Query 045901
Match_columns 171
No_of_seqs 115 out of 1097
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 06:40:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045901.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045901hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3104 PTR2 Dipeptide/tripept 99.9 4.2E-25 9E-30 187.4 7.7 145 1-171 35-183 (498)
2 KOG1237 H+/oligopeptide sympor 99.9 2.6E-23 5.6E-28 181.8 13.3 170 1-171 51-222 (571)
3 TIGR00926 2A1704 Peptide:H+ sy 99.9 2.1E-22 4.6E-27 178.6 16.4 151 1-170 1-151 (654)
4 PRK10207 dipeptide/tripeptide 99.9 7.8E-22 1.7E-26 170.2 13.7 144 1-171 28-171 (489)
5 TIGR00924 yjdL_sub1_fam amino 99.9 7.7E-21 1.7E-25 163.3 13.0 144 1-171 24-169 (475)
6 PRK15462 dipeptide/tripeptide 99.8 4.2E-20 9.1E-25 159.4 13.7 144 1-171 23-166 (493)
7 PRK09584 tppB putative tripept 99.8 1.9E-18 4.1E-23 149.5 13.9 143 2-171 36-178 (500)
8 PF07690 MFS_1: Major Facilita 99.6 1.3E-14 2.7E-19 117.5 11.3 133 7-170 16-148 (352)
9 PRK12382 putative transporter; 99.6 1.5E-14 3.3E-19 120.3 11.9 143 6-171 34-176 (392)
10 PRK10054 putative transporter; 99.6 2.8E-14 6.1E-19 119.7 13.1 135 3-168 23-157 (395)
11 PRK11646 multidrug resistance 99.6 3.6E-14 7.9E-19 119.2 12.5 135 2-167 25-159 (400)
12 KOG1330 Sugar transporter/spin 99.6 2.3E-15 4.9E-20 127.3 4.7 122 16-168 61-182 (493)
13 PF00854 PTR2: POT family; In 99.6 9.5E-15 2.1E-19 121.7 8.3 100 54-171 1-100 (372)
14 PRK05122 major facilitator sup 99.6 3.6E-14 7.8E-19 118.1 11.7 142 6-170 34-175 (399)
15 TIGR00891 2A0112 putative sial 99.6 1.3E-13 2.9E-18 113.6 14.4 131 8-169 32-162 (405)
16 TIGR00893 2A0114 d-galactonate 99.5 6.8E-14 1.5E-18 113.9 11.9 133 7-170 13-145 (399)
17 PRK10213 nepI ribonucleoside t 99.5 1.4E-13 2.9E-18 115.5 13.6 133 7-171 40-172 (394)
18 PRK12307 putative sialic acid 99.5 2E-13 4.3E-18 114.5 14.2 132 8-170 38-169 (426)
19 PRK03545 putative arabinose tr 99.5 1.3E-13 2.9E-18 114.8 12.5 128 12-170 33-160 (390)
20 PRK14995 methyl viologen resis 99.5 1.7E-13 3.7E-18 118.1 13.5 131 11-171 29-159 (495)
21 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.7E-13 3.7E-18 115.6 13.2 129 8-167 28-156 (412)
22 TIGR00711 efflux_EmrB drug res 99.5 1.5E-13 3.2E-18 116.8 11.9 134 7-171 21-154 (485)
23 TIGR00900 2A0121 H+ Antiporter 99.5 2.6E-13 5.7E-18 110.1 12.8 137 7-170 19-155 (365)
24 cd06174 MFS The Major Facilita 99.5 4.8E-13 1.1E-17 107.5 13.9 133 5-169 17-149 (352)
25 PRK03633 putative MFS family t 99.5 2.4E-13 5.3E-18 112.9 12.5 132 5-168 24-155 (381)
26 PRK09705 cynX putative cyanate 99.5 3.9E-13 8.4E-18 112.5 13.5 127 11-169 32-158 (393)
27 TIGR00710 efflux_Bcr_CflA drug 99.5 3.7E-13 8E-18 110.6 12.7 128 12-170 29-156 (385)
28 TIGR00881 2A0104 phosphoglycer 99.5 1.6E-13 3.4E-18 111.7 10.2 129 9-168 16-145 (379)
29 TIGR00885 fucP L-fucose:H+ sym 99.5 8.2E-13 1.8E-17 111.7 14.4 135 5-167 20-154 (410)
30 TIGR00895 2A0115 benzoate tran 99.5 5E-13 1.1E-17 109.6 12.3 132 8-170 37-168 (398)
31 TIGR00890 2A0111 Oxalate/Forma 99.5 6.9E-13 1.5E-17 107.9 13.0 129 7-167 22-150 (377)
32 PRK11551 putative 3-hydroxyphe 99.5 9E-13 2E-17 109.8 14.0 129 10-169 37-165 (406)
33 TIGR01299 synapt_SV2 synaptic 99.5 7.1E-13 1.5E-17 119.5 13.8 129 7-166 186-314 (742)
34 TIGR00903 2A0129 major facilit 99.5 9.7E-13 2.1E-17 109.9 13.6 133 7-171 10-142 (368)
35 PRK11663 regulatory protein Uh 99.5 1.2E-12 2.6E-17 110.9 14.3 129 12-171 47-175 (434)
36 PRK03893 putative sialic acid 99.5 1E-12 2.3E-17 112.2 13.8 132 8-170 40-171 (496)
37 TIGR00886 2A0108 nitrite extru 99.5 9.5E-13 2.1E-17 107.8 12.9 132 5-167 19-150 (366)
38 PRK11102 bicyclomycin/multidru 99.5 8.3E-13 1.8E-17 108.8 12.6 132 7-170 11-142 (377)
39 PRK10504 putative transporter; 99.5 6.4E-13 1.4E-17 113.1 12.2 135 4-170 27-161 (471)
40 PRK11043 putative transporter; 99.5 1.1E-12 2.3E-17 109.5 13.1 127 14-171 32-158 (401)
41 PRK10091 MFS transport protein 99.5 8.5E-13 1.8E-17 109.8 12.3 128 12-170 27-154 (382)
42 PRK15403 multidrug efflux syst 99.4 1.6E-12 3.5E-17 109.7 13.1 126 14-170 42-167 (413)
43 PRK11195 lysophospholipid tran 99.4 1.5E-12 3.2E-17 109.2 12.5 122 13-168 28-149 (393)
44 TIGR00899 2A0120 sugar efflux 99.4 1.7E-12 3.7E-17 106.4 12.6 138 4-170 14-152 (375)
45 PRK10473 multidrug efflux syst 99.4 2.6E-12 5.7E-17 106.8 13.5 128 12-170 27-154 (392)
46 TIGR00896 CynX cyanate transpo 99.4 3.7E-12 7.9E-17 104.6 13.1 129 7-168 19-147 (355)
47 PRK10406 alpha-ketoglutarate t 99.4 5.2E-12 1.1E-16 106.9 14.0 138 6-166 40-183 (432)
48 PRK10133 L-fucose transporter; 99.4 5.9E-12 1.3E-16 107.3 14.4 130 9-166 47-176 (438)
49 PRK03699 putative transporter; 99.4 8.5E-12 1.8E-16 104.2 14.8 126 11-167 30-155 (394)
50 PRK11652 emrD multidrug resist 99.4 5.1E-12 1.1E-16 105.1 13.1 128 12-170 32-159 (394)
51 TIGR00879 SP MFS transporter, 99.4 4.5E-12 9.7E-17 106.0 12.3 116 20-163 68-183 (481)
52 PRK10077 xylE D-xylose transpo 99.4 8.5E-12 1.8E-16 106.1 14.2 129 18-166 50-179 (479)
53 TIGR00897 2A0118 polyol permea 99.4 7.8E-12 1.7E-16 104.8 13.6 139 4-170 30-169 (402)
54 PRK15402 multidrug efflux syst 99.4 8E-12 1.7E-16 104.4 13.6 126 14-170 39-164 (406)
55 PRK09556 uhpT sugar phosphate 99.4 1.9E-12 4.1E-17 110.7 9.0 131 11-167 52-182 (467)
56 PRK09874 drug efflux system pr 99.4 1.2E-11 2.7E-16 102.7 12.9 133 4-169 31-168 (408)
57 TIGR00806 rfc RFC reduced fola 99.4 1.3E-11 2.9E-16 105.9 13.1 129 6-166 44-173 (511)
58 TIGR00898 2A0119 cation transp 99.4 7.2E-12 1.6E-16 107.5 11.4 124 13-167 114-240 (505)
59 TIGR00894 2A0114euk Na(+)-depe 99.3 1.4E-11 3E-16 104.9 12.4 124 17-169 70-193 (465)
60 TIGR00891 2A0112 putative sial 99.3 3.4E-11 7.4E-16 99.3 13.8 136 6-171 257-392 (405)
61 TIGR00890 2A0111 Oxalate/Forma 99.3 4.1E-11 8.8E-16 97.5 13.2 134 8-171 226-359 (377)
62 PRK10642 proline/glycine betai 99.3 3.4E-11 7.3E-16 103.7 13.2 138 5-165 33-176 (490)
63 PRK03699 putative transporter; 99.3 3.3E-11 7.1E-16 100.7 12.6 137 3-171 221-357 (394)
64 cd06174 MFS The Major Facilita 99.3 6.7E-11 1.5E-15 95.0 13.7 136 4-170 192-328 (352)
65 TIGR00900 2A0121 H+ Antiporter 99.3 4E-11 8.8E-16 97.2 12.2 134 8-171 232-365 (365)
66 TIGR00887 2A0109 phosphate:H+ 99.3 6.5E-11 1.4E-15 102.1 14.0 123 19-166 52-174 (502)
67 PLN00028 nitrate transmembrane 99.3 8.6E-11 1.9E-15 101.0 14.3 124 11-166 59-182 (476)
68 PRK15011 sugar efflux transpor 99.3 8.3E-11 1.8E-15 98.3 13.7 132 7-170 236-367 (393)
69 PRK15075 citrate-proton sympor 99.3 7.6E-11 1.7E-15 99.8 13.5 137 7-166 34-176 (434)
70 PRK03893 putative sialic acid 99.3 6.7E-11 1.4E-15 101.1 12.9 137 6-171 294-430 (496)
71 KOG3764 Vesicular amine transp 99.3 1E-11 2.2E-16 103.9 7.4 125 17-171 100-224 (464)
72 PRK10642 proline/glycine betai 99.3 9.1E-11 2E-15 101.0 13.4 139 2-168 265-403 (490)
73 TIGR00899 2A0120 sugar efflux 99.3 1.2E-10 2.6E-15 95.4 13.3 133 7-171 219-351 (375)
74 TIGR00712 glpT glycerol-3-phos 99.3 8.2E-11 1.8E-15 99.8 12.5 128 10-165 49-176 (438)
75 TIGR00805 oat sodium-independe 99.3 1E-11 2.2E-16 110.6 7.2 155 6-168 51-233 (633)
76 TIGR00892 2A0113 monocarboxyla 99.3 9.4E-11 2E-15 100.2 12.8 128 12-171 43-171 (455)
77 PRK11273 glpT sn-glycerol-3-ph 99.3 1.4E-10 3E-15 98.8 13.7 125 9-161 50-175 (452)
78 PRK08633 2-acyl-glycerophospho 99.3 8.1E-11 1.8E-15 109.8 13.2 133 9-169 31-165 (1146)
79 TIGR00882 2A0105 oligosacchari 99.3 8.6E-11 1.9E-15 98.0 12.1 140 4-168 19-158 (396)
80 PRK10489 enterobactin exporter 99.2 3.8E-11 8.2E-16 100.8 9.7 132 12-169 41-172 (417)
81 PRK14995 methyl viologen resis 99.2 1E-10 2.2E-15 100.9 12.3 138 3-168 275-412 (495)
82 PRK09556 uhpT sugar phosphate 99.2 1.6E-10 3.4E-15 98.8 13.3 136 4-168 275-411 (467)
83 COG0738 FucP Fucose permease [ 99.2 1.9E-10 4.1E-15 96.3 12.9 134 7-168 32-165 (422)
84 TIGR00711 efflux_EmrB drug res 99.2 1.2E-10 2.5E-15 99.0 11.9 139 3-168 271-409 (485)
85 KOG0254 Predicted transporter 99.2 1.7E-10 3.7E-15 100.1 13.1 113 24-167 90-202 (513)
86 TIGR00883 2A0106 metabolite-pr 99.2 1.1E-10 2.4E-15 95.5 11.1 141 4-171 236-377 (394)
87 PRK09705 cynX putative cyanate 99.2 1.6E-10 3.6E-15 96.7 12.3 138 2-171 220-357 (393)
88 TIGR00896 CynX cyanate transpo 99.2 2.5E-10 5.4E-15 93.7 12.7 138 3-171 213-350 (355)
89 PRK15034 nitrate/nitrite trans 99.2 3.8E-10 8.2E-15 97.1 14.1 129 10-165 56-185 (462)
90 TIGR00883 2A0106 metabolite-pr 99.2 5.2E-10 1.1E-14 91.5 14.3 136 8-166 13-155 (394)
91 PRK11551 putative 3-hydroxyphe 99.2 2E-10 4.3E-15 95.7 12.1 134 4-169 237-370 (406)
92 PRK15011 sugar efflux transpor 99.2 3.3E-10 7E-15 94.7 13.3 136 5-171 33-171 (393)
93 COG2814 AraJ Arabinose efflux 99.2 2.7E-10 5.8E-15 95.8 12.7 129 12-171 37-165 (394)
94 PRK09952 shikimate transporter 99.2 5.1E-10 1.1E-14 95.1 13.9 131 12-166 47-184 (438)
95 PRK10489 enterobactin exporter 99.2 2.1E-10 4.6E-15 96.3 11.2 136 5-171 241-376 (417)
96 PRK09952 shikimate transporter 99.2 5.8E-10 1.3E-14 94.8 13.9 140 2-168 265-405 (438)
97 PRK09528 lacY galactoside perm 99.2 1.6E-10 3.4E-15 97.2 9.9 65 4-69 27-91 (420)
98 TIGR00880 2_A_01_02 Multidrug 99.2 8.8E-11 1.9E-15 82.4 7.0 109 31-170 6-114 (141)
99 TIGR00792 gph sugar (Glycoside 99.2 3.3E-10 7.1E-15 95.2 11.5 138 6-166 18-159 (437)
100 PRK15075 citrate-proton sympor 99.2 5.2E-10 1.1E-14 94.7 12.6 141 3-171 254-396 (434)
101 PRK03545 putative arabinose tr 99.2 1.1E-09 2.4E-14 91.2 14.3 136 4-171 222-357 (390)
102 TIGR00893 2A0114 d-galactonate 99.1 7.3E-10 1.6E-14 90.2 12.3 143 4-171 232-375 (399)
103 TIGR00792 gph sugar (Glycoside 99.1 2.3E-10 5.1E-15 96.1 9.5 137 11-171 246-382 (437)
104 TIGR00901 2A0125 AmpG-related 99.1 1E-09 2.2E-14 90.0 13.1 137 5-170 5-146 (356)
105 PRK03633 putative MFS family t 99.1 8.1E-10 1.8E-14 91.8 12.5 131 6-171 219-349 (381)
106 TIGR00895 2A0115 benzoate tran 99.1 7.1E-10 1.5E-14 90.9 11.9 130 5-166 268-397 (398)
107 KOG0255 Synaptic vesicle trans 99.1 4.6E-10 1E-14 97.1 11.3 121 16-168 111-231 (521)
108 KOG2532 Permease of the major 99.1 4.5E-10 9.8E-15 96.8 10.9 128 15-171 65-193 (466)
109 TIGR01301 GPH_sucrose GPH fami 99.1 8.2E-10 1.8E-14 95.4 12.4 147 7-166 24-175 (477)
110 PRK05122 major facilitator sup 99.1 7.3E-10 1.6E-14 92.2 11.6 134 4-171 233-366 (399)
111 TIGR00902 2A0127 phenyl propri 99.1 1.4E-09 3.1E-14 90.5 13.2 135 4-171 222-357 (382)
112 PRK12307 putative sialic acid 99.1 1.6E-09 3.5E-14 90.8 13.4 134 6-171 250-385 (426)
113 PRK12382 putative transporter; 99.1 7.5E-10 1.6E-14 92.1 11.3 134 4-171 233-366 (392)
114 PF13347 MFS_2: MFS/sugar tran 99.1 7.2E-10 1.5E-14 93.7 11.3 142 6-170 244-385 (428)
115 PTZ00207 hypothetical protein; 99.1 1.5E-09 3.3E-14 95.8 13.4 132 9-167 48-180 (591)
116 PRK09848 glucuronide transport 99.1 4.1E-10 8.8E-15 95.7 8.9 140 8-169 249-388 (448)
117 TIGR00889 2A0110 nucleoside tr 99.1 1.8E-09 3.9E-14 91.5 12.6 135 8-170 229-372 (418)
118 TIGR01272 gluP glucose/galacto 99.1 2.1E-09 4.5E-14 87.9 11.7 133 5-171 158-292 (310)
119 PRK06814 acylglycerophosphoeth 99.1 1.8E-09 3.9E-14 101.3 12.4 118 23-170 52-171 (1140)
120 TIGR00892 2A0113 monocarboxyla 99.1 2E-09 4.4E-14 92.0 11.6 137 3-170 257-396 (455)
121 PRK10504 putative transporter; 99.1 2.2E-09 4.7E-14 91.5 11.7 134 8-169 282-415 (471)
122 PRK11128 putative 3-phenylprop 99.1 2.4E-09 5.2E-14 89.1 11.8 130 6-171 23-156 (382)
123 KOG2615 Permease of the major 99.0 8.9E-10 1.9E-14 91.9 8.4 117 20-168 65-181 (451)
124 PRK11128 putative 3-phenylprop 99.0 5E-09 1.1E-13 87.2 12.9 134 5-171 223-357 (382)
125 PRK09874 drug efflux system pr 99.0 4.2E-09 9E-14 87.5 12.4 134 7-171 239-375 (408)
126 PRK15402 multidrug efflux syst 99.0 8.9E-09 1.9E-13 86.1 14.1 135 9-170 237-371 (406)
127 TIGR00881 2A0104 phosphoglycer 99.0 6.4E-09 1.4E-13 84.6 12.9 140 4-171 233-374 (379)
128 PRK09528 lacY galactoside perm 99.0 2.6E-09 5.7E-14 89.8 10.7 132 9-171 245-380 (420)
129 TIGR02332 HpaX 4-hydroxyphenyl 99.0 3.3E-09 7.1E-14 89.5 11.1 137 3-170 258-396 (412)
130 TIGR01299 synapt_SV2 synaptic 99.0 3.1E-09 6.7E-14 96.2 11.3 112 26-168 598-709 (742)
131 TIGR00897 2A0118 polyol permea 99.0 1.1E-08 2.3E-13 85.8 13.6 140 3-171 238-378 (402)
132 TIGR00901 2A0125 AmpG-related 99.0 4.5E-09 9.7E-14 86.2 11.0 130 3-153 225-355 (356)
133 TIGR00889 2A0110 nucleoside tr 99.0 5.5E-09 1.2E-13 88.5 11.7 96 7-125 22-117 (418)
134 PRK11273 glpT sn-glycerol-3-ph 99.0 8E-09 1.7E-13 88.0 12.5 141 3-171 269-412 (452)
135 PF07690 MFS_1: Major Facilita 99.0 3.6E-09 7.9E-14 85.5 9.8 129 4-160 223-352 (352)
136 TIGR00902 2A0127 phenyl propri 99.0 9E-09 1.9E-13 85.7 12.2 130 6-171 23-156 (382)
137 COG2223 NarK Nitrate/nitrite t 99.0 5.4E-09 1.2E-13 87.9 10.7 134 7-170 33-166 (417)
138 TIGR00879 SP MFS transporter, 99.0 2.1E-08 4.5E-13 83.8 14.4 138 11-169 307-445 (481)
139 PRK09669 putative symporter Ya 99.0 6.6E-09 1.4E-13 88.3 11.1 134 6-163 28-166 (444)
140 PRK09669 putative symporter Ya 99.0 6.9E-09 1.5E-13 88.1 11.1 127 23-171 264-390 (444)
141 PRK10429 melibiose:sodium symp 99.0 7.3E-09 1.6E-13 88.9 11.0 133 5-161 24-161 (473)
142 PRK11010 ampG muropeptide tran 98.9 1.8E-08 3.9E-13 87.2 13.5 139 6-171 241-380 (491)
143 PRK11663 regulatory protein Uh 98.9 1.3E-08 2.8E-13 86.3 12.2 140 4-171 260-401 (434)
144 PF11700 ATG22: Vacuole efflux 98.9 2.4E-08 5.3E-13 86.4 13.7 143 5-170 299-443 (477)
145 PRK11902 ampG muropeptide tran 98.9 2.9E-08 6.3E-13 83.1 13.6 132 7-168 19-155 (402)
146 PF05977 MFS_3: Transmembrane 98.9 1.6E-08 3.5E-13 88.4 12.4 127 17-169 39-165 (524)
147 COG2271 UhpC Sugar phosphate p 98.9 3.8E-09 8.3E-14 89.1 8.0 128 11-169 52-181 (448)
148 TIGR02718 sider_RhtX_FptX side 98.9 2.8E-08 6E-13 82.8 13.2 142 5-171 226-368 (390)
149 PRK10091 MFS transport protein 98.9 3.1E-08 6.7E-13 82.4 13.1 131 8-169 220-350 (382)
150 TIGR00710 efflux_Bcr_CflA drug 98.9 3.9E-08 8.5E-13 80.7 13.4 136 5-168 224-360 (385)
151 COG2223 NarK Nitrate/nitrite t 98.9 7.3E-09 1.6E-13 87.1 9.1 141 3-168 234-374 (417)
152 PRK10406 alpha-ketoglutarate t 98.9 3.3E-08 7.2E-13 83.7 13.4 137 3-166 259-396 (432)
153 TIGR00788 fbt folate/biopterin 98.9 1.5E-08 3.2E-13 87.2 10.8 135 7-170 45-185 (468)
154 PRK10133 L-fucose transporter; 98.9 1.4E-08 3.1E-13 86.5 10.6 132 5-170 276-408 (438)
155 KOG0569 Permease of the major 98.9 2E-08 4.3E-13 86.8 11.3 109 25-161 62-170 (485)
156 PRK10213 nepI ribonucleoside t 98.9 6.4E-08 1.4E-12 81.2 14.1 135 5-171 234-368 (394)
157 COG2271 UhpC Sugar phosphate p 98.9 1.6E-08 3.5E-13 85.3 9.4 139 4-170 269-410 (448)
158 PRK10077 xylE D-xylose transpo 98.9 1E-07 2.2E-12 81.1 14.5 126 14-166 297-423 (479)
159 PRK08633 2-acyl-glycerophospho 98.8 3.7E-08 8.1E-13 92.1 12.7 131 5-166 250-381 (1146)
160 COG2814 AraJ Arabinose efflux 98.8 1.4E-07 3.1E-12 79.5 14.1 138 2-171 226-363 (394)
161 PRK11646 multidrug resistance 98.8 5.2E-08 1.1E-12 81.9 11.3 131 8-169 229-359 (400)
162 TIGR00712 glpT glycerol-3-phos 98.8 3.5E-08 7.7E-13 83.7 9.9 141 4-171 268-410 (438)
163 TIGR00886 2A0108 nitrite extru 98.8 3.8E-08 8.1E-13 80.5 9.5 124 4-155 242-365 (366)
164 PRK10429 melibiose:sodium symp 98.8 4.8E-08 1E-12 83.9 10.3 131 21-170 264-394 (473)
165 PF00083 Sugar_tr: Sugar (and 98.8 1.5E-10 3.3E-15 97.8 -5.3 114 22-163 45-158 (451)
166 PRK15034 nitrate/nitrite trans 98.8 1.8E-07 3.9E-12 80.6 13.0 145 4-168 269-427 (462)
167 TIGR00882 2A0105 oligosacchari 98.7 1E-07 2.3E-12 79.5 10.6 132 9-171 237-372 (396)
168 PRK09848 glucuronide transport 98.7 1.3E-07 2.8E-12 80.4 11.3 137 6-164 27-172 (448)
169 PRK11010 ampG muropeptide tran 98.7 2.2E-07 4.9E-12 80.4 12.9 132 7-168 32-168 (491)
170 PRK11195 lysophospholipid tran 98.7 3.5E-07 7.6E-12 76.7 13.7 129 7-166 225-353 (393)
171 KOG0252 Inorganic phosphate tr 98.7 4E-08 8.7E-13 83.8 7.7 125 20-168 81-209 (538)
172 PRK06814 acylglycerophosphoeth 98.7 7.4E-08 1.6E-12 90.5 10.0 152 4-167 242-394 (1140)
173 TIGR00887 2A0109 phosphate:H+ 98.7 2.1E-07 4.6E-12 80.4 11.6 139 2-168 303-453 (502)
174 PF05977 MFS_3: Transmembrane 98.7 2.2E-07 4.7E-12 81.4 11.6 135 6-171 237-371 (524)
175 PLN00028 nitrate transmembrane 98.7 1.3E-07 2.8E-12 81.4 9.6 127 5-163 270-403 (476)
176 PRK11902 ampG muropeptide tran 98.7 7.7E-07 1.7E-11 74.5 13.7 132 9-171 231-367 (402)
177 COG2807 CynX Cyanate permease 98.7 3.6E-07 7.9E-12 76.0 11.3 139 2-171 223-361 (395)
178 COG2270 Permeases of the major 98.7 3.3E-07 7.1E-12 77.5 11.2 132 6-168 271-402 (438)
179 PRK11102 bicyclomycin/multidru 98.6 8.6E-07 1.9E-11 73.0 13.0 62 9-71 216-277 (377)
180 PF05631 DUF791: Protein of un 98.6 5.9E-07 1.3E-11 74.6 11.9 93 16-133 62-154 (354)
181 PRK10473 multidrug efflux syst 98.6 9.5E-07 2E-11 73.4 13.1 64 10-74 226-289 (392)
182 KOG4686 Predicted sugar transp 98.6 1.8E-07 3.8E-12 76.1 7.9 126 11-169 288-414 (459)
183 PRK11462 putative transporter; 98.6 1.1E-06 2.3E-11 75.6 13.1 134 7-163 29-166 (460)
184 PRK10054 putative transporter; 98.6 2.8E-07 6E-12 77.4 9.4 132 9-171 228-361 (395)
185 PRK11043 putative transporter; 98.6 1.9E-06 4.2E-11 71.8 13.9 136 5-168 221-356 (401)
186 PRK11462 putative transporter; 98.6 1E-06 2.2E-11 75.7 12.4 135 12-169 253-387 (460)
187 KOG2504 Monocarboxylate transp 98.5 6.6E-07 1.4E-11 78.1 9.9 130 10-171 68-198 (509)
188 PF13347 MFS_2: MFS/sugar tran 98.5 3.5E-07 7.6E-12 77.3 7.8 138 7-166 21-163 (428)
189 TIGR00894 2A0114euk Na(+)-depe 98.5 2.8E-06 6E-11 72.4 13.0 137 3-168 277-421 (465)
190 TIGR00885 fucP L-fucose:H+ sym 98.5 1.3E-06 2.9E-11 73.9 10.6 131 5-169 250-381 (410)
191 COG2211 MelB Na+/melibiose sym 98.5 1.2E-06 2.7E-11 75.3 10.2 140 10-171 259-398 (467)
192 PF12832 MFS_1_like: MFS_1 lik 98.5 6.8E-07 1.5E-11 58.7 6.7 57 6-64 19-75 (77)
193 PF06609 TRI12: Fungal trichot 98.5 1.9E-06 4.1E-11 76.4 11.0 97 9-131 65-161 (599)
194 TIGR00903 2A0129 major facilit 98.4 2.9E-06 6.4E-11 70.9 10.6 130 2-167 207-340 (368)
195 KOG2504 Monocarboxylate transp 98.4 2.4E-06 5.3E-11 74.6 9.2 131 8-170 319-451 (509)
196 KOG2533 Permease of the major 98.3 5.8E-06 1.2E-10 72.0 11.3 122 16-168 74-195 (495)
197 COG0477 ProP Permeases of the 98.3 1.8E-05 3.9E-10 60.8 12.9 124 16-167 30-156 (338)
198 TIGR00898 2A0119 cation transp 98.3 5E-06 1.1E-10 71.4 10.5 104 32-164 364-467 (505)
199 PRK11652 emrD multidrug resist 98.3 2.4E-05 5.2E-10 65.1 13.8 131 10-169 230-360 (394)
200 COG2807 CynX Cyanate permease 98.3 1.4E-05 3.1E-10 66.7 12.1 128 10-170 34-161 (395)
201 PF03825 Nuc_H_symport: Nucleo 98.3 1.1E-05 2.4E-10 68.4 11.1 101 7-131 22-122 (400)
202 TIGR02718 sider_RhtX_FptX side 98.3 1.6E-05 3.6E-10 66.1 11.7 139 6-171 20-161 (390)
203 KOG0569 Permease of the major 98.2 4.6E-05 1E-09 66.1 14.6 103 16-133 298-401 (485)
204 PF03092 BT1: BT1 family; Int 98.2 2.4E-05 5.2E-10 66.9 12.4 137 9-170 11-151 (433)
205 PF01306 LacY_symp: LacY proto 98.2 2.6E-06 5.7E-11 72.4 5.9 54 7-61 27-80 (412)
206 PF06813 Nodulin-like: Nodulin 98.1 8.6E-05 1.9E-09 59.3 12.3 104 10-131 24-127 (250)
207 KOG4686 Predicted sugar transp 98.1 1.8E-07 3.8E-12 76.1 -3.3 135 10-171 66-200 (459)
208 TIGR00788 fbt folate/biopterin 98.0 1.6E-05 3.4E-10 68.6 7.3 136 15-171 280-415 (468)
209 COG2211 MelB Na+/melibiose sym 98.0 0.0001 2.2E-09 63.6 11.4 140 6-168 31-174 (467)
210 PF03209 PUCC: PUCC protein; 97.9 0.00024 5.3E-09 60.1 12.8 101 12-132 233-333 (403)
211 PF03825 Nuc_H_symport: Nucleo 97.9 0.00036 7.7E-09 59.3 13.2 139 7-171 227-366 (400)
212 PRK10207 dipeptide/tripeptide 97.9 0.0002 4.3E-09 62.2 11.4 139 6-166 288-438 (489)
213 PRK15403 multidrug efflux syst 97.8 0.00045 9.8E-09 58.3 12.9 102 5-125 236-337 (413)
214 PF03209 PUCC: PUCC protein; 97.8 0.0004 8.7E-09 58.8 12.0 141 14-170 6-152 (403)
215 KOG3764 Vesicular amine transp 97.7 2.6E-05 5.6E-10 65.9 3.7 139 8-171 291-431 (464)
216 COG0738 FucP Fucose permease [ 97.7 0.00034 7.4E-09 59.2 9.5 132 6-171 255-386 (422)
217 PF03137 OATP: Organic Anion T 97.6 8.8E-06 1.9E-10 71.6 -0.9 155 5-167 20-201 (539)
218 KOG0253 Synaptic vesicle trans 97.6 0.00031 6.7E-09 59.3 7.9 98 11-133 101-198 (528)
219 TIGR00924 yjdL_sub1_fam amino 97.6 0.0013 2.8E-08 56.8 11.9 140 7-167 292-441 (475)
220 KOG2325 Predicted transporter/ 97.6 0.00067 1.5E-08 58.9 10.0 127 11-165 58-187 (488)
221 KOG2816 Predicted transporter 97.6 0.00043 9.3E-09 59.9 8.8 104 33-170 72-175 (463)
222 PRK09584 tppB putative tripept 97.5 0.0014 3E-08 57.0 11.8 114 29-164 322-439 (500)
223 KOG2532 Permease of the major 97.4 0.0012 2.7E-08 57.1 9.8 51 2-52 273-323 (466)
224 KOG2563 Permease of the major 97.4 0.0022 4.8E-08 55.1 11.0 134 10-167 67-200 (480)
225 PF05978 UNC-93: Ion channel r 97.4 0.0043 9.4E-08 46.1 11.3 104 28-163 42-145 (156)
226 KOG3626 Organic anion transpor 97.4 0.00038 8.3E-09 62.9 6.4 156 5-168 114-298 (735)
227 PF11700 ATG22: Vacuole efflux 97.4 0.0055 1.2E-07 53.3 13.2 116 26-163 73-208 (477)
228 KOG3762 Predicted transporter 97.3 0.0005 1.1E-08 60.3 5.7 69 5-74 29-97 (618)
229 PTZ00207 hypothetical protein; 97.3 0.002 4.3E-08 57.4 9.5 121 16-169 381-514 (591)
230 KOG0637 Sucrose transporter an 97.2 0.00014 3.1E-09 62.3 1.4 144 9-166 54-202 (498)
231 KOG2533 Permease of the major 97.1 0.0016 3.5E-08 56.8 7.3 64 3-66 289-355 (495)
232 KOG0253 Synaptic vesicle trans 97.1 0.0021 4.6E-08 54.4 7.5 100 33-163 391-490 (528)
233 TIGR00805 oat sodium-independe 97.1 0.001 2.2E-08 59.7 5.9 69 2-71 345-416 (633)
234 PF06779 DUF1228: Protein of u 97.1 0.0061 1.3E-07 40.7 8.3 65 10-75 14-78 (85)
235 PF01306 LacY_symp: LacY proto 96.9 0.0054 1.2E-07 52.4 8.6 131 10-171 243-377 (412)
236 COG2270 Permeases of the major 96.9 0.0075 1.6E-07 51.5 9.3 129 6-161 34-169 (438)
237 KOG2816 Predicted transporter 96.8 0.013 2.8E-07 50.8 9.8 125 11-166 265-389 (463)
238 PF00083 Sugar_tr: Sugar (and 96.4 1.7E-05 3.7E-10 67.0 -10.1 133 12-169 277-411 (451)
239 TIGR01272 gluP glucose/galacto 96.3 0.0099 2.1E-07 48.5 5.7 63 98-167 8-70 (310)
240 KOG0254 Predicted transporter 96.3 0.15 3.3E-06 44.4 13.3 57 17-75 324-380 (513)
241 TIGR01301 GPH_sucrose GPH fami 96.1 0.13 2.9E-06 44.8 11.9 133 27-168 309-443 (477)
242 PF06609 TRI12: Fungal trichot 96.0 0.058 1.3E-06 48.3 9.7 135 3-166 326-464 (599)
243 KOG2615 Permease of the major 95.8 0.033 7.1E-07 47.4 6.7 132 7-168 280-413 (451)
244 PF01770 Folate_carrier: Reduc 95.7 0.2 4.4E-06 42.9 11.1 68 7-75 23-92 (412)
245 KOG4332 Predicted sugar transp 95.6 0.0043 9.4E-08 50.6 0.7 88 13-125 62-149 (454)
246 PF06963 FPN1: Ferroportin1 (F 95.2 1.2 2.5E-05 38.5 14.4 132 8-161 279-410 (432)
247 PF03137 OATP: Organic Anion T 95.2 0.0055 1.2E-07 54.1 0.0 160 3-169 321-514 (539)
248 PRK03612 spermidine synthase; 94.8 0.6 1.3E-05 41.2 11.7 39 12-50 39-77 (521)
249 PRK15462 dipeptide/tripeptide 94.4 1.4 3E-05 38.7 13.0 122 20-166 308-437 (493)
250 TIGR00926 2A1704 Peptide:H+ sy 94.2 0.87 1.9E-05 41.3 11.6 136 11-166 8-143 (654)
251 KOG0252 Inorganic phosphate tr 93.7 0.14 3E-06 44.6 5.2 139 2-168 319-467 (538)
252 TIGR00769 AAA ADP/ATP carrier 93.4 1.7 3.7E-05 38.0 11.6 132 23-167 43-189 (472)
253 KOG1330 Sugar transporter/spin 93.4 0.21 4.6E-06 43.3 5.9 135 13-169 273-412 (493)
254 KOG0255 Synaptic vesicle trans 91.4 4.6 0.0001 34.9 11.9 102 35-164 362-463 (521)
255 KOG3098 Uncharacterized conser 91.1 5.5 0.00012 34.7 11.8 91 33-131 289-384 (461)
256 KOG3762 Predicted transporter 88.9 0.69 1.5E-05 41.1 4.6 93 16-132 399-491 (618)
257 KOG3626 Organic anion transpor 88.6 0.78 1.7E-05 42.1 4.9 69 2-70 407-477 (735)
258 COG5336 Uncharacterized protei 87.5 3.4 7.3E-05 28.8 6.3 48 26-73 45-92 (116)
259 KOG3098 Uncharacterized conser 87.3 6.5 0.00014 34.3 9.5 99 29-159 56-154 (461)
260 KOG2563 Permease of the major 84.3 2.3 5E-05 37.0 5.3 52 17-68 295-346 (480)
261 KOG3574 Acetyl-CoA transporter 77.4 16 0.00034 31.7 7.8 136 5-162 48-188 (510)
262 PF09527 ATPase_gene1: Putativ 76.9 13 0.00029 22.1 6.1 37 32-68 9-45 (55)
263 TIGR00880 2_A_01_02 Multidrug 75.6 14 0.0003 24.7 6.1 47 22-69 86-132 (141)
264 KOG4332 Predicted sugar transp 72.6 28 0.00061 28.9 7.9 105 26-155 285-392 (454)
265 PF03092 BT1: BT1 family; Int 72.4 7.9 0.00017 33.2 5.0 133 16-171 245-382 (433)
266 PF02487 CLN3: CLN3 protein; 68.6 32 0.0007 29.5 7.8 62 100-168 335-396 (402)
267 KOG4830 Predicted sugar transp 61.9 8.8 0.00019 31.6 3.0 100 9-122 39-150 (412)
268 PF11947 DUF3464: Protein of u 59.9 59 0.0013 24.1 6.8 91 45-159 56-146 (153)
269 TIGR02230 ATPase_gene1 F0F1-AT 55.5 64 0.0014 22.1 6.0 39 30-68 49-87 (100)
270 PF00854 PTR2: POT family; In 55.3 55 0.0012 27.0 6.9 69 5-74 49-122 (372)
271 TIGR00939 2a57 Equilibrative N 52.8 1.3E+02 0.0028 26.0 8.9 118 24-161 308-426 (437)
272 PF01770 Folate_carrier: Reduc 50.3 1E+02 0.0022 26.6 7.7 84 25-130 287-370 (412)
273 PF03219 TLC: TLC ATP/ADP tran 47.0 1.8E+02 0.0038 25.7 8.9 135 21-168 56-205 (491)
274 PF02694 UPF0060: Uncharacteri 44.9 37 0.00079 23.6 3.5 53 20-73 51-103 (107)
275 KOG3097 Predicted membrane pro 43.1 1.1E+02 0.0024 26.1 6.6 65 39-128 74-138 (390)
276 PF02487 CLN3: CLN3 protein; 43.0 91 0.002 26.8 6.4 81 25-130 61-141 (402)
277 PRK02237 hypothetical protein; 41.8 68 0.0015 22.3 4.4 50 23-73 56-105 (109)
278 TIGR00806 rfc RFC reduced fola 41.1 95 0.0021 27.6 6.3 84 26-131 301-384 (511)
279 COG1268 BioY Uncharacterized c 40.4 68 0.0015 24.5 4.7 21 31-51 90-110 (184)
280 PF02659 DUF204: Domain of unk 40.3 87 0.0019 19.2 5.3 46 19-64 16-64 (67)
281 PF06963 FPN1: Ferroportin1 (F 40.1 1.9E+02 0.0041 25.1 7.9 60 10-70 25-84 (432)
282 PF05915 DUF872: Eukaryotic pr 39.3 61 0.0013 22.7 4.0 23 53-75 40-62 (115)
283 PRK11469 hypothetical protein; 39.3 1.2E+02 0.0026 23.0 5.9 53 18-71 129-182 (188)
284 COG2119 Predicted membrane pro 38.0 1.8E+02 0.004 22.3 6.6 38 30-68 141-178 (190)
285 PF02632 BioY: BioY family; I 36.1 1.1E+02 0.0023 22.4 5.1 25 30-55 60-84 (148)
286 PRK10692 hypothetical protein; 35.7 52 0.0011 22.0 3.0 22 52-73 2-23 (92)
287 COG3104 PTR2 Dipeptide/tripept 35.5 3.2E+02 0.007 24.3 11.3 121 20-164 324-451 (498)
288 PF09930 DUF2162: Predicted tr 34.9 2.3E+02 0.0049 22.3 9.0 64 12-79 120-183 (224)
289 PF05232 BTP: Bacterial Transm 34.5 1.2E+02 0.0026 19.0 5.6 44 11-54 22-65 (67)
290 PF05631 DUF791: Protein of un 34.2 2.9E+02 0.0063 23.4 10.7 56 16-71 151-212 (354)
291 COG3086 RseC Positive regulato 33.9 1.9E+02 0.0042 21.3 6.2 32 33-65 82-113 (150)
292 KOG2325 Predicted transporter/ 31.5 26 0.00057 30.8 1.4 45 89-133 376-421 (488)
293 PF10762 DUF2583: Protein of u 30.5 63 0.0014 21.5 2.7 22 52-73 2-23 (89)
294 PF08551 DUF1751: Eukaryotic i 28.1 1.9E+02 0.0041 19.4 5.6 40 34-73 25-64 (99)
295 KOG3810 Micronutrient transpor 27.7 1.5E+02 0.0032 25.6 5.0 80 29-130 277-356 (433)
296 TIGR01667 YCCS_YHJK integral m 24.7 1E+02 0.0022 28.5 4.0 33 42-74 42-77 (701)
297 PF04226 Transgly_assoc: Trans 21.9 1.8E+02 0.0038 16.9 4.1 35 36-71 4-39 (48)
298 PF01733 Nucleoside_tran: Nucl 21.8 28 0.0006 28.3 -0.2 113 28-161 187-302 (309)
299 TIGR01666 YCCS hypothetical me 21.4 1.2E+02 0.0027 28.0 3.8 33 42-74 42-77 (704)
300 KOG3097 Predicted membrane pro 20.2 4.5E+02 0.0098 22.5 6.5 54 20-74 307-360 (390)
No 1
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.91 E-value=4.2e-25 Score=187.44 Aligned_cols=145 Identities=23% Similarity=0.411 Sum_probs=134.9
Q ss_pred CceeccHHHHHHHhhHhhC----CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhh
Q 045901 1 MASNGLMPNMILYLCREYN----METTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAI 76 (171)
Q Consensus 1 ~~~~gv~~~l~~yl~~~lg----~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~ 76 (171)
|+|||+...+..|++.+++ +|+++|..+.+.|....++++++|||+|||++|+||++..|.++..+|.++++.+.
T Consensus 35 FsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~- 113 (498)
T COG3104 35 FSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS- 113 (498)
T ss_pred HhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc-
Confidence 5899999999999999988 99999999999999999999999999999999999999999999999999887652
Q ss_pred cCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 045901 77 FPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGS 156 (171)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~ 156 (171)
......+++++.++.+|.|+++|++.++++|+++++||+ |+..|+++|++.|+|+
T Consensus 114 --------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-----rD~gFt~fY~~iNiGs 168 (498)
T COG3104 114 --------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-----RDGGFTLFYMGINIGS 168 (498)
T ss_pred --------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-----cCCCccEEEEEeehHH
Confidence 013567899999999999999999999999999998884 7899999999999999
Q ss_pred HHHhHHHHhhccccC
Q 045901 157 MLSATFIVYIQDNLG 171 (171)
Q Consensus 157 ~i~~~~~~~i~~~~g 171 (171)
++++.+.+++++++|
T Consensus 169 l~~p~i~~~~~~~~g 183 (498)
T COG3104 169 LIAPIITGLLAINYG 183 (498)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999999876
No 2
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=99.90 E-value=2.6e-23 Score=181.80 Aligned_cols=170 Identities=41% Similarity=0.700 Sum_probs=155.1
Q ss_pred CceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 1 MASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 1 ~~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
+++||+..|+..|++++++.+..+++..++.|.+.+.+.|+++++++|.|+||++++.++.+++.+|.++++.+...|.+
T Consensus 51 ~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l 130 (571)
T KOG1237|consen 51 LAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPAL 130 (571)
T ss_pred HhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999998889998
Q ss_pred CCCcc--cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 045901 81 KPPVC--DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSML 158 (171)
Q Consensus 81 ~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i 158 (171)
.|+.| ......|+.++..+...++.++.++++|.|+.+|+..++++||+++.+++++ +.+.++|||+|+..|+|.++
T Consensus 131 ~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~-~~~~~fFnW~yf~~~~g~l~ 209 (571)
T KOG1237|consen 131 LPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV-KGIPSFFNWFYFSQNGGALL 209 (571)
T ss_pred CCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh-hCcccchhHHHHHHHHHHHH
Confidence 88876 3334468888878888999999999999999999999999999997666554 34669999999999999999
Q ss_pred HhHHHHhhccccC
Q 045901 159 SATFIVYIQDNLG 171 (171)
Q Consensus 159 ~~~~~~~i~~~~g 171 (171)
+.++..|+|+++|
T Consensus 210 a~t~~vyiq~~~~ 222 (571)
T KOG1237|consen 210 AQTVLVYIQDNVG 222 (571)
T ss_pred HHHHHHhhhhccc
Confidence 9999999999875
No 3
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.89 E-value=2.1e-22 Score=178.62 Aligned_cols=151 Identities=25% Similarity=0.496 Sum_probs=133.0
Q ss_pred CceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 1 MASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 1 ~~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
++|||+..++.+|+++++|+++.++..+.+.|.....+.|+++|+++|+++||+|++.++.++..+|..++++++. |..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999887652 211
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
.+ ..+....++++.++++|.|+++|+..++++||++++++ +++.++|+|+|+++|+|+++++
T Consensus 80 ~~--------------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~----~~~~s~F~~fY~~iNiGSlis~ 141 (654)
T TIGR00926 80 GH--------------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL----SLRSRFFSFFYFAINAGSLIST 141 (654)
T ss_pred cc--------------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch----hHHHHHHHHHHHHHHHHHHHHH
Confidence 10 11345577999999999999999999999999976433 3589999999999999999999
Q ss_pred HHHHhhcccc
Q 045901 161 TFIVYIQDNL 170 (171)
Q Consensus 161 ~~~~~i~~~~ 170 (171)
.+.+++++++
T Consensus 142 ~i~~~l~~~~ 151 (654)
T TIGR00926 142 IITPILRGDV 151 (654)
T ss_pred HHHHHHHHhh
Confidence 9999998653
No 4
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=7.8e-22 Score=170.18 Aligned_cols=144 Identities=19% Similarity=0.362 Sum_probs=128.3
Q ss_pred CceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 1 MASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 1 ~~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
++||++..++++|+++++|+++.+++.+.+.+.....+.++++||++||++||||++.++.++..+|++++.++..
