 045898 24 PPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sS 45 (49)
++.|.-..|+|.|+.+.|.+++
T Consensus 222 ~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 222 SPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp SSCCCEEEEEEETTTTEEEEEE
T ss_pred CcCCceEEEEEcCCCCEEEEEC
Confidence 3457889999999987776654
No 203
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=28.49 E-value=96 Score=18.79 Aligned_cols=25 Identities=16% Similarity=0.215 Sum_probs=18.6
Q ss_pred EecCCCCCCeEEEEEcCCCCeEEEE
Q 045898 20 EVSQPPSDSVSSLCFSPKANILVAT 44 (49)
Q Consensus 20 ~l~~~p~D~IS~l~Fsp~~~~La~s 44 (49)
.+..+....|.+|.|.|++++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 156 ALVQEAIGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp EEECSCCCCEEEEEECTTSCEEEEE
T ss_pred EeecCCCcceEEEEEcCCCcEEEEE
Confidence 3344455678999999998888776
No 204
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=27.47 E-value=1.1e+02 Score=18.75 Aligned_cols=21 Identities=33% Similarity=0.474 Sum_probs=16.2
Q ss_pred CCCeEEEEEcCCCCeEEEEec
Q 045898 26 SDSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 26 ~D~IS~l~Fsp~~~~La~sSW 46 (49)
.+-+|.|+|.|+++.|.+.++
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d 46 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTIN 46 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEE
T ss_pred ccCcceeEEeCCCCEEEEEEC
Confidence 356999999999877766454
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=24.95 E-value=67 Score=21.05 Aligned_cols=20 Identities=25% Similarity=0.268 Sum_probs=16.2
Q ss_pred CeEEEEEcCCCC-eEEEEecc
Q 045898 28 SVSSLCFSPKAN-ILVATSWD 47 (49)
Q Consensus 28 ~IS~l~Fsp~~~-~La~sSWD 47 (49)
.+-.|+|+|+++ +|.++.|.
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~ 352 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTG 352 (386)
T ss_dssp EECEEEECSSSSCEEEEEETT
T ss_pred CcceEEECCCCCeEEEEEcCC
Confidence 566899999996 78888873
No 206
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=24.23 E-value=1.2e+02 Score=17.91 Aligned_cols=23 Identities=4% Similarity=0.063 Sum_probs=17.9
Q ss_pred CCCCeEEEEEc---CCCCeEEEEecc
Q 045898 25 PSDSVSSLCFS---PKANILVATSWD 47 (49)
Q Consensus 25 p~D~IS~l~Fs---p~~~~La~sSWD 47 (49)
|-...++++|. |+++.|.+++..
T Consensus 253 ~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 253 GVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp TCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ccCCceEEEEecccCCCCEEEEECCC
Confidence 45678999999 888888776654
No 207
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=23.52 E-value=1.2e+02 Score=17.91 Aligned_cols=20 Identities=25% Similarity=0.165 Sum_probs=16.3
Q ss_pred CCeEEEEEcCCCCeEEEEec
Q 045898 27 DSVSSLCFSPKANILVATSW 46 (49)
Q Consensus 27 D~IS~l~Fsp~~~~La~sSW 46 (49)
..|.++.+.|++++|++.+-
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCG 96 (276)
T ss_dssp CEEEEEEECTTSCEEEEEES
T ss_pred ccccccEECCCCCEEEEecC
Confidence 57888999999998887654
No 208
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=23.16 E-value=63 Score=20.88 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=12.0
Q ss_pred eEEEEEcCCCCeEEEE
Q 045898 29 VSSLCFSPKANILVAT 44 (49)
Q Consensus 29 IS~l~Fsp~~~~La~s 44 (49)
-..|+|||+++.|.++
T Consensus 223 pNGia~spDg~~lYva 238 (355)
T 3sre_A 223 ANGINISPDGKYVYIA 238 (355)
T ss_dssp EEEEEECTTSSEEEEE
T ss_pred cCcceECCCCCEEEEE
Confidence 3569999999877554
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.87 E-value=62 Score=20.50 Aligned_cols=17 Identities=6% Similarity=0.325 Sum_probs=12.6
Q ss_pred EEEcCCCCeEEEEeccC
Q 045898 32 LCFSPKANILVATSWDN 48 (49)
Q Consensus 32 l~Fsp~~~~La~sSWD~ 48 (49)
|+|+|+++.|.++.+++
T Consensus 176 ia~~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEG 192 (409)
T ss_dssp CEECTTSSEEEEEBSST
T ss_pred eeEecCCCcEEEEecCC
Confidence 77888887777777654
No 210
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.55 E-value=1.3e+02 Score=18.53 Aligned_cols=22 Identities=18% Similarity=0.404 Sum_probs=16.7
Q ss_pred CCCCCeEEEEEcCCCCeEEEEe
Q 045898 24 PPSDSVSSLCFSPKANILVATS 45 (49)
Q Consensus 24 ~p~D~IS~l~Fsp~~~~La~sS 45 (49)
+..|.-..|+|.|.++.|.++.
T Consensus 201 ~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 201 STNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTSSCEEEEEEETTTTEEEEEE
T ss_pred CcCCceEEEEEcCCCCEEEEEC
Confidence 4457889999999987666553
No 211
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=20.53 E-value=56 Score=23.09 Aligned_cols=19 Identities=11% Similarity=0.118 Sum_probs=15.2
Q ss_pred CeEEEEEcCCCCeEEEEec
Q 045898 28 SVSSLCFSPKANILVATSW 46 (49)
Q Consensus 28 ~IS~l~Fsp~~~~La~sSW 46 (49)
....+.|||+++++.++..
T Consensus 278 ~PhGv~~sPDGk~v~V~~~ 296 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGK 296 (595)
T ss_dssp SCCCEEECTTSSEEEEECT
T ss_pred CceEEEEcCCCCEEEEeCC
Confidence 3456999999999988764
No 212
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=20.19 E-value=1.1e+02 Score=16.28 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=17.0
Q ss_pred CCCCC-eEEEEEcCCCCeEEEEec
Q 045898 24 PPSDS-VSSLCFSPKANILVATSW 46 (49)
Q Consensus 24 ~p~D~-IS~l~Fsp~~~~La~sSW 46 (49)
...|+ |.+|.|.=++..|....|
T Consensus 26 ~D~dg~V~kVef~vdg~~vg~dt~ 49 (98)
T 3pe9_A 26 SDSDGKISRVDFLVDGEVIGSDRE 49 (98)
T ss_dssp CCSSSCEEEEEEEETTEEEEEECS
T ss_pred EeCCCCEEEEEEEECCEEeccccc
Confidence 34455 999999999877766544
Done!