T Consensus 28 ~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~---- 103 (489)
T PRK10207 28 FGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLL---- 103 (489)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 4789999999999999999999999999999999999999999999999559999999999999999998877541
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
....+++++.++++|.|..+|+..++++|+++++++ +|++.++++|+..|+|+++++
T Consensus 104 ------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~-----~~~~~~~~~~~~~nig~~~g~ 160 (489)
T PRK10207 104 ------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP-----RLDGAFTLFYMSINIGSLISL 160 (489)
T ss_pred ------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch-----hhhcchhHHHHHHHHHHHHHH
Confidence 123456789999999999999999999999976543 367899999999999999999
Q ss_pred HHHHhhccccC
Q 045901 161 TFIVYIQDNLG 171 (171)
Q Consensus 161 ~~~~~i~~~~g 171 (171)
.+++++.+++|
T Consensus 161 ~l~g~l~~~~g 171 (489)
T PRK10207 161 SLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHhhC
Confidence 99999998764
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.85 E-value=7.7e-21 Score=163.32 Aligned_cols=144 Identities=20% Similarity=0.383 Sum_probs=128.5
Q ss_pred CceeccHHHHHHHhhHh--hCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcC
Q 045901 1 MASNGLMPNMILYLCRE--YNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFP 78 (171)
Q Consensus 1 ~~~~gv~~~l~~yl~~~--lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~ 78 (171)
++||++.+++++|++++ +|+++.+++.+.+.+.....++++++|+++||++||||++.++.++..++.+++.+++
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~--- 100 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI--- 100 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc---
Confidence 46899999999999988 9999999999999999999999999999999955999999999999999998877643
Q ss_pred CCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 045901 79 QEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSML 158 (171)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i 158 (171)
+.+.+++++.+.++|.|..+|+..++++|++++++++ +|+++++++|+..|+|.++
T Consensus 101 --------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~----~r~~~~~~~~~~~niG~~i 156 (475)
T TIGR00924 101 --------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP----RRDGGFTLFYMSINIGSFI 156 (475)
T ss_pred --------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc----cccceehhHHHHHHHHHHH
Confidence 3456778889999999999999999999999865532 3688999999999999999
Q ss_pred HhHHHHhhccccC
Q 045901 159 SATFIVYIQDNLG 171 (171)
Q Consensus 159 ~~~~~~~i~~~~g 171 (171)
++.+.++++++.|
T Consensus 157 g~~l~g~l~~~~g 169 (475)
T TIGR00924 157 SPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999988654
No 6
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.84 E-value=4.2e-20 Score=159.37 Aligned_cols=144 Identities=22% Similarity=0.379 Sum_probs=125.1
Q ss_pred CceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 1 MASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 1 ~~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
++||++...++.|+++++|+++.+++.+...+.....++++++||++||++||||++.++.++..+|.+++.....
T Consensus 23 fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~---- 98 (493)
T PRK15462 23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI---- 98 (493)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc----
Confidence 3689999999999999999999999999999999999999999999999889999999999999999876653210
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
....+.+++.+..+|.|..+|+.+++++|+++++++ +|.+.++++|...|+|+.+++
T Consensus 99 ------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~-----~R~sgf~i~Y~~~nlG~~iap 155 (493)
T PRK15462 99 ------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP-----RRDGGFSLMYAAGNVGSIIAP 155 (493)
T ss_pred ------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc-----cccceehHHHHHHHHHHHHHH
Confidence 112355667778899999999999999999987654 378899999999999999999
Q ss_pred HHHHhhccccC
Q 045901 161 TFIVYIQDNLG 171 (171)
Q Consensus 161 ~~~~~i~~~~g 171 (171)
.+.+++.++.|
T Consensus 156 ~l~g~L~~~~G 166 (493)
T PRK15462 156 IACGYAQEEYS 166 (493)
T ss_pred HHHHHHHhhhC
Confidence 99999987654
No 7
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.79 E-value=1.9e-18 Score=149.46 Aligned_cols=143 Identities=22% Similarity=0.410 Sum_probs=124.2
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+||++..+++.|+++++|+++.+++.+.+.+.......++++||++||++|||+++.++.++..++..++.++.
T Consensus 36 ~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~------ 109 (500)
T PRK09584 36 GYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG------ 109 (500)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc------
Confidence 57899999999999999999999999999888888888889999999955999999999999999988877643
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
.....+++++.++++|.|...|+..++++|+++++++ ++++.++++|+..|+|+++++.
T Consensus 110 ----------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~-----~~~~~~~~~~~~~~iG~~~gp~ 168 (500)
T PRK09584 110 ----------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP-----RLDGAFTMYYMSINIGSFFSML 168 (500)
T ss_pred ----------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch-----hhhhcchHHHHHHHHHHHHHHH
Confidence 1234567888899999999999999999999975432 3567899999999999999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.++.|
T Consensus 169 i~g~l~~~~g 178 (500)
T PRK09584 169 ATPWLAAKYG 178 (500)
T ss_pred HHHHHHHhhC
Confidence 9999988654
No 8
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.59 E-value=1.3e-14 Score=117.49 Aligned_cols=133 Identities=21% Similarity=0.322 Sum_probs=114.3
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...++.++.+++|.++.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----------- 83 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAFAS----------- 83 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhhhh-----------
Confidence 34455588889999999999999999999999999999999998 999999999999999965555432
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+++++++.|++.+...+...+++.|.+++++ |++.+++.....++|.++++.+.+++
T Consensus 84 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~g~~~g~~l~~~l 144 (352)
T PF07690_consen 84 ------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE-------RGRAFGILSAGFSLGSILGPLLGGFL 144 (352)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC-------HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ------------hHHHHhhhccccccccccccccccccccccchhhh-------hhhccccccchhhhhhhcccchhhhh
Confidence 34578899999999999999999999999987632 68899999999999999999999988
Q ss_pred cccc
Q 045901 167 QDNL 170 (171)
Q Consensus 167 ~~~~ 170 (171)
.++.
T Consensus 145 ~~~~ 148 (352)
T PF07690_consen 145 ISYF 148 (352)
T ss_dssp CCHC
T ss_pred hhcc
Confidence 7643
No 9
>PRK12382 putative transporter; Provisional
Probab=99.59 E-value=1.5e-14 Score=120.26 Aligned_cols=143 Identities=17% Similarity=0.207 Sum_probs=114.5
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
..+.++.|+++++|+|+.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+........+...
T Consensus 34 ~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~---- 108 (392)
T PRK12382 34 PLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAGLAYLLAAILPVSA---- 108 (392)
T ss_pred HhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHHHHHHhhhccccch----
Confidence 345677789999999999999999999999999999999999998 999999999988877655433332111100
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
..+...+++++.+.|+|.+...+...+.+.|..+++ +|+++.+++..+.++|.++++.+.++
T Consensus 109 -----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~-------~r~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 109 -----------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK-------HSGKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc-------ccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 125677889999999999998888888888987532 26788888888999999999998888
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.+..|
T Consensus 171 l~~~~g 176 (392)
T PRK12382 171 LHSHFG 176 (392)
T ss_pred HHhccC
Confidence 776543
No 10
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=2.8e-14 Score=119.68 Aligned_cols=135 Identities=16% Similarity=0.185 Sum_probs=114.2
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
++.+.++++.|+++++|+++.+++.+.+.+.....+..++.|+++||+ ||||.+.++.++..++.+++.+.+
T Consensus 23 ~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~~~~~~~~~~~------- 94 (395)
T PRK10054 23 RGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFASGFIAIPLVN------- 94 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHh-------
Confidence 455678899999999999999999999999999999999999999997 999999999999988887776653
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
+.+.+++.+.+.+.+.+...+...+...|..+++ +|++.+++.+...|+|.++++.+
T Consensus 95 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~lg~~igp~l 151 (395)
T PRK10054 95 ----------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST-------SKTKIFSLNYTMLNIGWTVGPPL 151 (395)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666667777777777888888888887532 37889999999999999999999
Q ss_pred HHhhcc
Q 045901 163 IVYIQD 168 (171)
Q Consensus 163 ~~~i~~ 168 (171)
.+++.+
T Consensus 152 ~~~l~~ 157 (395)
T PRK10054 152 GTLLVM 157 (395)
T ss_pred HHHHHH
Confidence 888754
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.57 E-value=3.6e-14 Score=119.18 Aligned_cols=135 Identities=17% Similarity=0.217 Sum_probs=118.5
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+++.+.+.++.|+++++|+|+.+.+.+.+.......+..+++|+++||+ ||||.+.++.++..++.+++...+
T Consensus 25 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~------ 97 (400)
T PRK11646 25 GFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFATMAIAH------ 97 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHHHHHHhc------
Confidence 4567788899999999999999999999999999999999999999998 999999999999999988776543
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
+.+.+++.+.+.+++.+...|...+.+.|..+++ +|+++.++.+...++|..+++.
T Consensus 98 -----------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~a~~~~~~~~~~g~~ig~~ 153 (400)
T PRK11646 98 -----------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPH-------QRGRFFSLLMMQDSAGAVIGAL 153 (400)
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788889999999989999999998887532 3788999999999999999999
Q ss_pred HHHhhc
Q 045901 162 FIVYIQ 167 (171)
Q Consensus 162 ~~~~i~ 167 (171)
+.+++.
T Consensus 154 l~g~l~ 159 (400)
T PRK11646 154 LGSWLL 159 (400)
T ss_pred HHHHHH
Confidence 988876
No 12
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.56 E-value=2.3e-15 Score=127.29 Aligned_cols=122 Identities=17% Similarity=0.224 Sum_probs=112.9
Q ss_pred HhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCc
Q 045901 16 REYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESA 95 (171)
Q Consensus 16 ~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 95 (171)
+.+|.++...+.+-++|.+...+..++.|+++||| .||+++.+|..++.++.+...++.
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~~~~fs~-------------------- 119 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVFASGFSN-------------------- 119 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHHHHHHHH--------------------
Confidence 46899999999999999999999999999999999 999999999999999999888764
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 96 TASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 96 ~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
++|.+.+.|.+.|+|.+...|.++++++|.++++ +|++.+.|||+++++|+.+|+.+++++.+
T Consensus 120 ---~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~-------~Rs~~~~ify~~ipvGsglG~vvgs~va~ 182 (493)
T KOG1330|consen 120 ---HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDD-------KRSRVLGIFYFAIPVGSGLGYVVGSVVAS 182 (493)
T ss_pred ---HHHHHHHHHHHhccchhhhcccchhHhhhcCcch-------hhhHHHHHhhhhcccccceeEEeeeeecc
Confidence 6899999999999999999999999999999753 38999999999999999999888777655
No 13
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.56 E-value=9.5e-15 Score=121.71 Aligned_cols=100 Identities=42% Similarity=0.745 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCC
Q 045901 54 YPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGN 133 (171)
Q Consensus 54 ~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~ 133 (171)
+|+++++.+++.+|.+++++++..+.. + ++.+...+++|+.++++|.|+++|++.++++||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~-~-------------~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL-P-------------SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC--------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh-h-------------hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 589999999999999999888733322 1 13356789999999999999999999999999999764
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Q 045901 134 GAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNLG 171 (171)
Q Consensus 134 ~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~g 171 (171)
+ ++++++|+|||+++|+|++++..+.+|+++++|
T Consensus 67 ~----~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~ 100 (372)
T PF00854_consen 67 D----SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG 100 (372)
T ss_dssp T----THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-
T ss_pred h----hhhhhhHHHHHHHHhhhhHhhcccchhhccccc
Confidence 3 258999999999999999999999999998765
No 14
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.56 E-value=3.6e-14 Score=118.14 Aligned_cols=142 Identities=16% Similarity=0.146 Sum_probs=115.7
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
..+.++.|+++++|.|+.+.+.+.+.+.....++.++.|+++||+ ||||++.++.++..++.+.+.++......
T Consensus 34 ~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~----- 107 (399)
T PRK05122 34 PLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCALSGLLYLLAGLLAAW----- 107 (399)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHHHHHHHHHhhhhhcc-----
Confidence 456788899999999999999999999999999999999999998 99999999999998887766554311100
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
...+...+++.+++.|+|.+...+.....+.|..+++ +|++..+++....++|..+++.+.++
T Consensus 108 ----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~l~~~ 170 (399)
T PRK05122 108 ----------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL-------HTGRVISWNGIATYGALAIGAPLGVL 170 (399)
T ss_pred ----------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh-------hhccchhhhhhhhhHHHHHHHHHHHH
Confidence 0113557888999999999999999999888987542 26778888888888998899888888
Q ss_pred hcccc
Q 045901 166 IQDNL 170 (171)
Q Consensus 166 i~~~~ 170 (171)
+.+..
T Consensus 171 l~~~~ 175 (399)
T PRK05122 171 LYHWG 175 (399)
T ss_pred HHHcc
Confidence 76644
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.55 E-value=1.3e-13 Score=113.65 Aligned_cols=131 Identities=14% Similarity=0.147 Sum_probs=113.0
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
......+++++|+++.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 32 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 98 (405)
T TIGR00891 32 ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFSAGTLACGFAP------------ 98 (405)
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 4445667789999999999999999999999999999999998 999999999999999988776543
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+++.+++.+++.|++.+...+...+++.|.++++ +|+++.+++....++|..+++.+.+.+.
T Consensus 99 -----------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 99 -----------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH-------LRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred -----------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh-------hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888999999999999999999999988642 3688899999999999999988877765
Q ss_pred cc
Q 045901 168 DN 169 (171)
Q Consensus 168 ~~ 169 (171)
+.
T Consensus 161 ~~ 162 (405)
T TIGR00891 161 PV 162 (405)
T ss_pred Hh
Confidence 43
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.55 E-value=6.8e-14 Score=113.93 Aligned_cols=133 Identities=12% Similarity=0.103 Sum_probs=116.1
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+...+++.+++|.++.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 13 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~----------- 80 (399)
T TIGR00893 13 LSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG----------- 80 (399)
T ss_pred hhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc-----------
Confidence 34455678889999999999999999999999999999999998 999999999999999988776653
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+++++++.|++.+...+...+++.|.+++ ++|++.+++.....++|.++++.+.+++
T Consensus 81 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l 141 (399)
T TIGR00893 81 ------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA-------SERATAVSIFNSAQGLGGIIGGPLVGWI 141 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH-------HHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 467788999999999999999999999998753 2378899999999999999999988887
Q ss_pred cccc
Q 045901 167 QDNL 170 (171)
Q Consensus 167 ~~~~ 170 (171)
.++.
T Consensus 142 ~~~~ 145 (399)
T TIGR00893 142 LIHF 145 (399)
T ss_pred HHhC
Confidence 6543
No 17
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.54 E-value=1.4e-13 Score=115.49 Aligned_cols=133 Identities=11% Similarity=0.161 Sum_probs=115.0
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+.++. +.+++|+++.+.+...+.+.....++.++.|+++||+ ||||.+..+.++..++.+++.++.
T Consensus 40 ~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~----------- 106 (394)
T PRK10213 40 VSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVLLTLSCLLVSFAN----------- 106 (394)
T ss_pred HhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHHHHC-----------
Confidence 334444 4468999999999999999999999999999999998 999999999999999888776543
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+++.+.+.|++.|...|...+++.|.++++ +|+++..+.....++|.++++.+.+++
T Consensus 107 ------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~-------~~~~a~~~~~~~~~~g~~ig~~l~~~l 167 (394)
T PRK10213 107 ------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPR-------TVPKALSVIFGAVSIALVIAAPLGSFL 167 (394)
T ss_pred ------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHh-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999999999999999999999988532 378899999999999999999999988
Q ss_pred ccccC
Q 045901 167 QDNLG 171 (171)
Q Consensus 167 ~~~~g 171 (171)
.+..|
T Consensus 168 ~~~~g 172 (394)
T PRK10213 168 GELIG 172 (394)
T ss_pred HhhcC
Confidence 77543
No 18
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.54 E-value=2e-13 Score=114.48 Aligned_cols=132 Identities=13% Similarity=0.172 Sum_probs=114.3
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
..+..++.+++|.|+.+.+.+.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++.++.
T Consensus 38 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------------ 104 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVGTGLSGLAS------------ 104 (426)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHh------------
Confidence 3444566789999999999999999999999999999999998 999999999999999998777654
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+.+.+++++.+.|+|.|...+....++.|.++++ +|+++.+++..+..+|.++++.+.+++.
T Consensus 105 -----------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 105 -----------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH-------LKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred -----------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh-------HhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 5678889999999999999999999999987542 3688888888999999999988888776
Q ss_pred ccc
Q 045901 168 DNL 170 (171)
Q Consensus 168 ~~~ 170 (171)
+..
T Consensus 167 ~~~ 169 (426)
T PRK12307 167 EAY 169 (426)
T ss_pred ccC
Confidence 643
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=99.53 E-value=1.3e-13 Score=114.76 Aligned_cols=128 Identities=12% Similarity=0.072 Sum_probs=111.7
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+.+.+++|.++.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+.+.+++
T Consensus 33 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~---------------- 95 (390)
T PRK03545 33 SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIASHVLSALAW---------------- 95 (390)
T ss_pred HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHHHhc----------------
Confidence 456679999999999999999999999999999999998 999999999999999988776653
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+++++++.|++.+...|...+++.|.++++ +|+++.+++....++|.++++.+.+.+.++.
T Consensus 96 -------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~ 160 (390)
T PRK03545 96 -------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAG-------KKAQALSLLATGTALAMVLGLPLGRVIGQYL 160 (390)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh-------hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 5677889999999999999999999999987632 3788999999999999999998888876654
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.53 E-value=1.7e-13 Score=118.14 Aligned_cols=131 Identities=11% Similarity=0.054 Sum_probs=114.1
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.+.+.+++|.+..+.+++.+.+..+..++.++.|+++||+ ||||.+.++.++..++.+++..++
T Consensus 29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~~~~~a~--------------- 92 (495)
T PRK14995 29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASLAAAFSP--------------- 92 (495)
T ss_pred HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHcC---------------
Confidence 3455679999999999999999999999999999999998 999999999999999999887654
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+++++.+.|+|.|+..|.....+.+.+.++ ++|+++++++....++|..+++.+.+++.++.
T Consensus 93 --------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~------~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 93 --------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE------KQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4677899999999999999888887777766431 24889999999999999999999999998765
Q ss_pred C
Q 045901 171 G 171 (171)
Q Consensus 171 g 171 (171)
|
T Consensus 159 g 159 (495)
T PRK14995 159 Y 159 (495)
T ss_pred C
Confidence 4
No 21
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.53 E-value=1.7e-13 Score=115.56 Aligned_cols=129 Identities=12% Similarity=0.021 Sum_probs=113.4
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
....+.+++++|+++.+.+.+.+.+..+..++.++.|+++||+ ||||.+..+.++..++.+++.++.
T Consensus 28 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~------------ 94 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMFAT------------ 94 (412)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 3455678899999999999999999999999999999999998 999999999999999998887754
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+.+.+++.+.+.|++.|...|....+++|.+++ ++|++..+++....++|.++++.+.+++.
T Consensus 95 -----------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 95 -----------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPA-------YFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred -----------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999888888998863 23788889998999999999998888774
No 22
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.51 E-value=1.5e-13 Score=116.77 Aligned_cols=134 Identities=15% Similarity=0.131 Sum_probs=116.2
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.....+.+.+++|.++.+.+++.+.+..+..++.++.|+++||+ ||||.+.++.++..++.+++..+.
T Consensus 21 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~----------- 88 (485)
T TIGR00711 21 VNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCGVAP----------- 88 (485)
T ss_pred HHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhCcC-----------
Confidence 33445666778999999999999999999999999999999998 999999999999999988776543
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+...+.+++++.|++.|...+...+++.|.++++ +|+++++++....++|..+++.+.+++
T Consensus 89 ------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l 149 (485)
T TIGR00711 89 ------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE-------KRGRAMAIWGLTVLVAPALGPTLGGWI 149 (485)
T ss_pred ------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH-------HHHHHHHHHHHHHHHHhhhhhccHhHh
Confidence 4667889999999999999999999999998532 378899999999999999999999988
Q ss_pred ccccC
Q 045901 167 QDNLG 171 (171)
Q Consensus 167 ~~~~g 171 (171)
.++.|
T Consensus 150 ~~~~~ 154 (485)
T TIGR00711 150 IENYH 154 (485)
T ss_pred ccCcC
Confidence 77543
No 23
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.51 E-value=2.6e-13 Score=110.09 Aligned_cols=137 Identities=12% Similarity=0.057 Sum_probs=114.9
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...++.|.. +++.++.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++......+
T Consensus 19 ~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~-------- 88 (365)
T TIGR00900 19 QVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPFVALLG-------- 88 (365)
T ss_pred HHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 345566665 6899999999999999999999999999999998 999999999999888887776654211
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+.+++++.+.+++.+...|...++++|.++++ +|++.++++....++|.++++.+.+++
T Consensus 89 ----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~g~~l~~~l 151 (365)
T TIGR00900 89 ----------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE-------QLTQANSLSQAVRSLFYIVGPGIGGLM 151 (365)
T ss_pred ----------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH-------HHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 114677888999999999999999999999988542 378899999999999999999988887
Q ss_pred cccc
Q 045901 167 QDNL 170 (171)
Q Consensus 167 ~~~~ 170 (171)
.+..
T Consensus 152 ~~~~ 155 (365)
T TIGR00900 152 YATL 155 (365)
T ss_pred HHHh
Confidence 6543
No 24
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.51 E-value=4.8e-13 Score=107.50 Aligned_cols=133 Identities=20% Similarity=0.331 Sum_probs=115.0
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
.....++.|. +++|.++.+.+.+.........++.++.|+++||+ ||||.+.++.++..++.+++....
T Consensus 17 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~~~~~--------- 85 (352)
T cd06174 17 LLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLLAFAS--------- 85 (352)
T ss_pred hhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHhc---------
Confidence 3445556665 46799999999999999999999999999999998 999999999999999988776643
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
+.+.+++.+.+.+++.+...+...++..|.++++ +|++.+++.+...++|..+++.+.+
T Consensus 86 --------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~ 144 (352)
T cd06174 86 --------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK-------ERGRALGLFSAGFGLGALLGPLLGG 144 (352)
T ss_pred --------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc-------chhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999998652 2688899999999999999999988
Q ss_pred hhccc
Q 045901 165 YIQDN 169 (171)
Q Consensus 165 ~i~~~ 169 (171)
++.++
T Consensus 145 ~~~~~ 149 (352)
T cd06174 145 LLAES 149 (352)
T ss_pred HHHHH
Confidence 88764
No 25
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.51 E-value=2.4e-13 Score=112.95 Aligned_cols=132 Identities=11% Similarity=0.022 Sum_probs=112.5
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
.+.+.+|.|++ ++|.|+.+++.+.+.+..+..++.++.|+++||+ ||||.+.++.++..++...+.+++
T Consensus 24 ~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~~~~~~~~~~--------- 92 (381)
T PRK03633 24 VLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAAGCAGLGLMV--------- 92 (381)
T ss_pred hHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc---------
Confidence 34566777776 7899999999999999999999999999999998 999999999999999988776643
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
+.+.+++.+++.|++.+...|...+.+.|..++ ++|++.++++....++|..+++.+.+
T Consensus 93 --------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~g~~~~~ 151 (381)
T PRK03633 93 --------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS-------RNRGRLLAAYMMVYYLGTVLGQLLVS 151 (381)
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467788899999999999888887777776542 13688889999999999999999888
Q ss_pred hhcc
Q 045901 165 YIQD 168 (171)
Q Consensus 165 ~i~~ 168 (171)
++.+
T Consensus 152 ~l~~ 155 (381)
T PRK03633 152 KVST 155 (381)
T ss_pred cccc
Confidence 8765
No 26
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.50 E-value=3.9e-13 Score=112.54 Aligned_cols=127 Identities=14% Similarity=0.152 Sum_probs=109.9
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.+.+.+++|+|+.+.+.+.+.+..+..++.++.|+++||+ ||||++..+..+..++.+++.+++
T Consensus 32 lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~--------------- 95 (393)
T PRK09705 32 LPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYP--------------- 95 (393)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCc---------------
Confidence 3456679999999999999999999999999999999998 999999999999999999888764
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
+.+.+++++++.|+|.|...+..+..+.|.++ + +|+++.+.+..+.++|..+++.+.+++.++
T Consensus 96 --------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~-------~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~ 158 (393)
T PRK09705 96 --------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q-------RTPLVMGLWSAALMGGGGLGAAITPWLVQH 158 (393)
T ss_pred --------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-c-------cchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45678889999999999999999988888764 1 257888888888888888888888876653
No 27
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.50 E-value=3.7e-13 Score=110.61 Aligned_cols=128 Identities=16% Similarity=0.127 Sum_probs=111.7
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+.+.+++|.|+.+.+.+.+.+..+..++.++.|+++||+ ||||.+.++.++..++.+++..++
T Consensus 29 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~---------------- 91 (385)
T TIGR00710 29 PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFALSSLGLALSN---------------- 91 (385)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHc----------------
Confidence 446678999999999999999999999999999999998 999999999999999988776653
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+++.+++.+++.+...+...+++.|.++++ +|++.+++.+...++|..+++.+.+++.+..
T Consensus 92 -------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 156 (385)
T TIGR00710 92 -------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGE-------ELSRIYSILMPVLALAPAVAPLLGGYILVWL 156 (385)
T ss_pred -------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4567888899999999999999999999988632 3788999999999999999999888876643
No 28
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.50 E-value=1.6e-13 Score=111.75 Aligned_cols=129 Identities=14% Similarity=0.162 Sum_probs=110.3
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQM 88 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~ 88 (171)
...+++.+++|+++.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------- 81 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------- 81 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh-------------
Confidence 445678889999999999999999999999999999999998 999999999999999988877654
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh-HHHHhhc
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA-TFIVYIQ 167 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~-~~~~~i~ 167 (171)
+.+.+++.+++.+++.|...+...+++.|.++++ +|++..++.....++|..+++ .+...+.
T Consensus 82 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 144 (379)
T TIGR00881 82 ----------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS-------ERGTWVSFWNCSHNVGGGLLPPLVLFGIA 144 (379)
T ss_pred ----------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh-------hheeeEeehhccchhHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999998642 267788888888889988888 4555444
Q ss_pred c
Q 045901 168 D 168 (171)
Q Consensus 168 ~ 168 (171)
+
T Consensus 145 ~ 145 (379)
T TIGR00881 145 E 145 (379)
T ss_pred h
Confidence 3
No 29
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.49 E-value=8.2e-13 Score=111.66 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=111.7
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
++...+.+.+++++|+++.+++.+.+.+..+..++.++.|++.||+ ||||++.++.++..++.+++..+..
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~~~~-------- 90 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWPAAE-------- 90 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 3444556777889999999999999999999999999999999998 9999999999999999887654431
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
..+++.+++++++.|+|.|...+..++++.+..+++ ++++..++.....++|..+++.+.+
T Consensus 91 ------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 91 ------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPES-------TATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred ------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 115678889999999999999999999999875432 2455677777788899888888777
Q ss_pred hhc
Q 045901 165 YIQ 167 (171)
Q Consensus 165 ~i~ 167 (171)
.+.
T Consensus 152 ~l~ 154 (410)
T TIGR00885 152 QLI 154 (410)
T ss_pred HHH
Confidence 663
No 30
>TIGR00895 2A0115 benzoate transport.
Probab=99.48 E-value=5e-13 Score=109.64 Aligned_cols=132 Identities=11% Similarity=0.080 Sum_probs=112.8
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
....+++.+++|+++.+++.+.+.......++.++.|+++||+ |||+.+..+.++..++.+++....
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------ 103 (398)
T TIGR00895 37 GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVFTLLCALAT------------ 103 (398)
T ss_pred HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHcc------------
Confidence 3445666778999999999999999999999999999999998 999999999999998887765542
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+.+.+++.+++.+++.+...+...++++|.++++ +|++..+++....++|..+++.+.+++.
T Consensus 104 -----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (398)
T TIGR00895 104 -----------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR-------FRGTAVGLMFCGYPIGAAVGGFLAGWLI 165 (398)
T ss_pred -----------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHH-------hhchhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 4566788899999999999999999999987532 3688888988999999999999988887
Q ss_pred ccc
Q 045901 168 DNL 170 (171)
Q Consensus 168 ~~~ 170 (171)
++.
T Consensus 166 ~~~ 168 (398)
T TIGR00895 166 PVF 168 (398)
T ss_pred hcc
Confidence 654
No 31
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.48 E-value=6.9e-13 Score=107.93 Aligned_cols=129 Identities=19% Similarity=0.190 Sum_probs=107.3
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...+.+++.+++|+|+.+.+.+.+.+.++..++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~----------- 89 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD----------- 89 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-----------
Confidence 34567888889999999999999999999999999999999998 999999999999999998887764
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+++++.+.|++.|...+...+...|.+++ +|+++.+++....++|.++++.+.+.+
T Consensus 90 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (377)
T TIGR00890 90 ------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD--------KRGLASGIIIGGYGLGSFILSPLITSV 149 (377)
T ss_pred ------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc--------ccHHHHHHHHHhcchhHhHHHHHHHHH
Confidence 567788888999999998877777777776632 257788888888888887655555444
Q ss_pred c
Q 045901 167 Q 167 (171)
Q Consensus 167 ~ 167 (171)
.
T Consensus 150 ~ 150 (377)
T TIGR00890 150 I 150 (377)
T ss_pred H
Confidence 3
No 32
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.48 E-value=9e-13 Score=109.83 Aligned_cols=129 Identities=15% Similarity=0.099 Sum_probs=110.2
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
..+.+.+++|+++.+.+.+.+.+.++..++.++.|+++||+ ||||.+..+.++..++.+++.++.
T Consensus 37 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-------------- 101 (406)
T PRK11551 37 AAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGLFSLATAQAW-------------- 101 (406)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHhc--------------
Confidence 33456678999999999999999999999999999999998 999999999999888877665543
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
+.+.+++.+++.|++.+...+...+++.|.++++ +|++..++++...++|.++++.+...+.+.
T Consensus 102 ---------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (406)
T PRK11551 102 ---------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR-------LRGTAVSLMYCGVPFGGALASVIGVLAAGD 165 (406)
T ss_pred ---------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 4567888899999999999999999999988532 378899999999999999998887766554
No 33
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.48 E-value=7.1e-13 Score=119.52 Aligned_cols=129 Identities=13% Similarity=0.059 Sum_probs=110.8
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...+.+.+.+++|+++.+.+.+.+++.++..++.+++|+++||+ |||+.+++++++..++.+++.++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44566777789999999999999999999999999999999998 999999999999999988777654
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+++++++.|+|.|+..|....+++|.+++ +.|++.+++......+|.++++.+..++
T Consensus 254 ------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~-------~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 254 ------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ-------EKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999999999999999998853 2378888888888888888887655444
No 34
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.47 E-value=9.7e-13 Score=109.85 Aligned_cols=133 Identities=11% Similarity=0.036 Sum_probs=103.3
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.....+.+++++|+|+.+.+.+.+.+..+..++.++.|+++||+ |||+++..+......+.+ .....
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~----------- 76 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP----------- 76 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh-----------
Confidence 34455666779999999999999999999999999999999998 999987666555544432 22221
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
.+...+++.|++.|+|.|.. ++.....+|.+++ ++|+++.++...+.++|.++++.+.+++
T Consensus 77 -----------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~-------~~r~~a~~~~~~~~~lG~~l~~~~~~~l 137 (368)
T TIGR00903 77 -----------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIRE-------ERRDLVISLLSFAMYLGIIFALAAGLKI 137 (368)
T ss_pred -----------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 14678999999999999864 4555556787753 2378999999999999999999999988
Q ss_pred ccccC
Q 045901 167 QDNLG 171 (171)
Q Consensus 167 ~~~~g 171 (171)
.++.|
T Consensus 138 ~~~~g 142 (368)
T TIGR00903 138 YTAGG 142 (368)
T ss_pred HHccc
Confidence 76543
No 35
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.47 E-value=1.2e-12 Score=110.88 Aligned_cols=129 Identities=10% Similarity=0.104 Sum_probs=110.7
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+.+.+++|+|+.+++.+.+.+.++..++.+++|+++||+ |||+.+.++.++..++.+++.++.
T Consensus 47 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~---------------- 109 (434)
T PRK11663 47 PEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGFSS---------------- 109 (434)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHHHh----------------
Confidence 344457999999999999999999999999999999998 999999999999999988776653
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNLG 171 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~g 171 (171)
+.+.+++.+++.+++.|...+.....+.|.++++ +|++..++++...++|..+++.+.+++.+..|
T Consensus 110 -------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~-------~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 110 -------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT-------ERGGWWAIWNTAHNVGGALIPLVVGAIALHYG 175 (434)
T ss_pred -------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 4566777788899999988899999999988532 37889999999999999999998888876543
No 36
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.47 E-value=1e-12 Score=112.25 Aligned_cols=132 Identities=14% Similarity=0.140 Sum_probs=114.4
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
..+..++.+++|+++.+++.+.+.+.++..++.+++|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 40 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 106 (496)
T PRK03893 40 TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVLFSVGTLACGFAP------------ 106 (496)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 3445667789999999999999999999999999999999998 999999999999999988877653
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+.+.+++.+.+.|++.+...+...+++.|.+++ ++|++..++++...++|.++++.+.+++.
T Consensus 107 -----------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 107 -----------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK-------HLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467788899999999999999999999998853 23788888888999999999999888876
Q ss_pred ccc
Q 045901 168 DNL 170 (171)
Q Consensus 168 ~~~ 170 (171)
++.
T Consensus 169 ~~~ 171 (496)
T PRK03893 169 PVW 171 (496)
T ss_pred ccC
Confidence 644
No 37
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.47 E-value=9.5e-13 Score=107.76 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=105.6
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
...+.+|.++++++|+|+.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 19 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~~~~~~~--------- 88 (366)
T TIGR00886 19 AFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCLWAGLAV--------- 88 (366)
T ss_pred HhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHh---------
Confidence 3444555578899999999999999999999999999999999998 999999999999999988776653
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
.+.+.+++++++.|++.+.. +...++++|.++++ +|++..+++....++|..+++.+.+
T Consensus 89 -------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 89 -------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKK-------IQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred -------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHh-------hhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 03567788899999986654 56788889987542 2677888877777777777766655
Q ss_pred hhc
Q 045901 165 YIQ 167 (171)
Q Consensus 165 ~i~ 167 (171)
.+.
T Consensus 148 ~l~ 150 (366)
T TIGR00886 148 PII 150 (366)
T ss_pred HHH
Confidence 543
No 38
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.47 E-value=8.3e-13 Score=108.79 Aligned_cols=132 Identities=14% Similarity=0.153 Sum_probs=112.8
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+.++.+. +++|+++.+++.+.+.+.....++.+++|+++||+ |||+.+..+.++..++..++..+.
T Consensus 11 ~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~----------- 77 (377)
T PRK11102 11 LPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ----------- 77 (377)
T ss_pred hccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 35566666 47999999999999999999999999999999998 999999999999999988776643
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+++.+++.+++.+...+...+++.|.++++ +|++..++.+...++|..+++.+.+++
T Consensus 78 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~l 138 (377)
T PRK11102 78 ------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE-------EFSRMMSFVTLVMTIAPLLAPIIGGWL 138 (377)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566788889999999999999999999987532 378889999999999999999988887
Q ss_pred cccc
Q 045901 167 QDNL 170 (171)
Q Consensus 167 ~~~~ 170 (171)
.+..
T Consensus 139 ~~~~ 142 (377)
T PRK11102 139 LVWF 142 (377)
T ss_pred HHHc
Confidence 6643
No 39
>PRK10504 putative transporter; Provisional
Probab=99.47 E-value=6.4e-13 Score=113.08 Aligned_cols=135 Identities=11% Similarity=0.082 Sum_probs=113.4
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+.+.+.+|.|.+ ++|.++.+.+.+.+.+.++..++.++.|+++||+ ||||.+..+.++..++.+++.++.
T Consensus 27 ~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~-------- 96 (471)
T PRK10504 27 TIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTLGSLFCALSG-------- 96 (471)
T ss_pred HHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 344556666664 7999999999999999999999999999999998 999999999999988887665432
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+.+.+++++++.|+|.|...|.....+.|.+++ +++.+.+++.....++|..+++.+.
T Consensus 97 ---------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~g~~~~ 154 (471)
T PRK10504 97 ---------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR-------EQYMAAMTFVTLPGQVGPLLGPALG 154 (471)
T ss_pred ---------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 356678889999999999999999999998742 2378889999999999999999999
Q ss_pred Hhhcccc
Q 045901 164 VYIQDNL 170 (171)
Q Consensus 164 ~~i~~~~ 170 (171)
+++.++.
T Consensus 155 g~l~~~~ 161 (471)
T PRK10504 155 GLLVEYA 161 (471)
T ss_pred HHHHhhc
Confidence 8887654
No 40
>PRK11043 putative transporter; Provisional
Probab=99.46 E-value=1.1e-12 Score=109.50 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=105.9
Q ss_pred hhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCC
Q 045901 14 LCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCE 93 (171)
Q Consensus 14 l~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
+++++|.++.+++.+.+.+..+..++.++.|+++||+ ||||.+..+.++..++.+++.++.
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------ 92 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE------------------ 92 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 6679999999999999999999999999999999998 999999999999998887776543
Q ss_pred CccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Q 045901 94 SATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNLG 171 (171)
Q Consensus 94 ~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~g 171 (171)
+.+.+++.+.+.|++.+...+...+++.|.++++ ++.+.++......++|..+++.+.+++.+..|
T Consensus 93 -----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 93 -----SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ-------KANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred -----CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4567788889999998888888888888887532 25666777777788888899988888876543
No 41
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.46 E-value=8.5e-13 Score=109.83 Aligned_cols=128 Identities=9% Similarity=0.153 Sum_probs=108.8
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+.+.+++|.++.+.+.+.+.+..+..++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 27 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~l~~~~~---------------- 89 (382)
T PRK10091 27 TELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGNAMFTLSS---------------- 89 (382)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHHHhC----------------
Confidence 456678999999999999999999999999999999998 999999999999999998776653
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+++.+++.|++.|...+.....+.|.++++ +|++..+++....++|..+++.+.+++.+..
T Consensus 90 -------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 154 (382)
T PRK10091 90 -------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG-------KVTAAVAGMVSGMTVANLLGIPLGTYLSQEF 154 (382)
T ss_pred -------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH-------HhhHHHHHHHHHHHHHHHHhccHHHHHhhhc
Confidence 4677889999999999988888888888876431 2567788888888899999888888776644
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.45 E-value=1.6e-12 Score=109.72 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=106.9
Q ss_pred hhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCC
Q 045901 14 LCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCE 93 (171)
Q Consensus 14 l~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
+.++++.+..+++..++.+..+..++.++.|+++||+ ||||++..+.++..++.+++..++
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 4568999999999999999999999999999999998 999999999999999988776653
Q ss_pred CccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 94 SATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 94 ~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+...+++++++.|++.+...+.....+.|.++++ ++.+..+++....++|..+++.+++++.+..
T Consensus 103 -----~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~ 167 (413)
T PRK15403 103 -----SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQT-------KGIKLMAIITSIVLVAPIIGPLSGAALMHFV 167 (413)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4677889999999998877677777788877532 2677788888899999999998888877643
No 43
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.44 E-value=1.5e-12 Score=109.19 Aligned_cols=122 Identities=19% Similarity=0.199 Sum_probs=105.9
Q ss_pred HhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCC
Q 045901 13 YLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGC 92 (171)
Q Consensus 13 yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~ 92 (171)
.+..+++.++.+.+++.+.+.....+..+++|+++||+ ||||++.++.++..++.+++..+.
T Consensus 28 ~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~~~~~~~----------------- 89 (393)
T PRK11195 28 ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCLLMLFGI----------------- 89 (393)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHHHHHHHH-----------------
Confidence 34568899999999999999999999999999999998 999999999999998887665432
Q ss_pred CCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 93 ESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 93 ~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
+ .++.++++|++.+...|...+++.|.++++ +|.++.++.....++|.++|+.+++++.+
T Consensus 90 ------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~-------~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 90 ------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGE-------KLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred ------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 256778999999999999999999998642 47899999999999999999999888765
No 44
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.44 E-value=1.7e-12 Score=106.40 Aligned_cols=138 Identities=14% Similarity=0.123 Sum_probs=101.9
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHH-HHHHHHHHHHHHHHhhhcCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGF-GCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~-~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
....+.+++|+++++|.|+.+.+.+.+.+.+...+..++.|+++||+ ||||.+.+ +.++..++.+++..++
T Consensus 14 ~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~------- 85 (375)
T TIGR00899 14 ALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFAWNR------- 85 (375)
T ss_pred HHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHhcc-------
Confidence 34567888999999999999999999999999999999999999998 99887654 5555555655554432
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
+++.+++.+.+.+.+.+...|...++..|..++++ +.+....++.....++|..+++.+
T Consensus 86 ----------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~ig~~~ 144 (375)
T TIGR00899 86 ----------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG-----REAVMFSSVMRAQISLAWVIGPPL 144 (375)
T ss_pred ----------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc-----hhhHHHHHHHHHHHhHHHHHhhhH
Confidence 45566666777777777777777777777653211 112233566677788999999998
Q ss_pred HHhhcccc
Q 045901 163 IVYIQDNL 170 (171)
Q Consensus 163 ~~~i~~~~ 170 (171)
.+++.+..
T Consensus 145 ~~~l~~~~ 152 (375)
T TIGR00899 145 AFWLALGF 152 (375)
T ss_pred HHHHHHhc
Confidence 88887644
No 45
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.44 E-value=2.6e-12 Score=106.80 Aligned_cols=128 Identities=15% Similarity=0.147 Sum_probs=108.1
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+.+.+++|.|+.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++..+.
T Consensus 27 p~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~~---------------- 89 (392)
T PRK10473 27 PRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLAE---------------- 89 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHhC----------------
Confidence 445578999999999999999999999999999999998 999999999999999987776543
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+...+++++.+.+++.+...+...+++.|.++++ +|.+..++.+...++|..+++.+.+++.+..
T Consensus 90 -------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~ 154 (392)
T PRK10473 90 -------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR-------RRAKVLSLLNGITCIIPVLAPVLGHLIMLKF 154 (392)
T ss_pred -------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3556778889999999998898999999987532 3788888888899999999998888776543
No 46
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.42 E-value=3.7e-12 Score=104.62 Aligned_cols=129 Identities=14% Similarity=0.179 Sum_probs=105.6
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...+.+.+.+++|+|+.+++.+.+.+..+..++.++.|+++||+ ||||.+.++.++..++.+.. .+.
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~----------- 85 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP----------- 85 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc-----------
Confidence 33445566779999999999999999999999999999999998 99999999999888877655 221
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+++.+++.++|.+...+..+....|.+++ +|++..+++....++|..+++.+.+++
T Consensus 86 ------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 86 ------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ--------RVGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc--------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999999999888888888776531 267888888889999999988877776
Q ss_pred cc
Q 045901 167 QD 168 (171)
Q Consensus 167 ~~ 168 (171)
.+
T Consensus 146 ~~ 147 (355)
T TIGR00896 146 AQ 147 (355)
T ss_pred HH
Confidence 54
No 47
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.41 E-value=5.2e-12 Score=106.87 Aligned_cols=138 Identities=17% Similarity=0.144 Sum_probs=100.7
Q ss_pred cHHHHHHHhhHhhC---CChHHHHHH---HHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC
Q 045901 6 LMPNMILYLCREYN---METTAATNV---LFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 6 v~~~l~~yl~~~lg---~s~~~a~~~---~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~ 79 (171)
+.+.+.+++.++++ .++.+.+.. .....++..++.+++|+++||+ ||||++.++.++..++.+++.++..+..
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 118 (432)
T PRK10406 40 VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSLVIACLPGYET 118 (432)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHhhcCCchh
Confidence 35566678888874 555544333 3344455558899999999998 9999999999999999988876541100
Q ss_pred CCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 045901 80 EKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS 159 (171)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~ 159 (171)
. ...+...+++.|++.|+|.|+..|...++++|..+++ +|+++.++.+...+.|.+++
T Consensus 119 ~---------------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~-------~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 119 I---------------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEG-------RKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred H---------------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCC-------cccHHHHHHHHHHHHHHHHH
Confidence 0 0113456888999999999999999999999988643 25777788778888888887
Q ss_pred hHHHHhh
Q 045901 160 ATFIVYI 166 (171)
Q Consensus 160 ~~~~~~i 166 (171)
+.+...+
T Consensus 177 ~~~~~~~ 183 (432)
T PRK10406 177 LLVVVVL 183 (432)
T ss_pred HHHHHHH
Confidence 7654443
No 48
>PRK10133 L-fucose transporter; Provisional
Probab=99.41 E-value=5.9e-12 Score=107.30 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=103.7
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQM 88 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~ 88 (171)
.+.+.+++++|.|+.+++.+.+.+..+..++.++.|++.||+ ||||++.++.+++.++.+++..+..
T Consensus 47 ~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~~l~~~~~~------------ 113 (438)
T PRK10133 47 ILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWPAAE------------ 113 (438)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 344556889999999999999999999999999999999998 9999999999999999987643221
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
..+++.++++++++|+|.|...+..+++++|..++ + ++....+.+.....+|..+++.+.+.+
T Consensus 114 --------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~-~------~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 114 --------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-S------SGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred --------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCh-h------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11567889999999999999999999999985322 1 133345566667778888877765543
No 49
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=8.5e-12 Score=104.21 Aligned_cols=126 Identities=14% Similarity=0.161 Sum_probs=105.8
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.+.+.+++|+|+.+.+.+.+.+.++..++.+++|+++||+ ||||.+..+.++..++.+++.+++
T Consensus 30 ~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~l~~~~~--------------- 93 (394)
T PRK03699 30 MGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALMILAVAGLMFSH--------------- 93 (394)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHcc---------------
Confidence 3445678999999999999999999999999999999998 999999999999999988776643
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+.+.+++.+.+.+++.|...+...+.+.|.++++ +|++..+..+...++|..+++.+.+++.
T Consensus 94 --------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 94 --------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGK-------QRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred --------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccc-------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888899999999999999999999988532 2567777777777888888887777654
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.40 E-value=5.1e-12 Score=105.12 Aligned_cols=128 Identities=20% Similarity=0.263 Sum_probs=106.2
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+++.+++|.|+.+.+.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++..+.
T Consensus 32 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~---------------- 94 (394)
T PRK11652 32 ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFILGTLVALFAH---------------- 94 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHc----------------
Confidence 445678999999999999999999999999999999998 999999999999999888776543
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+++.+.+.|++.+...+....+..|.++++ ++++...+...+..++.++++.+.+++.+..
T Consensus 95 -------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 159 (394)
T PRK11652 95 -------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT-------QLRHANSLLNMGILVSPLLAPLIGGLLTTLF 159 (394)
T ss_pred -------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4667888899999999888777777777876431 2667777777888888888888888776643
No 51
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.39 E-value=4.5e-12 Score=105.99 Aligned_cols=116 Identities=18% Similarity=0.231 Sum_probs=100.2
Q ss_pred CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchh
Q 045901 20 METTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQ 99 (171)
Q Consensus 20 ~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (171)
.+..+.+.+.+.+.++..++.++.|+++||+ ||||.+.++.++..++.+++..... ..+
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~--------------------~~~ 126 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF--------------------ALS 126 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc--------------------ccc
Confidence 3389999999999999999999999999998 9999999999999999887765431 113
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 100 LMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 100 ~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
.+.+++++++.|+|.|...+...++++|.++++ +|++..++++...++|.++++.+.
T Consensus 127 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 127 VEMLIVGRVLLGIGVGIASALVPMYLSEIAPKA-------LRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHccCChh-------hhhhhhhHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999999999988643 268888898999999999999877
No 52
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.39 E-value=8.5e-12 Score=106.08 Aligned_cols=129 Identities=10% Similarity=0.039 Sum_probs=103.0
Q ss_pred hCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhc-CCCCCCcccccccCCCCcc
Q 045901 18 YNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIF-PQEKPPVCDQMRSGCESAT 96 (171)
Q Consensus 18 lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~ 96 (171)
++.++.+.+.+.+.+.++..++.++.|+++||+ ||||++.++.++..++.+.+.++... +...+ ++
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~------------~~ 116 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGP------------DN 116 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccc------------cc
Confidence 389999999999999999999999999999998 99999999999999988777654210 00000 01
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 97 ASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 97 ~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
......++++|++.|++.|...|...++++|.++++ +|+++.+++.....+|.++++.+...+
T Consensus 117 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~-------~rg~~~~~~~~~~~~G~~~~~~~~~~~ 179 (479)
T PRK10077 117 TGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH-------IRGKLVSFNQFAIIFGQLVVYFVNYFI 179 (479)
T ss_pred hhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh-------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123466789999999999999999999999998642 368888888888889988887655443
No 53
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.39 E-value=7.8e-12 Score=104.81 Aligned_cols=139 Identities=13% Similarity=0.234 Sum_probs=108.0
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+.....+++++ +++|.++.+++.+.+.+.....++.++.|+++||+ ||||.+..+.++..++.+++.... ..
T Consensus 30 ~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~-~~----- 101 (402)
T TIGR00897 30 GLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLWCVGHAAFIVFG-LG----- 101 (402)
T ss_pred hhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHh-cc-----
Confidence 34455677888 57899999999999999999999999999999998 999999999999998876553221 00
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHH-HHHhHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGS-MLSATF 162 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~-~i~~~~ 162 (171)
..+.+.+++.+.+.|+|.+...+...+.+.|..++ ++|+++.+++....++|. ++++.+
T Consensus 102 -------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 102 -------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ-------DNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred -------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01355667778888988887777777777776643 237889999989999986 578887
Q ss_pred HHhhcccc
Q 045901 163 IVYIQDNL 170 (171)
Q Consensus 163 ~~~i~~~~ 170 (171)
.+++.+..
T Consensus 162 ~~~l~~~~ 169 (402)
T TIGR00897 162 SSYAIPAF 169 (402)
T ss_pred HHhccccc
Confidence 77776543
No 54
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.39 E-value=8e-12 Score=104.45 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=104.7
Q ss_pred hhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCC
Q 045901 14 LCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCE 93 (171)
Q Consensus 14 l~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
+.+++|.|+.+.+...+.+.++..++.++.|+++||+ ||||.+.++.++..++.+++..+.
T Consensus 39 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~------------------ 99 (406)
T PRK15402 39 VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ------------------ 99 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc------------------
Confidence 4578999999999999999999999999999999998 999999999999998887765543
Q ss_pred CccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 94 SATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 94 ~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+++.+.+.|++.+...+...+.+.|.++++ ++.+..++......++..+++.+.+++.++.
T Consensus 100 -----~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 100 -----SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA-------DAIKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred -----cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3566788899999999988888889999987542 2456667776777788888888888776643
No 55
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.37 E-value=1.9e-12 Score=110.68 Aligned_cols=131 Identities=12% Similarity=0.075 Sum_probs=107.5
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.+.+.+++|+++.+.+++.+.+..+..++.+++|+++||+ ||||.+.++.++..++.+++..... ..
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~--~~---------- 118 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG--SG---------- 118 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--cc----------
Confidence 4556789999999999999999999999999999999998 9999999999988888776654310 00
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
..+...+++.+.+.|++.|...|.....++|.+++++ |+++.+++....++|.++++.+..++.
T Consensus 119 ------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-------rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 119 ------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK-------RGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred ------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc-------eeeeEEeeecccchhhhHHHHHHHHHH
Confidence 1256788889999999999999999999999987532 577888888888888888877665543
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.36 E-value=1.2e-11 Score=102.71 Aligned_cols=133 Identities=18% Similarity=0.124 Sum_probs=104.9
Q ss_pred eccHHHHHHHhhHhhCCChHH-----HHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcC
Q 045901 4 NGLMPNMILYLCREYNMETTA-----ATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFP 78 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~-----a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~ 78 (171)
....+.++.|++ ++|.+..+ ++.+.+.+.+...++.++.|+++||+ ||||.+..+.++..++.+++....
T Consensus 31 ~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~--- 105 (408)
T PRK09874 31 SLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALGMGIVMVLMGLAQ--- 105 (408)
T ss_pred HHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHHHHHHHHHHHHHh---
Confidence 345567778875 68888655 47888889999999999999999998 999999999999998887765543
Q ss_pred CCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 045901 79 QEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSML 158 (171)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i 158 (171)
+.+.+++.+.+.+++.+ ..+...+.+.|..+++ +|++..++.....++|.++
T Consensus 106 --------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 157 (408)
T PRK09874 106 --------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRN-------KSGWALGTLSTGGVSGALL 157 (408)
T ss_pred --------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHh-------hhhHHHHHHHHHHHHHHHH
Confidence 46677888888888755 4577777778876432 3678888888889999999
Q ss_pred HhHHHHhhccc
Q 045901 159 SATFIVYIQDN 169 (171)
Q Consensus 159 ~~~~~~~i~~~ 169 (171)
++.+.+++.+.
T Consensus 158 ~~~~~~~l~~~ 168 (408)
T PRK09874 158 GPLAGGLLADS 168 (408)
T ss_pred HHHHHHHHHHH
Confidence 99888887654
No 57
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.36 E-value=1.3e-11 Score=105.92 Aligned_cols=129 Identities=11% Similarity=0.041 Sum_probs=116.2
Q ss_pred cHHHHHHHhhHhhCCChHH-HHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 6 LMPNMILYLCREYNMETTA-ATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~-a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
..++..+|+.+++|+++.+ .+.+..+|..+..++.+++|+++||+ |.||.+.++.+...+..+++.++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 3566778999999999999 99999999999999999999999998 999999999999999999888764
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
+...+.+.+++.|++.|... +...+++..+++ ++|+++.+++..+.++|.++++.+++
T Consensus 114 --------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~-------kER~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 114 --------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP-------SRYQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999998 999999999863 23788999999999999999998888
Q ss_pred hh
Q 045901 165 YI 166 (171)
Q Consensus 165 ~i 166 (171)
++
T Consensus 172 ll 173 (511)
T TIGR00806 172 LL 173 (511)
T ss_pred HH
Confidence 73
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.36 E-value=7.2e-12 Score=107.52 Aligned_cols=124 Identities=15% Similarity=0.185 Sum_probs=105.6
Q ss_pred HhhHhhCCC---hHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 13 YLCREYNME---TTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 13 yl~~~lg~s---~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
-+.++++++ +.+.+.+.+.+.++..++.++.|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~-------------- 178 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP-------------- 178 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--------------
Confidence 345688998 99999999999999999999999999998 999999999999999988776653
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+++.+++.+++.|++.|...+....++.|.++++ +|++...+......+|.++++.+..++.
T Consensus 179 ---------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 240 (505)
T TIGR00898 179 ---------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK-------QRAIVGTLIQVFFSLGLVLLPLVAYFIP 240 (505)
T ss_pred ---------cHHHHHHHHHHHHhhccchHHHHHHHhheecChh-------hhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4677889999999999999999999999998643 2677777777788888888887665543
No 59
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.34 E-value=1.4e-11 Score=104.92 Aligned_cols=124 Identities=11% Similarity=0.077 Sum_probs=108.1
Q ss_pred hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCcc
Q 045901 17 EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESAT 96 (171)
Q Consensus 17 ~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (171)
++++++.+.+.+.+.+..+..++.+++|+++||+ |||+.+.++.++..++.+++..+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999998 9999999999999988877654421
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 97 ASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 97 ~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
.+...+++.+++.|++.|...|....+++|.++++ +|+++.+++..+.++|.++++.+.+++.+.
T Consensus 129 -~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~ 193 (465)
T TIGR00894 129 -GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPK-------ERSRLLGMSTSGFQLGTFIFLPISGWLCES 193 (465)
T ss_pred -cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 13456888899999999999999999999987532 378999999999999999999999988765
No 60
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.33 E-value=3.4e-11 Score=99.27 Aligned_cols=136 Identities=11% Similarity=0.076 Sum_probs=105.1
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
+...++.|+++++|+++.+++.+.....++..++.++.|+++||+ ||||.+.++.++..+..+.+....
T Consensus 257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 325 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAIG---------- 325 (405)
T ss_pred hhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHhC----------
Confidence 445678899999999999999999999999999999999999997 999999988776543322221111
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
.+.+.+.++.++.+...+...+..++++.|.++++ +|++.+++.+...++|..+++.+.++
T Consensus 326 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~g~~~g~~~~g~ 386 (405)
T TIGR00891 326 ------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD-------QRAAGLGFTYQLGNLGGALAPIIGAL 386 (405)
T ss_pred ------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc-------hhHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 02344455556666666677778888888877532 37889999999999999999999999
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.|+.|
T Consensus 387 l~~~~g 392 (405)
T TIGR00891 387 LAQRLD 392 (405)
T ss_pred HHHhcc
Confidence 998754
No 61
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.32 E-value=4.1e-11 Score=97.47 Aligned_cols=134 Identities=13% Similarity=0.117 Sum_probs=106.1
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
...+.|. ++++.++.+++.+...+.....++.++.|+++||+ |||+.+.++.++..++.+++.....
T Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~----------- 292 (377)
T TIGR00890 226 GLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMAAMLFIPM----------- 292 (377)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHccc-----------
Confidence 3455564 56899999999999999999999999999999998 9999999999998888776654320
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
.....+.....+.+++.|...+..+++..|.++++ ++++.+++++...++|..+++.+.+++.
T Consensus 293 ----------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 293 ----------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPA-------NSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred ----------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhh-------hhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 01233445556778888888888888889987642 3688899999999999999999999887
Q ss_pred cccC
Q 045901 168 DNLG 171 (171)
Q Consensus 168 ~~~g 171 (171)
++.|
T Consensus 356 ~~~g 359 (377)
T TIGR00890 356 TEIG 359 (377)
T ss_pred hhhc
Confidence 7654
No 62
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.31 E-value=3.4e-11 Score=103.69 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=98.9
Q ss_pred ccHHHHHHHhhHhhCCChHH-HHH-----HHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcC
Q 045901 5 GLMPNMILYLCREYNMETTA-ATN-----VLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFP 78 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~-a~~-----~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~ 78 (171)
++.....+++.++++.+..+ .+. +.+....+..++.++.|+++||+ ||||++.++.++..++.+++.+++.+.
T Consensus 33 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a~~~~~~ 111 (490)
T PRK10642 33 GVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIGLIPSYA 111 (490)
T ss_pred HHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 34455666777777533321 111 23566678889999999999998 999999999999999999887764211
Q ss_pred CCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 045901 79 QEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSML 158 (171)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i 158 (171)
... ......+++.|++.|+|.|+..+...++++|.+++++ |+++..+...+.++|.++
T Consensus 112 ~~g---------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~-------Rg~~~~~~~~~~~~G~~l 169 (490)
T PRK10642 112 TIG---------------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK-------RGFMGSWLDFGSIAGFVL 169 (490)
T ss_pred HHH---------------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-------CcHHHHHHHHHHHHHHHH
Confidence 000 0011247889999999999999999999999986532 566777777777777777
Q ss_pred HhHHHHh
Q 045901 159 SATFIVY 165 (171)
Q Consensus 159 ~~~~~~~ 165 (171)
+..+...
T Consensus 170 g~~~~~~ 176 (490)
T PRK10642 170 GAGVVVL 176 (490)
T ss_pred HHHHHHH
Confidence 7654433
No 63
>PRK03699 putative transporter; Provisional
Probab=99.31 E-value=3.3e-11 Score=100.70 Aligned_cols=137 Identities=15% Similarity=0.102 Sum_probs=104.2
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
++++..++|.|+++++|+|+.+++.+.+.+..+..++.+++|+++||+ +|||.+.....+..+...++....
T Consensus 221 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~~~~------- 292 (394)
T PRK03699 221 QLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVLMYLFVNTD------- 292 (394)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHcC-------
Confidence 356677899999999999999999999999999999999999999998 999999888777666554443321
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
+.....+..++.|++.+...+...+...|+.+++ +++..++.+...++|..+++.+
T Consensus 293 ----------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~~~~~~g~~i~p~~ 348 (394)
T PRK03699 293 ----------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA--------SPKLVNFILTCGTIGTMLTFVV 348 (394)
T ss_pred ----------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--------CHHHHHHHHHhhhHHHHHHHHH
Confidence 1223444556677777777777777777765422 1334566777888999999999
Q ss_pred HHhhccccC
Q 045901 163 IVYIQDNLG 171 (171)
Q Consensus 163 ~~~i~~~~g 171 (171)
.+++.|..|
T Consensus 349 ~G~l~~~~g 357 (394)
T PRK03699 349 TSPIVAHFG 357 (394)
T ss_pred HHHHHHHhC
Confidence 999987654
No 64
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.31 E-value=6.7e-11 Score=95.02 Aligned_cols=136 Identities=22% Similarity=0.305 Sum_probs=116.8
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchh-HHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYP-MIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~-~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
......++.|+.+.+|.++.+.+.+.........++.++.|+++||+ |||+ .+.++.++..++.+.+....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~------- 263 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLLLALAP------- 263 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHhc-------
Confidence 34556778888877899999999999999999999999999999998 9999 99999999999887776543
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
+.+...+...+.+++.+...+....+..|..+++ +|++.++......++|..+++.+
T Consensus 264 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~i 320 (352)
T cd06174 264 ----------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPE-------ARGTASGLFNTFGSLGGALGPLL 320 (352)
T ss_pred ----------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888999999999999999999987542 37889999999999999999999
Q ss_pred HHhhcccc
Q 045901 163 IVYIQDNL 170 (171)
Q Consensus 163 ~~~i~~~~ 170 (171)
.+++.++.
T Consensus 321 ~g~l~~~~ 328 (352)
T cd06174 321 AGLLLDTG 328 (352)
T ss_pred HHHHhccc
Confidence 99987654
No 65
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.30 E-value=4e-11 Score=97.24 Aligned_cols=134 Identities=14% Similarity=0.104 Sum_probs=111.7
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
..+|.|.++.+|.++.+.+.+.....++..++.++.|++.||+ |||+.+..+.++..++..++....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------ 298 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLAILVVGLTP------------ 298 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHhhc------------
Confidence 5567777777999999999999999999999999999999998 999999988777777665554432
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+ +.+.+.+..++.+++.+...+...+++.|..++ +.|++.++++....++|..+++.+.+++.
T Consensus 299 ---------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 299 ---------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA-------ELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred ---------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 245567777889999999999999999998753 23789999999999999999999999999
Q ss_pred cccC
Q 045901 168 DNLG 171 (171)
Q Consensus 168 ~~~g 171 (171)
|+.|
T Consensus 362 ~~~g 365 (365)
T TIGR00900 362 DHLG 365 (365)
T ss_pred HHcC
Confidence 8876
No 66
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.30 E-value=6.5e-11 Score=102.13 Aligned_cols=123 Identities=16% Similarity=0.104 Sum_probs=102.1
Q ss_pred CCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccch
Q 045901 19 NMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATAS 98 (171)
Q Consensus 19 g~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (171)
+.++.+.+.+...+.++..++.++.|+++||+ |||+.+.++.++..++.+++.++... .+ ..
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~---~~--------------~~ 113 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGS---SP--------------KS 113 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCc---cc--------------ch
Confidence 46677888999999999999999999999998 99999999999999998877664310 00 11
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 99 QLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 99 ~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+...+++++++.|++.|+..+..+.+++|.++++ .|++..++.+....+|.++++.+..++
T Consensus 114 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~-------~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 114 VMATLCFWRFWLGVGIGGDYPLSAIITSEFATKK-------WRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh-------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567889999999999999999999999998643 378888999899999988888766544
No 67
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.29 E-value=8.6e-11 Score=101.01 Aligned_cols=124 Identities=6% Similarity=-0.013 Sum_probs=97.3
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.+++.+++|++..+.+.+...+..+..++.+++|+++||+ |||+.+..+.++..++.+++.++.
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~--------------- 122 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAPAVFCMSLVS--------------- 122 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhc---------------
Confidence 3467789999999999999999999999999999999998 999999999999998887776653
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+...+++.+++.|++.+... .....++|.++++ +|+++.++.....++|..+++.+.+.+
T Consensus 123 --------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~-------~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 123 --------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGK-------IVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred --------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChh-------heeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567778888898887654 3455678888542 367788887777777777776555544
No 68
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.29 E-value=8.3e-11 Score=98.31 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=97.5
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
..+++.|+++++|+++.+++.+.....+...++.+++|+++||+ ||||.+..+.+...+....+....
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~----------- 303 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYAGMLMAH----------- 303 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 45688899999999999999988887788888899999999998 999988877766555433332221
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+.+.+.+.+++.|...+..++...|..+++ ++++.+++....++|..+++.+.+++
T Consensus 304 ------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~--------~g~~~~~~~~~~~lg~~~g~~l~G~i 363 (393)
T PRK15011 304 ------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ--------AGSATTLYTNTSRVGWIIAGSLAGIV 363 (393)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334455556666666666666666677766421 46677777778899999999999998
Q ss_pred cccc
Q 045901 167 QDNL 170 (171)
Q Consensus 167 ~~~~ 170 (171)
.|..
T Consensus 364 ~~~~ 367 (393)
T PRK15011 364 AEIW 367 (393)
T ss_pred HHHh
Confidence 8754
No 69
>PRK15075 citrate-proton symporter; Provisional
Probab=99.28 E-value=7.6e-11 Score=99.82 Aligned_cols=137 Identities=14% Similarity=0.099 Sum_probs=96.7
Q ss_pred HHHHHHHhhHhhCCChHHHHHHH-HHHHH-----HHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 7 MPNMILYLCREYNMETTAATNVL-FIWTA-----ATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~-~~~~~-----~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
.....+.+.++++.++.+.+... +.... ...++.++.|+++||+ ||||.+..+.++..++.+++.+++..+.+
T Consensus 34 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~l~~~~~~~~~~ 112 (434)
T PRK15075 34 FGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVTLSIMASGTLLIAFVPGYATI 112 (434)
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 34556677889998887755443 22221 1235678999999998 99999999999999999888775411100
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
. ......++++|++.|++.|...++...+++|.+++++ |++..+++....++|..+++
T Consensus 113 ~---------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~-------rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 113 G---------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR-------KGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred H---------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc-------chHHHHHHHHHHHHHHHHHH
Confidence 0 0001246888999999999999999999999986532 67777777777777766666
Q ss_pred HHHHhh
Q 045901 161 TFIVYI 166 (171)
Q Consensus 161 ~~~~~i 166 (171)
.+.+.+
T Consensus 171 ~~g~~l 176 (434)
T PRK15075 171 LLGYLL 176 (434)
T ss_pred HHHHHH
Confidence 555544
No 70
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.28 E-value=6.7e-11 Score=101.12 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=101.3
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
+..++|.|+++++|+++.+++.+.....++..++.+++||++||+ ||||.+.++.++..++.+++....
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 362 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG---------- 362 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc----------
Confidence 456789999989999999999999999999999999999999997 999999888777666554332211
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
....+.....+.+.+....+..+..++.+.|.++++ ++++.+++++...++|..+++.+.++
T Consensus 363 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~g~~lgp~l~g~ 424 (496)
T PRK03893 363 -----------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE-------QRAAGLGFTYNVGALGGALAPILGAL 424 (496)
T ss_pred -----------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH-------HhhcccchhhhhhhHHHHHHHHHHHH
Confidence 012222223233322222234566777778877532 37889999999999999999999999
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.|+.|
T Consensus 425 l~~~~g 430 (496)
T PRK03893 425 IAQRLD 430 (496)
T ss_pred HhccCC
Confidence 988654
No 71
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.27 E-value=1e-11 Score=103.86 Aligned_cols=125 Identities=19% Similarity=0.159 Sum_probs=115.4
Q ss_pred hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCcc
Q 045901 17 EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESAT 96 (171)
Q Consensus 17 ~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (171)
+++-++.+.|++..++...+.+..++.|.+.||. |+|--+++|+.+..+.++++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 4677889999999999999999999999999997 999999999999999999998875
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Q 045901 97 ASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNLG 171 (171)
Q Consensus 97 ~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~g 171 (171)
+++.+.++|.++|+|.+...++..++++|.++++++ |+++.++......+|.++||-+++.++|..|
T Consensus 158 --sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e------r~~vmGialgfislG~lvgPpfGGilYe~~G 224 (464)
T KOG3764|consen 158 --SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE------RGSVMGIALGFISLGVLVGPPFGGILYEFAG 224 (464)
T ss_pred --hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh------hhHHHHHHHHHHhccceecCCcccchHhhcC
Confidence 578899999999999999999999999999987543 7899999999999999999999999998765
No 72
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.27 E-value=9.1e-11 Score=101.03 Aligned_cols=139 Identities=12% Similarity=0.132 Sum_probs=100.9
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
++|++..++|.|+++++|+++.++........++..++.+++|+++||+ |||+.+.++.++..++...+.....
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~----- 338 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFVLAIPAFILIN----- 338 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 4677888899999989999999888888888888999999999999998 9999998887755544333221110
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
..+...+++++++.+++.+...+...+...|.++++ .|++..++.|...++++.+++.
T Consensus 339 ---------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~-------~Rg~~~g~~~~~~~~~g~~~p~ 396 (490)
T PRK10642 339 ---------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTH-------IRYSALAAAFNISVLVAGLTPT 396 (490)
T ss_pred ---------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-------cchHHHHHHHHHHHHHHHHHHH
Confidence 012445667777777777666677777788887643 2677777755555666667777
Q ss_pred HHHhhcc
Q 045901 162 FIVYIQD 168 (171)
Q Consensus 162 ~~~~i~~ 168 (171)
+.+++.+
T Consensus 397 i~g~l~~ 403 (490)
T PRK10642 397 LAAWLVE 403 (490)
T ss_pred HHHHHHH
Confidence 7877655
No 73
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.26 E-value=1.2e-10 Score=95.45 Aligned_cols=133 Identities=12% Similarity=0.074 Sum_probs=101.6
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...++.|+++++|.++.+++.+.....+...++.+++|+++||+ ||||.+.++.++..+....+...+
T Consensus 219 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~----------- 286 (375)
T TIGR00899 219 IINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN----------- 286 (375)
T ss_pred HhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH-----------
Confidence 34578899889999999999988877777788888999999998 999999888776655544333321
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+.+.+...+.+++.|...+....+..|..++ ++++..++++...++|..+++.+.+++
T Consensus 287 ------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~~g~~~~g~~ 346 (375)
T TIGR00899 287 ------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG--------RAGAATTLYTNTGRVGWIIAGSVGGIL 346 (375)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--------hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556677888887777777777776532 145788888899999999999999988
Q ss_pred ccccC
Q 045901 167 QDNLG 171 (171)
Q Consensus 167 ~~~~g 171 (171)
.+..|
T Consensus 347 ~~~~g 351 (375)
T TIGR00899 347 AERWS 351 (375)
T ss_pred HHhcc
Confidence 77543
No 74
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.26 E-value=8.2e-11 Score=99.76 Aligned_cols=128 Identities=13% Similarity=0.107 Sum_probs=103.8
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
..+++++ +|+++.+.+.+.+.+..+..++.++.|+++||+ ||||.+.++.++..++.+++..... .
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~---~--------- 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPW---A--------- 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccc---c---------
Confidence 4456665 599999999999999999999999999999998 9999999999999988876654321 0
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
..+...+.+.+.+.+++.|...+.....+.|.++++ +|+++.++++...++|..+++.+.+.
T Consensus 115 -------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~-------~rg~~~~~~~~~~~~g~~~~~~l~~~ 176 (438)
T TIGR00712 115 -------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQS-------ERGTIVSIWNCAHNIGGGIPPLLVLL 176 (438)
T ss_pred -------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcc-------cchhHHHHHHHHHHhHhHHHHHHHHH
Confidence 013456677888999999999898889999988643 26889999888999998888766554
No 75
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.26 E-value=1e-11 Score=110.59 Aligned_cols=155 Identities=15% Similarity=0.221 Sum_probs=119.5
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC------
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ------ 79 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~------ 79 (171)
.......-++++++++..+.+.+.+.+.++..+..++.|+++||+ ||||.+.++.++..+|.+++++.+.+..
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 334444566678999999999999999999999999999999997 9999999999999999999877652110
Q ss_pred ----------CCCCccccc----------ccCCCCcc--chhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcch
Q 045901 80 ----------EKPPVCDQM----------RSGCESAT--ASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKN 137 (171)
Q Consensus 80 ----------~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~ 137 (171)
..++-|... ...|+..+ ...+..+++++++.|+|.+...+...+++.|.++++
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~----- 204 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSK----- 204 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcc-----
Confidence 000112100 01222211 113567789999999999999999999999988653
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 138 AGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 138 ~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
+|+.+.++++....+|.++|+.+++++.+
T Consensus 205 --~~~~~~~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 205 --NSPLYIGILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred --ccHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 26889999999999999999999888764
No 76
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.26 E-value=9.4e-11 Score=100.20 Aligned_cols=128 Identities=17% Similarity=0.113 Sum_probs=103.0
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
..+.+++|.++.+++.+.+.+.....++.+++|+++||+ ||||.++.+.++..++.+++.++.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345578999999999999999999999999999999998 999999999999999888776653
Q ss_pred CCCccchhHHHHHH-HHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 92 CESATASQLMLLYS-AFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 92 ~~~~~~~~~~~~~~-~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+++ .+++.|++.|...+...+.+.|.++ ++|+++.++.+...++|..+++.+.+++.+..
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~--------~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY--------RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH--------hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 2344443 4577899988766666677778762 13788999999999999999988888877654
Q ss_pred C
Q 045901 171 G 171 (171)
Q Consensus 171 g 171 (171)
|
T Consensus 171 g 171 (455)
T TIGR00892 171 G 171 (455)
T ss_pred C
Confidence 3
No 77
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.26 E-value=1.4e-10 Score=98.81 Aligned_cols=125 Identities=12% Similarity=0.060 Sum_probs=101.2
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQM 88 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~ 88 (171)
...+|++++ |+++.+.+.+.+.+.+...++.+++|+++||+ ||||.+.++.++..++.+++.++...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~----------- 116 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWA----------- 116 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhcc-----------
Confidence 345677877 99999999999999999999999999999998 99999999999999998877664310
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHH-HHHhH
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGS-MLSAT 161 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~-~i~~~ 161 (171)
..+.+.+++.+.+.|++.|...|.......|.++++ +|++..++++.+.++|. ++++.
T Consensus 117 --------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~l 175 (452)
T PRK11273 117 --------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK-------ERGGIVSVWNCAHNVGGGLPPLL 175 (452)
T ss_pred --------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChH-------HHHHHHHHHHHHHHhhhhHHHHH
Confidence 113556778888999999998888888888887532 37888888888888875 44554
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.25 E-value=8.1e-11 Score=109.84 Aligned_cols=133 Identities=10% Similarity=0.069 Sum_probs=107.2
Q ss_pred HHHHHhhHhhCCCh--HHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 9 NMILYLCREYNMET--TAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 9 ~l~~yl~~~lg~s~--~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+..++...++.+. ...+++.+++.+...++.+++|+++||+ ||||+++++.++..++.+++.++..
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~~~~~~~~~~~~---------- 99 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEVGLTLLIVLAYY---------- 99 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 34455555556554 3468888999999999999999999998 9999999999887777766555431
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
..+.+.+++.+++.|++.|...|...++++|.++++ +|+++++++....++|.++++.+++++
T Consensus 100 ----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 100 ----------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKE-------NLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred ----------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcc-------cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 114677889999999999999999999999998643 268899999999999999999988887
Q ss_pred ccc
Q 045901 167 QDN 169 (171)
Q Consensus 167 ~~~ 169 (171)
.+.
T Consensus 163 ~~~ 165 (1146)
T PRK08633 163 FES 165 (1146)
T ss_pred HHh
Confidence 653
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.25 E-value=8.6e-11 Score=98.04 Aligned_cols=140 Identities=9% Similarity=-0.038 Sum_probs=99.7
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
....++++.|+++++|+++.+.+.+.+.+.+...++.++.|+++||+ ||||.+..+.+...++..........+..
T Consensus 19 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~--- 94 (396)
T TIGR00882 19 SAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVLFAPFFIYVFGPLL--- 94 (396)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhhhHH---
Confidence 34567889999999999999999999999999999999999999998 99999998877776554432211100000
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
.......+.++.++.+++.+...|....+..|.-++ ++..+++.....++|.++++.+.
T Consensus 95 ------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~g~~~g~~~~ 153 (396)
T TIGR00882 95 ------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN---------SNFEYGKARMFGCVGWALCASIA 153 (396)
T ss_pred ------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh---------cccccchhhhhcccHHHHHHHHH
Confidence 000123345566778888888888887776663211 12345556667789999998888
Q ss_pred Hhhcc
Q 045901 164 VYIQD 168 (171)
Q Consensus 164 ~~i~~ 168 (171)
+.+.+
T Consensus 154 g~l~~ 158 (396)
T TIGR00882 154 GILFS 158 (396)
T ss_pred hhhhc
Confidence 87654
No 80
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.25 E-value=3.8e-11 Score=100.83 Aligned_cols=132 Identities=16% Similarity=0.076 Sum_probs=104.6
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+.+.++++.++.+++.+.+.+.....++.++.|+++||+ ||||.+.++.++..++.+++.......
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~~~~~~------------- 106 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLALNAFLP------------- 106 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHHHHHcC-------------
Confidence 344457788999999999999999999999999999998 999999999988888776654322110
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
..+.+.+++.+++.+++.+...++..+.+.|..+++ ++++...+.+...++|..+++.+.+++.+.
T Consensus 107 -----~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~ 172 (417)
T PRK10489 107 -----EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE-------NLMQAGAITMLTVRLGSVISPALGGLLIAA 172 (417)
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH-------HHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 114566777888889988888888888888876532 367788888889999999999988877653
No 81
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.24 E-value=1e-10 Score=100.89 Aligned_cols=138 Identities=14% Similarity=0.036 Sum_probs=109.8
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
+++....++.|+++.+|+|+.+++...........++.++.|++.||+ |||+.+..+.++..++.+++.....
T Consensus 275 ~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~~~~l~~~~~------ 347 (495)
T PRK14995 275 LVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALSFYGLAMTDF------ 347 (495)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHhcC------
Confidence 345566788999999999999999999999999999999999999998 9999999999988888766544320
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
..+.+......++.|+|.|...+.......+..+++ +++....++....++|..+|..+
T Consensus 348 --------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~lG~~~G~ai 406 (495)
T PRK14995 348 --------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE-------KAAAAGAIETMAYELGAGLGIAI 406 (495)
T ss_pred --------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH-------hcchHHHHHHHHHHHHHHHHHHH
Confidence 012334455677889999998888887777765432 25778888889999999999988
Q ss_pred HHhhcc
Q 045901 163 IVYIQD 168 (171)
Q Consensus 163 ~~~i~~ 168 (171)
.+.+.+
T Consensus 407 ~g~i~~ 412 (495)
T PRK14995 407 FGLLLS 412 (495)
T ss_pred HHHHHH
Confidence 887755
No 82
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.24 E-value=1.6e-10 Score=98.83 Aligned_cols=136 Identities=13% Similarity=0.027 Sum_probs=95.8
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+++..++|.|+++++|+|+.+++........+..++.+++|+++||+ ||||.+.+...+..++..++....
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~~~~~~~~~-------- 345 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALIIFTLGVYQH-------- 345 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHHHHHHHHh--------
Confidence 45667899999999999999999999999999999999999999998 999987766555444432222211
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHH-HHHHHhHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAA-GSMLSATF 162 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~ni-G~~i~~~~ 162 (171)
..+.....+.+++.|+..............|.++++ .++++.++.....++ |..+++.+
T Consensus 346 -------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~-------~~g~a~gi~~~~g~l~g~~~~~~~ 405 (467)
T PRK09556 346 -------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKK-------AIGVANGIKGTFAYLFGDSFAKVG 405 (467)
T ss_pred -------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchh-------hHHHHHHHHHHHHHHHhHHHHhhh
Confidence 002233444555555433222222234556766532 378999998888886 77899999
Q ss_pred HHhhcc
Q 045901 163 IVYIQD 168 (171)
Q Consensus 163 ~~~i~~ 168 (171)
.+++.|
T Consensus 406 ~G~i~~ 411 (467)
T PRK09556 406 LGMIAD 411 (467)
T ss_pred HHHHhc
Confidence 999988
No 83
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.9e-10 Score=96.34 Aligned_cols=134 Identities=13% Similarity=0.126 Sum_probs=112.1
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...+.+.+++.++++..+++.+-.++..+..+.++..|++.+|+ |+|+.++.++.++.+|..+..-++.
T Consensus 32 ~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~---------- 100 (422)
T COG0738 32 NDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS---------- 100 (422)
T ss_pred chhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh----------
Confidence 34577888899999999999999999999999999999999998 9999999999999999988854431
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
.+.+..|++++++.+.|.|..++..+|++++..++++.. + | .|.-...+.+|+.++|.+++++
T Consensus 101 ----------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~---~-r---lnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 101 ----------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAA---F-R---LNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred ----------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHH---H-H---HHHHHHhhhhHHHHHHHHHHHH
Confidence 246788999999999999999999999999998764322 1 2 2233345679999999888877
Q ss_pred cc
Q 045901 167 QD 168 (171)
Q Consensus 167 ~~ 168 (171)
..
T Consensus 164 il 165 (422)
T COG0738 164 IL 165 (422)
T ss_pred HH
Confidence 55
No 84
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.23 E-value=1.2e-10 Score=99.04 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=110.4
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
+++....+|.|+++.+|+++.+++.......+...++.++.|++.||+ |||+.+.++..+..++..++.... .+
T Consensus 271 ~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~~~~~~~~-~~---- 344 (485)
T TIGR00711 271 LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGFYWRAFTF-TP---- 344 (485)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHhccC-CC----
Confidence 455667789999999999999999999999999999999999999997 999999999998888887665221 01
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
..+.+.+.....+.++|.|...+.......+..++ ++++++.+++....++|..+++.+
T Consensus 345 --------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~g~~ig~~i 403 (485)
T TIGR00711 345 --------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP-------HKIARGSSLSNFTRQLGGSIGTAL 403 (485)
T ss_pred --------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-------HHHhHHHHHHHHHHHHHHHHHHHH
Confidence 11344455567788999988877777666665532 237889999999999999999988
Q ss_pred HHhhcc
Q 045901 163 IVYIQD 168 (171)
Q Consensus 163 ~~~i~~ 168 (171)
.+.+.+
T Consensus 404 ~g~~~~ 409 (485)
T TIGR00711 404 ITTILT 409 (485)
T ss_pred HHHHHH
Confidence 887765
No 85
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.23 E-value=1.7e-10 Score=100.06 Aligned_cols=113 Identities=17% Similarity=0.164 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHH
Q 045901 24 AATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLL 103 (171)
Q Consensus 24 ~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (171)
+.+++.+.+.+++.++.++.|+++|++ |||++++++.+++.+|.+++.++. +...+
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~-----------------------~~~~l 145 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP-----------------------SWYQL 145 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh-----------------------hHHHH
Confidence 458999999999999999999999998 999999999999999999998875 57789
Q ss_pred HHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 104 YSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 104 ~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
++||++.|+|.|+....++.+++|.-+++ .|+.....+.+..++|.+++........
T Consensus 146 ~~GR~l~G~g~G~~~~~~piy~sEiap~~-------~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 146 IVGRILTGLGVGGASVLAPVYISEIAPAH-------IRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHhccchhhhhhcchhhHhhcCChh-------hhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999986532 3788888889999999999866554443
No 86
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.22 E-value=1.1e-10 Score=95.46 Aligned_cols=141 Identities=16% Similarity=0.092 Sum_probs=102.8
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+.+..+++.|+++++|+++.+++.+.....+...++.+++|+++||+ |||+.+..+..+..+...+..... ..
T Consensus 236 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-~~----- 308 (394)
T TIGR00883 236 YLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALLAVPLLMAL-LD----- 308 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHH-hc-----
Confidence 44566789999889999999999999999999999999999999998 999988766555444332111111 00
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHH-HHHHHHHHHHHhHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWY-YVSIAAGSMLSATF 162 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~-y~~~niG~~i~~~~ 162 (171)
..+.+.+.....+.+++.+...+...+++.|.+++++ |++.++.. .....+|..+++.+
T Consensus 309 -------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------~~~~~~~~~~~~~~~g~~~~p~~ 368 (394)
T TIGR00883 309 -------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV-------RYTGASLAYNLAGAIFGGFAPYI 368 (394)
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc-------eeeEeeehhHhHHHHHhhHHHHH
Confidence 0123455566678888888899999999999987532 45566653 34556788899999
Q ss_pred HHhhccccC
Q 045901 163 IVYIQDNLG 171 (171)
Q Consensus 163 ~~~i~~~~g 171 (171)
.+++.|+.|
T Consensus 369 ~g~l~~~~g 377 (394)
T TIGR00883 369 AAALVAMTG 377 (394)
T ss_pred HHHHHHHcC
Confidence 998877543
No 87
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.22 E-value=1.6e-10 Score=96.68 Aligned_cols=138 Identities=14% Similarity=0.114 Sum_probs=107.0
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+++++..+++.|+++ +|++..+++.....+.++..++.++.|+++||+ |||+.+.++..+..++..++...+ .
T Consensus 220 ~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~~~~~~~~---~-- 292 (393)
T PRK09705 220 GYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGFCGFIWLP---L-- 292 (393)
T ss_pred HHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHHHHcc---c--
Confidence 345677789999975 799999999999999999999999999999997 999999999888888776543221 0
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
+..... .++.+++.|...|.......|..+++ +.+++.+++.+...+++..+++.
T Consensus 293 -----------------~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~------~~~g~~~g~~~~~~~~~~~~gp~ 347 (393)
T PRK09705 293 -----------------QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQP------AIAGKLVAFMQGIGFIIAGLAPW 347 (393)
T ss_pred -----------------hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 111121 24567888888887776667766421 13688899999999999999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.|..|
T Consensus 348 ~~G~l~~~~g 357 (393)
T PRK09705 348 FSGVLRSISG 357 (393)
T ss_pred HHHHHHHHhC
Confidence 9999988643
No 88
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.21 E-value=2.5e-10 Score=93.74 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=103.6
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
++++..++|.|+++ .|+++.+++.+.+...++..++.++.|+++||+.+||+.+.++.++..++.+.+....
T Consensus 213 ~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~------- 284 (355)
T TIGR00896 213 YYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP------- 284 (355)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh-------
Confidence 45566778889975 7999999999999999999999999999999974566677788888888876665432
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
. +.... ...+.+++.|...|...+...+..++ + ++++..+++.+...+++..+++.+
T Consensus 285 --------------~-~~~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~--~----~~~g~~~~~~~~~~~~~~~~gp~~ 341 (355)
T TIGR00896 285 --------------M-HGLWA--WALVLGLGQGGAFPLALTLIGLRSRQ--A----AQAAALSAMAQSIGYLLAALGPLF 341 (355)
T ss_pred --------------h-hHHHH--HHHHHHHhhhhHhHHHHHHHHHhccC--H----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11111 34578899999888877776665432 1 125667777777788888999999
Q ss_pred HHhhccccC
Q 045901 163 IVYIQDNLG 171 (171)
Q Consensus 163 ~~~i~~~~g 171 (171)
.+++.|..|
T Consensus 342 ~G~l~~~~g 350 (355)
T TIGR00896 342 VGVLHDISG 350 (355)
T ss_pred HHHHHHHhc
Confidence 999988654
No 89
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.21 E-value=3.8e-10 Score=97.07 Aligned_cols=129 Identities=14% Similarity=0.040 Sum_probs=103.3
Q ss_pred HHHHhhH-hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 045901 10 MILYLCR-EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQM 88 (171)
Q Consensus 10 l~~yl~~-~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~ 88 (171)
+.+.+.+ ++|+|+.|.+.+.+++.....+..++.|++.||+ |+||.+.++.++..+..+++.++...+
T Consensus 56 l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~~~~~~~a~~~~---------- 124 (462)
T PRK15034 56 VTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIPCVWLGIAVQNP---------- 124 (462)
T ss_pred HHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHccc----------
Confidence 3455544 7999999999999999999999999999999998 999999999999999988777652100
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
..++..+++.+++.|++ |...+.....+++.++++ +++++.+++....|+|..+++.+.+.
T Consensus 125 --------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~-------~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 125 --------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA-------KQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred --------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh-------HhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 11577888999999998 667788999999998642 37889998877778887766555543
No 90
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.21 E-value=5.2e-10 Score=91.48 Aligned_cols=136 Identities=14% Similarity=0.110 Sum_probs=96.8
Q ss_pred HHHHHHhhHhhC--CChHHHHHHHHHH-----HHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 8 PNMILYLCREYN--METTAATNVLFIW-----TAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 8 ~~l~~yl~~~lg--~s~~~a~~~~~~~-----~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
..+..++.++.. .++++.+...+.. .+...++.++.|+++||+ ||||.+.++.++..++.+++.++...+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 91 (394)
T TIGR00883 13 GFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI 91 (394)
T ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh
Confidence 345666766654 3445554444322 223346788999999998 99999999999999998887765421100
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
.......+++++++.|++.|...+..+++++|.++++ +|++...+.....++|.++++
T Consensus 92 ---------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~G~~i~~ 149 (394)
T TIGR00883 92 ---------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG-------KRGFYGSFQQVGAPVGLLLAA 149 (394)
T ss_pred ---------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc-------cchHHHHHHHHHHHHHHHHHH
Confidence 0011235778899999999999999999999987643 267788888888889988888
Q ss_pred HHHHhh
Q 045901 161 TFIVYI 166 (171)
Q Consensus 161 ~~~~~i 166 (171)
.+...+
T Consensus 150 ~~~~~~ 155 (394)
T TIGR00883 150 LTVLLL 155 (394)
T ss_pred HHHHHH
Confidence 766554
No 91
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.21 E-value=2e-10 Score=95.71 Aligned_cols=134 Identities=10% Similarity=-0.110 Sum_probs=104.4
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+.+..++|.|+++ .|+++.+++.+...+.+...++.++.|+++||+ |||+.+..+.+...++.+++....
T Consensus 237 ~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-------- 306 (406)
T PRK11551 237 YFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAAAP-------- 306 (406)
T ss_pred HHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 3445567788864 799999999999999999999999999999998 999999887776666655443221
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+.+.+.+..++.+++.++..+...++..|.++++ .|++..++.+...++|..+++.+.
T Consensus 307 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~g~~~~ 364 (406)
T PRK11551 307 ---------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQ-------VRGTGVGAAVAVGRLGSMAGPLLA 364 (406)
T ss_pred ---------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchh-------hhhhhhhHHHHhhhHHHHHHhhhH
Confidence 2233444556677777777888888888887542 268889999999999999999999
Q ss_pred Hhhccc
Q 045901 164 VYIQDN 169 (171)
Q Consensus 164 ~~i~~~ 169 (171)
+++.++
T Consensus 365 g~l~~~ 370 (406)
T PRK11551 365 GQLLAL 370 (406)
T ss_pred hhhhcc
Confidence 998764
No 92
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.21 E-value=3.3e-10 Score=94.73 Aligned_cols=136 Identities=13% Similarity=0.197 Sum_probs=91.7
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHH-HHHHhhhhhhhHHHhhhccCchhHH-HHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIW-TAATNFVPILGAFLADSCMGRYPMI-GFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~-~~~~~i~~~~~G~laDr~~Gr~~~i-~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
.+.+.++.|+++++|.|+.+.+...+.. .....++++++|+ +||+ ||||.+ ..+.++..++..+..+++
T Consensus 33 ~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~------- 103 (393)
T PRK15011 33 LQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVLACTLFAWNR------- 103 (393)
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHHHHHHHHHhh-------
Confidence 3567889999999999999999997655 4566667777777 9998 998875 455555556655554443
Q ss_pred CcccccccCCCCccchhHHHHH-HHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 83 PVCDQMRSGCESATASQLMLLY-SAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~-~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
+.+.++ .++.+.+.+ +...|....+..|..++++ +....+.++.....++|.++++.
T Consensus 104 ----------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~lg~~~g~~ 161 (393)
T PRK15011 104 ----------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG-----REAVMFSSFLRAQVSLAWVIGPP 161 (393)
T ss_pred ----------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc-----chHHHHHHHHHHHHHHHHHHhhH
Confidence 344443 334444443 4556666666666543211 11334456777888999999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.++.|
T Consensus 162 i~~~l~~~~g 171 (393)
T PRK15011 162 LAYALAMGFS 171 (393)
T ss_pred HHHHHHHhcC
Confidence 9999877544
No 93
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.7e-10 Score=95.84 Aligned_cols=129 Identities=12% Similarity=0.153 Sum_probs=117.1
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+-+.+++|.|..++|.+++.|.....++.++-..+.||+ .|||.++..+.++.++.++.+++.
T Consensus 37 p~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~lFi~~n~l~alAp---------------- 99 (394)
T COG2814 37 PPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLALFIVSNLLSALAP---------------- 99 (394)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHHHhc----------------
Confidence 344569999999999999999999999999999999997 999999999999999999999875
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNLG 171 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~g 171 (171)
++..++++|++.++.-|.+.+...+..+|..+++ ||+++......+..+..++|.-++.++.|.+|
T Consensus 100 -------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~-------~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G 165 (394)
T COG2814 100 -------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPG-------KRGRALALVFTGLTLATVLGVPLGTFLGQLFG 165 (394)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc-------chhhHHHHHHHHHHHHHHHhccHHHHHHHHhh
Confidence 6889999999999999999999999999998753 36889999889999999999888888888665
No 94
>PRK09952 shikimate transporter; Provisional
Probab=99.19 E-value=5.1e-10 Score=95.12 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=92.6
Q ss_pred HHhhHhh--CCChHHHHHHH-----HHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 12 LYLCREY--NMETTAATNVL-----FIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 12 ~yl~~~l--g~s~~~a~~~~-----~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
.+..+++ +.++.+ +.+. ....++..++.++.|+++||+ ||||.+.++.++..++.+++.+++.+...
T Consensus 47 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~---- 120 (438)
T PRK09952 47 LVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRMLMLTVWMMGIATALIGLLPSFSTI---- 120 (438)
T ss_pred HHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHhcCCcHHHH----
Confidence 3455554 666663 4332 223345667788899999998 99999999999999999888776421100
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
.......+++.|++.|++.|+..|....++.|.+++++ |++..+....+..+|.+++..+..
T Consensus 121 -----------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~-------rg~~~~~~~~g~~~G~~l~~~~~~ 182 (438)
T PRK09952 121 -----------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK-------KAFYSSGVQVGYGVGLLLSTGLVS 182 (438)
T ss_pred -----------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC-------CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00112357788999999999999999999999876432 566777777788888887766555
Q ss_pred hh
Q 045901 165 YI 166 (171)
Q Consensus 165 ~i 166 (171)
++
T Consensus 183 ~l 184 (438)
T PRK09952 183 LI 184 (438)
T ss_pred HH
Confidence 44
No 95
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.18 E-value=2.1e-10 Score=96.27 Aligned_cols=136 Identities=10% Similarity=0.028 Sum_probs=108.9
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
++...+|.|+++.+|+++.+.+.+.....++..++.++.++++||. ++++.+..+.++..++.+++.+..
T Consensus 241 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~--------- 310 (417)
T PRK10489 241 AVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP--------- 310 (417)
T ss_pred hHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc---------
Confidence 4455678899887999999999999999999999999999999996 888888888888887766554321
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
+.....+..++.+++.+...+...+++.|..++ +.|++.+++++...++|..+++.+.+
T Consensus 311 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 311 --------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPD-------EMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH-------HHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 344456667778888877777777777777642 24789999999999999999999999
Q ss_pred hhccccC
Q 045901 165 YIQDNLG 171 (171)
Q Consensus 165 ~i~~~~g 171 (171)
++.+..|
T Consensus 370 ~l~~~~g 376 (417)
T PRK10489 370 GLGAMMT 376 (417)
T ss_pred HHHHHhc
Confidence 9988654
No 96
>PRK09952 shikimate transporter; Provisional
Probab=99.18 E-value=5.8e-10 Score=94.79 Aligned_cols=140 Identities=11% Similarity=0.067 Sum_probs=100.1
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
++|.+..+++.|+++++|+++.....+.........++.++.|+++||+ ||||.+..+.++..++.+.+..... .
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~--~-- 339 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTLSAFPFFMALE--A-- 339 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHH--c--
Confidence 3566777889999999999998766666666677788888999999997 9999999887776655443332210 0
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHH-HHHHHHHHh
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVS-IAAGSMLSA 160 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~-~niG~~i~~ 160 (171)
......+.+..++.+++.+...+...++.+|.++.+ .|.+..++-|.. ..+|+.++|
T Consensus 340 ---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~-------~r~tg~g~~~~~~~~lgg~~~p 397 (438)
T PRK09952 340 ---------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGAS-------YRYSGAGVGYQVASVVGGGFTP 397 (438)
T ss_pred ---------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcc-------hhHHHHhHHHHHHHHHHHHHHH
Confidence 012333444556667888888888899999998752 256677765443 457888889
Q ss_pred HHHHhhcc
Q 045901 161 TFIVYIQD 168 (171)
Q Consensus 161 ~~~~~i~~ 168 (171)
.+.+++.+
T Consensus 398 ~i~g~l~~ 405 (438)
T PRK09952 398 FIAAALVT 405 (438)
T ss_pred HHHHHHHH
Confidence 88888865
No 97
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.17 E-value=1.6e-10 Score=97.23 Aligned_cols=65 Identities=9% Similarity=-0.020 Sum_probs=57.9
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHH
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMV 69 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ 69 (171)
....++++.|+++++|+|+.+.+.+.+.+.+...+++++.|+++||+ ||||.+.++..+..++..
T Consensus 27 ~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 27 SSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVLFG 91 (420)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 44678899999999999999999999999999999999999999998 999999887776665543
No 98
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.17 E-value=8.8e-11 Score=82.43 Aligned_cols=109 Identities=18% Similarity=0.199 Sum_probs=89.1
Q ss_pred HHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHH
Q 045901 31 IWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLM 110 (171)
Q Consensus 31 ~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 110 (171)
.+..+..++.++.|+++||+ ||||.+..+..+..++.+++.... +.+.+.+.+.+.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~ 61 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS-----------------------NITVLIIARFLQ 61 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc-----------------------cHHHHHHHHHHH
Confidence 44567788899999999998 999999999999988877665432 355677778899
Q ss_pred HHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 111 SLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 111 g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+++.+...+...++..|.++++ +|++..++.....++|..+++.+.+++.+..
T Consensus 62 g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 114 (141)
T TIGR00880 62 GFGAAFALVAGAALIADIYPPE-------ERGVALGLMSAGIALGPLLGPPLGGVLAQFL 114 (141)
T ss_pred HHHHHHHHHhHHHHHHHHCChh-------hhhHHHHHHHHhHHHHHHHhHHhHHHHhccc
Confidence 9999999999999999987643 2678888888899999999999888887643
No 99
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.17 E-value=3.3e-10 Score=95.17 Aligned_cols=138 Identities=12% Similarity=0.167 Sum_probs=102.1
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc---cCchh-HHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC---MGRYP-MIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~-~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+..+++.|+++++|+++.+++.+.+...+...+..++.|+++||. +|||| .+.++.+...++.+++.... ...
T Consensus 18 ~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~---~~~ 94 (437)
T TIGR00792 18 VSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP---DFS 94 (437)
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC---CCC
Confidence 446788999999999999999999999999999999999999983 38855 57778888887776664432 110
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
...+...+++...+.+++.+...++..++..|..++ ++ +|++...+.....++|.+++..
T Consensus 95 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~----~R~~~~~~~~~~~~~g~~l~~~ 154 (437)
T TIGR00792 95 --------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLD--PR----ERESLSTFRRFGATLGGLLVAV 154 (437)
T ss_pred --------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCC--HH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 011344555666778888888888888888887643 22 3677788877788888776655
Q ss_pred HHHhh
Q 045901 162 FIVYI 166 (171)
Q Consensus 162 ~~~~i 166 (171)
+.+.+
T Consensus 155 ~~~~l 159 (437)
T TIGR00792 155 IVLPL 159 (437)
T ss_pred HHHHH
Confidence 54433
No 100
>PRK15075 citrate-proton symporter; Provisional
Probab=99.16 E-value=5.2e-10 Score=94.74 Aligned_cols=141 Identities=12% Similarity=0.052 Sum_probs=96.0
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHH-HHHhhhcCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVL-LWFTAIFPQEK 81 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~l-l~~~~~~~~~~ 81 (171)
++++..++|.|+++.+|+++.+++.+.........++.+++|+++||+ ||||.+..+.++..+...+ ..... + .
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~--~--~ 328 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALSWLV--A--A 328 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHH--c--C
Confidence 456677899999988999999999888888899999999999999998 9999988765554332211 11111 0 0
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHHHHh
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIA-AGSMLSA 160 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~n-iG~~i~~ 160 (171)
+ ......+...+.+++.|...+...++..|.++++. |++..++.+...+ +++.+++
T Consensus 329 ---------------~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~-------rg~~~g~~~~~~~~~~g~~~p 385 (434)
T PRK15075 329 ---------------P-SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV-------RTAGFSLAYSLATAIFGGFTP 385 (434)
T ss_pred ---------------C-chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc-------cchheeHHHHHHHHHHhhhHH
Confidence 0 12223333445566777777777788899886532 5667776443333 3466688
Q ss_pred HHHHhhccccC
Q 045901 161 TFIVYIQDNLG 171 (171)
Q Consensus 161 ~~~~~i~~~~g 171 (171)
.+.+++.|..|
T Consensus 386 ~~~g~i~~~~g 396 (434)
T PRK15075 386 AISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHhcC
Confidence 88888877543
No 101
>PRK03545 putative arabinose transporter; Provisional
Probab=99.16 E-value=1.1e-09 Score=91.16 Aligned_cols=136 Identities=13% Similarity=-0.004 Sum_probs=100.1
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
++...+++.|++++.|+++.+++.+...+.....++.++.|+++||+ |||+. ..+..+..++..++....
T Consensus 222 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~~~l~~~~-------- 291 (390)
T PRK03545 222 FTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCLLLLLPAA-------- 291 (390)
T ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHHHHHHHHh--------
Confidence 34456678888888999999999999999999999999999999997 88764 445554444443332211
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
.+.+.+.+...+.|++.+...+...+.+.|..+ + +++++.+++....++|..+|+.+.
T Consensus 292 --------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~----~----~~~~~~g~~~~~~~~g~~~G~~~~ 349 (390)
T PRK03545 292 --------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP----D----ATDVAMALFSGIFNIGIGAGALLG 349 (390)
T ss_pred --------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC----C----cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 134455566667788877777777766666432 1 257788888888899999999999
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.|+.|
T Consensus 350 G~~~~~~g 357 (390)
T PRK03545 350 NQVSLHLG 357 (390)
T ss_pred HHHHhccC
Confidence 99988764
No 102
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.14 E-value=7.3e-10 Score=90.16 Aligned_cols=143 Identities=15% Similarity=0.033 Sum_probs=95.7
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhH-HHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPM-IGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~-i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
+....+++.|+++++|+++.+++.+.....+...++.+++|+++||+ |||+. +........++.++..........
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 308 (399)
T TIGR00893 232 GFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAIIAGLVLSLLMFATNY-- 308 (399)
T ss_pred HHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHHHHHHHHHHHHHHhcc--
Confidence 44566788999999999999999999999999999999999999998 88861 111111122221111111100000
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
............+...+.+ ..+...++.+|..+++ .|++.+++.....++|..+++.+
T Consensus 309 --------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~g~~~~~~i 366 (399)
T TIGR00893 309 --------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGN-------IAGLTGGLINSLGNLGGIVGPIV 366 (399)
T ss_pred --------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChh-------HHHHHHHHHHHHHHHhhhhhhHH
Confidence 0012222222223333333 7888888999987642 37889999999999999999999
Q ss_pred HHhhccccC
Q 045901 163 IVYIQDNLG 171 (171)
Q Consensus 163 ~~~i~~~~g 171 (171)
.+++.+..|
T Consensus 367 ~g~l~~~~g 375 (399)
T TIGR00893 367 IGAIAATTG 375 (399)
T ss_pred hhhhccCCC
Confidence 999988654
No 103
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.14 E-value=2.3e-10 Score=96.08 Aligned_cols=137 Identities=19% Similarity=0.207 Sum_probs=103.5
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
+.|++..++ ++.+.+.+.....+...++.++.++++||+ ||||++.++.++..++.+++.+..
T Consensus 246 ~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~--------------- 308 (437)
T TIGR00792 246 VYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLGYLIFFFAG--------------- 308 (437)
T ss_pred heeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcc---------------
Confidence 344444455 466677777778888999999999999998 999999999998888877664421
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
++.+.+.+..++.+++.+...+...++++|..+.++.+..++.++.+++.+.+..++|..+++.+.+++.+..
T Consensus 309 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 309 -------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred -------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1334556666788899999999999999998765432111123688899999999999999999999887654
Q ss_pred C
Q 045901 171 G 171 (171)
Q Consensus 171 g 171 (171)
|
T Consensus 382 G 382 (437)
T TIGR00792 382 G 382 (437)
T ss_pred C
Confidence 3
No 104
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.14 E-value=1e-09 Score=90.00 Aligned_cols=137 Identities=20% Similarity=0.230 Sum_probs=97.6
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc----cCchhH-HHHHHHHHHHHHHHHHHhhhcCC
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC----MGRYPM-IGFGCIISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~----~Gr~~~-i~~~~~l~~lg~~ll~~~~~~~~ 79 (171)
++.....+.+.+++|+|.++.+..... .....+ .++.|+++||+ +||||. ++.+.++..+....+.+.. +
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~--~- 79 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV--P- 79 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC--c-
Confidence 344444444455889999999999755 333344 77999999997 489997 4667777776655554432 0
Q ss_pred CCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 045901 80 EKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS 159 (171)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~ 159 (171)
..+.+.+....++.+++.+...+...+++.|.++++ +|+++.++...+.++|.+++
T Consensus 80 -----------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-------~r~~~~~~~~~~~~~G~~~~ 135 (356)
T TIGR00901 80 -----------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDE-------ELGYGSTIYIVGYRAGMLLS 135 (356)
T ss_pred -----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh-------hhchHHHHHHHHHHHHHHHH
Confidence 113444555555677888888999999999988532 37888899999999999999
Q ss_pred hHHHHhhcccc
Q 045901 160 ATFIVYIQDNL 170 (171)
Q Consensus 160 ~~~~~~i~~~~ 170 (171)
+.+.+++.+..
T Consensus 136 ~~l~~~l~~~~ 146 (356)
T TIGR00901 136 GSLALVLASPE 146 (356)
T ss_pred HHHHHHHhhhc
Confidence 98887776543
No 105
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.14 E-value=8.1e-10 Score=91.82 Aligned_cols=131 Identities=18% Similarity=0.255 Sum_probs=98.6
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
...++|.|+++ .|.++.+++.+.........++.++.|+++||+ |||+.+..+..+..++...+. ..
T Consensus 219 ~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~---------- 285 (381)
T PRK03633 219 LYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ---------- 285 (381)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh----------
Confidence 34567888875 699999999999999999999999999999998 999999999888887765432 11
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
......+.+.+++.+...|...+.+.|..+++ +++.....+....++|.++++.+.++
T Consensus 286 ---------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~lG~~igp~~~G~ 343 (381)
T PRK03633 286 ---------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHH-------ELVAMNQALLLSYTVGSLLGPSFTAM 343 (381)
T ss_pred ---------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11233445666666667788777777765321 24556666677889999999999999
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.|+.|
T Consensus 344 l~~~~g 349 (381)
T PRK03633 344 LMQNYS 349 (381)
T ss_pred HHHHhC
Confidence 987653
No 106
>TIGR00895 2A0115 benzoate transport.
Probab=99.14 E-value=7.1e-10 Score=90.93 Aligned_cols=130 Identities=12% Similarity=-0.010 Sum_probs=98.4
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
.+..+++ ++.+++|+++.+++.......++..++.+++|+++||+ |||+.+....+......++.....
T Consensus 268 ~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------- 336 (398)
T TIGR00895 268 FLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFAVLVGSTLF--------- 336 (398)
T ss_pred HHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHHHHHHhh---------
Confidence 3444555 66678899999999999999999999999999999998 998655544444333332222111
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
+.....+..++.+++.+...+...+...|.++++ .|++.+++.....++|..+++.+.+
T Consensus 337 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 337 --------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTA-------IRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred --------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHH-------HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 2344566667888999999999999999987532 3788999999999999999999988
Q ss_pred hh
Q 045901 165 YI 166 (171)
Q Consensus 165 ~i 166 (171)
++
T Consensus 396 ~l 397 (398)
T TIGR00895 396 YL 397 (398)
T ss_pred hc
Confidence 75
No 107
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.14 E-value=4.6e-10 Score=97.12 Aligned_cols=121 Identities=12% Similarity=0.033 Sum_probs=104.5
Q ss_pred HhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCc
Q 045901 16 REYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESA 95 (171)
Q Consensus 16 ~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 95 (171)
+....+........+++.++..+++++.|+++||+ |||++++.++++..++.+..+++.
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~-------------------- 169 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP-------------------- 169 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC--------------------
Confidence 45667888999999999999999999999999995 999999999999999998887765
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 96 TASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 96 ~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
+++.+++.|++.|++.++...+...+++|.++++. |+....+ +.....+..+++.+.+|+.+
T Consensus 170 ---~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~-------R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 170 ---NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ-------RGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred ---cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch-------hhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 57889999999999999999999999999987532 6777777 66777777777777777655
No 108
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.13 E-value=4.5e-10 Score=96.78 Aligned_cols=128 Identities=19% Similarity=0.176 Sum_probs=114.1
Q ss_pred hHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCC
Q 045901 15 CREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCES 94 (171)
Q Consensus 15 ~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
+.++++++.+.+.+.+.+..+..++.+.+|+++||+ |-||++..+.++..+++++...+..
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~------------------ 125 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS------------------ 125 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 347899999999999999999999999999999998 9999999999999999999988762
Q ss_pred ccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc-cC
Q 045901 95 ATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN-LG 171 (171)
Q Consensus 95 ~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~-~g 171 (171)
.+.+.+++.|+++|++.|...|+...+.+...|+++ |+++....+.+..+|.+++..+++++.++ +|
T Consensus 126 ---~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E-------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~G 193 (466)
T KOG2532|consen 126 ---IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE-------RSTFIAILTAGSQLGTIITMPVSGLLCESSLG 193 (466)
T ss_pred ---hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH-------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC
Confidence 234567899999999999999999999999987432 78899999999999999999999999887 54
No 109
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.13 E-value=8.2e-10 Score=95.41 Aligned_cols=147 Identities=14% Similarity=0.166 Sum_probs=105.1
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhh----ccCchhHHHHH-HHHHHHHHHHHHHhhhcCCCC
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADS----CMGRYPMIGFG-CIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr----~~Gr~~~i~~~-~~l~~lg~~ll~~~~~~~~~~ 81 (171)
.+++++|+ +++|.++..++.+..+..+...+..++.|+++|| + ||||.++++ .+...++.+++..+..+....
T Consensus 24 ~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~ 101 (477)
T TIGR01301 24 LSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAALVAFAVILIGFAADIGHLF 101 (477)
T ss_pred HHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHHHHHHHHHHHhCchhhhhc
Confidence 45667776 5899999999999999999999999999999995 6 999998875 666666666555543211000
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
-+ .............+.+++.+.-+.....+++..++++|..+++++ +++.++.|+.+..++|.++++.
T Consensus 102 ~~------~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~-----~~~~a~~~~~~~~~lG~ilg~~ 170 (477)
T TIGR01301 102 GD------NLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR-----RTRIANAYFSFFMAIGNVLGYA 170 (477)
T ss_pred cc------cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000011123455666677788888899999999999976432 2467999999999999999998
Q ss_pred HHHhh
Q 045901 162 FIVYI 166 (171)
Q Consensus 162 ~~~~i 166 (171)
+.++.
T Consensus 171 ~g~~~ 175 (477)
T TIGR01301 171 AGAYS 175 (477)
T ss_pred HHHHH
Confidence 87764
No 110
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.13 E-value=7.3e-10 Score=92.22 Aligned_cols=134 Identities=14% Similarity=0.174 Sum_probs=100.7
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
..+..+++.|+.+ .|++ +++.....+.++..++.++.|++.||+ ||||.+..+.++..++.+++....
T Consensus 233 ~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~-------- 300 (399)
T PRK05122 233 GTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP-------- 300 (399)
T ss_pred HHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 3455677788764 4663 445666777788888999999999997 999999999888888876665432
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+.+.+.+..++.+++.+...|.......|..++ +++++.+++++...++|..+++.+.
T Consensus 301 ---------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~~~~~~ 358 (399)
T PRK05122 301 ---------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPP-------QNRGAALGAYSVFLDLSLGITGPLA 358 (399)
T ss_pred ---------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234556677889999888877777666665532 2378999999999999998888888
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.+..|
T Consensus 359 g~l~~~~g 366 (399)
T PRK05122 359 GLVASWFG 366 (399)
T ss_pred HHHHHHcC
Confidence 88876543
No 111
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.12 E-value=1.4e-09 Score=90.53 Aligned_cols=135 Identities=12% Similarity=0.086 Sum_probs=110.1
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
.....+.++|++ ++|.++.+++.+.........+..++.+++.||+ |+|+.+.++.++..+..+++.+.+
T Consensus 222 ~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~-------- 291 (382)
T TIGR00902 222 AAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVGRWAIIGAIE-------- 291 (382)
T ss_pred HHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHHHHHHHHhHh--------
Confidence 445668889996 4899999999999998899999999999999998 999999999999999988776543
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHH-HHHHHHHHHHhHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYY-VSIAAGSMLSATF 162 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y-~~~niG~~i~~~~ 162 (171)
+.+.++....+.++..|...+....++.|. +++ ++.++.+.+. ....+|..+++.+
T Consensus 292 ---------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~-------~~~~~q~~~~~~~~g~g~~~g~~~ 348 (382)
T TIGR00902 292 ---------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGS-------EIAKLQALYNALAMGGLIAIFTAF 348 (382)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHh-------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777899999999999988888764 321 2466666654 4567999999999
Q ss_pred HHhhccccC
Q 045901 163 IVYIQDNLG 171 (171)
Q Consensus 163 ~~~i~~~~g 171 (171)
+|++.|+.|
T Consensus 349 ~G~l~~~~g 357 (382)
T TIGR00902 349 AGFIYPTLG 357 (382)
T ss_pred HHHHHHhcc
Confidence 999998754
No 112
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.12 E-value=1.6e-09 Score=90.82 Aligned_cols=134 Identities=16% Similarity=0.134 Sum_probs=97.2
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
+...++.|+++ .|+++.+++.+.....++..++.++.|+++||+ |||+.+..+.++..++.+++.... .
T Consensus 250 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~---~------ 318 (426)
T PRK12307 250 IFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP---Q------ 318 (426)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc---c------
Confidence 45677888875 699999999999999999999999999999998 999999999888776654443221 0
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHH--hccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSL--GGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~--g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
. ... ....++.++ ...+..+..+..+.|.++++ ++++..++.+...++|..+++.+.
T Consensus 319 -----------~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 319 -----------D-NYL--LLGACLFGLMATNVGVGGLVPKFLYDYFPLE-------VRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred -----------c-cHH--HHHHHHHHHHHhcccHhHHHHHHHHHhCcHH-------HHhhhhhHHHHHHhHHHHHHHHHH
Confidence 0 111 122223333 22333455666777877532 378899998899999999999999
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.+..|
T Consensus 378 g~l~~~~g 385 (426)
T PRK12307 378 TWLGITMG 385 (426)
T ss_pred HHHHHccc
Confidence 99887654
No 113
>PRK12382 putative transporter; Provisional
Probab=99.12 E-value=7.5e-10 Score=92.06 Aligned_cols=134 Identities=14% Similarity=0.159 Sum_probs=102.3
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
..+..+++.|+++ .++++ ++.....+..+..++.++.|++.||+ ||||.+..+..+..++.+++....
T Consensus 233 ~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~-------- 300 (392)
T PRK12382 233 AVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP-------- 300 (392)
T ss_pred hHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc--------
Confidence 3455567778764 46654 45566667777888999999999997 999999999998888876654432
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+.+...+...+.+++.+...|.......|.+++ ++|++.+++++...++|..+++.+.
T Consensus 301 ---------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~ig~~~~ 358 (392)
T PRK12382 301 ---------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPS-------QVRGTALGGYAAFQDIAYGVSGPLA 358 (392)
T ss_pred ---------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234556677788888888888777777776542 2478999999999999999999999
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.|+.|
T Consensus 359 g~l~~~~g 366 (392)
T PRK12382 359 GMLATSFG 366 (392)
T ss_pred HHHHHHhC
Confidence 99887654
No 114
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.11 E-value=7.2e-10 Score=93.73 Aligned_cols=142 Identities=19% Similarity=0.206 Sum_probs=114.4
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
....++.|.+..+|.+ ...+.+.....+.+.++.++.++++||+ ||||++..+.++..++.+++.+...
T Consensus 244 ~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~~--------- 312 (428)
T PF13347_consen 244 MNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAALGFLLLFFLGP--------- 312 (428)
T ss_pred hhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHHHHHHHHHHHh---------
Confidence 3445667777777777 5667777788889999999999999998 9999999999999999988776541
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
++.+.+++...+.+++.|...+...++.+|..+.++.+.++++.+..++.+.+...++..++..+.+.
T Consensus 313 ------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 313 ------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred ------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 24677888888999999999999999999998865433222345788888889999999999988887
Q ss_pred hcccc
Q 045901 166 IQDNL 170 (171)
Q Consensus 166 i~~~~ 170 (171)
+.+..
T Consensus 381 ~l~~~ 385 (428)
T PF13347_consen 381 LLALV 385 (428)
T ss_pred HHHHh
Confidence 76543
No 115
>PTZ00207 hypothetical protein; Provisional
Probab=99.11 E-value=1.5e-09 Score=95.83 Aligned_cols=132 Identities=15% Similarity=0.159 Sum_probs=103.2
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQM 88 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~ 88 (171)
.....+++++|++..+.+.+.+..... .+..+++|+++||+ |||+++.++.++..+|++++.++.. ...
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~-~~i-------- 116 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQ-EVI-------- 116 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhc-ccc--------
Confidence 344567889999999999988774444 34566789999998 9999999999999999999887631 000
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH-HhHHHHhhc
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSML-SATFIVYIQ 167 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i-~~~~~~~i~ 167 (171)
..+.+.+++.+.+.|+|.+...+.....+.+.+++ +|+++.++.....++|+++ ++....++.
T Consensus 117 --------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~--------~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 117 --------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS--------NRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred --------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12577888999999999999999889899998852 2688999999999999864 555554443
No 116
>PRK09848 glucuronide transporter; Provisional
Probab=99.09 E-value=4.1e-10 Score=95.68 Aligned_cols=140 Identities=15% Similarity=0.181 Sum_probs=104.7
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
...+.|+++.+|.++...+...........++.++.++++||+ |+||.+.++.++..++.+++.+..
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~~~~~~~~~------------ 315 (448)
T PRK09848 249 ASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCGYLLFFWVS------------ 315 (448)
T ss_pred hhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcC------------
Confidence 3455677777888777666555554566778889999999998 999999999999998887665421
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
..+.+.+++...+.++|.+...+...++.+|..+.++-+..+++.+.+++.+.+...+|..++..+.+++.
T Consensus 316 ---------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 316 ---------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11345566777889999999999999999998765432111123577888888999999999988888765
Q ss_pred cc
Q 045901 168 DN 169 (171)
Q Consensus 168 ~~ 169 (171)
+.
T Consensus 387 ~~ 388 (448)
T PRK09848 387 GL 388 (448)
T ss_pred HH
Confidence 43
No 117
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.09 E-value=1.8e-09 Score=91.46 Aligned_cols=135 Identities=12% Similarity=0.051 Sum_probs=104.0
Q ss_pred HHHHHHhhHhhCCCh--------HHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC
Q 045901 8 PNMILYLCREYNMET--------TAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~--------~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~ 79 (171)
.+++.|++ +.|.++ .+.+...+...+...++.++.|+++||+ ||||++.++.++..++..++.....
T Consensus 229 ~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~~~v~~~l~~~~~~--- 303 (418)
T TIGR00889 229 IFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVAWALRFGFFAYGDP--- 303 (418)
T ss_pred HhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCc---
Confidence 34456665 455444 5668888888889999999999999998 9999999999999888766654210
Q ss_pred CCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHH-HHHHHHHHH
Q 045901 80 EKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYY-VSIAAGSML 158 (171)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y-~~~niG~~i 158 (171)
.....+.+++..++.+++.+...+....+++|.+++ ++|++.+++.+ ....+|..+
T Consensus 304 ----------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~-------~~~g~~~g~~~~~~~~lg~~i 360 (418)
T TIGR00889 304 ----------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV-------HIRASAQGLFTLMCNGFGSLL 360 (418)
T ss_pred ----------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHhhHHHH
Confidence 001234566777889999998889989999998753 24789999986 567899999
Q ss_pred HhHHHHhhcccc
Q 045901 159 SATFIVYIQDNL 170 (171)
Q Consensus 159 ~~~~~~~i~~~~ 170 (171)
++.+.+++.|+.
T Consensus 361 Gp~l~G~l~~~~ 372 (418)
T TIGR00889 361 GYILSGVMVEKM 372 (418)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 118
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.07 E-value=2.1e-09 Score=87.88 Aligned_cols=133 Identities=10% Similarity=0.054 Sum_probs=102.4
Q ss_pred ccHHHHHHHhhHh--hCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 5 GLMPNMILYLCRE--YNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 5 gv~~~l~~yl~~~--lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
++..+++.|++++ +|+++.+++.....+.....++.++++++.||+ |+||.+.++.++..++.++....+
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~~~~~l~~~~~------- 229 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAVLLSIGAALTH------- 229 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHcC-------
Confidence 3556799999864 799999999999999999999999999999997 999999999888887765443321
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
... ...+..+.+++.+.+.|...+...+.++++. +..+. +. ....+|.++.|.+
T Consensus 230 ----------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~------~~asa--i~-~~~~~Gg~i~P~l 283 (310)
T TIGR01272 230 ----------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT------SQGSG--IL-CLAIVGGAIVPLL 283 (310)
T ss_pred ----------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHH--HH-HHHHhcchHHHHH
Confidence 111 2235568899999999999988888775422 12333 32 4566889999999
Q ss_pred HHhhccccC
Q 045901 163 IVYIQDNLG 171 (171)
Q Consensus 163 ~~~i~~~~g 171 (171)
.+++.|..|
T Consensus 284 ~G~lad~~g 292 (310)
T TIGR01272 284 QGSLADCLG 292 (310)
T ss_pred HHHHHHhcc
Confidence 999988654
No 119
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.06 E-value=1.8e-09 Score=101.31 Aligned_cols=118 Identities=14% Similarity=0.073 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHH--HHHHHHHHHhhhcCCCCCCcccccccCCCCccchhH
Q 045901 23 TAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIIS--LLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQL 100 (171)
Q Consensus 23 ~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~--~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (171)
...++...++.+...++.+++|+++||+ ||||++.....+. .....+..+.. .++
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~----------------------~s~ 108 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL----------------------NSV 108 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH----------------------hhH
Confidence 4567778889999999999999999998 9999864422222 21211122111 157
Q ss_pred HHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 101 MLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 101 ~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+++.++++|++.++..|...+++.|.++++ ++.++.+++.++.++|.++++.+++++.+..
T Consensus 109 ~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~-------~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~ 171 (1140)
T PRK06814 109 PLLFAALFLMGIHSALFGPIKYSILPDHLNKD-------ELLGANALVEAGTFIAILLGTIIGGLATISG 171 (1140)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHhhHhhcCcc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 78899999999999999999999999999753 2688999999999999999999999987643
No 120
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.06 E-value=2e-09 Score=92.01 Aligned_cols=137 Identities=12% Similarity=0.010 Sum_probs=102.8
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhcc-CchhHHHHHH--HHHHHHHHHHHHhhhcCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCM-GRYPMIGFGC--IISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~-Gr~~~i~~~~--~l~~lg~~ll~~~~~~~~ 79 (171)
+++...+++.|+++ +|+++.+++.+.+...++..++.+++|+++||.. ++|+...++. ++..++.+++....
T Consensus 257 ~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~---- 331 (455)
T TIGR00892 257 FFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG---- 331 (455)
T ss_pred ccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 45666788899864 7999999999999999999999999999999841 3344333333 33333333322221
Q ss_pred CCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 045901 80 EKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS 159 (171)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~ 159 (171)
+.+.+++..++.+++.+...++..+.+.|..+++ ++++.++++....++|.+++
T Consensus 332 -------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~lg~~ig 385 (455)
T TIGR00892 332 -------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ-------RFSSAVGLVTIVECCAVLIG 385 (455)
T ss_pred -------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH-------HHhhHHhHHHHHHHHHHHcc
Confidence 3455667778899999999999999999987532 36888999999999999999
Q ss_pred hHHHHhhcccc
Q 045901 160 ATFIVYIQDNL 170 (171)
Q Consensus 160 ~~~~~~i~~~~ 170 (171)
+.+.+++.+..
T Consensus 386 p~i~G~l~~~~ 396 (455)
T TIGR00892 386 PPLAGRLVDAT 396 (455)
T ss_pred ccceeeeehhc
Confidence 99999887754
No 121
>PRK10504 putative transporter; Provisional
Probab=99.05 E-value=2.2e-09 Score=91.45 Aligned_cols=134 Identities=10% Similarity=-0.042 Sum_probs=103.8
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
...+.|++..+|.++.+++.+.....+...++.++.|+++||+ |||+.+.++.++..++.+++.... .
T Consensus 282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~---~-------- 349 (471)
T PRK10504 282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVSLLFMLVA---L-------- 349 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHhcc---c--------
Confidence 4567788878999999999999999898888889999999998 999999999998887766554421 0
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
....+.+.+..++.+++.+...+..+....+..+++ .++..++++....++|..+++.+.+.+.
T Consensus 350 ---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 350 ---------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN-------LASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred ---------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-------hccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012233445566778888888888888888876542 2577888888999999999988888775
Q ss_pred cc
Q 045901 168 DN 169 (171)
Q Consensus 168 ~~ 169 (171)
+.
T Consensus 414 ~~ 415 (471)
T PRK10504 414 GL 415 (471)
T ss_pred HH
Confidence 54
No 122
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.05 E-value=2.4e-09 Score=89.07 Aligned_cols=130 Identities=12% Similarity=0.113 Sum_probs=93.1
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCch----hHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRY----PMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~----~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+.++++.|++ ++|.|+.+++.+.+.+.....++.++.|.++||+ ||+ |.+.+...+..+ .....
T Consensus 23 ~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~---~~~~~------- 90 (382)
T PRK11128 23 FLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFAV---AFWFG------- 90 (382)
T ss_pred HhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHHH---HHHHh-------
Confidence 4557778885 6799999999999999999999999999999998 984 333332222211 11111
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
.++.+.+++.+.+.+++.+...|...++..|..+ ++++.+++.....++|..+++.
T Consensus 91 ---------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~---------~~~~a~~~~~~~~~lg~~igp~ 146 (382)
T PRK11128 91 ---------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQK---------QIGLDYGKVRLWGSIAFVIGSA 146 (382)
T ss_pred ---------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHHHh---------hccCCcchHHHHHHHHHHHHHH
Confidence 1246777788888999999999988888777521 1344444555566889999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+++++.+++|
T Consensus 147 lgg~l~~~~g 156 (382)
T PRK11128 147 LTGKLVSWFG 156 (382)
T ss_pred HHHHHHHHcC
Confidence 9988877543
No 123
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.04 E-value=8.9e-10 Score=91.89 Aligned_cols=117 Identities=15% Similarity=0.044 Sum_probs=98.2
Q ss_pred CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchh
Q 045901 20 METTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQ 99 (171)
Q Consensus 20 ~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (171)
-+..-+|.+-+.|.+.+.++++..|-+|||| |||+++.+|++...+.+++...+. +
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~-----------------------~ 120 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR-----------------------N 120 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH-----------------------H
Confidence 3556788999999999999999999999999 999999999999999888777765 4
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 100 LMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 100 ~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
+..+.++|++.|+-.|-. ..+-++++|..++++ |...+.....+..+|.++||++++|+.+
T Consensus 121 F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~-------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY-------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh-------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 556777799999988765 556788999987643 4667777778899999999999999876
No 124
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.04 E-value=5e-09 Score=87.19 Aligned_cols=134 Identities=10% Similarity=0.063 Sum_probs=102.6
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
+....++.|++ +.|+++.+.+.+.........+..++.|++.||+ |+|+.+.++.++..++.+++...+
T Consensus 223 ~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~~~~~~~~--------- 291 (382)
T PRK11128 223 AYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRWGLMGSTT--------- 291 (382)
T ss_pred hHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhh---------
Confidence 45667788885 5899999999999988888888889999999998 999999999998888776554432
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHH-HHHHHHHHHHhHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYY-VSIAAGSMLSATFI 163 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y-~~~niG~~i~~~~~ 163 (171)
+.+.+++..++.+++.+...+....+..++ + ++ ++++..+++. ....+|..+++.+.
T Consensus 292 --------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~---~~----~~~~~~~~~~~~~~~~g~~ig~~i~ 349 (382)
T PRK11128 292 --------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-P---GS----EVIRLQALYSALAMGGSIAIMTVLS 349 (382)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C---Hh----hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566777888888888877777666553 2 21 2456666654 45567888999999
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.|..|
T Consensus 350 G~l~~~~g 357 (382)
T PRK11128 350 GFLYQHLG 357 (382)
T ss_pred HHHHHhcc
Confidence 99988654
No 125
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.03 E-value=4.2e-09 Score=87.52 Aligned_cols=134 Identities=15% Similarity=0.079 Sum_probs=98.0
Q ss_pred HHHHHHHhhHhhCCChH---HHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 7 MPNMILYLCREYNMETT---AATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~---~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
.+.++.|..+..+.... ..+.+..+..+...++.+..|+++||+ |||+.+..+.++..++.+++...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-------- 309 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFVQ-------- 309 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHhc--------
Confidence 34566777765443222 234555566677788888999999998 999999999888877766554332
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+.+.+++...+.+++.|...|...+...|..+++ .+++.++++....++|..+++.+.
T Consensus 310 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~g~~~gp~~~ 367 (408)
T PRK09874 310 ---------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ-------IAGRIFSYNQSFRDIGNVTGPLMG 367 (408)
T ss_pred ---------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc-------cceeeehHHHHHHHHHHHhhHHHH
Confidence 2345666777889999998888888877755432 257888888888999999999999
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.++.|
T Consensus 368 G~l~~~~g 375 (408)
T PRK09874 368 AAISANYG 375 (408)
T ss_pred HHHHhhcc
Confidence 99887654
No 126
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.03 E-value=8.9e-09 Score=86.09 Aligned_cols=135 Identities=10% Similarity=-0.065 Sum_probs=104.0
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQM 88 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~ 88 (171)
..|.|+.+++|+++.+.+.......++..++.++.|+++||+ ||||.+.++.++..++.+++......+
T Consensus 237 ~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~~~~~~~~~~---------- 305 (406)
T PRK15402 237 LSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLLLAALATVIS---------- 305 (406)
T ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHcc----------
Confidence 467788888999999999888878888889999999999998 999999999998888887776543110
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
..+...+.++.++.++|.+...+.......+.. ++ ++++....+++..++|..+++.+.+++.+
T Consensus 306 --------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~----~~----~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 306 --------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSS----DV----SKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred --------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc----cc----cccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 113445667788899999888777666543321 11 25778888888888999999999988876
Q ss_pred cc
Q 045901 169 NL 170 (171)
Q Consensus 169 ~~ 170 (171)
+.
T Consensus 370 ~~ 371 (406)
T PRK15402 370 GG 371 (406)
T ss_pred CC
Confidence 54
No 127
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.02 E-value=6.4e-09 Score=84.59 Aligned_cols=140 Identities=14% Similarity=0.170 Sum_probs=94.7
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHH--HHHHHHHHHHHhhhcCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCI--ISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~--l~~lg~~ll~~~~~~~~~~ 81 (171)
+++..+++.|+++++|+++.+++.....+.+...++.++.|+++||..+||+....... ...++...... .+
T Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 306 (379)
T TIGR00881 233 TGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL---NP--- 306 (379)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc---Cc---
Confidence 34556788999999999999999999999999999999999999986344443332221 11111111111 00
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
..+.....+...+.+....+..+.......|..+++ +|++..+++....++|..+++.
T Consensus 307 ---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~g~~~~~~ 364 (379)
T TIGR00881 307 ---------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKK-------AAGTAAGFVGFFAYLGGILAGL 364 (379)
T ss_pred ---------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcc-------hhHHHHHHHHHhhhhhhhhhhh
Confidence 012233344445555555555555566677776532 3788999999999999999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.|+.|
T Consensus 365 ~~g~l~~~~g 374 (379)
T TIGR00881 365 PLGYLADGFG 374 (379)
T ss_pred hHHHHHHhhc
Confidence 9999988764
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.02 E-value=2.6e-09 Score=89.83 Aligned_cols=132 Identities=8% Similarity=0.060 Sum_probs=99.4
Q ss_pred HHHHHhhHhh---CCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 9 NMILYLCREY---NMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 9 ~l~~yl~~~l---g~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
.++.|+.+.+ +.+..+.+.+.+.......++.+++|+++||+ ||||.+.++.++..++.+++.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~---------- 313 (420)
T PRK09528 245 QFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFAT---------- 313 (420)
T ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhcc----------
Confidence 4677776543 56777888889888888899999999999998 999999999998888877765543
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHH-HHHHHHHHHHHHhHHHH
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSW-YYVSIAAGSMLSATFIV 164 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~-~y~~~niG~~i~~~~~~ 164 (171)
+.+.+.....+.+++.+...+....++.|.++++. +.+.+.+ +....++|..+++.+.+
T Consensus 314 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------~a~~~~~~~~~~~~lg~~ig~~~~G 373 (420)
T PRK09528 314 -------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL-------SATIYLVGFQFAKQLGAVFLSTLAG 373 (420)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-------eeeeeeehHHHHHHHHHHHHHHHHH
Confidence 23455566677788877777777777777775322 3444443 45667899999999999
Q ss_pred hhccccC
Q 045901 165 YIQDNLG 171 (171)
Q Consensus 165 ~i~~~~g 171 (171)
++.|..|
T Consensus 374 ~l~~~~G 380 (420)
T PRK09528 374 NLYDSIG 380 (420)
T ss_pred HHHHhhC
Confidence 9988654
No 129
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.01 E-value=3.3e-09 Score=89.49 Aligned_cols=137 Identities=14% Similarity=-0.023 Sum_probs=88.5
Q ss_pred eeccHHHHHHHhhHh-hCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhH-HHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 3 SNGLMPNMILYLCRE-YNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPM-IGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~-lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~-i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
++++..++|.|+++. .++++.+++...........++.+++|+++||+ +|||. +....++..++.. +....
T Consensus 258 ~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~~~~~-~~~~~----- 330 (412)
T TIGR02332 258 LSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAAAGWL-LASAT----- 330 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHHHHHH-HHHhc-----
Confidence 566778999999863 578889999999999999999999999999997 87775 4444444444332 21111
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
. +......+..+.+.|.....+.......|.++ + ++|++.+++.+...++|..+++
T Consensus 331 ----------------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~---~~~~~a~g~~~~~~~~g~~~~p 386 (412)
T TIGR02332 331 ----------------D-HNLIQLLGIIMASMGSFSAMAIFWTTPDQSIS----L---QARAIAIAVINATGNIGSALSP 386 (412)
T ss_pred ----------------C-CHHHHHHHHHHHHHHhhhhhhHHHhhcccccc----h---HHHHHHHHHHHHhhhhhhhhhh
Confidence 0 11112222223333332222222222233332 2 2478999999999999999999
Q ss_pred HHHHhhcccc
Q 045901 161 TFIVYIQDNL 170 (171)
Q Consensus 161 ~~~~~i~~~~ 170 (171)
.+.+.+.+..
T Consensus 387 ~~~g~i~~~~ 396 (412)
T TIGR02332 387 FLIGILKDAT 396 (412)
T ss_pred hhcccccccC
Confidence 9999888754
No 130
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.01 E-value=3.1e-09 Score=96.15 Aligned_cols=112 Identities=17% Similarity=0.110 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHH
Q 045901 26 TNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYS 105 (171)
Q Consensus 26 ~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (171)
........++..++.+++|+++||+ |||+++.++.++..++.+++.+.. +...+++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~-----------------------s~~~ll~ 653 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN-----------------------SESAMIA 653 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc-----------------------cHHHHHH
Confidence 3444556688899999999999997 999999999999998887776543 1233445
Q ss_pred HHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 106 AFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 106 ~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
.+++.++..+...+...++++|.++.+ .|++++++.+...++|+++++.+++++.+
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt~-------~Rgta~Gi~~~~~rlGaiigp~i~g~L~~ 709 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPSD-------KRATAFGFLNALCKAAAVLGILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677777777888899999998642 48999999999999999999998886643
No 131
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.00 E-value=1.1e-08 Score=85.80 Aligned_cols=140 Identities=9% Similarity=0.051 Sum_probs=96.4
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHH-HHHHHHHHHHHHHHHhhhcCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIG-FGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~-~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+++...++|.|++ ++|+++.+++.+.........++.++.|+++||+ ||||.+. .+.+...++.+.+...... .
T Consensus 238 ~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~~~~l~~~~~~--~- 312 (402)
T TIGR00897 238 LFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIFTLALYYIPQH--F- 312 (402)
T ss_pred HHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHHHHc--c-
Confidence 4566677888885 5899999999999999999999999999999997 9988764 3333333333333221100 0
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
.++.+...+...+.+++.+...+ ..+...|. + |+ +|++.+++++...++|..+++.
T Consensus 313 ---------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~---~~----~~g~~~g~~~~~~~lg~~~gp~ 368 (402)
T TIGR00897 313 ---------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-A---PK----HKGAAMSVLNLSAGLSAFLAPA 368 (402)
T ss_pred ---------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-C---cc----hhHHHHHHHHHHHHHHHHHHHH
Confidence 01234445556667777766544 34444443 2 21 3789999999999999999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.|..|
T Consensus 369 i~g~l~~~~g 378 (402)
T TIGR00897 369 IAVLFIGFFG 378 (402)
T ss_pred HHHHHHhhcc
Confidence 9998887543
No 132
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.00 E-value=4.5e-09 Score=86.23 Aligned_cols=130 Identities=12% Similarity=0.050 Sum_probs=95.1
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHH-HHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWT-AATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~-~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
++.+...++.|+++ +|+++.+.+.+..... ....++.+++|+++||+ ||||.+.++.++..++..+...........
T Consensus 225 ~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 225 DSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 45567788899986 9999999998888766 56788899999999998 999999999988887766554432000000
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIA 153 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~n 153 (171)
+ .+ ..+.+.+....++.+++.+...+...++..|..+++. +++.++.++...|
T Consensus 303 --------~-~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~-------~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 --------G-IT---FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF-------GATQMALLSSLSA 355 (356)
T ss_pred --------c-cc---cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc-------cHHHHHHHHHHHh
Confidence 0 00 0134555666678899999999999999999887543 6888887766554
No 133
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.99 E-value=5.5e-09 Score=88.48 Aligned_cols=96 Identities=13% Similarity=0.053 Sum_probs=74.6
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+.++.|+++++|++..+.|++.+.+..+..+++++.|+++||+.+||+.+.++.++..++..+..+.+
T Consensus 22 ~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~----------- 90 (418)
T TIGR00889 22 LVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVT----------- 90 (418)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 378899999999999999999999999999999999999999983447788888887777666554432
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFG 125 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ 125 (171)
+.+.+.+.+.+.+++.+...+...+..
T Consensus 91 ------------~~~~~~~~~~l~~~~~~~~~~~~~~l~ 117 (418)
T TIGR00889 91 ------------TPAGMFPVLLANSLAYMPTIALTNSIS 117 (418)
T ss_pred ------------CHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 345556666677777666666555543
No 134
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.99 E-value=8e-09 Score=87.99 Aligned_cols=141 Identities=12% Similarity=0.105 Sum_probs=88.0
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhcc-CchhHH-HHHHHHHHHHHHHHHHhhhcCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCM-GRYPMI-GFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~-Gr~~~i-~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
++++..++|.|++++.|++..+++.....+.....++.+++|+++||+. +||+.. .....+..++.+++....
T Consensus 269 ~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~----- 343 (452)
T PRK11273 269 RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP----- 343 (452)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc-----
Confidence 3566778999999999999999999988888999999999999999972 333322 222333333333222211
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHH-HH
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSM-LS 159 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~-i~ 159 (171)
..+.....+.+.+++............+..|.++++ ++++..+++....++|.. ++
T Consensus 344 ----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~~g 400 (452)
T PRK11273 344 ----------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK-------AAGTAAGFTGLFGYLGGSVAA 400 (452)
T ss_pred ----------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh-------hhhhHHHHHHHHHHHHHHHhh
Confidence 001222333334444432222222233455666432 378899998888888865 47
Q ss_pred hHHHHhhccccC
Q 045901 160 ATFIVYIQDNLG 171 (171)
Q Consensus 160 ~~~~~~i~~~~g 171 (171)
+.+.+++.|..|
T Consensus 401 ~~v~g~l~~~~g 412 (452)
T PRK11273 401 SAIVGYTVDFFG 412 (452)
T ss_pred hhhHHHHHHHhc
Confidence 888888877543
No 135
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.98 E-value=3.6e-09 Score=85.47 Aligned_cols=129 Identities=17% Similarity=0.202 Sum_probs=105.2
Q ss_pred eccHHHHHHHhhHhhCCC-hHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 4 NGLMPNMILYLCREYNME-TTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s-~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
+.....++.|+.+++|++ ..+++.+.........++.++.|+++||+ |+|+...+......++.+.+.....
T Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------ 295 (352)
T PF07690_consen 223 SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALGLLLLPF------ 295 (352)
T ss_dssp HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHCCSHH------
T ss_pred HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 445677888989999999 89999999999999999999999999997 9998888888888777766544331
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
..+........++.+++.+...+....+..|..+++ ++++..+.+....++|..++|
T Consensus 296 --------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 --------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPE-------YRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp --------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTC-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHCC
Confidence 113455566777899999999999999999987532 378999999999999999886
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.98 E-value=9e-09 Score=85.73 Aligned_cols=130 Identities=10% Similarity=-0.020 Sum_probs=95.3
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHH----HHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMI----GFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i----~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
..++++.|++ ++|+|..+.+.+.+.+.....++.++.|+++||+ ||++.. .++..+..+. +...+
T Consensus 23 ~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~--~~~~~------- 91 (382)
T TIGR00902 23 FLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAA--FSAGA------- 91 (382)
T ss_pred HHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHH--HHHhh-------
Confidence 3567788885 6899999999999999999999999999999998 985433 2222222211 11111
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
++.+.+++.+.+.+.+.+...|...++..|. + +++++.++......++|.++++.
T Consensus 92 ----------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-----~----~~~~~~~g~~~~~~slG~~~g~~ 146 (382)
T TIGR00902 92 ----------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW-----Q----KQFGLDYGKVRLIGSAAFIIGSA 146 (382)
T ss_pred ----------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH-----H----HHcCCCccHHHHHHHHHHHHHHH
Confidence 1467777888888888888888877765442 1 12566788888888999999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.+++|
T Consensus 147 l~g~l~~~~g 156 (382)
T TIGR00902 147 LFGGLIGMFD 156 (382)
T ss_pred HHHHHHHHcC
Confidence 9998887654
No 137
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.97 E-value=5.4e-09 Score=87.91 Aligned_cols=134 Identities=12% Similarity=0.093 Sum_probs=111.0
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+.+.+++++++|+|+.|.++++..-.+...+..+.-|++.||+ |.||...+++++..+-.+.++++...|
T Consensus 33 ~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~~IP~~~~~~a~~~~-------- 103 (417)
T COG2223 33 FSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLLLIPCLGLAFAVTYP-------- 103 (417)
T ss_pred HHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHHHHHHHHHHHHccCC--------
Confidence 44566888899999999999999999999999999999999998 999999999999999888888876322
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+++.+++...+.|++ |...+...++++..||++ +.+.+.+++- .-|+|..+...+.+.+
T Consensus 104 ------------~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~-------~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 104 ------------STWQLLVIGLLLGLA-GASFAVGMPNASFFFPKE-------KQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred ------------chHHHHHHHHHHhcc-cceehcccccccccCChh-------hhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 345677777788888 555677778888988653 3689999988 8899999988888877
Q ss_pred cccc
Q 045901 167 QDNL 170 (171)
Q Consensus 167 ~~~~ 170 (171)
...+
T Consensus 163 ~~~~ 166 (417)
T COG2223 163 AVAF 166 (417)
T ss_pred HHHH
Confidence 6543
No 138
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.97 E-value=2.1e-08 Score=83.82 Aligned_cols=138 Identities=12% Similarity=0.014 Sum_probs=94.2
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.++..++.|++..+++.......+...++.+++|+++||+ |||+.+.++.++..++.+++.+... +...+
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------- 376 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGA-SFVTG-------- 376 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhh-cccCC--------
Confidence 3444457899999999999999999999999999999998 9999999998888888776653221 10000
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcc-ccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGG-SIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G-~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
++. . ..........+...+.+ +..+....+..|.++++ +|++...+.....++|.++++.+.+++.++
T Consensus 377 --~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 377 --SSK-S-SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS-------LRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred --ccc-c-hhHHHHHHHHHHHHHHHccccCeehhhhhccCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 0 01222222223222222 23456666668877532 368889999999999999999998888765
No 139
>PRK09669 putative symporter YagG; Provisional
Probab=98.96 E-value=6.6e-09 Score=88.27 Aligned_cols=134 Identities=13% Similarity=0.200 Sum_probs=97.9
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhh----ccCch-hHHHHHHHHHHHHHHHHHHhhhcCCC
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADS----CMGRY-PMIGFGCIISLLGMVLLWFTAIFPQE 80 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr----~~Gr~-~~i~~~~~l~~lg~~ll~~~~~~~~~ 80 (171)
+..+++.|+++.+|+|+.+++.+..+..+...+.-++.|+++|| + ||| +.++.+.+...+...++.. .|..
T Consensus 28 ~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i~~~l~f~---~p~~ 103 (444)
T PRK09669 28 VMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGVVCLLTFY---TPDF 103 (444)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHHHHHHHHh---CCCC
Confidence 45678999999999999999999999999999999999999999 5 774 5565777777776654432 2221
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
.+ ..+...+++...+..++......+..++.+|..++ ++ +|.+...+.....++|..+++
T Consensus 104 ~~--------------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~--~~----eR~~l~~~r~~~~~~G~~i~~ 163 (444)
T PRK09669 104 GA--------------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITND--PR----ERHSLQSWRFALSFIGGLIVS 163 (444)
T ss_pred Cc--------------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCC--HH----HHHHHHHHHHHHHHHHHHHHH
Confidence 10 12345555555666777777888888999997643 32 267777888788888877766
Q ss_pred HHH
Q 045901 161 TFI 163 (171)
Q Consensus 161 ~~~ 163 (171)
.+.
T Consensus 164 ~~~ 166 (444)
T PRK09669 164 VIA 166 (444)
T ss_pred HHH
Confidence 543
No 140
>PRK09669 putative symporter YagG; Provisional
Probab=98.96 E-value=6.9e-09 Score=88.13 Aligned_cols=127 Identities=16% Similarity=0.121 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHH
Q 045901 23 TAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLML 102 (171)
Q Consensus 23 ~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (171)
...+.+.....+...++.++.++++||+ |||+.+..+.++..+..+.+.+.. +++.+.
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 321 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFIP---------------------PSNVWL 321 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhC---------------------cchHHH
Confidence 3344455555677778888999999997 999999988877665443332211 114455
Q ss_pred HHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Q 045901 103 LYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNLG 171 (171)
Q Consensus 103 ~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~g 171 (171)
+++..++.+++.+...+...++++|..+.++.+..+++.+..++.+.+..++|..+++.+.+++.+..|
T Consensus 322 ~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 322 IFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 677778899999999999999999988754322111234667888888999999999999988876543
No 141
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.95 E-value=7.3e-09 Score=88.93 Aligned_cols=133 Identities=8% Similarity=0.082 Sum_probs=96.5
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhh----hccCc-hhHHHHHHHHHHHHHHHHHHhhhcCC
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLAD----SCMGR-YPMIGFGCIISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laD----r~~Gr-~~~i~~~~~l~~lg~~ll~~~~~~~~ 79 (171)
.+..+++.|+++.+|+++..++.+..+.-+...+..++.|+++| |+ || |+-++++.+...++..++... |.
T Consensus 24 ~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~~llf~~---p~ 99 (473)
T PRK10429 24 IVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVLFLLFSA---HL 99 (473)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHHHHHHcC---CC
Confidence 34567899999999999999999999999999999999999999 65 88 666677888877776555321 21
Q ss_pred CCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 045901 80 EKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS 159 (171)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~ 159 (171)
.. .......+++..++..++......+..++++|..++ ++| |.+..++-....++|..+.
T Consensus 100 ~~--------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~--~~e----R~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 100 FE--------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLD--KRE----REQLVPYPRFFASLAGFVT 159 (473)
T ss_pred CC--------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCC--HHH----HHHHHHHHHHHHHHHHHHH
Confidence 10 112334445555677888888999999999997653 332 5667777666667765554
Q ss_pred hH
Q 045901 160 AT 161 (171)
Q Consensus 160 ~~ 161 (171)
..
T Consensus 160 ~~ 161 (473)
T PRK10429 160 AG 161 (473)
T ss_pred HH
Confidence 43
No 142
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.95 E-value=1.8e-08 Score=87.18 Aligned_cols=139 Identities=16% Similarity=0.123 Sum_probs=96.0
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHH-HHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLF-IWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~-~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
.....++|+.+++|+++.+.+.+.. ...+...++.+++|+++||+ ||||.+.++.++..++.+........
T Consensus 241 ~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l~~~------- 312 (491)
T PRK11010 241 AMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLLSIT------- 312 (491)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 3456778888889999999999875 55578999999999999998 99998887777666655433221100
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
..+...+.+...+..+..|...+...++..|..+++. .++.+++.+...++|..+++.+.+
T Consensus 313 ------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~-------~~t~~gl~~s~~~lg~~~~~~~~G 373 (491)
T PRK11010 313 ------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF-------SATQFALLSALSAVGRVYVGPVAG 373 (491)
T ss_pred ------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0022333344445444445445666777778776543 355677777888999888888899
Q ss_pred hhccccC
Q 045901 165 YIQDNLG 171 (171)
Q Consensus 165 ~i~~~~g 171 (171)
++.|+.|
T Consensus 374 ~l~~~~G 380 (491)
T PRK11010 374 WFVEAHG 380 (491)
T ss_pred HHHHHhC
Confidence 9888654
No 143
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.94 E-value=1.3e-08 Score=86.27 Aligned_cols=140 Identities=14% Similarity=0.077 Sum_probs=86.0
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCc--hhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGR--YPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr--~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+++..++|.|+++++|++..+++.....+.++..++.+++|+++||+..| ++......+...+....+.. .+.
T Consensus 260 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~-- 334 (434)
T PRK11663 260 AAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL---MPF-- 334 (434)
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH---ccc--
Confidence 34566789999889999999999999999999999999999999997322 22222221111112111111 111
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
. +........++++++.....+......+|.+++ +.+++..++.+...++|..+++.
T Consensus 335 ---------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~~p~ 391 (434)
T PRK11663 335 ---------------A-SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHK-------EAAGAATGFVGLFAYLGAALSGY 391 (434)
T ss_pred ---------------c-cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccH-------hhHHhHHHHHHHHHHHHHHHhcc
Confidence 0 111122222223322211111223344565432 23789999999999999999999
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.|..|
T Consensus 392 ~~g~l~~~~g 401 (434)
T PRK11663 392 PLAKVLEIWH 401 (434)
T ss_pred cHHHHHHhcc
Confidence 9999887543
No 144
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.93 E-value=2.4e-08 Score=86.35 Aligned_cols=143 Identities=17% Similarity=0.157 Sum_probs=111.8
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCch--hHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRY--PMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~--~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
.+..+..+|.++++|+++.+...+.....+.+.++.++.|++.||+ |.| +++.++.++..+-.+.-.+ ...+....
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~~~i~~~g~~-G~~~~~~g 376 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILWIIIPLYGLF-GFWPSFFG 376 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHHH-HhhhcccC
Confidence 4566778999999999999999999999999999999999999998 999 8888888777433222211 11111000
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
.++.+.+++.-++.|+..|..++..-++.++..|+++ ...+|+.|...-...+.+||.+
T Consensus 377 --------------~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~-------e~efFgly~i~gk~ss~lGPll 435 (477)
T PF11700_consen 377 --------------LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR-------EAEFFGLYAITGKASSWLGPLL 435 (477)
T ss_pred --------------cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch-------hhHHHHHHHHHHHHHHHHHHHH
Confidence 1134556666678999999999999999999987643 4789999999999999999999
Q ss_pred HHhhcccc
Q 045901 163 IVYIQDNL 170 (171)
Q Consensus 163 ~~~i~~~~ 170 (171)
.+.+.+..
T Consensus 436 ~g~i~~~t 443 (477)
T PF11700_consen 436 FGLITDAT 443 (477)
T ss_pred HHHHHHHh
Confidence 99887753
No 145
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.93 E-value=2.9e-08 Score=83.14 Aligned_cols=132 Identities=13% Similarity=0.092 Sum_probs=99.1
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc----cCchh-HHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC----MGRYP-MIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~----~Gr~~-~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
..-+|.|+++ .|+|.++.+.+...... .+..++.|+++||+ +|||| .+.++.++..++...+.+.. +
T Consensus 19 ~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~--~--- 90 (402)
T PRK11902 19 SGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP--P--- 90 (402)
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC--c---
Confidence 3467889985 59999999999665554 68889999999997 26765 68888888887777665532 0
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
..+.+.+++..++.+...+...+...++..|..+++ +|+++..+...+.++|.+++..
T Consensus 91 ---------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~-------~r~~~~~~~~~g~~~g~i~g~~ 148 (402)
T PRK11902 91 ---------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE-------ERGAGAAVKVLGYRLAMLVSGG 148 (402)
T ss_pred ---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh-------hhhHHHHHHHHHHHHHHHHHhH
Confidence 124555555555677888889999999999987542 2678888888888899998888
Q ss_pred HHHhhcc
Q 045901 162 FIVYIQD 168 (171)
Q Consensus 162 ~~~~i~~ 168 (171)
+..++.+
T Consensus 149 l~~~l~~ 155 (402)
T PRK11902 149 LALWLAD 155 (402)
T ss_pred HHHHHHh
Confidence 7777655
No 146
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.93 E-value=1.6e-08 Score=88.38 Aligned_cols=127 Identities=14% Similarity=0.085 Sum_probs=105.3
Q ss_pred hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCcc
Q 045901 17 EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESAT 96 (171)
Q Consensus 17 ~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (171)
++.-|+...+.+.........+..+++|.++||+ .|||.++.+.++..+..+++.+......
T Consensus 39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~~l~~~~~----------------- 100 (524)
T PF05977_consen 39 QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLAVLAFFGL----------------- 100 (524)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHHHHHHhCc-----------------
Confidence 6678899999999999999999999999999998 9999999999998877766665442111
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 97 ASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 97 ~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
.+.+.+++..++.+++.++..|.-.+.+.|..+++ +..++..+.....|+..++||.+++.+...
T Consensus 101 -~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~-------~L~~A~al~s~~~niar~iGPalgG~Lva~ 165 (524)
T PF05977_consen 101 -LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE-------DLPAANALNSISFNIARIIGPALGGILVAF 165 (524)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh-------hHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 14566777778999999999999999999998643 267788888899999999999888876543
No 147
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.92 E-value=3.8e-09 Score=89.05 Aligned_cols=128 Identities=14% Similarity=0.140 Sum_probs=112.7
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.+++.++.++|.+|.|.+.+++.++.-++-.+.|.++||. ++|+.+-+++++..+..+++.+++
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~nil~Gfs~--------------- 115 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVNILFGFSP--------------- 115 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHHHHHhhhh---------------
Confidence 3667778889999999999999999999999999999998 999999999999999999888765
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH--Hhhcc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI--VYIQD 168 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~--~~i~~ 168 (171)
+...+.+-..+-|.-+|.-.|++.-.++..++.++ |++...++..+-|+|..+.+.++ +++..
T Consensus 116 --------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e-------RG~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 116 --------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE-------RGTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred --------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc-------cCceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 46667777789999999999999999999997532 79999999999999988888877 66654
Q ss_pred c
Q 045901 169 N 169 (171)
Q Consensus 169 ~ 169 (171)
+
T Consensus 181 ~ 181 (448)
T COG2271 181 H 181 (448)
T ss_pred c
Confidence 3
No 148
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.92 E-value=2.8e-08 Score=82.76 Aligned_cols=142 Identities=15% Similarity=0.089 Sum_probs=96.5
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHH-HHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTA-ATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
......++|+++ .|+++++.+.+...... ...++.+++|++.||+ |+||.+.++.++..+..++.......+ ..+
T Consensus 226 ~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~- 301 (390)
T TIGR02718 226 SGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSLALLWFAQAAFW-LAP- 301 (390)
T ss_pred HHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHcc-cCC-
Confidence 345567788875 79999999999887764 5667788999999998 999999988877644433222211000 000
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
..........+.+++.|...+...+...+..++++ .+++.+.+.....++|..+++.+.
T Consensus 302 ---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~lg~~~g~~~~ 360 (390)
T TIGR02718 302 ---------------GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD------QAGTDVTAVQSTRDLGELIASSIA 360 (390)
T ss_pred ---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc------chHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222333334455666677777777777654311 257888888888899999999999
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.|..|
T Consensus 361 G~l~~~~G 368 (390)
T TIGR02718 361 GYLTDRFG 368 (390)
T ss_pred HHHHHHHc
Confidence 99988654
No 149
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.91 E-value=3.1e-08 Score=82.43 Aligned_cols=131 Identities=12% Similarity=0.070 Sum_probs=90.6
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
..+++|+++.+|+++.+++.+.....+...++.++.|++.||+ ||||.+.++..+..++.+++....
T Consensus 220 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~~~------------ 286 (382)
T PRK10091 220 SYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFFFG------------ 286 (382)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHHHH------------
Confidence 4467788888999999999999999999999999999999997 999999999988888875553321
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+ +.+...+..++.+.|.+...+.......+... +++ .++.. ......++|..+++.+.+++.
T Consensus 287 ---------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~---~~~~~--~~~~~~~~g~~~Gp~~~G~l~ 348 (382)
T PRK10091 287 ---------G-MKTASLIFAFICCAGLFALSAPLQILLLQNAK---GGE---LLGAA--GGQIAFNLGSAIGAYCGGMML 348 (382)
T ss_pred ---------h-hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCC---cch---HHHHH--HHHHHHHHHHHHHHHHhHHHH
Confidence 0 12333444445556555544444433333322 111 12332 224567899999999999887
Q ss_pred cc
Q 045901 168 DN 169 (171)
Q Consensus 168 ~~ 169 (171)
|+
T Consensus 349 ~~ 350 (382)
T PRK10091 349 TL 350 (382)
T ss_pred Hc
Confidence 74
No 150
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.91 E-value=3.9e-08 Score=80.74 Aligned_cols=136 Identities=12% Similarity=0.183 Sum_probs=96.4
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
+.....+.|+++++|+++.+++.+.....+...++.++.|++.||+ |||+.+..+.++..++.+++......+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 296 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLEITAILG------ 296 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 3444567788889999999999999999999999999999999998 999999999888888877665543110
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHHHHhHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIA-AGSMLSATFI 163 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~n-iG~~i~~~~~ 163 (171)
......+.....+.++|.+...+.......|..++ ++++..+.+..... +|++.++. .
T Consensus 297 ------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~g~i~~~~-~ 355 (385)
T TIGR00710 297 ------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH--------VAGTASALFGTLRLVLGAIVGYL-V 355 (385)
T ss_pred ------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc--------cchHHHHHHHHHHHHHHHHHHHH-H
Confidence 01233444556678888888888887777665431 14566666555554 45555554 4
Q ss_pred Hhhcc
Q 045901 164 VYIQD 168 (171)
Q Consensus 164 ~~i~~ 168 (171)
+.+.+
T Consensus 356 ~~~~~ 360 (385)
T TIGR00710 356 SLIHG 360 (385)
T ss_pred Hhccc
Confidence 44444
No 151
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.91 E-value=7.3e-09 Score=87.15 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=100.9
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
|-|....++.|++++++.++.+++.....+.....+..++||+||||+ |++|.+.+......++..++.... +....
T Consensus 234 Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~~~~~l~~~~--~~~~~ 310 (417)
T COG2223 234 FVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMALAAALLSLFL--TGFGH 310 (417)
T ss_pred HHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHHHHHHHHccc--ccccc
Confidence 456778899999999999999999999999999999999999999998 888888888888888877665532 11000
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
+.+...+....+.+.+..|.-+..+..++...++++ .+...++.-...++|.+.=|..
T Consensus 311 --------------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~--------~G~v~G~vga~G~lGGf~lp~~ 368 (417)
T COG2223 311 --------------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE--------TGAVTGIVGAIGGLGGFFLPLA 368 (417)
T ss_pred --------------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh--------hhHHHHHHHHhccccccchhHH
Confidence 113344444455566666666666677776776431 4566666666666766555555
Q ss_pred HHhhcc
Q 045901 163 IVYIQD 168 (171)
Q Consensus 163 ~~~i~~ 168 (171)
.+...+
T Consensus 369 ~g~~~~ 374 (417)
T COG2223 369 FGVSLD 374 (417)
T ss_pred HHHHHH
Confidence 555544
No 152
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.91 E-value=3.3e-08 Score=83.66 Aligned_cols=137 Identities=13% Similarity=-0.017 Sum_probs=85.6
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
+|+...++|.|+++++|++..+++...........+..++.|+++||+ ||||.+.++.++..+......... +.
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~--~~--- 332 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL--QN--- 332 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH--Hc---
Confidence 567778899999989999999999888887778888888999999997 999988877665443332221111 00
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHH-HHHHHhH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAA-GSMLSAT 161 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~ni-G~~i~~~ 161 (171)
..+.........+.....+...+...++.+|.++++. |++.+++.|...++ ....++.
T Consensus 333 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~-------r~t~~g~~~~~g~~~~g~~~p~ 391 (432)
T PRK10406 333 --------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV-------RALGVGLSYAVANALFGGSAEY 391 (432)
T ss_pred --------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc-------cchhhhHHHHHHHHHHHhHHHH
Confidence 0011111111112222333334456677889997532 67888877655453 2233555
Q ss_pred HHHhh
Q 045901 162 FIVYI 166 (171)
Q Consensus 162 ~~~~i 166 (171)
+.+++
T Consensus 392 ~~~~l 396 (432)
T PRK10406 392 VALSL 396 (432)
T ss_pred HHHHH
Confidence 55554
No 153
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.89 E-value=1.5e-08 Score=87.24 Aligned_cols=135 Identities=11% Similarity=0.099 Sum_probs=101.9
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccC-----chhHHHHHHHHHH-HHHHHHHHhhhcCCC
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMG-----RYPMIGFGCIISL-LGMVLLWFTAIFPQE 80 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~G-----r~~~i~~~~~l~~-lg~~ll~~~~~~~~~ 80 (171)
...+..++++++|+|+++.+...+.......+-++ .|+++||+ + ||+.++++.++.. +.. ..++.
T Consensus 45 ~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~~~~~~--~~l~~----- 115 (468)
T TIGR00788 45 RLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLGSAILY--GLLPG----- 115 (468)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHHHHHHH--Hhccc-----
Confidence 44567888889999999999999999999998775 99999998 8 7888888876653 222 11111
Q ss_pred CCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 045901 81 KPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSA 160 (171)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~ 160 (171)
. ++......+.+.+.+++.+.......++..|..+ ++++ ..+....+.|...++|.++++
T Consensus 116 ~---------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~----~~~~~~s~~~~~~~~G~~vg~ 175 (468)
T TIGR00788 116 K---------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS----AGPSLVSWMWGASATGGLISS 175 (468)
T ss_pred c---------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC----cCCCeeeHHHHHHHHHHHHHH
Confidence 0 1122233346778999999999999999999998 3332 245677788888999999999
Q ss_pred HHHHhhcccc
Q 045901 161 TFIVYIQDNL 170 (171)
Q Consensus 161 ~~~~~i~~~~ 170 (171)
.+++++.++.
T Consensus 176 ~l~G~l~~~~ 185 (468)
T TIGR00788 176 LLGGPLLDKT 185 (468)
T ss_pred HHHHHHHHhc
Confidence 9999888754
No 154
>PRK10133 L-fucose transporter; Provisional
Probab=98.89 E-value=1.4e-08 Score=86.53 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=96.3
Q ss_pred ccHHHHHHHh-hHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 5 GLMPNMILYL-CREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 5 gv~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.||+ ||||++..+.++..++.++..+..
T Consensus 276 ~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~-------- 346 (438)
T PRK10133 276 ACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLISAFAG-------- 346 (438)
T ss_pred HHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 3455778886 567899999999999999999999999999999998 999999999887776655443321
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
.. .-..+..+.++|.+.+.|+..+...|.++++.. ..+.... . ..+|..+++.+.
T Consensus 347 ---------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~------~as~l~~--~-~~~g~~~~~~i~ 401 (438)
T PRK10133 347 ---------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTK------YGSSFIV--M-TIIGGGIVTPVM 401 (438)
T ss_pred ---------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhc------cchhHHh--H-HhccchHHHHHH
Confidence 11 124556789999999999999999998764321 1222221 2 224666667778
Q ss_pred Hhhcccc
Q 045901 164 VYIQDNL 170 (171)
Q Consensus 164 ~~i~~~~ 170 (171)
+++.|..
T Consensus 402 G~l~~~~ 408 (438)
T PRK10133 402 GFVSDAA 408 (438)
T ss_pred HHHHHhc
Confidence 8877654
No 155
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.89 E-value=2e-08 Score=86.78 Aligned_cols=109 Identities=13% Similarity=0.144 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHH
Q 045901 25 ATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLY 104 (171)
Q Consensus 25 a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (171)
-+.+++++.++.+++.+++|+++||+ |||+.++++.++..++.+++.++... ....++.
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~--------------------~~~e~li 120 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA--------------------PSFEMLI 120 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHH
Confidence 35678889999999999999999998 99999999999999999888777532 2567899
Q ss_pred HHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 105 SAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 105 ~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
+||++.|+..|......+-++.|.-|++ .|+..-.....+.++|.+++..
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~-------~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKN-------LRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhh-------hccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999976532 3677777777888888888854
No 156
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.88 E-value=6.4e-08 Score=81.19 Aligned_cols=135 Identities=13% Similarity=0.054 Sum_probs=93.1
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
+...++++++.+++|+++.+++.+......+..++.++.|++.||. +|+ .+..+.++..+...++....
T Consensus 234 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~~~~l~~~~--------- 302 (394)
T PRK10213 234 AFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVSALVLTLWG--------- 302 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHHHHHHHHHh---------
Confidence 3344454444567899999999999999999999999999999995 544 44444444333333332221
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
.+.+.+.+...+.|++.+...+..+..+.+..+++ .++..+..+...++|..+|+.+.+
T Consensus 303 -------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~lg~~~G~~l~G 361 (394)
T PRK10213 303 -------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ--------AEKAGSIQVAVIQLANTCGAAIGG 361 (394)
T ss_pred -------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc--------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12445566677889999999998888888776421 233444555677899999999999
Q ss_pred hhccccC
Q 045901 165 YIQDNLG 171 (171)
Q Consensus 165 ~i~~~~g 171 (171)
++.|..|
T Consensus 362 ~l~~~~g 368 (394)
T PRK10213 362 YALDNIG 368 (394)
T ss_pred HHHhccC
Confidence 9988654
No 157
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.85 E-value=1.6e-08 Score=85.33 Aligned_cols=139 Identities=17% Similarity=0.155 Sum_probs=92.6
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhcc-CchhHHHHHHHHHH-HHHHHHHHhhhcCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCM-GRYPMIGFGCIISL-LGMVLLWFTAIFPQEK 81 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~-Gr~~~i~~~~~l~~-lg~~ll~~~~~~~~~~ 81 (171)
||+..+.|+|+.+..|+|..+++...+.|-.+...+++++||+|||++ |||....+...+.. +..+....++
T Consensus 269 ~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~------ 342 (448)
T COG2271 269 YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAP------ 342 (448)
T ss_pred HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCC------
Confidence 678899999999999999999999999999999999999999999998 77776654444333 3333222221
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHH-HHHHHh
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAA-GSMLSA 160 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~ni-G~~i~~ 160 (171)
+++..+..+.++.+|+-.-+-.-.+-....|..+++ ..+++-+..-+.-.+ |+..+.
T Consensus 343 ---------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~-------AaGtA~Gf~Glf~Yl~Ga~~a~ 400 (448)
T COG2271 343 ---------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK-------AAGTATGFVGLFAYLIGAALAG 400 (448)
T ss_pred ---------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh-------hccchhchhhhHHHHhhHHhcC
Confidence 123455555555555555444333333334543321 245666655455555 788887
Q ss_pred HHHHhhcccc
Q 045901 161 TFIVYIQDNL 170 (171)
Q Consensus 161 ~~~~~i~~~~ 170 (171)
...+++.|..
T Consensus 401 ~~~g~i~d~~ 410 (448)
T COG2271 401 LPLGYIADTW 410 (448)
T ss_pred CcceeeEecC
Confidence 7777776653
No 158
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.85 E-value=1e-07 Score=81.09 Aligned_cols=126 Identities=12% Similarity=0.040 Sum_probs=90.3
Q ss_pred hhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCC
Q 045901 14 LCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCE 93 (171)
Q Consensus 14 l~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
+.++.|++...+........+...++.+++|+++||+ |||+.+..+.++..++.+++..... +.
T Consensus 297 i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~-~~-------------- 360 (479)
T PRK10077 297 IFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY-TQ-------------- 360 (479)
T ss_pred HHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHh-cC--------------
Confidence 3357889888777777777888899999999999998 9999999999999998877754321 00
Q ss_pred CccchhHHHHHHHHHHHHHhccc-cccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 94 SATASQLMLLYSAFGLMSLGGGS-IRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 94 ~~~~~~~~~~~~~l~l~g~g~G~-~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
. ........+++.+.+.+. ..|....++.|.++++ +|+++.++.+...++|..+++.+.+.+
T Consensus 361 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 361 ---A-PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA-------IRGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred ---c-ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChh-------HHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0 112233344445555543 3477788889987532 378899998888888888876555543
No 159
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.85 E-value=3.7e-08 Score=92.13 Aligned_cols=131 Identities=13% Similarity=0.081 Sum_probs=104.2
Q ss_pred ccHHHHHHHhhHhhCCChH-HHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 5 GLMPNMILYLCREYNMETT-AATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~-~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
.....++.|+.+.+|+++. +++.+.....++..++.++.|+++||+ ++++.+.++.++..++.+++.+..
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~-------- 320 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSLFLLPTAP-------- 320 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHHHHHHHhh--------
Confidence 3455678899999999999 999999999999999999999999998 999999988888887776665432
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+.+.+++..++.+++.+...+...+++.+..+++ .|++++++..+..++|.++++.+.
T Consensus 321 ---------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~-------~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 321 ---------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEK-------ELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCcc-------chhhhhHHHHHHHHHHHHHHHHHH
Confidence 3455667778889999998888888888876542 267888888888888877666555
Q ss_pred Hhh
Q 045901 164 VYI 166 (171)
Q Consensus 164 ~~i 166 (171)
+.+
T Consensus 379 ~~l 381 (1146)
T PRK08633 379 TLF 381 (1146)
T ss_pred HHH
Confidence 443
No 160
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.4e-07 Score=79.48 Aligned_cols=138 Identities=19% Similarity=0.120 Sum_probs=102.5
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+.|.....+-+|+++.-|+|....+.+...|.++..++.+++|+++|| +.|+++.....+..+..+.+.+..
T Consensus 226 g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~~------ 297 (394)
T COG2814 226 GHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFTG------ 297 (394)
T ss_pred chhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHhc------
Confidence 457788889999999999999999999999999999999999999999 788899998888888877766543
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
.+.+...+...+.++..+ |..+.+..+.-+ ..|+ .++....++...+|+|...|..
T Consensus 298 ----------------~~~~~~~~~~~~wg~a~~---~~~~~~~~~~a~-~~p~----~~~~a~sl~~aa~nlgia~GA~ 353 (394)
T COG2814 298 ----------------ASPALALALLFLWGFAFS---PALQGLQTRLAR-LAPD----AADLAGSLNVAAFNLGIALGAA 353 (394)
T ss_pred ----------------chHHHHHHHHHHHHHHhh---hhhhHHHHHhcc-cCCC----chHHHHHHHHHHHHHHHHHHHH
Confidence 123344444444444443 333333344333 2232 2466777777889999999998
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+++.+.|+.|
T Consensus 354 lGG~v~~~~g 363 (394)
T COG2814 354 LGGLVLDALG 363 (394)
T ss_pred HHHHHHHhhc
Confidence 8888888754
No 161
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.81 E-value=5.2e-08 Score=81.93 Aligned_cols=131 Identities=15% Similarity=0.070 Sum_probs=94.6
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
..+|.|+++..+ ++.+.+.+...............+++.||..+.++.+..+.++..++.+++...+
T Consensus 229 ~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~------------ 295 (400)
T PRK11646 229 LMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS------------ 295 (400)
T ss_pred HhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh------------
Confidence 356788876555 6788888877766655544444555555543777778888888888876665432
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+.+.+.+...+.++|.+...|...+...|..+++ ++++.++++....++|..+++.+.+++.
T Consensus 296 -----------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 296 -----------NLQQLFTLICLFYIGSIIAEPARETLSASLADAR-------ARGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcc-------cchhhhhHHHHHHHHHHHhcccchHHHH
Confidence 2344455556788888888899888888877542 2688888888899999999999999987
Q ss_pred cc
Q 045901 168 DN 169 (171)
Q Consensus 168 ~~ 169 (171)
|+
T Consensus 358 ~~ 359 (400)
T PRK11646 358 DL 359 (400)
T ss_pred HH
Confidence 75
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.80 E-value=3.5e-08 Score=83.65 Aligned_cols=141 Identities=12% Similarity=0.044 Sum_probs=86.3
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHH-HHHhhhcCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVL-LWFTAIFPQEKP 82 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~l-l~~~~~~~~~~~ 82 (171)
+++...+|.|+++..|+++.+++.....+.....++.+++|+++||+ +|+|....+..+..+..+. ..+.. .+.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 342 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVTIAVIVYWM-NPA--- 342 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHHHHHHh-cCC---
Confidence 56677889999988999999999999999999999999999999997 7554333343322222111 11110 010
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHH-HHHHhH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAG-SMLSAT 161 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG-~~i~~~ 161 (171)
.+.+.....+++.+.+..+..........|.++++ .|+++.++++...++| .++++.
T Consensus 343 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~gg~~~gp~ 400 (438)
T TIGR00712 343 ---------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK-------AAGTAAGFTGLFGYLGGSVAASA 400 (438)
T ss_pred ---------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh-------heeeehhhhchHHHhhhhhhcch
Confidence 01222233333344332222122223445665432 3677888887777876 568898
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.|+.|
T Consensus 401 l~G~l~~~~g 410 (438)
T TIGR00712 401 IVGYTVDFFG 410 (438)
T ss_pred hHHHHHHhcc
Confidence 8888877543
No 163
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.79 E-value=3.8e-08 Score=80.52 Aligned_cols=124 Identities=11% Similarity=0.116 Sum_probs=90.7
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+++...++.|+++++|+++.+++.+.........++.+++|+++||+ ||||.+..+..+...+..++..... +
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~-----~- 314 (366)
T TIGR00886 242 LGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGAFLVVLGLV-----S- 314 (366)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHHHHHHhcCC-----C-
Confidence 45667789999999999999999999999999999999999999998 9999888888777776665544320 0
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAG 155 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG 155 (171)
..+...+.+.+.+..++.|...+...+..+|..++ .+++.+++.....++|
T Consensus 315 -------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 315 -------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR--------ATGAVSGLVGAIGNLG 365 (366)
T ss_pred -------------cchHHHHHHHHHHHHHHhccccchhhhcchhhchh--------hcccHHHHHHHhccCC
Confidence 00234445555666667777777777777787642 2577777666655554
No 164
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.78 E-value=4.8e-08 Score=83.89 Aligned_cols=131 Identities=19% Similarity=0.141 Sum_probs=95.3
Q ss_pred ChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhH
Q 045901 21 ETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQL 100 (171)
Q Consensus 21 s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (171)
++...+.+.....+...++.++.++++||+ ||||++.++.++..++.+.+......+ +.+.
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ 324 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVLSCGVLLLMGLAA------------------PHNA 324 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhccC------------------chhH
Confidence 455566666666678888889999999998 999999999988777766554322111 1134
Q ss_pred HHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 101 MLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 101 ~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.+...+.+++.+...+...++++|..+.++-+..+++.+.++++..+...+|..+++.+.+++.+..
T Consensus 325 ~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 325 LLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5566666788899999999999999998775432111123456788888888999999999888886644
No 165
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.78 E-value=1.5e-10 Score=97.77 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHH
Q 045901 22 TTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLM 101 (171)
Q Consensus 22 ~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (171)
+.+.+.+.+...++..++.+++|+++||+ |||+++.++.++..+|.++..+++.. .+.+
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~--------------------~~~~ 103 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY--------------------NNFW 103 (451)
T ss_pred HHHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc--------------------cccc
Confidence 34578899999999999999999999998 99999999999999999888766410 1467
Q ss_pred HHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 102 LLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 102 ~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
.+.++|++.|+|.|+..+..+.++.|..+++ +|++...+......+|.+++..+.
T Consensus 104 ~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~-------~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 104 MLLIGRFLIGFGIGGAYVVSPIYISEIAPPK-------HRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccccccccccccccccc-------cccccccccccccccccccccccc
Confidence 7889999999999999999999999987543 367777777777888888776543
No 166
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.76 E-value=1.8e-07 Score=80.63 Aligned_cols=145 Identities=12% Similarity=0.147 Sum_probs=92.3
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
-+....+|.|+++++ +...+........+...+..+++||++||+ ||||.+.++.+...+........ +|..
T Consensus 269 vg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~~~~~l~--lp~~--- 340 (462)
T PRK15034 269 IGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFSALLFLT--LPGT--- 340 (462)
T ss_pred HHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHHHHHHHH--hccc---
Confidence 344557888888755 333333334445677888889999999998 99999999998777776543332 2210
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCC----------CCcc----hhhHHHHHHHHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKG----------NGAK----NAGALQSYFSWYY 149 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~----------~~~~----~~~~~~~~~~~~y 149 (171)
...+.+.+.+..+.+.+..|.-+..+..++.+.++++ +++| .+++.+...++..
T Consensus 341 ------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~ 408 (462)
T PRK15034 341 ------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFIS 408 (462)
T ss_pred ------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHH
Confidence 0124566667666667777778888888888877641 1111 0123556667666
Q ss_pred HHHHHHHHHHhHHHHhhcc
Q 045901 150 VSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 150 ~~~niG~~i~~~~~~~i~~ 168 (171)
..-.+|.++-|.+.++..+
T Consensus 409 a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 409 AIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHcccchhhHHHHHHHH
Confidence 6666666666655555544
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.74 E-value=1e-07 Score=79.47 Aligned_cols=132 Identities=8% Similarity=0.066 Sum_probs=90.3
Q ss_pred HHHHHhhHhh---CCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 9 NMILYLCREY---NMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 9 ~l~~yl~~~l---g~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
.++.|+++.+ +.+....+.+.+...+...++.+..|++.||+ ||||.+.++.++..++..+...+.
T Consensus 237 ~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~~~~~---------- 305 (396)
T TIGR00882 237 QFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGSSFAT---------- 305 (396)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHhcC----------
Confidence 4677877665 55667778888888888888889999999998 999999999998888776544332
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHH-HHHHHHHHHHHHhHHHH
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSW-YYVSIAAGSMLSATFIV 164 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~-~y~~~niG~~i~~~~~~ 164 (171)
+.+.++...++.+++.+........+..+..+++ .+...+.. +.....+|..+++.+.+
T Consensus 306 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~at~~~~~~~~~~~lg~~~~~~l~G 365 (396)
T TIGR00882 306 -------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVR-------LSATIYLIGFQFAKQLAMIFLSTLAG 365 (396)
T ss_pred -------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-------eEEEeehHHHHHHHHHHHHHHHHhHH
Confidence 2344455566667665444333333344433321 12333333 44678899999999999
Q ss_pred hhccccC
Q 045901 165 YIQDNLG 171 (171)
Q Consensus 165 ~i~~~~g 171 (171)
++.|..|
T Consensus 366 ~l~~~~G 372 (396)
T TIGR00882 366 NMYDSIG 372 (396)
T ss_pred HHHHhcc
Confidence 9988654
No 168
>PRK09848 glucuronide transporter; Provisional
Probab=98.73 E-value=1.3e-07 Score=80.36 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=90.0
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc---cCchhHH-HHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC---MGRYPMI-GFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~i-~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+..+++.|+++.+|+++.++|.+..+..+...+..++.|+++||. +||||.. .++.+...+...++ +. .|...
T Consensus 27 ~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~-~~--~~~~~ 103 (448)
T PRK09848 27 GALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLV-FW--VPTDW 103 (448)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHH-Hh--CcCCC
Confidence 456788999999999999999999999999999999999999994 3667644 56666555444433 21 11100
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHH-----HHHHHH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYV-----SIAAGS 156 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~-----~~niG~ 156 (171)
+........+....+.+++.+...++..++..+..++ ++| |.+...+-.+ ..+++.
T Consensus 104 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~~----r~~~~~~r~~~~~~~~~~~~~ 164 (448)
T PRK09848 104 -------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQ--PQS----RARLGAARGIAASLTFVCLAF 164 (448)
T ss_pred -------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCC--HHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 0011233445555678888899999888887776653 333 4444444333 234455
Q ss_pred HHHhHHHH
Q 045901 157 MLSATFIV 164 (171)
Q Consensus 157 ~i~~~~~~ 164 (171)
.+++.+.+
T Consensus 165 ~~~p~i~~ 172 (448)
T PRK09848 165 LIGPSIKN 172 (448)
T ss_pred HHHHHHHH
Confidence 55555444
No 169
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.73 E-value=2.2e-07 Score=80.35 Aligned_cols=132 Identities=13% Similarity=0.128 Sum_probs=98.3
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc----cCchhH-HHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC----MGRYPM-IGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~----~Gr~~~-i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
...++.+++ +.|.|..+.+..... ....+..++.|+++||+ +||||. +.++.+...++...+.+.. |
T Consensus 32 ~~~l~~~l~-~~g~~~~~ig~~~~~--~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~--~--- 103 (491)
T PRK11010 32 SGTLQAWMT-VENIDLKTIGFFSLV--GQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE--P--- 103 (491)
T ss_pred HHHHHHHHH-hCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC--C---
Confidence 345666765 459999999886332 22346889999999995 288885 6677777777766665542 1
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
..+.+.+.+.+.+.+++.+...+...++..|.++++ +|+++.++...+.++|.++++.
T Consensus 104 ---------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~-------~rg~~~~i~~~g~~lG~llg~~ 161 (491)
T PRK11010 104 ---------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE-------ERGAGAAISVLGYRLAMLVSGG 161 (491)
T ss_pred ---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh-------hhHHHHHHHHHHHHHHHHHHHH
Confidence 124666777788889999999999999999998632 2688888888899999999988
Q ss_pred HHHhhcc
Q 045901 162 FIVYIQD 168 (171)
Q Consensus 162 ~~~~i~~ 168 (171)
+..++.+
T Consensus 162 l~~~l~~ 168 (491)
T PRK11010 162 LALWLAD 168 (491)
T ss_pred HHHHHHh
Confidence 8887766
No 170
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.73 E-value=3.5e-07 Score=76.71 Aligned_cols=129 Identities=9% Similarity=-0.009 Sum_probs=95.1
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
...++.|+++.+|+++.+++.+.....++..++.++.+++.||+ ++|+.+..+..+ .+..+++....
T Consensus 225 ~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~~----------- 291 (393)
T PRK11195 225 RFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQH----------- 291 (393)
T ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHHh-----------
Confidence 34556788889999999999999999999999999999999997 999988887543 33322222211
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.+...+..++.|++.|...++..+.+.+. + |+| ..+++.....+...+++..++..+.+.+
T Consensus 292 ------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~-~---~~~--~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 292 ------------SLLPAYPLLILIGALGGFFVVPMNALLQHR-G---HVL--VGAGHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred ------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhh-C---ccc--ccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344455666788999998888888777553 2 211 1257788888889999988888777655
No 171
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.72 E-value=4e-08 Score=83.83 Aligned_cols=125 Identities=17% Similarity=0.127 Sum_probs=92.7
Q ss_pred CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchh
Q 045901 20 METTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQ 99 (171)
Q Consensus 20 ~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (171)
+++.-.+.++.+..++..++.++.||++||+ |||+.+...+++..++++++.++.. ++ +....
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~----~~------------~~~~~ 143 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVG----TT------------SPLGV 143 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCC----CC------------CCcch
Confidence 7788899999999999999999999999998 9999999999999999985544321 11 11123
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHH----HHHHHHHHHHHHhHHHHhhcc
Q 045901 100 LMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSW----YYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 100 ~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~----~y~~~niG~~i~~~~~~~i~~ 168 (171)
...+..-|.++|+|.|+-.|...+..+|.-.++ +|+....+ .-+..-.|++++.++..-+++
T Consensus 144 m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~-------~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~ 209 (538)
T KOG0252|consen 144 MMTLCFFRFLLGIGIGGDYPLSATIMSESANKK-------TRGAFIAAVFAMQGFGILAGGIVALIVSAIFEK 209 (538)
T ss_pred hhHHHHHHHHhhccccCCCcchHHHhhhhhhhc-------cccceeEEEEEecchhHhhccHHHHHHHHHHhc
Confidence 456778899999999999999999888875432 34544443 344555666666655554443
No 172
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.71 E-value=7.4e-08 Score=90.51 Aligned_cols=152 Identities=11% Similarity=0.020 Sum_probs=106.9
Q ss_pred eccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 4 NGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 4 ~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+++...+|.|+++.+|.++.+++.+.+.+.++..++.++.|+++|+. ++++.+..+.++..++.+.+.+.. .....+.
T Consensus 242 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 319 (1140)
T PRK06814 242 AVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFGLDLAFAS-SSVPAEP 319 (1140)
T ss_pred HHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHHHHHHhcc-ccccccc
Confidence 34566789999999999999999999999999999999999999997 777777777666665554443320 0000000
Q ss_pred cccccccCCC-CccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 84 VCDQMRSGCE-SATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 84 ~~~~~~~~~~-~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
. ...... .....+.+.++++.+++|++.|...+...+++.+..+++. +++.++.+....++|..+++.+
T Consensus 320 ~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 320 A---QLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH-------RARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred c---cccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc-------ceeeeHHHHHHHHHHHHHHHHH
Confidence 0 000000 0000134566777888999999999999999888876532 6788888888888888888887
Q ss_pred HHhhc
Q 045901 163 IVYIQ 167 (171)
Q Consensus 163 ~~~i~ 167 (171)
.+.+.
T Consensus 390 ~g~l~ 394 (1140)
T PRK06814 390 LALLQ 394 (1140)
T ss_pred HHHHH
Confidence 77775
No 173
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.70 E-value=2.1e-07 Score=80.37 Aligned_cols=139 Identities=20% Similarity=0.124 Sum_probs=88.0
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHH------------HHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHH
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATN------------VLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMV 69 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~------------~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ 69 (171)
.+|++..++|.+++ +.|+++.+++. ..........++.+++++++||+ |||+++.++.++..++..
T Consensus 303 ~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~~~~~~~ 380 (502)
T TIGR00887 303 AFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFILTVLFF 380 (502)
T ss_pred HHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHHHHHHHH
Confidence 35666666777775 67887653321 12223345556778899999998 999999999888887766
Q ss_pred HHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHH
Q 045901 70 LLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYY 149 (171)
Q Consensus 70 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y 149 (171)
++..... +. + ....+............+..+....+.+|.++.+ .|++..++.+
T Consensus 381 ~l~~~~~-~~-----------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~-------~R~~~~g~~~ 434 (502)
T TIGR00887 381 VLGFAYN-HL-----------------S-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTR-------YRSTAHGISA 434 (502)
T ss_pred HHHHHHH-hc-----------------c-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchh-------HHHHHHHHHH
Confidence 6654320 00 0 1111111111122222233455566678888642 4789999999
Q ss_pred HHHHHHHHHHhHHHHhhcc
Q 045901 150 VSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 150 ~~~niG~~i~~~~~~~i~~ 168 (171)
...++|+++++.+.+++.+
T Consensus 435 ~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 435 ASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHhhhHHHHHHHHhhhhhc
Confidence 9999999999999998876
No 174
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.69 E-value=2.2e-07 Score=81.36 Aligned_cols=135 Identities=13% Similarity=0.092 Sum_probs=109.9
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
+...+|.+.++.+|.++..-|.+.+++.++..++.++.+++.+|. ++++.+..+.++..++.+.+.++.
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~lal~~---------- 305 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLLALSP---------- 305 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHHhcch----------
Confidence 455678888899999999999999999999999999999999997 999999999998888777666543
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
+.+..++.+++.|.+.....+..+..+-+..+ + ..+++.+..+....+.+..+|..+.|+
T Consensus 306 -------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P----~---~~~GRv~si~~~~~~g~~~lGsll~G~ 365 (524)
T PF05977_consen 306 -------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVP----D---WVRGRVFSIYQMVFFGGMPLGSLLWGF 365 (524)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----H---HHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777788888888877777766545443 2 248999999888888888888888888
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.+..|
T Consensus 366 la~~~g 371 (524)
T PF05977_consen 366 LADHFG 371 (524)
T ss_pred HHHHhC
Confidence 877654
No 175
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.67 E-value=1.3e-07 Score=81.36 Aligned_cols=127 Identities=12% Similarity=0.075 Sum_probs=78.3
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchh-------HHHHHHHHHHHHHHHHHHhhhc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYP-------MIGFGCIISLLGMVLLWFTAIF 77 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~-------~i~~~~~l~~lg~~ll~~~~~~ 77 (171)
++...++.|+.+++|+++.+++.+...+.+.+.++.+++||++||+ |||+ ...+..++..+.. +.+..
T Consensus 270 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~l~~i~~--~~~~~-- 344 (476)
T PLN00028 270 TMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQTLGGVFC--IWLGR-- 344 (476)
T ss_pred HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHHHHHHHH--HHhcc--
Confidence 3455678999888999999999999999999999999999999997 8762 2222222222111 11111
Q ss_pred CCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 045901 78 PQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSM 157 (171)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~ 157 (171)
..+.....+..++.+++.+...+...+...+.. ++ .++..+++.....++|+.
T Consensus 345 -------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~----~~g~~~g~~~~~g~lg~~ 397 (476)
T PLN00028 345 -------------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVS----RR----SLGVISGLTGAGGNVGAV 397 (476)
T ss_pred -------------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccC----hh----hchhhhhhhhccccHHHH
Confidence 012233344445555555444444444444432 21 267777777666677776
Q ss_pred HHhHHH
Q 045901 158 LSATFI 163 (171)
Q Consensus 158 i~~~~~ 163 (171)
+++.+.
T Consensus 398 i~~~l~ 403 (476)
T PLN00028 398 LTQLLF 403 (476)
T ss_pred HHHHHH
Confidence 666543
No 176
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.66 E-value=7.7e-07 Score=74.53 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=82.3
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHH-HHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWT-AATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~-~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
..+.|+.+++|+++.+.+.+..... ....++.+++|++.||+ ||||.+.++.++..+..+.+......+
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~--------- 300 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTP--------- 300 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcC---------
Confidence 4456777789999999999886654 45788899999999998 999998888877766654443322111
Q ss_pred cccCCCCccchhHHHHHHHHH----HHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 88 MRSGCESATASQLMLLYSAFG----LMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~----l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
.+.+.+.+... ..+++.+...+....++.+.++. +.++++....++|..++..+.
T Consensus 301 ----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~~~ 359 (402)
T PRK11902 301 ----------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA-----------TQYALLSALASVGRVYVGPTS 359 (402)
T ss_pred ----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 02233443333 34445555555555555544321 122343344567776566678
Q ss_pred HhhccccC
Q 045901 164 VYIQDNLG 171 (171)
Q Consensus 164 ~~i~~~~g 171 (171)
+++.|.+|
T Consensus 360 G~l~~~~G 367 (402)
T PRK11902 360 GYLVEAYG 367 (402)
T ss_pred HHHHHHhC
Confidence 88877654
No 177
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.66 E-value=3.6e-07 Score=76.00 Aligned_cols=139 Identities=17% Similarity=0.141 Sum_probs=108.1
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
.||.+..++|.++. +.|+|..+++.+++.....+....+.+-++++|...+|+..+....++.+|..-+.+...
T Consensus 223 ~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~----- 296 (395)
T COG2807 223 LYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG----- 296 (395)
T ss_pred HHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh-----
Confidence 47889999999997 669999999999999999999999999999998889999999999999999988876531
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
+.+..- .+++|+|.|+..|....++.+..++ +++ -.+..++-.-.-.+=+.+||.
T Consensus 297 -----------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~--a~~----Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 297 -----------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSD--AAI----AAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred -----------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCC--hHH----HHHHHHHhhhhhHHHHhhhhh
Confidence 222121 4789999999999999999998754 332 233333322333344566788
Q ss_pred HHHhhccccC
Q 045901 162 FIVYIQDNLG 171 (171)
Q Consensus 162 ~~~~i~~~~g 171 (171)
+.+++.|..|
T Consensus 352 l~G~lhDa~g 361 (395)
T COG2807 352 LFGFLHDATG 361 (395)
T ss_pred hHhHHHHhcC
Confidence 8998887543
No 178
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.65 E-value=3.3e-07 Score=77.50 Aligned_cols=132 Identities=18% Similarity=0.253 Sum_probs=108.8
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
+......|-.+++|++..+..+.-......+.++++++|+|.||+ |.|+++.++.++..+..+...+..
T Consensus 271 il~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~~~~~~~~~---------- 339 (438)
T COG2270 271 ILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIAALYLIFLE---------- 339 (438)
T ss_pred HHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHHHHHHHHcc----------
Confidence 445566788889999999999999999999999999999999997 999999999999998877665432
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
...-+.+.-.++|+..|..++..-.+.++..|+++ -+++|+.|...-...+.+||.+.+.
T Consensus 340 -------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k-------~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 340 -------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK-------EGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred -------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc-------ccceeehhhhhhhHHHHHHHHHHHH
Confidence 11123333468899999999999999999987654 3779999999999999999988776
Q ss_pred hcc
Q 045901 166 IQD 168 (171)
Q Consensus 166 i~~ 168 (171)
+-+
T Consensus 400 ~t~ 402 (438)
T COG2270 400 ITQ 402 (438)
T ss_pred HHH
Confidence 654
No 179
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.63 E-value=8.6e-07 Score=72.96 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=52.6
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHH
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLL 71 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll 71 (171)
..+.++.+++|+++.+++.+.....+...++.+++|+++||+ ||||.+.++.++..+..+.+
T Consensus 216 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~ 277 (377)
T PRK11102 216 AGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWL 277 (377)
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHH
Confidence 345677778999999999999999999999999999999998 99999999888765544433
No 180
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.63 E-value=5.9e-07 Score=74.62 Aligned_cols=93 Identities=14% Similarity=0.107 Sum_probs=80.1
Q ss_pred HhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCc
Q 045901 16 REYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESA 95 (171)
Q Consensus 16 ~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 95 (171)
+++|+++.|.+.+..+-...+.+...+.|.++||+ ||||.-++.++++.+..+... .+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~~-------------------- 119 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-SS-------------------- 119 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-cc--------------------
Confidence 57899999999999999999999999999999998 999999999999998886332 11
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCC
Q 045901 96 TASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGN 133 (171)
Q Consensus 96 ~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~ 133 (171)
++..+++||++-|+++-....+-.+......++.+
T Consensus 120 ---~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g 154 (354)
T PF05631_consen 120 ---NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRG 154 (354)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 47889999999999999999999988877665443
No 181
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.62 E-value=9.5e-07 Score=73.44 Aligned_cols=64 Identities=8% Similarity=0.034 Sum_probs=56.7
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFT 74 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~ 74 (171)
.+.|+++++|+++.+.+.+.........++.++.|++.||+ ||||.+.++.++..++.+++.+.
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788999999999999999999999999999999998 99999999999888888776654
No 182
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.61 E-value=1.8e-07 Score=76.14 Aligned_cols=126 Identities=16% Similarity=0.200 Sum_probs=99.3
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHH-HHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCII-SLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l-~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
+.|+++++|+|+..++.+.+.....+.+.+++.|.++|++ ||+-..+.+..+ ..++...+.++.
T Consensus 288 ~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~~tl~~H~~l~Ft~-------------- 352 (459)
T KOG4686|consen 288 PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACILTLLGHSGLFFTF-------------- 352 (459)
T ss_pred HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHHHHHHHhhhHHhhh--------------
Confidence 5788999999999999999999999999999999999998 999877765544 444555554442
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
+.-+++..++|+.........-|.++-..+++ +.+++|+..+..-|+|-.+.+++.+++.|.
T Consensus 353 -----------lsPy~~m~~lGLsysllAcslWP~va~~vpE~-------qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 353 -----------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEE-------QLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred -----------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH-------HhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 22356667777776666555677777776542 389999999999999999999999998874
No 183
>PRK11462 putative transporter; Provisional
Probab=98.60 E-value=1.1e-06 Score=75.59 Aligned_cols=134 Identities=18% Similarity=0.243 Sum_probs=100.1
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhh---ccCchhHHH-HHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADS---CMGRYPMIG-FGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr---~~Gr~~~i~-~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
..++..|+++.+|+++..++.+..+.-+.-.+.-++.|+++|| .+||||-.+ ++.+...++..++.. .|...+
T Consensus 29 ~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~---~p~~s~ 105 (460)
T PRK11462 29 MLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYS---TPDLSM 105 (460)
T ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHh---CCCCCc
Confidence 4478899999999999999999999999999999999999997 248875554 676777777655432 222111
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
......+.+...+..++.-....+..++.+|..++ ++ +|.+...|.....++|.++++.+
T Consensus 106 --------------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~----eRt~l~s~r~~~~~iG~~~~~~~ 165 (460)
T PRK11462 106 --------------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND--PT----QRISLQSWRFVLATAGGMLSTVL 165 (460)
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC--HH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 12233445555677888889999999999998764 33 37888888888888887776554
Q ss_pred H
Q 045901 163 I 163 (171)
Q Consensus 163 ~ 163 (171)
.
T Consensus 166 ~ 166 (460)
T PRK11462 166 M 166 (460)
T ss_pred H
Confidence 4
No 184
>PRK10054 putative transporter; Provisional
Probab=98.60 E-value=2.8e-07 Score=77.37 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=95.6
Q ss_pred HHHHHhhH--hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 9 NMILYLCR--EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 9 ~l~~yl~~--~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.++.|+.. +.+.+....+.+............+..|++.||+ +||+.+..+.++..++...+.++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~----------- 295 (395)
T PRK10054 228 CISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVIGLVGFIFSG----------- 295 (395)
T ss_pred hHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHHHHHHHHHcc-----------
Confidence 45566543 3456666777777777777667777889999998 999999999988888876665431
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
++.+.+.+...+.++|.+...|...+.+.+..+++ +++++++.. ...++|..+++.+++++
T Consensus 296 -----------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~-------~~~~~~~~~-~~~~~G~~~Gp~~~G~l 356 (395)
T PRK10054 296 -----------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG-------MKASYFSAQ-SLGWLGAAINPLVSGVI 356 (395)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc-------cceehHhHH-HHHHHHHHHHHHHHHHH
Confidence 13445566677899998888888888888876532 245566643 35558999999999999
Q ss_pred ccccC
Q 045901 167 QDNLG 171 (171)
Q Consensus 167 ~~~~g 171 (171)
.|..|
T Consensus 357 ~~~~g 361 (395)
T PRK10054 357 LTTLP 361 (395)
T ss_pred HHHcC
Confidence 88654
No 185
>PRK11043 putative transporter; Provisional
Probab=98.58 E-value=1.9e-06 Score=71.79 Aligned_cols=136 Identities=10% Similarity=0.080 Sum_probs=92.4
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
.....+|.|++ +.|+++.+++...........++.++++++.||+ ||||.+....++..++.+.+......+
T Consensus 221 ~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 292 (401)
T PRK11043 221 AWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLLS------ 292 (401)
T ss_pred HHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 33445667775 5799999999888888888889999999999998 999987777666665554443322110
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
..+.....+...+.+++.+...|.......|..++ .+++..+++......++..++.+.+
T Consensus 293 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~g~~~~~~~~~~~~~~~~~g 352 (401)
T PRK11043 293 ------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ--------ATGKAAALQNTLQLGLCFLASLLVS 352 (401)
T ss_pred ------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc--------cChHHHHHHHHHHHHHHHHHHHHHH
Confidence 01234455566678888888888887766665432 1466777766666666666666666
Q ss_pred hhcc
Q 045901 165 YIQD 168 (171)
Q Consensus 165 ~i~~ 168 (171)
.+.+
T Consensus 353 ~l~~ 356 (401)
T PRK11043 353 ALIS 356 (401)
T ss_pred HccC
Confidence 6544
No 186
>PRK11462 putative transporter; Provisional
Probab=98.58 E-value=1e-06 Score=75.72 Aligned_cols=135 Identities=10% Similarity=0.109 Sum_probs=84.0
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
.|.+..+|. +...+.+...+.+...++.+++++++||+ |||+.+..+..+..+..+++.+. |.
T Consensus 253 y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~---~~------------ 315 (460)
T PRK11462 253 YYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFV---PM------------ 315 (460)
T ss_pred hhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh---ch------------
Confidence 333333443 34445667777888889999999999998 99988776555444433333221 10
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
++...+++..++.+++.+...+...++.+|..+.++-+..+++-+..++.+.+..++|..++..+.+++.+.
T Consensus 316 ------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 316 ------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233444556777777777777888899876543211112224446666678888888888877776543
No 187
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.52 E-value=6.6e-07 Score=78.07 Aligned_cols=130 Identities=16% Similarity=0.199 Sum_probs=104.4
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
+-..+.++++.+..+++++.+.......+..++.+.+.||+ |.|++++.|.++..+|.++..++.
T Consensus 68 ~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~lssF~~-------------- 132 (509)
T KOG2504|consen 68 LFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLSSFAT-------------- 132 (509)
T ss_pred hHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHHHHHh--------------
Confidence 44566678999999999999999999999999999999998 999999999999999999888875
Q ss_pred cCCCCccchhHHHHHHHH-HHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 90 SGCESATASQLMLLYSAF-GLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l-~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
+.+.+++.. ++.|+|.|+...+....+...|+ |||+.+.++-..+.-+|.++=+.+..++.+
T Consensus 133 ---------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~--------kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 133 ---------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE--------KKRALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred ---------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhH--------HHHHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 355555544 57999999999999988888774 346777776556666666665666666655
Q ss_pred ccC
Q 045901 169 NLG 171 (171)
Q Consensus 169 ~~g 171 (171)
++|
T Consensus 196 ~~G 198 (509)
T KOG2504|consen 196 KYG 198 (509)
T ss_pred HhC
Confidence 543
No 188
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.51 E-value=3.5e-07 Score=77.34 Aligned_cols=138 Identities=16% Similarity=0.232 Sum_probs=100.4
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhh----hccCchhH-HHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLAD----SCMGRYPM-IGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laD----r~~Gr~~~-i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
..+++.|+++.+|+++..++.+..+..+...+.-++.|+++| |+ ||||- ++++.++..++.+++.... |...
T Consensus 21 ~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~llf~~~--p~~~ 97 (428)
T PF13347_consen 21 SSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLLFSPP--PAGL 97 (428)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHhhccc--cchh
Confidence 347789999999999999999999999999999999999999 77 76555 5578888888877664331 2000
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
+...+...+.+..++..++......+..+++.|..++++ | |.+...+-....++|.++...
T Consensus 98 -------------~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~--~----R~~l~~~~~~~~~~g~~l~~~ 158 (428)
T PF13347_consen 98 -------------SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD--E----RTRLSSWRMIFSMIGSLLASF 158 (428)
T ss_pred -------------hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh--h----hhhHHHHHHHHHHHHHHHHHH
Confidence 001123334666677899999999999999999876533 2 567777766677777765554
Q ss_pred HHHhh
Q 045901 162 FIVYI 166 (171)
Q Consensus 162 ~~~~i 166 (171)
+.+.+
T Consensus 159 ~~~~l 163 (428)
T PF13347_consen 159 LAPIL 163 (428)
T ss_pred Hhhhh
Confidence 44443
No 189
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.50 E-value=2.8e-06 Score=72.41 Aligned_cols=137 Identities=12% Similarity=-0.027 Sum_probs=85.0
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHH--------HHHHHHHHHHHHHHHHh
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMI--------GFGCIISLLGMVLLWFT 74 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i--------~~~~~l~~lg~~ll~~~ 74 (171)
++....++|.|+++.+|++..+++.......+...++.+++|+++||+ ++||.. ..+......+..++...
T Consensus 277 ~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (465)
T TIGR00894 277 YTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIFNGIGGLGPGIFAYALP 355 (465)
T ss_pred HHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667889999999999999999999999999999999999999997 544321 11111111111111111
Q ss_pred hhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHH
Q 045901 75 AIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAA 154 (171)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~ni 154 (171)
. .. .+.....+.+.+.+.+.++..+.......|.. | +.++...++.....++
T Consensus 356 ~-~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~----~~~g~~~g~~~~~~~l 407 (465)
T TIGR00894 356 Y-LS-------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLA----P----RFLGFIKGITGLPGFI 407 (465)
T ss_pred H-cC-------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcC----h----hHHHHHHHHHHHHHHH
Confidence 1 00 01222333334444444444443333333322 2 2478888888889999
Q ss_pred HHHHHhHHHHhhcc
Q 045901 155 GSMLSATFIVYIQD 168 (171)
Q Consensus 155 G~~i~~~~~~~i~~ 168 (171)
|.++++.+.+++.+
T Consensus 408 ~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 408 GGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHhhheeeC
Confidence 99999999988765
No 190
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.49 E-value=1.3e-06 Score=73.88 Aligned_cols=131 Identities=14% Similarity=0.013 Sum_probs=94.3
Q ss_pred ccHHHHHHHhhHh-hCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 5 GLMPNMILYLCRE-YNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 5 gv~~~l~~yl~~~-lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
++..+++.|+++. .+.+...++.....+.....++.+++|++.||. ++||.+.++.++..+..++.....
T Consensus 250 ~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll~~~~~-------- 320 (410)
T TIGR00885 250 MCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLGSIFAG-------- 320 (410)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 4567788888653 255666667677777788899999999999997 999999888888887766665432
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+. .....+.+.++..+.+.|...+...+.++++.. .... ..-++. +|..+.|.+.
T Consensus 321 ---------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~------~~s~--~l~~~~-~Gga~~p~l~ 375 (410)
T TIGR00885 321 ---------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTK------YGAA--GLVMAI-IGGGIVPPLQ 375 (410)
T ss_pred ---------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh------hhHH--HHHHHH-hccchHHHHH
Confidence 11 124556677788888889999999998864321 1111 222233 8888889999
Q ss_pred Hhhccc
Q 045901 164 VYIQDN 169 (171)
Q Consensus 164 ~~i~~~ 169 (171)
+++.|.
T Consensus 376 G~~~d~ 381 (410)
T TIGR00885 376 GFIIDM 381 (410)
T ss_pred HHHHHH
Confidence 999884
No 191
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.48 E-value=1.2e-06 Score=75.34 Aligned_cols=140 Identities=21% Similarity=0.221 Sum_probs=109.6
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
++.|.+.-+|.++..+............++.++...+.+|+ ||||+..++.++..++.+++.+..
T Consensus 259 ~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~~~~~f~~-------------- 323 (467)
T COG2211 259 MVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGYLLLYFTP-------------- 323 (467)
T ss_pred hheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHHHHHHhhc--------------
Confidence 34455556788888888888888888888899999999997 999999999999999999887764
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
.++.++.++..++.++|.+...+...++++|..+-++-+..+++-+-.++..-+..=+|..++..+.+++-..
T Consensus 324 -------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 324 -------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred -------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1256777888899999999999999999999876544322223345666666666778888888777777654
Q ss_pred cC
Q 045901 170 LG 171 (171)
Q Consensus 170 ~g 171 (171)
.|
T Consensus 397 ~G 398 (467)
T COG2211 397 IG 398 (467)
T ss_pred cC
Confidence 43
No 192
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.47 E-value=6.8e-07 Score=58.70 Aligned_cols=57 Identities=26% Similarity=0.364 Sum_probs=50.1
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHH
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIIS 64 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~ 64 (171)
+.++++.|++ +.|+++.+.+.+..+......+++++.|+++||+ +|+|.++....+.
T Consensus 19 ~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 19 LYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 5567788887 5899999999999999999999999999999998 8888887766543
No 193
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.45 E-value=1.9e-06 Score=76.38 Aligned_cols=97 Identities=13% Similarity=0.192 Sum_probs=79.2
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQM 88 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~ 88 (171)
....+...++|-+ ....++...+.+.+.+..++.|.|+|.+ |||..++++.++..+|.++++.++
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------- 129 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------- 129 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC-------------
Confidence 3446777788876 5566788889999999999999999998 999999999999999999887654
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCC
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDK 131 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~ 131 (171)
+...+++|..+.|+|.|... .....++|..+.
T Consensus 130 ----------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~ 161 (599)
T PF06609_consen 130 ----------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPN 161 (599)
T ss_pred ----------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhccc
Confidence 45568899999999977765 445568898864
No 194
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.41 E-value=2.9e-06 Score=70.89 Aligned_cols=130 Identities=15% Similarity=-0.007 Sum_probs=80.2
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCch---hHHH-HHHHHHHHHHHHHHHhhhc
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRY---PMIG-FGCIISLLGMVLLWFTAIF 77 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~---~~i~-~~~~l~~lg~~ll~~~~~~ 77 (171)
.+|++..++|.|++ +.|++.. ++........... +..++++||. .|| +... ...++..+....+....
T Consensus 207 ~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~~~~a~~~~~~~~~~-- 278 (368)
T TIGR00903 207 LFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAALLIAAFFLALAFEL-- 278 (368)
T ss_pred HHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHHHHHHHHHHHHHHcc--
Confidence 46778889999996 4688865 4544444444333 4468899986 554 3322 23333333322222111
Q ss_pred CCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 045901 78 PQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSM 157 (171)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~ 157 (171)
+.....+...+.++......+...++.+|.++++ .|++..++.+...++|+.
T Consensus 279 ---------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~-------~rgt~~G~~~~~g~~~~~ 330 (368)
T TIGR00903 279 ---------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKE-------LHGKAAGAIGFTSRAISV 330 (368)
T ss_pred ---------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchh-------hcCcccchhhHHHHHHHH
Confidence 1122233344555666666677778889998653 378999999999999998
Q ss_pred HHhHHHHhhc
Q 045901 158 LSATFIVYIQ 167 (171)
Q Consensus 158 i~~~~~~~i~ 167 (171)
+++.+.+.+.
T Consensus 331 ~~~~~~~~~~ 340 (368)
T TIGR00903 331 ALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHh
Confidence 8888777654
No 195
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.35 E-value=2.4e-06 Score=74.56 Aligned_cols=131 Identities=17% Similarity=0.143 Sum_probs=100.2
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHH--HHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIG--FGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~--~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
..++.|.. ..++++.+++.++++..+...++.++.|+++|+. ..++..+ ++.++..++...+.+..
T Consensus 319 ~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~gl~~~~~p~~~---------- 386 (509)
T KOG2504|consen 319 VYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIAGLARLFLPFAT---------- 386 (509)
T ss_pred HHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 34556665 7899999999999999999999999999999997 6444444 44444444443333322
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
+++.+..--+++|+..|.+....+..+.|..+.+ +...++++......++.++++-+.++
T Consensus 387 -------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~-------~l~~a~Gl~l~~~gi~~l~gpPiag~ 446 (509)
T KOG2504|consen 387 -------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE-------KLSNAYGLLLLFQGIGALVGPPIAGL 446 (509)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh-------hcchHHHHHHHHhHHHHHcCccccee
Confidence 3555666667888888888888888888988653 37889999999999999999999998
Q ss_pred hcccc
Q 045901 166 IQDNL 170 (171)
Q Consensus 166 i~~~~ 170 (171)
+.|..
T Consensus 447 ~~d~t 451 (509)
T KOG2504|consen 447 LYDIT 451 (509)
T ss_pred eeecc
Confidence 88754
No 196
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.35 E-value=5.8e-06 Score=71.97 Aligned_cols=122 Identities=10% Similarity=-0.016 Sum_probs=99.4
Q ss_pred HhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCc
Q 045901 16 REYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESA 95 (171)
Q Consensus 16 ~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 95 (171)
+++++...+-+.+.++|.++..++.+++|+|.||+ .-.+.+....++..+-.++....
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~--------------------- 131 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV--------------------- 131 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 46788888999999999999999999999999998 86666666666555443333222
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 96 TASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 96 ~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
++.+.+++-+++.|+-++...|+...+++..|++++ |+.-+++++....+|.++|..+...+++
T Consensus 132 --~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e-------~g~r~~~~~a~~~~g~i~ggliA~g~~~ 195 (495)
T KOG2533|consen 132 --HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE-------RGLRMGIWYASASLGNIFGGLIAYGVFK 195 (495)
T ss_pred --hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh-------hhhhHHHHHHhcchhhHHHHHHHHHhhh
Confidence 267889999999999999999999999999997543 6788889998999999888887777543
No 197
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.34 E-value=1.8e-05 Score=60.80 Aligned_cols=124 Identities=19% Similarity=0.179 Sum_probs=91.6
Q ss_pred HhhCCCh--HHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCC
Q 045901 16 REYNMET--TAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCE 93 (171)
Q Consensus 16 ~~lg~s~--~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~ 93 (171)
.+++.+. ...+.....+.....+..++.|+++||+ |||+.+..+.....++.+++.+...
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~----------------- 91 (338)
T COG0477 30 STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN----------------- 91 (338)
T ss_pred HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc-----------------
Confidence 3455555 5788899999999999999999999998 9999999888876666454544321
Q ss_pred CccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHH-HHHHHHHHHhHHHHhhc
Q 045901 94 SATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYV-SIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 94 ~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~-~~niG~~i~~~~~~~i~ 167 (171)
.....+.+.+...+++.|...+...+++.|.+++ . +++....++... ...+|.++++.+.+++.
T Consensus 92 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 92 ----VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A-----TERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred ----chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1356677777789999999999999999999865 1 125666666666 46677777776555543
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=98.33 E-value=5e-06 Score=71.44 Aligned_cols=104 Identities=14% Similarity=0.093 Sum_probs=75.9
Q ss_pred HHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHH
Q 045901 32 WTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMS 111 (171)
Q Consensus 32 ~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g 111 (171)
..+...++.++.+++.||+ |||+.+.++.++..++.+++.+.. . . ..+...+..++.+
T Consensus 364 ~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~---~-----------------~-~~~~~~~~~~~~~ 421 (505)
T TIGR00898 364 SGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP---V-----------------D-LYFLRTALAVLGK 421 (505)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC---C-----------------C-chHHHHHHHHHHH
Confidence 3456677888999999997 999999999998888877665432 1 0 1122333344555
Q ss_pred HhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 112 LGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 112 ~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
.+.+...+....+.+|.++++ .|++..++......+|.++++.+.+
T Consensus 422 ~~~~~~~~~~~~~~~e~~p~~-------~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 422 FGITSAFQMVYLYTAELYPTV-------VRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHhcccccHH-------HHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 666666677788888988542 3788889988889999999998776
No 199
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.31 E-value=2.4e-05 Score=65.06 Aligned_cols=131 Identities=12% Similarity=0.082 Sum_probs=89.8
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
.+.|+++.+|+++.+.+.+......+..++.++.+++.||+ +|+. ..+.....++.+.+.......
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~----------- 295 (394)
T PRK11652 230 SGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLM--WQSVICCLLAGLLMWIPGWFG----------- 295 (394)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHHhc-----------
Confidence 45677777999999999988888888888888899999997 6333 333333333333222211000
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
..+.+.+..+..+.++|.|...|.......|..++ .++.....+....++|..+++.+.+++.++
T Consensus 296 -------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 296 -------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY--------LAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred -------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--------cchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 01234566667788899998889999888776642 146667777778899999999888877654
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.30 E-value=1.4e-05 Score=66.66 Aligned_cols=128 Identities=16% Similarity=0.128 Sum_probs=108.6
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
+..-.++++|+|.+.++.+.+.=.....+..+++.+++.|+ |..+.+..++++..+|..+=...
T Consensus 34 LL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~--------------- 97 (395)
T COG2807 34 LLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG--------------- 97 (395)
T ss_pred hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc---------------
Confidence 44556789999999999999999999999999999999997 99999999999999997643221
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
+...++.+-.+.|.|.+..+...|..+.+-|++ +.+...+.|..+.++|+.++..+...+.++
T Consensus 98 ---------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk--------~~~~mtglYs~sl~~~aaLaa~lavpla~~ 160 (395)
T COG2807 98 ---------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK--------RVGLMTGLYSTSLGAGAALAAALAVPLAQH 160 (395)
T ss_pred ---------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc--------chhhHHhHHHHHHHHHHHHHhhhhhHHHHh
Confidence 345688888999999999999999999998863 357788899999999999999888877764
Q ss_pred c
Q 045901 170 L 170 (171)
Q Consensus 170 ~ 170 (171)
.
T Consensus 161 ~ 161 (395)
T COG2807 161 S 161 (395)
T ss_pred h
Confidence 3
No 201
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.27 E-value=1.1e-05 Score=68.43 Aligned_cols=101 Identities=20% Similarity=0.192 Sum_probs=74.2
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+++++|++ +.|+|..|.|.+.+.......+++++.|+++||+..+||.+.+..++..+...+....+
T Consensus 22 ~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~----------- 89 (400)
T PF03825_consen 22 LPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS----------- 89 (400)
T ss_pred HHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 457788887 56899999999999999999999999999999985678888777776665544333321
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCC
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDK 131 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~ 131 (171)
+.+.+++...+..+...-..|...+..-+..++
T Consensus 90 ------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~ 122 (400)
T PF03825_consen 90 ------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD 122 (400)
T ss_pred ------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc
Confidence 344455556667777666667777766666553
No 202
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.25 E-value=1.6e-05 Score=66.10 Aligned_cols=139 Identities=11% Similarity=-0.012 Sum_probs=78.7
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHH--HHHHHHHhhhhh-hhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 045901 6 LMPNMILYLCREYNMETTAATNVL--FIWTAATNFVPI-LGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKP 82 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~--~~~~~~~~i~~~-~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~ 82 (171)
+.+.+|.|++ +.|.|+.+.+.+. ........+.++ +.++.+||+ ||||..++...+..... +..++...+.
T Consensus 20 ~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~~~~-~~~~~~~~~~--- 93 (390)
T TIGR02718 20 AMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLVSAC-LASLALVGPD--- 93 (390)
T ss_pred HHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHHHHH-HHHHHcCCcc---
Confidence 3466777886 5699999999973 444555545554 458889997 99999766654322211 1222210110
Q ss_pred CcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 045901 83 PVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATF 162 (171)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~ 162 (171)
......+.....+.++......+....+..|..++ ++++.+..+..++..+|.+++..+
T Consensus 94 --------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~-------~~~~~~~~~~~~g~~lG~~~g~~~ 152 (390)
T TIGR02718 94 --------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNG-------RTLAKGNAVQIAGVMIGFFGGGAG 152 (390)
T ss_pred --------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 01122233333344455555555555444443321 234556666677778899998887
Q ss_pred HHhhccccC
Q 045901 163 IVYIQDNLG 171 (171)
Q Consensus 163 ~~~i~~~~g 171 (171)
.+++.++.|
T Consensus 153 ~~~l~~~~g 161 (390)
T TIGR02718 153 TLVLFGKFG 161 (390)
T ss_pred HHHHHHHhC
Confidence 777766543
No 203
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.25 E-value=4.6e-05 Score=66.11 Aligned_cols=103 Identities=13% Similarity=0.141 Sum_probs=73.8
Q ss_pred HhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCc
Q 045901 16 REYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESA 95 (171)
Q Consensus 16 ~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 95 (171)
.+-|++..++...+......+.++.+++.++-||+ |||++++++..++.+..+++.....+....
T Consensus 298 ~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~~~~~~~~~~~l~~~~-------------- 362 (485)
T KOG0569|consen 298 KTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAVALLLMSIALFLSNSF-------------- 362 (485)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------
Confidence 36799999999999999999999999999999998 999999999999999998887765321100
Q ss_pred cchhHHHHHHHHHHHHHhccc-cccchhhhhhhcCCCCC
Q 045901 96 TASQLMLLYSAFGLMSLGGGS-IRASSLVFGADQLDKGN 133 (171)
Q Consensus 96 ~~~~~~~~~~~l~l~g~g~G~-~~~~~~~~~ad~~~~~~ 133 (171)
+++.....++++++..+..+. ..|...=+.+|.++...
T Consensus 363 ~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~ 401 (485)
T KOG0569|consen 363 GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA 401 (485)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc
Confidence 011112233444444444443 24555566789997643
No 204
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.23 E-value=2.4e-05 Score=66.93 Aligned_cols=137 Identities=13% Similarity=0.155 Sum_probs=103.2
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhcc----CchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCM----GRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~----Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
....|+++++|+++.+.............+=+ +.|.++|.+- -||+-++++.++..++.+.+...+ ..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp-~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~---~~---- 82 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKP-LYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP---AS---- 82 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhh-hHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc---cc----
Confidence 45578999999999999998888877777755 8999999961 366667778887766665554432 11
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
..+.....+.+++..+|.........++..|..+.++. .++....+.+....+|.+++..+.+
T Consensus 83 ------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~-----~~g~lqS~~~~~~~~G~lv~~~l~G 145 (433)
T PF03092_consen 83 ------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE-----SRGDLQSFVWGVRSVGSLVGSLLSG 145 (433)
T ss_pred ------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc-----hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11233445566788999999999999999998865432 2677788888999999999998888
Q ss_pred hhcccc
Q 045901 165 YIQDNL 170 (171)
Q Consensus 165 ~i~~~~ 170 (171)
++.++.
T Consensus 146 ~l~~~~ 151 (433)
T PF03092_consen 146 PLLDSF 151 (433)
T ss_pred hhhhcC
Confidence 887654
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.20 E-value=2.6e-06 Score=72.37 Aligned_cols=54 Identities=11% Similarity=0.096 Sum_probs=44.6
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHH
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGC 61 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~ 61 (171)
.++++++|+++.|+|.++.|.+.++......+..++.|.++||. |.||-++...
T Consensus 27 ~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i 80 (412)
T PF01306_consen 27 LPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFI 80 (412)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHH
T ss_pred HHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHH
Confidence 56888999999999999999999999999999999999999997 8666655443
No 206
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.10 E-value=8.6e-05 Score=59.26 Aligned_cols=104 Identities=16% Similarity=0.193 Sum_probs=80.0
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
....+++++|+|.+|.+.+-..-.++..++ ++.|.+.|++ |++.++.+|.+...+|+.++..+-.-.
T Consensus 24 yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~----------- 90 (250)
T PF06813_consen 24 YSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGR----------- 90 (250)
T ss_pred hhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCc-----------
Confidence 345678899999999999999999999874 7999999998 999999999999999999887754110
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCC
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDK 131 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~ 131 (171)
..+.+.+.+++-..+.+.|...+.+.....-.+.||+
T Consensus 91 -----i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 91 -----IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred -----cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 0012456666666677777766766665555677864
No 207
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.09 E-value=1.8e-07 Score=76.13 Aligned_cols=135 Identities=17% Similarity=0.249 Sum_probs=109.9
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
+.++.+.+.+.+.++..++.+++.--+.+.+.++||+-||.+|-|..-++-++...+|-++.+....
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi------------- 132 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI------------- 132 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-------------
Confidence 4566666788888888999999999999999999999999999988877777888888877765432
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
.+..|....||+++|+|.-....+-+.+....|+.+ ..+..++++.-...+|+.+...+.+++++.
T Consensus 133 -------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGK-------ELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 133 -------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGK-------ELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred -------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCc-------cccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 347899999999999998777777777776666543 378889998888889999999999999886
Q ss_pred cC
Q 045901 170 LG 171 (171)
Q Consensus 170 ~g 171 (171)
+|
T Consensus 199 ~~ 200 (459)
T KOG4686|consen 199 MG 200 (459)
T ss_pred HH
Confidence 53
No 208
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.03 E-value=1.6e-05 Score=68.59 Aligned_cols=136 Identities=10% Similarity=-0.067 Sum_probs=102.7
Q ss_pred hHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCC
Q 045901 15 CREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCES 94 (171)
Q Consensus 15 ~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
++.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++..++.+........+.... ..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~----------gi 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAF----------GI 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccccc----------CC
Confidence 357899999999999999999999999999999997 9999999999999988765432110010000 00
Q ss_pred ccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Q 045901 95 ATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNLG 171 (171)
Q Consensus 95 ~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~g 171 (171)
+ ..+.......+.+++.|....+...++.+..+++. .++.++++....|+|..++..+++++.++.|
T Consensus 349 ~---~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~-------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 349 S---DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC-------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred C---CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc-------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0 11223344467788888888888999999876543 4889999999999999999999999988765
No 209
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.98 E-value=0.0001 Score=63.62 Aligned_cols=140 Identities=16% Similarity=0.290 Sum_probs=104.8
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc---cCchhH-HHHHHHHHHHHHHHHHHhhhcCCCC
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC---MGRYPM-IGFGCIISLLGMVLLWFTAIFPQEK 81 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~-i~~~~~l~~lg~~ll~~~~~~~~~~ 81 (171)
+...+..|.|+..|+++..+|.+..+--+.-++.-++.|++.||. +||||- ++.+.+-..+...++..+. ...
T Consensus 31 ~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p---~~~ 107 (467)
T COG2211 31 VVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP---DFS 107 (467)
T ss_pred HHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC---Ccc
Confidence 455788999999999999999999999999999999999999963 266554 5566677777666554432 110
Q ss_pred CCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 82 PPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
...+..-.++...+.+++.-..+.+-.++.++..++ |+| |.+..+|-.+..++|.++...
T Consensus 108 --------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d--~~E----R~~l~s~R~~~~~~g~~l~~~ 167 (467)
T COG2211 108 --------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD--PQE----RASLTSWRMVFASLGGLLVAV 167 (467)
T ss_pred --------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC--HHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 012344445666789999999999999999998764 443 788999998999999777766
Q ss_pred HHHhhcc
Q 045901 162 FIVYIQD 168 (171)
Q Consensus 162 ~~~~i~~ 168 (171)
+.+.+..
T Consensus 168 ~~~plv~ 174 (467)
T COG2211 168 LFPPLVK 174 (467)
T ss_pred HHHHHHH
Confidence 5555443
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.95 E-value=0.00024 Score=60.12 Aligned_cols=101 Identities=21% Similarity=0.375 Sum_probs=87.0
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
+|=-+.+|++..+...++..+..+..++-.+.|++..|..++|++..+++.+..++..++.++...
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~-------------- 298 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL-------------- 298 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 333456899999999999999999999999999999977799999999999999999988887631
Q ss_pred CCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCC
Q 045901 92 CESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKG 132 (171)
Q Consensus 92 ~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~ 132 (171)
.+.+.+..+.+++|+|.|.+.......+.|.-.++
T Consensus 299 ------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~ 333 (403)
T PF03209_consen 299 ------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG 333 (403)
T ss_pred ------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc
Confidence 14577889999999999999999999999987543
No 211
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.90 E-value=0.00036 Score=59.26 Aligned_cols=139 Identities=12% Similarity=0.013 Sum_probs=101.9
Q ss_pred HHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 7 MPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
..+...|+++.-|.+....+.+.+.-.+.=.+.-.+.+++-.|+ |.|+++.++.+...+=..+.+.... |
T Consensus 227 ~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~a~~~~-~-------- 296 (400)
T PF03825_consen 227 YTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLYAYFSD-P-------- 296 (400)
T ss_pred HHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhcC-C--------
Confidence 34667888754448888888777766677777778899999998 9999999999998887776665420 0
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHHHHhHHHHh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIA-AGSMLSATFIVY 165 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~n-iG~~i~~~~~~~ 165 (171)
..........+-.+-|+..|.+.+....++.+..|++ .|.+..+++....+ +|..+|..++|+
T Consensus 297 ---------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~-------~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 297 ---------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE-------LRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred ---------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc-------chHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 0001122233345689999999999999998887643 25777777766544 899999999999
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.|++|
T Consensus 361 l~~~~g 366 (400)
T PF03825_consen 361 LYDAFG 366 (400)
T ss_pred HHHHhc
Confidence 999765
No 212
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.88 E-value=0.0002 Score=62.24 Aligned_cols=139 Identities=12% Similarity=0.129 Sum_probs=91.4
Q ss_pred cHHHHHHHhhHhhCCChH----HHHHHHHHHHHHHhhhhhhhHHHhhhccCchhH-------HHHHHHHHHHHHHHHHHh
Q 045901 6 LMPNMILYLCREYNMETT----AATNVLFIWTAATNFVPILGAFLADSCMGRYPM-------IGFGCIISLLGMVLLWFT 74 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~----~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~-------i~~~~~l~~lg~~ll~~~ 74 (171)
....++.|.++..+.+.. ..+.+.+...+...+..++.|++.||+ +||+. +.+|.++..++.+.++..
T Consensus 288 ~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~ 366 (489)
T PRK10207 288 MPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLGFLTAAAA 366 (489)
T ss_pred cccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 335566777643322110 123333334445656677788999998 98874 888989888887655432
Q ss_pred hh-cCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHH
Q 045901 75 AI-FPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIA 153 (171)
Q Consensus 75 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~n 153 (171)
.. ....+ . ..+.+.+....++.++|.++..|....++.+..|+ +.++.+.+.++...+
T Consensus 367 ~~~~~~~~-------------~-~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~-------~~~g~~~g~~~l~~~ 425 (489)
T PRK10207 367 GMWFADAQ-------------G-LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQ-------HLMGFILGMWFLTQA 425 (489)
T ss_pred HHhhcCCC-------------C-ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChH-------HHHHHHHHHHHHHHH
Confidence 21 11000 0 11345566778899999999999999988887643 236888889999999
Q ss_pred HHHHHHhHHHHhh
Q 045901 154 AGSMLSATFIVYI 166 (171)
Q Consensus 154 iG~~i~~~~~~~i 166 (171)
+|..++..+..+.
T Consensus 426 ig~~lg~~l~~~~ 438 (489)
T PRK10207 426 AAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHh
Confidence 9999988777554
No 213
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.85 E-value=0.00045 Score=58.35 Aligned_cols=102 Identities=16% Similarity=0.054 Sum_probs=68.0
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
+....+|.|+++.+|+++.+.+...........++..+.+.+.+|. .++|.+.....+..+|..++.......
T Consensus 236 ~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig~~l~~~~~~~~------ 308 (413)
T PRK15403 236 SWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVGLALLIVGNLLW------ 308 (413)
T ss_pred HHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHHHHHHHHHHHc------
Confidence 3344568899988999999999988877778888777777665554 455555555555556655554432100
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhh
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFG 125 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ 125 (171)
++.++..+++.++.++|.+...|+.....
T Consensus 309 ------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~a 337 (413)
T PRK15403 309 ------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFT 337 (413)
T ss_pred ------------cccHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 01233456778888999999888888533
No 214
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.82 E-value=0.0004 Score=58.82 Aligned_cols=141 Identities=18% Similarity=0.141 Sum_probs=98.7
Q ss_pred hhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccC------chhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 14 LCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMG------RYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 14 l~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~G------r~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
+..|++.+..-.+.++..-...+.. .+..|+.||++ + |-+-+..|.++...|..+..++...-...
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~-R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~------ 77 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPL-RVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAES------ 77 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHH-HHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccc------
Confidence 4468999999999888877777664 77999999998 6 44556788888888877776654211100
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
.... +.+..........+..+.|+|.+...++..++.+|..+++ +|.+...+.|...-+|.+++.++.+.+-
T Consensus 78 ~~~~-~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~-------~R~~~v~ivw~Mli~G~iv~ai~~g~lL 149 (403)
T PF03209_consen 78 GQQS-SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEE-------RRPRVVAIVWVMLIVGIIVSAIVFGRLL 149 (403)
T ss_pred cccc-ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHh-------hhhhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0000 1111112223344556789999999999999999987643 3788888888888899999998888776
Q ss_pred ccc
Q 045901 168 DNL 170 (171)
Q Consensus 168 ~~~ 170 (171)
+.+
T Consensus 150 ~~~ 152 (403)
T PF03209_consen 150 DPF 152 (403)
T ss_pred ccc
Confidence 643
No 215
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.75 E-value=2.6e-05 Score=65.92 Aligned_cols=139 Identities=14% Similarity=0.042 Sum_probs=102.5
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccC--chhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMG--RYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~G--r~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
+.++++..+++..+..+.+.......+...++..+.|.++||+ + |+.....++++..+......++
T Consensus 291 Ptlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP~~----------- 358 (464)
T KOG3764|consen 291 PTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIPFA----------- 358 (464)
T ss_pred cccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhHhh-----------
Confidence 4566777788886666888888888899999999999999998 8 6655555655544332222222
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
+++..+.+-.+..+++.+...+...|......+..+.++- +..++.+.++-.+..+|..+||++++.
T Consensus 359 ------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~-~vYGsVyaIad~a~sla~a~GP~~gg~ 425 (464)
T KOG3764|consen 359 ------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGF-NVYGSVYAIADAAFSLAYAIGPTFGGS 425 (464)
T ss_pred ------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhcccc-ceeeeHHHHHHHHHHHhhhccccccch
Confidence 1445566666778888888888888888888776543211 136788889999999999999999999
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.+++|
T Consensus 426 iv~~iG 431 (464)
T KOG3764|consen 426 LVEAIG 431 (464)
T ss_pred heeehh
Confidence 988775
No 216
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00034 Score=59.19 Aligned_cols=132 Identities=14% Similarity=0.156 Sum_probs=98.7
Q ss_pred cHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcc
Q 045901 6 LMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVC 85 (171)
Q Consensus 6 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~ 85 (171)
+.++++.|+.+..|++..+++..++.+..+.+++..++-++-.|+ -..|.+.+..++..+-.+...+.+
T Consensus 255 ~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~~---------- 323 (422)
T COG0738 255 IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALIG---------- 323 (422)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 567899999988999999999999999999999999999999997 888888877766554443333332
Q ss_pred cccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 86 DQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
+ ..-..++.++|+-.+.+.|.+.+...+.+++++. .++..- ...-+|..+-|.+.++
T Consensus 324 -------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts------~~s~~l---~maivGGAiiP~l~G~ 380 (422)
T COG0738 324 -------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS------VGSGLL---VMAIVGGAIIPPLQGV 380 (422)
T ss_pred -------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc------ccceee---eeheecchHHHHHHHH
Confidence 2 2234556789999999999999999999984332 232221 1223566666888888
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
+.|..|
T Consensus 381 i~d~~g 386 (422)
T COG0738 381 IADMFG 386 (422)
T ss_pred HHHhhh
Confidence 888654
No 217
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.62 E-value=8.8e-06 Score=71.55 Aligned_cols=155 Identities=14% Similarity=0.257 Sum_probs=2.7
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCC---
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEK--- 81 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~--- 81 (171)
|.......-++++++++.+++|.+.+.+.++..+..++..+.++|. .|-|-+-+|.++..+|.+++++-+.+....
T Consensus 20 g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 20 GYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 3334444566778999999999999999999999999999999997 999999999999999999988755311100
Q ss_pred ------------CCcc--------cccccCC-C--Cccc-hhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcch
Q 045901 82 ------------PPVC--------DQMRSGC-E--SATA-SQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKN 137 (171)
Q Consensus 82 ------------~~~~--------~~~~~~~-~--~~~~-~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~ 137 (171)
.+-| .+..+.| + .... .-...+++|-++.|+|..-..+...+++=|-.+++
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~----- 173 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK----- 173 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc-----
Confidence 0012 0000011 1 1111 12356778888899988888888887776654432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 138 AGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 138 ~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
+...+.++++....+|.++|+++++...
T Consensus 174 --~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 174 --NSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ------------------------------
T ss_pred --cCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 3577888999999999999998887654
No 218
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.60 E-value=0.00031 Score=59.33 Aligned_cols=98 Identities=13% Similarity=0.051 Sum_probs=76.8
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
-+-+....|.+..++.++......+..+++...|.++|++ ||||...+..+...+.-++-..+ |
T Consensus 101 ~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s---p------------ 164 (528)
T KOG0253|consen 101 LPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS---P------------ 164 (528)
T ss_pred HHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC---C------------
Confidence 3445557899999999999999999999999999999998 99999888777666443322221 1
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCC
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGN 133 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~ 133 (171)
++..+++-+.+.++|.|+ .|...+.-.|..+..+
T Consensus 165 --------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~ 198 (528)
T KOG0253|consen 165 --------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH 198 (528)
T ss_pred --------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC
Confidence 455677778899999999 8888888888776543
No 219
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.58 E-value=0.0013 Score=56.84 Aligned_cols=140 Identities=9% Similarity=0.060 Sum_probs=90.5
Q ss_pred HHHHHHHhhHhhCCChHH----HHHHHHHHHHHHhhhhhh----hHHHhhhccCchhHH--HHHHHHHHHHHHHHHHhhh
Q 045901 7 MPNMILYLCREYNMETTA----ATNVLFIWTAATNFVPIL----GAFLADSCMGRYPMI--GFGCIISLLGMVLLWFTAI 76 (171)
Q Consensus 7 ~~~l~~yl~~~lg~s~~~----a~~~~~~~~~~~~i~~~~----~G~laDr~~Gr~~~i--~~~~~l~~lg~~ll~~~~~ 76 (171)
.+.+++|..+..+.+... .+.+.+...+...+..++ ..++.||..+++... .+|.++..++.+.+.+...
T Consensus 292 ~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~ 371 (475)
T TIGR00924 292 PTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIW 371 (475)
T ss_pred hhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344566666554443211 344444444444444443 335566522344444 7899999999887765431
Q ss_pred cCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 045901 77 FPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGS 156 (171)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~ 156 (171)
... + ..+.+.+.+....++.++|.....|...+++++..|+ +.|+++++.++....+|.
T Consensus 372 ~~~--~------------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~-------~~~g~~~g~~~l~~~~g~ 430 (475)
T TIGR00924 372 FAD--A------------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ-------RLMGQMLGMWFLAQAMGS 430 (475)
T ss_pred hcC--C------------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHH
Confidence 110 0 0123567788899999999999999999999997643 247999999999999999
Q ss_pred HHHhHHHHhhc
Q 045901 157 MLSATFIVYIQ 167 (171)
Q Consensus 157 ~i~~~~~~~i~ 167 (171)
.++..+.....
T Consensus 431 ~l~~~~~~~~~ 441 (475)
T TIGR00924 431 LLGGYLATFGA 441 (475)
T ss_pred HHHHHHHHHHh
Confidence 98877766543
No 220
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.58 E-value=0.00067 Score=58.90 Aligned_cols=127 Identities=17% Similarity=0.145 Sum_probs=92.1
Q ss_pred HHHhhH-hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCc-hhHHHHHHHHHHHHHHHH-HHhhhcCCCCCCcccc
Q 045901 11 ILYLCR-EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGR-YPMIGFGCIISLLGMVLL-WFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 11 ~~yl~~-~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr-~~~i~~~~~l~~lg~~ll-~~~~~~~~~~~~~~~~ 87 (171)
-+|+++ +.+-+++--|++++....+..++.+..|+.+.|. ++ ||-++.|.++..+|.++= ++.. .|.
T Consensus 58 wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~s~ii~~~g~llY~~l~~-~~~-------- 127 (488)
T KOG2325|consen 58 WPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIVSFLIAIIGNLLYLALAY-VPN-------- 127 (488)
T ss_pred chhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHHHHHHHHHHHHHHHHHHh-ccc--------
Confidence 356653 4788888999999999999999999999999997 75 788888999999999876 4433 221
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
. ..+.++++|++.|+|.|. .+..-.+++|-...++ |.+++.....+.-+|..+||++...
T Consensus 128 ---------~-~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d-------R~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 128 ---------G-VKYLMLVARILTGVGVGN-FAVLRAYIADASTVED-------RPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred ---------c-hHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc-------hHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 1 467889999999999654 4666777777544322 4666665545555666666654433
No 221
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.57 E-value=0.00043 Score=59.94 Aligned_cols=104 Identities=18% Similarity=0.141 Sum_probs=76.5
Q ss_pred HHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHH
Q 045901 33 TAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSL 112 (171)
Q Consensus 33 ~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~ 112 (171)
.....+..++-|.++||| |||..+...+....+..+.+.+.. ++.+. +.-..-
T Consensus 72 ~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~~------------------------~~~~~--~~~l~g 124 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQG------------------------YWFFL--LLGLSG 124 (463)
T ss_pred HHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHHH------------------------HHHhh--hccccc
Confidence 467888899999999998 999999999999988887665542 23222 223334
Q ss_pred hccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 113 GGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 113 g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
+.+.......++++|...++ .|.+.+++.+-.+-.+..+++.+++++.+..
T Consensus 125 ~~~~~~s~~~a~vadis~~~-------~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~ 175 (463)
T KOG2816|consen 125 GFSAIFSVGFAYVADISSEE-------ERSSSIGLLSGTFGAGLVIGPALGGYLVKFL 175 (463)
T ss_pred chhhhhhhhhhheeeccchh-------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 44556677777888876542 3788888888888888888888888876643
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.55 E-value=0.0014 Score=57.00 Aligned_cols=114 Identities=12% Similarity=0.130 Sum_probs=80.0
Q ss_pred HHHHHHHHhhhhhhh----HHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHH
Q 045901 29 LFIWTAATNFVPILG----AFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLY 104 (171)
Q Consensus 29 ~~~~~~~~~i~~~~~----G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (171)
.+...+...+..++. +++.||. ++.+.+.++.++..++++++......+.. ++ ..+.+.+.
T Consensus 322 ~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~l~f~~l~~~~~~~~~-----------~~---~vs~~~~~ 386 (500)
T PRK09584 322 QALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCSGAFLVLPLGAKFAND-----------AG---IVSVNWLI 386 (500)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHHHHHHHHHHHHHhcCC-----------CC---ccCHHHHH
Confidence 333333444444444 6666665 67788999999999999888776532110 01 12345677
Q ss_pred HHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 105 SAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 105 ~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
...++.++|.++..|....++.+..|+ +.|+++++.++.+..+|..++..+.+
T Consensus 387 ~~~~l~~~ge~~~~p~g~s~~~~~aP~-------~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 387 ASYGLQSIGELMISGLGLAMVAQLVPQ-------RLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHhCcH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999998643 24789999888888788777766654
No 223
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.43 E-value=0.0012 Score=57.14 Aligned_cols=51 Identities=14% Similarity=0.037 Sum_probs=45.7
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccC
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMG 52 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~G 52 (171)
+++-+...+|.|+++.+|++..+.|.....=.+...+..+++|+++||...
T Consensus 273 ~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 273 GFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred HHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345567789999999999999999999999999999999999999999833
No 224
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.42 E-value=0.0022 Score=55.10 Aligned_cols=134 Identities=11% Similarity=0.071 Sum_probs=90.6
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccc
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMR 89 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~ 89 (171)
+..|..+.+| +...+.+...+|...+....+.+-|+.|++ |-|.+.+++.++..+|..+=.++. .|.+++.
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~~------ 137 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPPL------ 137 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Ccccccc------
Confidence 4456666777 788888999999999999999999999998 999999999999999998776665 3433221
Q ss_pred cCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 90 SGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
....+.+.|=.+.+..+-++...-.-.-+-.|++++ |..+...=.++..+|.+++..+-+-+.
T Consensus 138 --------f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q-------ra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 138 --------FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ-------RAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred --------chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch-------hhhhhhHHHhcchHHHHHHhhccceec
Confidence 011355566666666665554442323344554322 455555545555677777666554443
No 225
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.42 E-value=0.0043 Score=46.06 Aligned_cols=104 Identities=11% Similarity=0.174 Sum_probs=71.2
Q ss_pred HHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHH
Q 045901 28 VLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAF 107 (171)
Q Consensus 28 ~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 107 (171)
-..+......++.++++.+-++. |.|+++.+|.+.+.+=..- ...| +.+.++.+-
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~----~~~~--------------------~~~~l~~~s 96 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIAS----FFYP--------------------NSYTLYPAS 96 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHH----HHhh--------------------hHHHHHHHH
Confidence 33444455566667777888886 9999999999988744321 1111 346677777
Q ss_pred HHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 108 GLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 108 ~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
.+.|+|.+...+..-.++.+..++ +++++..++++...+.+.++|....
T Consensus 97 ~l~G~~~a~lW~aqg~ylt~~s~~-------~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 97 ALLGFGAALLWTAQGTYLTSYSTE-------ETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHhhhhHHhhHhhhHHHHHcCCH-------HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999998888875432 1356666776666667777665543
No 226
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.40 E-value=0.00038 Score=62.95 Aligned_cols=156 Identities=16% Similarity=0.309 Sum_probs=114.5
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC-----
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ----- 79 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~----- 79 (171)
+.....+.-+.++++++.++.|.+...+-+++.+..++-.+.+-|. -|-|.+-++.++..+|.+++++-+.+..
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~ 192 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYE 192 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhChHHhcCcchhh
Confidence 3344455666678999999999999999999999999999999997 9999999999999999999887552111
Q ss_pred --------CCC-------------CcccccccCCC---CccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCc
Q 045901 80 --------EKP-------------PVCDQMRSGCE---SATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGA 135 (171)
Q Consensus 80 --------~~~-------------~~~~~~~~~~~---~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~ 135 (171)
..+ +.|....+.|. ..+..-+.+++.+.++.|+|.--..|.-.+++=|-..++
T Consensus 193 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~--- 269 (735)
T KOG3626|consen 193 LEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKK--- 269 (735)
T ss_pred hhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccccc---
Confidence 001 00111111221 111113446778889999998888888888776654433
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 136 KNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 136 ~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
+...+.++.|...-+|.++|++++++..+
T Consensus 270 ----~SplYlgi~~~~~~lGPaiGfllgS~~l~ 298 (735)
T KOG3626|consen 270 ----NSPLYLGILYSMAILGPAIGFLLGSFCLK 298 (735)
T ss_pred ----CCcHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 25778889999999999999999988654
No 227
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.38 E-value=0.0055 Score=53.28 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhhhhhhhHHHhhhccCchhHHH-HHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHH
Q 045901 26 TNVLFIWTAATNFVPILGAFLADSCMGRYPMIG-FGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLY 104 (171)
Q Consensus 26 ~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~-~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (171)
+..+++..+...+..++-|-++|+. |+||-++ +..++..+...++.+.. ++++....
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~---------------------~~~~~~~~ 130 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS---------------------PGQWWLAL 130 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC---------------------cchHHHHH
Confidence 4566777788888889999999998 6666555 44455555555554432 11333333
Q ss_pred HHHHHHHHhccccccchhhhhhhcCCCCCCcc-------------------hhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 105 SAFGLMSLGGGSIRASSLVFGADQLDKGNGAK-------------------NAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 105 ~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~-------------------~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+-.++..++.+......+++.-|..++++..+ ++.++++..++=+...++|+++..++.
T Consensus 131 ~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~ 208 (477)
T PF11700_consen 131 VLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLIS 208 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHH
Confidence 33345667777788888888888877654310 001135666666667778888766543
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.29 E-value=0.0005 Score=60.25 Aligned_cols=69 Identities=20% Similarity=0.283 Sum_probs=55.6
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFT 74 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~ 74 (171)
.+.+.+++|.. ++|+++.+.+.++..--+..++++++.|++||||=-||+.++.+++......+++.+.
T Consensus 29 ~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 29 SLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred ccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 46678888886 8999999999999999999999999999999999555555556666666666555543
No 229
>PTZ00207 hypothetical protein; Provisional
Probab=97.27 E-value=0.002 Score=57.43 Aligned_cols=121 Identities=7% Similarity=0.091 Sum_probs=88.5
Q ss_pred Hhh-CC-ChHHHHH-HHHHHHHHHhhhhhhhHHHhhhccCchh---------HHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 045901 16 REY-NM-ETTAATN-VLFIWTAATNFVPILGAFLADSCMGRYP---------MIGFGCIISLLGMVLLWFTAIFPQEKPP 83 (171)
Q Consensus 16 ~~l-g~-s~~~a~~-~~~~~~~~~~i~~~~~G~laDr~~Gr~~---------~i~~~~~l~~lg~~ll~~~~~~~~~~~~ 83 (171)
+.+ |. ++.+... .++.+.+.++++.+.+|+++.. +-||+ .+.+..+ ..++.+++.+.- |
T Consensus 381 ~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~-~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~--p----- 451 (591)
T PTZ00207 381 TALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW-SQKRRAEDRVPITIALFIPSV-CIITMLTLFLTL--P----- 451 (591)
T ss_pred HHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH-HHhhccccccchhHHHHHHHH-HHHHHHHHHHHC--C-----
Confidence 355 66 3332233 7888999999999999999822 22322 3444455 667777666542 2
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH-hHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS-ATF 162 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~-~~~ 162 (171)
...++++-++.|++.|...+...+...|.|. ++ .++-||..+.+..+|+++= ..+
T Consensus 452 ----------------~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~-------~g~~yN~~~~a~pigs~~~n~~l 507 (591)
T PTZ00207 452 ----------------KAALPLPYFIAAFANGFMAATIALVTRTIFA-KD-------PAKHYNFCFLGSVLSAIFLNRLL 507 (591)
T ss_pred ----------------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc-------hHHHhhHHhHHHHHHHHHHHHHH
Confidence 1358889999999999999999999999998 44 4889999999999997764 567
Q ss_pred HHhhccc
Q 045901 163 IVYIQDN 169 (171)
Q Consensus 163 ~~~i~~~ 169 (171)
.++++|.
T Consensus 508 ~G~~Yd~ 514 (591)
T PTZ00207 508 YGEWYTQ 514 (591)
T ss_pred HHHHHHH
Confidence 8877764
No 230
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.20 E-value=0.00014 Score=62.33 Aligned_cols=144 Identities=16% Similarity=0.175 Sum_probs=102.4
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc---cCchhH-HHHHHHHHHHHHHHHHHhhhcCC-CCCC
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC---MGRYPM-IGFGCIISLLGMVLLWFTAIFPQ-EKPP 83 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~-i~~~~~l~~lg~~ll~~~~~~~~-~~~~ 83 (171)
.+++|++ .+|.+.+..+.+-.+--+...+..++-|..+||+ +||||- +..+..+..++.++...++.+-. +.++
T Consensus 54 y~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~ 132 (498)
T KOG0637|consen 54 YLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN 132 (498)
T ss_pred cccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC
Confidence 4567775 8899999999988888889999999999999974 366665 45666666777776665542110 1110
Q ss_pred cccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 84 VCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
-+ .+ .++.....+.++..+.=+..-..+.++-++.+|...+++. ++| +..++...+.+|..+|+...
T Consensus 133 ----~~-~~--~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~----~~~--Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 133 ----ER-KP--VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK----KTR--ANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred ----cc-cc--cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh----hhc--cchhHHHHHHhcceeeeecc
Confidence 00 00 1224556777888888888888999999999999876542 122 88899899999999888776
Q ss_pred Hhh
Q 045901 164 VYI 166 (171)
Q Consensus 164 ~~i 166 (171)
+|.
T Consensus 200 ~y~ 202 (498)
T KOG0637|consen 200 SYL 202 (498)
T ss_pred ccc
Confidence 654
No 231
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.13 E-value=0.0016 Score=56.83 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=52.2
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc---cCchhHHHHHHHHHHH
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC---MGRYPMIGFGCIISLL 66 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~i~~~~~l~~l 66 (171)
-|+...++|+|+++-.|+|..+++.+...+.++..++.+++|+++||. ..+|......+.+..+
T Consensus 289 ~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 289 NYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred cccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 367788999999986779999999999999999999999999999993 2666665555544443
No 232
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.11 E-value=0.0021 Score=54.41 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=69.6
Q ss_pred HHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHH
Q 045901 33 TAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSL 112 (171)
Q Consensus 33 ~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~ 112 (171)
...-+-+-++.+++-||+ ||||++..+.+++.+-.+++..... +.. -..++++++..+..
T Consensus 391 slaefPGlLIt~~iverl-GRKkTMal~l~~f~iflfll~~c~~------------------rn~-~tvllf~arafisg 450 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERL-GRKKTMALSLILFGIFLFLLTTCKT------------------RNA-YTVLLFTARAFISG 450 (528)
T ss_pred HHhhCCchhHHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHhcC------------------cch-hHHHHHHHHHHHhc
Confidence 455667778999999996 9999999999999988877765431 111 12345667776665
Q ss_pred hccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 045901 113 GGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFI 163 (171)
Q Consensus 113 g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~ 163 (171)
+.+ +++.+.-|.+|.. .|....+--.-...+|+++.|.+.
T Consensus 451 ~fq----vaYvYtPEVyPTa-------vRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 451 AFQ----VAYVYTPEVYPTA-------VRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hhe----EEEEecCcccchh-------hhhcchhhhhhHHhhhhhhhhHHH
Confidence 544 4455556777643 366666666667789999988665
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.11 E-value=0.001 Score=59.74 Aligned_cols=69 Identities=20% Similarity=0.278 Sum_probs=57.8
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHH-HHhhhhhhhHHHhhhccC--chhHHHHHHHHHHHHHHHH
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTA-ATNFVPILGAFLADSCMG--RYPMIGFGCIISLLGMVLL 71 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~i~~~~~G~laDr~~G--r~~~i~~~~~l~~lg~~ll 71 (171)
.+++...++|.|+++++|+++.+++.+.....+ ...++.+++|++.||+ + .|+.+.+++++..++.++.
T Consensus 345 ~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~~~~~~~~ 416 (633)
T TIGR00805 345 AFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLSTLSYLLC 416 (633)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHHHHHHHHH
Confidence 356778899999999999999999999987765 5678999999999997 7 5678888888888776553
No 234
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.10 E-value=0.0061 Score=40.67 Aligned_cols=65 Identities=9% Similarity=0.065 Sum_probs=58.2
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhh
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTA 75 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~ 75 (171)
+.+.+.++.++|..+++.+-+...++..++.+...++.++. .+++.+..+.++..+..+.+.+..
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55677789999999999999999999999999999999996 888999999999998888887654
No 235
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.94 E-value=0.0054 Score=52.40 Aligned_cols=131 Identities=10% Similarity=0.156 Sum_probs=98.3
Q ss_pred HHHHhhHhh---CCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccc
Q 045901 10 MILYLCREY---NMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCD 86 (171)
Q Consensus 10 l~~yl~~~l---g~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~ 86 (171)
.+.|.+..+ +.++...|.+.+.....-.+.-.+..++-+|+ |.|+.++++.++..+=-+.+.++.
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i~~iRi~~~~~~~----------- 310 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVIMAIRIIGSGFAT----------- 310 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHHHHHHHHHHhhhc-----------
Confidence 456666433 45566778888888888888899999999997 999999999999887766665543
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHH-HHHHHHHHHHHHhHHHHh
Q 045901 87 QMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSW-YYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~-~y~~~niG~~i~~~~~~~ 165 (171)
+.+.+...-.+-++-.+.....+--++++.++++ ...+.+.+ +..+..+|..+-..+.|+
T Consensus 311 ------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r-------lsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 311 ------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR-------LSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp ------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG-------GHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh-------HHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 3556667778888888888888999999998632 24566665 346677888888889999
Q ss_pred hccccC
Q 045901 166 IQDNLG 171 (171)
Q Consensus 166 i~~~~g 171 (171)
++|++|
T Consensus 372 lyd~~G 377 (412)
T PF01306_consen 372 LYDRIG 377 (412)
T ss_dssp HHHHHH
T ss_pred hHhhcC
Confidence 998765
No 236
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.93 E-value=0.0075 Score=51.50 Aligned_cols=129 Identities=20% Similarity=0.123 Sum_probs=85.5
Q ss_pred cHHHHHHHhhHhhCC---Ch----HHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcC
Q 045901 6 LMPNMILYLCREYNM---ET----TAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFP 78 (171)
Q Consensus 6 v~~~l~~yl~~~lg~---s~----~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~ 78 (171)
+...+|+|+++..+- ++ +..+...++......+..++-|-++|+..-|||.+-+..++..+....+.+..
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~--- 110 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP--- 110 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC---
Confidence 345789999986654 33 34455566677778888889999999995556666677777776666665543
Q ss_pred CCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 045901 79 QEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSML 158 (171)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i 158 (171)
. ...++...+-+.+..++..+.+...+++..|..++++.. |.+..+| -.-++|+.+
T Consensus 111 ~-----------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~-----riS~lg~--~~gylgs~i 166 (438)
T COG2270 111 P-----------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMG-----RISGLGW--ALGYLGSVI 166 (438)
T ss_pred C-----------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccC-----ccccccc--ccccccchH
Confidence 1 124555556667899999999999999999987765431 3333333 344555555
Q ss_pred HhH
Q 045901 159 SAT 161 (171)
Q Consensus 159 ~~~ 161 (171)
..+
T Consensus 167 ~li 169 (438)
T COG2270 167 LLI 169 (438)
T ss_pred HHH
Confidence 443
No 237
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.78 E-value=0.013 Score=50.84 Aligned_cols=125 Identities=15% Similarity=0.204 Sum_probs=97.6
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
..|+..++++++.+.+...+.......++.++...+=-+.+|-|+.+..|+....+...+..++.
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--------------- 329 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--------------- 329 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc---------------
Confidence 45667789999999999999999999999998884444445999999999999999999888875
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+.|..+.+..+. ...+...|...++.+.+.+.++ +++.+.|......+...+++.+-+.+
T Consensus 330 --------~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~e-------~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 330 --------ETWMMFAAGVVV-ALAGIVFPAIRAFASILVSPEE-------QGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred --------cchhhhHHHHHH-HhhcchhHHHHhHHHhhccccc-------ccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 334555554444 4447788888888888765432 58899999888888888888766655
No 238
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.43 E-value=1.7e-05 Score=67.04 Aligned_cols=133 Identities=11% Similarity=0.107 Sum_probs=77.2
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHH-HhhhcCCCCCCccccccc
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLW-FTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~-~~~~~~~~~~~~~~~~~~ 90 (171)
.++.+..+.++. -.......+...++.+++.++.||+ |||++++++..+..+..+.+. .....+...
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------- 344 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAICSLILGIIFFLGVSSS--------- 344 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc---------
Confidence 333445666666 2233344466677778888999997 999999999998888776664 111000000
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcc-ccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhccc
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGG-SIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDN 169 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G-~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~ 169 (171)
+..+.. ..+...+.....+ +..+....+.+|.+|.+. |.+..++.+...++++++++.+.+++.++
T Consensus 345 -----~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~-------R~~~~~~~~~~~~i~~~i~~~~~~~~~~~ 411 (451)
T PF00083_consen 345 -----SWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKV-------RSTGIGLSYAVGRIGGFIIPFLFPYLFNN 411 (451)
T ss_pred -----cccccc-cceeeeeccccccccccccccccccccccccc-------ccccccccccccccccccccccccccccc
Confidence 000111 1111122212222 334555577799997543 57777777777777777777766666554
No 239
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.27 E-value=0.0099 Score=48.51 Aligned_cols=63 Identities=10% Similarity=-0.007 Sum_probs=53.2
Q ss_pred hhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 98 SQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 98 ~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
.+++.++++.++++.|.+..++..+++++|.-++++ +.+..|+......+|++++|.+.+.+.
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~-------~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET-------AASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch-------HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 368899999999999999999999999999875432 566777877888899999999888665
No 240
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.26 E-value=0.15 Score=44.36 Aligned_cols=57 Identities=16% Similarity=0.246 Sum_probs=44.4
Q ss_pred hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhh
Q 045901 17 EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTA 75 (171)
Q Consensus 17 ~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~ 75 (171)
..|.+... .....+......++..++.++-||+ |||+.++.+.....++.+++....
T Consensus 324 ~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 324 SAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGMSICLVILAVVG 380 (513)
T ss_pred hcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHHHHHHHHHHHHH
Confidence 44555443 4445555667777788889999998 999999999999999998887654
No 241
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.07 E-value=0.13 Score=44.81 Aligned_cols=133 Identities=8% Similarity=-0.013 Sum_probs=85.2
Q ss_pred HHHHHHHHHHhhhhhhhHHHhhhccCc-hhHHHHHHHHHHHHHHHHHHhhhcCC-CCCCcccccccCCCCccchhHHHHH
Q 045901 27 NVLFIWTAATNFVPILGAFLADSCMGR-YPMIGFGCIISLLGMVLLWFTAIFPQ-EKPPVCDQMRSGCESATASQLMLLY 104 (171)
Q Consensus 27 ~~~~~~~~~~~i~~~~~G~laDr~~Gr-~~~i~~~~~l~~lg~~ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (171)
.....+.+.+.+.+++--++.+|+ |+ |+.-.++.++..++.+...+....+. ..+ ........ .+.....+..+
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~--~~~~~~~~-~~~~~~~~~~l 384 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGW-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRY--YDGDGESL-PPPTGIKASAL 384 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc--cccccccc-CcchhhHHHHH
Confidence 334445555567777888899997 85 66668998888888877765432110 000 00000000 11111134455
Q ss_pred HHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 105 SAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 105 ~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
+-..++|+.++.....-.+++++..++++. +.+..+++++.++-+..++.....+.+.+
T Consensus 385 ~~~~~~Gi~~A~~~siPfal~s~~~~~~~~-----~~G~~mgilN~~I~lpQii~sl~~g~~~~ 443 (477)
T TIGR01301 385 IVFAILGIPLAITYSIPFALASIRSSNLGA-----GQGLSMGVLNLAIVIPQIIVSLGSGPWDQ 443 (477)
T ss_pred HHHHHhhHHHHHHHHHhHHHHHHHccccCC-----CCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 556789999999999999999998874332 25888999989999988888776666444
No 242
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.05 E-value=0.058 Score=48.28 Aligned_cols=135 Identities=10% Similarity=-0.041 Sum_probs=82.1
Q ss_pred eeccHHHHHHHhhHhhCCChH---HHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHH-HHHHHHHHHHHHHHHHhhhcC
Q 045901 3 SNGLMPNMILYLCREYNMETT---AATNVLFIWTAATNFVPILGAFLADSCMGRYPMI-GFGCIISLLGMVLLWFTAIFP 78 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~---~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i-~~~~~l~~lg~~ll~~~~~~~ 78 (171)
||++..+.|......++-++. +++........+..++.++.|++.-+. +|.|-. +++.++..++...++... |
T Consensus 326 ~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~~~~~~ta~~Gama~~~--~ 402 (599)
T PF06609_consen 326 FFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIFGSVLMTAFCGAMAAVR--P 402 (599)
T ss_pred HHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHHHHHHHHHHHHHHHHcc--C
Confidence 445555555555555555543 466777777778888888899999876 666655 577777766666554432 1
Q ss_pred CCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 045901 79 QEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSML 158 (171)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i 158 (171)
. +......-.++.++|.|+....... .-|+.- |+| ..+...+..-....+|..|
T Consensus 403 ~-------------------n~~~~i~~~~l~g~giG~~~~~~~~--~~ql~~--p~~---~ig~a~gL~~s~R~~GGsI 456 (599)
T PF06609_consen 403 D-------------------NKNAAIAFLVLAGFGIGGILVPAIV--IAQLIV--PDE---DIGTATGLTGSIRSIGGSI 456 (599)
T ss_pred C-------------------CcchHHHHHHHHHHhHHHHHHHHHH--eeEeee--Cch---HHHHHHHHHHHHHHHhhHH
Confidence 0 1111223345677777766544443 334432 221 3788888888888888888
Q ss_pred HhHHHHhh
Q 045901 159 SATFIVYI 166 (171)
Q Consensus 159 ~~~~~~~i 166 (171)
+..+..-+
T Consensus 457 g~aIy~~I 464 (599)
T PF06609_consen 457 GYAIYNAI 464 (599)
T ss_pred HHHHHHHH
Confidence 87655433
No 243
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.82 E-value=0.033 Score=47.35 Aligned_cols=132 Identities=12% Similarity=0.089 Sum_probs=91.9
Q ss_pred HHHHHHHh-hHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchh-HHHHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 045901 7 MPNMILYL-CREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYP-MIGFGCIISLLGMVLLWFTAIFPQEKPPV 84 (171)
Q Consensus 7 ~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~-~i~~~~~l~~lg~~ll~~~~~~~~~~~~~ 84 (171)
..+...++ ++.+|+++.|.|.+.+.-.....+....-....||..|.-+ .+..++.+..-..+++..+.
T Consensus 280 ~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~--------- 350 (451)
T KOG2615|consen 280 LENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR--------- 350 (451)
T ss_pred HHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc---------
Confidence 34445555 45799999999999988888888878788888888744433 44445554444444443332
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 85 CDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
....++.+..+-.+..+...|+...++....+. + +|+...+++-....++-++||.+.+
T Consensus 351 --------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~----~---qrG~~~Gi~~Sl~alaRaiGPlv~g 409 (451)
T KOG2615|consen 351 --------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQ----S---QRGTLNGIFRSLGALARAIGPLVSG 409 (451)
T ss_pred --------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCc----c---cchHHHHHHHHHHHHHHHhhhhhhh
Confidence 235677888888999888888888777665432 1 2688888887788888888888776
Q ss_pred hhcc
Q 045901 165 YIQD 168 (171)
Q Consensus 165 ~i~~ 168 (171)
.++.
T Consensus 410 ~i~~ 413 (451)
T KOG2615|consen 410 VIFS 413 (451)
T ss_pred eeEE
Confidence 6553
No 244
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.67 E-value=0.2 Score=42.85 Aligned_cols=68 Identities=18% Similarity=0.161 Sum_probs=52.0
Q ss_pred HHHHHHHhhHh-hCCChHHHHHHHHHHH-HHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhh
Q 045901 7 MPNMILYLCRE-YNMETTAATNVLFIWT-AATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTA 75 (171)
Q Consensus 7 ~~~l~~yl~~~-lg~s~~~a~~~~~~~~-~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~ 75 (171)
.+++..|++++ .|+++.|...-+.... -.....-++...+.|.. +-|++++++.+...+...++.+..
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~ 92 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGT 92 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHC
Confidence 46788999997 8999999876554443 34444555788999996 899999988888888877776654
No 245
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.58 E-value=0.0043 Score=50.64 Aligned_cols=88 Identities=17% Similarity=0.116 Sum_probs=64.3
Q ss_pred HhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCC
Q 045901 13 YLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGC 92 (171)
Q Consensus 13 yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~ 92 (171)
|+...+++-..+.+.+.-+-.+.+++...+.|.|+|+- |||+.-+.-++.+. +..+....
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYi----LsCiTKhS--------------- 121 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYI----LSCITKHS--------------- 121 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHH----HHHHhhcC---------------
Confidence 44456788888888888877888888889999999997 99997554444444 44433211
Q ss_pred CCccchhHHHHHHHHHHHHHhccccccchhhhh
Q 045901 93 ESATASQLMLLYSAFGLMSLGGGSIRASSLVFG 125 (171)
Q Consensus 93 ~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ 125 (171)
.++-.+++|+++-|+.+........+..
T Consensus 122 -----pqYkVLmVGR~LGGiaTsLLFSaFEsWl 149 (454)
T KOG4332|consen 122 -----PQYKVLMVGRVLGGIATSLLFSAFESWL 149 (454)
T ss_pred -----CceEEEeehhhhhhHHHHHHHHHHHHHH
Confidence 1466788999999999888777666544
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.24 E-value=1.2 Score=38.53 Aligned_cols=132 Identities=11% Similarity=-0.013 Sum_probs=91.2
Q ss_pred HHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccc
Q 045901 8 PNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQ 87 (171)
Q Consensus 8 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~ 87 (171)
+.++.|+..+ |+++...+..-+.-.+....+.++..++-+|+ |..|+=..+......-..+...+-..|.. |
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~-~----- 350 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGS-P----- 350 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCC-C-----
Confidence 4677888877 99999999999999999999999999999998 99999999998887666555443222210 0
Q ss_pred cccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 88 MRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
.+..+...++.+.++-=+|.=++.-+...++-|..+ + .+|+...+.-.-.-|+--++.+.
T Consensus 351 -------~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~----~---~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 351 -------FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVP----E---SERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred -------chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCC----H---HHhhHHHHHHHHHHHHHHHHHHH
Confidence 012345667777777777776666666655555433 2 13676666655555555554443
No 247
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.16 E-value=0.0055 Score=54.09 Aligned_cols=160 Identities=13% Similarity=0.179 Sum_probs=0.0
Q ss_pred eeccHHHHHHHhhHhhCCChHHHHHHHHHHHH-HHhhhhhhhHHHhhhc-cCchhHHHHHHHHHHHHHHHHHH-----hh
Q 045901 3 SNGLMPNMILYLCREYNMETTAATNVLFIWTA-ATNFVPILGAFLADSC-MGRYPMIGFGCIISLLGMVLLWF-----TA 75 (171)
Q Consensus 3 ~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~i~~~~~G~laDr~-~Gr~~~i~~~~~l~~lg~~ll~~-----~~ 75 (171)
.-|...++|-|++.+++.++.+|+.+.+...+ +..++.++||++-.|+ +..|+++....+...++.++... ..
T Consensus 321 ~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~ 400 (539)
T PF03137_consen 321 VSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCP 400 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCC
Confidence 45677899999999999999999999977765 6778888999999997 45667777766666666554111 01
Q ss_pred h-------cCC------CC----CCccccc---------ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcC
Q 045901 76 I-------FPQ------EK----PPVCDQM---------RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQL 129 (171)
Q Consensus 76 ~-------~~~------~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~ 129 (171)
. .|. .. ..+|+.. ...|+..-..+...|++.+++..+-.+...+......-+..
T Consensus 401 ~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V 480 (539)
T PF03137_consen 401 NPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCV 480 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccC
Confidence 0 000 00 0023221 23554431224556666655555555544444443333444
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHH-HHHHHHhHHHHhhccc
Q 045901 130 DKGNGAKNAGALQSYFSWYYVSIA-AGSMLSATFIVYIQDN 169 (171)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~y~~~n-iG~~i~~~~~~~i~~~ 169 (171)
++ +| |..+.++.+.... +|.+=+|++.+.+.|+
T Consensus 481 ~~---~~----rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 481 PP---EQ----RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -----------------------------------------
T ss_pred Ch---hh----cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 32 22 4556666544444 6888889988888763
No 248
>PRK03612 spermidine synthase; Provisional
Probab=94.80 E-value=0.6 Score=41.18 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=32.1
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSC 50 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~ 50 (171)
-.+...+|-+..+.+.++++|..+..++..++++++++-
T Consensus 39 r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~ 77 (521)
T PRK03612 39 TLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA 77 (521)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 344456789999999999999999999999988887553
No 249
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=94.43 E-value=1.4 Score=38.69 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=76.4
Q ss_pred CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCc-hh------HHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCC
Q 045901 20 METTAATNVLFIWTAATNFVPILGAFLADSCMGR-YP------MIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGC 92 (171)
Q Consensus 20 ~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr-~~------~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~ 92 (171)
.++.+-..++..+ ..+..++.+++=.|. .| || =+.+|+++..++++++.++......+
T Consensus 308 ip~~~~qslNp~~---ii~l~P~~a~lw~~l-~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~----------- 372 (493)
T PRK15462 308 VPTAMFQSINAFA---VMLCGVFLAWVVKES-VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMY----------- 372 (493)
T ss_pred eCHHHHHhHhHHH---HHHHHHHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----------
Confidence 4444444444433 344444555565554 33 22 16789999999998887765322100
Q ss_pred CCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHH-HHHHHHHhHHHHhh
Q 045901 93 ESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSI-AAGSMLSATFIVYI 166 (171)
Q Consensus 93 ~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~-niG~~i~~~~~~~i 166 (171)
. ..+.+.+.....+.++|.=...|...+++++.-|+ +.++..++.++... .+|..++..+.++.
T Consensus 373 --~-~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~-------~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 373 --G-HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIP-------GVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred --C-CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 12445577778889999999999999999998642 24677888776533 56666665555544
No 250
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.20 E-value=0.87 Score=41.34 Aligned_cols=136 Identities=10% Similarity=-0.090 Sum_probs=104.4
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccccc
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRS 90 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~ 90 (171)
.++..--.+............+.....+.++.....+|-..++......-.+...++.+...+.. ++..
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a~---------- 76 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGAI---------- 76 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hccC----------
Confidence 34444445666677888999999999999999999999998888899888888888887776655 2211
Q ss_pred CCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhh
Q 045901 91 GCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYI 166 (171)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i 166 (171)
+...+.....+.++.+.++.++..++.+...+++.+..++ +++++...+|+|..+.+.+.+. ++..+
T Consensus 77 ----~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~----~~~~~~~s~F~~fY~~iNiGSl-is~~i 143 (654)
T TIGR00926 77 ----PSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE----RQLSLRSRFFSFFYFAINAGSL-ISTII 143 (654)
T ss_pred ----cccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc----cchhHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 1122334456688889999999999999999999875432 6677899999999999988644 44443
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=93.68 E-value=0.14 Score=44.59 Aligned_cols=139 Identities=15% Similarity=0.087 Sum_probs=83.9
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHH--------HHHHHHHHHhh-hhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHH
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATN--------VLFIWTAATNF-VPILGAFLADSCMGRYPMIGFGCIISLLGMVLLW 72 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~--------~~~~~~~~~~i-~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~ 72 (171)
++|+..-+....++ .+|+.+.+... ........+.+ +..+..++.|+. |||+.-+-+.+++.+-.+.+.
T Consensus 319 afy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq~~GF~~~~i~~~~~~ 396 (538)
T KOG0252|consen 319 AFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQLMGFFIMTIFFFVIA 396 (538)
T ss_pred hhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHHHhhHHHHHHHHHHHc
Confidence 45666666655554 34444443333 33333444444 666788899997 999999999999997776554
Q ss_pred HhhhcCCCCCCcccccccCCCCccchhH-HHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHH
Q 045901 73 FTAIFPQEKPPVCDQMRSGCESATASQL-MLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVS 151 (171)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~ 151 (171)
..- ++ ....... ...-+..++..+|=+...-.++ +|.++. +-|+.++++--.+
T Consensus 397 ~~y----------~~------~~~~~Gf~v~y~l~~ff~NFGPn~ttfivp---aE~FPa-------rvR~t~hGIsAA~ 450 (538)
T KOG0252|consen 397 GPY----------NQ------LENTIGFVVLYSLTFFFGNFGPNATTFIVP---AEIFPA-------RVRSTCHGISAAS 450 (538)
T ss_pred CCc----------cc------ccccCceeehHHHHHHHHhcCCCceeEEee---hhhchH-------HHhhhhhhHHHHh
Confidence 321 10 0001111 1222333444455444333333 677753 3588999987777
Q ss_pred HHHHHHHHhHHHHhhcc
Q 045901 152 IAAGSMLSATFIVYIQD 168 (171)
Q Consensus 152 ~niG~~i~~~~~~~i~~ 168 (171)
-=+|++++.....++.+
T Consensus 451 GK~GAivg~~~F~~~t~ 467 (538)
T KOG0252|consen 451 GKAGAIVGAFGFLYLTD 467 (538)
T ss_pred ccchHHHHHHHhhHhhh
Confidence 77899999988888877
No 252
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=93.45 E-value=1.7 Score=37.95 Aligned_cols=132 Identities=11% Similarity=0.075 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHhhh-hhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC---CCCCc-ccccccCCCCcc-
Q 045901 23 TAATNVLFIWTAATNFV-PILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ---EKPPV-CDQMRSGCESAT- 96 (171)
Q Consensus 23 ~~a~~~~~~~~~~~~i~-~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~---~~~~~-~~~~~~~~~~~~- 96 (171)
+....+.........+. .++-+++++|+ +|+|.+.+-...+.+-.++..+.- .|. .+|+. |++... ..+.
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~--~~~~~ 118 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTVISPFLGFFALFAFVI-YPLSDLLHPTALADKLLS--LLPPG 118 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHh--hcchh
Confidence 34455555444444444 67899999998 999999887777666655554432 222 22211 000000 0000
Q ss_pred ---------chhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhc
Q 045901 97 ---------ASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQ 167 (171)
Q Consensus 97 ---------~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~ 167 (171)
.+....|++..-+.+.-. ..-..-++..|.+..+ +..|+|..+..+.|+|.++++.+..++.
T Consensus 119 ~~~~i~~~~~W~~~~FYv~~elw~~~v--vS~lFW~fandi~t~~-------qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 119 FMGFIAILRIWSFALFYVMAELWGSVV--LSLLFWGFANQITTID-------EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred hHHHHHHHhhhhHHHHHHHHHHHHHHH--HHHHHHHHHHhcCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111123332222111110 1112334557877542 2578999999999999999998888765
No 253
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=93.42 E-value=0.21 Score=43.33 Aligned_cols=135 Identities=13% Similarity=0.048 Sum_probs=71.4
Q ss_pred HhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhcc---CchhHHHHHHHHHHHHHHHHHHhhh-cCCCCCCccccc
Q 045901 13 YLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCM---GRYPMIGFGCIISLLGMVLLWFTAI-FPQEKPPVCDQM 88 (171)
Q Consensus 13 yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~---Gr~~~i~~~~~l~~lg~~ll~~~~~-~~~~~~~~~~~~ 88 (171)
|..+-.|.+..+......++..+..++.++||.++||+- -|-....+..+....|..+.+..-. .|...
T Consensus 273 ~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~------- 345 (493)
T KOG1330|consen 273 YSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFT------- 345 (493)
T ss_pred HHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhh-------
Confidence 334445678888888889999999999999999999920 2223444444444444332221110 11100
Q ss_pred ccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHH-HHHHHHhHHHHhhc
Q 045901 89 RSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIA-AGSMLSATFIVYIQ 167 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~n-iG~~i~~~~~~~i~ 167 (171)
....-+.+.+++++..+...+++.- .+...+..++ + +|..++.+-+...- .|.+-+|-+.+.++
T Consensus 346 ----~~s~~~~~il~~~g~~~~~~~~a~n----~~i~l~vV~p----~---~Rt~a~a~~~~~~h~fgd~~~p~ivGils 410 (493)
T KOG1330|consen 346 ----SSSMIFGLILFLVGETISWFNWATN----NPIFLEVVPP----S---RRTTAYALDTVFEHIFGDAASPYIVGILS 410 (493)
T ss_pred ----hHHHHHHHHHHHHHHHHHhcccccc----cceeeEecCc----c---cccHHHHHHHHHHHHhccCCCcceehhHH
Confidence 0000122344445555555544333 2233354432 2 36777777655444 34444454666666
Q ss_pred cc
Q 045901 168 DN 169 (171)
Q Consensus 168 ~~ 169 (171)
|+
T Consensus 411 d~ 412 (493)
T KOG1330|consen 411 DK 412 (493)
T ss_pred HH
Confidence 54
No 254
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=91.44 E-value=4.6 Score=34.93 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=63.4
Q ss_pred HHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhc
Q 045901 35 ATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGG 114 (171)
Q Consensus 35 ~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~ 114 (171)
.........+.+-|+. |||.....+.++..++.+....... ... .........++...++.+
T Consensus 362 ~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~~~~~~~~- 423 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPD---DLG-------------GWLHWILPLLGKFFIGSA- 423 (521)
T ss_pred HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhc---cch-------------hHHHHHHHHHHHHHHHHH-
Confidence 3334444568999997 9999999999999999887766531 000 000122222333333333
Q ss_pred cccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 115 GSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 115 G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
......+.+|.+++. .|..+.+.......+|+++++.+.-
T Consensus 424 ---~~~~~~~~~el~pt~-------~r~~~~~~~~~~~~~~~i~ap~~~~ 463 (521)
T KOG0255|consen 424 ---FNLIFLYSAELIPTV-------VRNTAVGAISAAARLGSILAPLFPL 463 (521)
T ss_pred ---HHHHHHHHHhhccHH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333366668888643 3677777777778888888876543
No 255
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.05 E-value=5.5 Score=34.73 Aligned_cols=91 Identities=21% Similarity=0.279 Sum_probs=58.0
Q ss_pred HHHHhhhhhhhHHHh---hhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCc--cchhHHHHHHHH
Q 045901 33 TAATNFVPILGAFLA---DSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESA--TASQLMLLYSAF 107 (171)
Q Consensus 33 ~~~~~i~~~~~G~la---Dr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 107 (171)
..+..++.+..+.++ +|+ ||++++.++.+++.++.++.-++ .|...|- .+..+.+ .+++.....+--
T Consensus 289 g~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~~~~~~~~li~l~--~p~dap~-----~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGF-GRKPTVLIGIIIHLIGFLLIHLS--FPNDAPL-----RPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhc-ccCcchhHHHHHHHHHHHHHhcc--ccccCCC-----CCCcccccccccchhHHHHHH
Confidence 345555566666666 555 99999999999999998765443 4433321 1111111 111232333333
Q ss_pred HHHHHhccccccchhhhhhhcCCC
Q 045901 108 GLMSLGGGSIRASSLVFGADQLDK 131 (171)
Q Consensus 108 ~l~g~g~G~~~~~~~~~~ad~~~~ 131 (171)
.+.|++-+..+......+++.+++
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~~~ 384 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLYPD 384 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcC
Confidence 578999999999999999998843
No 256
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=88.91 E-value=0.69 Score=41.12 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=66.3
Q ss_pred HhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCc
Q 045901 16 REYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESA 95 (171)
Q Consensus 16 ~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 95 (171)
++++-.+.--|.+...--.+-.+.-++.++|-.++ |+-+++.+++....+=++..+...
T Consensus 399 ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~-------------------- 457 (618)
T KOG3762|consen 399 EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ-------------------- 457 (618)
T ss_pred hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc--------------------
Confidence 34554444444333333344555666888999998 999999999999988877666554
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCC
Q 045901 96 TASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKG 132 (171)
Q Consensus 96 ~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~ 132 (171)
++|..+.-=++.++-.+.+..++.+++++..+++
T Consensus 458 ---n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~ 491 (618)
T KOG3762|consen 458 ---NPWMVLPIEILQGITHALIWAAIISYASHVAPPG 491 (618)
T ss_pred ---CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 3444444446899999999999999999988754
No 257
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=88.58 E-value=0.78 Score=42.06 Aligned_cols=69 Identities=16% Similarity=0.217 Sum_probs=50.6
Q ss_pred ceeccHHHHHHHhhHhhCCChHHHHHHHHHHHH-HHhhhhhhhHHHhhhc-cCchhHHHHHHHHHHHHHHH
Q 045901 2 ASNGLMPNMILYLCREYNMETTAATNVLFIWTA-ATNFVPILGAFLADSC-MGRYPMIGFGCIISLLGMVL 70 (171)
Q Consensus 2 ~~~gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~i~~~~~G~laDr~-~Gr~~~i~~~~~l~~lg~~l 70 (171)
.+-|...++|-|+..++|.++..|..+.....+ +..++.++||++-.|+ +..|++....++...+..+.
T Consensus 407 ~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 407 AITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999966654 5566777899999886 23445555555555544443
No 258
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.54 E-value=3.4 Score=28.80 Aligned_cols=48 Identities=17% Similarity=-0.035 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 045901 26 TNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWF 73 (171)
Q Consensus 26 ~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~ 73 (171)
+.-++.-.+...+.....||+-|||.|.++--+|..++...+...+.+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 333444445555556688999999999999888887777766655544
No 259
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.34 E-value=6.5 Score=34.31 Aligned_cols=99 Identities=10% Similarity=0.079 Sum_probs=63.5
Q ss_pred HHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHH
Q 045901 29 LFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFG 108 (171)
Q Consensus 29 ~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 108 (171)
..+-.....++.++++.+-|.. |.|..+.++...+..-.+-.... +-+.++.+=.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~------------------------N~y~~yfssa 110 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP------------------------NSYYLYFSSA 110 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc------------------------chHHHHHHHH
Confidence 4455566777888999999997 99999999998887544333221 2345677778
Q ss_pred HHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 045901 109 LMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS 159 (171)
Q Consensus 109 l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~ 159 (171)
+.|+|.+.....--.+.++-..+ +++++..++.+...+.+.++|
T Consensus 111 llG~Gaallw~GqG~ylt~~st~-------~tie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 111 LLGFGAALLWTGQGGYLTSNSTR-------ETIERNISIFWAIGQSSLIIG 154 (461)
T ss_pred HhhhhHHheecccceehhhcCCh-------hhHHHHHHHHHHHHHHHHHhh
Confidence 99999988776666555553321 124444444434444444444
No 260
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=84.34 E-value=2.3 Score=36.99 Aligned_cols=52 Identities=13% Similarity=0.021 Sum_probs=41.8
Q ss_pred hhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHH
Q 045901 17 EYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGM 68 (171)
Q Consensus 17 ~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~ 68 (171)
.-|+++..+|.+-....+..+++.++.|.++||.-.-|+++++......++.
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT 346 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 4578888999999999999999999999999998444555666666666663
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=77.40 E-value=16 Score=31.68 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=73.7
Q ss_pred ccHHHHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhh-----hccCchhHHHHHHHHHHHHHHHHHHhhhcCC
Q 045901 5 GLMPNMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLAD-----SCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laD-----r~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~ 79 (171)
|....+|..++ .-|.|-++.+..-..+ -=.-.-++..++-| |+ ||||.-++=+- +.+|.+++.++-..+.
T Consensus 48 GL~~~iP~lL~-ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-GrrksWvvp~q-~llG~~mllLs~~v~~ 122 (510)
T KOG3574|consen 48 GLIGAIPLLLQ-AKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKSWVVPCQ-YLLGLFMLLLSYLVDR 122 (510)
T ss_pred hHhhhhHHHhc-CCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccceeeehH-HHHHHHHHHHhhCCCc
Confidence 44554555555 3466666665544333 22334567888888 87 99998765432 3456665655542221
Q ss_pred CCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 045901 80 EKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS 159 (171)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~ 159 (171)
. ...++ ...+....-..+.++-+..+...-++-..--..+++++ .+.+.+-...+.|.|.+.+
T Consensus 123 ~--------~g~ng--~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~-------lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 123 G--------LGGNG--GLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN-------LGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred c--------cccCC--CCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh-------cCchhHHHHHHHhhhHHhh
Confidence 1 11011 11122222223345566666566666665555554332 5667777777888888887
Q ss_pred hHH
Q 045901 160 ATF 162 (171)
Q Consensus 160 ~~~ 162 (171)
.++
T Consensus 186 ~~i 188 (510)
T KOG3574|consen 186 NVV 188 (510)
T ss_pred cce
Confidence 653
No 262
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=76.88 E-value=13 Score=22.11 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=25.3
Q ss_pred HHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHH
Q 045901 32 WTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGM 68 (171)
Q Consensus 32 ~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~ 68 (171)
......+.....|+..|++++.++...+..++..+..
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~ 45 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAA 45 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 3455666677889999999999766665555544443
No 263
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=75.60 E-value=14 Score=24.68 Aligned_cols=47 Identities=21% Similarity=0.133 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHH
Q 045901 22 TTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMV 69 (171)
Q Consensus 22 ~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ 69 (171)
....+........+..+++.+.|++.|.. |.+....+...+..++.+
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 132 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFI 132 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHH
Confidence 34455566677788899999999999997 877777766665555544
No 264
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=72.63 E-value=28 Score=28.94 Aligned_cols=105 Identities=12% Similarity=0.126 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHHhhhccCchh---HHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHH
Q 045901 26 TNVLFIWTAATNFVPILGAFLADSCMGRYP---MIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLML 102 (171)
Q Consensus 26 ~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~---~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (171)
|.+...|..++++++-+...+..|- |.| .+.+..++......+..+... ..| +.++...
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~Lpilt~~---vsP-------------~kes~~~ 346 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALLLPILTSS---VSP-------------SKESPSE 346 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHHHHHHHhc---cCC-------------CcCCchH
Confidence 5566666666655555554444442 222 344554444444433333221 111 1123334
Q ss_pred HHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 045901 103 LYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAG 155 (171)
Q Consensus 103 ~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG 155 (171)
-+++.+++-...|.+.|.+.-+=.+..|++ .|...+|||-.-.|+-
T Consensus 347 s~i~F~~~E~cvGlfwPSimkmRsqyIPEe-------arstimNfFRvPLnif 392 (454)
T KOG4332|consen 347 SLIGFCLFEACVGLFWPSIMKMRSQYIPEE-------ARSTIMNFFRVPLNIF 392 (454)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHhhCCHH-------HHhhhhhheechhhHh
Confidence 477888888999999999887665554432 2688888887666653
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=72.37 E-value=7.9 Score=33.15 Aligned_cols=133 Identities=14% Similarity=0.095 Sum_probs=71.9
Q ss_pred HhhC---CChHHHHHHHHHHHHHHhhhhhhh-HHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccC
Q 045901 16 REYN---METTAATNVLFIWTAATNFVPILG-AFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSG 91 (171)
Q Consensus 16 ~~lg---~s~~~a~~~~~~~~~~~~i~~~~~-G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~ 91 (171)
++++ +|+...+.+..+..++..++..+. -+++|+ .-|+++....++..+..+.-...- . ..+ ..
T Consensus 245 ~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~--~~R~~~~~t~~~~~~~~l~~~~lv--~--~~n------~~ 312 (433)
T PF03092_consen 245 DALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNW--SWRRIFVVTTLVSVLASLFDLLLV--T--RWN------LD 312 (433)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHhcccEEEE--E--EEe------ee
Confidence 3455 888877777755555555555543 333333 456666666655554433211100 0 000 00
Q ss_pred CCCccchhHHHHHH-HHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Q 045901 92 CESATASQLMLLYS-AFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQDNL 170 (171)
Q Consensus 92 ~~~~~~~~~~~~~~-~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~~~ 170 (171)
-+.++ + .+.. .-++..+-.+...-+...+.++..|+..+ ++.|...-...|+|..++..++..+.+.+
T Consensus 313 ~Gi~d--~--~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~E-------gt~yall~s~~Nlg~~~s~~lg~~l~~~~ 381 (433)
T PF03092_consen 313 LGIPD--Q--WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSE-------GTVYALLASFSNLGSSVSSTLGAFLMELF 381 (433)
T ss_pred eCcCC--e--EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCch-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 00111 1 1111 11233333344444555567888876432 88999999999999999999988887654
Q ss_pred C
Q 045901 171 G 171 (171)
Q Consensus 171 g 171 (171)
|
T Consensus 382 ~ 382 (433)
T PF03092_consen 382 G 382 (433)
T ss_pred C
Confidence 3
No 266
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=68.59 E-value=32 Score=29.50 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHhhcc
Q 045901 100 LMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVYIQD 168 (171)
Q Consensus 100 ~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~i~~ 168 (171)
.+..++-.+..|+-.|....+....+.|..+ + ++|+...+...++-++|.+++..++-+++.
T Consensus 335 i~ivf~lif~eGLlGGa~YVNtF~~I~~~~~---~----~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 335 IWIVFVLIFYEGLLGGASYVNTFYRISEEVP---P----EDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhcCC---H----HHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3444444567888888888888887777532 2 237888888888888998888877666554
No 267
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=61.87 E-value=8.8 Score=31.57 Aligned_cols=100 Identities=21% Similarity=0.303 Sum_probs=64.1
Q ss_pred HHHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHH---------hhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC
Q 045901 9 NMILYLCREYNMETTAATNVLFIWTAATNFVPILGAFL---------ADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 9 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~l---------aDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~ 79 (171)
.+.+|++ +.|.++...++++..-..+..+..++-|.. -||+ |||+. .+.+|.++.+++ +|.
T Consensus 39 Ylllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~------wh~~gt~lVslS--f~~ 108 (412)
T KOG4830|consen 39 YLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMS------WHLIGTVLVSLS--FPM 108 (412)
T ss_pred HHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceee------eeecccEEEEEe--chh
Confidence 3557776 778999999999998889999999888744 4787 99975 455565544333 232
Q ss_pred CCCC-cccccccCCCCcc--chhHHHHHHHHHHHHHhccccccchh
Q 045901 80 EKPP-VCDQMRSGCESAT--ASQLMLLYSAFGLMSLGGGSIRASSL 122 (171)
Q Consensus 80 ~~~~-~~~~~~~~~~~~~--~~~~~~~~~~l~l~g~g~G~~~~~~~ 122 (171)
.... .| -.|.... ..+..++.+++..+++|.+..+-...
T Consensus 109 ifg~a~i----F~~~~~~s~vanlglyaialvVFgv~~A~~ke~te 150 (412)
T KOG4830|consen 109 IFGFAKI----FLCKSTTSEVANLGLYAIALVVFGVGWASVKESTE 150 (412)
T ss_pred hcCceeE----EeeccHHHHHHHhHHHHHHhheeeeeeecccccHH
Confidence 1110 00 0122111 13556677888889999888766555
No 268
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=59.86 E-value=59 Score=24.07 Aligned_cols=91 Identities=16% Similarity=0.139 Sum_probs=47.6
Q ss_pred HHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccccchhhh
Q 045901 45 FLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIRASSLVF 124 (171)
Q Consensus 45 ~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~ 124 (171)
.++||. .||+.+.+.+=..+|...+...-.+-.- ...+.| .+..+++.+.++++|.-++ .+..
T Consensus 56 ~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~~---------~~~dvP---~~~~~~~S~~~Fg~gllGi---sYGi 118 (153)
T PF11947_consen 56 VVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKSR---------QIVDVP---PWAVLLVSLVFFGLGLLGI---SYGI 118 (153)
T ss_pred HHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHhc---------cccccC---chHHHHHHHHHHHHHHHhh---hhhh
Confidence 468998 5556666666666666555443211000 000111 2444555555555554332 2222
Q ss_pred hhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 045901 125 GADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLS 159 (171)
Q Consensus 125 ~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~ 159 (171)
++..-+++. -+++.+|-..-.|++-+.-
T Consensus 119 lSaSWD~~r-------~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 119 LSASWDPER-------EGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred cccccCCCC-------CCCcccHHHHHHhHHHHHH
Confidence 244444332 3889999989999887653
No 269
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=55.47 E-value=64 Score=22.09 Aligned_cols=39 Identities=8% Similarity=-0.128 Sum_probs=23.2
Q ss_pred HHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHH
Q 045901 30 FIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGM 68 (171)
Q Consensus 30 ~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~ 68 (171)
....+...+...+.|..-|+.++-.+...+..++..++.
T Consensus 49 G~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 49 GWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 333444555555677777888787776655555544443
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=55.27 E-value=55 Score=27.00 Aligned_cols=69 Identities=17% Similarity=0.363 Sum_probs=51.3
Q ss_pred ccHHHHHHHhhHhhCCC-hHHHHH----HHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 045901 5 GLMPNMILYLCREYNME-TTAATN----VLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFT 74 (171)
Q Consensus 5 gv~~~l~~yl~~~lg~s-~~~a~~----~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~ 74 (171)
++.+++..+..+++.-+ +.+-.. .......++.++..+.+++.|++ |-.....++.+...++.+.....
T Consensus 49 ~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 49 GIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp CCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHHhC
Confidence 57789999999988765 444443 34444567777777889999998 99999999998888887766544
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=52.83 E-value=1.3e+02 Score=25.99 Aligned_cols=118 Identities=9% Similarity=0.031 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHhhhccCch-hHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHH
Q 045901 24 AATNVLFIWTAATNFVPILGAFLADSCMGRY-PMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLML 102 (171)
Q Consensus 24 ~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~-~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (171)
-.-.+...|..+-.++..+..|.- .- .+| +.+.+..+.-.+-.-++.+++.-|..+ -...-. +-+.
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p-~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~----------~p~~~~-~d~~ 374 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WP-DEDSRWLPILSFLRVLFIPLFLLCNYPQRSR----------LPVFFP-GDAY 374 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-ee-CCCccchHHHHHHHHHHHHHHHHhcCCcccc----------CCeeec-ccHH
Confidence 444566777777777776554431 11 222 134444444443333333333111000 000001 2244
Q ss_pred HHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 103 LYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 103 ~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
.++-.+++|+..|-..+....+..+..+ ++| |+.+-++...+.++|-.+|..
T Consensus 375 ~~~~~~l~gltnGy~~s~~m~~~p~~v~---~~e----~e~aG~~~~~~l~~Gl~~Gs~ 426 (437)
T TIGR00939 375 FIILMLLFGFSNGYLGSLSMCLAPRQVD---PHE----REVAGALMVIFLLVGLALGAV 426 (437)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCCCCC---HHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 5555778999999988887777766643 222 344444545566666555544
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=50.31 E-value=1e+02 Score=26.65 Aligned_cols=84 Identities=12% Similarity=0.105 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHH
Q 045901 25 ATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLY 104 (171)
Q Consensus 25 a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (171)
=|.+-.+..+.+.++.+..|++..++ .+..-+.++..-..-+..++..+. ..+.+..+
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~S~l~a~~L~lm~~---------------------t~~Iwv~Y 344 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVFSLLQAGLLFLMSF---------------------TGNIWVCY 344 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHHHHHHHHHHHHHHH---------------------hhHHHHHH
Confidence 35566667778888899999997776 887666655555444443333222 22677788
Q ss_pred HHHHHHHHhccccccchhhhhhhcCC
Q 045901 105 SAFGLMSLGGGSIRASSLVFGADQLD 130 (171)
Q Consensus 105 ~~l~l~g~g~G~~~~~~~~~~ad~~~ 130 (171)
++.++.....-+..+.+..=+|..+.
T Consensus 345 ~~yIif~~~y~fliTiA~~qIA~~l~ 370 (412)
T PF01770_consen 345 AGYIIFRSLYMFLITIASFQIAKNLS 370 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88888888888888887776776654
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=47.04 E-value=1.8e+02 Score=25.70 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHHH-HHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC---CCCCcccccccCCCCc-
Q 045901 21 ETTAATNVLFIWTA-ATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ---EKPPVCDQMRSGCESA- 95 (171)
Q Consensus 21 s~~~a~~~~~~~~~-~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~---~~~~~~~~~~~~~~~~- 95 (171)
.++....+-..... .+.+..++-.+++||+ +|.|+..+....+..-+.+.++-- +|. ++|+.-.+.......+
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~~~~~ 133 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKLLAILPPG 133 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhhccch
Confidence 33444444443333 4556677899999998 999988877776665555554432 343 3333211000000000
Q ss_pred --------cchhHHHHHHHHHHHHHhcccccc--chhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 045901 96 --------TASQLMLLYSAFGLMSLGGGSIRA--SSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIVY 165 (171)
Q Consensus 96 --------~~~~~~~~~~~l~l~g~g~G~~~~--~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~~ 165 (171)
..+....+++.- =-+|...- .--.+.-|.+..+ +..++|..+....|+|.+++..+..+
T Consensus 134 ~~~~i~~~~~Wt~slfYv~a----ElwgsvvlSlLFW~fAN~itt~~-------eAKRfYpl~g~ganigli~sG~~~~~ 202 (491)
T PF03219_consen 134 FKGFIAMFRNWTFSLFYVMA----ELWGSVVLSLLFWGFANEITTVE-------EAKRFYPLFGLGANIGLIFSGQLTSY 202 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhcCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111222111 11111100 1123334555321 25789999999999999999888877
Q ss_pred hcc
Q 045901 166 IQD 168 (171)
Q Consensus 166 i~~ 168 (171)
+.+
T Consensus 203 ~~~ 205 (491)
T PF03219_consen 203 FSS 205 (491)
T ss_pred HHH
Confidence 765
No 274
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=44.94 E-value=37 Score=23.60 Aligned_cols=53 Identities=19% Similarity=0.273 Sum_probs=44.8
Q ss_pred CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 045901 20 METTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWF 73 (171)
Q Consensus 20 ~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~ 73 (171)
+.+..++=+...+.....+.+++.+|..|+. -+-+-=.++..++.+|..+..+
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 4457788899999999999999999999998 7778888888888888776544
No 275
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=43.10 E-value=1.1e+02 Score=26.05 Aligned_cols=65 Identities=17% Similarity=0.141 Sum_probs=37.4
Q ss_pred hhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHHHHHHhccccc
Q 045901 39 VPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFGLMSLGGGSIR 118 (171)
Q Consensus 39 ~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~g~g~G~~~ 118 (171)
+.++.+.+-.+ +|-|.++.++...+.+-. +.++ .| ++..+.-+-...|.|.+-+.
T Consensus 74 s~m~~~~~Ir~-~g~K~tm~lav~~Y~lyi-----A~Nl---~p----------------r~~tlVPa~~~~G~aa~p~W 128 (390)
T KOG3097|consen 74 SSMFMPLLIRF-LGTKWTMVLAVFPYALYI-----AANL---EP----------------RYETLVPAGLVLGMAAGPIW 128 (390)
T ss_pred HHHHHHHHHHH-HhhHHHHHHHHHHHHHHH-----Hhhc---ch----------------hHHhhccHHHhhcccccccc
Confidence 33444455555 599999998888776332 2211 11 33334444456777777776
Q ss_pred cchhhhhhhc
Q 045901 119 ASSLVFGADQ 128 (171)
Q Consensus 119 ~~~~~~~ad~ 128 (171)
..-.+++++.
T Consensus 129 ~SkgtYlT~~ 138 (390)
T KOG3097|consen 129 ASKGTYLTPM 138 (390)
T ss_pred ccCcceecHH
Confidence 6666655544
No 276
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=43.04 E-value=91 Score=26.78 Aligned_cols=81 Identities=19% Similarity=0.190 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHH
Q 045901 25 ATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLY 104 (171)
Q Consensus 25 a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (171)
.+.+..+-...+.+.-+.+-|.-+|. .-+.=+.+..++..+|.++.+++. +.+.=+
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~~-----------------------~v~~~l 116 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFSP-----------------------SVWVRL 116 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeecc-----------------------chhHHH
Confidence 34577777788888889999999986 645556666677777877665543 345566
Q ss_pred HHHHHHHHhccccccchhhhhhhcCC
Q 045901 105 SAFGLMSLGGGSIRASSLVFGADQLD 130 (171)
Q Consensus 105 ~~l~l~g~g~G~~~~~~~~~~ad~~~ 130 (171)
+|.++.+++.|.......++.+ .++
T Consensus 117 ~Gv~las~ssg~GE~tfL~lt~-~y~ 141 (402)
T PF02487_consen 117 LGVVLASLSSGLGEVTFLSLTH-FYG 141 (402)
T ss_pred HHHHHHhhhhhhhHHHHHHHHH-hcC
Confidence 8888999999999988888755 454
No 277
>PRK02237 hypothetical protein; Provisional
Probab=41.76 E-value=68 Score=22.33 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 045901 23 TAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWF 73 (171)
Q Consensus 23 ~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~ 73 (171)
.+++=+...+.+...+.+++.+|..|+. -+-+-=.++..+..+|..+..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhee
Confidence 5688899999999999999999999998 7777778888888888765544
No 278
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=41.11 E-value=95 Score=27.62 Aligned_cols=84 Identities=12% Similarity=0.108 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHH
Q 045901 26 TNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYS 105 (171)
Q Consensus 26 ~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (171)
|.+-.+....+.++.+..|++-.++ .|.--+.++..-..-|-+++ +++. +++.+.-++
T Consensus 301 G~veA~~tllga~~a~~ag~~~~~w-~~~~~l~l~v~s~~~~gll~-~m~~--------------------t~~Iw~~Y~ 358 (511)
T TIGR00806 301 GAVDAASTLLGAITSFIAGFVNIRW-ARWSKLLIAVVSAIQAGLVF-WMSQ--------------------SHDIWVLYV 358 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHHHhh-hhhc--------------------ccchHHHHH
Confidence 4455566677888899999998886 66544554444434333322 2221 226778888
Q ss_pred HHHHHHHhccccccchhhhhhhcCCC
Q 045901 106 AFGLMSLGGGSIRASSLVFGADQLDK 131 (171)
Q Consensus 106 ~l~l~g~g~G~~~~~~~~~~ad~~~~ 131 (171)
+-+++.....+..+.+..-+|..+.+
T Consensus 359 ~yvlf~~~y~flitia~~~iA~~L~~ 384 (511)
T TIGR00806 359 TYVLFRGIYQFLVPIATFQIASSLSK 384 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88888888888888888777776653
No 279
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=40.43 E-value=68 Score=24.46 Aligned_cols=21 Identities=14% Similarity=0.063 Sum_probs=17.0
Q ss_pred HHHHHHhhhhhhhHHHhhhcc
Q 045901 31 IWTAATNFVPILGAFLADSCM 51 (171)
Q Consensus 31 ~~~~~~~i~~~~~G~laDr~~ 51 (171)
.|..+-.+.+.+.||++||..
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~ 110 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIR 110 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhh
Confidence 456677788889999999983
No 280
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=40.35 E-value=87 Score=19.16 Aligned_cols=46 Identities=20% Similarity=0.266 Sum_probs=18.2
Q ss_pred CCChHHHHHHHHHHHHHHhhhhhhhHHHhhhc---cCchhHHHHHHHHH
Q 045901 19 NMETTAATNVLFIWTAATNFVPILGAFLADSC---MGRYPMIGFGCIIS 64 (171)
Q Consensus 19 g~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~---~Gr~~~i~~~~~l~ 64 (171)
+.+..+.-.....+...+.+.+.++-++..+. ++++--.+.+.++.
T Consensus 16 ~~~~~~~~~~~~~ig~~~~~~~~~G~~~G~~~~~~~~~~~~~igg~iLi 64 (67)
T PF02659_consen 16 GISRRIILLIALIIGIFQFIMPLLGLLLGRRLGRFIGSYAEWIGGIILI 64 (67)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44422233333334444444444433333332 35554444444433
No 281
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=40.11 E-value=1.9e+02 Score=25.06 Aligned_cols=60 Identities=10% Similarity=0.053 Sum_probs=41.8
Q ss_pred HHHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHH
Q 045901 10 MILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVL 70 (171)
Q Consensus 10 l~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~l 70 (171)
.++|+.+-+.-+---.+..-.+-.+...++.+.-|..-||. .|.|.+..+.+..-++..+
T Consensus 25 ~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv~~ 84 (432)
T PF06963_consen 25 VPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSVAA 84 (432)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHHHH
Confidence 45666655443444455555556677777788889999998 9999998887776655444
No 282
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=39.28 E-value=61 Score=22.74 Aligned_cols=23 Identities=17% Similarity=0.404 Sum_probs=19.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhh
Q 045901 53 RYPMIGFGCIISLLGMVLLWFTA 75 (171)
Q Consensus 53 r~~~i~~~~~l~~lg~~ll~~~~ 75 (171)
++|++.++..+..+|.+++....
T Consensus 40 pwK~I~la~~Lli~G~~li~~g~ 62 (115)
T PF05915_consen 40 PWKSIALAVFLLIFGTVLIIIGL 62 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999887654
No 283
>PRK11469 hypothetical protein; Provisional
Probab=39.26 E-value=1.2e+02 Score=23.04 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=32.4
Q ss_pred hCCChHHHHHHHHHHHHHHhhhhh-hhHHHhhhccCchhHHHHHHHHHHHHHHHH
Q 045901 18 YNMETTAATNVLFIWTAATNFVPI-LGAFLADSCMGRYPMIGFGCIISLLGMVLL 71 (171)
Q Consensus 18 lg~s~~~a~~~~~~~~~~~~i~~~-~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll 71 (171)
+|.+......+............. +|..+++++ |||.-+.-+.++..+|.-++
T Consensus 129 ~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~-g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 129 LQVNIIATALAIGCATLIMSTLGMMVGRFIGSII-GKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 344444444455444444444343 444555554 99999999999998887654
No 284
>COG2119 Predicted membrane protein [Function unknown]
Probab=38.04 E-value=1.8e+02 Score=22.28 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=29.0
Q ss_pred HHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHH
Q 045901 30 FIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGM 68 (171)
Q Consensus 30 ~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~ 68 (171)
......+.+.-+.|.+++||. ..|++-.++.+++.+-.
T Consensus 141 lg~~l~s~laVl~G~~ia~ki-~~r~l~~~aallFl~fa 178 (190)
T COG2119 141 LGMILASVLAVLLGKLIAGKL-PERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHH
Confidence 345677888888999999997 88888877776665443
No 285
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=36.07 E-value=1.1e+02 Score=22.38 Aligned_cols=25 Identities=12% Similarity=0.049 Sum_probs=18.6
Q ss_pred HHHHHHHhhhhhhhHHHhhhccCchh
Q 045901 30 FIWTAATNFVPILGAFLADSCMGRYP 55 (171)
Q Consensus 30 ~~~~~~~~i~~~~~G~laDr~~Gr~~ 55 (171)
..|..+-.+.+.+.|++.||. .|++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~-~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERL-KRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhc-cccc
Confidence 345667778888899999996 6653
No 286
>PRK10692 hypothetical protein; Provisional
Probab=35.71 E-value=52 Score=21.97 Aligned_cols=22 Identities=23% Similarity=0.297 Sum_probs=16.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHH
Q 045901 52 GRYPMIGFGCIISLLGMVLLWF 73 (171)
Q Consensus 52 Gr~~~i~~~~~l~~lg~~ll~~ 73 (171)
-||.+..++-+++.+|.+++..
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~ 23 (92)
T PRK10692 2 KRKNASLLGNVLMGLGLVVMVV 23 (92)
T ss_pred cchhhHHHhhHHHHHHHHHHHH
Confidence 4777888888888888777654
No 287
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=35.53 E-value=3.2e+02 Score=24.30 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=73.3
Q ss_pred CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCch-------hHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCC
Q 045901 20 METTAATNVLFIWTAATNFVPILGAFLADSCMGRY-------PMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGC 92 (171)
Q Consensus 20 ~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~-------~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~ 92 (171)
.++.+-..++..+ -.+..++..++--+. +|+ .-+-+++.+...+++++..... ..-.|
T Consensus 324 vp~~~fQslNp~~---Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~-~~~~~---------- 388 (498)
T COG3104 324 VPPAWFQSLNPFF---IILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGI-WFGGP---------- 388 (498)
T ss_pred cCHHHHHhhCHHH---HHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHH-hhcCC----------
Confidence 5555555555544 334444555555552 332 2355778888888877766521 11000
Q ss_pred CCccchhHHHHHHHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 045901 93 ESATASQLMLLYSAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSATFIV 164 (171)
Q Consensus 93 ~~~~~~~~~~~~~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~~~~ 164 (171)
....+.+.+..+.+++++|.=++.|...++++..-|+ ...+..+..+......|..++..+.+
T Consensus 389 --~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~-------~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 389 --SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPP-------ALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred --CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChH-------HHHHHHHHHHHHHHHHHHHhhceecc
Confidence 0112456778888999999999999999888776432 23456677777777777777665554
No 288
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=34.91 E-value=2.3e+02 Score=22.35 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=45.4
Q ss_pred HHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCC
Q 045901 12 LYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQ 79 (171)
Q Consensus 12 ~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~ 79 (171)
..+.+..+.+..+.+..+..-..... ++.-++.+|. +.++-...|..+..+|...+..+-..|.
T Consensus 120 ~l~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~-~~~~p~~LG~~Mi~~GlyfLl~aliiPn 183 (224)
T PF09930_consen 120 MLLAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRL-KKPYPIILGNFMIFLGLYFLLSALIIPN 183 (224)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 44556789999999988865544444 6777888886 8677778888888888776644444554
No 289
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=34.52 E-value=1.2e+02 Score=19.00 Aligned_cols=44 Identities=9% Similarity=-0.088 Sum_probs=34.1
Q ss_pred HHHhhHhhCCChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCch
Q 045901 11 ILYLCREYNMETTAATNVLFIWTAATNFVPILGAFLADSCMGRY 54 (171)
Q Consensus 11 ~~yl~~~lg~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~ 54 (171)
.+-+.--++.+..+++.+.-.......+=..+.-|+-||...|+
T Consensus 22 ~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r~ 65 (67)
T PF05232_consen 22 VPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPRQ 65 (67)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34444467888888888888888888888888999999986553
No 290
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=34.19 E-value=2.9e+02 Score=23.38 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=32.7
Q ss_pred HhhCCChHHHHHHHHHHH-HHHhhhhh----hhHHHhhhc-cCchhHHHHHHHHHHHHHHHH
Q 045901 16 REYNMETTAATNVLFIWT-AATNFVPI----LGAFLADSC-MGRYPMIGFGCIISLLGMVLL 71 (171)
Q Consensus 16 ~~lg~s~~~a~~~~~~~~-~~~~i~~~----~~G~laDr~-~Gr~~~i~~~~~l~~lg~~ll 71 (171)
++.++++...+.+..... ..+.+..+ ++-+++|+. .|++.-...+..+..++.++.
T Consensus 151 ~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 151 NKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 456888777666655443 33444444 444555554 145666777777777776543
No 291
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=33.88 E-value=1.9e+02 Score=21.27 Aligned_cols=32 Identities=19% Similarity=-0.146 Sum_probs=20.9
Q ss_pred HHHHhhhhhhhHHHhhhccCchhHHHHHHHHHH
Q 045901 33 TAATNFVPILGAFLADSCMGRYPMIGFGCIISL 65 (171)
Q Consensus 33 ~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~ 65 (171)
.+.-.++-+++.+++|+. ++-..+.+...+..
T Consensus 82 Yi~PL~~l~v~~~La~~L-~~~e~~~~~~~~lg 113 (150)
T COG3086 82 YIFPLVGLFLGAILAQYL-FFSELIVIFGAFLG 113 (150)
T ss_pred HHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHH
Confidence 344455566889999997 77776665444433
No 292
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=31.48 E-value=26 Score=30.85 Aligned_cols=45 Identities=20% Similarity=0.218 Sum_probs=33.9
Q ss_pred ccCCCCccchhHHHHHHHH-HHHHHhccccccchhhhhhhcCCCCC
Q 045901 89 RSGCESATASQLMLLYSAF-GLMSLGGGSIRASSLVFGADQLDKGN 133 (171)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l-~l~g~g~G~~~~~~~~~~ad~~~~~~ 133 (171)
..-|+.....+.+.++.+. +.+|++.-.+.....+.-++++++.+
T Consensus 376 y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~ 421 (488)
T KOG2325|consen 376 YSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRD 421 (488)
T ss_pred chhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCcc
Confidence 3567666666677777664 46888888888899999999998754
No 293
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=30.48 E-value=63 Score=21.46 Aligned_cols=22 Identities=27% Similarity=0.282 Sum_probs=16.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHH
Q 045901 52 GRYPMIGFGCIISLLGMVLLWF 73 (171)
Q Consensus 52 Gr~~~i~~~~~l~~lg~~ll~~ 73 (171)
-||.+..++-+++.+|.+.+..
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~ 23 (89)
T PF10762_consen 2 KRKNAFLLGNVLMGLGMVVMVG 23 (89)
T ss_pred CchhhHHHhhHHHHHhHHHHHH
Confidence 4777888888888888776654
No 294
>PF08551 DUF1751: Eukaryotic integral membrane protein (DUF1751); InterPro: IPR013861 This entry is found in eukaryotic integral membrane proteins. Q12239 from SWISSPROT, a Saccharomyces cerevisiae (Baker's yeast) protein, has been shown to localise COP II vesicles [].
Probab=28.14 E-value=1.9e+02 Score=19.42 Aligned_cols=40 Identities=10% Similarity=0.221 Sum_probs=29.7
Q ss_pred HHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHH
Q 045901 34 AATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWF 73 (171)
Q Consensus 34 ~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~ 73 (171)
+.+.+.-+.+|..-+|.||.|+.+..-.+...+..++..+
T Consensus 25 l~~~~~l~~~g~~lE~~WGs~E~lkFi~vv~~~tnl~~~~ 64 (99)
T PF08551_consen 25 LFSLLTLFYGGRYLEPIWGSREFLKFILVVNVITNLLTFL 64 (99)
T ss_pred HHHHHHHHHhhHHHHHhcChHHHHHHHHHHHHHhHHHHHH
Confidence 3444555578999999999999999888877776655443
No 295
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=27.68 E-value=1.5e+02 Score=25.57 Aligned_cols=80 Identities=10% Similarity=0.063 Sum_probs=48.7
Q ss_pred HHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCccchhHHHHHHHHH
Q 045901 29 LFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESATASQLMLLYSAFG 108 (171)
Q Consensus 29 ~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 108 (171)
-.+......++.+..|++.-++ -|+.-+.++..-...+-.+...+. +++.+..+++-+
T Consensus 277 eAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~---------------------t~~Iw~~Ya~yv 334 (433)
T KOG3810|consen 277 EAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ---------------------TQHIWVCYAGYV 334 (433)
T ss_pred HHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc---------------------ccceehhhhhHH
Confidence 3445567778888999998886 776444444332222222222221 234566777777
Q ss_pred HHHHhccccccchhhhhhhcCC
Q 045901 109 LMSLGGGSIRASSLVFGADQLD 130 (171)
Q Consensus 109 l~g~g~G~~~~~~~~~~ad~~~ 130 (171)
+...-..+..+.+..-+|..++
T Consensus 335 lfr~~y~l~itiA~~~iA~nL~ 356 (433)
T KOG3810|consen 335 LFRVIYQLTITIATFQIARNLS 356 (433)
T ss_pred HHHhhHhhhhhHHHHHHHHhhh
Confidence 7777777777777666666554
No 296
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.75 E-value=1e+02 Score=28.49 Aligned_cols=33 Identities=18% Similarity=0.101 Sum_probs=23.5
Q ss_pred hhHHHhh---hccCchhHHHHHHHHHHHHHHHHHHh
Q 045901 42 LGAFLAD---SCMGRYPMIGFGCIISLLGMVLLWFT 74 (171)
Q Consensus 42 ~~G~laD---r~~Gr~~~i~~~~~l~~lg~~ll~~~ 74 (171)
+++-++| ++-||.|-+.++.+++.++++..-+.
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444554 55567899999999999888766554
No 297
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=21.90 E-value=1.8e+02 Score=16.87 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=20.6
Q ss_pred HhhhhhhhHHHhhhccCc-hhHHHHHHHHHHHHHHHH
Q 045901 36 TNFVPILGAFLADSCMGR-YPMIGFGCIISLLGMVLL 71 (171)
Q Consensus 36 ~~i~~~~~G~laDr~~Gr-~~~i~~~~~l~~lg~~ll 71 (171)
..++++++||+.+.+ |. ..-...+.+...+|..++
T Consensus 4 GiiGa~vGg~l~~~l-g~~~~~~~~~~i~aviGAiil 39 (48)
T PF04226_consen 4 GIIGAFVGGWLFGLL-GINGGGSWGSFIVAVIGAIIL 39 (48)
T ss_pred ehHHHHHHHHHHHHh-cccCCchHHHHHHHHHHHHHH
Confidence 356788899998886 65 223334444444554443
No 298
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=21.83 E-value=28 Score=28.27 Aligned_cols=113 Identities=7% Similarity=0.107 Sum_probs=3.4
Q ss_pred HHHHHHHHHhhhhhhhHHHhhhccC--chhHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccccCCCCcc-chhHHHHH
Q 045901 28 VLFIWTAATNFVPILGAFLADSCMG--RYPMIGFGCIISLLGMVLLWFTAIFPQEKPPVCDQMRSGCESAT-ASQLMLLY 104 (171)
Q Consensus 28 ~~~~~~~~~~i~~~~~G~laDr~~G--r~~~i~~~~~l~~lg~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 104 (171)
+...|..+-.++..+.+|. ++ - ++|.+.+..+.-.+-.-++...+.-|..+ ..+. -.+-+.++
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~--~~-~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~-----------~~~~~~~~d~~~~ 252 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWP--RW-PGPSPRWLWILSLLRFLFIPLFLLCNVQPRPR-----------YLPVLFNSDAWFI 252 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhccee--Ee-cccccccHHHHHHHHHHHHHHHHHHHhhcccc-----------cCCCcccchHHHH
Confidence 4567888888888888874 22 2 33333333333332222222222111100 0000 01224455
Q ss_pred HHHHHHHHhccccccchhhhhhhcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhH
Q 045901 105 SAFGLMSLGGGSIRASSLVFGADQLDKGNGAKNAGALQSYFSWYYVSIAAGSMLSAT 161 (171)
Q Consensus 105 ~~l~l~g~g~G~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~~~y~~~niG~~i~~~ 161 (171)
+-.+++|+..|-..+....+..+..++ +| ++.+-++.....++|-.+|..
T Consensus 253 i~~~l~g~TNGyl~tl~m~~~p~~v~~---~e----~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 253 ILMLLFGFTNGYLSTLAMMYAPKSVSP---EE----RELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp --------------HHHH---------------------------------------
T ss_pred HHHHHHHHccchhhhceeeeCCCcCCH---HH----HHHHHHHHHHHHHHHHHHHHH
Confidence 566789999999988888777776652 22 233333333455555555543
No 299
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=21.40 E-value=1.2e+02 Score=28.04 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=23.0
Q ss_pred hhHHHh---hhccCchhHHHHHHHHHHHHHHHHHHh
Q 045901 42 LGAFLA---DSCMGRYPMIGFGCIISLLGMVLLWFT 74 (171)
Q Consensus 42 ~~G~la---Dr~~Gr~~~i~~~~~l~~lg~~ll~~~ 74 (171)
+++-++ |++-||.|-+.+..+++.++++...+.
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll 77 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELL 77 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444 455678888889988888888765544
No 300
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.17 E-value=4.5e+02 Score=22.46 Aligned_cols=54 Identities=19% Similarity=0.335 Sum_probs=43.9
Q ss_pred CChHHHHHHHHHHHHHHhhhhhhhHHHhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 045901 20 METTAATNVLFIWTAATNFVPILGAFLADSCMGRYPMIGFGCIISLLGMVLLWFT 74 (171)
Q Consensus 20 ~s~~~a~~~~~~~~~~~~i~~~~~G~laDr~~Gr~~~i~~~~~l~~lg~~ll~~~ 74 (171)
+--.+.+..+.+|.+...+.+.+.|.|..+. ||-.....+.+.+..-...+-+.
T Consensus 307 ~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~-gr~~~~v~gavv~l~li~~~~~w 360 (390)
T KOG3097|consen 307 LGVSRIGFAMACFGVGDAVASSLFGLLGKWI-GRPPLLVLGAVVHLLLITILFFW 360 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHHHHHHHHHhc
Confidence 4445678889999999899999999999997 99999999998887655544443
Done!